Query 023390
Match_columns 283
No_of_seqs 277 out of 925
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 05:58:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023390.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023390hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pxz_A Major pollen allergen J 100.0 3.4E-77 1.1E-81 567.9 21.1 230 53-283 1-232 (346)
2 3zsc_A Pectate trisaccharide-l 100.0 6.3E-56 2.1E-60 420.9 16.8 188 73-283 9-200 (340)
3 3vmv_A Pectate lyase; polysacc 100.0 3.5E-52 1.2E-56 393.3 16.0 176 75-283 2-210 (326)
4 2qy1_A Pectate lyase II; GAG l 100.0 2.9E-52 9.8E-57 394.2 13.0 175 76-283 1-210 (330)
5 1pcl_A Pectate lyase E; lyase 100.0 1.3E-50 4.5E-55 386.4 19.4 192 72-283 3-233 (355)
6 1pe9_A Pectate lyase A; parall 100.0 2.6E-51 9E-56 392.0 14.5 188 76-283 13-244 (361)
7 1vbl_A Pectate lyase 47; PL 47 100.0 1.8E-49 6.1E-54 385.4 17.0 189 75-283 9-288 (416)
8 2o04_A Pectate lyase, PL; hexa 100.0 2.4E-49 8.2E-54 382.8 15.9 188 75-283 9-282 (399)
9 1idk_A Pectin lyase A; signal, 100.0 3.7E-49 1.3E-53 376.9 16.2 175 72-283 2-239 (359)
10 1qcx_A Pectin lyase B; beta-he 100.0 5.6E-47 1.9E-51 361.9 16.1 174 73-283 3-239 (359)
11 1air_A Pectate lyase C, PELC; 100.0 1.2E-42 4.1E-47 331.4 13.9 171 76-283 3-221 (353)
12 3gqn_A Preneck appendage prote 98.4 1.2E-06 4.2E-11 90.3 12.3 120 136-274 107-244 (772)
13 1bhe_A PEHA, polygalacturonase 98.4 2.5E-06 8.4E-11 81.0 13.1 95 157-274 174-273 (376)
14 2iq7_A Endopolygalacturonase; 98.4 5.1E-06 1.8E-10 78.0 14.0 102 157-274 123-224 (339)
15 3gq8_A Preneck appendage prote 98.3 2.8E-06 9.5E-11 85.9 12.1 119 136-274 107-244 (609)
16 1ia5_A Polygalacturonase; glyc 98.3 7.2E-06 2.5E-10 77.0 14.1 102 157-274 127-228 (339)
17 3jur_A EXO-poly-alpha-D-galact 98.3 3.9E-06 1.3E-10 82.0 12.6 95 157-274 213-320 (448)
18 2iq7_A Endopolygalacturonase; 98.3 1.3E-05 4.3E-10 75.3 14.3 86 159-275 102-196 (339)
19 1ia5_A Polygalacturonase; glyc 98.2 1.7E-05 6E-10 74.4 14.7 86 159-275 106-200 (339)
20 2uvf_A Exopolygalacturonase; G 98.2 1E-05 3.4E-10 81.7 13.5 121 118-274 329-459 (608)
21 1hg8_A Endopolygalacturonase; 98.2 1.9E-05 6.5E-10 74.5 14.5 109 157-274 127-236 (349)
22 1nhc_A Polygalacturonase I; be 98.2 1.4E-05 4.9E-10 74.9 13.4 101 157-274 123-223 (336)
23 1nhc_A Polygalacturonase I; be 98.2 2.3E-05 7.7E-10 73.5 14.4 84 159-274 102-194 (336)
24 1czf_A Polygalacturonase II; b 98.2 2.1E-05 7.2E-10 74.7 13.3 101 157-274 149-249 (362)
25 1rmg_A Rgase A, rhamnogalactur 98.1 2.4E-05 8.2E-10 75.6 13.4 70 200-274 175-244 (422)
26 1czf_A Polygalacturonase II; b 98.1 1.8E-05 6.1E-10 75.2 11.9 108 136-275 96-221 (362)
27 1rmg_A Rgase A, rhamnogalactur 98.0 6.9E-05 2.4E-09 72.4 14.3 105 139-274 106-217 (422)
28 1k5c_A Endopolygalacturonase; 98.0 6.8E-05 2.3E-09 70.4 12.6 100 157-274 119-219 (335)
29 1hg8_A Endopolygalacturonase; 97.9 0.00022 7.6E-09 67.2 14.8 107 136-274 70-207 (349)
30 1bhe_A PEHA, polygalacturonase 97.9 0.00012 4E-09 69.4 12.9 93 158-275 152-249 (376)
31 1ru4_A Pectate lyase, PEL9A; p 97.8 0.00042 1.4E-08 66.7 14.7 132 88-245 12-172 (400)
32 1k5c_A Endopolygalacturonase; 97.7 0.00023 8E-09 66.8 10.9 106 136-275 67-193 (335)
33 1h80_A IOTA-carrageenase; hydr 97.7 0.00055 1.9E-08 67.2 13.8 105 159-274 134-243 (464)
34 2pyg_A Poly(beta-D-mannuronate 97.7 0.0011 3.7E-08 61.7 15.2 82 164-249 132-220 (377)
35 1ogo_X Dextranase; hydrolase, 97.6 0.00045 1.5E-08 69.5 12.7 102 164-274 331-441 (574)
36 3jur_A EXO-poly-alpha-D-galact 97.5 0.00076 2.6E-08 65.8 12.2 92 159-273 192-290 (448)
37 3gq8_A Preneck appendage prote 97.3 0.0018 6.2E-08 65.5 11.8 90 164-276 181-274 (609)
38 3gqn_A Preneck appendage prote 97.2 0.0021 7.3E-08 66.4 12.4 90 164-276 181-274 (772)
39 1ogo_X Dextranase; hydrolase, 97.2 0.0019 6.4E-08 65.0 11.7 146 107-273 219-412 (574)
40 1dbg_A Chondroitinase B; beta 97.2 0.0029 1E-07 62.7 12.7 121 110-245 33-169 (506)
41 1xg2_A Pectinesterase 1; prote 97.2 0.0038 1.3E-07 58.3 12.7 99 110-228 17-136 (317)
42 1gq8_A Pectinesterase; hydrola 97.1 0.0074 2.5E-07 56.4 14.0 99 110-228 21-140 (319)
43 1x0c_A Isopullulanase; glycosi 97.1 0.0039 1.3E-07 62.3 12.7 101 163-274 290-403 (549)
44 2uvf_A Exopolygalacturonase; G 97.1 0.0069 2.3E-07 61.0 13.8 94 157-273 380-487 (608)
45 2nsp_A Pectinesterase A; micha 97.0 0.0063 2.2E-07 57.4 12.5 112 110-228 20-158 (342)
46 3uw0_A Pectinesterase; right-h 96.9 0.012 3.9E-07 56.2 13.4 126 110-244 46-198 (364)
47 1pxz_A Major pollen allergen J 96.5 0.035 1.2E-06 52.4 13.1 66 156-243 149-222 (346)
48 1x0c_A Isopullulanase; glycosi 96.5 0.019 6.4E-07 57.4 11.7 51 210-273 318-374 (549)
49 2inu_A Insulin fructotransfera 96.5 0.0059 2E-07 59.1 7.7 111 122-245 59-204 (410)
50 1qcx_A Pectin lyase B; beta-he 96.0 0.065 2.2E-06 50.8 12.4 67 201-275 123-198 (359)
51 3zsc_A Pectate trisaccharide-l 95.8 0.23 7.8E-06 46.9 14.9 68 157-246 116-194 (340)
52 1h80_A IOTA-carrageenase; hydr 95.7 0.091 3.1E-06 51.5 12.2 87 160-273 170-268 (464)
53 2pyg_A Poly(beta-D-mannuronate 95.1 0.13 4.5E-06 47.5 10.5 86 158-245 149-246 (377)
54 1idk_A Pectin lyase A; signal, 94.7 0.36 1.2E-05 45.7 12.4 84 142-246 139-233 (359)
55 1dbg_A Chondroitinase B; beta 93.7 0.34 1.2E-05 47.9 10.6 20 159-179 120-139 (506)
56 2inu_A Insulin fructotransfera 93.5 0.21 7.2E-06 48.3 8.4 88 158-251 185-280 (410)
57 1ru4_A Pectate lyase, PEL9A; p 92.9 0.78 2.7E-05 43.8 11.3 103 140-246 114-230 (400)
58 2x6w_A Tail spike protein; vir 92.8 0.15 5.1E-06 51.5 6.4 45 200-254 228-274 (600)
59 3vmv_A Pectate lyase; polysacc 92.8 0.95 3.2E-05 42.3 11.5 76 157-245 120-203 (326)
60 2vbk_A Tailspike-protein; vira 92.5 0.67 2.3E-05 45.6 10.3 41 110-151 70-118 (514)
61 1pcl_A Pectate lyase E; lyase 92.2 0.88 3E-05 43.0 10.6 85 157-246 133-227 (355)
62 1vbl_A Pectate lyase 47; PL 47 89.3 1.4 4.8E-05 42.5 9.1 85 157-246 189-282 (416)
63 2o04_A Pectate lyase, PL; hexa 88.6 1.5 5.2E-05 42.0 8.8 85 157-246 183-276 (399)
64 3eqn_A Glucan 1,3-beta-glucosi 88.6 4.6 0.00016 41.9 12.8 31 119-150 89-119 (758)
65 3grh_A YBHC, acyl-COA thioeste 88.2 6.3 0.00022 38.1 12.8 103 110-227 91-250 (422)
66 1air_A Pectate lyase C, PELC; 87.6 3 0.0001 39.3 10.0 81 157-247 130-216 (353)
67 1pe9_A Pectate lyase A; parall 86.8 1.9 6.5E-05 40.8 8.2 85 157-246 143-238 (361)
68 2qy1_A Pectate lyase II; GAG l 84.1 3.8 0.00013 38.1 8.7 79 157-246 113-204 (330)
69 3t9g_A Pectate lyase; PL3, par 78.7 15 0.00051 32.0 9.9 52 196-248 82-133 (196)
70 1ee6_A Pectate lyase; parallel 76.7 11 0.00037 32.9 8.5 47 196-243 78-124 (197)
71 2x6w_A Tail spike protein; vir 67.2 3.6 0.00012 41.6 3.6 61 160-252 180-249 (600)
72 1vib_A Neurotoxin B-IV; hydrox 50.8 1.2 4.2E-05 30.5 -2.1 19 56-74 20-38 (55)
73 1gq8_A Pectinesterase; hydrola 47.8 49 0.0017 30.4 7.5 110 158-275 115-242 (319)
74 1xg2_A Pectinesterase 1; prote 47.4 55 0.0019 30.1 7.8 110 158-275 111-238 (317)
75 2x3h_A K5 lyase, K5A lyase; ba 45.2 1.3E+02 0.0043 28.6 9.8 114 141-255 142-270 (542)
76 2vbk_A Tailspike-protein; vira 31.3 75 0.0026 31.3 6.1 24 202-225 210-234 (514)
77 3t9g_A Pectate lyase; PL3, par 24.5 1.5E+02 0.0051 25.8 6.1 67 162-246 115-181 (196)
78 1ee6_A Pectate lyase; parallel 22.0 3.1E+02 0.011 23.7 7.7 67 163-247 112-178 (197)
79 3bh1_A UPF0371 protein DIP2346 20.8 62 0.0021 31.6 3.3 36 76-117 159-194 (507)
No 1
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=100.00 E-value=3.4e-77 Score=567.95 Aligned_cols=230 Identities=50% Similarity=0.945 Sum_probs=220.9
Q ss_pred CCCCcceeecCccccccccccccCcccccCCccCCCCCeEEEEcCCCCCCCCCCCchhHHHhhhcCCCeEEEEeeeeEEE
Q 023390 53 GNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIT 132 (283)
Q Consensus 53 ~n~id~cwr~~~~w~~~r~~la~~a~GfG~~ttGG~gG~v~~VT~~~d~d~~~~~pGtLr~av~~~~P~~IvF~~~g~I~ 132 (283)
+||||+||||+|+|+.+||+||+||+|||++||||+||++|+||+++| ++++|+|||||+|+++++|+||+|+++|+|+
T Consensus 1 ~~~~~~c~~~~~~w~~~~~~~~~~a~Gfg~~ttGG~gG~v~~VT~~~d-~~~~~~~GsLr~av~~~~P~~Ivf~~~g~I~ 79 (346)
T 1pxz_A 1 DNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDD-NPVNPTPGTLRYGATREKALWIIFSQNMNIK 79 (346)
T ss_dssp CCTTHHHHHSSCCTTTCGGGGGGCCCGGGTTCCTTTTSEEEEECCCCC-CTTSCCTTSHHHHHHCSSCEEEEESSCEEEC
T ss_pred CCccchhhccCcchhhhhhhcccCCccccCCCcCCCCccEEEECChHH-cccccCcchhHHHhccCCCeEEEEcCCcEEe
Confidence 699999999999999999999999999999999999999999998866 7899999999999999999999999999999
Q ss_pred eCceEEecCCcEEEeeCCceEEeC-CCeEEEEeeccEEEEeeEEEecccCCCcee-ecCCCccccCcCCCCCeEEeeCCc
Q 023390 133 LKEELIMNSFKTIDGRGASVHIAG-GPCITVQYVTNIIIHGINIHDCKRGGNANV-RDSPSHYGWRTISDGDGVSIFGGS 210 (283)
Q Consensus 133 L~~~L~i~snkTI~G~ga~~~I~~-G~~i~i~~a~NVIIrnL~i~~~~~~g~~~i-r~~~~~~g~r~~~~~DaI~I~gs~ 210 (283)
|+++|.|+|||||+|+|++++|.+ |+||+|++++|||||||+|+++.|.+++.| |++++|+|.+...++|||+|++++
T Consensus 80 l~~~l~V~sn~TI~G~ga~~~i~G~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~ 159 (346)
T 1pxz_A 80 LKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVT 159 (346)
T ss_dssp CSSCEECCSSEEEECTTSCEEEETTSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCE
T ss_pred cCccEEecCCeEEEccCCceEEeCCcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCc
Confidence 999999999999999999999996 689999999999999999999998888877 999999998888999999999999
Q ss_pred eEEEeeeeeecCCCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEcCCCCCCCCC
Q 023390 211 HVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPR 283 (283)
Q Consensus 211 nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~~~~~R~PR 283 (283)
|||||||+|+|+.||++|+++++++||||||+|++|+|+||+|++|+...|+.|+||||||+|++++.|||||
T Consensus 160 nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr 232 (346)
T 1pxz_A 160 NAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPR 232 (346)
T ss_dssp EEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTE
T ss_pred eEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCcc
Confidence 9999999999999999999999999999999999999999999999887788899999999995599999997
No 2
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=100.00 E-value=6.3e-56 Score=420.88 Aligned_cols=188 Identities=30% Similarity=0.421 Sum_probs=166.2
Q ss_pred ccc-CcccccCCccCCCCCeEEEEcCCCCCCCCCCCchhHHHhhhcCCCeEEEEeeeeEEEeCceEEecCCcEEEeeCCc
Q 023390 73 LAD-CAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGAS 151 (283)
Q Consensus 73 la~-~a~GfG~~ttGG~gG~v~~VT~~~d~d~~~~~pGtLr~av~~~~P~~IvF~~~g~I~L~~~L~i~snkTI~G~ga~ 151 (283)
.|. .|||||++||||+||++|+||+++| ||+|+++++||||+|++.+.++++++|.|+|||||+|||++
T Consensus 9 ~As~~AeG~g~~ttGG~gG~v~~VTtl~d----------Lr~al~~~~PriIvv~G~I~~~~~~~l~v~snkTI~G~ga~ 78 (340)
T 3zsc_A 9 FASVPTADLPEGTVGGLGGEIVFVRTAEE----------LEKYTTAEGKYVIVVDGTIVFEPKREIKVLSDKTIVGINDA 78 (340)
T ss_dssp GGGCCCSSCTTSCCTTTTSEEEEECSHHH----------HHHHHTSSSCEEEEEEEEEEEEEEEEEEECSSEEEEEEEEE
T ss_pred eecccccccCCCCccCCCceEEEeCCHHH----------HHHHHhCCCCEEEEECcEEEeCCcceEEecCCCEEEeccCc
Confidence 344 6899999999999999999999998 99999999999999976555555599999999999999999
Q ss_pred eEEeCCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceeccc
Q 023390 152 VHIAGGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 231 (283)
Q Consensus 152 ~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~ 231 (283)
+|. |.+|+|++++|||||||+|+++.+.. .+ .+...++|||+|++++|||||||+|+|+.||++|+++
T Consensus 79 -~I~-G~Gi~I~~a~NVIIrnl~i~~~~~~~------~~----~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~ 146 (340)
T 3zsc_A 79 -KIV-GGGLVIKDAQNVIIRNIHFEGFYMED------DP----RGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKK 146 (340)
T ss_dssp -EEE-EEEEEEESCEEEEEESCEEECCCCTT------CT----TSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEET
T ss_pred -EEe-cCceEEEcCceEEEeCeEEECCcccc------Cc----cCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEec
Confidence 898 67999999999999999999865421 00 0123589999999999999999999999999999999
Q ss_pred CCceEEEEcceecccCeEEEeecCCCcC--CCC-ceeEEEEceEEcCCCCCCCCC
Q 023390 232 GSTAITISNNYMTHHNKVMLLGHSDTFT--QDK-NMQVTIAFNHFGEGLVQRMPR 283 (283)
Q Consensus 232 gs~~ITISnn~f~~H~k~~LiG~sd~~~--~D~-~~~VTih~N~F~~~~~~R~PR 283 (283)
++++||||||+|++|+|+||+|++|+.. .|. .|+||||||||. ++.|||||
T Consensus 147 ~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~-~~~~R~Pr 200 (340)
T 3zsc_A 147 YSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFK-NLIQRMPR 200 (340)
T ss_dssp TCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEE-SCCBCTTE
T ss_pred CCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEec-CCCCCCCc
Confidence 9999999999999999999999999763 453 699999999995 99999998
No 3
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=100.00 E-value=3.5e-52 Score=393.32 Aligned_cols=176 Identities=27% Similarity=0.446 Sum_probs=160.8
Q ss_pred cCcccccC---CccCCCCCeEEEEcCCCCCCCCCCCchhHHHhhh-------cCCCeEEEEeeeeEEEeC----ceEEec
Q 023390 75 DCAIGFGK---QAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVI-------QDEPLWIIFARDMVITLK----EELIMN 140 (283)
Q Consensus 75 ~~a~GfG~---~ttGG~gG~v~~VT~~~d~d~~~~~pGtLr~av~-------~~~P~~IvF~~~g~I~L~----~~L~i~ 140 (283)
++|+|||+ +||||+||++|+||+++| ||+|++ +++||+|+ ++|+|+|+ ++|.|+
T Consensus 2 ~~~~Gfa~~nggTtGG~gG~vv~Vttl~d----------L~~Al~~~~~~~~~~~p~iI~--V~G~I~l~~~~~~~i~v~ 69 (326)
T 3vmv_A 2 NGPQGYASMNGGTTGGAGGRVEYASTGAQ----------IQQLIDNRSRSNNPDEPLTIY--VNGTITQGNSPQSLIDVK 69 (326)
T ss_dssp -CCSGGGGSTTCCCTTTTSEEEEESSHHH----------HHHHHHHHHHSSCTTSCEEEE--ECSEEESTTCSSSSEEES
T ss_pred CCCceeeecCCCCccCCCCeEEEECCHHH----------HHHHHhhcccccCCCCCEEEE--EeeEEecCCCCCceEEEe
Confidence 58999999 699999999999999998 999999 89999998 56799999 899998
Q ss_pred ---------CCcEEEeeCCceEEeCCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeC-Cc
Q 023390 141 ---------SFKTIDGRGASVHIAGGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFG-GS 210 (283)
Q Consensus 141 ---------snkTI~G~ga~~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~g-s~ 210 (283)
|||||+|+|+.++|. |.+|+|++++|||||||+|+++.+ .++|+|+|++ ++
T Consensus 70 ~~~~~~~~~sn~TI~G~g~~~~i~-G~gl~i~~a~NVIIrNl~i~~~~~------------------~~~DaI~i~~~s~ 130 (326)
T 3vmv_A 70 NHRGKAHEIKNISIIGVGTNGEFD-GIGIRLSNAHNIIIQNVSIHHVRE------------------GEGTAIEVTDDSK 130 (326)
T ss_dssp CTTCTTSCEEEEEEEECTTCCEEE-SCCEEEESEEEEEEESCEEECCCS------------------TTSCSEEEETTCE
T ss_pred cccccccCCCCeEEEecCCCeEEe-CcEEEEEecceEEEECeEEEcCCC------------------CCCCeEEEecCCC
Confidence 999999999999998 678999999999999999997532 4789999997 99
Q ss_pred eEEEeeeeeecC---------CCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEcCCCCCCC
Q 023390 211 HVWVDHCSLSNC---------NDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRM 281 (283)
Q Consensus 211 nVWIDHcs~s~~---------~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~~~~~R~ 281 (283)
|||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|+...+ .++||||||||. ++.|||
T Consensus 131 nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~~-~~~vT~~~N~f~-~~~~R~ 208 (326)
T 3vmv_A 131 NVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASLA-PDKITYHHNYFN-NLNSRV 208 (326)
T ss_dssp EEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGGGC-CEEEEEESCEEE-EEEECT
T ss_pred cEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCccc-CccEEEEeeEec-CCcCcC
Confidence 999999999975 499999999999999999999999999999999876432 369999999995 999999
Q ss_pred CC
Q 023390 282 PR 283 (283)
Q Consensus 282 PR 283 (283)
||
T Consensus 209 Pr 210 (326)
T 3vmv_A 209 PL 210 (326)
T ss_dssp TE
T ss_pred Cc
Confidence 97
No 4
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=100.00 E-value=2.9e-52 Score=394.21 Aligned_cols=175 Identities=29% Similarity=0.387 Sum_probs=159.1
Q ss_pred CcccccCCccCCCCCeEEEEcCCCCCCCCCCCchhHHHhhhc---CCCeEEEEeeeeEEEeCc---------------eE
Q 023390 76 CAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQ---DEPLWIIFARDMVITLKE---------------EL 137 (283)
Q Consensus 76 ~a~GfG~~ttGG~gG~v~~VT~~~d~d~~~~~pGtLr~av~~---~~P~~IvF~~~g~I~L~~---------------~L 137 (283)
+|+|||++||||++|++|+||++++ ||+||.+ ++||||+|+ |+|+++. +|
T Consensus 1 ga~Gfa~~ttGG~gg~~~~Vtt~~~----------L~~al~~~~~~~p~iI~~~--G~i~~~~~~~~c~~~~~~~~~~~l 68 (330)
T 2qy1_A 1 GPVGYGAGTTGGGNKVPVNVATFEA----------MQSAIDSYSGSGGLVLNYT--GKFDFGTIKDVCAQWKLPAKTVQI 68 (330)
T ss_dssp CCCSTTTTCCTTTTSCCEEECSHHH----------HHHHHHHSCSSSCEEEEEC--CBCCGGGCCCGGGSTTSCCCEEEE
T ss_pred CCceeecCCCCCCCceEEEcCCHHH----------HHHHHhccCCCCCEEEEEc--cEEecccccccccccccccceeEE
Confidence 5899999999999999999999987 9999984 899999994 6888874 78
Q ss_pred EecCCcEEEeeCCceEEeCCCeEEEE-eeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeC-----Cce
Q 023390 138 IMNSFKTIDGRGASVHIAGGPCITVQ-YVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFG-----GSH 211 (283)
Q Consensus 138 ~i~snkTI~G~ga~~~I~~G~~i~i~-~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~g-----s~n 211 (283)
.+.|||||+|+++ +|. |.+|+|+ +++|||||||+|+++.+ + .++|+|+|++ ++|
T Consensus 69 ~v~sn~TI~G~~a--~i~-g~gl~i~~~~~NVIIrnl~i~~~~~-------------~----~~~DaI~i~g~~~~~s~n 128 (330)
T 2qy1_A 69 KNKSDVTIKGANG--SAA-NFGIRVVGNAHNVIIQNMTIGLLQG-------------G----EDADSISLEGNSSGEPSK 128 (330)
T ss_dssp ESCCSEEEEECTT--CBB-SSEEEEESSCEEEEEESCEEESCSS-------------G----GGCCSEEEECBTTBCCEE
T ss_pred EcCCCeEEECCCc--EEe-eeeEEEeCCCCeEEEeCeEEeCCCC-------------C----CCCcceeeccccCccccc
Confidence 8899999998876 466 6799999 89999999999997643 1 4789999994 999
Q ss_pred EEEeeeeeecCC-----------CCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEcCCCCCC
Q 023390 212 VWVDHCSLSNCN-----------DGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQR 280 (283)
Q Consensus 212 VWIDHcs~s~~~-----------DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~~~~~R 280 (283)
||||||+|+|.. ||++|+++++++||||||+|++|+|+||+|++|++..|+.++|||||||| +++.||
T Consensus 129 VWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f-~~~~~R 207 (330)
T 2qy1_A 129 IWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRF-ENVESR 207 (330)
T ss_dssp EEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEE-EEEEEC
T ss_pred EEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEE-cCCCCC
Confidence 999999999876 99999999999999999999999999999999988777779999999999 499999
Q ss_pred CCC
Q 023390 281 MPR 283 (283)
Q Consensus 281 ~PR 283 (283)
|||
T Consensus 208 ~Pr 210 (330)
T 2qy1_A 208 VPL 210 (330)
T ss_dssp TTE
T ss_pred CCc
Confidence 997
No 5
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=100.00 E-value=1.3e-50 Score=386.43 Aligned_cols=192 Identities=27% Similarity=0.430 Sum_probs=165.2
Q ss_pred ccccCcccccC---CccCCCCCe-EEEEcCCCCCCCCCCCchhHHHhh--hcCCCeEEEEeeeeEEEeCc----------
Q 023390 72 QLADCAIGFGK---QAIGGKDGK-IYVVTDSGDDDPVNPKPGTLRYAV--IQDEPLWIIFARDMVITLKE---------- 135 (283)
Q Consensus 72 ~la~~a~GfG~---~ttGG~gG~-v~~VT~~~d~d~~~~~pGtLr~av--~~~~P~~IvF~~~g~I~L~~---------- 135 (283)
.++.+++|||+ +||||++|+ +|+||+++| ||+|+ .+++||+|++ +|+|+++.
T Consensus 3 ~~~~~~~G~a~~~~gtTGG~~g~~v~~Vtt~~~----------L~~al~~~~~~p~VI~V--~GtI~~~~~~~~~s~~~~ 70 (355)
T 1pcl_A 3 ETDAATTGWATQNGGTTGGAKAAKAVEVKNISD----------FKKALNGTDSSAKIIKV--TGPIDISGGKAYTSFDDQ 70 (355)
T ss_pred ccccCCcceeecCCCCccCCCCceEEEeCCHHH----------HHHHHhhCCCCcEEEEE--CCEEecCCcccccccccc
Confidence 34568999998 899999998 699999998 99999 7899997765 56999874
Q ss_pred ----eEEecCCcEEEeeCCceEEeCCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCce
Q 023390 136 ----ELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSH 211 (283)
Q Consensus 136 ----~L~i~snkTI~G~ga~~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~n 211 (283)
+|.|+|||||+|+|+.++|. |.+|+|++++|||||||+|++.....+.+ + | ..|| ..++|+|+|++++|
T Consensus 71 ~~~~~l~v~sn~TI~G~G~~~~i~-g~gl~i~~~~NVIIrnl~i~~~~~~~p~~--~-~-~~g~--~~~~DaI~i~~s~n 143 (355)
T 1pcl_A 71 KARSQISIPSNTTIIGVGSNGKFT-NGSLVIKGVKNVILRNLYIETPVDVAPHY--E-S-GDGW--NAEWDAAVIDNSTN 143 (355)
T ss_pred ccceeEEeCCCeEEEEecCCeEEe-cCEEEEecCCeEEEeeeEEEcCccccccc--c-c-ccCc--cccCceEEecCCCc
Confidence 78899999999999999999 67999999999999999999743111100 0 0 1133 25799999999999
Q ss_pred EEEeeeeeecC-----------------CCCceecccCCceEEEEcceecccCeEEEeecCCCcC-CCC-ceeEEEEceE
Q 023390 212 VWVDHCSLSNC-----------------NDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFT-QDK-NMQVTIAFNH 272 (283)
Q Consensus 212 VWIDHcs~s~~-----------------~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~-~D~-~~~VTih~N~ 272 (283)
||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++. +|+ .|+|||||||
T Consensus 144 VWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~ 223 (355)
T 1pcl_A 144 VWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNV 223 (355)
T ss_pred EEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcE
Confidence 99999999997 6999999999999999999999999999999999875 674 7999999999
Q ss_pred EcCCCCCCCCC
Q 023390 273 FGEGLVQRMPR 283 (283)
Q Consensus 273 F~~~~~~R~PR 283 (283)
| +++.|||||
T Consensus 224 f-~~~~~R~Pr 233 (355)
T 1pcl_A 224 F-DRVTERAPR 233 (355)
T ss_pred E-eCCcccCCc
Confidence 9 599999998
No 6
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=100.00 E-value=2.6e-51 Score=392.00 Aligned_cols=188 Identities=29% Similarity=0.500 Sum_probs=163.3
Q ss_pred CcccccC---CccCCCCC---eEEEEcCCCCCCCCCCCchhHHHhh-hcCCCeEEEEeeeeEEEeCc-------------
Q 023390 76 CAIGFGK---QAIGGKDG---KIYVVTDSGDDDPVNPKPGTLRYAV-IQDEPLWIIFARDMVITLKE------------- 135 (283)
Q Consensus 76 ~a~GfG~---~ttGG~gG---~v~~VT~~~d~d~~~~~pGtLr~av-~~~~P~~IvF~~~g~I~L~~------------- 135 (283)
+++|||+ +||||++| +||+||+++| ||+|+ .+++||+|++ +|+|+++.
T Consensus 13 ~~~Gfa~~~~gtTGG~~g~~~~v~~Vtt~~d----------L~~al~~~~~p~vI~V--~GtI~~~~~~~~~s~~~~~~~ 80 (361)
T 1pe9_A 13 PTVGWASQNGFTTGGAAATSDNIYIVTNISE----------FTSALSAGAEAKIIQI--KGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CSSSGGGSSSCCCTTTTCCGGGEEEECSHHH----------HHHHHTTTTSCEEEEE--CSEEETTTTCCCCSHHHHHHH
T ss_pred CCCceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhcCCCcEEEEE--CCEEecCCccccccccccccc
Confidence 4899995 99999998 7899999998 99999 8999999976 56999974
Q ss_pred -eEEecCCcEEEeeCCceEEeCCCeEEE---EeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeC-Cc
Q 023390 136 -ELIMNSFKTIDGRGASVHIAGGPCITV---QYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFG-GS 210 (283)
Q Consensus 136 -~L~i~snkTI~G~ga~~~I~~G~~i~i---~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~g-s~ 210 (283)
+|.|+|||||+|+|+.++|. |.+|+| ++++|||||||+|++.....+.+ + | ..||+ .++|+|+|++ ++
T Consensus 81 ~~l~v~snkTI~G~G~~~~i~-g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~--~-~-~~g~~--~~~DaI~i~~~s~ 153 (361)
T 1pe9_A 81 SQINIPANTTVIGLGTDAKFI-NGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHY--E-K-GDGWN--AEWDAMNITNGAH 153 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEE-SSEEEEEGGGTCEEEEEESCEEECCCCSSCEE--E-T-TTEEE--CCCCSEEEETTCE
T ss_pred eeEEecCCcEEEccCCCeEEe-cCEEEEecCCCCceEEEeCeEEEcCccccccc--c-c-ccCcc--cCCceEEeecCCc
Confidence 78999999999999999999 679999 79999999999999743111111 0 0 11232 5899999999 99
Q ss_pred eEEEeeeeeecC-----------------CCCceecccCCceEEEEcceecccCeEEEeecCCCcC-CC-CceeEEEEce
Q 023390 211 HVWVDHCSLSNC-----------------NDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFT-QD-KNMQVTIAFN 271 (283)
Q Consensus 211 nVWIDHcs~s~~-----------------~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~-~D-~~~~VTih~N 271 (283)
|||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++. +| +.|+||||||
T Consensus 154 nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN 233 (361)
T 1pe9_A 154 HVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNN 233 (361)
T ss_dssp EEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESC
T ss_pred eEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECe
Confidence 999999999997 6999999999999999999999999999999999865 55 4799999999
Q ss_pred EEcCCCCCCCCC
Q 023390 272 HFGEGLVQRMPR 283 (283)
Q Consensus 272 ~F~~~~~~R~PR 283 (283)
|| +++.|||||
T Consensus 234 ~f-~~~~~R~Pr 244 (361)
T 1pe9_A 234 VF-NRVTERAPR 244 (361)
T ss_dssp EE-EEEEECSSE
T ss_pred EE-cCccccCcc
Confidence 99 599999998
No 7
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=100.00 E-value=1.8e-49 Score=385.36 Aligned_cols=189 Identities=31% Similarity=0.461 Sum_probs=162.9
Q ss_pred cCcccccC---CccCCCCCe---EEEEcCCCCCCCCCCCchhHHHhhhcC--------CCeEEEEeeeeEEEeCc-----
Q 023390 75 DCAIGFGK---QAIGGKDGK---IYVVTDSGDDDPVNPKPGTLRYAVIQD--------EPLWIIFARDMVITLKE----- 135 (283)
Q Consensus 75 ~~a~GfG~---~ttGG~gG~---v~~VT~~~d~d~~~~~pGtLr~av~~~--------~P~~IvF~~~g~I~L~~----- 135 (283)
..++|||+ +||||++|+ +|+||+++| |++||.+. +||+|++ +|+|++..
T Consensus 9 ~~~~GfA~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~~~~~~priI~V--~GtId~~~~~~g~ 76 (416)
T 1vbl_A 9 KPYDGWAAYGEGTTGGAMASPQNVFVVTNRTE----------LIQALGGNNHTNQYNSVPKIIYV--KGTIDLNVDDNNQ 76 (416)
T ss_dssp CTTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHTTSCTTGGGGCCSCEEEEE--CSEEESSBCTTSC
T ss_pred CCCcceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhccccccccCCCCEEEEE--CCEEecccCCCCc
Confidence 47999999 999999995 899999998 99999864 9999996 56898752
Q ss_pred --------------------------------------------------eEEecCCcEEEeeCCceEEeCCCeEEEEee
Q 023390 136 --------------------------------------------------ELIMNSFKTIDGRGASVHIAGGPCITVQYV 165 (283)
Q Consensus 136 --------------------------------------------------~L~i~snkTI~G~ga~~~I~~G~~i~i~~a 165 (283)
+|.|+|||||+|+|+.++|. |.+|+|+++
T Consensus 77 ~~~c~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~-g~gl~i~~~ 155 (416)
T 1vbl_A 77 PVGPDFYKDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIK-GGGFLIKNV 155 (416)
T ss_dssp BCCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEE-SCEEEEESC
T ss_pred cccccccccCCcchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEe-cCEEEeecC
Confidence 67889999999999999999 679999999
Q ss_pred ccEEEEeeEEEeccc----CCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecC-----------------CC
Q 023390 166 TNIIIHGINIHDCKR----GGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNC-----------------ND 224 (283)
Q Consensus 166 ~NVIIrnL~i~~~~~----~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~-----------------~D 224 (283)
+|||||||+|++... |.++. +..+.+ ..++|+|+|++++|||||||+|+|+ .|
T Consensus 156 ~NVIIrNl~i~~~~~~~p~~~p~~-----~~~~~~-~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~D 229 (416)
T 1vbl_A 156 DNVIIRNIEFEAPLDYFPEWDPTD-----GTLGEW-NSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHD 229 (416)
T ss_dssp EEEEEESCEEECCCCSSCEEETTS-----TTTCEE-ECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCC
T ss_pred ceEEEeCeEEEcCccccccccccc-----cccccc-cCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeecc
Confidence 999999999997532 11110 000111 2578999999999999999999997 59
Q ss_pred CceecccCCceEEEEcceecccCeEEEeecCCCcCCCC-ceeEEEEceEEcCCCCCCCCC
Q 023390 225 GLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDK-NMQVTIAFNHFGEGLVQRMPR 283 (283)
Q Consensus 225 gliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~-~~~VTih~N~F~~~~~~R~PR 283 (283)
|++|+++++++||||||+|++|+|+||+|++|++..|+ .|+|||||||| +++.|||||
T Consensus 230 Gl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f-~~~~~R~Pr 288 (416)
T 1vbl_A 230 GALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYY-KNVTQRLPR 288 (416)
T ss_dssp CSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEE-EEEEECSSE
T ss_pred cceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEe-cCCccCCcc
Confidence 99999999999999999999999999999999887775 79999999999 599999998
No 8
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=100.00 E-value=2.4e-49 Score=382.76 Aligned_cols=188 Identities=29% Similarity=0.535 Sum_probs=162.6
Q ss_pred cCcccccC---CccCCCCCe---EEEEcCCCCCCCCCCCchhHHHhh---hcCCCeEEEEeeeeEEEeCc----------
Q 023390 75 DCAIGFGK---QAIGGKDGK---IYVVTDSGDDDPVNPKPGTLRYAV---IQDEPLWIIFARDMVITLKE---------- 135 (283)
Q Consensus 75 ~~a~GfG~---~ttGG~gG~---v~~VT~~~d~d~~~~~pGtLr~av---~~~~P~~IvF~~~g~I~L~~---------- 135 (283)
..|+|||+ +||||++|+ +|+||+++| |++|+ .+++||+|++ +|+|++..
T Consensus 9 ~~a~Gfa~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~priI~v--~GtId~~~~~~g~~~~c~ 76 (399)
T 2o04_A 9 GSNDGWGAYSTGTTGGSKASSSNVYTVSNRNQ----------LVSALGKETNTTPKIIYI--KGTIDMNVDDNLKPLGLN 76 (399)
T ss_dssp CTTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHHCCTTCCSCEEEEE--CSEEESSBCTTCCBCCHH
T ss_pred CCCcceeecCCCCcCCCCCccceEEEeCCHHH----------HHHHHHhccCCCCEEEEE--cCEEecccCCcccccccc
Confidence 37999999 999999996 899999998 99999 8899999996 45898741
Q ss_pred ---------------------------------------------eEEecCCcEEEeeCCceEEeCCCeEEEEeeccEEE
Q 023390 136 ---------------------------------------------ELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIII 170 (283)
Q Consensus 136 ---------------------------------------------~L~i~snkTI~G~ga~~~I~~G~~i~i~~a~NVII 170 (283)
+|.|+|||||+|+|+.++|. |.+|+|+. +||||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~-g~gl~i~~-~NVII 154 (399)
T 2o04_A 77 DYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVV-GGNFQIKS-DNVII 154 (399)
T ss_dssp HHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEE-SCEEEECS-EEEEE
T ss_pred ccccCCcchhhhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEe-eCEEEeeC-CCEEE
Confidence 57889999999999999999 67999988 99999
Q ss_pred EeeEEEecc---c-CCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecC-----------------CCCceec
Q 023390 171 HGINIHDCK---R-GGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNC-----------------NDGLIDA 229 (283)
Q Consensus 171 rnL~i~~~~---~-~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~-----------------~DgliDv 229 (283)
|||+|++.. | |.++. +.-+. -..++|+|+|++++|||||||+|+|+ .||++|+
T Consensus 155 rnl~i~~~~~~~p~~~p~~-----~~~~~-~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di 228 (399)
T 2o04_A 155 RNIEFQDAYDYFPQWDPTD-----GSSGN-WNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDA 228 (399)
T ss_dssp ESCEEECCCCSSCEEETTS-----STTCE-EECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEE
T ss_pred eCeEEecCccccccccccc-----ccccc-ccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceee
Confidence 999999743 2 11110 00011 12578999999999999999999996 5999999
Q ss_pred ccCCceEEEEcceecccCeEEEeecCCCcCCCC-ceeEEEEceEEcCCCCCCCCC
Q 023390 230 IHGSTAITISNNYMTHHNKVMLLGHSDTFTQDK-NMQVTIAFNHFGEGLVQRMPR 283 (283)
Q Consensus 230 ~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~-~~~VTih~N~F~~~~~~R~PR 283 (283)
++++++||||||+|++|+|+||+|++|++.+|+ .|+|||||||| +++.|||||
T Consensus 229 ~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f-~~~~~R~Pr 282 (399)
T 2o04_A 229 SNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRY-KNIVQAAPR 282 (399)
T ss_dssp ETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEE-EEEEECTTE
T ss_pred eccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEe-cCCcccCCC
Confidence 999999999999999999999999999887775 79999999999 499999998
No 9
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=100.00 E-value=3.7e-49 Score=376.92 Aligned_cols=175 Identities=24% Similarity=0.335 Sum_probs=158.5
Q ss_pred ccccCcccccCCccCCCCCeEEEEcCCCCCCCCCCCchhHHHhhhcCCCeEEEEeeeeEEEeC-----------------
Q 023390 72 QLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLK----------------- 134 (283)
Q Consensus 72 ~la~~a~GfG~~ttGG~gG~v~~VT~~~d~d~~~~~pGtLr~av~~~~P~~IvF~~~g~I~L~----------------- 134 (283)
.++++|+|||++||||++|++|+||+++| ||+|+++++||||+|+ |+|+++
T Consensus 2 ~~~~~a~Gfa~~tTGG~~g~~~~Vtt~~d----------L~~al~~~~prvIvv~--gti~~~~~~G~~t~~~c~~~~~~ 69 (359)
T 1idk_A 2 GVSGSAEGFAKGVTGGGSATPVYPDTIDE----------LVSYLGDDEARVIVLT--KTFDFTDSEGTTTGTGCAPWGTA 69 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEEC--SEEECTTTTCEEEEEEECTTCSS
T ss_pred CCCCCCccccCCCCCCCCceEEecCCHHH----------HHHHHcCCCceEEEEC--CEEEeccccCccccccccccccc
Confidence 57889999999999999999999999988 9999999999999995 577763
Q ss_pred --------------------------------ceEEecCCcEEEeeCCceEEeCCCeEEEE-eeccEEEEeeEEEecccC
Q 023390 135 --------------------------------EELIMNSFKTIDGRGASVHIAGGPCITVQ-YVTNIIIHGINIHDCKRG 181 (283)
Q Consensus 135 --------------------------------~~L~i~snkTI~G~ga~~~I~~G~~i~i~-~a~NVIIrnL~i~~~~~~ 181 (283)
.+|.|.|||||+|+|++++|. |.+|+|+ +++|||||||+|+++.|.
T Consensus 70 ~~~~~~~~~~~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~-G~gl~i~~~a~NVIIrnL~i~~~~~~ 148 (359)
T 1idk_A 70 SACQVAIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIK-GKGLRIVSGAENIIIQNIAVTDINPK 148 (359)
T ss_dssp TTBCEEECGGGHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEE-SCCEEECTTCEEEEEESCEEEEECTT
T ss_pred cccccccccccccccccccCccccccccccccceEEeCCCceEEEecCCeEEe-cceEEEecCCCcEEEeCeEEEccccc
Confidence 468999999999999999999 6789998 899999999999987541
Q ss_pred CCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceec-ccCCceEEEEcceec------------ccCe
Q 023390 182 GNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA-IHGSTAITISNNYMT------------HHNK 248 (283)
Q Consensus 182 g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv-~~gs~~ITISnn~f~------------~H~k 248 (283)
+. .++|+|+|++++|||||||+|+|+.|++++. ++++++||||||+|. +|||
T Consensus 149 -----------~~----~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~ 213 (359)
T 1idk_A 149 -----------YV----WGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWA 213 (359)
T ss_dssp -----------EE----TSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCC
T ss_pred -----------cc----ccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccce
Confidence 22 4789999999999999999999999999986 788999999999997 4469
Q ss_pred EEEeecCCCcCCCCceeEEEEceEEcCCCCCCCCC
Q 023390 249 VMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPR 283 (283)
Q Consensus 249 ~~LiG~sd~~~~D~~~~VTih~N~F~~~~~~R~PR 283 (283)
+||+|++| +||||||||. ++.+||||
T Consensus 214 ~~L~G~sd--------~vT~hhN~f~-~~~~R~Pr 239 (359)
T 1idk_A 214 IYLDGDAD--------LVTMKGNYIY-HTSGRSPK 239 (359)
T ss_dssp EEECCSSC--------EEEEESCEEE-SBCSCTTE
T ss_pred EEEEecCC--------CeEEEceEee-cCcccCcc
Confidence 99999986 8999999996 99999997
No 10
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=100.00 E-value=5.6e-47 Score=361.86 Aligned_cols=174 Identities=29% Similarity=0.403 Sum_probs=154.6
Q ss_pred cccCcccccCCccCCCCCeEEEEcCCCCCCCCCCCchhHHHhhhcCCCeEEEEeeeeEEEeC------------------
Q 023390 73 LADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLK------------------ 134 (283)
Q Consensus 73 la~~a~GfG~~ttGG~gG~v~~VT~~~d~d~~~~~pGtLr~av~~~~P~~IvF~~~g~I~L~------------------ 134 (283)
++..|+|||++||||++|++|+||+++| ||+|+++++||+|+|+ |+|++.
T Consensus 3 ~~~~a~Gfa~~tTGG~gg~~v~Vtt~~~----------L~~al~~~~prvIvv~--gtid~~g~~g~~~~~~c~~~~~~~ 70 (359)
T 1qcx_A 3 VVGAAEGFAHGVTGGGSASPVYPTTTDE----------LVSYLGDNEPRVIILD--QTFDFTGTEGTETTTGCAPWGTAS 70 (359)
T ss_dssp CCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEEC--SEEECTTTTCEEEEEEECTTCSST
T ss_pred cCCCcceeecCCcCCCCcceEEeCCHHH----------HHHHHcCCCCeEEEEC--cEEeeccccccccccccccccccc
Confidence 5678999999999999999999999998 9999999999999963 355531
Q ss_pred -------------------------------ceEEecCCcEEEeeCCceEEeCCCeEEEE-eeccEEEEeeEEEecccCC
Q 023390 135 -------------------------------EELIMNSFKTIDGRGASVHIAGGPCITVQ-YVTNIIIHGINIHDCKRGG 182 (283)
Q Consensus 135 -------------------------------~~L~i~snkTI~G~ga~~~I~~G~~i~i~-~a~NVIIrnL~i~~~~~~g 182 (283)
.+|.|.|||||+|+|++++|. |.+|+|+ +++|||||||+|+++.+
T Consensus 71 ~~~~~i~~~~~~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~-G~gl~i~~~a~NVIIrnl~i~~~~~-- 147 (359)
T 1qcx_A 71 QCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIK-GKGLRVVSGAKNVIIQNIAVTDINP-- 147 (359)
T ss_dssp TBCEEECGGGHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEE-SCCEEEETTCCCEEEESCEEEEECT--
T ss_pred cccceecccccccccccCCccceeeecccccceEEeCCCceEEecCCceEEe-cceEEEecCCCCEEEeCcEEEecCC--
Confidence 368889999999999999999 6789998 99999999999998654
Q ss_pred CceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCce-ecccCCceEEEEcceec-----------cc-CeE
Q 023390 183 NANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLI-DAIHGSTAITISNNYMT-----------HH-NKV 249 (283)
Q Consensus 183 ~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~Dgli-Dv~~gs~~ITISnn~f~-----------~H-~k~ 249 (283)
++. .++|||+|++++|||||||+|+|+.||++ +.++++++||||||+|+ +| +++
T Consensus 148 ---------~~~----~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~ 214 (359)
T 1qcx_A 148 ---------KYV----WGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGV 214 (359)
T ss_dssp ---------TEE----TSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCE
T ss_pred ---------ccc----ccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCccccccee
Confidence 122 46899999999999999999999999998 56779999999999997 34 799
Q ss_pred EEeecCCCcCCCCceeEEEEceEEcCCCCCCCCC
Q 023390 250 MLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPR 283 (283)
Q Consensus 250 ~LiG~sd~~~~D~~~~VTih~N~F~~~~~~R~PR 283 (283)
||+|++| ++|||||||. ++.+||||
T Consensus 215 ~l~G~sd--------~vT~~~N~f~-~~~~R~Pr 239 (359)
T 1qcx_A 215 YLDGSND--------MVTLKGNYFY-NLSGRMPK 239 (359)
T ss_dssp EECCSSE--------EEEEESCEEE-SBCSCTTE
T ss_pred EEecCCC--------CeehcccEec-cCcccCce
Confidence 9999886 8999999996 99999997
No 11
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=100.00 E-value=1.2e-42 Score=331.36 Aligned_cols=171 Identities=23% Similarity=0.260 Sum_probs=142.9
Q ss_pred CcccccC---CccCCCCCeEEEEcCCCCCCCCCCCchhHHHhhhc-------------CCCeEEEEeeeeEEEe------
Q 023390 76 CAIGFGK---QAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQ-------------DEPLWIIFARDMVITL------ 133 (283)
Q Consensus 76 ~a~GfG~---~ttGG~gG~v~~VT~~~d~d~~~~~pGtLr~av~~-------------~~P~~IvF~~~g~I~L------ 133 (283)
...|||. +|+|| +.+|+||++++ |++|+.+ ++|++| .++|+|+|
T Consensus 3 ~~~G~at~~Ggt~gg--~~~~tvtt~~~----------L~~al~~~~~~~~g~~~~~~~~p~vi--~v~GtId~~~~~~~ 68 (353)
T 1air_A 3 DTGGYAATAGGNVTG--AVSKTATSMQD----------IVNIIDAARLDANGKKVKGGAYPLVI--TYTGNEDSLINAAA 68 (353)
T ss_dssp BCSSSCBCCTTCSTT--CEEEEESSHHH----------HHHHHHHTTBCTTSCBCTBCSSCEEE--EECCCCHHHHHHHH
T ss_pred CCCcceecCCCCCCC--cceEEeCCHHH----------HHHHHHhhccccccccccCCCceEEE--EEccEEeccccccc
Confidence 4689986 34444 46789999987 9999954 455555 45678988
Q ss_pred ----------CceEEe---cCCcEEEeeCCceEEeCCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCC
Q 023390 134 ----------KEELIM---NSFKTIDGRGASVHIAGGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISD 200 (283)
Q Consensus 134 ----------~~~L~i---~snkTI~G~ga~~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~ 200 (283)
+++|.| +|||||+|++++ +. |+||+|++++|||||||+|+... +...+
T Consensus 69 ~~~~~~~~~~~~~~~i~~~~sn~TI~G~~~~--~~-g~gl~i~~~~NVIIrnl~i~~~~----------------~~~~~ 129 (353)
T 1air_A 69 ANICGQWSKDPRGVEIKEFTKGITIIGANGS--SA-NFGIWIKKSSDVVVQNMRIGYLP----------------GGAKD 129 (353)
T ss_dssp TSGGGSTTSCCCEEEEESBCSCEEEEECTTC--CB-SSEEEEESCCSEEEESCEEESCS----------------CGGGT
T ss_pred cccccccccCCCceEEEecCCCEEEEeccCC--CC-CceEEEeccCcEEEeccEEEeCC----------------CCCCC
Confidence 356777 599999999876 34 78999999999999999999521 12358
Q ss_pred CCeEEeeCCceEEEeeeeeecC-------------CCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEE
Q 023390 201 GDGVSIFGGSHVWVDHCSLSNC-------------NDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVT 267 (283)
Q Consensus 201 ~DaI~I~gs~nVWIDHcs~s~~-------------~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VT 267 (283)
+|+|+|++++|||||||+|+|. .||++|+++++++||||||+|.+|+|+||+|++|++. .++||
T Consensus 130 ~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~---g~~vT 206 (353)
T 1air_A 130 GDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDT---GRNIT 206 (353)
T ss_dssp CCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCC---CCEEE
T ss_pred CCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCC---CceEE
Confidence 9999999999999999999985 3999999999999999999999999999999998754 27999
Q ss_pred EEceEEcCCCCCCCCC
Q 023390 268 IAFNHFGEGLVQRMPR 283 (283)
Q Consensus 268 ih~N~F~~~~~~R~PR 283 (283)
||||||. ++.|||||
T Consensus 207 ~hhN~f~-~~~~R~Pr 221 (353)
T 1air_A 207 YHHNYYN-DVNARLPL 221 (353)
T ss_dssp EESCEEE-EEEECSCE
T ss_pred EEceEEc-CCcCCCCC
Confidence 9999995 99999997
No 12
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=98.43 E-value=1.2e-06 Score=90.27 Aligned_cols=120 Identities=19% Similarity=0.309 Sum_probs=80.9
Q ss_pred eEEecCCcEEEeeCCce----EEe---CCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeC
Q 023390 136 ELIMNSFKTIDGRGASV----HIA---GGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFG 208 (283)
Q Consensus 136 ~L~i~snkTI~G~ga~~----~I~---~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~g 208 (283)
.|.|... ||+|+|..- ... ....|.+..++||.|++|++++.... .-.|.. |. ..|+|.+++
T Consensus 107 NItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~-gI~I~n-p~--------~NDGid~DG 175 (772)
T 3gqn_A 107 NIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLH-GIDITC-GG--------LDYPYLGDG 175 (772)
T ss_dssp EEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSC-SEEEEC-SS--------SSCCCCCTT
T ss_pred eEEEEee-EEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCC-CEEEeC-CC--------cCCcCCCcC
Confidence 4555333 899865420 000 01258899999999999999985321 111221 11 126777776
Q ss_pred ------CceEEEeeeeeecCCCCceecccCCceEEEEcceeccc-----CeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 209 ------GSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHH-----NKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 209 ------s~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~f~~H-----~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
|+||||++|.++...|..|.+ +.+.+|+|+||++.++ ..++-+|.. ..+|++.+|.|.
T Consensus 176 i~fdi~S~NV~I~Nc~I~ntGDDcIAI-ksSeNI~I~Nc~c~gphG~S~~~GIsIGsg-------s~NVtV~Nc~~~ 244 (772)
T 3gqn_A 176 TTAPNPSENIWIENCEATGFGDDGITT-HHSQYINILNCYSHDPRLTANCNGFEIDDG-------SRHVVLSNNRSK 244 (772)
T ss_dssp CCCSSCCEEEEEESCEEESCSSCSEEE-CSCEEEEEESCEEECCSSSSSCCSEEECTT-------CEEEEEEEEEEE
T ss_pred cccccccceEEEEeeEEEecCcCeEEe-cCCceEEEEeEEEECCCCCCCcccEEecCC-------cccEEEEceEEE
Confidence 999999999998866666676 5699999999999544 245566632 258999999995
No 13
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=98.41 E-value=2.5e-06 Score=81.00 Aligned_cols=95 Identities=13% Similarity=0.153 Sum_probs=75.2
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceeccc-----
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH----- 231 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~----- 231 (283)
..++.+.+++||.|+|++|+. |. .....|||.+.+|+||+|.+|.|+...|. +.++.
T Consensus 174 ~~~i~~~~~~~v~i~~v~I~~--~~---------------~~~NtDGid~~~s~nV~I~n~~i~~gDDc-Iaiks~~~~~ 235 (376)
T 1bhe_A 174 NFHVVFSDGDGFTAWKTTIKT--PS---------------TARNTDGIDPMSSKNITIAYSNIATGDDN-VAIKAYKGRA 235 (376)
T ss_dssp SCSEEEESCEEEEEEEEEEEC--CT---------------TCSSCCSEEEESCEEEEEESCEEECSSCS-EEEEECTTSC
T ss_pred cEEEEEeCCCcEEEEeEEEEC--CC---------------CCCCCceEeecCCceEEEEeCEEecCCCe-EEEcccCCCC
Confidence 356888889999999999985 21 01368999999999999999999977665 46663
Q ss_pred CCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 232 GSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 232 gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
.+.+|+|+||.|.. ..++-+|+..+ ...+|++.+|.|.
T Consensus 236 ~s~nI~I~n~~~~~-ghGisiGSe~~----~v~nV~v~n~~~~ 273 (376)
T 1bhe_A 236 ETRNISILHNDFGT-GHGMSIGSETM----GVYNVTVDDLKMN 273 (376)
T ss_dssp CEEEEEEEEEEECS-SSCEEEEEEES----SEEEEEEEEEEEE
T ss_pred CceEEEEEeeEEEc-cccEEeccCCc----cEeeEEEEeeEEe
Confidence 79999999999985 33577887432 3668999999995
No 14
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=98.37 E-value=5.1e-06 Score=77.98 Aligned_cols=102 Identities=14% Similarity=0.187 Sum_probs=76.9
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceE
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 236 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~I 236 (283)
..+|.+..++||.|+|++|.... +.. . .....|||.+..++||+|.+|.++...|. +.++. +.+|
T Consensus 123 ~~~i~i~~~~nv~i~~~~I~~~~--~d~-------~----~~~ntDGid~~~s~nV~I~n~~i~~gDDc-iaiks-g~nI 187 (339)
T 2iq7_A 123 VQAFSINSATTLGVYDVIIDNSA--GDS-------A----GGHNTDAFDVGSSTGVYISGANVKNQDDC-LAINS-GTNI 187 (339)
T ss_dssp SCCEEEESCEEEEEESCEEECGG--GGG-------T----TCCSCCSEEEESCEEEEEESCEEECSSCS-EEESS-EEEE
T ss_pred cceEEEeccCCEEEEEEEEECCc--ccc-------c----cCCCCCcEEEcCcceEEEEecEEecCCCE-EEEcC-CccE
Confidence 35688889999999999998521 100 0 01368999999999999999999988776 46554 5999
Q ss_pred EEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 237 TISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 237 TISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+|+||.+.... ++-+|+...+.......|++.++.|.
T Consensus 188 ~i~n~~~~~gh-GisiGSlg~~~~~~v~nV~v~n~~~~ 224 (339)
T 2iq7_A 188 TFTGGTCSGGH-GLSIGSVGGRSDNTVKTVTISNSKIV 224 (339)
T ss_dssp EEESCEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEE
T ss_pred EEEeEEEECCc-eEEECcCCcccCCCEEEEEEEeeEEE
Confidence 99999999643 57788743333344678999999984
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=98.34 E-value=2.8e-06 Score=85.93 Aligned_cols=119 Identities=20% Similarity=0.332 Sum_probs=80.3
Q ss_pred eEEecCCcEEEeeCCc----eEEeC---CCeEEEEeeccEEEEeeEEEecccCCCce-eecCCCccccCcCCCCCeEEee
Q 023390 136 ELIMNSFKTIDGRGAS----VHIAG---GPCITVQYVTNIIIHGINIHDCKRGGNAN-VRDSPSHYGWRTISDGDGVSIF 207 (283)
Q Consensus 136 ~L~i~snkTI~G~ga~----~~I~~---G~~i~i~~a~NVIIrnL~i~~~~~~g~~~-ir~~~~~~g~r~~~~~DaI~I~ 207 (283)
.|.|... ||+|+|.. ....+ ...|.+..++||.|++|++++... .++ |.. +. ..|++.++
T Consensus 107 NItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~--~gI~I~~-~~--------~NDGid~D 174 (609)
T 3gq8_A 107 NIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTL--HGIDITC-GG--------LDYPYLGD 174 (609)
T ss_dssp EEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSS--CSEEEEC-SS--------SSCCCCCT
T ss_pred cEEEEee-EEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCC--CCeEEeC-CC--------CCccccCC
Confidence 4555333 89985431 01110 125889999999999999998532 222 221 11 12677777
Q ss_pred C------CceEEEeeeeeecCCCCceecccCCceEEEEcceeccc-----CeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 208 G------GSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHH-----NKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 208 g------s~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~f~~H-----~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+ ++||||++|.++...|..|.+ +.+.+|+|+||++.+. ..++-+|.. ..+|++.+|.|.
T Consensus 175 Gi~fd~~S~NV~I~Nc~I~~tGDDcIaI-ksseNI~I~Nc~~~gp~G~S~~~GIsIGsg-------s~NVtV~Nc~i~ 244 (609)
T 3gq8_A 175 GTTAPNPSENIWIENCEATGFGDDGITT-HHSQYINILNCYSHDPRLTANCNGFEIDDG-------SRHVVLSNNRSK 244 (609)
T ss_dssp TCCCSSCCEEEEEESCEEESCSSCSEEE-CSCEEEEEESCEEECCSSCSSCCSEEECTT-------CEEEEEESEEEE
T ss_pred CccccccceeEEEEeeEEEecCCCEEEe-cCCeeEEEEeEEEECCCCCCCcccEEccCC-------cccEEEEeeEEE
Confidence 7 999999999998766666675 5699999999999543 345666632 258999999995
No 16
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=98.33 E-value=7.2e-06 Score=77.03 Aligned_cols=102 Identities=15% Similarity=0.157 Sum_probs=76.8
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceE
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 236 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~I 236 (283)
..+|.+..++||.|+|++|.... +.. . .....|||.+.+++||+|.+|.++...|. +.++. +.+|
T Consensus 127 ~~~i~i~~~~nv~i~~~~I~~~~--~d~-------~----~~~ntDGid~~~s~nV~I~n~~i~~gDDc-Iaiks-g~nI 191 (339)
T 1ia5_A 127 VQVFSVAGSDYLTLKDITIDNSD--GDD-------N----GGHNTDAFDIGTSTYVTISGATVYNQDDC-VAVNS-GENI 191 (339)
T ss_dssp SCCEEEESCEEEEEESCEEECGG--GTT-------T----TCCSCCSEEEESCEEEEEESCEEECSSCS-EEESS-EEEE
T ss_pred cceEEEecccCeEEeeEEEECCc--ccc-------c----cCCCCCcEEecCCceEEEEeeEEEcCCCe-EEEeC-CeEE
Confidence 35688889999999999998521 100 0 01368999999999999999999987775 56554 5999
Q ss_pred EEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 237 TISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 237 TISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+|+||.+.... ++-+|+...+.......|++.++.|.
T Consensus 192 ~i~n~~~~~gh-GisiGS~g~~~~~~v~nV~v~n~~~~ 228 (339)
T 1ia5_A 192 YFSGGYCSGGH-GLSIGSVGGRSDNTVKNVTFVDSTII 228 (339)
T ss_dssp EEESCEEESSS-CEEEEEECSSSCCEEEEEEEEEEEEE
T ss_pred EEEeEEEECCc-eEEECcCCcccCCCEEEEEEEeeEEE
Confidence 99999999643 57888743333344679999999985
No 17
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=98.33 E-value=3.9e-06 Score=82.00 Aligned_cols=95 Identities=19% Similarity=0.286 Sum_probs=74.6
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccC----
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHG---- 232 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~g---- 232 (283)
..++.+..++||.|+||+|.... ...|||.+.+|+||+|++|.+..+.| .|.++.+
T Consensus 213 ~~~i~~~~~~nv~i~~v~I~~~~-------------------~NtDGidi~~s~nV~I~n~~i~~gDD-cIaiksg~~~d 272 (448)
T 3jur_A 213 MWCIHPVLSENVIIRNIEISSTG-------------------PNNDGIDPESCKYMLIEKCRFDTGDD-SVVIKSGRDAD 272 (448)
T ss_dssp SCSEEEESCEEEEEESCEEEECS-------------------TTCCSBCCBSCEEEEEESCEEEESSE-EEEEBCCCHHH
T ss_pred CceEeeeccCCEEEEeEEEeecc-------------------CCCccccccCCcCEEEEeeEEEeCCC-cEEeccCcccc
Confidence 45788889999999999998621 25799999999999999999998554 4566655
Q ss_pred -------CceEEEEccee--cccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 233 -------STAITISNNYM--THHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 233 -------s~~ITISnn~f--~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+.+|+|+||.+ ..-..++-+|+..+ +...+|++.++.|.
T Consensus 273 g~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~---~~v~nV~v~n~~~~ 320 (448)
T 3jur_A 273 GRRIGVPSEYILVRDNLVISQASHGGLVIGSEMS---GGVRNVVARNNVYM 320 (448)
T ss_dssp HHHHCCCEEEEEEESCEEECSSCSEEEEECSSCT---TCEEEEEEESCEEE
T ss_pred ccccCCCceeEEEEEeEEecCCCcceEEECCccc---CcEEEEEEEEEEEe
Confidence 79999999999 33233777887532 34678999999994
No 18
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=98.27 E-value=1.3e-05 Score=75.29 Aligned_cols=86 Identities=16% Similarity=0.227 Sum_probs=71.7
Q ss_pred eEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecC---------CCCceec
Q 023390 159 CITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNC---------NDGLIDA 229 (283)
Q Consensus 159 ~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~---------~DgliDv 229 (283)
.|.+.+++||.|++|++++. ...+|.+..++||.|+++++... .|| +|+
T Consensus 102 ~i~~~~~~nv~i~giti~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~ 159 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNT---------------------PVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDA-FDV 159 (339)
T ss_dssp CEEEEEEEEEEEECCEEECC---------------------SSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCS-EEE
T ss_pred EEEEeeeCcEEEEEEEEEeC---------------------CcceEEEeccCCEEEEEEEEECCccccccCCCCCc-EEE
Confidence 48888999999999999962 34789999999999999999874 566 474
Q ss_pred ccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEcC
Q 023390 230 IHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGE 275 (283)
Q Consensus 230 ~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~ 275 (283)
..+++|+|++|.|...+.+.-++++ .+|++.+|+|..
T Consensus 160 -~~s~nV~I~n~~i~~gDDciaiksg--------~nI~i~n~~~~~ 196 (339)
T 2iq7_A 160 -GSSTGVYISGANVKNQDDCLAINSG--------TNITFTGGTCSG 196 (339)
T ss_dssp -ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEES
T ss_pred -cCcceEEEEecEEecCCCEEEEcCC--------ccEEEEeEEEEC
Confidence 5799999999999987777777654 489999999963
No 19
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=98.25 E-value=1.7e-05 Score=74.41 Aligned_cols=86 Identities=17% Similarity=0.236 Sum_probs=71.9
Q ss_pred eEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecC---------CCCceec
Q 023390 159 CITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNC---------NDGLIDA 229 (283)
Q Consensus 159 ~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~---------~DgliDv 229 (283)
.|.+.+++||.|++|+|++. ...+|.+.+++||.|+++++... .|| +|+
T Consensus 106 ~i~~~~~~nv~i~~i~i~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~ 163 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNS---------------------PVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDA-FDI 163 (339)
T ss_dssp CEEEEEEEEEEEESCEEECC---------------------SSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCS-EEE
T ss_pred EEEEeecCcEEEEEEEEEcC---------------------CcceEEEecccCeEEeeEEEECCccccccCCCCCc-EEe
Confidence 48888999999999999962 35789999999999999999874 566 474
Q ss_pred ccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEcC
Q 023390 230 IHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGE 275 (283)
Q Consensus 230 ~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~ 275 (283)
..+++|+|++|.|...+.+.-++++ .+|++.+|++..
T Consensus 164 -~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ 200 (339)
T 1ia5_A 164 -GTSTYVTISGATVYNQDDCVAVNSG--------ENIYFSGGYCSG 200 (339)
T ss_dssp -ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEES
T ss_pred -cCCceEEEEeeEEEcCCCeEEEeCC--------eEEEEEeEEEEC
Confidence 5799999999999987777777654 389999999863
No 20
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=98.23 E-value=1e-05 Score=81.69 Aligned_cols=121 Identities=14% Similarity=0.100 Sum_probs=84.5
Q ss_pred CCCeEEEEeeeeEEEeCceEEecCCcEEEeeCCceEEeCCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCc
Q 023390 118 DEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRT 197 (283)
Q Consensus 118 ~~P~~IvF~~~g~I~L~~~L~i~snkTI~G~ga~~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~ 197 (283)
..|+-|.|...-.+ .|. ++||.- ++ ..+|.+.+++||.|+|++|.. . .
T Consensus 329 ~rP~~i~~~~~~nv------~I~-giti~n--s~-----~~~i~~~~~~nv~i~~v~i~~---~---------------~ 376 (608)
T 2uvf_A 329 RRSSLMTLRGVENV------YLA-GFTVRN--PA-----FHGIMNLENHNVVANGLIHQT---Y---------------D 376 (608)
T ss_dssp SSCCSEEEESEEEE------EEE-SCEEEC--CS-----SCSEEEESCEEEEEESCEEEC---T---------------T
T ss_pred CCCeEEEEEeeeeE------EEe-CcEEec--CC-----CCEEEEecCCCEEEeeEEEcC---C---------------C
Confidence 46888887653222 221 344433 12 467888899999999999863 1 0
Q ss_pred CCCCCeEEeeCCceEEEeeeeeecCCCCceecccC----------CceEEEEcceecccCeEEEeecCCCcCCCCceeEE
Q 023390 198 ISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHG----------STAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVT 267 (283)
Q Consensus 198 ~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~g----------s~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VT 267 (283)
....|||.+.+|+||+|++|.+..+.|. |.++.+ +.+|+|+||.+..-.-...+|+..+ ....+|+
T Consensus 377 ~~NtDGidi~~s~nV~I~n~~i~~gDD~-Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~---~~v~nI~ 452 (608)
T 2uvf_A 377 ANNGDGIEFGNSQNVMVFNNFFDTGDDC-INFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTG---AWIEDIL 452 (608)
T ss_dssp CTTCCSEEEESCEEEEEESCEEECSSCS-EEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCT---TCEEEEE
T ss_pred CCCCCeEEecCCceEEEEeeEEecCCce-EEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCC---CCEEEEE
Confidence 1358999999999999999999976554 354433 7899999999987444445887422 3356899
Q ss_pred EEceEEc
Q 023390 268 IAFNHFG 274 (283)
Q Consensus 268 ih~N~F~ 274 (283)
+.+|.|.
T Consensus 453 v~n~~~~ 459 (608)
T 2uvf_A 453 AENNVMY 459 (608)
T ss_dssp EESCEEE
T ss_pred EEeEEEE
Confidence 9999885
No 21
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=98.23 E-value=1.9e-05 Score=74.51 Aligned_cols=109 Identities=19% Similarity=0.260 Sum_probs=75.4
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCce-eecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCce
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNAN-VRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTA 235 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~-ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~ 235 (283)
..+|.+.+++||.|+|++|.... +... +. +.... .....|||.+.+++||+|.+|.++...|. +.++. +.+
T Consensus 127 ~~~i~i~~~~nv~i~~~~I~~~~--~~~~~~~-~~~~~---~~~NtDGid~~~s~nV~I~n~~i~~gDDc-Iaiks-g~n 198 (349)
T 1hg8_A 127 VHCFDITGSSQLTISGLILDNRA--GDKPNAK-SGSLP---AAHNTDGFDISSSDHVTLDNNHVYNQDDC-VAVTS-GTN 198 (349)
T ss_dssp SEEEEEESCEEEEEEEEEEECGG--GSSCCTT-TTTSC---SCCSCCSEEEESCEEEEEEEEEEECSSCS-EEESS-EEE
T ss_pred CceEEEeccCCEEEEEEEEECCC--Ccccccc-ccccc---cCCCCCeEEEccccEEEEEeeEEecCCCe-EEeeC-CeE
Confidence 35788889999999999998521 1000 00 00000 01468999999999999999999976665 57554 599
Q ss_pred EEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 236 ITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 236 ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
|+|+||.+.... ++-+|+.-.+......+|++.+|.|.
T Consensus 199 I~i~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~ 236 (349)
T 1hg8_A 199 IVVSNMYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVV 236 (349)
T ss_dssp EEEEEEEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEE
T ss_pred EEEEeEEEeCCc-ceEEccccccccCCEEEEEEEEEEEE
Confidence 999999998533 57778742222234678999998884
No 22
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=98.22 E-value=1.4e-05 Score=74.86 Aligned_cols=101 Identities=18% Similarity=0.268 Sum_probs=75.5
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceE
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 236 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~I 236 (283)
..+|.+. ++||.|+|++|.... +.. ......|||.+..++||+|.+|.++...|.. .++. +.+|
T Consensus 123 ~~~i~i~-~~nv~i~~~~I~~~~--~d~-----------~~~~ntDGidi~~s~nV~I~n~~i~~gDDci-aiks-g~nI 186 (336)
T 1nhc_A 123 VQAISVQ-ATNVHLNDFTIDNSD--GDD-----------NGGHNTDGFDISESTGVYISGATVKNQDDCI-AINS-GESI 186 (336)
T ss_dssp SCCEEEE-EEEEEEESCEEECTT--HHH-----------HTCCSCCSEEECSCEEEEEESCEEESSSEEE-EESS-EEEE
T ss_pred ccEEEEE-eCCEEEEEEEEECCC--ccc-----------ccCCCCCcEEecCCCeEEEEeCEEEcCCCEE-EEeC-CeEE
Confidence 3568898 999999999998521 000 0013689999999999999999999887754 6554 5999
Q ss_pred EEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 237 TISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 237 TISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+|+||.+.... ++.+|+...+.......|++.++.|.
T Consensus 187 ~i~n~~~~~gh-GisiGS~g~~~~~~v~nV~v~n~~~~ 223 (336)
T 1nhc_A 187 SFTGGTCSGGH-GLSIGSVGGRDDNTVKNVTISDSTVS 223 (336)
T ss_dssp EEESCEEESSS-EEEEEEESSSSCCEEEEEEEEEEEEE
T ss_pred EEEeEEEECCc-CceEccCccccCCCEEEEEEEeeEEE
Confidence 99999999643 57888743333334678999999984
No 23
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=98.21 E-value=2.3e-05 Score=73.51 Aligned_cols=84 Identities=18% Similarity=0.338 Sum_probs=70.8
Q ss_pred eEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecC---------CCCceec
Q 023390 159 CITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNC---------NDGLIDA 229 (283)
Q Consensus 159 ~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~---------~DgliDv 229 (283)
.|.+.+++||.|++|+|++. ..-+|.+. ++||.|+++++... .|| +|+
T Consensus 102 ~i~~~~~~nv~i~~i~i~ns---------------------p~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDG-idi 158 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNT---------------------PVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDG-FDI 158 (336)
T ss_dssp CEEEEEEEEEEEESCEEECC---------------------SSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCS-EEE
T ss_pred EEEEeeeCcEEEEEEEEEeC---------------------CccEEEEE-eCCEEEEEEEEECCCcccccCCCCCc-EEe
Confidence 47888999999999999962 23469999 99999999999874 677 584
Q ss_pred ccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 230 IHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 230 ~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
..+++|+|++|.|...+.+.-++++ .+|++.+|++.
T Consensus 159 -~~s~nV~I~n~~i~~gDDciaiksg--------~nI~i~n~~~~ 194 (336)
T 1nhc_A 159 -SESTGVYISGATVKNQDDCIAINSG--------ESISFTGGTCS 194 (336)
T ss_dssp -CSCEEEEEESCEEESSSEEEEESSE--------EEEEEESCEEE
T ss_pred -cCCCeEEEEeCEEEcCCCEEEEeCC--------eEEEEEeEEEE
Confidence 5799999999999988888878764 48999999986
No 24
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=98.16 E-value=2.1e-05 Score=74.67 Aligned_cols=101 Identities=14% Similarity=0.131 Sum_probs=73.8
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceE
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 236 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~I 236 (283)
..+|.+. ++||.|+|++|.... ++. .+ ....|||.+..++||+|.+|.++...|. +.++. ..+|
T Consensus 149 ~~~i~i~-~~nv~i~~~~I~~~~--~d~-------~~----~~NtDGidi~~s~nV~I~n~~i~~gDDc-Iaiks-g~nI 212 (362)
T 1czf_A 149 LMAFSVQ-ANDITFTDVTINNAD--GDT-------QG----GHNTDAFDVGNSVGVNIIKPWVHNQDDC-LAVNS-GENI 212 (362)
T ss_dssp SCCEEEE-CSSEEEESCEEECGG--GGT-------TT----CCSCCSEEECSCEEEEEESCEEECSSCS-EEESS-EEEE
T ss_pred ccEEEEe-eCCEEEEEEEEECCc--ccc-------cc----CCCCCceeecCcceEEEEeeEEecCCCE-EEEeC-CeEE
Confidence 3567788 899999999988521 100 00 1468999999999999999999988775 46554 4999
Q ss_pred EEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 237 TISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 237 TISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+|+||.+.... ++-+|+.-.+......+|++.++.|.
T Consensus 213 ~i~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~ 249 (362)
T 1czf_A 213 WFTGGTCIGGH-GLSIGSVGDRSNNVVKNVTIEHSTVS 249 (362)
T ss_dssp EEESCEEESSC-CEEEEEECSSSCCEEEEEEEEEEEEE
T ss_pred EEEEEEEeCCc-eeEEeeccccCCCCEEEEEEEeeEEE
Confidence 99999999743 58888742222234678999998884
No 25
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=98.14 E-value=2.4e-05 Score=75.64 Aligned_cols=70 Identities=14% Similarity=0.253 Sum_probs=55.7
Q ss_pred CCCeEEeeCCceEEEeeeeeecCCCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 200 DGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 200 ~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+.|||.+.. +||+|.+|.+..+.| .|.++.++.+|+|+||.+.... ++-+|+...+ ....+|++.+|.|.
T Consensus 175 ntDGidi~~-~nV~I~n~~i~~gDD-~Iai~s~~~nI~I~n~~~~~~~-GisIGS~g~~--~~v~nV~v~n~~~~ 244 (422)
T 1rmg_A 175 GLDGIDVWG-SNIWVHDVEVTNKDE-CVTVKSPANNILVESIYCNWSG-GCAMGSLGAD--TDVTDIVYRNVYTW 244 (422)
T ss_dssp TCCSEEEEE-EEEEEEEEEEESSSE-EEEEEEEEEEEEEEEEEEESSS-EEEEEEECTT--EEEEEEEEEEEEEE
T ss_pred CCccEeecC-CeEEEEeeEEeCCCC-eEEeCCCCcCEEEEeEEEcCCc-ceeecccCCC--CcEEEEEEEeEEEe
Confidence 589999999 999999999987655 4677778999999999988654 7777874321 12568999999984
No 26
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=98.12 E-value=1.8e-05 Score=75.16 Aligned_cols=108 Identities=12% Similarity=0.152 Sum_probs=80.9
Q ss_pred eEEecC--CcEEEeeCCceEEe-------CCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEe
Q 023390 136 ELIMNS--FKTIDGRGASVHIA-------GGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSI 206 (283)
Q Consensus 136 ~L~i~s--nkTI~G~ga~~~I~-------~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I 206 (283)
.+.|.. .-||+|+|..-.=. .-..|.+.+++||.|++|++++. ..-+|.+
T Consensus 96 nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~ns---------------------p~~~i~i 154 (362)
T 1czf_A 96 HITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNT---------------------PLMAFSV 154 (362)
T ss_dssp SCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECC---------------------SSCCEEE
T ss_pred cEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecC---------------------CccEEEE
Confidence 455532 45777777531000 01247888999999999999962 2346999
Q ss_pred eCCceEEEeeeeeecC---------CCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEcC
Q 023390 207 FGGSHVWVDHCSLSNC---------NDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGE 275 (283)
Q Consensus 207 ~gs~nVWIDHcs~s~~---------~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~ 275 (283)
. ++||.|+++.+... .|| +|+ ..+++|+|+||.|...+.+.-++++ .+|++.+|++..
T Consensus 155 ~-~~nv~i~~~~I~~~~~d~~~~~NtDG-idi-~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ 221 (362)
T 1czf_A 155 Q-ANDITFTDVTINNADGDTQGGHNTDA-FDV-GNSVGVNIIKPWVHNQDDCLAVNSG--------ENIWFTGGTCIG 221 (362)
T ss_dssp E-CSSEEEESCEEECGGGGTTTCCSCCS-EEE-CSCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEES
T ss_pred e-eCCEEEEEEEEECCccccccCCCCCc-eee-cCcceEEEEeeEEecCCCEEEEeCC--------eEEEEEEEEEeC
Confidence 9 99999999999863 567 474 5799999999999998888888764 389999999863
No 27
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=98.03 E-value=6.9e-05 Score=72.44 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=80.9
Q ss_pred ecCCcEEEeeCCceE---EeCCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEe
Q 023390 139 MNSFKTIDGRGASVH---IAGGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVD 215 (283)
Q Consensus 139 i~snkTI~G~ga~~~---I~~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWID 215 (283)
|...-||+|+|..-. -..-..|.+.+++||.|++|+|++. ...+|.+.+++||.|+
T Consensus 106 i~G~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~ns---------------------p~~~i~i~~~~nv~I~ 164 (422)
T 1rmg_A 106 STSKGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDA---------------------PAFHFTMDTCSDGEVY 164 (422)
T ss_dssp SSSCCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECC---------------------SSCSEEEEEEEEEEEE
T ss_pred eccCEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECC---------------------CceEEEEeCcCCEEEE
Confidence 344568999885310 0012357788999999999999962 2468999999999999
Q ss_pred eeeeec----CCCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 216 HCSLSN----CNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 216 Hcs~s~----~~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+|.+.. ..||. |+.. ++|+|+||.|...+.+.-+++. ..+|++.+|+|.
T Consensus 165 n~~I~~~d~~ntDGi-di~~--~nV~I~n~~i~~gDD~Iai~s~-------~~nI~I~n~~~~ 217 (422)
T 1rmg_A 165 NMAIRGGNEGGLDGI-DVWG--SNIWVHDVEVTNKDECVTVKSP-------ANNILVESIYCN 217 (422)
T ss_dssp EEEEECCSSTTCCSE-EEEE--EEEEEEEEEEESSSEEEEEEEE-------EEEEEEEEEEEE
T ss_pred eEEEECCCCCCCccE-eecC--CeEEEEeeEEeCCCCeEEeCCC-------CcCEEEEeEEEc
Confidence 999997 46774 7654 9999999999988888888762 348999999885
No 28
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=97.97 E-value=6.8e-05 Score=70.44 Aligned_cols=100 Identities=22% Similarity=0.330 Sum_probs=73.8
Q ss_pred CCeEEEEeecc-EEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCce
Q 023390 157 GPCITVQYVTN-IIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTA 235 (283)
Q Consensus 157 G~~i~i~~a~N-VIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~ 235 (283)
...|.+..++| |.|+|++|.... ++. .. ...+.|||.+ .++||+|.+|.++...| .+.++.+ .+
T Consensus 119 ~~~i~i~~~~n~v~i~~v~I~~~~--~d~--------~~--~~~NtDGidi-~s~nV~I~n~~i~~gDD-cIaiksg-~n 183 (335)
T 1k5c_A 119 AQAISVGPTDAHLTLDGITVDDFA--GDT--------KN--LGHNTDGFDV-SANNVTIQNCIVKNQDD-CIAINDG-NN 183 (335)
T ss_dssp SCCEEEEEEEEEEEEESCEEECGG--GGG--------GG--CCCSCCSEEE-ECSSEEEESCEEESSSC-SEEEEEE-EE
T ss_pred cceEEEEccCCeEEEEEEEEECCC--Ccc--------cc--cCCCCCeEcc-cCCeEEEEeeEEEcCCC-EEEeeCC-ee
Confidence 35688889999 999999999521 100 00 0136899999 99999999999997666 4576664 99
Q ss_pred EEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 236 ITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 236 ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
|+|+||.+.... ++-+|+... .....+|++.++.|.
T Consensus 184 I~i~n~~~~~gh-GisIGS~g~--~~~v~nV~v~n~~~~ 219 (335)
T 1k5c_A 184 IRFENNQCSGGH-GISIGSIAT--GKHVSNVVIKGNTVT 219 (335)
T ss_dssp EEEESCEEESSC-CEEEEEECT--TCEEEEEEEESCEEE
T ss_pred EEEEEEEEECCc-cCeEeeccC--CCCEEEEEEEeeEEE
Confidence 999999999743 577887532 123568899888884
No 29
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.90 E-value=0.00022 Score=67.16 Aligned_cols=107 Identities=21% Similarity=0.271 Sum_probs=79.6
Q ss_pred eEEecC--CcEEEeeCCceE----------EeCCCeEEE-E-eeccEEEEeeEEEecccCCCceeecCCCccccCcCCCC
Q 023390 136 ELIMNS--FKTIDGRGASVH----------IAGGPCITV-Q-YVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDG 201 (283)
Q Consensus 136 ~L~i~s--nkTI~G~ga~~~----------I~~G~~i~i-~-~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~ 201 (283)
.|.|.. .-||+|+|..-- .. -..|++ . .++||.|++|++++. ..
T Consensus 70 ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~r-P~~i~~~~~~~~nv~I~giti~ns---------------------p~ 127 (349)
T 1hg8_A 70 NITITGASGHVIDGNGQAYWDGKGSNSNSNQK-PDHFIVVQKTTGNSKITNLNIQNW---------------------PV 127 (349)
T ss_dssp SCEEEECTTCEEECCGGGTCCSCTTCTTSCCC-CSEEEEEEEEESSEEEESCEEECC---------------------SS
T ss_pred cEEEEecCCCEEcCCcchhhhcccccCCCCCC-CeEEEEeecCcCcEEEEEEEEEcC---------------------CC
Confidence 455532 458888875210 01 125778 7 677999999999962 34
Q ss_pred CeEEeeCCceEEEeeeeeecC-----------------CCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCce
Q 023390 202 DGVSIFGGSHVWVDHCSLSNC-----------------NDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNM 264 (283)
Q Consensus 202 DaI~I~gs~nVWIDHcs~s~~-----------------~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~ 264 (283)
.+|.+.+++||.|+++++... .|| +|+ ..+++|+|++|.+...+.+.-++++ .
T Consensus 128 ~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDG-id~-~~s~nV~I~n~~i~~gDDcIaiksg--------~ 197 (349)
T 1hg8_A 128 HCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDG-FDI-SSSDHVTLDNNHVYNQDDCVAVTSG--------T 197 (349)
T ss_dssp EEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCS-EEE-ESCEEEEEEEEEEECSSCSEEESSE--------E
T ss_pred ceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCe-EEE-ccccEEEEEeeEEecCCCeEEeeCC--------e
Confidence 689999999999999999863 455 364 5799999999999988777777654 3
Q ss_pred eEEEEceEEc
Q 023390 265 QVTIAFNHFG 274 (283)
Q Consensus 265 ~VTih~N~F~ 274 (283)
+|++.+|+|.
T Consensus 198 nI~i~n~~~~ 207 (349)
T 1hg8_A 198 NIVVSNMYCS 207 (349)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEeEEEe
Confidence 8999999886
No 30
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.90 E-value=0.00012 Score=69.43 Aligned_cols=93 Identities=16% Similarity=0.243 Sum_probs=73.0
Q ss_pred CeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeec-----CCCCceecccC
Q 023390 158 PCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSN-----CNDGLIDAIHG 232 (283)
Q Consensus 158 ~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~-----~~DgliDv~~g 232 (283)
..|.+.+++||.|++|+|++. ..-++.+.++++|.|+++++.. -.||. |+ ..
T Consensus 152 ~~i~~~~~~nv~I~~iti~ns---------------------p~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGi-d~-~~ 208 (376)
T 1bhe_A 152 RLIQINKSKNFTLYNVSLINS---------------------PNFHVVFSDGDGFTAWKTTIKTPSTARNTDGI-DP-MS 208 (376)
T ss_dssp CSEEEESCEEEEEEEEEEECC---------------------SSCSEEEESCEEEEEEEEEEECCTTCSSCCSE-EE-ES
T ss_pred eEEEEEcceEEEEEeEEEECC---------------------CcEEEEEeCCCcEEEEeEEEECCCCCCCCceE-ee-cC
Confidence 358899999999999999972 2246888899999999999987 36775 74 57
Q ss_pred CceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEcC
Q 023390 233 STAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGE 275 (283)
Q Consensus 233 s~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~ 275 (283)
|++|+|++|.|...+.+.-+.+... .....+|++.+|+|..
T Consensus 209 s~nV~I~n~~i~~gDDcIaiks~~~--~~~s~nI~I~n~~~~~ 249 (376)
T 1bhe_A 209 SKNITIAYSNIATGDDNVAIKAYKG--RAETRNISILHNDFGT 249 (376)
T ss_dssp CEEEEEESCEEECSSCSEEEEECTT--SCCEEEEEEEEEEECS
T ss_pred CceEEEEeCEEecCCCeEEEcccCC--CCCceEEEEEeeEEEc
Confidence 9999999999998887776664210 1125689999999963
No 31
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.78 E-value=0.00042 Score=66.65 Aligned_cols=132 Identities=15% Similarity=0.180 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCCCCCCCCC-----chhHHHhhhcCCC-eEEEEeeeeEEE--eC----ceEEe-cC-----CcEEEeeC
Q 023390 88 KDGKIYVVTDSGDDDPVNPK-----PGTLRYAVIQDEP-LWIIFARDMVIT--LK----EELIM-NS-----FKTIDGRG 149 (283)
Q Consensus 88 ~gG~v~~VT~~~d~d~~~~~-----pGtLr~av~~~~P-~~IvF~~~g~I~--L~----~~L~i-~s-----nkTI~G~g 149 (283)
..++.|+|.....| .+++ |-||.+|+.+-.| -+|++. .|+.+ +. ..|.+ .+ .+||.|.+
T Consensus 12 ~~~~~~yVsp~Gsd--~~~G~t~~~P~tiq~Ai~~a~pGdtI~l~-~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~~ 88 (400)
T 1ru4_A 12 STKRIYYVAPNGNS--SNNGSSFNAPMSFSAAMAAVNPGELILLK-PGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAAN 88 (400)
T ss_dssp CCSCEEEECTTCCT--TCCSSSTTSCBCHHHHHHHCCTTCEEEEC-SEEEECCCBTTBCCCEEECCCCBTTBCEEEEEGG
T ss_pred cCccEEEEcCCCCC--CCCCccccCCccHHHHHhhCCCCCEEEEC-CCeEccccccccceeEEecCCCCCCCCEEEEEec
Confidence 34567777532222 1222 4499999976433 344443 56777 43 34555 33 38888874
Q ss_pred -CceEEeCC----------CeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeee
Q 023390 150 -ASVHIAGG----------PCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCS 218 (283)
Q Consensus 150 -a~~~I~~G----------~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs 218 (283)
..+.|..+ .+|+| .++++.|++|+|++.. ..||.+.+ +++.|++|.
T Consensus 89 g~~~vI~~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g---------------------~~GI~v~g-s~~~i~n~~ 145 (400)
T 1ru4_A 89 CGRAVFDFSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAG---------------------YQGAYVIG-SHNTFENTA 145 (400)
T ss_dssp GCCEEEECCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCS---------------------SCSEEECS-SSCEEESCE
T ss_pred CCCCEEeCCccCCccccceeEEEE-ECCeEEEEeEEEEeCC---------------------CCcEEEeC-CCcEEEeEE
Confidence 34556421 45878 7899999999998621 12677665 555677777
Q ss_pred eecCCCCceecccCCceEEEEcceecc
Q 023390 219 LSNCNDGLIDAIHGSTAITISNNYMTH 245 (283)
Q Consensus 219 ~s~~~DgliDv~~gs~~ITISnn~f~~ 245 (283)
|....|.-|.+...+.+.+|.+|.+.+
T Consensus 146 i~~n~~~GI~l~~~~s~n~I~nn~i~~ 172 (400)
T 1ru4_A 146 FHHNRNTGLEINNGGSYNTVINSDAYR 172 (400)
T ss_dssp EESCSSCSEEECTTCCSCEEESCEEEC
T ss_pred EECCCceeEEEEcccCCeEEEceEEEc
Confidence 777766434544445566777776653
No 32
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=97.67 E-value=0.00023 Score=66.76 Aligned_cols=106 Identities=12% Similarity=0.162 Sum_probs=80.5
Q ss_pred eEEecC-CcEEEeeCCce---------EEeCCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEE
Q 023390 136 ELIMNS-FKTIDGRGASV---------HIAGGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVS 205 (283)
Q Consensus 136 ~L~i~s-nkTI~G~ga~~---------~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~ 205 (283)
.+.|.. .=||+|+|..- ... -..|.+.+++ |.|++|++++. ....|.
T Consensus 67 ni~I~G~~G~idG~G~~ww~~~~~~~~~~r-P~~i~~~~~~-v~i~giti~ns---------------------p~~~i~ 123 (335)
T 1k5c_A 67 GINFVGADHIFDGNGALYWDGKGTNNGTHK-PHPFLKIKGS-GTYKKFEVLNS---------------------PAQAIS 123 (335)
T ss_dssp EEEEECTTCEEECCGGGTCCSCTTTSSSCC-CCCSEEEEEE-EEEESCEEESC---------------------SSCCEE
T ss_pred CEEEEeCccEEcCChhHhhhcccccCCCCC-CeEEEEeceE-EEEEEEEEECC---------------------CcceEE
Confidence 566644 46899998531 001 1236777888 99999999962 345799
Q ss_pred eeCCce-EEEeeeeeecC----------CCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEEc
Q 023390 206 IFGGSH-VWVDHCSLSNC----------NDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 206 I~gs~n-VWIDHcs~s~~----------~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+.+++| |.|+++.+... .||. |+ .+++|+|+||.|..-+.+.-+++. .+|++.++++.
T Consensus 124 i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGi-di--~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~ 192 (335)
T 1k5c_A 124 VGPTDAHLTLDGITVDDFAGDTKNLGHNTDGF-DV--SANNVTIQNCIVKNQDDCIAINDG--------NNIRFENNQCS 192 (335)
T ss_dssp EEEEEEEEEEESCEEECGGGGGGGCCCSCCSE-EE--ECSSEEEESCEEESSSCSEEEEEE--------EEEEEESCEEE
T ss_pred EEccCCeEEEEEEEEECCCCcccccCCCCCeE-cc--cCCeEEEEeeEEEcCCCEEEeeCC--------eeEEEEEEEEE
Confidence 999999 99999999874 4664 86 799999999999988877777653 38999999986
Q ss_pred C
Q 023390 275 E 275 (283)
Q Consensus 275 ~ 275 (283)
.
T Consensus 193 ~ 193 (335)
T 1k5c_A 193 G 193 (335)
T ss_dssp S
T ss_pred C
Confidence 3
No 33
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=97.66 E-value=0.00055 Score=67.21 Aligned_cols=105 Identities=11% Similarity=0.032 Sum_probs=69.4
Q ss_pred eEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCce-ecccCCceEE
Q 023390 159 CITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLI-DAIHGSTAIT 237 (283)
Q Consensus 159 ~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~Dgli-Dv~~gs~~IT 237 (283)
.|.+.+++||.|++|+|.+. |. +.. ...++. .+.|||.+ .++||+|.+|.+....|+.- .....+.+|+
T Consensus 134 ~i~~~~~~Nv~I~gIti~n~--w~---ih~-s~~V~i---~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~ 203 (464)
T 1h80_A 134 VFKLGDVRNYKISNFTIDDN--KT---IFA-SILVDV---TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNIL 203 (464)
T ss_dssp EEEECSEEEEEEEEEEEECC--SC---BSC-SEEECE---EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEE
T ss_pred EEEEEeeccEEEeeeEEecc--ce---Eee-ceeeee---ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEE
Confidence 36778899999999999972 21 110 001111 25688887 78999999999999877552 2255789999
Q ss_pred EEcceecccCeEEEeecCC----CcCCCCceeEEEEceEEc
Q 023390 238 ISNNYMTHHNKVMLLGHSD----TFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 238 ISnn~f~~H~k~~LiG~sd----~~~~D~~~~VTih~N~F~ 274 (283)
|+||+|.. ..++-+-..+ ........+|+|.++.|.
T Consensus 204 V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~ 243 (464)
T 1h80_A 204 FRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCS 243 (464)
T ss_dssp EEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEE
T ss_pred EEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEE
Confidence 99999888 4444443321 011122568888888884
No 34
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.66 E-value=0.0011 Score=61.68 Aligned_cols=82 Identities=11% Similarity=0.078 Sum_probs=52.5
Q ss_pred eeccEEEEeeEEEecccCCCce------eecCCCccccCcCCCCCeEEeeCCceEEEeee-eeecCCCCceecccCCceE
Q 023390 164 YVTNIIIHGINIHDCKRGGNAN------VRDSPSHYGWRTISDGDGVSIFGGSHVWVDHC-SLSNCNDGLIDAIHGSTAI 236 (283)
Q Consensus 164 ~a~NVIIrnL~i~~~~~~g~~~------ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHc-s~s~~~DgliDv~~gs~~I 236 (283)
.++|+.|++++|++...++-.. +....... .....|||.+..++++-|.+| .+....||+ ++..+++++
T Consensus 132 ~~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~---~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI-~~~~~s~~v 207 (377)
T 2pyg_A 132 ADRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVA---HDNGLDGFVADYLVDSVFENNVAYANDRHGF-NVVTSTHDF 207 (377)
T ss_dssp CEEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEE---ESCSSCSEEEESEEEEEEESCEEESCSSCSE-EEETTCEEE
T ss_pred cccceEEEeEEEEecccceEEeecccCCeEEEeEEe---ecCCCCceeEeccCCcEEECcEEEccccCcE-EEEeccCCe
Confidence 4688888888888653222100 00000000 014679999998888999998 445556665 656678999
Q ss_pred EEEcceecccCeE
Q 023390 237 TISNNYMTHHNKV 249 (283)
Q Consensus 237 TISnn~f~~H~k~ 249 (283)
+|++|.+.+...+
T Consensus 208 ~I~nN~i~~~~~g 220 (377)
T 2pyg_A 208 VMTNNVAYGNGSS 220 (377)
T ss_dssp EEESCEEESCSSC
T ss_pred EEECCEEECccCc
Confidence 9999999865443
No 35
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=97.62 E-value=0.00045 Score=69.51 Aligned_cols=102 Identities=16% Similarity=0.050 Sum_probs=69.4
Q ss_pred eeccEEEEeeEEEecccCCCc-----ee--ecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceE
Q 023390 164 YVTNIIIHGINIHDCKRGGNA-----NV--RDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 236 (283)
Q Consensus 164 ~a~NVIIrnL~i~~~~~~g~~-----~i--r~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~I 236 (283)
+++||.|++|++.+...|.-. .+ ....-+.-.......|||.++ +||.|.+|.|+.+.| .|.++ +.+|
T Consensus 331 ~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~gDD-cIaIk--s~NI 405 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVNDD-AIKIY--YSGA 405 (574)
T ss_dssp SSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEESSC-SEECC--STTC
T ss_pred CceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECCCC-EEEEC--CccE
Confidence 789999999999875333111 11 100000000001238999998 999999999999999 44654 4999
Q ss_pred EEEcceec-ccCeE-EEeecCCCcCCCCceeEEEEceEEc
Q 023390 237 TISNNYMT-HHNKV-MLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 237 TISnn~f~-~H~k~-~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+|+||.+. .|..+ +-+|++. ....+|+|.++.|.
T Consensus 406 ~I~nc~i~~g~g~g~IsIGS~~----g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 406 SVSRATIWKCHNDPIIQMGWTS----RDISGVTIDTLNVI 441 (574)
T ss_dssp EEEEEEEEECSSSCSEECCSSC----CCEEEEEEEEEEEE
T ss_pred EEEeEEEECCCCCceEEEcCCC----CcEEEEEEEeEEEE
Confidence 99999987 56665 7889742 33568888888884
No 36
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.50 E-value=0.00076 Score=65.76 Aligned_cols=92 Identities=12% Similarity=0.160 Sum_probs=72.2
Q ss_pred eEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeec---CCCCceecccCCce
Q 023390 159 CITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSN---CNDGLIDAIHGSTA 235 (283)
Q Consensus 159 ~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~---~~DgliDv~~gs~~ 235 (283)
.|.+.+++||.|++|++++. ..=++.+..++||.|+++.+.. -.||. |+ ..|++
T Consensus 192 ~i~~~~~~nv~i~giti~ns---------------------p~~~i~~~~~~nv~i~~v~I~~~~~NtDGi-di-~~s~n 248 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINS---------------------PMWCIHPVLSENVIIRNIEISSTGPNNDGI-DP-ESCKY 248 (448)
T ss_dssp SEEEESCEEEEEESCEEESC---------------------SSCSEEEESCEEEEEESCEEEECSTTCCSB-CC-BSCEE
T ss_pred EEEEEcccceEEEeeEEEeC---------------------CCceEeeeccCCEEEEeEEEeeccCCCccc-cc-cCCcC
Confidence 47889999999999999962 2247888999999999999986 57887 74 46999
Q ss_pred EEEEcceecccCeEEEeecCCCc-C---CCCceeEEEEceEE
Q 023390 236 ITISNNYMTHHNKVMLLGHSDTF-T---QDKNMQVTIAFNHF 273 (283)
Q Consensus 236 ITISnn~f~~H~k~~LiG~sd~~-~---~D~~~~VTih~N~F 273 (283)
|+|++|.|...+.+.-+.+.... . .-...+|++.++++
T Consensus 249 V~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~ 290 (448)
T 3jur_A 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLV 290 (448)
T ss_dssp EEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEE
T ss_pred EEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEE
Confidence 99999999998888777654211 0 00135899999998
No 37
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.25 E-value=0.0018 Score=65.52 Aligned_cols=90 Identities=14% Similarity=0.093 Sum_probs=66.2
Q ss_pred eeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCC----CCceecccCCceEEEE
Q 023390 164 YVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCN----DGLIDAIHGSTAITIS 239 (283)
Q Consensus 164 ~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~----DgliDv~~gs~~ITIS 239 (283)
.++||.|+|-+|++ ..+|+|.|.+++||+|.+|.+.... ..-+.+..++.+|||+
T Consensus 181 ~S~NV~I~Nc~I~~---------------------tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~ 239 (609)
T 3gq8_A 181 PSENIWIENCEATG---------------------FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLS 239 (609)
T ss_dssp CCEEEEEESCEEES---------------------CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEE
T ss_pred cceeEEEEeeEEEe---------------------cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEE
Confidence 38999999999974 2469999999999999999995442 2234555667999999
Q ss_pred cceecccCeEEEeecCCCcCCCCceeEEEEceEEcCC
Q 023390 240 NNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEG 276 (283)
Q Consensus 240 nn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~~ 276 (283)
||.|.+...+.-|=..+... ....|.+.+|++.++
T Consensus 240 Nc~i~nt~~GIrIKt~~~~~--~v~NV~I~n~vs~~n 274 (609)
T 3gq8_A 240 NNRSKGCYGGIEIKAHGDAP--AAYNISINGHMSVED 274 (609)
T ss_dssp SEEEESSSEEEEEEECTTSC--CCEEEEEEEEEEESC
T ss_pred eeEEECCCCEEEEEecCCCC--ccccEEEECCEeecC
Confidence 99999988877664332211 145788888777544
No 38
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.24 E-value=0.0021 Score=66.44 Aligned_cols=90 Identities=14% Similarity=0.093 Sum_probs=65.9
Q ss_pred eeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCC----CCceecccCCceEEEE
Q 023390 164 YVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCN----DGLIDAIHGSTAITIS 239 (283)
Q Consensus 164 ~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~----DgliDv~~gs~~ITIS 239 (283)
.++||.|+|-+|++ ...|+|.|.+++||+|.+|.+.... ..-+.+..++.+|||+
T Consensus 181 ~S~NV~I~Nc~I~n---------------------tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~ 239 (772)
T 3gqn_A 181 PSENIWIENCEATG---------------------FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLS 239 (772)
T ss_dssp CCEEEEEESCEEES---------------------CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEE
T ss_pred ccceEEEEeeEEEe---------------------cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEE
Confidence 48999999999974 2469999999999999999995432 2334555677999999
Q ss_pred cceecccCeEEEeecCCCcCCCCceeEEEEceEEcCC
Q 023390 240 NNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEG 276 (283)
Q Consensus 240 nn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F~~~ 276 (283)
||.|.+...++-|=...... ...+|.+.+|+..++
T Consensus 240 Nc~~~nT~nGIRIKt~~~gg--~v~NV~I~gnis~~d 274 (772)
T 3gqn_A 240 NNRSKGCYGGIEIKAHGDAP--AAYNISINGHMSVED 274 (772)
T ss_dssp EEEEESSSEEEEECCCTTSC--CCEEEEEEEEEEESC
T ss_pred ceEEECCCcEEEEEEeCCCC--ccccEEEECCEEecc
Confidence 99999988877664332211 145777777776543
No 39
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=97.23 E-value=0.0019 Score=65.03 Aligned_cols=146 Identities=11% Similarity=0.092 Sum_probs=83.9
Q ss_pred CchhHHHhhhcCCCeEEEEeeeeEEEe-----------C-ceEEecCCcE-EEeeCCceEEeCCCeEEEEeeccEEEEee
Q 023390 107 KPGTLRYAVIQDEPLWIIFARDMVITL-----------K-EELIMNSFKT-IDGRGASVHIAGGPCITVQYVTNIIIHGI 173 (283)
Q Consensus 107 ~pGtLr~av~~~~P~~IvF~~~g~I~L-----------~-~~L~i~snkT-I~G~ga~~~I~~G~~i~i~~a~NVIIrnL 173 (283)
.||.+.. ....++-.|+|-. |+..+ . ..|.+.||+| +.-. +.+.|. |. |.+.+++||.|.+=
T Consensus 219 ~~g~~~~-~~~~ggg~v~vP~-G~yl~~~~~~~gpc~~g~G~i~lkSnvt~L~L~-~GA~l~-g~-i~~~~~~nv~ItG~ 293 (574)
T 1ogo_X 219 TPGPINN-GDWGAKSILYFPP-GVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLA-PGAYVK-GA-IEYFTKQNFYATGH 293 (574)
T ss_dssp CSEEECT-TTTCSSSEEEECS-EEEEECBCTTCCBSCSSSCCEECCTTCCEEEEC-TTEEEE-SC-EEECCSSCEEEESS
T ss_pred ccccccc-cccCCCCEEEECC-cEEEEeccccCCcccccceEEEecCCCceEEec-CCcEEE-cc-EEEeCceeEEEEeC
Confidence 4555553 3445667777755 55544 2 4688888888 6542 123455 33 66667777777664
Q ss_pred EEEecccCCCceee----------cCCCcc-------------------ccCcCCCCCeEEeeCCceE--EEeeeeeec-
Q 023390 174 NIHDCKRGGNANVR----------DSPSHY-------------------GWRTISDGDGVSIFGGSHV--WVDHCSLSN- 221 (283)
Q Consensus 174 ~i~~~~~~g~~~ir----------~~~~~~-------------------g~r~~~~~DaI~I~gs~nV--WIDHcs~s~- 221 (283)
-+-+.. |..+-. ..|..+ ... .+..-.|.+..|+|| .|++++...
T Consensus 294 GtIDG~--G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~-NSp~w~i~~~~c~nV~~~I~nv~i~~~ 370 (574)
T 1ogo_X 294 GILSGE--NYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTIN-APPFNTMDFNGNSGISSQISDYKQVGA 370 (574)
T ss_dssp CEEECT--TSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEE-CCSSCSEEECSSSCEEEEEEEEEEECC
T ss_pred EEEeCC--CcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEE-CCCCcEEeecCCCChhhEEEeeEeeCC
Confidence 333221 000000 000000 000 022234555568888 999997653
Q ss_pred ---CCCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEE
Q 023390 222 ---CNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHF 273 (283)
Q Consensus 222 ---~~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F 273 (283)
..||. |+. ++|+|++|.|...+.+.-++++ +|++.++.+
T Consensus 371 ~~~nTDGI-Di~---~NV~I~nc~I~~gDDcIaIks~---------NI~I~nc~i 412 (574)
T 1ogo_X 371 FFFQTDGP-EIY---PNSVVHDVFWHVNDDAIKIYYS---------GASVSRATI 412 (574)
T ss_dssp CSTTCCCC-BCC---TTCEEEEEEEEESSCSEECCST---------TCEEEEEEE
T ss_pred CCCCCccC-ccc---CCEEEEeeEEECCCCEEEECCc---------cEEEEeEEE
Confidence 37884 764 9999999999998888888862 567766664
No 40
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=97.22 E-value=0.0029 Score=62.70 Aligned_cols=121 Identities=21% Similarity=0.259 Sum_probs=71.2
Q ss_pred hHHHhhhcCCC-eEEEEeeeeEEEeCceEEe------cCCcEEEeeC-CceEEeCCCeEEEEeeccEEEEeeEEEecccC
Q 023390 110 TLRYAVIQDEP-LWIIFARDMVITLKEELIM------NSFKTIDGRG-ASVHIAGGPCITVQYVTNIIIHGINIHDCKRG 181 (283)
Q Consensus 110 tLr~av~~~~P-~~IvF~~~g~I~L~~~L~i------~snkTI~G~g-a~~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~ 181 (283)
+|++|+.+-.| -+|++. .|+.+ ...|.+ ...+||.|.+ ..+.|.++..|+| .+++|.|++|+|++...
T Consensus 33 ~Lq~Ai~~A~pGDtI~L~-~GtY~-~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~~~l~i-~g~~v~i~GL~i~~~~~- 108 (506)
T 1dbg_A 33 TLYQVVKEVKPGGLVQIA-DGTYK-DVQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVEL-RGEHLILEGIWFKDGNR- 108 (506)
T ss_dssp HHHHHHHHCCTTCEEEEC-SEEEE-TCEEEECCCCBTTBCEEEEESSTTSEEEEESCEEEE-CSSSEEEESCEEEEECC-
T ss_pred HHHHHHHhCCCCCEEEEC-CCEEe-cceEEEecCCcCCCCEEEECCCCCccEEeCCceEEE-EcCCEEEECeEEECCCc-
Confidence 59999975433 344443 35554 225666 5678999974 3466775556888 57999999999998431
Q ss_pred CCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCc-eecc-------cCCceEEEEcceecc
Q 023390 182 GNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGL-IDAI-------HGSTAITISNNYMTH 245 (283)
Q Consensus 182 g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~Dgl-iDv~-------~gs~~ITISnn~f~~ 245 (283)
.. +..+ ..+..++.+. ++++-|.+|.|....++. +.+. ..+.+.+|.+|.|.+
T Consensus 109 --~~-------~~~~-~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~G 169 (506)
T 1dbg_A 109 --AI-------QAWK-SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTD 169 (506)
T ss_dssp --CT-------TTCC-TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEEC
T ss_pred --ce-------eeee-cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEEC
Confidence 00 0000 0123455555 366667777777766551 1111 124455677777764
No 41
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.20 E-value=0.0038 Score=58.33 Aligned_cols=99 Identities=20% Similarity=0.282 Sum_probs=66.9
Q ss_pred hHHHhhhc-----CCCeEEEEeeeeEEEeCceEEe---cCCcEEEeeCCc-eEEeC------------CCeEEEEeeccE
Q 023390 110 TLRYAVIQ-----DEPLWIIFARDMVITLKEELIM---NSFKTIDGRGAS-VHIAG------------GPCITVQYVTNI 168 (283)
Q Consensus 110 tLr~av~~-----~~P~~IvF~~~g~I~L~~~L~i---~snkTI~G~ga~-~~I~~------------G~~i~i~~a~NV 168 (283)
|+.+||.+ +++.+|.++ .|+- ++.|.| ++|+||.|.|.. ..|.+ .+.+.+ .++++
T Consensus 17 TIq~AI~aap~~~~~~~~I~I~-~G~Y--~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f 92 (317)
T 1xg2_A 17 TLAEAVAAAPDKSKTRYVIYVK-RGTY--KENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAA-VGQGF 92 (317)
T ss_dssp SHHHHHHHSCSSCSSCEEEEEC-SEEE--ECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSEEE-CSTTC
T ss_pred cHHHHHhhcccCCCceEEEEEc-CCEE--eeeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEEEE-ECCCE
Confidence 68888864 233355544 4544 467888 478999999854 44542 235777 69999
Q ss_pred EEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCcee
Q 023390 169 IIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLID 228 (283)
Q Consensus 169 IIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliD 228 (283)
+++||+|++.. ++ .....-||.+ .+.++.+.+|.|....|.|.+
T Consensus 93 ~~~~lt~~Nt~--g~-------------~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~ 136 (317)
T 1xg2_A 93 ILQDICIQNTA--GP-------------AKDQAVALRV-GADMSVINRCRIDAYQDTLYA 136 (317)
T ss_dssp EEESCEEEECC--CG-------------GGCCCCSEEE-CCTTEEEESCEEECSTTCEEE
T ss_pred EEEEeEEeccc--CC-------------ccCceEEEEE-eCCcEEEEEeEeCccccceee
Confidence 99999999842 11 0123356666 578888999999988887655
No 42
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.14 E-value=0.0074 Score=56.44 Aligned_cols=99 Identities=15% Similarity=0.195 Sum_probs=67.0
Q ss_pred hHHHhhhc----C-CCeEEEEeeeeEEEeCceEEe---cCCcEEEeeCCc-eEEeC------------CCeEEEEeeccE
Q 023390 110 TLRYAVIQ----D-EPLWIIFARDMVITLKEELIM---NSFKTIDGRGAS-VHIAG------------GPCITVQYVTNI 168 (283)
Q Consensus 110 tLr~av~~----~-~P~~IvF~~~g~I~L~~~L~i---~snkTI~G~ga~-~~I~~------------G~~i~i~~a~NV 168 (283)
|+.+||.+ + ++.+|.++ .|+- ++.|.| ++|+||.|.|.. ..|.+ ++.+.+ .++++
T Consensus 21 TIq~AI~aap~~~~~~~~I~I~-~G~Y--~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f 96 (319)
T 1gq8_A 21 TVSEAVAAAPEDSKTRYVIRIK-AGVY--RENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAA-VGAGF 96 (319)
T ss_dssp SHHHHHHHSCSSCSSCEEEEEC-SEEE--ECCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEE-CSTTC
T ss_pred CHHHHHHhccccCCceEEEEEc-CCeE--eeeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEEEE-ECCCE
Confidence 68888864 2 23345444 4544 467888 478999999854 44542 135777 59999
Q ss_pred EEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCcee
Q 023390 169 IIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLID 228 (283)
Q Consensus 169 IIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliD 228 (283)
+++||+|++.. ++ .....-||.+ .+.++-+.+|.|....|.|.+
T Consensus 97 ~~~nlt~~Nt~--g~-------------~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~ 140 (319)
T 1gq8_A 97 LARDITFQNTA--GA-------------AKHQAVALRV-GSDLSAFYRCDILAYQDSLYV 140 (319)
T ss_dssp EEEEEEEEECC--CG-------------GGCCCCSEEE-CCTTEEEEEEEEECSTTCEEE
T ss_pred EEEEeEeEccC--CC-------------cCCceEEEEe-cCCcEEEEEeEECccceeeee
Confidence 99999999842 11 0123456666 578889999999998887765
No 43
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=97.13 E-value=0.0039 Score=62.31 Aligned_cols=101 Identities=11% Similarity=0.097 Sum_probs=69.5
Q ss_pred EeeccEEEEeeEEEecccCC------C--c---eeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceeccc
Q 023390 163 QYVTNIIIHGINIHDCKRGG------N--A---NVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 231 (283)
Q Consensus 163 ~~a~NVIIrnL~i~~~~~~g------~--~---~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~ 231 (283)
.+++||.|++|++++...|. . . .|+.- ..-.......|||.+. +||-|.+|.|....| .|.++
T Consensus 290 ~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~--~i~~~~~~NTDGidi~--~nV~I~n~~i~~gDD-cIaIk- 363 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDY--KQVGAFYGQTDGLEMY--PGTILQDVFYHTDDD-GLKMY- 363 (549)
T ss_dssp SSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEE--EEECCCBTTCCCCBCC--TTCEEEEEEEEESSC-CEECC-
T ss_pred CCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEee--EeEcCCCCCCCccccc--CCEEEEeeEEeCCCC-EEEEC-
Confidence 78899999999999853221 1 1 11100 0000001247999998 999999999999988 44654
Q ss_pred CCceEEEEcceec-ccCeE-EEeecCCCcCCCCceeEEEEceEEc
Q 023390 232 GSTAITISNNYMT-HHNKV-MLLGHSDTFTQDKNMQVTIAFNHFG 274 (283)
Q Consensus 232 gs~~ITISnn~f~-~H~k~-~LiG~sd~~~~D~~~~VTih~N~F~ 274 (283)
+.+|+|+||.+. .|..+ +-+|++ .+...+|+|.++.+.
T Consensus 364 -s~NI~I~n~~~~~~~g~~~IsiGs~----~~~V~NV~v~n~~i~ 403 (549)
T 1x0c_A 364 -YSNVTARNIVMWKESVAPVVEFGWT----PRNTENVLFDNVDVI 403 (549)
T ss_dssp -SSSEEEEEEEEEECSSSCSEECCBS----CCCEEEEEEEEEEEE
T ss_pred -CCCEEEEeeEEEcCCCCceEEECCC----CCcEEEEEEEeeEEE
Confidence 399999999997 46655 778884 234568999888884
No 44
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.06 E-value=0.0069 Score=61.03 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=66.0
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEee-----------CCceEEEeeeeeecCCCC
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIF-----------GGSHVWVDHCSLSNCNDG 225 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~-----------gs~nVWIDHcs~s~~~Dg 225 (283)
+-||.+..++||.|+|.+|.. ..|+|.|. .++||+|.+|.+..+.++
T Consensus 380 tDGidi~~s~nV~I~n~~i~~----------------------gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~ 437 (608)
T 2uvf_A 380 GDGIEFGNSQNVMVFNNFFDT----------------------GDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGA 437 (608)
T ss_dssp CCSEEEESCEEEEEESCEEEC----------------------SSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCS
T ss_pred CCeEEecCCceEEEEeeEEec----------------------CCceEEecCCcCccccccccccCEEEEeEEEeCCCCe
Confidence 346899899999999999983 24555554 369999999999987655
Q ss_pred ce-e--cccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEE
Q 023390 226 LI-D--AIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHF 273 (283)
Q Consensus 226 li-D--v~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F 273 (283)
.. - ...+..+|+|+||.|.+...++-|.+..... ....+|+|.++.+
T Consensus 438 ~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~g-G~v~nI~~~ni~m 487 (608)
T 2uvf_A 438 IVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTIG-GGARNVTFRNNAM 487 (608)
T ss_dssp EEEESCCTTCEEEEEEESCEEESCSEEEEEEEETTTC-CEEEEEEEEEEEE
T ss_pred EEEcccCCCCEEEEEEEeEEEECCCceEEEeeecCCC-ceEECcEEEeeEE
Confidence 32 1 0123479999999999998888886532111 1135667666665
No 45
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.03 E-value=0.0063 Score=57.41 Aligned_cols=112 Identities=19% Similarity=0.253 Sum_probs=66.4
Q ss_pred hHHHhhhc----CCCeEEEEeeeeEEEeCceEEe-cCCcEEEeeCCc-eEEeC------------------CCeEEEEee
Q 023390 110 TLRYAVIQ----DEPLWIIFARDMVITLKEELIM-NSFKTIDGRGAS-VHIAG------------------GPCITVQYV 165 (283)
Q Consensus 110 tLr~av~~----~~P~~IvF~~~g~I~L~~~L~i-~snkTI~G~ga~-~~I~~------------------G~~i~i~~a 165 (283)
|+.+||.+ +++.+|.+. .|+- ++.|.| .+|+||.|.|.. ..|.+ .+.+.+ .+
T Consensus 20 TIq~Ai~aap~~~~~~~I~I~-~G~Y--~E~V~I~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~~satv~v-~a 95 (342)
T 2nsp_A 20 TIADAIASAPAGSTPFVILIK-NGVY--NERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITI-SA 95 (342)
T ss_dssp SHHHHHHTSCSSSSCEEEEEC-SEEE--ECCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEE-CS
T ss_pred hHHHHHHhcccCCCcEEEEEe-CCEE--EEEEEEecCeEEEEecCCCCeEEEecccccccccccCcccccceeEEEE-EC
Confidence 68888864 233344444 4544 466777 578999999854 44531 134667 58
Q ss_pred ccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEe--e-CCceEEEeeeeeecCCCCcee
Q 023390 166 TNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSI--F-GGSHVWVDHCSLSNCNDGLID 228 (283)
Q Consensus 166 ~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I--~-gs~nVWIDHcs~s~~~DgliD 228 (283)
++++++||+|++..+. ........-+........++.+ . .+.++.+.+|.|....|.|.+
T Consensus 96 ~~f~a~nlt~~Nt~~~---~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~ 158 (342)
T 2nsp_A 96 KDFSAQSLTIRNDFDF---PANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYV 158 (342)
T ss_dssp BSCEEEEEEEEECCCH---HHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEE
T ss_pred CCEEEEeeEEEccccc---cccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEE
Confidence 9999999999985410 0000000000000012333444 3 578999999999998887765
No 46
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=96.93 E-value=0.012 Score=56.17 Aligned_cols=126 Identities=15% Similarity=0.204 Sum_probs=73.3
Q ss_pred hHHHhhhc----CCCeEEEEeeeeEEEeCceEEe-cCCcEEEeeCCc-eEEeCC------------------CeEEEEee
Q 023390 110 TLRYAVIQ----DEPLWIIFARDMVITLKEELIM-NSFKTIDGRGAS-VHIAGG------------------PCITVQYV 165 (283)
Q Consensus 110 tLr~av~~----~~P~~IvF~~~g~I~L~~~L~i-~snkTI~G~ga~-~~I~~G------------------~~i~i~~a 165 (283)
|+.+||.+ +++.+|.+. .|+ .++.|.| .+++||.|.|.. ..|.++ +.+.+ .+
T Consensus 46 TIq~Ai~aa~~~~~~~~I~I~-~G~--Y~E~v~I~k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~saTv~V-~a 121 (364)
T 3uw0_A 46 SINAALKSAPKDDTPFIIFLK-NGV--YTERLEVARSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSGSSTVLV-NA 121 (364)
T ss_dssp CHHHHHHHSCSSSSCEEEEEC-SEE--ECCCEEECSTTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTTCCSEEE-CS
T ss_pred cHHHHHhhcccCCCcEEEEEe-CCE--EEEEEEEcCCeEEEEecCCCCeEEEccccccccccccccccccCeeEEEE-EC
Confidence 47777753 344455554 343 3456777 467999999863 444421 44566 68
Q ss_pred ccEEEEeeEEEecccCC--CceeecCCCccccCcCCCCCeEEee-CCceEEEeeeeeecCCCCceecccCCceEEEEcce
Q 023390 166 TNIIIHGINIHDCKRGG--NANVRDSPSHYGWRTISDGDGVSIF-GGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNY 242 (283)
Q Consensus 166 ~NVIIrnL~i~~~~~~g--~~~ir~~~~~~g~r~~~~~DaI~I~-gs~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~ 242 (283)
+|++++||+|++..... ...-...|... .....=||.+. .+.++.+.+|.|....|.|.+- .+...-+.+|+
T Consensus 122 ~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~---~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~--~~gr~yf~~c~ 196 (364)
T 3uw0_A 122 PNFTAENLTIRNDFDFPANKKKADTDPTKL---KDTQAVALLLAENSDKARFKAVKLEGYQDTLYSK--TGSRSYFSDCE 196 (364)
T ss_dssp TTCEEEEEEEEECCCHHHHHHSCTTCTTCC---SCCCCCSEEECTTCEEEEEEEEEEECSBSCEEEC--TTCEEEEESCE
T ss_pred CCEEEEeeeeEcCCcccccccccccccccc---cCCccEEEEEecCCCeEEEEeeEEEecccceEeC--CCCCEEEEcCE
Confidence 99999999999853200 00000000000 01223466665 5899999999999999888762 13344444444
Q ss_pred ec
Q 023390 243 MT 244 (283)
Q Consensus 243 f~ 244 (283)
+.
T Consensus 197 I~ 198 (364)
T 3uw0_A 197 IS 198 (364)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 47
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.49 E-value=0.035 Score=52.39 Aligned_cols=66 Identities=23% Similarity=0.337 Sum_probs=47.5
Q ss_pred CCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeE-Ee-eCCceEEEeeeeeecCCCCceecc---
Q 023390 156 GGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGV-SI-FGGSHVWVDHCSLSNCNDGLIDAI--- 230 (283)
Q Consensus 156 ~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI-~I-~gs~nVWIDHcs~s~~~DgliDv~--- 230 (283)
+|-+|.+.+++||+|.|..|.. ..|++ .+ .++++|=|-+|.|+....+++--.
T Consensus 149 ~~DaI~i~~s~nVwIDHcs~s~----------------------~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~ 206 (346)
T 1pxz_A 149 DGDAITMRNVTNAWIDHNSLSD----------------------CSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDT 206 (346)
T ss_dssp CCCSEEEESCEEEEEESCEEEC----------------------CSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSS
T ss_pred CCCEEEEecCceEEEEeeEEec----------------------CCCCcEeeccCcceEEEEeeEEecCCceeEECCCCc
Confidence 3557899999999999999984 24565 55 478888888888887544443311
Q ss_pred ---cCCceEEEEccee
Q 023390 231 ---HGSTAITISNNYM 243 (283)
Q Consensus 231 ---~gs~~ITISnn~f 243 (283)
.....||+.+|+|
T Consensus 207 ~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 207 YDDDKSMKVTVAFNQF 222 (346)
T ss_dssp CGGGGGCEEEEESCEE
T ss_pred cccCCceEEEEEeeEE
Confidence 1124899999999
No 48
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=96.48 E-value=0.019 Score=57.40 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=40.2
Q ss_pred ce--EEEeeeeeec----CCCCceecccCCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEE
Q 023390 210 SH--VWVDHCSLSN----CNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHF 273 (283)
Q Consensus 210 ~n--VWIDHcs~s~----~~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F 273 (283)
++ |-||++.... ..||. |+. ++|+|+||.|...+.+.-+++ .+|++.++.+
T Consensus 318 ~ni~V~I~n~~i~~~~~~NTDGi-di~---~nV~I~n~~i~~gDDcIaIks---------~NI~I~n~~~ 374 (549)
T 1x0c_A 318 DLITCRVDDYKQVGAFYGQTDGL-EMY---PGTILQDVFYHTDDDGLKMYY---------SNVTARNIVM 374 (549)
T ss_dssp GGEEEEEEEEEEECCCBTTCCCC-BCC---TTCEEEEEEEEESSCCEECCS---------SSEEEEEEEE
T ss_pred CCCeEEEEeeEeEcCCCCCCCcc-ccc---CCEEEEeeEEeCCCCEEEECC---------CCEEEEeeEE
Confidence 47 8888888643 47774 754 999999999999888888876 2688888887
No 49
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=96.46 E-value=0.0059 Score=59.13 Aligned_cols=111 Identities=16% Similarity=0.236 Sum_probs=77.8
Q ss_pred EEEEeeeeEEEeCceEEe-cCCcEEEeeCCceE---Ee------C-------CCeEEEEee-----------------cc
Q 023390 122 WIIFARDMVITLKEELIM-NSFKTIDGRGASVH---IA------G-------GPCITVQYV-----------------TN 167 (283)
Q Consensus 122 ~IvF~~~g~I~L~~~L~i-~snkTI~G~ga~~~---I~------~-------G~~i~i~~a-----------------~N 167 (283)
+|++. .|..+|+.++.| .|++||.|.+.++. |. + |..|++..+ ++
T Consensus 59 vI~L~-~G~Y~l~g~ivIdkp~LtL~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~ 137 (410)
T 2inu_A 59 AIIIP-PGDYDLHTQVVVDVSYLTIAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSG 137 (410)
T ss_dssp EEECC-SEEEEECSCEEECCTTEEEECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEEC
T ss_pred EEEEC-CCeeccCCcEEEecCcEEEEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCC
Confidence 44444 478888889999 56699999874432 33 1 233444443 89
Q ss_pred EEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeC-CceEEEeeeeeecCCCCceecccCCceEEEEcceecc
Q 023390 168 IIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFG-GSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTH 245 (283)
Q Consensus 168 VIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~g-s~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~f~~ 245 (283)
|.|+++.|+++.- ++ .|.......-||.+.. +.++.|.+|.|....-|+ . .+++++++|.+|.+.+
T Consensus 138 V~~~~v~I~G~~~------~~----~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI-~-l~~a~~~~I~~N~I~e 204 (410)
T 2inu_A 138 IVFRDFCLDGVGF------TP----GKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHAL-I-VRGADALRVNDNMIAE 204 (410)
T ss_dssp CEEESCEEECCCC------SS----STTSCCCSCEEEEECSCEESCEEESCEEESCSEEE-E-ETTEESCEEESCEEES
T ss_pred cEECCEEEECCEe------ec----CCCCcccCceeEEEeccCCeEEEECCEEecccEEE-E-EccCCCcEEECCEEEe
Confidence 9999999987521 10 1222235667888875 788899999999988887 4 3689999999999983
No 50
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=96.04 E-value=0.065 Score=50.80 Aligned_cols=67 Identities=21% Similarity=0.415 Sum_probs=47.6
Q ss_pred CCeEEee-CCceEEEeeeeeecCC-------CCceecccCCceEEEEcceecccCeEEE-eecCCCcCCCCceeEEEEce
Q 023390 201 GDGVSIF-GGSHVWVDHCSLSNCN-------DGLIDAIHGSTAITISNNYMTHHNKVML-LGHSDTFTQDKNMQVTIAFN 271 (283)
Q Consensus 201 ~DaI~I~-gs~nVWIDHcs~s~~~-------DgliDv~~gs~~ITISnn~f~~H~k~~L-iG~sd~~~~D~~~~VTih~N 271 (283)
+.+|.|. +++||+|-+..|.... |++ .+ .++++|-|-+|.|+.-...++ .|.. ..-.||+.+|
T Consensus 123 G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI-~i-~~s~nvwIDHcs~s~~~d~~~~~~~~------~s~~vTISnn 194 (359)
T 1qcx_A 123 GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAI-TV-DDSDLVWIDHVTTARIGRQHIVLGTS------ADNRVTISYS 194 (359)
T ss_dssp SCCEEEETTCCCEEEESCEEEEECTTEETSCCSE-EE-ESCCCEEEESCEEEEESSCSEEECSS------CCEEEEEESC
T ss_pred cceEEEecCCCCEEEeCcEEEecCCcccccCcee-Ee-cCCceEEEEeeEeeccCcCceeeccc------ccccEEEECc
Confidence 4579998 8999999999998643 443 33 468888888888885433333 2211 2348999999
Q ss_pred EEcC
Q 023390 272 HFGE 275 (283)
Q Consensus 272 ~F~~ 275 (283)
+|.+
T Consensus 195 ~f~~ 198 (359)
T 1qcx_A 195 LIDG 198 (359)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9963
No 51
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=95.80 E-value=0.23 Score=46.86 Aligned_cols=68 Identities=19% Similarity=0.183 Sum_probs=48.8
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCe-EEee-CCceEEEeeeeeecCCCCceeccc---
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDG-VSIF-GGSHVWVDHCSLSNCNDGLIDAIH--- 231 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~Da-I~I~-gs~nVWIDHcs~s~~~DgliDv~~--- 231 (283)
+-+|.+.+++||+|.|..|..+ .|+ |.+. ++++|=|-+|-|....-.++--..
T Consensus 116 ~DaI~i~~s~nVWIDHcs~s~~----------------------~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~ 173 (340)
T 3zsc_A 116 FDYINVENSHHIWIDHITFVNG----------------------NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKE 173 (340)
T ss_dssp CCSEEEESCEEEEEESCEEESC----------------------SSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTS
T ss_pred CCeEEEecCCcEEEEeeeeccC----------------------CccceEEecCCceEEEECcEeccCceeeEeCcCCCC
Confidence 4568899999999999999842 243 5665 578888888888876544432111
Q ss_pred ------CCceEEEEcceeccc
Q 023390 232 ------GSTAITISNNYMTHH 246 (283)
Q Consensus 232 ------gs~~ITISnn~f~~H 246 (283)
+...||+-+|+|.++
T Consensus 174 ~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 174 DPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp CHHHHHHSCEEEEESCEEESC
T ss_pred ccccccCCcEEEEECeEecCC
Confidence 124899999999854
No 52
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=95.72 E-value=0.091 Score=51.45 Aligned_cols=87 Identities=17% Similarity=0.154 Sum_probs=60.9
Q ss_pred EEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCe-EEeeCCceEEEeeeeeecCCCCceeccc-------
Q 023390 160 ITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDG-VSIFGGSHVWVDHCSLSNCNDGLIDAIH------- 231 (283)
Q Consensus 160 i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~Da-I~I~gs~nVWIDHcs~s~~~DgliDv~~------- 231 (283)
+.+ .++||.|+|++|... .+++| +...+++||.|.+|.|.. ..|+ .++.
T Consensus 170 i~i-~s~nV~I~n~~I~~g--------------------ddgiGs~~~~~~~NV~V~n~~~~g-g~GI-rIktg~d~IG~ 226 (464)
T 1h80_A 170 RLH-WSRNGIIERIKQNNA--------------------LFGYGLIQTYGADNILFRNLHSEG-GIAL-RMETDNLLMKN 226 (464)
T ss_dssp EEE-EEEEEEEEEEEEESC--------------------CTTCEEEEESEEEEEEEEEEEEES-SEEE-EEECCCHHHHH
T ss_pred cee-eccCEEEeceEEecC--------------------CCeEEecccCCEeEEEEEeeEEEC-CCEE-EEEeCCceecc
Confidence 455 799999999999841 24566 556689999999999887 3332 2222
Q ss_pred ----CCceEEEEcceecccCeEEEeecCCCcCCCCceeEEEEceEE
Q 023390 232 ----GSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHF 273 (283)
Q Consensus 232 ----gs~~ITISnn~f~~H~k~~LiG~sd~~~~D~~~~VTih~N~F 273 (283)
...+|+++||.|.+-...+.++.+.. ...+|||.+-..
T Consensus 227 ~~~g~v~NI~~~Ni~~~nv~~~I~I~p~~~----~isnItfeNI~~ 268 (464)
T 1h80_A 227 YKQGGIRNIFADNIRCSKGLAAVMFGPHFM----KNGDVQVTNVSS 268 (464)
T ss_dssp HTCCEEEEEEEEEEEEESSSEEEEEECTTC----BCCCEEEEEEEE
T ss_pred CCCCcEEEEEEEeEEEECCceeEEEeCCCc----eEeEEEEEEEEE
Confidence 36799999999999888888884321 123566655444
No 53
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=95.07 E-value=0.13 Score=47.48 Aligned_cols=86 Identities=14% Similarity=0.072 Sum_probs=51.3
Q ss_pred CeEEEEe-eccEEEEeeEEEecccCCCceeec-CC-Ccc-cc-CcCCCCCeEEeeC-CceEEEeeeeeecCCCCceec--
Q 023390 158 PCITVQY-VTNIIIHGINIHDCKRGGNANVRD-SP-SHY-GW-RTISDGDGVSIFG-GSHVWVDHCSLSNCNDGLIDA-- 229 (283)
Q Consensus 158 ~~i~i~~-a~NVIIrnL~i~~~~~~g~~~ir~-~~-~~~-g~-r~~~~~DaI~I~g-s~nVWIDHcs~s~~~DgliDv-- 229 (283)
.+|.+.. ..|++++|..+++. ...++... +. ..+ +. ......|||.+.. +++++|.+|.+....|+.+-+
T Consensus 149 ~gi~~~~~~~~~~i~n~~~~~~--~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~ 226 (377)
T 2pyg_A 149 YGFDPHEQTINLTIRDSVAHDN--GLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQR 226 (377)
T ss_dssp CSEEECSSEEEEEEESCEEESC--SSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSCSEEEEC
T ss_pred ceEEeecccCCeEEEeEEeecC--CCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCceEEEec
Confidence 3455544 34788888888542 22222100 00 000 00 0012469999776 999999999999887776542
Q ss_pred ----ccCCceEEEEcceecc
Q 023390 230 ----IHGSTAITISNNYMTH 245 (283)
Q Consensus 230 ----~~gs~~ITISnn~f~~ 245 (283)
...+.+++|++|.+.+
T Consensus 227 g~~~~~~s~nv~i~~N~~~~ 246 (377)
T 2pyg_A 227 GLEDLALPSNILIDGGAYYD 246 (377)
T ss_dssp CSSCCCCCEEEEEESCEEES
T ss_pred cccCCCCCccEEEECCEEEc
Confidence 1567778888887764
No 54
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=94.66 E-value=0.36 Score=45.70 Aligned_cols=84 Identities=13% Similarity=0.181 Sum_probs=48.2
Q ss_pred CcEEEeeCCceEEeCCCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeec
Q 023390 142 FKTIDGRGASVHIAGGPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSN 221 (283)
Q Consensus 142 nkTI~G~ga~~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~ 221 (283)
|++|-.-.+. ...++-+|.+.+++||+|.|..|..+. .+++. +...++++|=|-+|-|..
T Consensus 139 nL~i~~~~~~-~~~g~DaI~i~~s~nVwIDHcs~s~~~---d~~~~----------------~g~~~s~~VTISnn~f~~ 198 (359)
T 1idk_A 139 NIAVTDINPK-YVWGGDAITLDDCDLVWIDHVTTARIG---RQHYV----------------LGTSADNRVSLTNNYIDG 198 (359)
T ss_dssp SCEEEEECTT-EETSCCSEEECSCEEEEEESCEEEEES---SCSEE----------------ECCCTTCEEEEESCEEEC
T ss_pred CeEEEccccc-ccccCCceeecCCCcEEEEeeEeecCC---CCcEE----------------ecccCcceEEEECcEecC
Confidence 5555542211 122344688889999999999998531 11100 013356666666666664
Q ss_pred CC------C-----CceecccCCceEEEEcceeccc
Q 023390 222 CN------D-----GLIDAIHGSTAITISNNYMTHH 246 (283)
Q Consensus 222 ~~------D-----gliDv~~gs~~ITISnn~f~~H 246 (283)
.. + +.+ +...++.||+-+|+|.++
T Consensus 199 ~~~~s~~~~G~h~~~~~-L~G~sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 199 VSDYSATCDGYHYWAIY-LDGDADLVTMKGNYIYHT 233 (359)
T ss_dssp BCSCBTTSSSBBSCCEE-ECCSSCEEEEESCEEESB
T ss_pred CcccccccCccccceEE-EEecCCCeEEEceEeecC
Confidence 32 1 221 223367899999988854
No 55
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=93.73 E-value=0.34 Score=47.89 Aligned_cols=20 Identities=5% Similarity=-0.097 Sum_probs=15.3
Q ss_pred eEEEEeeccEEEEeeEEEecc
Q 023390 159 CITVQYVTNIIIHGINIHDCK 179 (283)
Q Consensus 159 ~i~i~~a~NVIIrnL~i~~~~ 179 (283)
++.+. ++++.|+|.+|++..
T Consensus 120 ~iav~-G~~~~I~nn~I~~~~ 139 (506)
T 1dbg_A 120 LVAIY-GSYNRITACVFDCFD 139 (506)
T ss_dssp SEEEC-SSSCEEESCEEESCC
T ss_pred ceEEe-cCCeEEEeeEEEcCC
Confidence 35564 589999999999753
No 56
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=93.52 E-value=0.21 Score=48.29 Aligned_cols=88 Identities=17% Similarity=0.161 Sum_probs=54.8
Q ss_pred CeEEEEeeccEEEEeeEEEec----ccCC--Cc-eeecCCCccccCcCCCCCeEEeeCCceEEEeeeeee-cCCCCceec
Q 023390 158 PCITVQYVTNIIIHGINIHDC----KRGG--NA-NVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLS-NCNDGLIDA 229 (283)
Q Consensus 158 ~~i~i~~a~NVIIrnL~i~~~----~~~g--~~-~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s-~~~DgliDv 229 (283)
.||.++++++..|++-.|.++ .-+| .. .|++. .+ +...+|++|.++.+++.-|.++.+. ...||+.-
T Consensus 185 fGI~l~~a~~~~I~~N~I~e~GNgI~L~G~~~~~~I~~N--~i--~~~~dG~gIyl~ns~~~~I~~N~i~~~~R~gIh~- 259 (410)
T 2inu_A 185 HALIVRGADALRVNDNMIAECGNCVELTGAGQATIVSGN--HM--GAGPDGVTLLAENHEGLLVTGNNLFPRGRSLIEF- 259 (410)
T ss_dssp EEEEETTEESCEEESCEEESSSEEEEECSCEESCEEESC--EE--ECCTTSEEEEEESEESCEEESCEECSCSSEEEEE-
T ss_pred EEEEEccCCCcEEECCEEEecCCceeeccccccceEecc--ee--eecCCCCEEEEEeCCCCEEECCCcccCcceEEEE-
Confidence 456677777777777777731 0111 11 11111 11 1234667799999999999999774 47777743
Q ss_pred ccCCceEEEEcceecccCeEEE
Q 023390 230 IHGSTAITISNNYMTHHNKVML 251 (283)
Q Consensus 230 ~~gs~~ITISnn~f~~H~k~~L 251 (283)
+.|++.+|++|.|.+...+|.
T Consensus 260 -m~s~~~~i~~N~f~~~~~Gi~ 280 (410)
T 2inu_A 260 -TGCNRCSVTSNRLQGFYPGML 280 (410)
T ss_dssp -ESCBSCEEESCEEEESSSCSE
T ss_pred -EccCCCEEECCEEecceeEEE
Confidence 567888888888886555443
No 57
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=92.86 E-value=0.78 Score=43.84 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=60.8
Q ss_pred cCCcEEEeeCCceEEeCCCeEEEEeeccEEEEeeEEEecccCC--------CceeecCCCccccCc----CCCCCeEEee
Q 023390 140 NSFKTIDGRGASVHIAGGPCITVQYVTNIIIHGINIHDCKRGG--------NANVRDSPSHYGWRT----ISDGDGVSIF 207 (283)
Q Consensus 140 ~snkTI~G~ga~~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g--------~~~ir~~~~~~g~r~----~~~~DaI~I~ 207 (283)
.++.+|.|..-. =.+..+|.+.. ++++|+|++|++....| ...|... .-++... ...+|||.+.
T Consensus 114 ~~~~~i~gl~I~--n~g~~GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn-~i~~N~d~~~~g~~~dG~~~~ 189 (400)
T 1ru4_A 114 GDYWYFKGVEVT--RAGYQGAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINS-DAYRNYDPKKNGSMADGFGPK 189 (400)
T ss_dssp SSCEEEESEEEE--SCSSCSEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESC-EEECCCCTTTTTSSCCSEEEC
T ss_pred CCeEEEEeEEEE--eCCCCcEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEce-EEEcccCccccCcccceEEEE
Confidence 455666554210 01122577765 77788999998754311 0112211 1112111 1356888876
Q ss_pred C--CceEEEeeeeeecCCCCceecccCCceEEEEcceeccc
Q 023390 208 G--GSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHH 246 (283)
Q Consensus 208 g--s~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~f~~H 246 (283)
. +.+..|.+|.+.+-.|.-+|+......|||.+|...+.
T Consensus 190 ~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 190 QKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRN 230 (400)
T ss_dssp TTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEEST
T ss_pred ecccCCeEEECCEEeecCCCcEEEEecCCCEEEEeEEEECC
Confidence 4 37788889998877666668776667799999987643
No 58
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=92.81 E-value=0.15 Score=51.54 Aligned_cols=45 Identities=16% Similarity=0.167 Sum_probs=25.8
Q ss_pred CCCeEEeeCCceEEEeeeeeecCCCCceec-ccCCc-eEEEEcceecccCeEEEeec
Q 023390 200 DGDGVSIFGGSHVWVDHCSLSNCNDGLIDA-IHGST-AITISNNYMTHHNKVMLLGH 254 (283)
Q Consensus 200 ~~DaI~I~gs~nVWIDHcs~s~~~DgliDv-~~gs~-~ITISnn~f~~H~k~~LiG~ 254 (283)
+.||| |+|.+|.++.+.|. |.+ +.++. +++++ .+..-..++-+|+
T Consensus 228 NTDGI-------V~I~nc~I~tGDDC-IAI~KSGs~~ni~~e--~~~~GHgGISIGS 274 (600)
T 2x6w_A 228 NADHS-------TVYVNCPYSGVESC-YFSMSSSFARNIACS--VQLHQHDTFYRGS 274 (600)
T ss_dssp CCCEE-------EEEECSSSEEEESC-EEECCCTTHHHHEEE--EEECSSSEEEESC
T ss_pred CCCEE-------EEEEeeEEecCCcE-EEEecCCCcCCeEEE--EEcCCCCcEEecc
Confidence 56777 88888888866444 466 65553 35555 2222113555565
No 59
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=92.77 E-value=0.95 Score=42.33 Aligned_cols=76 Identities=18% Similarity=0.148 Sum_probs=48.0
Q ss_pred CCeEEEEe-eccEEEEeeEEEecccCCCceeecCCCccccCcCCCCC-eEEee-CCceEEEeeeeeecCCCCceecccC-
Q 023390 157 GPCITVQY-VTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGD-GVSIF-GGSHVWVDHCSLSNCNDGLIDAIHG- 232 (283)
Q Consensus 157 G~~i~i~~-a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~D-aI~I~-gs~nVWIDHcs~s~~~DgliDv~~g- 232 (283)
+-+|.+.. ++||+|.|..|....++. ....-.| .+.+. ++.+|=|-+|-|....-+++--...
T Consensus 120 ~DaI~i~~~s~nVWIDH~s~s~~~~g~-------------~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~ 186 (326)
T 3vmv_A 120 GTAIEVTDDSKNVWIDHNEFYSEFPGN-------------GDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDN 186 (326)
T ss_dssp SCSEEEETTCEEEEEESCEEECCSSTT-------------SCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSC
T ss_pred CCeEEEecCCCcEEEEeeEEeccccCC-------------cCccccCcceEecCCCceEEEEceEEecCceEEEECCCCC
Confidence 44688886 899999999998543210 0111234 34554 5778888888887654444331111
Q ss_pred ----CceEEEEcceecc
Q 023390 233 ----STAITISNNYMTH 245 (283)
Q Consensus 233 ----s~~ITISnn~f~~ 245 (283)
-..||+-+|+|.+
T Consensus 187 ~~~~~~~vT~~~N~f~~ 203 (326)
T 3vmv_A 187 ASLAPDKITYHHNYFNN 203 (326)
T ss_dssp GGGCCEEEEEESCEEEE
T ss_pred CcccCccEEEEeeEecC
Confidence 2379999999984
No 60
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=92.54 E-value=0.67 Score=45.62 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=30.4
Q ss_pred hHHHhhh----cCCCeEEEEeeee----EEEeCceEEecCCcEEEeeCCc
Q 023390 110 TLRYAVI----QDEPLWIIFARDM----VITLKEELIMNSFKTIDGRGAS 151 (283)
Q Consensus 110 tLr~av~----~~~P~~IvF~~~g----~I~L~~~L~i~snkTI~G~ga~ 151 (283)
.++.|+. ++++.+|+|-. | +..++..|.+.++++|.|.+..
T Consensus 70 AIQkAIdaA~a~~GGGtVyVPa-G~~~~tYlvt~tI~LkSnV~L~Ge~~A 118 (514)
T 2vbk_A 70 AIQNAIDAVASLPSGGELFIPA-SNQAVGYIVGSTLLIPGGVNIRGVGKA 118 (514)
T ss_dssp HHHHHHHHHHTSTTCEEEECCC-CSSTTCEEESSCEEECTTEEEECCSTT
T ss_pred HHHHHHHHHhhcCCCeEEEECC-CCcceeEEECCeEEecCCeEEEEecCc
Confidence 3666664 23678888875 5 6777888999999999998544
No 61
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=92.22 E-value=0.88 Score=42.96 Aligned_cols=85 Identities=16% Similarity=0.219 Sum_probs=53.2
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCe-EEee-CCceEEEeeeeeecCCCCceeccc---
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDG-VSIF-GGSHVWVDHCSLSNCNDGLIDAIH--- 231 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~Da-I~I~-gs~nVWIDHcs~s~~~DgliDv~~--- 231 (283)
+-+|.|.+++||+|.|..|..+..... +.|..+| +...-.|+ |.+. ++++|=|.+|.|....-+++--..
T Consensus 133 ~DaI~i~~s~nVWIDH~s~s~~~~~d~----~~~~~~G-~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~ 207 (355)
T 1pcl_A 133 WDAAVIDNSTNVWVDHVTISDGSFTDD----KYTTKDG-EKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSN 207 (355)
T ss_pred CceEEecCCCcEEEEeeEEeccccCcc----ccccccC-ccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCC
Confidence 446889999999999999996532110 0011122 11112344 4455 689999999999886555443111
Q ss_pred -----CCceEEEEcceeccc
Q 023390 232 -----GSTAITISNNYMTHH 246 (283)
Q Consensus 232 -----gs~~ITISnn~f~~H 246 (283)
+.-+||+-+|+|.++
T Consensus 208 ~~~d~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 208 GSQDSGKLRVTFHNNVFDRV 227 (355)
T ss_pred cccccCcceEEEECcEEeCC
Confidence 123799999999854
No 62
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=89.34 E-value=1.4 Score=42.52 Aligned_cols=85 Identities=18% Similarity=0.269 Sum_probs=51.2
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCe-EEee-CCceEEEeeeeeecCCCCceeccc---
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDG-VSIF-GGSHVWVDHCSLSNCNDGLIDAIH--- 231 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~Da-I~I~-gs~nVWIDHcs~s~~~DgliDv~~--- 231 (283)
+-+|.|.+++||+|.|..|..+...+ .+.|..+| |...-.|+ |.+. ++++|=|-+|-|....-+++--..
T Consensus 189 ~DaI~i~~s~nVWIDHcs~s~~~~~d----~~~~~~~G-r~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~ 263 (416)
T 1vbl_A 189 YDSISIEGSSHIWIDHNTFTDGDHPD----RSLGTYFG-RPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSR 263 (416)
T ss_dssp CCSEEEESCEEEEEESCEEECTTCCG----GGSCEETT-EECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTC
T ss_pred CceEEecCCceEEEEccEEecCCCcc----cccccccC-cceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCC
Confidence 34688999999999999999643110 00111222 11112343 4555 678888888888875444433111
Q ss_pred ----CCceEEEEcceeccc
Q 023390 232 ----GSTAITISNNYMTHH 246 (283)
Q Consensus 232 ----gs~~ITISnn~f~~H 246 (283)
+.-.||+-+|+|.++
T Consensus 264 ~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 264 MADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp GGGTTCCCEEEESCEEEEE
T ss_pred cccCCceEEEEECcEecCC
Confidence 123699999999853
No 63
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=88.64 E-value=1.5 Score=42.03 Aligned_cols=85 Identities=22% Similarity=0.228 Sum_probs=51.1
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCe-EEee-CCceEEEeeeeeecCCCCceeccc---
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDG-VSIF-GGSHVWVDHCSLSNCNDGLIDAIH--- 231 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~Da-I~I~-gs~nVWIDHcs~s~~~DgliDv~~--- 231 (283)
+-+|.|.+++||+|.|..|..+.... .+.|..+|. ...-.|+ |.+. ++++|=|-+|-|....-+++--..
T Consensus 183 ~DaI~i~~s~nVWIDHcs~s~~~~~d----~~~~~~~G~-~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~ 257 (399)
T 2o04_A 183 YDNITINGGTHIWIDHCTFNDGSRPD----STSPKYYGR-KYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSK 257 (399)
T ss_dssp CCSEEEESCEEEEEESCEEECTTCCG----GGSCEETTE-ECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTC
T ss_pred CCeEEecCCCcEEEEeeeeecCCCcc----ccccccccc-eeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCC
Confidence 34688899999999999999643100 000112221 1112243 4565 678888888888875444433111
Q ss_pred ----CCceEEEEcceeccc
Q 023390 232 ----GSTAITISNNYMTHH 246 (283)
Q Consensus 232 ----gs~~ITISnn~f~~H 246 (283)
+.-.||+-+|+|.++
T Consensus 258 ~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 258 TSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp GGGTTCCCEEEESCEEEEE
T ss_pred ccccCceeEEEECcEecCC
Confidence 123899999999853
No 64
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=88.60 E-value=4.6 Score=41.86 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=24.0
Q ss_pred CCeEEEEeeeeEEEeCceEEecCCcEEEeeCC
Q 023390 119 EPLWIIFARDMVITLKEELIMNSFKTIDGRGA 150 (283)
Q Consensus 119 ~P~~IvF~~~g~I~L~~~L~i~snkTI~G~ga 150 (283)
.|.+|+|-. |+..++..|.+.+++.|.|.+.
T Consensus 89 ~~~~V~~P~-GtYlvs~tI~l~~~t~L~G~~~ 119 (758)
T 3eqn_A 89 QPALVYFPP-GTYKVSSPLVVLYQTQLIGDAK 119 (758)
T ss_dssp SCEEEEECS-SEEEESSCEECCTTEEEEECSS
T ss_pred cceEEEECC-ceEEEcccEEccCCeEEEecCC
Confidence 356777764 6777888888888999988865
No 65
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=88.18 E-value=6.3 Score=38.14 Aligned_cols=103 Identities=12% Similarity=0.087 Sum_probs=62.3
Q ss_pred hHHHhhhc-----CCCeEEEEeeeeEEEeCceEEe---cCCcEEEeeCCc---eEEeC----------------------
Q 023390 110 TLRYAVIQ-----DEPLWIIFARDMVITLKEELIM---NSFKTIDGRGAS---VHIAG---------------------- 156 (283)
Q Consensus 110 tLr~av~~-----~~P~~IvF~~~g~I~L~~~L~i---~snkTI~G~ga~---~~I~~---------------------- 156 (283)
|+.+||.. ...+++++=..|+.+ +.|.| ++|+||.|.|.. ++|..
T Consensus 91 TIqeAVdaap~~~~~~r~vI~Ik~GvY~--E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~~~~~~d~~~~~n~~G~~~ 168 (422)
T 3grh_A 91 TIQAAVDAAIIKRTNKRQYIAVMPGEYQ--GTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYM 168 (422)
T ss_dssp SHHHHHHHHHTTCCSSCEEEEECSEEEE--SCEEECCCSSCEEEEECSSSGGGEEEEECCCTTSCHHHHHHHHCGGGSSC
T ss_pred CHHHHHHhchhcCCCccEEEEEeCCeEe--eeEEecCCCCcEEEEeccCCCceEEEeecccccccccccccccccccccc
Confidence 67777753 233444444456544 56788 489999999874 44320
Q ss_pred ----------------C--------CeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceE
Q 023390 157 ----------------G--------PCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHV 212 (283)
Q Consensus 157 ----------------G--------~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nV 212 (283)
+ +.+.+ .+++++.+||+|++...... + ....-.-|+.+ .+.++
T Consensus 169 ~G~~aw~tf~~~~~~~sat~gT~~SAT~~V-~g~~F~a~niTf~Ntag~~~----------~-~~~~QAVAL~v-~gDr~ 235 (422)
T 3grh_A 169 PGKPAWYMYDSCQSKRSDSIGVLCSAVFWS-QNNGLQLQNLTIENTLGDSV----------D-AGNHPAVALRT-DGDQV 235 (422)
T ss_dssp TTSTTHHHHHHHHTCCSSSCCGGGCCSEEE-CCTTCEEEEEEEEETTGGGS----------C-SSCCCCCSEEE-CCSSE
T ss_pred cCccccccccccccccccceeccceEEEEE-ECCCEEEEeeEEEeCCCCCC----------C-CCCCceEEEEe-cCCcE
Confidence 0 11233 57999999999998542100 0 00112345555 46888
Q ss_pred EEeeeeeecCCCCce
Q 023390 213 WVDHCSLSNCNDGLI 227 (283)
Q Consensus 213 WIDHcs~s~~~Dgli 227 (283)
.+.+|.|....|=|+
T Consensus 236 ~fy~C~f~G~QDTLy 250 (422)
T 3grh_A 236 QINNVNILGRQNTFF 250 (422)
T ss_dssp EEEEEEEECSTTCEE
T ss_pred EEEeeEEEeecceee
Confidence 889998888777665
No 66
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=87.64 E-value=3 Score=39.26 Aligned_cols=81 Identities=19% Similarity=0.170 Sum_probs=49.4
Q ss_pred CCeEEEEeeccEEEEeeEEEecccCCCceeecCCCcccc-CcCCCCCe-EEee-CCceEEEeeeeeecCCCCceecccC-
Q 023390 157 GPCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGW-RTISDGDG-VSIF-GGSHVWVDHCSLSNCNDGLIDAIHG- 232 (283)
Q Consensus 157 G~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~-r~~~~~Da-I~I~-gs~nVWIDHcs~s~~~DgliDv~~g- 232 (283)
|-+|.+.+++||+|.|..|...... ..+. ......|+ +.+. ++.+|=|.+|-|....-..+.-...
T Consensus 130 ~DaI~i~~s~nVWIDH~s~s~~~~~----------~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~ 199 (353)
T 1air_A 130 GDMIRVDDSPNVWVDHNELFAANHE----------CDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS 199 (353)
T ss_dssp CCSEEEESCCSEEEESCEEECCSCC----------CTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTT
T ss_pred CCeEEeeCCCcEEEEeeEEecCCcc----------cccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcC
Confidence 3458888999999999999842100 0000 00012344 4553 6888888888888654444321111
Q ss_pred --CceEEEEcceecccC
Q 023390 233 --STAITISNNYMTHHN 247 (283)
Q Consensus 233 --s~~ITISnn~f~~H~ 247 (283)
..+||+-+|+|.++.
T Consensus 200 ~~g~~vT~hhN~f~~~~ 216 (353)
T 1air_A 200 DTGRNITYHHNYYNDVN 216 (353)
T ss_dssp CCCCEEEEESCEEEEEE
T ss_pred CCCceEEEEceEEcCCc
Confidence 147999999997643
No 67
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=86.79 E-value=1.9 Score=40.78 Aligned_cols=85 Identities=16% Similarity=0.239 Sum_probs=50.7
Q ss_pred CCeEEEEe-eccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCe-EEee-CCceEEEeeeeeecCCCCceeccc--
Q 023390 157 GPCITVQY-VTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDG-VSIF-GGSHVWVDHCSLSNCNDGLIDAIH-- 231 (283)
Q Consensus 157 G~~i~i~~-a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~Da-I~I~-gs~nVWIDHcs~s~~~DgliDv~~-- 231 (283)
|-+|.|.+ ++||+|.|..|..+..... +.|..+| |...-.|+ |.+. ++++|=|-+|-|....-++|--..
T Consensus 143 ~DaI~i~~~s~nVWIDHcs~s~~~~~~~----~~~~~~G-~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~ 217 (361)
T 1pe9_A 143 WDAMNITNGAHHVWIDHVTISDGNFTDD----MYTTKDG-ETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDS 217 (361)
T ss_dssp CCSEEEETTCEEEEEESCEEECTTSCGG----GCCEETT-EECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTT
T ss_pred CceEEeecCCceEEEEccEeeccccccc----ccccccC-cceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCC
Confidence 44689998 9999999999996531100 0011122 11122343 5565 577888888888765444333111
Q ss_pred ------CCceEEEEcceeccc
Q 023390 232 ------GSTAITISNNYMTHH 246 (283)
Q Consensus 232 ------gs~~ITISnn~f~~H 246 (283)
+.-.||+-+|+|.++
T Consensus 218 ~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 218 NGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp CHHHHTTCCEEEEESCEEEEE
T ss_pred CcccccCcceEEEECeEEcCc
Confidence 223799999999753
No 68
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=84.12 E-value=3.8 Score=38.09 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=48.4
Q ss_pred CCeEEEE-----eeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCe-EEee-CCceEEEeeeeeecCCCCceec
Q 023390 157 GPCITVQ-----YVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDG-VSIF-GGSHVWVDHCSLSNCNDGLIDA 229 (283)
Q Consensus 157 G~~i~i~-----~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~Da-I~I~-gs~nVWIDHcs~s~~~DgliDv 229 (283)
|-+|.|. .++||+|.|..|....... ... .+.-.|+ |.+. ++++|=|-+|-|....-+++--
T Consensus 113 ~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~--------~~~---~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G 181 (330)
T 2qy1_A 113 ADSISLEGNSSGEPSKIWVDHNTVFASLTKC--------SGA---GDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNG 181 (330)
T ss_dssp CCSEEEECBTTBCCEEEEEESCEEECCCCCC--------TTC---TTCSSCCSEEEESSCEEEEEESCEEEEEEECCEES
T ss_pred CcceeeccccCcccccEEEEeEEEEcccccc--------ccC---CcceeecccccccCcceEEEEcceeccCCeEEEEC
Confidence 4468887 5999999999997422100 000 1112243 4555 5788888888887654444331
Q ss_pred c------cCCceEEEEcceeccc
Q 023390 230 I------HGSTAITISNNYMTHH 246 (283)
Q Consensus 230 ~------~gs~~ITISnn~f~~H 246 (283)
. .+...||+-+|+|.++
T Consensus 182 ~sd~~~~~~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 182 YSDSDTKNSAARTTYHHNRFENV 204 (330)
T ss_dssp SSTTCGGGGGCEEEEESCEEEEE
T ss_pred CCCccccCCCceEEEECcEEcCC
Confidence 1 1126999999999753
No 69
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=78.75 E-value=15 Score=32.04 Aligned_cols=52 Identities=15% Similarity=0.108 Sum_probs=41.0
Q ss_pred CcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceEEEEcceecccCe
Q 023390 196 RTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNK 248 (283)
Q Consensus 196 r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~f~~H~k 248 (283)
+..-..||+++.++..+.|.-..+..+.|..+- ..+.-.++|+|-+..+..|
T Consensus 82 wedVcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q-~Ng~Gtv~I~nF~~~~~GK 133 (196)
T 3t9g_A 82 WEDVGEDALTVKSEGVVEVIGGSAKEAADKVFQ-LNAPCTFKVKNFTATNIGK 133 (196)
T ss_dssp ESSCCSCSEEECSSEEEEEESCEEEEEEEEEEE-ECSSEEEEEEEEEEEEEEE
T ss_pred eeeeeceeeEEcCCCeEEEECCCccCCCceEEE-ECCCceEEEeeEEEccCCE
Confidence 334567999999989999999999999999888 4566778888776664433
No 70
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=76.73 E-value=11 Score=32.94 Aligned_cols=47 Identities=15% Similarity=0.142 Sum_probs=35.2
Q ss_pred CcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceEEEEccee
Q 023390 196 RTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYM 243 (283)
Q Consensus 196 r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~f 243 (283)
+..-..||+++.++..++|.-.....+.|..+- ..+.-.++|+|-+.
T Consensus 78 wedVcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q-~Ng~Gtv~I~nF~~ 124 (197)
T 1ee6_A 78 WEDVGEDALTLKSSGTVNISGGAAYKAYDKVFQ-INAAGTINIRNFRA 124 (197)
T ss_dssp ESSCCSCSEEEEESEEEEEESCEEEEEEEEEEE-ECSSEEEEEESCEE
T ss_pred eeeccccccEEcCCCeEEEECCCccCCCccEEE-ecCCceEEEeeEEE
Confidence 344567999999889999999999999888876 34555566666433
No 71
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=67.23 E-value=3.6 Score=41.59 Aligned_cols=61 Identities=13% Similarity=0.144 Sum_probs=44.6
Q ss_pred EEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEe---eCCceEEEeeee----eec--CCCCceecc
Q 023390 160 ITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSI---FGGSHVWVDHCS----LSN--CNDGLIDAI 230 (283)
Q Consensus 160 i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I---~gs~nVWIDHcs----~s~--~~DgliDv~ 230 (283)
|++.+++ |++|++++.- ..-.|.+ ..|+||.|++|. +.. -.||.
T Consensus 180 l~f~~c~---I~GITi~NSD--------------------P~w~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI---- 232 (600)
T 2x6w_A 180 GRSYNCS---VTGITFQNGD--------------------VTWAITLGWNGYGSNCYVRKCRFINLVNSSVNADHS---- 232 (600)
T ss_dssp CSEEEEE---EESCEEESCC--------------------CSCSEEECBTTBEEEEEEESCEEECCCCCSSCCCEE----
T ss_pred EEEeeeE---EeCeEEECCC--------------------CccEEEeCCCCCcccEEEeCeEEcceEecCCCCCEE----
Confidence 4455665 8999998631 1234666 789999999999 443 35665
Q ss_pred cCCceEEEEcceecccCeEEEe
Q 023390 231 HGSTAITISNNYMTHHNKVMLL 252 (283)
Q Consensus 231 ~gs~~ITISnn~f~~H~k~~Li 252 (283)
|+|+||.|..-+.+.-+
T Consensus 233 -----V~I~nc~I~tGDDCIAI 249 (600)
T 2x6w_A 233 -----TVYVNCPYSGVESCYFS 249 (600)
T ss_dssp -----EEEECSSSEEEESCEEE
T ss_pred -----EEEEeeEEecCCcEEEE
Confidence 99999999988777777
No 72
>1vib_A Neurotoxin B-IV; hydroxylation; HET: HYP; NMR {Cerebratulus lacteus} SCOP: g.2.2.1
Probab=50.79 E-value=1.2 Score=30.53 Aligned_cols=19 Identities=42% Similarity=0.854 Sum_probs=15.8
Q ss_pred CcceeecCccccccccccc
Q 023390 56 IDDCWRCDPKWEENRQQLA 74 (283)
Q Consensus 56 id~cwr~~~~w~~~r~~la 74 (283)
-|+|.||+..|+-.|-.-|
T Consensus 20 yd~ci~cqgkwagkrgkca 38 (55)
T 1vib_A 20 YDLCIRCQGKWAGKRGKCA 38 (55)
T ss_dssp HHHHCCTTGGGTTTHHHHH
T ss_pred hhHHheecceeccccCcch
Confidence 5899999999998885544
No 73
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=47.80 E-value=49 Score=30.42 Aligned_cols=110 Identities=14% Similarity=0.146 Sum_probs=63.4
Q ss_pred CeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCC-----Cceecc--
Q 023390 158 PCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCND-----GLIDAI-- 230 (283)
Q Consensus 158 ~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~D-----gliDv~-- 230 (283)
..|++ .+.++.|+|.+|.+-.. +.......+|-....-.++---|+|....|+++|.|..... +.|-+-
T Consensus 115 vAl~v-~~d~~~f~~c~f~g~QD---TLy~~~~r~~~~~c~I~G~vDFIfG~~~a~f~~c~i~~~~~~~~~~~~itA~~r 190 (319)
T 1gq8_A 115 VALRV-GSDLSAFYRCDILAYQD---SLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGR 190 (319)
T ss_dssp CSEEE-CCTTEEEEEEEEECSTT---CEEECSSEEEEESCEEEESSSCEEESCEEEEESCEEEECCCSTTCCEEEEEECC
T ss_pred EEEEe-cCCcEEEEEeEECccce---eeeecCccEEEEecEEEeeeeEEecCCcEEEEeeEEEEecCCCCCceEEEeCCC
Confidence 45777 58999999999996321 11111111111111112222235677789999999986432 223221
Q ss_pred ---cCCceEEEEcceecccCe--------EEEeecCCCcCCCCceeEEEEceEEcC
Q 023390 231 ---HGSTAITISNNYMTHHNK--------VMLLGHSDTFTQDKNMQVTIAFNHFGE 275 (283)
Q Consensus 231 ---~gs~~ITISnn~f~~H~k--------~~LiG~sd~~~~D~~~~VTih~N~F~~ 275 (283)
...+...|.+|.|..... ...||.+=. ..-++.|.++++.+
T Consensus 191 ~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~----~~sr~v~~~t~~~~ 242 (319)
T 1gq8_A 191 TDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWK----EYSRTVVMQSSITN 242 (319)
T ss_dssp CSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSS----TTCEEEEESCEECT
T ss_pred CCCCCCceEEEECCEEecCCCccccccceeEEecccCC----CcceEEEEeccCCC
Confidence 134578999999986542 245675421 13489999999863
No 74
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=47.37 E-value=55 Score=30.08 Aligned_cols=110 Identities=15% Similarity=0.178 Sum_probs=63.4
Q ss_pred CeEEEEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCC-----Cceecc--
Q 023390 158 PCITVQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCND-----GLIDAI-- 230 (283)
Q Consensus 158 ~~i~i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~D-----gliDv~-- 230 (283)
..|++ .+.+++++|.+|.+-.. +....+..+|-....-.++---|+|....|+++|.|..-.. +.+-+-
T Consensus 111 vAl~v-~~d~~~f~~c~f~g~QD---TLy~~~~r~~~~~c~I~G~vDFIfG~~~avf~~c~i~~~~~~~~~~~~itA~~r 186 (317)
T 1xg2_A 111 VALRV-GADMSVINRCRIDAYQD---TLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGR 186 (317)
T ss_dssp CSEEE-CCTTEEEESCEEECSTT---CEEECSSEEEEESCEEEESSSCEEECCEEEEESCEEEECCCSTTCCEEEEEECC
T ss_pred EEEEE-eCCcEEEEEeEeCcccc---ceeecCccEEEEeeEEEeceeEEcCCceEEEeeeEEEEeccCCCCccEEEecCc
Confidence 45777 58999999999996321 11111111111111112222235677789999999986431 223221
Q ss_pred ---cCCceEEEEcceecccCe--------EEEeecCCCcCCCCceeEEEEceEEcC
Q 023390 231 ---HGSTAITISNNYMTHHNK--------VMLLGHSDTFTQDKNMQVTIAFNHFGE 275 (283)
Q Consensus 231 ---~gs~~ITISnn~f~~H~k--------~~LiG~sd~~~~D~~~~VTih~N~F~~ 275 (283)
...+...|.+|.|..... ...||.+=. ..-++.|.++++.+
T Consensus 187 ~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~----~~sr~v~~~t~~~~ 238 (317)
T 1xg2_A 187 TDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWK----EYSRTVVMESYLGG 238 (317)
T ss_dssp CCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSS----TTCEEEEESCEECT
T ss_pred CCCCCCcEEEEECCEEecCCCccccccceeEEeecccC----CCceEEEEecccCC
Confidence 134578999999986542 245675421 13489999998863
No 75
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=45.24 E-value=1.3e+02 Score=28.57 Aligned_cols=114 Identities=16% Similarity=0.190 Sum_probs=64.7
Q ss_pred CCcEEEeeCCceEEeCCCeEEEEeeccEEEEeeEEEecccCC-------------CceeecCCCcc-ccCcCCCCCeEEe
Q 023390 141 SFKTIDGRGASVHIAGGPCITVQYVTNIIIHGINIHDCKRGG-------------NANVRDSPSHY-GWRTISDGDGVSI 206 (283)
Q Consensus 141 snkTI~G~ga~~~I~~G~~i~i~~a~NVIIrnL~i~~~~~~g-------------~~~ir~~~~~~-g~r~~~~~DaI~I 206 (283)
|++||.|.-+.-... |-++.+.+.++|-+.+++|.+.+-.| .-+||+-.+.| |..+....-++-.
T Consensus 142 s~~ti~~nk~~ds~q-g~qvs~~gg~dvsv~~i~fsn~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~ 220 (542)
T 2x3h_A 142 SNITVESNKATDTTQ-GQQVSLAGGSDVTVSDVNFSNVKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLA 220 (542)
T ss_dssp EEEEEECCCSSTTCB-CCSEEEESCEEEEEEEEEEEEECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEE
T ss_pred eeEEEecccCCcccc-ceEEEecCCCcceEeeeeeeecCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEe
Confidence 566666653322222 55677777788899999998765211 01222222222 2212222233444
Q ss_pred eCCceEEEeeeeeecC-CCCceecccCCceEEEEcceecccCeEEEeecC
Q 023390 207 FGGSHVWVDHCSLSNC-NDGLIDAIHGSTAITISNNYMTHHNKVMLLGHS 255 (283)
Q Consensus 207 ~gs~nVWIDHcs~s~~-~DgliDv~~gs~~ITISnn~f~~H~k~~LiG~s 255 (283)
+.+.|-.||.+-..+. .-|.+..+..+.+=-+||-+=.+.+.+..-|..
T Consensus 221 dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cqhv~yngte 270 (542)
T 2x3h_A 221 DSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQHVTYNGTE 270 (542)
T ss_dssp ESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCSEEEEEECS
T ss_pred ccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccceeEEECCcc
Confidence 5678888888877764 567777666666666676666666666655554
No 76
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=31.34 E-value=75 Score=31.32 Aligned_cols=24 Identities=25% Similarity=0.322 Sum_probs=19.1
Q ss_pred CeEEee-CCceEEEeeeeeecCCCC
Q 023390 202 DGVSIF-GGSHVWVDHCSLSNCNDG 225 (283)
Q Consensus 202 DaI~I~-gs~nVWIDHcs~s~~~Dg 225 (283)
++|.+. +++||.|..|.|+-+.|-
T Consensus 210 ~gL~f~eSCrNV~IsnC~FsVGDdc 234 (514)
T 2vbk_A 210 VGLHFLGQCVSVSVSSCHFSRGNYS 234 (514)
T ss_dssp EEEEEESCCEEEEEESCEEECTTSC
T ss_pred cCccccCCCCeEEEeccEEecCcce
Confidence 577766 589999999999976553
No 77
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=24.51 E-value=1.5e+02 Score=25.75 Aligned_cols=67 Identities=9% Similarity=0.137 Sum_probs=45.4
Q ss_pred EEeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceEEEEcc
Q 023390 162 VQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNN 241 (283)
Q Consensus 162 i~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn 241 (283)
..+...|+|+|....+.-. ..| +-+.. .-.++|.||+++++.....++-.-.....++++|.
T Consensus 115 ~Ng~Gtv~I~nF~~~~~GK----l~R-----------SCGnc---~~~r~v~i~~v~~~n~k~~l~rtdS~~~~~~~~n~ 176 (196)
T 3t9g_A 115 LNAPCTFKVKNFTATNIGK----LVR-----------QNGNT---TFKVVIYLEDVTLNNVKSCVAKSDSPVSELWYHNL 176 (196)
T ss_dssp ECSSEEEEEEEEEEEEEEE----EEE-----------ECTTC---CSCEEEEEEEEEEEEEEEEEEECCCTTCEEEEEEE
T ss_pred ECCCceEEEeeEEEccCCE----EEE-----------cCCCC---CceeEEEEeCeEEeCCEEEEEEcCCCCCEEEEecc
Confidence 3355678888888876311 222 12222 23489999999999998888876556678888888
Q ss_pred eeccc
Q 023390 242 YMTHH 246 (283)
Q Consensus 242 ~f~~H 246 (283)
..++-
T Consensus 177 ~~~~~ 181 (196)
T 3t9g_A 177 NVNNC 181 (196)
T ss_dssp EEEEE
T ss_pred eecCC
Confidence 87753
No 78
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=22.01 E-value=3.1e+02 Score=23.75 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=43.8
Q ss_pred EeeccEEEEeeEEEecccCCCceeecCCCccccCcCCCCCeEEeeCCceEEEeeeeeecCCCCceecccCCceEEEEcce
Q 023390 163 QYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNY 242 (283)
Q Consensus 163 ~~a~NVIIrnL~i~~~~~~g~~~ir~~~~~~g~r~~~~~DaI~I~gs~nVWIDHcs~s~~~DgliDv~~gs~~ITISnn~ 242 (283)
.+...|+|+|....+.- -++| +-+.. + ..++|-|+++.++.....++-....-+.+||+|..
T Consensus 112 Ng~Gtv~I~nF~~~~~G----Kl~R-----------ScGnc-~--~~r~v~i~~v~~~~~k~~i~~~ds~gdtati~n~~ 173 (197)
T 1ee6_A 112 NAAGTINIRNFRADDIG----KLVR-----------QNGGT-T--YKVVMNVENCNISRVKDAILRTDSSTSTGRIVNTR 173 (197)
T ss_dssp CSSEEEEEESCEEEEEE----EEEE-----------ECTTC-C--SCEEEEEESCEEEEEEEEEEECCCTTCEEEEESCE
T ss_pred cCCceEEEeeEEEccCC----EEEE-----------cCCCC-c--cceEEEEeceEEECceEEEEEecCCCCEEEEEecc
Confidence 34566888887776521 1233 22232 1 24899999999999877666554455889999987
Q ss_pred ecccC
Q 023390 243 MTHHN 247 (283)
Q Consensus 243 f~~H~ 247 (283)
..++.
T Consensus 174 ~~~v~ 178 (197)
T 1ee6_A 174 YSNVP 178 (197)
T ss_dssp EESCS
T ss_pred cCCcc
Confidence 76654
No 79
>3bh1_A UPF0371 protein DIP2346; structural genomics, unknown function, protein structure INI PSI-2; 2.51A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=20.81 E-value=62 Score=31.63 Aligned_cols=36 Identities=31% Similarity=0.469 Sum_probs=26.6
Q ss_pred CcccccCCccCCCCCeEEEEcCCCCCCCCCCCchhHHHhhhc
Q 023390 76 CAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQ 117 (283)
Q Consensus 76 ~a~GfG~~ttGG~gG~v~~VT~~~d~d~~~~~pGtLr~av~~ 117 (283)
.-+|||++-.==.--.+|+||.+. ||.|-|..+++|
T Consensus 159 SdeGyGkN~YIeTtrpLVVVTAPG------PGSGKmATCLSQ 194 (507)
T 3bh1_A 159 SDEGFGLNEYAETTRDLVVVTAPG------PGSGKLATCLSQ 194 (507)
T ss_dssp STTTGGGSCCCCCCSSEEEEECSS------TTSCHHHHHHHH
T ss_pred cccccCCCCceeccCCeEEEeCCC------CCccHHHHHHHH
Confidence 569999975433446789999664 677778888887
Done!