BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023391
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana
GN=At4g09580 PE=1 SV=1
Length = 287
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/287 (76%), Positives = 249/287 (86%), Gaps = 4/287 (1%)
Query: 1 MAAARNVAAGDGSR-VFRDEEESVNGKVKEG---DESPTAKRFKSERFPLTHWEFAAFVG 56
MAA RN+ G+R + +DEE +G D+SPT KR KSERFPL+ WEFA F
Sbjct: 1 MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTKSERFPLSRWEFAVFFT 60
Query: 57 VFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYI 116
VFL+F TGLFCIYLTMPAA+YGKLK+PRTI+DLRLLK+NL +YA +Y FI+GYCSTYI
Sbjct: 61 VFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFILGYCSTYI 120
Query: 117 FMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEK 176
FMQTFMIPGTIFMSLLAGALFGV+RG +LVV NATAGA SCFFLSKL+GRPLV+W WPEK
Sbjct: 121 FMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEK 180
Query: 177 LRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASY 236
LRFFQAEIAKRR++LLNYMLFLRITP+LPNLFINL+SPIVDIPFH+FFLATL+GL+PASY
Sbjct: 181 LRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASY 240
Query: 237 ITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRKRIYE 283
ITVRAGLALGDL+SVKDLYDFKTL VLFLIGS+ I P LLKRKR+YE
Sbjct: 241 ITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRKRVYE 287
>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum
GN=DDB_G0275543 PE=3 SV=2
Length = 334
Score = 184 bits (468), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 149/235 (63%)
Query: 45 PLTHWEFAAFVGVFLLFVTGLFCIYLTMPAADYGKLKLPRTIADLRLLKDNLATYAQDYP 104
PL W GV + + LF + ++ ++LP+ D++LL D L+ Y D
Sbjct: 96 PLPLWLLVIVFGVSISVIVFLFLNFPSLSPQHKQLIRLPKNFKDVKLLSDILSQYTDDNY 155
Query: 105 VPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLI 164
I + Y F+Q F IPG++F+S L+G LFG+ G LV F AT GA+ + +S I
Sbjct: 156 FIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSYLISYYI 215
Query: 165 GRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFF 224
GR LV +P+KL+ F ++++R+ LLNY++FLRITP LPN FINLASP++D+P H F
Sbjct: 216 GRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPIHTFA 275
Query: 225 LATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
+ T IG++PA+++ V+AG+ + ++Q+ D++D K++L + + + ILPTL+++K
Sbjct: 276 IGTFIGIMPATFLAVKAGIQIQNIQNPSDIFDLKSILTMAALALLSILPTLIQKK 330
>sp|Q5U4K5|TM41B_XENLA Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1
Length = 278
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 154/270 (57%), Gaps = 10/270 (3%)
Query: 19 EEESVNG----KVKEGDE--SPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTM 72
E S G + G+E +P A + SE V +FL + +F +Y
Sbjct: 4 HERSHTGGHTFQCNHGNEKKAPAAGKVHSEGGS-ARMSLLILVSIFLCAASVMFLVYKYF 62
Query: 73 PA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFM 129
P + K+K+PR + D + L L+ Y + V ++ Y +TYIF+QTF IPG+IF+
Sbjct: 63 PQLSEEELEKIKVPRDMDDAKALGKVLSKYKDTFYVEVLVAYFTTYIFLQTFAIPGSIFL 122
Query: 130 SLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRRE 189
S+L+G L+ L LV + GAS C+ LS L+GRP+V + +K + ++ + R+
Sbjct: 123 SILSGFLYPFPLALFLVCLCSGLGASFCYLLSYLVGRPVVYKYLSDKAIKWSQQVERHRD 182
Query: 190 KLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQ 249
L+NY++FLRITP LPN FIN+ SP++++P +FFL T IG+ P S++ ++AG L L
Sbjct: 183 HLINYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLT 242
Query: 250 SVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
+ + + ++++L ++ + ILP + ++K
Sbjct: 243 TAGEAVSWNSVIILMVLAVLSILPAIFQKK 272
>sp|Q9VX39|TM41_DROME Transmembrane protein 41 homolog OS=Drosophila melanogaster
GN=CG8408 PE=2 SV=2
Length = 320
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 131/227 (57%), Gaps = 3/227 (1%)
Query: 56 GVFLLFVTGLFCIYLTMP---AADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYC 112
G+F+ + + +Y P A++ LK+PR I D ++L L Y Y + G
Sbjct: 87 GIFVASLVTMCYVYAIFPELNASEKQHLKIPRDIQDAKMLAKVLDRYKDMYYFEVMFGVV 146
Query: 113 STYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWF 172
Y+F+QTF IPG++F+S+L G L+ L L+ F + GA+ C+ LS L+GR L+ F
Sbjct: 147 VAYVFLQTFAIPGSLFLSILLGFLYKFPIALFLICFCSALGATLCYTLSNLVGRRLIRHF 206
Query: 173 WPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLI 232
WP+K + + + R+ L NYMLFLR+TP LPN FINLASP++ +P HIF L T G+
Sbjct: 207 WPKKTSEWSKHVEEYRDSLFNYMLFLRMTPILPNWFINLASPVIGVPLHIFALGTFCGVA 266
Query: 233 PASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
P S I ++AG L + S + + + ++ +L +LP LLK K
Sbjct: 267 PPSVIAIQAGKTLQKMTSSSEAFSWTSMGILMACACASLLPGLLKNK 313
>sp|Q5ZIL6|TM41B_CHICK Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1
Length = 269
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 141/228 (61%), Gaps = 3/228 (1%)
Query: 55 VGVFLLFVTGLFCIYLTMP--AADYGK-LKLPRTIADLRLLKDNLATYAQDYPVPFIIGY 111
V +F + +F +Y P + + GK +K+PR + D + L L+ Y + V ++ Y
Sbjct: 36 VSIFTIAAFLMFLVYKNFPQLSEEEGKCIKIPRDMDDAKALGKVLSKYKDTFYVQVLVAY 95
Query: 112 CSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSW 171
+TY+F+QTF IPG+IF+S+L+G L+ L LV + GAS C+ LS L+GRP+V
Sbjct: 96 FATYVFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYK 155
Query: 172 FWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGL 231
+ EK + ++ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+
Sbjct: 156 YLTEKAVKWSEQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGV 215
Query: 232 IPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
P S++ ++AG L L + + + +L VL ++ + ILP L ++K
Sbjct: 216 APPSFVAIKAGTTLYQLTTAGEAVSWNSLFVLMILAILSILPALFQKK 263
>sp|Q8K1A5|TM41B_MOUSE Transmembrane protein 41B OS=Mus musculus GN=Tmem41b PE=2 SV=1
Length = 291
Score = 167 bits (423), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 151/271 (55%), Gaps = 9/271 (3%)
Query: 12 GSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLT 71
G R R + + G +E P A+ S R L V +F +F +Y
Sbjct: 21 GDRAVRTQGSAAPGSKDHLNEKPCAEA-GSARTSLL-----ILVSIFSCAAFVMFLVYKN 74
Query: 72 MPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIF 128
P + +K+PR + D + L L+ Y + V ++ Y +TYIF+QTF IPG+IF
Sbjct: 75 FPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPGSIF 134
Query: 129 MSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRR 188
+S+L+G L+ L LV + GAS C+ LS L+GRP+V + EK + ++ + R
Sbjct: 135 LSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHR 194
Query: 189 EKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDL 248
E L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+ P S++ ++AG L L
Sbjct: 195 EHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLHQL 254
Query: 249 QSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
+ + + ++ +L ++ + ILP + +++
Sbjct: 255 TTAGEAVSWSSVFILMVLALLSILPAIFQKQ 285
>sp|Q5RBZ8|TM41B_PONAB Transmembrane protein 41B OS=Pongo abelii GN=TMEM41B PE=2 SV=1
Length = 291
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 155/290 (53%), Gaps = 27/290 (9%)
Query: 1 MAAARNVAAGDGSRVFRDEEESVNGKVKEGDESPTAKRFKSERFPLTHWEFAA------- 53
M A GDG+ R G +P ++ ++ E+ W A
Sbjct: 12 MGADHTTPVGDGAAGTR------------GPAAPGSRDYQKEK----SWAEAGSARMSLL 55
Query: 54 -FVGVFLLFVTGLFCIYLTMPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFII 109
V +FL +F +Y P + +K+PR + D + L L+ Y + V ++
Sbjct: 56 ILVSIFLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLV 115
Query: 110 GYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLV 169
Y +TYIF+QTF IPG+IF+S+L+G L+ L LV + GAS C+ LS L+GRP+V
Sbjct: 116 AYFATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVV 175
Query: 170 SWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLI 229
+ EK + ++ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +
Sbjct: 176 YKYLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFL 235
Query: 230 GLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
G+ P S++ ++AG L + + + ++ +L ++ + ILP + ++K
Sbjct: 236 GVAPPSFVAIKAGTTLHQPTTAGEAVSWNSIFILMILAVLSILPAIFQKK 285
>sp|Q5BJD5|TM41B_HUMAN Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1
Length = 291
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 138/228 (60%), Gaps = 3/228 (1%)
Query: 55 VGVFLLFVTGLFCIYLTMPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGY 111
V +FL +F +Y P + +K+PR + D + L L+ Y + V ++ Y
Sbjct: 58 VSIFLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAY 117
Query: 112 CSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSW 171
+TYIF+QTF IPG+IF+S+L+G L+ L LV + GAS C+ LS L+GRP+V
Sbjct: 118 FATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYK 177
Query: 172 FWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGL 231
+ EK + ++ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+
Sbjct: 178 YLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGV 237
Query: 232 IPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
P S++ ++AG L L + + + ++ +L ++ + ILP + ++K
Sbjct: 238 APPSFVAIKAGTTLYQLTTAGEAVSWNSIFILMILAVLSILPAIFQKK 285
>sp|A4II98|TM41B_XENTR Transmembrane protein 41B OS=Xenopus tropicalis GN=tmem41b PE=2
SV=1
Length = 278
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 140/228 (61%), Gaps = 3/228 (1%)
Query: 55 VGVFLLFVTGLFCIYLTMPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGY 111
V +FL + +F +Y P + K+K+PR + D + L L+ Y + V ++ Y
Sbjct: 45 VSIFLCAASIMFLVYKHFPQLSEEEREKIKVPRDMDDAKALGKVLSKYKDTFYVEVLVAY 104
Query: 112 CSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSW 171
+TYIF+QTF IPG+IF+S+L+G L+ L LV + GAS + LS L+GRP+V
Sbjct: 105 FTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFSYLLSYLVGRPVVYK 164
Query: 172 FWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGL 231
+ +K + ++ + R+ L+NY++FLRITP LPN FIN+ SP++++P +FFL T IG+
Sbjct: 165 YLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGV 224
Query: 232 IPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
P S++ ++AG L L + + + ++++L ++ + ILP + ++K
Sbjct: 225 APPSFVAIKAGTTLYQLTTAGEAVSWNSVIILMVLAVLSILPAIFQKK 272
>sp|Q5FVN2|TM41B_RAT Transmembrane protein 41B OS=Rattus norvegicus GN=Tmem41b PE=2 SV=1
Length = 291
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 134/218 (61%), Gaps = 3/218 (1%)
Query: 65 LFCIYLTMPA---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTF 121
+F +Y P + +K+PR + D + L L+ Y + V ++ Y +TYIF+QTF
Sbjct: 68 MFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTF 127
Query: 122 MIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQ 181
IPG+IF+S+L+G L+ L LV + GAS C+ LS L+GRP+V + EK +
Sbjct: 128 AIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWS 187
Query: 182 AEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRA 241
++ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+ P S++ ++A
Sbjct: 188 QQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKA 247
Query: 242 GLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
G L L + + + ++ +L ++ + ILP + ++K
Sbjct: 248 GTTLYQLTTAGEAVSWNSVFILMILALLSILPAIFQKK 285
>sp|A1A5V7|TM41B_DANRE Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1
Length = 282
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 150/268 (55%), Gaps = 5/268 (1%)
Query: 17 RDEEES--VNGKVKEGDESPTAKRFKSERFPLTHWEFAAFVGVFLLFVTGLFCIYLTMPA 74
R+ E S V + + E+P K +S V +F ++ ++ P
Sbjct: 9 RETESSPLVEQEPRPSKETPVPKGAQSPGGASARMSILLLVVIFACSACVMYLVFRNFPQ 68
Query: 75 ---ADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSL 131
+ K+K+P+ + D + L L+ Y Y ++ Y +TYIF+QTF IPG+IF+S+
Sbjct: 69 LSEDEREKIKIPKDMEDAKALGTVLSKYKDTYYTQVLLAYFATYIFLQTFAIPGSIFLSI 128
Query: 132 LAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKL 191
L+G L+ L LV + GAS C+ LS L+GRP+V + E+ + + ++ K RE L
Sbjct: 129 LSGYLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPMVYKYLTERAQKWSQQVDKHREHL 188
Query: 192 LNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSV 251
+NY++FLRITP LPN FIN+ SP++++P +FFL T +G+ P S++ + AG L L +
Sbjct: 189 INYIIFLRITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPPSFVAINAGTTLYKLTTA 248
Query: 252 KDLYDFKTLLVLFLIGSVIILPTLLKRK 279
+ + +LLVL ++ V ILP ++K
Sbjct: 249 GEAVSWNSLLVLGVLAVVSILPVCFQKK 276
>sp|O62126|TM41_CAEEL Transmembrane protein 41 homolog OS=Caenorhabditis elegans
GN=tag-175 PE=3 SV=1
Length = 246
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 133/228 (58%), Gaps = 7/228 (3%)
Query: 57 VFLLFVTGLFCIYLTMP---AADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCS 113
+F F +F +Y P A + LK PR + D + L L+ Y ++ + G
Sbjct: 17 IFATFAVSIFAVYSNFPEVSADEKVHLKYPRNLEDAKQLGRVLSKYKENNYSVVLCGVIV 76
Query: 114 TYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFW 173
Y+F+Q+F IPG+IF+++L+G LF ++LV + GA+ C+ +SKL GR V +
Sbjct: 77 VYVFLQSFAIPGSIFLTILSGYLFPFYVAIVLVCSCSATGAAICYTISKLFGRSFVLQKF 136
Query: 174 PEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIP 233
PE++ +Q +++K R+ LNYM+FLR+TP +PN IN+ASP++D+P FF T +G+ P
Sbjct: 137 PERIAKWQDDLSKHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVPLAPFFWGTFLGVAP 196
Query: 234 ASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVI--ILPTLLKRK 279
S++ ++AG L L + + + ++ L GS I + P LLK+K
Sbjct: 197 PSFLYIQAGSTLEQLSHTSVAWSWSS--IVLLTGSAILSLAPILLKKK 242
>sp|Q08D99|TM41A_BOVIN Transmembrane protein 41A OS=Bos taurus GN=TMEM41A PE=2 SV=1
Length = 264
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 143/239 (59%), Gaps = 13/239 (5%)
Query: 53 AFVGVFLLFVTGLFCIYL---------TMPAADYG---KLKLPRTIADLRLLKDNLATYA 100
+ +G+ L+F F +YL T+ +A+ L P +A+LR L + L Y
Sbjct: 3 SLLGLLLVFAGSTFALYLLSTRLPRASTLVSAEESGDRSLWFPSDLAELRELSEVLREYR 62
Query: 101 QDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFL 160
+++ V + +CS Y++ Q+F IPG+ F+++LAGALFG GL+L + GA+ C+ L
Sbjct: 63 KEHQVYVFLLFCSAYLYKQSFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLL 122
Query: 161 SKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPF 220
S + G+ LV +++P+K+ Q ++ + R L ++LFLR+ P PN F+NL++PI++IP
Sbjct: 123 SSVFGKQLVVFYFPDKVALLQKKVEENRNGLFFFLLFLRLFPMTPNWFLNLSAPILNIPI 182
Query: 221 HIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILP-TLLKR 278
FF + LIGLIP ++I V+ G L L S+ L+ ++T L I V ++P TL+K+
Sbjct: 183 VQFFFSVLIGLIPYNFICVQTGSILSTLTSLDALFSWETAFKLLAIALVALVPGTLIKK 241
>sp|Q9D8U2|TM41A_MOUSE Transmembrane protein 41A OS=Mus musculus GN=Tmem41a PE=2 SV=1
Length = 264
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 124/201 (61%)
Query: 79 KLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFG 138
L P +A+LR L + L Y +++ + +CS Y++ Q F IPG+ F+++LAGALFG
Sbjct: 41 SLWFPSDLAELRELSEVLREYRKEHQAYVFLLFCSAYLYKQGFAIPGSSFLNVLAGALFG 100
Query: 139 VIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFL 198
GL+L + GA+ C+ LS L G+ LV ++P+K+ Q ++ + R L ++LFL
Sbjct: 101 PWLGLLLCCVLTSVGATGCYLLSSLFGKQLVISYFPDKVALLQKKVEENRNSLFFFLLFL 160
Query: 199 RITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFK 258
R+ P PN F+NL++PI++IP FF + LIGLIP ++I V+ G L L S+ L+ ++
Sbjct: 161 RLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLTSLDALFSWE 220
Query: 259 TLLVLFLIGSVIILPTLLKRK 279
T+L L I V ++P L +K
Sbjct: 221 TVLKLLAIALVALVPGTLIKK 241
>sp|Q502G2|T41AA_DANRE Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1
Length = 281
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 121/202 (59%)
Query: 78 GKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALF 137
+LK P + +L+ + + L Y ++ ++ +CS Y++ Q F IPG+ F+++LAGALF
Sbjct: 57 SRLKFPSDLDELKEMAELLQFYKTEHTGYVLLLFCSAYLYKQAFAIPGSSFLNILAGALF 116
Query: 138 GVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLF 197
G GL+L T GA+ CF LS+ G+ + +P+K+ Q ++ + R L ++LF
Sbjct: 117 GTWFGLLLTCVLTTVGATLCFLLSQAFGKHHIVKLFPDKVAMLQKKVEENRSSLFFFLLF 176
Query: 198 LRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDF 257
LR P PN F+N+ SPI++IP +FF+A IGL+P ++I V+ G L + S+ DL+ +
Sbjct: 177 LRFFPMSPNWFLNMTSPILNIPVTLFFMAVFIGLMPYNFICVQTGSMLSQISSLDDLFSW 236
Query: 258 KTLLVLFLIGSVIILPTLLKRK 279
+L L L V +LP L RK
Sbjct: 237 SVVLKLLLTACVALLPGALIRK 258
>sp|Q96HV5|TM41A_HUMAN Transmembrane protein 41A OS=Homo sapiens GN=TMEM41A PE=2 SV=1
Length = 264
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 55 VGVFLLFVTGLFCIYLTMPAADYGK------------LKLPRTIADLRLLKDNLATYAQD 102
+G+ L+F F +YL G+ L P +A+LR L + L Y ++
Sbjct: 5 LGLLLVFAGCTFALYLLSTRLPRGRRLGSTEEAGGRSLWFPSDLAELRELSEVLREYRKE 64
Query: 103 YPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSK 162
+ + +C Y++ Q F IPG+ F+++LAGALFG GL+L + GA+ C+ LS
Sbjct: 65 HQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATCCYLLSS 124
Query: 163 LIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHI 222
+ G+ LV ++P+K+ Q ++ + R L ++LFLR+ P PN F+NL++PI++IP
Sbjct: 125 IFGKQLVVSYFPDKVALLQRKVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQ 184
Query: 223 FFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 279
FF + LIGLIP ++I V+ G L L S+ L+ + T+ L I V ++P L +K
Sbjct: 185 FFFSVLIGLIPYNFICVQTGSILSTLTSLDALFSWDTVFKLLAIAMVALIPGTLIKK 241
>sp|Q6NV38|T41AB_DANRE Transmembrane protein 41A-B OS=Danio rerio GN=tmem41ab PE=2 SV=1
Length = 278
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 125/207 (60%)
Query: 73 PAADYGKLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLL 132
P +LK P + +LR L + L Y ++ I +CS Y++ Q+F IPG+ F+++L
Sbjct: 46 PEEKVLRLKFPSDLEELRELAELLKFYKTEHTGYVFILFCSAYLYKQSFAIPGSSFLNML 105
Query: 133 AGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLL 192
+GALFG + GLI+ T G+++C+ LS+ G+ + +PEK+ Q + + R L
Sbjct: 106 SGALFGPLHGLIIACTLTTVGSTNCYLLSRTFGKRHIVRLFPEKVAMLQRMVEENRSSLF 165
Query: 193 NYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVK 252
++LFLR P PN F+N+ SPI++IP IFF + LIGLIP ++I V G L ++ S+
Sbjct: 166 FFLLFLRFFPMTPNWFLNVTSPILNIPIPIFFFSILIGLIPYNFICVHTGAVLSEINSLD 225
Query: 253 DLYDFKTLLVLFLIGSVIILPTLLKRK 279
D++ + TLL L LI V +LP L R+
Sbjct: 226 DIFSWFTLLQLLLIACVALLPGALIRR 252
>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1
Length = 209
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 94 DNLATYAQDYPVPFIIGYC-STYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATA 152
D L T+A + F++ Y +T +F+ PG+I ++L AG +FGVI G I V AT
Sbjct: 13 DGLGTWA---AIAFMLLYTVATVVFL-----PGSI-LTLGAGVVFGVILGSIYVFIGATL 63
Query: 153 GASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLA 212
GA++ F + + + R V+ +F + A +E L ++ R++P P +N A
Sbjct: 64 GATAAFLVGRYLARGWVAKKIAGNQKFKAIDEAVGKEG-LKIVILTRLSPVFPFNLLNYA 122
Query: 213 SPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQS 250
I ++ + + +L G+IP + + V G G L +
Sbjct: 123 YGITNVSLKDYVIGSL-GMIPGTIMYVYIGSLAGSLAT 159
>sp|P76221|YDJZ_ECOLI TVP38/TMEM64 family inner membrane protein YdjZ OS=Escherichia coli
(strain K12) GN=ydjZ PE=1 SV=1
Length = 235
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 27/158 (17%)
Query: 135 ALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLR----------FFQAEI 184
+LFG G +L ++ AGA+ CFF+++++GR +V EKL FF
Sbjct: 91 SLFGAFWGGLLSWTSSMAGAALCFFIARVMGREVV-----EKLTGKTVLDSMDGFF---- 141
Query: 185 AKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLA 244
R K + +L R+ P +P I+ A+ + I F FF+AT +G +PA+ + AG
Sbjct: 142 -TRYGK--HTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSM 198
Query: 245 L--GDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRKR 280
L G V L+ L V+ + I L ++KR
Sbjct: 199 LTGGTFWFVTGLFILFALTVVIFMAKKIWLE---RQKR 233
>sp|P54449|YQED_BACSU Uncharacterized protein YqeD OS=Bacillus subtilis (strain 168)
GN=yqeD PE=4 SV=1
Length = 208
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 129 MSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEK----LRFFQAEI 184
++ L GA+FG G+ + + + G FFL++ R W K Q+
Sbjct: 58 IAALNGAVFGTANGIWITLTGSMLGTILLFFLARYSFRD-----WARKKVQAYPAIQSYE 112
Query: 185 AKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAG 242
A + +L R+ P +P+L +N+ + + +H+FF A+LIG IP + AG
Sbjct: 113 ASFNKNAFTAVLLGRLIPVIPSLVMNVICGLSQVRWHVFFFASLIGKIPNIVVVTIAG 170
>sp|P67118|Y1528_MYCBO TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1
Length = 252
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 92 LKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNAT 151
L+D + +P+ F++ T + + F P T F +L AG LFG + G+ + V +T
Sbjct: 57 LRDWAKSLGAWFPLAFLL--VHTVVTVPPF--PRTAF-TLAAGLLFGSVVGVFIAVVGST 111
Query: 152 AGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINL 211
A A L + G L S + R + RE+ +L LR+ P +P IN
Sbjct: 112 ASAVIAMLLVRATGWQLNSLV---RRRAINRLDERLRERGWLAILSLRLIPVVPFAAINY 168
Query: 212 ASPIVDIPFHIFFLATLIGLIPASYITV 239
A+ + F ATL GL+P + V
Sbjct: 169 AAGASGVRILSFAWATLAGLLPGTAAVV 196
>sp|P67117|Y1491_MYCTU TVP38/TMEM64 family membrane protein Rv1491c/MT1538
OS=Mycobacterium tuberculosis GN=Rv1491c PE=3 SV=1
Length = 252
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 92 LKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNAT 151
L+D + +P+ F++ T + + F P T F +L AG LFG + G+ + V +T
Sbjct: 57 LRDWAKSLGAWFPLAFLL--VHTVVTVPPF--PRTAF-TLAAGLLFGSVVGVFIAVVGST 111
Query: 152 AGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINL 211
A A L + G L S + R + RE+ +L LR+ P +P IN
Sbjct: 112 ASAVIAMLLVRATGWQLNSLV---RRRAINRLDERLRERGWLAILSLRLIPVVPFAAINY 168
Query: 212 ASPIVDIPFHIFFLATLIGLIPASYITV 239
A+ + F ATL GL+P + V
Sbjct: 169 AAGASGVRILSFAWATLAGLLPGTAAVV 196
>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli
(strain K12) GN=ydjX PE=3 SV=2
Length = 236
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 111 YCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVS 170
Y +I ++PG+I + + G +FG + G +L + AT +S F L++ +GR L+
Sbjct: 51 YILLFIIATLLLLPGSILV-IAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLL 109
Query: 171 WFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIG 230
+ F E R +++++ R+ P P N A + I F + L + +
Sbjct: 110 KYVGHSNTFQAIEKGIARNG-IDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALT 168
Query: 231 LIPA 234
+P
Sbjct: 169 TLPG 172
>sp|P34943|NDUA9_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1
Length = 380
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 138 GVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLF 197
GV + + + NA +SS + SK +G V +PE AEI R ++ LNY
Sbjct: 160 GVEKFIHISHLNADIKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRFLNYFAN 219
Query: 198 LRITPSLPNLFINLASPIVDIPFHI 222
+R +P I+L V P +I
Sbjct: 220 IRWFGGVP--LISLGKKTVKQPVYI 242
>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=TVP38 PE=3 SV=1
Length = 383
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 103 YPVPFIIGYCSTYIFMQTFM-IPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLS 161
+ + F G T +FM F + G +S+LAG ++G + G IL+ + +G+ F +
Sbjct: 93 HGLKFGQGLLFTLVFMVGFPPLLGFSALSMLAGMVYGFVHGWILLACASISGSFCSFLVF 152
Query: 162 KLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINLA-SPIVDIPF 220
+ + +F R + L ++ LR+ P LP N A + I ++P
Sbjct: 153 RYLLHSRAERLMNSNKKFRAFSEILREDSSLFILVLLRLCP-LPYSLSNGALAAIPELPA 211
Query: 221 HIFFLATLIGLIPASYITVRAGLALGDL 248
+FLA+LI P I + G L +L
Sbjct: 212 TTYFLASLI-TSPKLMIHIFVGHKLKEL 238
>sp|P70172|NTCP2_MOUSE Ileal sodium/bile acid cotransporter OS=Mus musculus GN=Slc10a2
PE=2 SV=2
Length = 348
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 152 AGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEIAKRREKLLNYMLFLRITPSLPNLFINL 211
AG S FFL++L G+P W+ + R E + +L + ++ L +P NL
Sbjct: 236 AGYSLGFFLARLAGQP---WY---RCRTVALETGMQNTQLCSTIVQLSFSPEDLNLVFTF 289
Query: 212 ASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQ 249
P++ F + F A ++G+ Y+T R D +
Sbjct: 290 --PLIYTVFQLVFAAVILGI----YVTYRKCYGKNDAE 321
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.145 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,766,200
Number of Sequences: 539616
Number of extensions: 4088766
Number of successful extensions: 11634
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 11602
Number of HSP's gapped (non-prelim): 114
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)