BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023394
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 181 SVEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEE 233
S +R+ R+LRY +KK R F KTI+YA RK A++R R++GRFA+ ++ EE
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEE 334
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 184 ERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDQTV 237
ER+ R++RY +K+ R F KTI+YA RK A+ R R++GRFA+ + E + V
Sbjct: 294 EREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVV 347
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 184 ERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
ER+ R+LRY +KK R F+KTI+YA RK A+ R R++GRFA+
Sbjct: 277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 184 ERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEED 234
+R+ R+LRY +K+ R F KTI+YA RK A+ R R++GRFA+ E +D
Sbjct: 284 DREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDD 334
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 153 PATGENWGIQNNQMASMEDANVIKVGRYSVEERKDRILRYLKKKNQRNFNKTIKYACRKT 212
P E+ G+ +M + E V + S ER+ R+LRY +K+ R F KTI+YA RK
Sbjct: 202 PLVPESGGV-TAEMTNTETPAV----QLSPAEREARVLRYREKRKNRKFEKTIRYASRKA 256
Query: 213 LADRRVRVRGRFARNNELCEED 234
A+ R R++GRFA+ + E D
Sbjct: 257 YAEMRPRIKGRFAKRTDSREND 278
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 152 HPATGENWGIQNNQMASMEDANVIKVGRYSVEERKDRILRYLKKKNQRNFNKTIKYACRK 211
HP T + Q AS +I V + S +R+ R+LRY +K+ R F KTI+YA RK
Sbjct: 277 HPRTPKGTVEQQPDPASQ----MITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRK 332
Query: 212 TLADRRVRVRGRFARNNELCEE 233
A+ R RV GRFA+ EE
Sbjct: 333 AYAEIRPRVNGRFAKREIEAEE 354
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 180 YSVEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEL-CEEDQ 235
+S +R+ R+LRY +KK R F KTI+Y RK A+ R R++GRFA+ +++ E DQ
Sbjct: 321 FSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQIEVDQ 377
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 11/75 (14%)
Query: 161 IQNNQMASMEDA---------NVIKVGRYSVEERKDRILRYLKKKNQRNFNKTIKYACRK 211
+QN QM+ + + N ++V + ++ R++ +L++ +K+NQR F+K I+Y RK
Sbjct: 502 LQNGQMSMVHHSWSPAGNPPSNEVRVNK--LDRREEALLKFRRKRNQRCFDKKIRYVNRK 559
Query: 212 TLADRRVRVRGRFAR 226
LA+RR RV+G+F R
Sbjct: 560 RLAERRPRVKGQFVR 574
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 183 EERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNE 229
+ R D + RY +K+ R ++KTI+Y RK AD R+RVRGRF + +E
Sbjct: 383 QNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASE 429
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9
PE=2 SV=1
Length = 372
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 185 RKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNE 229
R + ++RY +KK R F+K ++YA RK AD R RV+GRF + E
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGE 359
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 183 EERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
+ R + LRY +KK +R+F K I+YA RK AD R RV+GRF +
Sbjct: 305 QARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVK 348
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 183 EERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
E R ++++ +K+ +RNF K ++Y RK LA++R RVRG+F R
Sbjct: 680 EHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR 723
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 183 EERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
E R ++++ +K+ +RNF K ++Y RK LA++R RVRG+F R
Sbjct: 680 EHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR 723
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 185 RKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNE 229
R + ++RY +KK R F+K ++Y RK AD R RV+GRF ++ E
Sbjct: 316 RNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGE 360
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7
PE=2 SV=1
Length = 392
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 184 ERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEL 230
ER+ R+LRY +K+ R F+K I+Y RK A++R R++GRF + L
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSL 390
>sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2
SV=2
Length = 297
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 179 RYSVEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFA 225
R SV +R +LR+ +K+ RNF+KTI+Y RK +A R R +G+F
Sbjct: 137 RLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFT 183
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 183 EERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
+ R + + RY +KK R ++KTI+Y RK A+ R+RV+GRF +
Sbjct: 355 QNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVK 398
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 182 VEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDQTVMKND 241
+ +R+ + ++ +K+ +R F K ++Y RK LA++R RVRG+F R +D + +
Sbjct: 666 ISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDDNDIKNIE 725
Query: 242 D 242
D
Sbjct: 726 D 726
>sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana
GN=CIA2 PE=2 SV=1
Length = 435
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 185 RKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
R+ +LRY +K+ R F+K I+Y RK AD+R R++GRF R
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVR 424
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana GN=COL8
PE=2 SV=2
Length = 319
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 184 ERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
ER+ R+ RY K+ R F K I+Y RK AD+R R++GRF R
Sbjct: 270 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 312
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 184 ERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
ER + RY +KK R + K I+Y RK A+ R R+RGRFA+
Sbjct: 286 ERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>sp|Q8H1G0|GAT28_ARATH GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2
SV=1
Length = 302
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 162 QNNQMASMEDANVIKVGRYSVEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVR 221
QNN+++S+ R+S+ +R ++R+ +K+ RNF+K I+Y RK +A R R +
Sbjct: 128 QNNRVSSLPGTPQ----RFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNK 183
Query: 222 GRF 224
G+F
Sbjct: 184 GQF 186
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 179 RYSVEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARN 227
R+S +R+ ++++ K+ R F+K ++Y RK LA++R RV+G+F R
Sbjct: 411 RWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRT 459
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 185 RKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDQTVMKND 241
R+ + ++ +K+ RNF K ++Y RK LA++R R+RG+F R + +EDQ D
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVR--QSGQEDQAGQDED 766
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 185 RKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDQTVMKND 241
R+ + ++ +K+ RNF K ++Y RK LA++R R+RG+F R + +EDQ D
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVR--QSGQEDQAGQDED 766
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6
PE=2 SV=2
Length = 406
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 185 RKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEL 230
R+ R+ RY +K+ R F+K I+Y RK A++R R++GRF + + +
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSSI 402
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 185 RKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
R+ R+ RY +K+ R F+K I+Y RK A++R R++GRF +
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 402
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 163 NNQMASMEDANVIKV---GRYSVEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVR 219
N+ +A E +NV+ G + +R+ + ++ K+ R F K ++Y RK LA++R R
Sbjct: 549 NHMIAPTESSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPR 608
Query: 220 VRGRFARNN 228
V+G+F R +
Sbjct: 609 VKGQFVRQD 617
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 183 EERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
E R + ++ K+ +R F+K ++Y RK LA+ R RVRG+F R
Sbjct: 441 ERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVR 484
>sp|Q6MUG5|SYS_MYCMS Serine--tRNA ligase OS=Mycoplasma mycoides subsp. mycoides SC
(strain PG1) GN=serS PE=3 SV=1
Length = 422
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 182 VEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRF--ARNNELCEEDQTVMK 239
+E+ D +++ L K+NQ+++++ +KYA K L +++ V+ +R N+L +E ++K
Sbjct: 7 IEQNLDEVIQILNKRNQQDYSEDLKYAVEKNLKRKQILVKSEALKSRKNQLSKEIGILIK 66
Query: 240 NDDNSH--KGKNPYCVDDDVQMKQDEEWL---QEAMASLMYLPYIA 280
+ N K K ++ +K DEE + + L Y+P ++
Sbjct: 67 DKKNEQADKAKAEVVSLNEQIIKLDEELRIVNDQILEKLSYIPNLS 112
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 199 RNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDQTVM 238
R F K I+YA RK AD R RV+GRF ++ E E D +++
Sbjct: 290 RMFGKQIRYASRKARADTRKRVKGRFVKSGETFEYDPSLV 329
>sp|Q2SR32|SYS_MYCCT Serine--tRNA ligase OS=Mycoplasma capricolum subsp. capricolum
(strain California kid / ATCC 27343 / NCTC 10154)
GN=serS PE=3 SV=1
Length = 422
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 182 VEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRF--ARNNELCEEDQTVMK 239
+E+ D +++ L K+NQ++++ +KY K L + + V+ +R N+L +E T++K
Sbjct: 7 IEQNLDEVIQRLNKRNQQDYSDDLKYVVSKNLKRKEILVKSEALKSRKNQLSKEIGTLLK 66
Query: 240 ND--DNSHKGKNPYCVDDDVQMKQDEEWL---QEAMASLMYLP 277
D S + K ++ +K DEE + + L+Y+P
Sbjct: 67 EKKVDQSEQAKIEVINLNEQIIKLDEELRVVNDQILEKLLYIP 109
>sp|Q9LRH6|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2
SV=2
Length = 309
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 179 RYSVEERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRF 224
R S+ +R + R+ KK+N R F K ++Y R+ +A R R +G+F
Sbjct: 140 RCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQF 185
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 170 EDANVIKVGRYSVE-ERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
ED + VG+ +R+ + ++ K+ R + K ++Y RK LA++R R++G+F R
Sbjct: 493 EDGYSLSVGKIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVR 550
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 184 ERKDRILRYLKKKNQRNFNKTIKYACRKTLADRRVRVRGRFAR 226
+R+ ++++ K+ +R F K ++Y RK LA++R V+G+F R
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIR 483
>sp|B2V6N0|LON_SULSY Lon protease OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=lon
PE=3 SV=1
Length = 800
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 119 NEIQNYGARFQLPSAACEFGDDCCAFMHDLKPMHPATGE--------NWGIQNNQMASME 170
EI+NY + + E ++ + L+ MHP + E +W ++ +
Sbjct: 257 EEIENYKKKIEESGMPDEIKEEALKQLKRLEKMHPDSAEAGVIRTYLDWLVELPWNKRTK 316
Query: 171 DANVIKVGR-------YSVEERKDRILRY---LKKKNQRNFNKTIK 206
D +K+ + Y +E+ K+RIL Y LK K + + +K+IK
Sbjct: 317 DRLDLKIAKKILDEDHYDLEKIKERILEYLAVLKLKKESSKDKSIK 362
>sp|O13476|LIPB_KLULA Octanoyltransferase, mitochondrial OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=LIPB PE=3 SV=1
Length = 332
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 98 GIYDSMVPTLAEYNGMAMCGTNEIQNYGARFQLPSAACEFGDDCCAFMHDLKPM 151
GI ++ P L+ N MCG +E + R Q+P ++ D AF++ L +
Sbjct: 260 GICINVDPDLSYMNSFTMCGLSEKKATSIREQVPDSSTSVNDVAVAFVNQLAKL 313
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,378,626
Number of Sequences: 539616
Number of extensions: 4629417
Number of successful extensions: 11715
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 11671
Number of HSP's gapped (non-prelim): 50
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)