Query 023401
Match_columns 282
No_of_seqs 51 out of 53
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 06:11:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023401.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023401hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 98.6 1.3E-07 4.4E-12 83.8 8.8 191 73-280 1-261 (439)
2 3okp_A GDP-mannose-dependent a 98.6 7.5E-08 2.6E-12 84.3 7.2 180 72-279 2-207 (394)
3 3c48_A Predicted glycosyltrans 98.3 6.6E-07 2.3E-11 80.3 6.6 178 75-279 21-252 (438)
4 2x6q_A Trehalose-synthase TRET 98.3 2.7E-06 9.2E-11 76.3 8.8 109 70-188 36-158 (416)
5 2r60_A Glycosyl transferase, g 98.1 9.5E-07 3.2E-11 81.7 2.6 184 75-279 8-271 (499)
6 2iuy_A Avigt4, glycosyltransfe 98.0 1.1E-05 3.9E-10 70.3 7.6 119 72-219 1-136 (342)
7 1rzu_A Glycogen synthase 1; gl 98.0 6.7E-06 2.3E-10 75.4 5.6 40 75-114 1-44 (485)
8 2qzs_A Glycogen synthase; glyc 97.9 2.3E-05 8E-10 71.8 7.9 40 75-114 1-44 (485)
9 2iw1_A Lipopolysaccharide core 97.9 2.8E-06 9.7E-11 73.9 1.3 173 76-279 2-205 (374)
10 2gek_A Phosphatidylinositol ma 97.6 0.00024 8.1E-09 62.5 9.8 134 75-222 21-180 (406)
11 2jjm_A Glycosyl transferase, g 97.6 0.00011 3.7E-09 65.3 7.3 166 85-279 25-220 (394)
12 3oy2_A Glycosyltransferase B73 97.3 0.0031 1E-07 56.2 12.4 175 75-279 1-193 (413)
13 1f0k_A MURG, UDP-N-acetylgluco 97.1 0.0072 2.5E-07 52.7 13.1 39 75-115 7-45 (364)
14 1vgv_A UDP-N-acetylglucosamine 95.1 0.77 2.6E-05 40.1 14.8 34 75-111 1-35 (384)
15 3s2u_A UDP-N-acetylglucosamine 93.6 0.52 1.8E-05 42.7 10.7 40 72-115 1-41 (365)
16 3otg_A CALG1; calicheamicin, T 93.5 0.42 1.4E-05 42.3 9.7 51 75-137 21-71 (412)
17 4fzr_A SSFS6; structural genom 93.0 0.46 1.6E-05 42.3 9.2 50 76-137 17-66 (398)
18 3ia7_A CALG4; glycosysltransfe 92.5 0.57 2E-05 41.0 9.0 51 75-137 5-55 (402)
19 3e8x_A Putative NAD-dependent 92.4 0.28 9.7E-06 40.7 6.6 89 58-161 5-95 (236)
20 3tsa_A SPNG, NDP-rhamnosyltran 91.7 0.92 3.1E-05 40.0 9.4 53 75-139 2-54 (391)
21 3beo_A UDP-N-acetylglucosamine 91.5 1.1 3.8E-05 38.8 9.5 38 73-113 7-46 (375)
22 1qgu_B Protein (nitrogenase mo 91.2 0.99 3.4E-05 44.1 9.9 86 69-166 355-448 (519)
23 3oti_A CALG3; calicheamicin, T 90.8 1.3 4.4E-05 39.5 9.5 36 75-112 21-56 (398)
24 3klj_A NAD(FAD)-dependent dehy 89.6 0.65 2.2E-05 42.7 6.7 81 74-161 146-230 (385)
25 3vue_A GBSS-I, granule-bound s 88.4 4.5 0.00015 39.1 12.0 38 74-111 9-50 (536)
26 3aek_A Light-independent proto 88.2 0.94 3.2E-05 43.0 7.0 97 69-186 302-404 (437)
27 3rsc_A CALG2; TDP, enediyne, s 88.0 2.3 7.8E-05 37.8 8.9 51 75-137 21-71 (415)
28 2vsy_A XCC0866; transferase, g 87.8 2.7 9.3E-05 39.1 9.7 80 73-158 204-290 (568)
29 2bw0_A 10-FTHFDH, 10-formyltet 87.6 2.7 9.1E-05 38.9 9.4 79 70-157 18-106 (329)
30 2xdq_A Light-independent proto 87.5 0.98 3.3E-05 42.7 6.6 110 69-194 312-429 (460)
31 3u7q_B Nitrogenase molybdenum- 87.4 2.6 9E-05 41.3 9.8 86 70-166 360-452 (523)
32 3dfz_A SIRC, precorrin-2 dehyd 87.0 1.2 4.2E-05 39.3 6.5 72 72-160 29-101 (223)
33 3lk7_A UDP-N-acetylmuramoylala 86.7 2.6 9E-05 39.7 9.0 88 72-173 7-97 (451)
34 1mio_B Nitrogenase molybdenum 86.7 3 0.0001 39.8 9.4 86 70-166 308-399 (458)
35 3czc_A RMPB; alpha/beta sandwi 86.6 1.1 3.9E-05 34.8 5.5 73 81-161 2-78 (110)
36 3g1w_A Sugar ABC transporter; 86.0 4.2 0.00014 34.3 9.1 90 73-186 3-95 (305)
37 3lqk_A Dipicolinate synthase s 85.8 3.3 0.00011 36.0 8.6 112 72-194 5-140 (201)
38 3aek_B Light-independent proto 85.7 2.4 8.3E-05 41.4 8.5 79 70-159 276-358 (525)
39 2hy7_A Glucuronosyltransferase 85.0 3.6 0.00012 37.5 8.8 36 74-111 14-50 (406)
40 3u7q_A Nitrogenase molybdenum- 84.6 2.4 8.2E-05 41.2 7.8 82 70-166 344-431 (492)
41 3hn7_A UDP-N-acetylmuramate-L- 84.5 4.9 0.00017 38.9 9.9 89 70-173 15-105 (524)
42 3pdi_A Nitrogenase MOFE cofact 84.0 0.92 3.2E-05 43.9 4.6 86 69-166 327-415 (483)
43 3lxd_A FAD-dependent pyridine 82.2 2.6 9E-05 38.3 6.6 81 74-161 152-250 (415)
44 2p1z_A Phosphoribosyltransfera 81.7 2.8 9.7E-05 34.9 6.1 59 70-138 110-170 (180)
45 3s28_A Sucrose synthase 1; gly 81.6 1.1 3.9E-05 46.3 4.4 42 74-115 278-342 (816)
46 2xdq_B Light-independent proto 81.5 3.8 0.00013 39.6 7.8 79 70-159 299-381 (511)
47 2wns_A Orotate phosphoribosylt 81.2 3 0.0001 35.5 6.3 59 70-139 107-168 (205)
48 3mjd_A Orotate phosphoribosylt 80.9 3.9 0.00013 36.3 7.1 66 71-139 133-201 (232)
49 3eag_A UDP-N-acetylmuramate:L- 80.9 5.8 0.0002 35.7 8.3 85 74-173 4-91 (326)
50 1xhc_A NADH oxidase /nitrite r 80.3 2 6.9E-05 38.9 5.1 81 73-161 142-233 (367)
51 1id1_A Putative potassium chan 79.7 2.4 8.3E-05 33.3 4.8 76 72-159 1-80 (153)
52 2iyf_A OLED, oleandomycin glyc 79.6 2 6.7E-05 38.5 4.8 40 72-113 5-44 (430)
53 3ef6_A Toluene 1,2-dioxygenase 79.2 2.4 8.3E-05 38.7 5.3 88 73-167 142-248 (410)
54 2dy0_A APRT, adenine phosphori 79.0 3.4 0.00012 34.5 5.8 58 71-138 123-183 (190)
55 4eqs_A Coenzyme A disulfide re 78.5 3.3 0.00011 38.5 6.1 80 74-160 147-238 (437)
56 3fg2_P Putative rubredoxin red 78.3 3.6 0.00012 37.3 6.2 88 73-167 141-248 (404)
57 2aee_A OPRT, oprtase, orotate 78.3 4.9 0.00017 34.1 6.7 60 71-139 114-175 (211)
58 3lad_A Dihydrolipoamide dehydr 78.3 3.3 0.00011 38.4 6.0 80 74-160 180-278 (476)
59 3ics_A Coenzyme A-disulfide re 78.3 3.6 0.00012 39.4 6.4 82 73-161 186-281 (588)
60 2x0d_A WSAF; GT4 family, trans 78.2 1.3 4.5E-05 41.0 3.3 42 73-114 45-89 (413)
61 3ntd_A FAD-dependent pyridine 77.6 3.8 0.00013 38.6 6.3 60 73-139 150-212 (565)
62 1v4v_A UDP-N-acetylglucosamine 76.3 9.9 0.00034 33.1 8.2 35 75-112 6-41 (376)
63 2bc0_A NADH oxidase; flavoprot 76.2 7.7 0.00026 36.3 7.9 82 73-161 193-290 (490)
64 2yzk_A OPRT, oprtase, orotate 75.9 6.1 0.00021 32.7 6.4 58 72-139 104-163 (178)
65 2ps1_A Orotate phosphoribosylt 75.8 5.4 0.00018 34.4 6.3 66 71-139 122-193 (226)
66 3q0i_A Methionyl-tRNA formyltr 75.7 10 0.00035 34.9 8.5 79 72-157 5-92 (318)
67 2lta_A De novo designed protei 76.8 0.61 2.1E-05 37.0 0.0 49 72-132 1-49 (110)
68 2ffh_A Protein (FFH); SRP54, s 74.3 21 0.00073 34.1 10.6 91 67-161 91-191 (425)
69 1lh0_A OMP synthase; loop clos 73.9 8.7 0.0003 32.9 7.1 64 71-139 115-181 (213)
70 4hv4_A UDP-N-acetylmuramate--L 73.9 12 0.0004 35.9 8.7 84 73-173 21-106 (494)
71 3slg_A PBGP3 protein; structur 73.7 6.9 0.00024 34.4 6.5 86 61-161 11-102 (372)
72 4dzz_A Plasmid partitioning pr 73.6 26 0.00089 27.8 9.5 78 76-160 2-85 (206)
73 1mvl_A PPC decarboxylase athal 73.6 4.6 0.00016 35.4 5.3 75 72-156 17-102 (209)
74 1trb_A Thioredoxin reductase; 73.0 9.7 0.00033 32.3 7.1 61 72-139 143-204 (320)
75 3l7i_A Teichoic acid biosynthe 72.8 6.3 0.00022 39.1 6.7 170 72-276 350-544 (729)
76 3h4t_A Glycosyltransferase GTF 72.7 21 0.0007 32.2 9.6 50 76-137 2-51 (404)
77 2gqw_A Ferredoxin reductase; f 72.5 12 0.00041 34.1 8.0 89 73-168 144-247 (408)
78 2cdu_A NADPH oxidase; flavoenz 72.4 12 0.00043 34.3 8.2 82 73-161 148-246 (452)
79 2q1w_A Putative nucleotide sug 72.1 6.3 0.00021 34.4 5.8 45 63-113 10-54 (333)
80 1vl8_A Gluconate 5-dehydrogena 71.8 15 0.00051 31.4 8.1 50 57-112 4-53 (267)
81 1y0b_A Xanthine phosphoribosyl 71.7 9.2 0.00032 31.7 6.6 58 71-137 117-176 (197)
82 3ezl_A Acetoacetyl-COA reducta 71.2 17 0.00057 30.4 8.1 87 65-161 4-102 (256)
83 3m3h_A OPRT, oprtase, orotate 71.2 7.8 0.00027 34.3 6.3 60 70-139 133-195 (234)
84 2gk4_A Conserved hypothetical 70.8 4.7 0.00016 35.9 4.8 60 92-161 31-95 (232)
85 3dm5_A SRP54, signal recogniti 70.2 22 0.00076 34.3 9.7 84 73-160 99-192 (443)
86 1u9y_A RPPK;, ribose-phosphate 69.9 5.4 0.00019 36.0 5.1 38 71-111 202-239 (284)
87 3l6u_A ABC-type sugar transpor 69.8 31 0.0011 28.6 9.5 89 73-186 7-98 (293)
88 3c85_A Putative glutathione-re 69.7 4 0.00014 32.8 3.8 72 72-159 37-114 (183)
89 3i6i_A Putative leucoanthocyan 69.6 26 0.0009 30.5 9.3 81 72-160 8-93 (346)
90 1nhp_A NADH peroxidase; oxidor 69.1 13 0.00045 34.1 7.6 82 73-161 148-245 (447)
91 3pdi_B Nitrogenase MOFE cofact 69.0 4.9 0.00017 38.5 4.8 79 70-166 309-389 (458)
92 2zbw_A Thioredoxin reductase; 68.6 13 0.00045 31.8 7.0 61 72-139 150-211 (335)
93 3qjg_A Epidermin biosynthesis 68.3 14 0.00047 31.4 7.0 75 74-157 5-83 (175)
94 3rhz_A GTF3, nucleotide sugar 68.3 37 0.0013 30.9 10.3 119 77-220 14-151 (339)
95 2gn4_A FLAA1 protein, UDP-GLCN 68.1 9.3 0.00032 34.0 6.2 85 66-161 13-102 (344)
96 3o0h_A Glutathione reductase; 68.0 7.4 0.00025 36.3 5.7 80 74-160 191-286 (484)
97 1q1r_A Putidaredoxin reductase 67.8 14 0.00048 34.0 7.5 88 73-167 148-257 (431)
98 1ebd_A E3BD, dihydrolipoamide 67.5 18 0.00061 33.3 8.1 59 74-139 170-231 (455)
99 1pjq_A CYSG, siroheme synthase 67.3 16 0.00053 34.8 7.9 73 72-161 10-83 (457)
100 3cgb_A Pyridine nucleotide-dis 67.3 13 0.00045 34.7 7.2 82 73-161 185-281 (480)
101 3dez_A OPRT, oprtase, orotate 67.2 12 0.00041 33.3 6.7 61 70-139 145-207 (243)
102 1l1q_A Adenine phosphoribosylt 66.8 7.1 0.00024 32.4 4.8 32 72-106 115-146 (186)
103 1wd5_A Hypothetical protein TT 66.8 16 0.00054 30.7 7.1 39 70-111 116-154 (208)
104 1v59_A Dihydrolipoamide dehydr 66.5 16 0.00055 33.7 7.6 59 74-139 183-244 (478)
105 3n2l_A OPRT, oprtase, orotate 66.3 15 0.00051 32.7 7.1 63 71-139 140-206 (238)
106 3iwa_A FAD-dependent pyridine 66.1 7.7 0.00026 35.9 5.4 81 74-161 159-257 (472)
107 3itj_A Thioredoxin reductase 1 66.0 16 0.00056 30.9 7.0 59 71-139 170-229 (338)
108 2v3a_A Rubredoxin reductase; a 65.9 19 0.00066 32.2 7.8 81 74-161 145-242 (384)
109 1d1q_A Tyrosine phosphatase (E 65.8 10 0.00035 31.2 5.5 92 73-168 6-105 (161)
110 3fbs_A Oxidoreductase; structu 65.8 13 0.00044 30.9 6.2 55 72-138 139-193 (297)
111 2hq1_A Glucose/ribitol dehydro 65.7 28 0.00097 28.5 8.3 80 72-161 3-94 (247)
112 2p6p_A Glycosyl transferase; X 65.7 9.7 0.00033 33.4 5.7 35 76-112 2-36 (384)
113 1zn8_A APRT, adenine phosphori 65.6 7.5 0.00026 31.8 4.7 35 71-108 117-151 (180)
114 1dku_A Protein (phosphoribosyl 65.4 7.1 0.00024 35.9 5.0 42 71-115 214-255 (317)
115 3av3_A Phosphoribosylglycinami 65.3 25 0.00085 30.3 8.2 75 88-168 12-103 (212)
116 2px0_A Flagellar biosynthesis 65.3 41 0.0014 30.0 9.9 84 73-160 104-192 (296)
117 3jy6_A Transcriptional regulat 65.3 46 0.0016 27.6 9.6 41 73-113 6-46 (276)
118 1onf_A GR, grase, glutathione 65.1 17 0.00059 34.1 7.6 81 74-161 176-274 (500)
119 2eq6_A Pyruvate dehydrogenase 65.0 18 0.00061 33.6 7.7 59 74-139 169-230 (464)
120 2a8x_A Dihydrolipoyl dehydroge 64.9 17 0.00059 33.5 7.5 59 74-139 171-232 (464)
121 3n8i_A Low molecular weight ph 64.9 16 0.00056 30.1 6.7 94 72-169 3-103 (157)
122 3m9w_A D-xylose-binding peripl 64.9 63 0.0022 27.3 10.6 40 73-112 1-40 (313)
123 2r9z_A Glutathione amide reduc 64.8 17 0.0006 33.7 7.6 80 74-160 166-262 (463)
124 3l49_A ABC sugar (ribose) tran 64.7 48 0.0016 27.4 9.6 41 73-113 4-44 (291)
125 2iya_A OLEI, oleandomycin glyc 64.7 9.5 0.00033 34.1 5.6 39 72-112 10-48 (424)
126 1ges_A Glutathione reductase; 64.5 17 0.0006 33.5 7.5 80 74-160 167-263 (450)
127 1vch_A Phosphoribosyltransfera 64.5 7.6 0.00026 31.5 4.5 34 72-108 118-151 (175)
128 1zmd_A Dihydrolipoyl dehydroge 64.3 18 0.00063 33.4 7.6 59 74-139 178-240 (474)
129 3ab1_A Ferredoxin--NADP reduct 64.1 14 0.00048 32.2 6.4 61 72-139 161-222 (360)
130 3mcu_A Dipicolinate synthase, 64.1 6.5 0.00022 34.4 4.2 114 72-193 3-137 (207)
131 1j8m_F SRP54, signal recogniti 64.1 50 0.0017 29.5 10.2 85 73-161 97-191 (297)
132 3k30_A Histamine dehydrogenase 64.0 10 0.00034 37.5 6.0 85 71-160 520-622 (690)
133 3r9u_A Thioredoxin reductase; 64.0 18 0.00061 30.3 6.8 58 72-139 145-203 (315)
134 2ywr_A Phosphoribosylglycinami 63.9 25 0.00085 30.4 7.9 64 88-157 10-87 (216)
135 3ouz_A Biotin carboxylase; str 63.8 25 0.00086 32.4 8.4 37 70-113 2-38 (446)
136 3afn_B Carbonyl reductase; alp 63.7 39 0.0013 27.7 8.8 79 72-160 5-95 (258)
137 2j37_W Signal recognition part 63.6 46 0.0016 32.5 10.6 86 73-162 100-195 (504)
138 1vma_A Cell division protein F 63.6 58 0.002 29.4 10.6 90 68-161 96-197 (306)
139 1hdo_A Biliverdin IX beta redu 63.6 11 0.00036 29.7 5.1 74 72-160 1-77 (206)
140 2xxa_A Signal recognition part 63.3 38 0.0013 32.1 9.8 89 68-160 92-193 (433)
141 2q0l_A TRXR, thioredoxin reduc 62.8 19 0.00066 30.4 6.9 58 72-139 141-199 (311)
142 1jkx_A GART;, phosphoribosylgl 62.8 43 0.0015 28.9 9.2 81 75-167 2-99 (212)
143 3ek2_A Enoyl-(acyl-carrier-pro 62.6 17 0.00057 30.4 6.4 45 65-113 5-49 (271)
144 1vdm_A Purine phosphoribosyltr 62.5 8.7 0.0003 30.4 4.4 35 71-108 80-114 (153)
145 2hmt_A YUAA protein; RCK, KTN, 62.4 4.9 0.00017 30.0 2.8 72 73-160 5-80 (144)
146 4huj_A Uncharacterized protein 62.3 24 0.00081 29.6 7.3 83 68-170 17-99 (220)
147 3kkl_A Probable chaperone prot 62.1 10 0.00036 33.2 5.2 43 74-116 3-54 (244)
148 3oc4_A Oxidoreductase, pyridin 62.1 22 0.00074 32.7 7.6 81 73-160 146-242 (452)
149 1u7z_A Coenzyme A biosynthesis 62.1 15 0.00051 32.5 6.2 58 92-161 36-98 (226)
150 1zu4_A FTSY; GTPase, signal re 62.0 40 0.0014 30.5 9.2 91 68-163 97-204 (320)
151 3dk9_A Grase, GR, glutathione 62.0 21 0.00072 33.0 7.5 59 74-139 187-248 (478)
152 3tqq_A Methionyl-tRNA formyltr 61.8 22 0.00076 32.5 7.6 76 75-157 3-87 (314)
153 1lvl_A Dihydrolipoamide dehydr 61.7 16 0.00055 33.8 6.7 59 74-139 171-232 (458)
154 1xg5_A ARPG836; short chain de 61.7 32 0.0011 29.2 8.1 83 67-160 25-121 (279)
155 3dgz_A Thioredoxin reductase 2 61.7 21 0.00073 33.2 7.5 59 74-139 185-245 (488)
156 3auf_A Glycinamide ribonucleot 61.6 31 0.001 30.3 8.1 73 88-166 31-120 (229)
157 2hqm_A GR, grase, glutathione 61.5 21 0.00072 33.3 7.5 59 74-139 185-246 (479)
158 3uug_A Multiple sugar-binding 61.4 68 0.0023 27.1 10.1 89 73-186 2-93 (330)
159 1ls1_A Signal recognition part 61.4 69 0.0023 28.4 10.5 89 67-159 91-189 (295)
160 3o74_A Fructose transport syst 61.4 64 0.0022 26.3 9.6 18 150-167 96-113 (272)
161 2c07_A 3-oxoacyl-(acyl-carrier 61.2 27 0.00091 29.9 7.6 83 68-161 38-132 (285)
162 4amg_A Snogd; transferase, pol 61.2 6.1 0.00021 34.6 3.5 41 70-112 18-58 (400)
163 3s5j_B Ribose-phosphate pyroph 61.1 9.5 0.00032 35.6 5.0 40 70-112 209-248 (326)
164 1mo9_A ORF3; nucleotide bindin 61.0 22 0.00076 33.6 7.6 59 74-139 214-275 (523)
165 2l82_A Designed protein OR32; 60.1 72 0.0025 26.6 9.6 82 88-172 10-99 (162)
166 3cty_A Thioredoxin reductase; 59.8 24 0.00083 30.0 7.0 58 72-139 153-210 (319)
167 1zk7_A HGII, reductase, mercur 59.4 26 0.00089 32.3 7.6 80 74-160 176-269 (467)
168 2qae_A Lipoamide, dihydrolipoy 59.3 26 0.00088 32.3 7.6 59 74-139 174-236 (468)
169 3ruf_A WBGU; rossmann fold, UD 59.0 51 0.0017 28.4 9.0 79 71-160 22-110 (351)
170 2g1u_A Hypothetical protein TM 58.9 11 0.00039 29.5 4.5 74 71-160 16-94 (155)
171 3dah_A Ribose-phosphate pyroph 58.9 8.7 0.0003 35.7 4.3 39 71-112 213-251 (319)
172 2yqu_A 2-oxoglutarate dehydrog 58.7 26 0.00088 32.2 7.5 81 74-161 167-263 (455)
173 1dxl_A Dihydrolipoamide dehydr 58.4 17 0.00057 33.4 6.1 59 74-139 177-238 (470)
174 1fl2_A Alkyl hydroperoxide red 57.9 24 0.00082 29.8 6.6 57 73-139 143-200 (310)
175 4fk1_A Putative thioredoxin re 57.7 22 0.00074 30.5 6.4 57 72-139 144-200 (304)
176 3gem_A Short chain dehydrogena 57.5 35 0.0012 29.2 7.6 76 72-161 25-110 (260)
177 3urh_A Dihydrolipoyl dehydroge 57.5 22 0.00077 33.0 6.9 59 74-139 198-259 (491)
178 3kd9_A Coenzyme A disulfide re 57.4 16 0.00055 33.5 5.9 81 73-161 147-243 (449)
179 2pzm_A Putative nucleotide sug 57.3 40 0.0014 29.2 8.1 85 64-161 10-99 (330)
180 3ctm_A Carbonyl reductase; alc 57.3 82 0.0028 26.4 9.9 79 72-161 32-122 (279)
181 2x5o_A UDP-N-acetylmuramoylala 57.2 7.7 0.00026 36.3 3.7 72 73-161 4-75 (439)
182 1ja9_A 4HNR, 1,3,6,8-tetrahydr 57.0 19 0.00065 30.0 5.8 80 71-160 18-109 (274)
183 3k31_A Enoyl-(acyl-carrier-pro 56.9 33 0.0011 29.8 7.5 49 61-113 17-65 (296)
184 2o23_A HADH2 protein; HSD17B10 56.5 68 0.0023 26.5 9.1 36 72-113 10-45 (265)
185 3gbv_A Putative LACI-family tr 56.5 83 0.0029 26.0 9.7 39 73-111 7-47 (304)
186 3pxx_A Carveol dehydrogenase; 56.4 89 0.003 26.2 10.6 88 68-161 4-110 (287)
187 2q7v_A Thioredoxin reductase; 56.3 27 0.00091 29.9 6.7 57 73-139 151-208 (325)
188 1ojt_A Surface protein; redox- 56.3 19 0.00064 33.6 6.1 59 74-139 185-246 (482)
189 1yb1_A 17-beta-hydroxysteroid 56.2 44 0.0015 28.3 8.0 80 71-161 28-119 (272)
190 3f8d_A Thioredoxin reductase ( 56.2 24 0.00083 29.5 6.3 60 70-139 150-210 (323)
191 3fwz_A Inner membrane protein 56.2 33 0.0011 26.4 6.7 70 75-160 8-81 (140)
192 3e61_A Putative transcriptiona 55.8 82 0.0028 25.9 9.5 40 73-112 7-46 (277)
193 2x8g_A Thioredoxin glutathione 55.5 30 0.001 33.1 7.6 59 74-139 286-346 (598)
194 2wpf_A Trypanothione reductase 55.5 29 0.00098 32.7 7.3 80 74-160 191-290 (495)
195 3dgh_A TRXR-1, thioredoxin red 55.5 40 0.0014 31.2 8.2 59 74-139 187-247 (483)
196 3tb6_A Arabinose metabolism tr 55.2 65 0.0022 26.6 8.7 40 74-113 15-54 (298)
197 4gi5_A Quinone reductase; prot 54.8 24 0.00083 31.9 6.5 104 68-173 16-143 (280)
198 3gk3_A Acetoacetyl-COA reducta 54.8 42 0.0014 28.4 7.7 86 66-161 17-114 (269)
199 2v3c_C SRP54, signal recogniti 54.7 32 0.0011 32.7 7.5 84 75-162 100-192 (432)
200 1g2q_A Adenine phosphoribosylt 54.6 14 0.0005 30.5 4.6 35 71-108 119-153 (187)
201 1mio_A Nitrogenase molybdenum 54.6 32 0.0011 33.7 7.7 39 70-115 331-369 (533)
202 3f9i_A 3-oxoacyl-[acyl-carrier 54.2 29 0.00098 28.8 6.4 84 66-161 6-95 (249)
203 3awd_A GOX2181, putative polyo 54.0 49 0.0017 27.3 7.8 79 72-161 11-101 (260)
204 3rfo_A Methionyl-tRNA formyltr 54.0 29 0.00098 31.9 6.9 85 75-166 5-101 (317)
205 2wm3_A NMRA-like family domain 53.9 70 0.0024 27.0 8.9 74 74-160 5-82 (299)
206 2yjn_A ERYCIII, glycosyltransf 53.8 12 0.00043 33.8 4.4 37 74-112 20-56 (441)
207 3ijr_A Oxidoreductase, short c 53.7 1E+02 0.0034 26.6 10.0 82 70-161 43-136 (291)
208 3gdg_A Probable NADP-dependent 53.5 25 0.00087 29.4 6.0 40 72-115 18-57 (267)
209 3rot_A ABC sugar transporter, 53.0 53 0.0018 27.6 8.0 92 72-187 1-96 (297)
210 2f00_A UDP-N-acetylmuramate--L 52.9 42 0.0014 31.8 8.1 72 73-161 18-89 (491)
211 1qb7_A APRT, adenine phosphori 52.6 16 0.00055 31.8 4.7 35 71-108 135-169 (236)
212 1lu9_A Methylene tetrahydromet 52.0 42 0.0014 29.1 7.4 79 72-161 117-199 (287)
213 4e4t_A Phosphoribosylaminoimid 51.8 32 0.0011 32.0 7.0 34 71-111 32-65 (419)
214 1jx7_A Hypothetical protein YC 51.4 45 0.0015 24.6 6.5 65 75-139 3-78 (117)
215 3kl4_A SRP54, signal recogniti 51.3 68 0.0023 30.7 9.3 85 73-161 96-190 (433)
216 1qyd_A Pinoresinol-lariciresin 51.2 86 0.0029 26.4 9.0 79 75-160 5-86 (313)
217 3dlo_A Universal stress protei 51.2 57 0.0019 25.3 7.4 93 66-159 16-126 (155)
218 3lzw_A Ferredoxin--NADP reduct 51.1 44 0.0015 28.1 7.2 59 71-139 151-209 (332)
219 1j6u_A UDP-N-acetylmuramate-al 51.1 27 0.00092 33.1 6.4 65 94-169 26-92 (469)
220 4etn_A LMPTP, low molecular we 51.0 33 0.0011 29.1 6.4 88 75-166 35-126 (184)
221 3sho_A Transcriptional regulat 51.0 25 0.00084 28.1 5.3 38 74-115 88-125 (187)
222 4iin_A 3-ketoacyl-acyl carrier 51.0 91 0.0031 26.3 9.2 80 72-161 27-118 (271)
223 3l9w_A Glutathione-regulated p 50.9 19 0.00066 33.9 5.4 69 75-159 5-77 (413)
224 1sny_A Sniffer CG10964-PA; alp 50.6 42 0.0014 27.9 6.9 42 66-113 13-57 (267)
225 1p3d_A UDP-N-acetylmuramate--a 50.6 44 0.0015 31.4 7.8 72 73-161 17-88 (475)
226 3qfa_A Thioredoxin reductase 1 50.5 38 0.0013 32.0 7.4 59 74-139 210-270 (519)
227 2wsb_A Galactitol dehydrogenas 50.4 58 0.002 26.7 7.7 35 72-112 9-43 (254)
228 2ew8_A (S)-1-phenylethanol deh 50.3 77 0.0026 26.4 8.5 77 72-161 5-93 (249)
229 3o38_A Short chain dehydrogena 50.3 72 0.0025 26.6 8.4 82 68-161 16-112 (266)
230 4id9_A Short-chain dehydrogena 50.1 60 0.0021 27.9 8.0 74 66-160 11-87 (347)
231 1hgx_A HGXPRTASE, hypoxanthine 49.8 18 0.00062 29.7 4.4 35 71-108 92-126 (183)
232 3icc_A Putative 3-oxoacyl-(acy 49.8 58 0.002 26.8 7.6 38 72-115 5-42 (255)
233 4dna_A Probable glutathione re 49.1 48 0.0017 30.5 7.7 59 74-139 170-231 (463)
234 2gas_A Isoflavone reductase; N 48.7 1.1E+02 0.0036 25.8 9.2 80 74-160 2-86 (307)
235 1fmc_A 7 alpha-hydroxysteroid 48.7 49 0.0017 27.1 7.0 79 72-161 9-99 (255)
236 3sc4_A Short chain dehydrogena 48.4 1.2E+02 0.0041 26.0 9.7 83 72-161 7-104 (285)
237 2ji4_A Phosphoribosyl pyrophos 48.1 22 0.00074 33.6 5.2 40 70-112 268-307 (379)
238 2geb_A Hypoxanthine-guanine ph 48.1 20 0.00068 29.7 4.4 35 71-108 95-129 (185)
239 1meo_A Phosophoribosylglycinam 48.0 85 0.0029 27.0 8.6 81 75-167 2-99 (209)
240 3d1c_A Flavin-containing putat 47.8 40 0.0014 29.1 6.5 60 73-139 165-235 (369)
241 1jzt_A Hypothetical 27.5 kDa p 47.7 28 0.00097 30.7 5.6 78 75-156 59-138 (246)
242 3loq_A Universal stress protei 47.5 1.2E+02 0.004 25.7 9.4 85 73-159 169-260 (294)
243 1xdi_A RV3303C-LPDA; reductase 47.5 40 0.0014 31.4 6.9 80 74-160 182-277 (499)
244 1yfz_A Hypoxanthine-guanine ph 47.3 20 0.00069 30.1 4.4 35 71-108 115-149 (205)
245 3osu_A 3-oxoacyl-[acyl-carrier 47.3 64 0.0022 26.8 7.6 67 91-161 15-93 (246)
246 4ds3_A Phosphoribosylglycinami 47.2 96 0.0033 26.9 8.8 74 72-157 5-93 (209)
247 1vdc_A NTR, NADPH dependent th 47.1 36 0.0012 29.0 6.1 58 72-139 157-215 (333)
248 4ep1_A Otcase, ornithine carba 46.8 65 0.0022 30.3 8.2 81 72-160 177-257 (340)
249 3lrt_A Ribose-phosphate pyroph 46.8 26 0.00088 31.9 5.3 39 71-112 200-238 (286)
250 1fec_A Trypanothione reductase 46.7 45 0.0015 31.3 7.1 80 74-160 187-286 (490)
251 3llv_A Exopolyphosphatase-rela 46.5 53 0.0018 24.8 6.4 71 73-159 5-79 (141)
252 1cyd_A Carbonyl reductase; sho 46.4 85 0.0029 25.5 8.0 74 72-160 5-86 (244)
253 3oid_A Enoyl-[acyl-carrier-pro 46.4 53 0.0018 27.8 7.0 65 92-160 16-92 (258)
254 3h75_A Periplasmic sugar-bindi 46.3 85 0.0029 27.1 8.4 41 72-112 1-42 (350)
255 1kyq_A Met8P, siroheme biosynt 46.2 14 0.00048 33.4 3.5 34 72-112 11-44 (274)
256 1a3c_A PYRR, pyrimidine operon 46.2 17 0.00058 29.6 3.7 32 72-106 96-128 (181)
257 1jl3_A Arsenate reductase; alp 46.1 27 0.00092 27.8 4.8 78 72-158 1-82 (139)
258 1g0o_A Trihydroxynaphthalene r 45.9 1.4E+02 0.0047 25.3 10.4 81 71-161 26-118 (283)
259 1f0k_A MURG, UDP-N-acetylgluco 45.4 1.1E+02 0.0037 26.1 8.8 94 76-183 185-280 (364)
260 3ic5_A Putative saccharopine d 45.3 72 0.0025 22.6 6.7 70 74-159 5-78 (118)
261 2q2v_A Beta-D-hydroxybutyrate 45.3 82 0.0028 26.3 7.9 76 72-160 2-89 (255)
262 3egc_A Putative ribose operon 45.2 1.3E+02 0.0045 24.9 9.4 40 73-112 7-46 (291)
263 2a87_A TRXR, TR, thioredoxin r 45.1 51 0.0017 28.4 6.8 57 73-139 154-211 (335)
264 3d02_A Putative LACI-type tran 45.0 97 0.0033 25.7 8.3 39 73-111 3-41 (303)
265 1ulz_A Pyruvate carboxylase N- 45.0 33 0.0011 31.5 5.8 31 75-112 3-33 (451)
266 1tk9_A Phosphoheptose isomeras 44.7 38 0.0013 27.0 5.5 39 73-115 110-148 (188)
267 3tjr_A Short chain dehydrogena 44.6 85 0.0029 27.2 8.2 79 72-161 29-119 (301)
268 3l18_A Intracellular protease 44.6 21 0.00073 28.2 4.0 71 73-158 1-71 (168)
269 1ufr_A TT1027, PYR mRNA-bindin 44.4 19 0.00064 29.5 3.7 30 72-104 94-123 (181)
270 2uvd_A 3-oxoacyl-(acyl-carrier 44.3 56 0.0019 27.1 6.7 80 72-161 2-93 (246)
271 1xq6_A Unknown protein; struct 44.2 84 0.0029 25.2 7.6 74 72-161 2-80 (253)
272 2ffj_A Conserved hypothetical 44.0 63 0.0021 29.4 7.5 82 75-163 165-262 (300)
273 3d3w_A L-xylulose reductase; u 44.0 1.1E+02 0.0036 25.0 8.3 75 72-160 5-86 (244)
274 2bgk_A Rhizome secoisolaricire 43.9 81 0.0028 26.2 7.7 36 70-111 12-47 (278)
275 3qw4_B UMP synthase; N-termina 43.7 39 0.0013 32.6 6.3 59 70-139 361-422 (453)
276 4dmm_A 3-oxoacyl-[acyl-carrier 43.6 74 0.0025 27.1 7.5 80 72-161 26-117 (269)
277 1gee_A Glucose 1-dehydrogenase 43.3 60 0.0021 26.8 6.7 80 72-161 5-96 (261)
278 3orf_A Dihydropteridine reduct 42.9 29 0.00099 29.2 4.7 41 66-113 15-55 (251)
279 1uls_A Putative 3-oxoacyl-acyl 42.9 94 0.0032 25.9 7.9 35 72-112 3-37 (245)
280 2xbl_A Phosphoheptose isomeras 42.8 45 0.0015 26.8 5.7 40 73-116 116-155 (198)
281 2fep_A Catabolite control prot 42.7 1.5E+02 0.005 24.8 9.5 39 73-111 15-53 (289)
282 3v2g_A 3-oxoacyl-[acyl-carrier 42.6 1.3E+02 0.0045 25.6 9.0 79 72-160 29-119 (271)
283 1qyc_A Phenylcoumaran benzylic 42.5 1E+02 0.0035 25.8 8.2 80 74-160 4-87 (308)
284 1rrv_A Glycosyltransferase GTF 42.3 38 0.0013 30.3 5.7 36 76-113 2-37 (416)
285 2bln_A Protein YFBG; transfera 42.3 62 0.0021 29.4 7.1 68 90-157 9-82 (305)
286 4da9_A Short-chain dehydrogena 42.2 72 0.0025 27.4 7.3 79 72-160 27-117 (280)
287 1rkx_A CDP-glucose-4,6-dehydra 42.2 67 0.0023 27.8 7.1 80 70-160 5-90 (357)
288 3h8l_A NADH oxidase; membrane 42.2 26 0.00088 31.5 4.5 71 92-162 185-270 (409)
289 1sb8_A WBPP; epimerase, 4-epim 42.1 1.4E+02 0.0048 25.8 9.1 83 72-161 25-113 (352)
290 2fvy_A D-galactose-binding per 42.1 1.5E+02 0.005 24.6 9.6 40 73-112 1-41 (309)
291 1o94_A Tmadh, trimethylamine d 41.8 52 0.0018 32.8 7.1 63 73-141 527-593 (729)
292 3rkr_A Short chain oxidoreduct 41.8 74 0.0025 26.7 7.1 83 67-160 22-116 (262)
293 3ucx_A Short chain dehydrogena 41.6 84 0.0029 26.5 7.5 80 70-160 7-98 (264)
294 1otf_A 4-oxalocrotonate tautom 41.6 31 0.0011 22.8 3.9 33 238-275 10-42 (62)
295 4e3z_A Putative oxidoreductase 41.5 67 0.0023 27.1 6.9 66 92-161 38-115 (272)
296 3hp4_A GDSL-esterase; psychrot 41.4 1.2E+02 0.004 23.3 8.3 44 73-116 1-49 (185)
297 3dzc_A UDP-N-acetylglucosamine 41.4 2E+02 0.0069 26.0 13.2 175 72-275 23-236 (396)
298 1iy8_A Levodione reductase; ox 41.4 94 0.0032 26.1 7.7 39 68-112 7-45 (267)
299 1p3y_1 MRSD protein; flavoprot 41.3 25 0.00087 30.2 4.2 74 72-156 6-87 (194)
300 3sju_A Keto reductase; short-c 41.2 83 0.0028 26.9 7.5 84 67-161 17-112 (279)
301 3r1i_A Short-chain type dehydr 41.0 1.3E+02 0.0044 25.8 8.7 79 72-161 30-120 (276)
302 2fb6_A Conserved hypothetical 41.0 61 0.0021 25.4 6.1 68 74-142 8-80 (117)
303 1sby_A Alcohol dehydrogenase; 40.8 91 0.0031 25.8 7.5 34 72-111 3-37 (254)
304 2yvq_A Carbamoyl-phosphate syn 40.8 63 0.0022 26.0 6.3 64 77-156 27-102 (143)
305 2x5n_A SPRPN10, 26S proteasome 40.5 61 0.0021 27.1 6.4 34 77-112 110-143 (192)
306 3tzq_B Short-chain type dehydr 40.5 1.3E+02 0.0045 25.4 8.6 36 72-113 9-44 (271)
307 3u9l_A 3-oxoacyl-[acyl-carrier 40.5 1.5E+02 0.005 26.3 9.2 83 72-160 3-97 (324)
308 2r6j_A Eugenol synthase 1; phe 40.1 83 0.0028 26.8 7.3 75 75-160 12-89 (318)
309 1fmt_A Methionyl-tRNA FMet for 40.0 63 0.0021 29.5 6.8 68 90-157 12-88 (314)
310 2yx6_A Hypothetical protein PH 39.9 42 0.0014 25.7 4.9 37 95-139 54-90 (121)
311 3ksu_A 3-oxoacyl-acyl carrier 39.8 1E+02 0.0035 26.1 7.7 82 72-161 9-102 (262)
312 3is3_A 17BETA-hydroxysteroid d 39.2 92 0.0031 26.3 7.4 80 72-161 16-107 (270)
313 3kke_A LACI family transcripti 39.2 1.6E+02 0.0055 24.7 8.9 41 73-113 14-54 (303)
314 3l6e_A Oxidoreductase, short-c 39.2 1E+02 0.0035 25.6 7.6 35 72-112 1-35 (235)
315 2opa_A Probable tautomerase YW 39.1 37 0.0013 22.4 3.9 33 238-275 10-42 (61)
316 3rag_A Uncharacterized protein 39.1 66 0.0023 28.9 6.7 37 73-112 9-46 (242)
317 3idf_A USP-like protein; unive 38.9 92 0.0031 22.9 6.5 23 93-115 17-41 (138)
318 4evq_A Putative ABC transporte 38.8 98 0.0034 26.5 7.5 82 92-173 138-231 (375)
319 2rk3_A Protein DJ-1; parkinson 38.6 1.1E+02 0.0038 24.9 7.5 75 72-159 1-75 (197)
320 3gpi_A NAD-dependent epimerase 38.6 19 0.00067 30.3 3.0 36 72-114 1-36 (286)
321 1o57_A PUR operon repressor; p 38.6 25 0.00084 31.8 3.8 35 71-108 193-227 (291)
322 4iiu_A 3-oxoacyl-[acyl-carrier 38.5 1E+02 0.0035 25.9 7.5 80 72-161 24-115 (267)
323 3d8u_A PURR transcriptional re 38.5 1.1E+02 0.0039 24.9 7.6 40 73-112 2-41 (275)
324 4gcm_A TRXR, thioredoxin reduc 38.4 73 0.0025 27.0 6.6 36 71-113 142-177 (312)
325 2bka_A CC3, TAT-interacting pr 38.3 54 0.0018 26.6 5.5 75 72-161 16-95 (242)
326 1xgk_A Nitrogen metabolite rep 38.2 1.4E+02 0.0048 26.5 8.7 74 73-159 4-82 (352)
327 4e5v_A Putative THUA-like prot 38.1 74 0.0025 28.5 6.9 39 73-112 3-42 (281)
328 1jf8_A Arsenate reductase; ptp 38.0 45 0.0015 26.4 4.9 78 72-158 1-82 (131)
329 4eyg_A Twin-arginine transloca 38.0 1.1E+02 0.0036 26.2 7.6 80 93-172 127-218 (368)
330 1w6u_A 2,4-dienoyl-COA reducta 37.9 48 0.0016 28.2 5.4 45 62-112 14-58 (302)
331 3grp_A 3-oxoacyl-(acyl carrier 37.7 1.4E+02 0.0047 25.4 8.3 36 71-112 24-59 (266)
332 3s55_A Putative short-chain de 37.7 1.8E+02 0.0063 24.4 10.3 38 70-113 6-43 (281)
333 1z7g_A HGPRT, HGPRTASE, hypoxa 37.7 39 0.0013 28.9 4.8 37 69-108 121-157 (217)
334 3qiv_A Short-chain dehydrogena 37.5 1.2E+02 0.0042 24.9 7.8 78 72-160 7-96 (253)
335 2jah_A Clavulanic acid dehydro 37.5 1.2E+02 0.0039 25.3 7.6 78 72-160 5-94 (247)
336 1tc1_A Protein (hypoxanthine p 37.5 34 0.0012 29.5 4.4 35 71-108 100-134 (220)
337 3mc3_A DSRE/DSRF-like family p 37.4 71 0.0024 25.1 6.0 43 74-116 16-58 (134)
338 3i1j_A Oxidoreductase, short c 37.3 90 0.0031 25.6 6.8 81 70-161 10-105 (247)
339 1iir_A Glycosyltransferase GTF 37.3 52 0.0018 29.4 5.8 36 76-113 2-37 (415)
340 3uve_A Carveol dehydrogenase ( 37.3 1.9E+02 0.0065 24.4 10.0 37 71-113 8-44 (286)
341 3trj_A Phosphoheptose isomeras 37.2 57 0.0019 27.2 5.6 39 74-116 115-153 (201)
342 4hwg_A UDP-N-acetylglucosamine 37.1 2.4E+02 0.0083 25.7 14.7 57 209-277 153-211 (385)
343 2g8l_A 287AA long hypothetical 37.0 1.1E+02 0.0039 27.8 8.0 81 74-161 160-256 (299)
344 3bbl_A Regulatory protein of L 36.9 1.8E+02 0.0062 24.1 8.8 39 73-111 3-45 (287)
345 1jeo_A MJ1247, hypothetical pr 36.3 66 0.0023 25.5 5.7 39 73-115 82-120 (180)
346 3brs_A Periplasmic binding pro 36.3 84 0.0029 25.9 6.5 38 73-111 4-44 (289)
347 2rhc_B Actinorhodin polyketide 36.2 1.3E+02 0.0044 25.6 7.8 78 72-160 20-109 (277)
348 3uf0_A Short-chain dehydrogena 36.1 1.7E+02 0.006 24.9 8.7 78 72-161 29-117 (273)
349 3ry0_A Putative tautomerase; o 36.0 42 0.0014 22.9 3.9 33 238-275 10-42 (65)
350 1xq1_A Putative tropinone redu 35.9 1E+02 0.0035 25.5 7.0 79 72-161 12-103 (266)
351 3edm_A Short chain dehydrogena 35.9 1.1E+02 0.0038 25.7 7.3 80 72-161 6-97 (259)
352 4e6p_A Probable sorbitol dehyd 35.8 1.3E+02 0.0045 25.1 7.8 34 72-111 6-39 (259)
353 1dbq_A Purine repressor; trans 35.7 1.8E+02 0.0062 23.8 8.8 39 73-111 6-44 (289)
354 3tov_A Glycosyl transferase fa 35.6 29 0.001 31.2 3.8 80 74-160 184-272 (349)
355 3oj0_A Glutr, glutamyl-tRNA re 35.6 55 0.0019 25.1 5.0 70 74-160 21-90 (144)
356 1qsg_A Enoyl-[acyl-carrier-pro 35.5 1.1E+02 0.0036 25.7 7.1 38 72-113 7-44 (265)
357 3ecs_A Translation initiation 35.4 1.9E+02 0.0066 26.6 9.4 83 67-158 114-197 (315)
358 3ej9_A Alpha-subunit of trans- 35.4 63 0.0022 23.1 4.9 33 238-275 11-43 (76)
359 1pzm_A HGPRT, hypoxanthine-gua 35.3 39 0.0013 28.7 4.4 35 71-108 115-149 (211)
360 3rwb_A TPLDH, pyridoxal 4-dehy 35.3 1.2E+02 0.0041 25.3 7.4 34 72-111 4-37 (247)
361 3u5t_A 3-oxoacyl-[acyl-carrier 35.1 1.7E+02 0.0057 24.9 8.4 66 92-161 39-116 (267)
362 3hs3_A Ribose operon repressor 35.1 68 0.0023 26.7 5.8 38 73-110 9-47 (277)
363 1wv2_A Thiazole moeity, thiazo 34.9 52 0.0018 30.2 5.4 83 79-161 110-220 (265)
364 1ea9_C Cyclomaltodextrinase; h 34.9 85 0.0029 30.4 7.2 47 93-139 174-238 (583)
365 1zk4_A R-specific alcohol dehy 34.8 1.1E+02 0.0037 25.0 6.9 35 72-112 4-38 (251)
366 3o1i_D Periplasmic protein TOR 34.8 1.4E+02 0.005 24.5 7.8 87 73-183 4-93 (304)
367 2pln_A HP1043, response regula 34.7 64 0.0022 23.4 5.0 37 66-108 10-46 (137)
368 3vtz_A Glucose 1-dehydrogenase 34.6 31 0.001 29.6 3.6 42 66-113 6-47 (269)
369 2ae2_A Protein (tropinone redu 34.5 1.4E+02 0.0047 24.9 7.7 78 72-160 7-97 (260)
370 3nrc_A Enoyl-[acyl-carrier-pro 34.5 57 0.002 27.8 5.3 84 67-161 19-114 (280)
371 3k4h_A Putative transcriptiona 34.4 1.9E+02 0.0066 23.7 9.3 37 74-110 8-49 (292)
372 3jx9_A Putative phosphoheptose 34.4 42 0.0014 28.4 4.4 39 70-112 74-112 (170)
373 3h7a_A Short chain dehydrogena 34.4 1.7E+02 0.006 24.4 8.3 79 72-161 5-94 (252)
374 3ic9_A Dihydrolipoamide dehydr 34.4 97 0.0033 29.0 7.3 58 74-139 174-234 (492)
375 3p9x_A Phosphoribosylglycinami 34.2 1.2E+02 0.0042 26.3 7.5 82 75-168 4-102 (211)
376 3rd5_A Mypaa.01249.C; ssgcid, 34.1 76 0.0026 27.1 6.1 78 70-161 12-97 (291)
377 1ff9_A Saccharopine reductase; 34.0 50 0.0017 31.3 5.3 73 72-160 1-78 (450)
378 2pnf_A 3-oxoacyl-[acyl-carrier 33.9 1.1E+02 0.0038 24.8 6.8 35 72-112 5-39 (248)
379 3n74_A 3-ketoacyl-(acyl-carrie 33.9 1.4E+02 0.0049 24.6 7.6 34 72-111 7-40 (261)
380 3lyl_A 3-oxoacyl-(acyl-carrier 33.7 1.4E+02 0.0047 24.5 7.4 79 72-161 3-93 (247)
381 3enk_A UDP-glucose 4-epimerase 33.7 2.2E+02 0.0075 24.2 9.0 78 73-161 4-89 (341)
382 2ab0_A YAJL; DJ-1/THIJ superfa 33.6 1.3E+02 0.0043 24.9 7.2 74 74-159 2-75 (205)
383 2wan_A Pullulanase; hydrolase, 33.6 42 0.0014 35.0 5.0 26 201-229 597-623 (921)
384 3grk_A Enoyl-(acyl-carrier-pro 33.6 75 0.0026 27.5 6.0 40 68-111 25-64 (293)
385 2ywl_A Thioredoxin reductase r 33.6 1E+02 0.0035 23.9 6.3 78 88-166 8-114 (180)
386 3m20_A 4-oxalocrotonate tautom 33.5 68 0.0023 21.8 4.7 33 238-275 9-41 (62)
387 2z5l_A Tylkr1, tylactone synth 33.5 1.8E+02 0.0062 27.9 9.2 85 70-161 255-346 (511)
388 3cg0_A Response regulator rece 33.5 1E+02 0.0035 22.1 5.9 32 74-111 9-40 (140)
389 1lss_A TRK system potassium up 33.5 1.4E+02 0.0047 21.8 6.8 71 74-160 4-79 (140)
390 3c3k_A Alanine racemase; struc 33.4 2E+02 0.007 23.7 9.1 39 73-111 7-45 (285)
391 1vb5_A Translation initiation 33.2 1.9E+02 0.0066 25.7 8.8 82 67-157 102-184 (276)
392 3tqr_A Phosphoribosylglycinami 33.2 1.7E+02 0.0057 25.4 8.2 81 75-167 7-103 (215)
393 3rht_A (gatase1)-like protein; 33.2 51 0.0017 29.5 4.9 33 75-113 5-39 (259)
394 2z1n_A Dehydrogenase; reductas 33.1 1.5E+02 0.0052 24.7 7.7 35 72-112 5-39 (260)
395 3hzh_A Chemotaxis response reg 32.9 1.4E+02 0.0047 22.4 6.8 36 70-111 32-67 (157)
396 1oao_A CODH, carbon monoxide d 32.9 61 0.0021 33.4 6.0 74 68-158 267-353 (674)
397 4ehi_A Bifunctional purine bio 32.8 76 0.0026 31.9 6.5 53 68-137 17-69 (534)
398 3rft_A Uronate dehydrogenase; 32.8 1E+02 0.0034 25.9 6.5 71 72-160 1-74 (267)
399 2i6u_A Otcase, ornithine carba 32.7 2.1E+02 0.0073 26.2 9.2 81 72-161 146-228 (307)
400 1y1p_A ARII, aldehyde reductas 32.7 82 0.0028 26.7 6.0 82 69-161 6-94 (342)
401 4a8p_A Putrescine carbamoyltra 32.7 2E+02 0.0068 27.1 9.1 78 72-158 151-228 (355)
402 1s96_A Guanylate kinase, GMP k 32.6 84 0.0029 26.6 6.1 70 74-159 108-183 (219)
403 1np3_A Ketol-acid reductoisome 32.6 64 0.0022 29.0 5.6 73 69-161 11-83 (338)
404 3miz_A Putative transcriptiona 32.6 1.2E+02 0.0042 25.3 7.0 40 73-112 12-52 (301)
405 1yo6_A Putative carbonyl reduc 32.5 1.2E+02 0.0041 24.4 6.7 35 72-112 1-37 (250)
406 3qlj_A Short chain dehydrogena 32.5 2.4E+02 0.0081 24.5 9.1 89 67-161 20-125 (322)
407 1fsg_A HGPRTASE, hypoxanthine- 32.5 56 0.0019 28.2 5.0 37 69-108 137-173 (233)
408 3kvo_A Hydroxysteroid dehydrog 32.4 2.5E+02 0.0086 25.2 9.5 83 71-160 42-139 (346)
409 3kht_A Response regulator; PSI 32.3 1.2E+02 0.0041 22.1 6.2 36 72-113 3-38 (144)
410 3mb2_A 4-oxalocrotonate tautom 32.3 59 0.002 22.7 4.2 33 238-275 11-43 (72)
411 3tpf_A Otcase, ornithine carba 32.2 1.8E+02 0.0062 26.7 8.6 80 72-159 143-223 (307)
412 3m21_A Probable tautomerase HP 32.1 54 0.0018 22.5 4.0 33 238-275 13-45 (67)
413 3tpc_A Short chain alcohol deh 32.1 1.7E+02 0.0057 24.4 7.8 36 72-113 5-40 (257)
414 3abf_A 4-oxalocrotonate tautom 32.1 64 0.0022 21.4 4.3 34 238-276 11-44 (64)
415 1sqs_A Conserved hypothetical 32.0 1.7E+02 0.0059 24.5 7.9 83 76-160 3-89 (242)
416 3tnl_A Shikimate dehydrogenase 31.9 2.5E+02 0.0087 25.5 9.5 80 72-160 152-236 (315)
417 3ghy_A Ketopantoate reductase 31.9 57 0.002 29.0 5.0 80 73-171 2-89 (335)
418 1o13_A Probable NIFB protein; 31.9 33 0.0011 27.4 3.2 37 95-139 67-103 (136)
419 1vlv_A Otcase, ornithine carba 31.7 1.7E+02 0.0058 27.2 8.4 80 72-160 165-246 (325)
420 2rjo_A Twin-arginine transloca 31.7 2.4E+02 0.0081 24.0 8.8 38 74-111 5-42 (332)
421 1psw_A ADP-heptose LPS heptosy 31.7 78 0.0027 27.3 5.8 80 74-160 179-272 (348)
422 1eo1_A Hypothetical protein MT 31.7 43 0.0015 25.8 3.7 37 95-139 56-92 (124)
423 1xfi_A Unknown protein; struct 31.7 1.7E+02 0.0057 27.5 8.4 43 75-121 213-257 (367)
424 1z45_A GAL10 bifunctional prot 31.7 2.2E+02 0.0077 27.6 9.6 84 70-161 7-95 (699)
425 2yfk_A Aspartate/ornithine car 31.6 2.6E+02 0.0089 26.9 9.9 87 72-161 186-274 (418)
426 1yxm_A Pecra, peroxisomal tran 31.6 2.1E+02 0.0072 24.2 8.4 36 71-112 15-50 (303)
427 1rdu_A Conserved hypothetical 31.6 37 0.0013 25.8 3.3 37 95-139 53-89 (116)
428 2hk9_A Shikimate dehydrogenase 31.6 33 0.0011 29.9 3.4 70 72-161 127-197 (275)
429 4a8t_A Putrescine carbamoyltra 31.5 2.2E+02 0.0074 26.6 9.1 78 72-158 173-250 (339)
430 1gyx_A YDCE, B1461, hypothetic 31.5 52 0.0018 23.3 3.9 33 238-275 10-43 (76)
431 1zcz_A Bifunctional purine bio 31.5 39 0.0013 33.4 4.1 46 77-139 15-60 (464)
432 3ttv_A Catalase HPII; heme ori 31.4 82 0.0028 32.9 6.7 74 70-158 596-669 (753)
433 3clk_A Transcription regulator 31.4 1.7E+02 0.0057 24.3 7.6 38 73-110 7-44 (290)
434 2h3h_A Sugar ABC transporter, 31.3 1.9E+02 0.0066 24.3 8.1 13 263-276 203-215 (313)
435 1hdc_A 3-alpha, 20 beta-hydrox 31.2 1.5E+02 0.0053 24.7 7.4 35 72-112 3-37 (254)
436 2yva_A DNAA initiator-associat 31.1 55 0.0019 26.3 4.4 38 74-115 110-147 (196)
437 4imr_A 3-oxoacyl-(acyl-carrier 31.1 2.5E+02 0.0085 23.9 9.6 78 72-160 31-119 (275)
438 2cwd_A Low molecular weight ph 31.1 1.4E+02 0.0048 24.2 7.0 89 74-166 4-99 (161)
439 4dad_A Putative pilus assembly 31.0 72 0.0025 23.4 4.8 37 69-111 15-52 (146)
440 3h2s_A Putative NADH-flavin re 30.9 47 0.0016 26.5 4.0 59 92-160 12-72 (224)
441 3l4b_C TRKA K+ channel protien 30.9 1.3E+02 0.0044 24.6 6.7 59 92-159 11-74 (218)
442 1s8n_A Putative antiterminator 30.8 1.3E+02 0.0045 23.6 6.6 33 73-111 12-44 (205)
443 3cxt_A Dehydrogenase with diff 30.8 1.4E+02 0.0049 25.8 7.4 78 72-160 32-121 (291)
444 8abp_A L-arabinose-binding pro 30.6 2.1E+02 0.0071 23.7 8.1 82 75-184 3-89 (306)
445 1b93_A Protein (methylglyoxal 30.6 86 0.0029 26.3 5.6 67 74-156 11-88 (152)
446 3tfo_A Putative 3-oxoacyl-(acy 30.4 1.2E+02 0.0042 25.9 6.8 78 72-160 2-91 (264)
447 3ak4_A NADH-dependent quinucli 30.3 1.8E+02 0.0061 24.2 7.6 35 72-112 10-44 (263)
448 1duv_G Octase-1, ornithine tra 30.3 1.3E+02 0.0044 28.1 7.3 81 72-161 153-235 (333)
449 3zqu_A Probable aromatic acid 30.2 71 0.0024 27.8 5.3 40 73-115 3-42 (209)
450 1h5q_A NADP-dependent mannitol 30.2 1.6E+02 0.0054 24.1 7.2 36 72-113 12-47 (265)
451 1hyu_A AHPF, alkyl hydroperoxi 30.1 74 0.0025 30.2 5.8 58 72-139 353-411 (521)
452 2d1y_A Hypothetical protein TT 30.1 1.6E+02 0.0055 24.5 7.3 36 72-113 4-39 (256)
453 3fr7_A Putative ketol-acid red 30.1 45 0.0015 33.5 4.3 102 68-187 47-157 (525)
454 1x92_A APC5045, phosphoheptose 30.1 58 0.002 26.3 4.4 39 73-115 113-151 (199)
455 4e08_A DJ-1 beta; flavodoxin-l 30.1 85 0.0029 25.4 5.5 71 74-158 5-75 (190)
456 3t7c_A Carveol dehydrogenase; 29.9 2.7E+02 0.0091 23.9 10.5 85 71-161 25-128 (299)
457 3sxp_A ADP-L-glycero-D-mannohe 29.9 1.6E+02 0.0055 25.6 7.6 36 72-113 8-45 (362)
458 2jbh_A Phosphoribosyltransfera 29.8 70 0.0024 27.3 5.1 36 70-108 130-165 (225)
459 2x4k_A 4-oxalocrotonate tautom 29.8 1.1E+02 0.0038 19.8 5.1 33 238-275 13-45 (63)
460 1w30_A PYRR bifunctional prote 29.8 47 0.0016 28.0 4.0 33 71-106 109-142 (201)
461 3l4e_A Uncharacterized peptida 29.7 1.3E+02 0.0043 25.7 6.7 80 75-159 3-88 (206)
462 1tjy_A Sugar transport protein 29.7 1.9E+02 0.0064 24.7 7.8 31 148-183 58-91 (316)
463 3fxa_A SIS domain protein; str 29.7 66 0.0023 26.1 4.7 38 74-115 93-130 (201)
464 3u3x_A Oxidoreductase; structu 29.5 2.5E+02 0.0084 25.2 8.9 85 72-172 24-112 (361)
465 1edo_A Beta-keto acyl carrier 29.5 1.7E+02 0.0057 23.7 7.2 66 92-161 13-90 (244)
466 3m2p_A UDP-N-acetylglucosamine 29.3 2.3E+02 0.0079 23.9 8.3 68 74-160 2-72 (311)
467 3sx6_A Sulfide-quinone reducta 29.2 95 0.0032 28.3 6.2 66 74-139 149-228 (437)
468 2zat_A Dehydrogenase/reductase 29.2 2E+02 0.0068 23.9 7.8 80 71-161 11-102 (260)
469 2fr1_A Erythromycin synthase, 29.2 2.2E+02 0.0074 27.0 8.9 85 70-161 222-317 (486)
470 2xhz_A KDSD, YRBH, arabinose 5 29.2 62 0.0021 25.7 4.4 39 73-115 96-134 (183)
471 3sx2_A Putative 3-ketoacyl-(ac 29.2 2.5E+02 0.0087 23.5 10.4 38 70-113 9-46 (278)
472 3ggo_A Prephenate dehydrogenas 29.2 57 0.0019 29.2 4.6 66 75-160 34-104 (314)
473 2qr3_A Two-component system re 29.2 77 0.0026 22.8 4.6 33 72-110 1-33 (140)
474 1pvv_A Otcase, ornithine carba 29.0 2.3E+02 0.0078 26.1 8.7 79 72-160 153-233 (315)
475 1m6i_A Programmed cell death p 29.0 1.1E+02 0.0036 28.8 6.6 81 74-161 180-281 (493)
476 3hvu_A Hypoxanthine phosphorib 29.0 56 0.0019 28.1 4.3 35 71-108 113-147 (204)
477 2o8n_A APOA-I binding protein; 29.0 1.2E+02 0.004 27.3 6.6 76 75-156 80-156 (265)
478 4f82_A Thioredoxin reductase; 28.9 1.3E+02 0.0043 25.3 6.4 44 70-113 43-92 (176)
479 2fn9_A Ribose ABC transporter, 28.8 2.4E+02 0.0083 23.1 9.4 38 75-112 3-40 (290)
480 1rw7_A YDR533CP; alpha-beta sa 28.7 48 0.0016 28.4 3.8 42 75-116 4-54 (243)
481 1dxh_A Ornithine carbamoyltran 28.7 2.2E+02 0.0074 26.5 8.6 81 72-161 153-235 (335)
482 1vp8_A Hypothetical protein AF 28.7 70 0.0024 28.4 4.9 38 103-140 65-105 (201)
483 4hcj_A THIJ/PFPI domain protei 28.6 49 0.0017 27.5 3.8 55 91-157 22-76 (177)
484 3kcq_A Phosphoribosylglycinami 28.6 1.4E+02 0.0046 26.0 6.8 81 75-167 10-102 (215)
485 1shu_X Anthrax toxin receptor 28.5 1.1E+02 0.0036 23.8 5.6 38 75-112 105-142 (182)
486 2pd4_A Enoyl-[acyl-carrier-pro 28.5 2.2E+02 0.0074 24.0 8.0 38 72-113 4-41 (275)
487 3qk7_A Transcriptional regulat 28.4 2.6E+02 0.0088 23.3 9.8 21 92-112 28-48 (294)
488 3rc1_A Sugar 3-ketoreductase; 28.3 2.3E+02 0.0077 25.3 8.4 85 72-172 25-113 (350)
489 3ai3_A NADPH-sorbose reductase 28.2 2E+02 0.0068 23.9 7.6 35 72-112 5-39 (263)
490 2ab1_A Hypothetical protein; H 28.1 1.8E+02 0.0061 23.1 6.9 70 91-185 49-119 (122)
491 2gkg_A Response regulator homo 28.1 69 0.0024 22.4 4.1 31 72-108 3-33 (127)
492 3d4o_A Dipicolinate synthase s 27.8 87 0.003 27.4 5.5 69 72-158 153-221 (293)
493 2f9f_A First mannosyl transfer 27.8 2.1E+02 0.0072 22.1 8.4 93 67-168 15-118 (177)
494 2gi4_A Possible phosphotyrosin 27.7 64 0.0022 26.3 4.3 91 75-168 2-99 (156)
495 3qp9_A Type I polyketide synth 27.7 1.5E+02 0.0051 28.5 7.5 88 68-161 245-353 (525)
496 3c1o_A Eugenol synthase; pheny 27.6 2.8E+02 0.0095 23.4 8.5 68 92-160 16-87 (321)
497 4eso_A Putative oxidoreductase 27.6 1.5E+02 0.0053 24.8 6.8 35 72-112 6-40 (255)
498 4dqx_A Probable oxidoreductase 27.5 2E+02 0.0068 24.6 7.7 35 72-112 25-59 (277)
499 3etn_A Putative phosphosugar i 27.5 1E+02 0.0034 25.9 5.6 39 73-115 106-146 (220)
500 2dtx_A Glucose 1-dehydrogenase 27.5 2.6E+02 0.009 23.5 8.3 36 72-113 6-41 (264)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.59 E-value=1.3e-07 Score=83.76 Aligned_cols=191 Identities=14% Similarity=0.056 Sum_probs=106.9
Q ss_pred cccEEEEEecc---CCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhh-----------hHHHHHHcCCceee
Q 023401 73 KSKLVLLVSHE---LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYS-----------LEHKMWDRGVQVIS 138 (282)
Q Consensus 73 ~~KkILLISHE---Ls~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~-----------L~~kll~rgI~v~~ 138 (282)
|..|||+|+++ ....|+...+.+||+.|.+.|++|.+++...+...+..... +.++ ...|+++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~v~~ 79 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYE-ERGNLRIYR 79 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEE-EETTEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeec-cCCCceEEE
Confidence 34689999999 56689999999999999999999999995544321110000 0000 112343332
Q ss_pred hhc----------------h-----------hHHHH----hhccCEEEEechhchHHHHHHhh-ccCCCCCCceEEEeee
Q 023401 139 AKG----------------Q-----------ETINT----ALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHE 186 (282)
Q Consensus 139 ~k~----------------~-----------~~i~~----a~~~DLVIaNT~v~g~wl~~l~~-~~~~~~~~pVIWWIHE 186 (282)
-.. . +.++. ..++|+|++++...+-....+.+ .+. |+|+++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~-----~~v~~~h~ 154 (439)
T 3fro_A 80 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKI-----PAVFTIHR 154 (439)
T ss_dssp EESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCC-----CEEEEESC
T ss_pred ecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCC-----CEEEEecc
Confidence 100 0 01111 23799999998655322222211 233 99999999
Q ss_pred ccccc----------------cc--------ccccccccccccccccchhhHHHHHHhhhhhcCCCCCCeeEEEecCcHH
Q 023401 187 MRGHY----------------FK--------LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKE 242 (282)
Q Consensus 187 ~r~~Y----------------f~--------l~~vkhL~~v~~~~~dS~Ata~~w~~~~~~~l~Ikl~~~~vv~L~~~~~ 242 (282)
..... .. +++.+++.++ |+.++++.....+ +.-.+..|++-|...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~------S~~~~~~~~~~~~----~~~~~i~vi~ngvd~~ 224 (439)
T 3fro_A 155 LNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTV------SRGYLIDEWGFFR----NFEGKITYVFNGIDCS 224 (439)
T ss_dssp CCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEES------CHHHHHHTHHHHG----GGTTSEEECCCCCCTT
T ss_pred cccccCchHHhCccccccccccceeeHhhhhhhhccEEEec------CHHHHHHHhhhhh----hcCCceeecCCCCCch
Confidence 85321 10 2334455555 9999888443332 1112333455544433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc
Q 023401 243 LMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINRHR 280 (282)
Q Consensus 243 l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~~~s~~ 280 (282)
...-......+...++.+|+++|++++ .+|+.+.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~ 261 (439)
T 3fro_A 225 FWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFD 261 (439)
T ss_dssp TSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSS
T ss_pred hcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccc
Confidence 222000000122367889999999888 8887776653
No 2
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.59 E-value=7.5e-08 Score=84.25 Aligned_cols=180 Identities=14% Similarity=0.082 Sum_probs=113.1
Q ss_pred ccccEEEEEeccCC--CCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHH-HHcCCceeehhc-------
Q 023401 72 MKSKLVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKM-WDRGVQVISAKG------- 141 (282)
Q Consensus 72 ~~~KkILLISHELs--~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kl-l~rgI~v~~~k~------- 141 (282)
|+.+||++|++... ..|+...+.++++.| .|++|.+++...+.. ..+.+ ...|++++.-..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAE-------EAHAYDKTLDYEVIRWPRSVMLPTP 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHH-------HHHHHHTTCSSEEEEESSSSCCSCH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCcc-------chhhhccccceEEEEccccccccch
Confidence 45678999999776 789999999999999 599999999665521 01222 234777664321
Q ss_pred --hhHHH---HhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc-----------cccccccccccc
Q 023401 142 --QETIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----------LDYVKHLPLVAG 205 (282)
Q Consensus 142 --~~~i~---~a~~~DLVIaNT~v~g~wl~~l~~~~~~~~~~pVIWWIHE~r~~Yf~-----------l~~vkhL~~v~~ 205 (282)
...+. ...++|+|++++.....++..+.+.. ..|++|+++|...-.+.. ++++.++.++
T Consensus 73 ~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~-- 147 (394)
T 3okp_A 73 TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQA---GASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYI-- 147 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHT---TCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEES--
T ss_pred hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhc---CCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEc--
Confidence 11121 24579999998876555555443221 345699999976422111 3455666677
Q ss_pred ccccchhhHHHHHHhhhhhcCCCCCCeeEEEecCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccc
Q 023401 206 AMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINRH 279 (282)
Q Consensus 206 ~~~dS~Ata~~w~~~~~~~l~Ikl~~~~vv~L~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~~~s~ 279 (282)
|+.+++++.+......+ ..+++-+...+... .. ....++.+|+++|++++..+|+.+.++
T Consensus 148 ----s~~~~~~~~~~~~~~~~-----~~vi~ngv~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~i~~~G~~ 207 (394)
T 3okp_A 148 ----SQYTLRRFKSAFGSHPT-----FEHLPSGVDVKRFT----PA-TPEDKSATRKKLGFTDTTPVIACNSRL 207 (394)
T ss_dssp ----CHHHHHHHHHHHCSSSE-----EEECCCCBCTTTSC----CC-CHHHHHHHHHHTTCCTTCCEEEEESCS
T ss_pred ----CHHHHHHHHHhcCCCCC-----eEEecCCcCHHHcC----CC-CchhhHHHHHhcCCCcCceEEEEEecc
Confidence 99999999988753222 23344443332221 00 012467789999999998888777664
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.33 E-value=6.6e-07 Score=80.31 Aligned_cols=178 Identities=19% Similarity=0.163 Sum_probs=99.7
Q ss_pred cEEEEEeccCC---------CCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh-----
Q 023401 75 KLVLLVSHELS---------LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK----- 140 (282)
Q Consensus 75 KkILLISHELs---------~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k----- 140 (282)
+||++|+++.. ..|+...+.+|++.|.+.|++|.+++...++..... .....|+.+..-.
T Consensus 21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~------~~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI------VRVAENLRVINIAAGPYE 94 (438)
T ss_dssp CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE------EEEETTEEEEEECCSCSS
T ss_pred heeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc------ccccCCeEEEEecCCCcc
Confidence 58999999763 468899999999999999999999996544211100 0001233332100
Q ss_pred ---------chh----H-----HHHhhccCEEEEechhchHHHHHHhh-ccCCCCCCceEEEeeecccc---ccc-----
Q 023401 141 ---------GQE----T-----INTALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGH---YFK----- 193 (282)
Q Consensus 141 ---------~~~----~-----i~~a~~~DLVIaNT~v~g~wl~~l~~-~~~~~~~~pVIWWIHE~r~~---Yf~----- 193 (282)
... . ++...++|+|++++...+.+...+.+ .+. |+|+.+|+.... +..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~-----p~v~~~h~~~~~~~~~~~~~~~~ 169 (438)
T 3c48_A 95 GLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRI-----PLIHTAHTLAAVKNSYRDDSDTP 169 (438)
T ss_dssp SCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTC-----CEEEECSSCHHHHSCC----CCH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCC-----CEEEEecCCcccccccccccCCc
Confidence 000 1 11112499999997543322211211 133 999999997411 100
Q ss_pred ------------ccccccccccccccccchhhHHHHHHhhh-hhcCCCCCCeeEEEecCcHHHHHHHHHHHHHHHHHHHH
Q 023401 194 ------------LDYVKHLPLVAGAMIDSHVTAEYWKNRTR-ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHV 260 (282)
Q Consensus 194 ------------l~~vkhL~~v~~~~~dS~Ata~~w~~~~~-~~l~Ikl~~~~vv~L~~~~~l~~~a~~~v~~~~lre~v 260 (282)
++++++++++ |+.+++++.+.++ +..++ .|++-+...+... .. .+..++..
T Consensus 170 ~~~~~~~~~~~~~~~~d~ii~~------s~~~~~~~~~~~g~~~~k~-----~vi~ngvd~~~~~----~~-~~~~~~~~ 233 (438)
T 3c48_A 170 ESEARRICEQQLVDNADVLAVN------TQEEMQDLMHHYDADPDRI-----SVVSPGADVELYS----PG-NDRATERS 233 (438)
T ss_dssp HHHHHHHHHHHHHHHCSEEEES------SHHHHHHHHHHHCCCGGGE-----EECCCCCCTTTSC----CC-----CHHH
T ss_pred chHHHHHHHHHHHhcCCEEEEc------CHHHHHHHHHHhCCChhhe-----EEecCCccccccC----Cc-ccchhhhh
Confidence 2334445555 9999999987664 22222 3344444332221 00 11234558
Q ss_pred HHHhCCCCCCEEEEEeccc
Q 023401 261 RESLGVRNEDLLFAIINRH 279 (282)
Q Consensus 261 r~~lGl~~dd~lv~~~~s~ 279 (282)
|+++|++++..+|+.+.+.
T Consensus 234 r~~~~~~~~~~~i~~~G~~ 252 (438)
T 3c48_A 234 RRELGIPLHTKVVAFVGRL 252 (438)
T ss_dssp HHHTTCCSSSEEEEEESCB
T ss_pred HHhcCCCCCCcEEEEEeee
Confidence 8999999998888777654
No 4
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.25 E-value=2.7e-06 Score=76.25 Aligned_cols=109 Identities=17% Similarity=0.326 Sum_probs=68.5
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH--cCCcee--ehhchhH-
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQVI--SAKGQET- 144 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~--rgI~v~--~~k~~~~- 144 (282)
.-|+++||++|++.....|+...+.+|++.|++.|++|.+++..+++ .. +.+.+.+.. .|.+.+ .......
T Consensus 36 ~~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (416)
T 2x6q_A 36 EKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPT---EF-FNVTKTFHNALQGNESLKLTEEMKELY 111 (416)
T ss_dssp HTTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH---HH-HHHHHHHHHHHTTCCSCCCCHHHHHHH
T ss_pred hhhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc---ch-hhhhcccceeecccccccccHHHHHHH
Confidence 34678899999999988899999999999999999999998855442 11 111122211 132121 1111111
Q ss_pred ------H-H--HhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeecc
Q 023401 145 ------I-N--TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR 188 (282)
Q Consensus 145 ------i-~--~a~~~DLVIaNT~v~g~wl~~l~~~~~~~~~~pVIWWIHE~r 188 (282)
+ + ...++|+|++++.....+.. +. ... .|+|+++|+..
T Consensus 112 ~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~-~~----~~~-~p~v~~~h~~~ 158 (416)
T 2x6q_A 112 LNVNRENSKFIDLSSFDYVLVHDPQPAALIE-FY----EKK-SPWLWRCHIDL 158 (416)
T ss_dssp HHHHHHHHHSSCGGGSSEEEEESSTTGGGGG-GS----CCC-SCEEEECCSCC
T ss_pred HHHHHHHHHHHhhcCCCEEEEeccchhhHHH-HH----Hhc-CCEEEEEcccc
Confidence 1 1 13379999999875544432 22 112 49999999854
No 5
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.10 E-value=9.5e-07 Score=81.71 Aligned_cols=184 Identities=13% Similarity=0.111 Sum_probs=103.1
Q ss_pred cEEEEEeccC-------------CCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCc-hhhhhhhHHHH-HHcCCceeeh
Q 023401 75 KLVLLVSHEL-------------SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE-DEVIYSLEHKM-WDRGVQVISA 139 (282)
Q Consensus 75 KkILLISHEL-------------s~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~-~~v~~~L~~kl-l~rgI~v~~~ 139 (282)
+||++|++.. +..|+...+.+|++.|.+.|++|.+++...++.. ......++ ++ ...|+++..-
T Consensus 8 MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~gv~v~~~ 86 (499)
T 2r60_A 8 KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEID-YYQETNKVRIVRI 86 (499)
T ss_dssp CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEE-ECTTCSSEEEEEE
T ss_pred ceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHH-hccCCCCeEEEEe
Confidence 6899999864 5678899999999999999999999996543211 11000000 00 0235554421
Q ss_pred h--------------ch----hHH-HHh----hccCEEEEechhchHHHHHHhh-ccCCCCCCceEEEeeecccccc---
Q 023401 140 K--------------GQ----ETI-NTA----LKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGHYF--- 192 (282)
Q Consensus 140 k--------------~~----~~i-~~a----~~~DLVIaNT~v~g~wl~~l~~-~~~~~~~~pVIWWIHE~r~~Yf--- 192 (282)
. .. ..+ +.. .++|+|.+++...+.+...+.+ .++ |+|+++|+....+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~-----p~v~~~H~~~~~~~~~~ 161 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGL-----PFTFTGHSLGAQKMEKL 161 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCC-----CEEEECSSCHHHHHHTT
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCC-----cEEEEccCcccccchhh
Confidence 0 00 111 111 3799999998653322221211 133 89999999641100
Q ss_pred -----------------------c--ccccccccccccccccchhhHHHHHHh--hh------hhcCCCCCCeeEEEecC
Q 023401 193 -----------------------K--LDYVKHLPLVAGAMIDSHVTAEYWKNR--TR------ERLRIKMPDTYVVHLGN 239 (282)
Q Consensus 193 -----------------------~--l~~vkhL~~v~~~~~dS~Ata~~w~~~--~~------~~l~Ikl~~~~vv~L~~ 239 (282)
. ++++++++++ |+.+++++.+. ++ +.. +..|++-+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~------S~~~~~~~~~~~~~g~~~~~~~~~-----ki~vi~ngv 230 (499)
T 2r60_A 162 NVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVS------TSQERFGQYSHDLYRGAVNVEDDD-----KFSVIPPGV 230 (499)
T ss_dssp CCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEES------SHHHHHHTTTSGGGTTTCCTTCGG-----GEEECCCCB
T ss_pred ccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEEC------CHHHHHHHHhhhcccccccccCCC-----CeEEECCCc
Confidence 0 2334445555 99999887665 43 111 233455544
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCEEEEEeccc
Q 023401 240 SKELMEVAEDNVAKRVLREHVRESLG-----VRNEDLLFAIINRH 279 (282)
Q Consensus 240 ~~~l~~~a~~~v~~~~lre~vr~~lG-----l~~dd~lv~~~~s~ 279 (282)
..+...-.. +...|+.+|+++| ++++..+|+.+..+
T Consensus 231 d~~~~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl 271 (499)
T 2r60_A 231 NTRVFDGEY----GDKIKAKITKYLERDLGSERMELPAIIASSRL 271 (499)
T ss_dssp CTTTSSSCC----CHHHHHHHHHHHHHHSCGGGTTSCEEEECSCC
T ss_pred ChhhcCccc----hhhhHHHHHHHhcccccccCCCCcEEEEeecC
Confidence 332221000 0024567889999 98888888776654
No 6
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.01 E-value=1.1e-05 Score=70.25 Aligned_cols=119 Identities=15% Similarity=0.047 Sum_probs=80.8
Q ss_pred ccccEEEEEecc--------------CCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 023401 72 MKSKLVLLVSHE--------------LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 72 ~~~KkILLISHE--------------Ls~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~ 137 (282)
|+.+||++|++. ....|+...+.++++.|.+.|++|.+++...+... ..+++++
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~------------~~~~~~~ 68 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG------------RPGLTVV 68 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC------------STTEEEC
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC------------CCcceec
Confidence 566899999998 25578999999999999999999999996655321 1344444
Q ss_pred ehhchhHHH---HhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeecccccccccccccccccccccccchhhH
Q 023401 138 SAKGQETIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTA 214 (282)
Q Consensus 138 ~~k~~~~i~---~a~~~DLVIaNT~v~g~wl~~l~~~~~~~~~~pVIWWIHE~r~~Yf~l~~vkhL~~v~~~~~dS~Ata 214 (282)
.......+. ...++|+|++++...+-+. .. ....| |+++|+....+. ...+++++ |+.++
T Consensus 69 ~~~~~~~l~~~l~~~~~Dvi~~~~~~~~~~~--~~-----~~~~p-v~~~h~~~~~~~---~~d~ii~~------S~~~~ 131 (342)
T 2iuy_A 69 PAGEPEEIERWLRTADVDVVHDHSGGVIGPA--GL-----PPGTA-FISSHHFTTRPV---NPVGCTYS------SRAQR 131 (342)
T ss_dssp SCCSHHHHHHHHHHCCCSEEEECSSSSSCST--TC-----CTTCE-EEEEECSSSBCS---CCTTEEES------CHHHH
T ss_pred cCCcHHHHHHHHHhcCCCEEEECCchhhHHH--Hh-----hcCCC-EEEecCCCCCcc---cceEEEEc------CHHHH
Confidence 332222222 2357999999987644332 11 11238 999999865443 36677777 99999
Q ss_pred HHHHH
Q 023401 215 EYWKN 219 (282)
Q Consensus 215 ~~w~~ 219 (282)
+++.+
T Consensus 132 ~~~~~ 136 (342)
T 2iuy_A 132 AHCGG 136 (342)
T ss_dssp HHTTC
T ss_pred HHHhc
Confidence 88874
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.97 E-value=6.7e-06 Score=75.38 Aligned_cols=40 Identities=23% Similarity=0.169 Sum_probs=35.1
Q ss_pred cEEEEEeccC----CCCCchHHHHHHHHHHHhCCCeEEEEeccC
Q 023401 75 KLVLLVSHEL----SLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (282)
Q Consensus 75 KkILLISHEL----s~TGAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (282)
+||++|+++. ...|+...+.+|++.|.+.|++|.+++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 3799999988 357899999999999999999999999543
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.91 E-value=2.3e-05 Score=71.77 Aligned_cols=40 Identities=18% Similarity=0.050 Sum_probs=35.1
Q ss_pred cEEEEEeccC----CCCCchHHHHHHHHHHHhCCCeEEEEeccC
Q 023401 75 KLVLLVSHEL----SLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (282)
Q Consensus 75 KkILLISHEL----s~TGAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (282)
.||++|+++. ...|+...+.+|++.|.+.|++|.+++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 3799999987 457889999999999999999999999543
No 9
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=97.88 E-value=2.8e-06 Score=73.94 Aligned_cols=173 Identities=12% Similarity=0.050 Sum_probs=95.1
Q ss_pred EEEEEeccC-CCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh------------ch
Q 023401 76 LVLLVSHEL-SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------GQ 142 (282)
Q Consensus 76 kILLISHEL-s~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k------------~~ 142 (282)
||++|+++. ...|+...+.++++.|.+.|++|.+++...++... .|+++..-. ..
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~ 69 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP------------KAFELIQVPVKSHTNHGRNAEYY 69 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC------------TTCEEEECCCCCSSHHHHHHHHH
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCC------------CCcEEEEEccCcccchhhHHHHH
Confidence 699999984 55788999999999999999999999955322100 133332110 01
Q ss_pred hHHH---HhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc--------------cccccccccccc
Q 023401 143 ETIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK--------------LDYVKHLPLVAG 205 (282)
Q Consensus 143 ~~i~---~a~~~DLVIaNT~v~g~wl~~l~~~~~~~~~~pVIWWIHE~r~~Yf~--------------l~~vkhL~~v~~ 205 (282)
..+. ...++|+|+++....+..+... .... ..|.+++.|.....+.. ..+.+++.++
T Consensus 70 ~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~-- 143 (374)
T 2iw1_A 70 AWVQNHLKEHPADRVVGFNKMPGLDVYFA---ADVC-YAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMML-- 143 (374)
T ss_dssp HHHHHHHHHSCCSEEEESSCCTTCSEEEC---CSCC-HHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEES--
T ss_pred HHHHHHHhccCCCEEEEecCCCCceeeec---cccc-cceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEc--
Confidence 1111 2346999998764221100000 0000 01333333432211110 1134556666
Q ss_pred ccccchhhHHHHHHhhh-hhcCCCCCCeeEEEecCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccc
Q 023401 206 AMIDSHVTAEYWKNRTR-ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINRH 279 (282)
Q Consensus 206 ~~~dS~Ata~~w~~~~~-~~l~Ikl~~~~vv~L~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~~~s~ 279 (282)
|+.+++++.+.++ +..++ .+++-+...+... .......|+.+|+++|++++..+|+.+.+.
T Consensus 144 ----s~~~~~~~~~~~~~~~~~~-----~vi~ngv~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~ 205 (374)
T 2iw1_A 144 ----TDKQIADFQKHYQTEPERF-----QILPPGIYPDRKY----SEQIPNSREIYRQKNGIKEQQNLLLQVGSD 205 (374)
T ss_dssp ----CHHHHHHHHHHHCCCGGGE-----EECCCCCCGGGSG----GGSCTTHHHHHHHHTTCCTTCEEEEEECSC
T ss_pred ----CHHHHHHHHHHhCCChhhe-----EEecCCcCHHhcC----cccchhHHHHHHHHhCCCCCCeEEEEeccc
Confidence 9999999988764 22222 3344444433222 111112467789999999999888777654
No 10
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.65 E-value=0.00024 Score=62.51 Aligned_cols=134 Identities=11% Similarity=0.078 Sum_probs=78.1
Q ss_pred cEEEEEeccCC--CCCchHHHHHHHHHHHhCCCeEEEEeccCCCC-chh-------hh-hhhHHHHHHcCCceeehhchh
Q 023401 75 KLVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSE-EDE-------VI-YSLEHKMWDRGVQVISAKGQE 143 (282)
Q Consensus 75 KkILLISHELs--~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-~~~-------v~-~~L~~kll~rgI~v~~~k~~~ 143 (282)
+||++|++... .+|+...+.++++.|.+.|++|.+++...++. ..+ +. .+......+... ......
T Consensus 21 MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 97 (406)
T 2gek_A 21 MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRF---GPATHR 97 (406)
T ss_dssp CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------C---CHHHHH
T ss_pred ceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccc---cHHHHH
Confidence 57999998753 36888999999999999999999999655431 000 00 000000000000 000111
Q ss_pred HHH---HhhccCEEEEechhchHHHHHHhh-ccCCCCCCceEEEeeeccccccc-----------ccccccccccccccc
Q 023401 144 TIN---TALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGHYFK-----------LDYVKHLPLVAGAMI 208 (282)
Q Consensus 144 ~i~---~a~~~DLVIaNT~v~g~wl~~l~~-~~~~~~~~pVIWWIHE~r~~Yf~-----------l~~vkhL~~v~~~~~ 208 (282)
.+. ...++|+|+++......+...+.+ .+ .|+|+++|+....... +++++++.++
T Consensus 98 ~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~----- 167 (406)
T 2gek_A 98 KVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAE-----GPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAV----- 167 (406)
T ss_dssp HHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEE-----SSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEES-----
T ss_pred HHHHHHHhcCCCEEEECCccchHHHHHHHHhcC-----CCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEEC-----
Confidence 121 234799999998766544222221 13 3999999996422100 2445555566
Q ss_pred cchhhHHHHHHhhh
Q 023401 209 DSHVTAEYWKNRTR 222 (282)
Q Consensus 209 dS~Ata~~w~~~~~ 222 (282)
|+.+++++.+.++
T Consensus 168 -s~~~~~~~~~~~~ 180 (406)
T 2gek_A 168 -SDLARRWQMEALG 180 (406)
T ss_dssp -SHHHHHHHHHHHS
T ss_pred -CHHHHHHHHHhcC
Confidence 9999999987654
No 11
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.61 E-value=0.00011 Score=65.33 Aligned_cols=166 Identities=12% Similarity=0.090 Sum_probs=88.3
Q ss_pred CCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----------eh-----hchhHHH---
Q 023401 85 SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----------SA-----KGQETIN--- 146 (282)
Q Consensus 85 s~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----------~~-----k~~~~i~--- 146 (282)
+..|+...+.+|++.|.+.|++|.+++...+....+ ...|+.+. .. .....+.
T Consensus 25 ~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 95 (394)
T 2jjm_A 25 SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK---------VYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVA 95 (394)
T ss_dssp --CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C---------CCTTEEEECCCCC----CCSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc---------cCCceEEEecccccccccccccccHHHHHHHHHHH
Confidence 467899999999999999999999999654321000 00111111 00 0011111
Q ss_pred HhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc------------ccccccccccccccccchhhH
Q 023401 147 TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK------------LDYVKHLPLVAGAMIDSHVTA 214 (282)
Q Consensus 147 ~a~~~DLVIaNT~v~g~wl~~l~~~~~~~~~~pVIWWIHE~r~~Yf~------------l~~vkhL~~v~~~~~dS~Ata 214 (282)
...++|+|++++.....+...+.+..... ..|+|+++|+..-.+.. +++.+++.++ |+.++
T Consensus 96 ~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~------s~~~~ 168 (394)
T 2jjm_A 96 QRENLDILHVHYAIPHAICAYLAKQMIGE-RIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAV------SHSLI 168 (394)
T ss_dssp HHHTCSEEEECSSTTHHHHHHHHHHHTTT-CSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEES------CHHHH
T ss_pred HHcCCCEEEEcchhHHHHHHHHHHHhhcC-CCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEEC------CHHHH
Confidence 24679999999754332222222111111 13999999995421111 2344556666 99999
Q ss_pred HHHHHhhhhhcCCCCCCeeEEEecCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccc
Q 023401 215 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINRH 279 (282)
Q Consensus 215 ~~w~~~~~~~l~Ikl~~~~vv~L~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~~~s~ 279 (282)
+++.+....+. +..+++-+...+... . ..++..|+++|++++..+|+.+...
T Consensus 169 ~~~~~~~~~~~-----~~~vi~ngv~~~~~~----~----~~~~~~~~~~~~~~~~~~i~~~G~~ 220 (394)
T 2jjm_A 169 NETHELVKPNK-----DIQTVYNFIDERVYF----K----RDMTQLKKEYGISESEKILIHISNF 220 (394)
T ss_dssp HHHHHHTCCSS-----CEEECCCCCCTTTCC----C----CCCHHHHHHTTCC---CEEEEECCC
T ss_pred HHHHHhhCCcc-----cEEEecCCccHHhcC----C----cchHHHHHHcCCCCCCeEEEEeecc
Confidence 99887764321 223344443332211 0 1245677889998777777666543
No 12
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.29 E-value=0.0031 Score=56.16 Aligned_cols=175 Identities=15% Similarity=0.168 Sum_probs=93.5
Q ss_pred cEEEEEeccCCC-CCchHHHHHHHHHHHhCCCeEEEEeccCCC-Cc-hhhh-hhhHHHHHHcCCc--eeehh-chhHHHH
Q 023401 75 KLVLLVSHELSL-SGGPLLLMELAFLLRGVGTKVNWITIQKPS-EE-DEVI-YSLEHKMWDRGVQ--VISAK-GQETINT 147 (282)
Q Consensus 75 KkILLISHELs~-TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~-~~v~-~~L~~kll~rgI~--v~~~k-~~~~i~~ 147 (282)
.||++|+..... +|+.....+|++.|.+. ++|.+++....+ .. .... ++.......+... -+... -.+.+ .
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~ 78 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFI-D 78 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHHH-H
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHHH-H
Confidence 368999876654 57789999999999999 999999844332 00 0000 0000100111111 11111 11222 2
Q ss_pred hhccCEEEEechhc--hHHHHHHhhccCCCCCCceEEEeeeccccccc-----ccccc--cccccccccccchhhHHHHH
Q 023401 148 ALKADLIVLNTAVA--GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVK--HLPLVAGAMIDSHVTAEYWK 218 (282)
Q Consensus 148 a~~~DLVIaNT~v~--g~wl~~l~~~~~~~~~~pVIWWIHE~r~~Yf~-----l~~vk--hL~~v~~~~~dS~Ata~~w~ 218 (282)
..++|+|+++.-.. +.++..+ .++|.. .+++.+.|.....+.. +++.. +++++ |+.+++++.
T Consensus 79 ~~~~Div~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~------S~~~~~~~~ 149 (413)
T 3oy2_A 79 VHKPDIVMIYNDPIVIGNYLLAM--GKCSHR-TKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAM------SKCWISDIC 149 (413)
T ss_dssp HHCCSEEEEEECHHHHHHHHHHG--GGCCSC-CEEEEEECCCSBSCCGGGGGGGGCTTEEEEEES------STHHHHHHH
T ss_pred hcCCCEEEEcchHHHHHHHHHHh--ccCCCC-CceeeeccccchhhHHHHHHHHhccCCceEEEc------CHHHHHHHH
Confidence 56899999995432 2333333 234433 3778888876533222 33323 55555 999999988
Q ss_pred HhhhhhcCCCCCCeeEEEecCcHHHHHHHHHHHHHHHHHHHHHHHhCCCC--CCEEEEEeccc
Q 023401 219 NRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN--EDLLFAIINRH 279 (282)
Q Consensus 219 ~~~~~~l~Ikl~~~~vv~L~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~--dd~lv~~~~s~ 279 (282)
+ .+.+. +..+++-+...+.. +..|+++|+++ +..+|+.+...
T Consensus 150 ~-~~~~~-----~~~vi~ngvd~~~~-------------~~~~~~~~~~~~~~~~~il~vGr~ 193 (413)
T 3oy2_A 150 N-YGCKV-----PINIVSHFVDTKTI-------------YDARKLVGLSEYNDDVLFLNMNRN 193 (413)
T ss_dssp H-TTCCS-----CEEECCCCCCCCCC-------------TTHHHHTTCGGGTTSEEEECCSCS
T ss_pred H-cCCCC-----ceEEeCCCCCHHHH-------------HHHHHhcCCCcccCceEEEEcCCC
Confidence 7 32111 22333433322211 34566777777 67776665543
No 13
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.15 E-value=0.0072 Score=52.67 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=32.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
+||++++.. ..|+-...++||+.|++.|++|.+++..++
T Consensus 7 mkIl~~~~~--~gG~~~~~~~la~~L~~~G~~V~v~~~~~~ 45 (364)
T 1f0k_A 7 KRLMVMAGG--TGGHVFPGLAVAHHLMAQGWQVRWLGTADR 45 (364)
T ss_dssp CEEEEECCS--SHHHHHHHHHHHHHHHTTTCEEEEEECTTS
T ss_pred cEEEEEeCC--CccchhHHHHHHHHHHHcCCEEEEEecCCc
Confidence 689999843 337777788999999999999999996544
No 14
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=95.09 E-value=0.77 Score=40.08 Aligned_cols=34 Identities=15% Similarity=-0.032 Sum_probs=23.9
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCC-eEEEEe
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGT-KVNWIT 111 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~-~V~vL~ 111 (282)
+||++++.+.+- -..+..|++.|++.|. ++.++.
T Consensus 1 mkIl~v~~~~~~---~~~~~~l~~~L~~~g~~~~~v~~ 35 (384)
T 1vgv_A 1 MKVLTVFGTRPE---AIKMAPLVHALAKDPFFEAKVCV 35 (384)
T ss_dssp CEEEEEECSHHH---HHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CeEEEEecccHH---HHHHHHHHHHHHhCCCCceEEEE
Confidence 468888765322 2446789999999984 776655
No 15
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=93.61 E-value=0.52 Score=42.72 Aligned_cols=40 Identities=25% Similarity=0.426 Sum_probs=30.3
Q ss_pred ccccEEEEEeccCCCCCchHH-HHHHHHHHHhCCCeEEEEeccCC
Q 023401 72 MKSKLVLLVSHELSLSGGPLL-LMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLl-LleLA~~Lkq~G~~V~vL~~~~G 115 (282)
|+ |+||+. .+.||+=+. .+-+|+.|++.|++|.+++..+|
T Consensus 1 M~-~~i~i~---~GGTgGHi~palala~~L~~~g~~V~~vg~~~g 41 (365)
T 3s2u_A 1 MK-GNVLIM---AGGTGGHVFPALACAREFQARGYAVHWLGTPRG 41 (365)
T ss_dssp ---CEEEEE---CCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSS
T ss_pred CC-CcEEEE---cCCCHHHHHHHHHHHHHHHhCCCEEEEEECCch
Confidence 44 567776 467877654 67899999999999999987666
No 16
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=93.47 E-value=0.42 Score=42.29 Aligned_cols=51 Identities=24% Similarity=0.283 Sum_probs=36.6
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~ 137 (282)
.||++++.. ..|.-.-++.||+.|++.|++|.+++... ..+.+.+.|+++.
T Consensus 21 MrIl~~~~~--~~Gh~~~~~~la~~L~~~GheV~v~~~~~----------~~~~~~~~g~~~~ 71 (412)
T 3otg_A 21 MRVLFASLG--THGHTYPLLPLATAARAAGHEVTFATGEG----------FAGTLRKLGFEPV 71 (412)
T ss_dssp CEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEECGG----------GHHHHHHTTCEEE
T ss_pred eEEEEEcCC--CcccHHHHHHHHHHHHHCCCEEEEEccHH----------HHHHHHhcCCcee
Confidence 479999843 33555557899999999999999998431 2455555666665
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=92.98 E-value=0.46 Score=42.28 Aligned_cols=50 Identities=18% Similarity=0.259 Sum_probs=36.1
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 023401 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 76 kILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~ 137 (282)
||+|++.- ..|--.-++.|++.|++.|++|.+++.. ...+.+.+.|++++
T Consensus 17 rIl~~~~~--~~gh~~~~~~La~~L~~~GheV~v~~~~----------~~~~~~~~~G~~~~ 66 (398)
T 4fzr_A 17 RILVIAGC--SEGFVMPLVPLSWALRAAGHEVLVAASE----------NMGPTVTGAGLPFA 66 (398)
T ss_dssp EEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEEEG----------GGHHHHHHTTCCEE
T ss_pred EEEEEcCC--CcchHHHHHHHHHHHHHCCCEEEEEcCH----------HHHHHHHhCCCeeE
Confidence 79999853 3455555789999999999999999842 12455566666655
No 18
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=92.53 E-value=0.57 Score=41.04 Aligned_cols=51 Identities=16% Similarity=0.270 Sum_probs=38.2
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~ 137 (282)
++||+++.- ..|-=.-++.||+.|++.|++|.+++.. ...+.+...|+++.
T Consensus 5 ~~il~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~~----------~~~~~~~~~G~~~~ 55 (402)
T 3ia7_A 5 RHILFANVQ--GHGHVYPSLGLVSELARRGHRITYVTTP----------LFADEVKAAGAEVV 55 (402)
T ss_dssp CEEEEECCS--SHHHHHHHHHHHHHHHHTTCEEEEEECH----------HHHHHHHHTTCEEE
T ss_pred CEEEEEeCC--CCcccccHHHHHHHHHhCCCEEEEEcCH----------HHHHHHHHcCCEEE
Confidence 589999864 3466677889999999999999999931 23455666677665
No 19
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.38 E-value=0.28 Score=40.75 Aligned_cols=89 Identities=15% Similarity=0.193 Sum_probs=46.6
Q ss_pred CccccccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCC-ce
Q 023401 58 SVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV-QV 136 (282)
Q Consensus 58 ~~~~~~~~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI-~v 136 (282)
+++..++++.+..-++||+||+++ -||. +=.++++.|.+.|++|.++..+.. . .+++.+.++ .+
T Consensus 5 ~~~~~~~~~~~~~~l~~~~ilVtG----atG~--iG~~l~~~L~~~G~~V~~~~R~~~----~-----~~~~~~~~~~~~ 69 (236)
T 3e8x_A 5 HHHHHHSSGRENLYFQGMRVLVVG----ANGK--VARYLLSELKNKGHEPVAMVRNEE----Q-----GPELRERGASDI 69 (236)
T ss_dssp ----------------CCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESSGG----G-----HHHHHHTTCSEE
T ss_pred cccccccccccccCcCCCeEEEEC----CCCh--HHHHHHHHHHhCCCeEEEEECChH----H-----HHHHHhCCCceE
Confidence 444445555666678899988763 3333 566888999999999998884322 1 234555566 55
Q ss_pred eehhchhHHH-HhhccCEEEEechhc
Q 023401 137 ISAKGQETIN-TALKADLIVLNTAVA 161 (282)
Q Consensus 137 ~~~k~~~~i~-~a~~~DLVIaNT~v~ 161 (282)
+..--.+.+. ....+|.||.|....
T Consensus 70 ~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 70 VVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp EECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred EEcccHHHHHHHHcCCCEEEECCCCC
Confidence 5321113332 456899999888754
No 20
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=91.67 E-value=0.92 Score=40.02 Aligned_cols=53 Identities=17% Similarity=0.213 Sum_probs=38.3
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.||+|++.. ..|--.-++.|++.|++.|++|.+++.. ...+.+...|++++.-
T Consensus 2 MrIl~~~~~--~~gh~~~~~~la~~L~~~GheV~v~~~~----------~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 2 MRVLVVPLP--YPTHLMAMVPLCWALQASGHEVLIAAPP----------ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CEEEEECCS--CHHHHHTTHHHHHHHHHTTCEEEEEECH----------HHHHHHHHBTCEEEEC
T ss_pred cEEEEEcCC--CcchhhhHHHHHHHHHHCCCEEEEecCh----------hhHHHHHhCCCceeee
Confidence 479999864 4466566788999999999999999831 2345566667766644
No 21
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=91.49 E-value=1.1 Score=38.82 Aligned_cols=38 Identities=8% Similarity=-0.087 Sum_probs=25.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhC-C-CeEEEEecc
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGV-G-TKVNWITIQ 113 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~-G-~~V~vL~~~ 113 (282)
+.+||++++.+.+-.| ....+++.|++. | +++++++..
T Consensus 7 ~~mkIl~v~~~~~~~~---~~~~l~~~L~~~~~~~~v~~~~~~ 46 (375)
T 3beo_A 7 ERLKVMTIFGTRPEAI---KMAPLVLELQKHPEKIESIVTVTA 46 (375)
T ss_dssp SCEEEEEEECSHHHHH---HHHHHHHHHTTCTTTEEEEEEECC
T ss_pred cCceEEEEecCcHHHH---HHHHHHHHHHhCCCCCCeEEEEcC
Confidence 3468999986654333 356788888876 4 777776643
No 22
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=91.21 E-value=0.99 Score=44.14 Aligned_cols=86 Identities=20% Similarity=0.273 Sum_probs=57.5
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-----CCceeehhchh
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-----GVQVISAKGQE 143 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-----gI~v~~~k~~~ 143 (282)
..+..||+|.+. |.|-.+..|++.|.+.|.+++.+....++ .+.-..+ +++++. +..++......
T Consensus 355 ~~~l~Gkrv~i~-------gd~~~~~~la~~L~ElGm~vv~v~~~~~~--~~~~~~~-~~ll~~~~~~~~~~v~~~~d~~ 424 (519)
T 1qgu_B 355 HTWLHGKKFGLY-------GDPDFVMGLTRFLLELGCEPTVILSHNAN--KRWQKAM-NKMLDASPYGRDSEVFINCDLW 424 (519)
T ss_dssp HHHHTTCEEEEE-------SCHHHHHHHHHHHHHTTCEEEEEEETTCC--HHHHHHH-HHHHHHSTTCTTCEEEESCCHH
T ss_pred HHHcCCCEEEEE-------CCchHHHHHHHHHHHCCCEEEEEEeCCCC--HHHHHHH-HHHHHhcCCCCCCEEEECCCHH
Confidence 357899999987 46889999999999999999877755553 2221222 233332 46677654444
Q ss_pred HHH---HhhccCEEEEechhchHHHH
Q 023401 144 TIN---TALKADLIVLNTAVAGKWLD 166 (282)
Q Consensus 144 ~i~---~a~~~DLVIaNT~v~g~wl~ 166 (282)
.+. ...++||+|.|+- ++++.
T Consensus 425 ~l~~~i~~~~pDLiig~~~--~~~~a 448 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNSY--GKFIQ 448 (519)
T ss_dssp HHHHHHHHHCCSEEEECGG--GHHHH
T ss_pred HHHHHHhhcCCCEEEECcc--hHHHH
Confidence 333 2456999999986 35554
No 23
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=90.80 E-value=1.3 Score=39.50 Aligned_cols=36 Identities=31% Similarity=0.283 Sum_probs=29.1
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
.||+|++.. ..|--.-++.||+.|++.|++|.+++.
T Consensus 21 MrIl~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 21 MRVLFVSSP--GIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCC--CcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 479999863 345445578999999999999999986
No 24
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=89.58 E-value=0.65 Score=42.74 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=59.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHHHHhh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~ 149 (282)
+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+........+....
T Consensus 146 ~~~vvVI-------GgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig~~~ 218 (385)
T 3klj_A 146 KGKAFII-------GGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLI 218 (385)
T ss_dssp HSCEEEE-------CCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCHHHH
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcCeEE
Confidence 7889988 44456789999999999999998744322 244555567778888899998775544433345
Q ss_pred ccCEEEEechhc
Q 023401 150 KADLIVLNTAVA 161 (282)
Q Consensus 150 ~~DLVIaNT~v~ 161 (282)
.+|+||..|-..
T Consensus 219 ~~D~vv~a~G~~ 230 (385)
T 3klj_A 219 RSSCVITAVGVK 230 (385)
T ss_dssp HHSEEEECCCEE
T ss_pred ecCeEEECcCcc
Confidence 699999987654
No 25
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.45 E-value=4.5 Score=39.10 Aligned_cols=38 Identities=26% Similarity=0.304 Sum_probs=31.0
Q ss_pred ccEEEEEeccCC---CCCc-hHHHHHHHHHHHhCCCeEEEEe
Q 023401 74 SKLVLLVSHELS---LSGG-PLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 74 ~KkILLISHELs---~TGA-PLlLleLA~~Lkq~G~~V~vL~ 111 (282)
-.|||+||-|.. -||+ ==+.-.|.+.|.+.|++|.+++
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~ 50 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVIS 50 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence 357999999964 3555 2367899999999999999997
No 26
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=88.24 E-value=0.94 Score=43.01 Aligned_cols=97 Identities=19% Similarity=0.219 Sum_probs=60.0
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHH-HhCCCeEEEEeccCCCCchhhhhhhHHHHHH--cCCceeehhchhHH
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLL-RGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQVISAKGQETI 145 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~L-kq~G~~V~vL~~~~G~~~~~v~~~L~~kll~--rgI~v~~~k~~~~i 145 (282)
..+.+||++.+. |.|-....+++.| ++.|.+|+.+....+.. +. .++.+.. .++.+..+.....+
T Consensus 302 ~~~l~Gkrv~i~-------g~~~~~~~l~~~L~~elG~~vv~~~~~~~~~--~~---~~~~l~~l~~~~~v~~~~d~~e~ 369 (437)
T 3aek_A 302 LETLTGKSLFMF-------PDSQLEIPLARFLARECGMKTTEIATPFLHK--AI---MAPDLALLPSNTALTEGQDLEAQ 369 (437)
T ss_dssp HHHHTTCEEEEC-------SSSSCHHHHHHHHHHTTCCEEEEEEESCCCH--HH---HHHHHTTSBTTCEEEEECCHHHH
T ss_pred HHHhCCCEEEEE-------cCchHHHHHHHHHHHHcCCEEEEEEecCCCH--HH---HHHHHHhcCCCCEEEeCCCHHHH
Confidence 457889999986 3456889999999 99999999988644421 11 1222322 35666644323222
Q ss_pred -H--HhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeee
Q 023401 146 -N--TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHE 186 (282)
Q Consensus 146 -~--~a~~~DLVIaNT~v~g~wl~~l~~~~~~~~~~pVIWWIHE 186 (282)
+ ...++||+|.|+.....+ .+..+ |+.|-++.
T Consensus 370 ~~~i~~~~pDliig~~~~~~p~----~~~G~-----P~~d~~~~ 404 (437)
T 3aek_A 370 LDRHEAINPDLTVCGLGLANPL----EAKGH-----ATKWAIEL 404 (437)
T ss_dssp HHHHHHHCCSEEEECHHHHHHH----HTTTC-----CEEEGGGG
T ss_pred HHHHhccCCCEEEeCCccccHH----HHCCC-----CEEeecCC
Confidence 2 356799999998754332 22344 77765444
No 27
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=88.04 E-value=2.3 Score=37.81 Aligned_cols=51 Identities=20% Similarity=0.267 Sum_probs=37.1
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~ 137 (282)
++|+|++.- ..|-=.-++.||+.|++.|++|.+++.. ...+.+.+.|+++.
T Consensus 21 ~rIl~~~~~--~~GHv~p~l~La~~L~~~Gh~V~v~~~~----------~~~~~~~~~G~~~~ 71 (415)
T 3rsc_A 21 AHLLIVNVA--SHGLILPTLTVVTELVRRGHRVSYVTAG----------GFAEPVRAAGATVV 71 (415)
T ss_dssp CEEEEECCS--CHHHHGGGHHHHHHHHHTTCEEEEEECG----------GGHHHHHHTTCEEE
T ss_pred CEEEEEeCC--CccccccHHHHHHHHHHCCCEEEEEeCH----------HHHHHHHhcCCEEE
Confidence 589999863 3455566789999999999999999922 12455566676665
No 28
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=87.83 E-value=2.7 Score=39.08 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=52.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHH--HHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh--chhHHH--
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFL--LRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--GQETIN-- 146 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~--Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k--~~~~i~-- 146 (282)
+..||+++++++...|.--+++++++. |...|++|++++...+ ..+. +.+++...+ ....-. ....+.
T Consensus 204 ~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~-~~~~----~~~~~~~~~-~~~~~~~~~~~~l~~~ 277 (568)
T 2vsy_A 204 GPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGD-DGST----LRTRLAQAS-TLHDVTALGHLATAKH 277 (568)
T ss_dssp SCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCC-CSCH----HHHHHHHTS-EEEECTTCCHHHHHHH
T ss_pred CCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCC-CccH----HHHHHHhcC-eEEECCCCCHHHHHHH
Confidence 345899999999888888999999999 8888999999985422 1222 244555545 332211 112221
Q ss_pred -HhhccCEEEEec
Q 023401 147 -TALKADLIVLNT 158 (282)
Q Consensus 147 -~a~~~DLVIaNT 158 (282)
...++|+|+..+
T Consensus 278 i~~~~~Div~~~~ 290 (568)
T 2vsy_A 278 IRHHGIDLLFDLR 290 (568)
T ss_dssp HHHTTCSEEEECS
T ss_pred HHhCCCCEEEECC
Confidence 356799999754
No 29
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=87.62 E-value=2.7 Score=38.92 Aligned_cols=79 Identities=23% Similarity=0.247 Sum_probs=48.6
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-------- 141 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~-------- 141 (282)
.||+..||+|. |.|=+-....+.|.+.|++|+.+..+-..... -.++.+..++.|||++.-..
T Consensus 18 ~~~~~mrIvf~-------G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~--~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 88 (329)
T 2bw0_A 18 LYFQSMKIAVI-------GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGK--ADPLGLEAEKDGVPVFKYSRWRAKGQAL 88 (329)
T ss_dssp ---CCCEEEEE-------CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSC--CCHHHHHHHHHTCCEEECSCCEETTEEC
T ss_pred ccCCCCEEEEE-------cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCC--CCHHHHHHHHcCCCEEecCccccccccc
Confidence 45666788888 56766666777888889998877753211011 12446777888999985321
Q ss_pred hhHHH--HhhccCEEEEe
Q 023401 142 QETIN--TALKADLIVLN 157 (282)
Q Consensus 142 ~~~i~--~a~~~DLVIaN 157 (282)
.+.++ ...++|+||+-
T Consensus 89 ~~~~~~l~~~~~Dliv~a 106 (329)
T 2bw0_A 89 PDVVAKYQALGAELNVLP 106 (329)
T ss_dssp HHHHHHHHTTCCSEEEES
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 22222 25679999874
No 30
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=87.53 E-value=0.98 Score=42.72 Aligned_cols=110 Identities=19% Similarity=0.220 Sum_probs=61.5
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC--CchhhhhhhHHHHHHc---CCceeehhchh
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS--EEDEVIYSLEHKMWDR---GVQVISAKGQE 143 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~--~~~~v~~~L~~kll~r---gI~v~~~k~~~ 143 (282)
..+.+||+|.+. |.|.....+++.|++.|.+|+.+.....+ .+..+..-+++...+. +..++.+....
T Consensus 312 ~~~l~GKrv~i~-------g~~~~~~~la~~L~elGm~vv~~gt~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~d~~ 384 (460)
T 2xdq_A 312 LELVRGKSVFFM-------GDNLLEISLARFLIRCGMRVLEIGIPYMDKRYQAAELALLSQTCAEMGHPLPTIVEKPDNY 384 (460)
T ss_dssp HHHHTTCEEEEC-------CCSSCHHHHHHHHHHTTCEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCCCEEEESCCHH
T ss_pred HHHhcCCEEEEE-------CCchHHHHHHHHHHHCCCEEEEeCCCCCChhHHHHHHHHHHHHHHhhCCCCcEEEECCCHH
Confidence 357899999985 34567888999999999999986643111 1111111122222222 34566543333
Q ss_pred HHH---HhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeecccccccc
Q 023401 144 TIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL 194 (282)
Q Consensus 144 ~i~---~a~~~DLVIaNT~v~g~wl~~l~~~~~~~~~~pVIWWIHE~r~~Yf~l 194 (282)
.+. ...++||+|.|+--... +.+..+ |+.|-+++.+..|..+
T Consensus 385 el~~~i~~~~pDL~ig~~~~~~~----~~r~G~-----P~~d~~~~~~~p~~Gy 429 (460)
T 2xdq_A 385 NQLQRIKALQPDLVITGMAHANP----LEARGI-----STKWSVEFTFAQIHGF 429 (460)
T ss_dssp HHHHHHHHHCCSEEEECHHHHHH----HHTBTC-----CEEETTHHHHSCCBSG
T ss_pred HHHHHHhccCCCEEEeCcccCce----eeeccC-----cEEEecCceecCcccH
Confidence 332 34689999988443322 222344 7776555433344443
No 31
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=87.40 E-value=2.6 Score=41.34 Aligned_cols=86 Identities=19% Similarity=0.237 Sum_probs=55.7
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH--c--CCceeehhchhHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--R--GVQVISAKGQETI 145 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~--r--gI~v~~~k~~~~i 145 (282)
.+..||+|.+. |.|-....|++.|.+.|.+++.+....+. .+.-.-+.+.+.+ . +..++.+.....+
T Consensus 360 ~~l~GKrvaI~-------gd~~~~~~la~fL~elGm~vv~v~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l 430 (523)
T 3u7q_B 360 TWLHGKRFALW-------GDPDFVMGLVKFLLELGCEPVHILCHNGN--KRWKKAVDAILAASPYGKNATVYIGKDLWHL 430 (523)
T ss_dssp HHHTTCEEEEE-------CSHHHHHHHHHHHHHTTCEEEEEEETTCC--HHHHHHHHHHHHTSGGGTTCEEEESCCHHHH
T ss_pred HhcCCCEEEEE-------CCchHHHHHHHHHHHcCCEEEEEEeCCCC--HHHHHHHHHHHhhccCCCCcEEEECCCHHHH
Confidence 56889999985 67889999999999999998888755443 2221122223322 1 3456554333333
Q ss_pred H---HhhccCEEEEechhchHHHH
Q 023401 146 N---TALKADLIVLNTAVAGKWLD 166 (282)
Q Consensus 146 ~---~a~~~DLVIaNT~v~g~wl~ 166 (282)
. ...++||||.|+= ++++.
T Consensus 431 ~~~i~~~~pDLlig~s~--~k~~a 452 (523)
T 3u7q_B 431 RSLVFTDKPDFMIGNSY--GKFIQ 452 (523)
T ss_dssp HHHHHHTCCSEEEECTT--HHHHH
T ss_pred HHHHHhcCCCEEEECcc--HHHHH
Confidence 3 2567999999985 34444
No 32
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=86.97 E-value=1.2 Score=39.27 Aligned_cols=72 Identities=21% Similarity=0.195 Sum_probs=48.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeehhchhHHHHhhc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISAKGQETINTALK 150 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~k~~~~i~~a~~ 150 (282)
++||+||+| |+--+-...++.|.+.|++|.++..+ ...++ .++.+ -++..+...+... .+.+
T Consensus 29 L~gk~VLVV-------GgG~va~~ka~~Ll~~GA~VtVvap~---~~~~l-----~~l~~~~~i~~i~~~~~~~--dL~~ 91 (223)
T 3dfz_A 29 LKGRSVLVV-------GGGTIATRRIKGFLQEGAAITVVAPT---VSAEI-----NEWEAKGQLRVKRKKVGEE--DLLN 91 (223)
T ss_dssp CTTCCEEEE-------CCSHHHHHHHHHHGGGCCCEEEECSS---CCHHH-----HHHHHTTSCEEECSCCCGG--GSSS
T ss_pred cCCCEEEEE-------CCCHHHHHHHHHHHHCCCEEEEECCC---CCHHH-----HHHHHcCCcEEEECCCCHh--HhCC
Confidence 678999998 33346678888999999999999833 22222 33333 3566665433322 3578
Q ss_pred cCEEEEechh
Q 023401 151 ADLIVLNTAV 160 (282)
Q Consensus 151 ~DLVIaNT~v 160 (282)
+|+||+.|-.
T Consensus 92 adLVIaAT~d 101 (223)
T 3dfz_A 92 VFFIVVATND 101 (223)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999854
No 33
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.70 E-value=2.6 Score=39.66 Aligned_cols=88 Identities=16% Similarity=0.199 Sum_probs=56.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhc-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK- 150 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~- 150 (282)
++||+|++|.- +.+| |.+|++|++.|++|.+.=.+.. . ..+..+++.+.||++........ ...+
T Consensus 7 ~~~k~v~viG~--G~sG-----~s~A~~l~~~G~~V~~~D~~~~-~----~~~~~~~L~~~gi~~~~g~~~~~--~~~~~ 72 (451)
T 3lk7_A 7 FENKKVLVLGL--ARSG-----EAAARLLAKLGAIVTVNDGKPF-D----ENPTAQSLLEEGIKVVCGSHPLE--LLDED 72 (451)
T ss_dssp TTTCEEEEECC--TTTH-----HHHHHHHHHTTCEEEEEESSCG-G----GCHHHHHHHHTTCEEEESCCCGG--GGGSC
T ss_pred cCCCEEEEEee--CHHH-----HHHHHHHHhCCCEEEEEeCCcc-c----CChHHHHHHhCCCEEEECCChHH--hhcCC
Confidence 47899999974 4444 3569999999999987643211 0 12345678888999885433221 2345
Q ss_pred cCEEEEechhc--hHHHHHHhhccC
Q 023401 151 ADLIVLNTAVA--GKWLDAVLKEDV 173 (282)
Q Consensus 151 ~DLVIaNT~v~--g~wl~~l~~~~~ 173 (282)
+|+||.++.+. .+.+.+..+...
T Consensus 73 ~d~vv~spgi~~~~p~~~~a~~~gi 97 (451)
T 3lk7_A 73 FCYMIKNPGIPYNNPMVKKALEKQI 97 (451)
T ss_dssp EEEEEECTTSCTTSHHHHHHHHTTC
T ss_pred CCEEEECCcCCCCChhHHHHHHCCC
Confidence 99999999884 344444443333
No 34
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=86.68 E-value=3 Score=39.75 Aligned_cols=86 Identities=17% Similarity=0.313 Sum_probs=55.7
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC---CceeehhchhHHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG---VQVISAKGQETIN 146 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rg---I~v~~~k~~~~i~ 146 (282)
.+.+||+|.+.. .|-....+++.|++.|.+++.+....++ .+.-..+++.+.+.+ ..++.......+.
T Consensus 308 ~~l~gkrv~i~~-------~~~~~~~l~~~L~elG~~vv~v~~~~~~--~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~ 378 (458)
T 1mio_B 308 QYLQGKKVALLG-------DPDEIIALSKFIIELGAIPKYVVTGTPG--MKFQKEIDAMLAEAGIEGSKVKVEGDFFDVH 378 (458)
T ss_dssp HHHTTCEEEEEE-------CHHHHHHHHHHHHTTTCEEEEEEESSCC--HHHHHHHHHHHHTTTCCSCEEEESCBHHHHH
T ss_pred HHcCCCEEEEEc-------CchHHHHHHHHHHHCCCEEEEEEeCCCC--HHHHHHHHHHHHhcCCCCCEEEECCCHHHHH
Confidence 467899998764 5778999999999999999887755543 222112222233333 3566554444443
Q ss_pred ---HhhccCEEEEechhchHHHH
Q 023401 147 ---TALKADLIVLNTAVAGKWLD 166 (282)
Q Consensus 147 ---~a~~~DLVIaNT~v~g~wl~ 166 (282)
...++|++|.|+- ++++.
T Consensus 379 ~~i~~~~pDl~ig~~~--~~~~a 399 (458)
T 1mio_B 379 QWIKNEGVDLLISNTY--GKFIA 399 (458)
T ss_dssp HHHHHSCCSEEEESGG--GHHHH
T ss_pred HHHHhcCCCEEEeCcc--hHHHH
Confidence 2457999999986 45554
No 35
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=86.63 E-value=1.1 Score=34.79 Aligned_cols=73 Identities=21% Similarity=0.214 Sum_probs=32.5
Q ss_pred eccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhh-hhHHHHHHcCCc-e-eehhchhHHH-HhhccCEEEE
Q 023401 81 SHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY-SLEHKMWDRGVQ-V-ISAKGQETIN-TALKADLIVL 156 (282)
Q Consensus 81 SHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~-~L~~kll~rgI~-v-~~~k~~~~i~-~a~~~DLVIa 156 (282)
||-+||||++.+ +--+ -..+. ++|..|-....+.. -+++.+.++|++ + +.......+. ...++|+||.
T Consensus 2 ~~~~~~~~~~~~--~~~~-----~~kIl-vvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~~~~~~~~~DlIi~ 73 (110)
T 3czc_A 2 SHMASMTGGQQM--GRGS-----MVKVL-TACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAKGLASNYDIVVA 73 (110)
T ss_dssp -----------------------CEEEE-EECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHHHHHHGGGCSEEEE
T ss_pred cchhhccccccc--cccC-----CcEEE-EECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHHHhhccCCCcEEEE
Confidence 799999988762 1111 12344 44555543444544 555666677887 4 4444444443 3578999998
Q ss_pred echhc
Q 023401 157 NTAVA 161 (282)
Q Consensus 157 NT~v~ 161 (282)
-+-+.
T Consensus 74 t~~l~ 78 (110)
T 3czc_A 74 SNHLI 78 (110)
T ss_dssp ETTTG
T ss_pred CCchH
Confidence 87654
No 36
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=85.99 E-value=4.2 Score=34.32 Aligned_cols=90 Identities=4% Similarity=0.077 Sum_probs=50.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
++|+|.+|.++.+..=-.-++-.+-..+++.|+++.+.....++.+.+. ...+.+ ...++|
T Consensus 3 ~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~--~~i~~l-----------------~~~~vd 63 (305)
T 3g1w_A 3 LNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQI--TVLEQA-----------------IAKNPA 63 (305)
T ss_dssp --CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHH--HHHHHH-----------------HHHCCS
T ss_pred CCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHH--HHHHHH-----------------HHhCCC
Confidence 5788999999876653444555666788888999988653333211111 111111 245678
Q ss_pred EEEEechhc---hHHHHHHhhccCCCCCCceEEEeee
Q 023401 153 LIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWWIHE 186 (282)
Q Consensus 153 LVIaNT~v~---g~wl~~l~~~~~~~~~~pVIWWIHE 186 (282)
.||+...-. ...++++.+.++ |+|.+=.+
T Consensus 64 giIi~~~~~~~~~~~~~~~~~~~i-----PvV~~~~~ 95 (305)
T 3g1w_A 64 GIAISAIDPVELTDTINKAVDAGI-----PIVLFDSG 95 (305)
T ss_dssp EEEECCSSTTTTHHHHHHHHHTTC-----CEEEESSC
T ss_pred EEEEcCCCHHHHHHHHHHHHHCCC-----cEEEECCC
Confidence 777765432 356666655555 66655443
No 37
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=85.79 E-value=3.3 Score=35.99 Aligned_cols=112 Identities=15% Similarity=0.037 Sum_probs=69.5
Q ss_pred ccccEEEEEeccCCCCCchH-HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhh------HHHHHH-cCCceeehhc-h
Q 023401 72 MKSKLVLLVSHELSLSGGPL-LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSL------EHKMWD-RGVQVISAKG-Q 142 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPL-lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L------~~kll~-rgI~v~~~k~-~ 142 (282)
+++|+|++- .+.++|-+ -..++++.|++.|++|+++..+.+.. ++.+. .+.+.. .|-++..+.. .
T Consensus 5 l~~k~I~lg---iTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~---~i~~~~~~~~~~~~l~~l~g~~v~~~~~~~ 78 (201)
T 3lqk_A 5 FAGKHVGFG---LTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQT---TDTKFGESSEWINKIKQITEEPIVDSMVKA 78 (201)
T ss_dssp CTTCEEEEE---CCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCC---TTCCTTCSCHHHHHHHHHCCSCCBCSHHHH
T ss_pred cCCCEEEEE---EEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHH---HHHHhhchhHHHHHHHHHhCCCeEeecCcc
Confidence 578888764 34455666 67899999999999999999776641 11111 223332 2555554321 1
Q ss_pred hHHHHhhccCEEEE-----echhc----------hHHHHHHhhccCCCCCCceEEEeeecccccccc
Q 023401 143 ETINTALKADLIVL-----NTAVA----------GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL 194 (282)
Q Consensus 143 ~~i~~a~~~DLVIa-----NT~v~----------g~wl~~l~~~~~~~~~~pVIWWIHE~r~~Yf~l 194 (282)
.-+.....+|++++ ||+.. ....+..++++. |+|--.-|+...|-.+
T Consensus 79 ~hi~~s~~aD~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~-----plvl~Pamn~~m~~h~ 140 (201)
T 3lqk_A 79 EPFGPKTPLDCMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGK-----PVVVGISTNDALGLNG 140 (201)
T ss_dssp GGGTTTSCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTC-----CEEEEEEETTTTTTTH
T ss_pred cccccccccCEEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCC-----CEEEEECCChhHHHhH
Confidence 22334567999885 55532 234444456666 8888888887777753
No 38
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=85.73 E-value=2.4 Score=41.38 Aligned_cols=79 Identities=15% Similarity=0.217 Sum_probs=50.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHH-HhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLL-RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~L-kq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (282)
.+..||+|.+. |.|.....+++.| ++.|.+|+.+........+ .+++.+.+.+..+........+.
T Consensus 276 ~~l~GKrv~i~-------gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~----~~~~~~~~~~~~v~i~~D~~el~~~ 344 (525)
T 3aek_B 276 TYLTGKRVFIF-------GDGTHVIAAARIAAKEVGFEVVGMGCYNREMAR----PLRTAAAEYGLEALITDDYLEVEKA 344 (525)
T ss_dssp GGGTTCEEEEC-------SSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHH----HHHHHHHHTTCCCEECSCHHHHHHH
T ss_pred hhcCCCEEEEE-------cCchHHHHHHHHHHHHcCCeeEEEecCchhHHH----HHHHHHHhcCCcEEEeCCHHHHHHH
Confidence 68899999863 6788899999999 8999999776654332212 22333343443333211122222
Q ss_pred -HhhccCEEEEech
Q 023401 147 -TALKADLIVLNTA 159 (282)
Q Consensus 147 -~a~~~DLVIaNT~ 159 (282)
...++||+|.|+-
T Consensus 345 i~~~~pDL~ig~~~ 358 (525)
T 3aek_B 345 IEAAAPELILGTQM 358 (525)
T ss_dssp HHHHCCSEEEECHH
T ss_pred HhhcCCCEEEecch
Confidence 3457999999985
No 39
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=85.03 E-value=3.6 Score=37.54 Aligned_cols=36 Identities=11% Similarity=0.069 Sum_probs=27.2
Q ss_pred ccEEEEEecc-CCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 74 SKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 74 ~KkILLISHE-Ls~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
.+||++|++. .- .|.+-.-..+++.|.+.| +|.+++
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~ 50 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFS 50 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEE
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEE
Confidence 4679999998 44 444445566788888889 999995
No 40
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=84.61 E-value=2.4 Score=41.21 Aligned_cols=82 Identities=16% Similarity=0.110 Sum_probs=54.0
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH---cCCceeehhchhHHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD---RGVQVISAKGQETIN 146 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~---rgI~v~~~k~~~~i~ 146 (282)
.+..||+|.+ .|.|...+.+++.|++.|.+|+.+....+. .++ .+++.+ .+..++++.....+.
T Consensus 344 ~~l~GKrv~i-------~g~~~~~~~la~~L~ElGm~vv~~gt~~~~-~~d-----~~~l~~~~~~~~~i~~~~d~~el~ 410 (492)
T 3u7q_A 344 PRLEGKRVML-------YIGGLRPRHVIGAYEDLGMEVVGTGYEFAH-NDD-----YDRTMKEMGDSTLLYDDVTGYEFE 410 (492)
T ss_dssp HHHTTCEEEE-------CBSSSHHHHTHHHHHTTTCEEEEEEESSCC-HHH-----HHHHHTTSCTTCEEEESCBHHHHH
T ss_pred HHhCCCEEEE-------ECCCchHHHHHHHHHHCCCEEEEEeCCCCC-HHH-----HHHHHHhCCCCcEEEcCCCHHHHH
Confidence 5789999987 345567889999999999999987755442 111 234433 245556543333332
Q ss_pred ---HhhccCEEEEechhchHHHH
Q 023401 147 ---TALKADLIVLNTAVAGKWLD 166 (282)
Q Consensus 147 ---~a~~~DLVIaNT~v~g~wl~ 166 (282)
...++||+|.|+- ++++.
T Consensus 411 ~~i~~~~pDL~ig~~~--~~~ia 431 (492)
T 3u7q_A 411 EFVKRIKPDLIGSGIK--EKFIF 431 (492)
T ss_dssp HHHHHHCCSEEEECHH--HHHHH
T ss_pred HHHHhcCCcEEEeCcc--hhHHH
Confidence 2567999999986 45544
No 41
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=84.54 E-value=4.9 Score=38.88 Aligned_cols=89 Identities=16% Similarity=0.249 Sum_probs=56.3
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhh
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~ 149 (282)
-|.++|+|.||+ ..|. -|--+|++|++.|++|...=.+..+ +..+++.+.||++..-..... ...
T Consensus 15 ~~~~~~~i~~iG----iGg~--Gms~lA~~l~~~G~~V~~sD~~~~~-------~~~~~L~~~gi~~~~G~~~~~--~~~ 79 (524)
T 3hn7_A 15 LYFQGMHIHILG----ICGT--FMGSLALLARALGHTVTGSDANIYP-------PMSTQLEQAGVTIEEGYLIAH--LQP 79 (524)
T ss_dssp ----CCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESCCCT-------THHHHHHHTTCEEEESCCGGG--GCS
T ss_pred eeecCCEEEEEE----ecHh--hHHHHHHHHHhCCCEEEEECCCCCc-------HHHHHHHHCCCEEECCCCHHH--cCC
Confidence 467889999885 2332 3445899999999998765433221 345678888999985432222 235
Q ss_pred ccCEEEEechhc--hHHHHHHhhccC
Q 023401 150 KADLIVLNTAVA--GKWLDAVLKEDV 173 (282)
Q Consensus 150 ~~DLVIaNT~v~--g~wl~~l~~~~~ 173 (282)
++|+||...++. .+.+.+..+..+
T Consensus 80 ~~d~vV~Spgi~~~~p~l~~a~~~gi 105 (524)
T 3hn7_A 80 APDLVVVGNAMKRGMDVIEYMLDTGL 105 (524)
T ss_dssp CCSEEEECTTCCTTSHHHHHHHHHTC
T ss_pred CCCEEEECCCcCCCCHHHHHHHHCCC
Confidence 699999999885 455665554444
No 42
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=84.00 E-value=0.92 Score=43.89 Aligned_cols=86 Identities=17% Similarity=0.213 Sum_probs=53.3
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (282)
..+..||+|.+. |.|.....+++.|++.|.+|+.+....+.. +.... ..+++..+..++.+.....+.
T Consensus 327 ~~~l~GKrv~i~-------~~~~~~~~l~~~L~ElGmevv~~gt~~~~~--~d~~~-~~~~l~~~~~i~~d~d~~el~~~ 396 (483)
T 3pdi_A 327 RARLEGKRVLLY-------TGGVKSWSVVSALQDLGMKVVATGTKKSTE--EDKAR-IRELMGDDVKMLDEGNARVLLKT 396 (483)
T ss_dssp HHHHTTCEEEEE-------CSSSCHHHHHHHHHHHTCEEEEECBSSSCH--HHHHH-HHHHSCSSCCBCCSCSHHHHHHH
T ss_pred HHHhcCCEEEEE-------CCCchHHHHHHHHHHCCCEEEEEecCCCCH--HHHHH-HHHhcCCCCEEEeCCCHHHHHHH
Confidence 356889999874 334567789999999999999876554421 11011 122223355566553333332
Q ss_pred -HhhccCEEEEechhchHHHH
Q 023401 147 -TALKADLIVLNTAVAGKWLD 166 (282)
Q Consensus 147 -~a~~~DLVIaNT~v~g~wl~ 166 (282)
...++||+|.|+- ++++.
T Consensus 397 i~~~~pDL~ig~~~--~~~~a 415 (483)
T 3pdi_A 397 VDEYQADILIAGGR--NMYTA 415 (483)
T ss_dssp HHHTTCSEEECCGG--GHHHH
T ss_pred HHhcCCCEEEECCc--hhHHH
Confidence 2567999999986 55554
No 43
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=82.21 E-value=2.6 Score=38.29 Aligned_cols=81 Identities=15% Similarity=0.308 Sum_probs=57.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhH-----
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQET----- 144 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~----- 144 (282)
+|++++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+........
T Consensus 152 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~ 224 (415)
T 3lxd_A 152 AKNAVVI-------GGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG 224 (415)
T ss_dssp CCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC
Confidence 8899988 45557789999999999999998754322 2456666677888888998885421111
Q ss_pred -----HH----HhhccCEEEEechhc
Q 023401 145 -----IN----TALKADLIVLNTAVA 161 (282)
Q Consensus 145 -----i~----~a~~~DLVIaNT~v~ 161 (282)
+. ....+|+||..|-..
T Consensus 225 ~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 225 TKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp SBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 11 134589999987654
No 44
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=81.68 E-value=2.8 Score=34.87 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=40.4
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchhhhhhhHHHHHHcCCceee
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~~~v~~~L~~kll~rgI~v~~ 138 (282)
.|.+||+||+| .|.=.||+ -+.+.++.|++.|..++-+. ..+++. + .+++.+.|+++..
T Consensus 110 ~~~~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~-g------~~~l~~~g~~~~s 170 (180)
T 2p1z_A 110 PDVVGKKVLVV-EDTTTTGN--SPLTAVKALREAGAEVVGVATVVDRATG-A------ADVIAAEGLEYRY 170 (180)
T ss_dssp SCCTTCEEEEE-EEECSSSH--HHHHHHHHHHHHTCEEEEEEEEEC-CCC-H------HHHHHTTTCCEEE
T ss_pred CCCCcCEEEEE-EeccCCcH--HHHHHHHHHHHcCCeEEEEEEEEEcCcc-h------HHHHHhcCCeEEE
Confidence 36899999888 77777898 56788999999998744222 333321 1 3456667888764
No 45
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=81.62 E-value=1.1 Score=46.32 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=30.9
Q ss_pred ccEEEEEeccC----------CCCCchHHHH---------HHHHHHHhCCCeEE----EEeccCC
Q 023401 74 SKLVLLVSHEL----------SLSGGPLLLM---------ELAFLLRGVGTKVN----WITIQKP 115 (282)
Q Consensus 74 ~KkILLISHEL----------s~TGAPLlLl---------eLA~~Lkq~G~~V~----vL~~~~G 115 (282)
.-+|++||=-. .-||++.+=. |||+.|.+.|++|. +++.+-+
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~ 342 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLP 342 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCT
T ss_pred eeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCC
Confidence 34677777544 4679988766 69999999999875 8875543
No 46
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=81.49 E-value=3.8 Score=39.63 Aligned_cols=79 Identities=13% Similarity=0.171 Sum_probs=51.3
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHH-HhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLL-RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~L-kq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (282)
....||+|.+. |.|.....+++.| ++.|.+|+......+.+.+. +.+.+.+.+-.+........+.
T Consensus 299 ~~l~Gkrv~i~-------gd~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~----~~~~l~~~~~~v~~~~D~~el~~~ 367 (511)
T 2xdq_B 299 QNLTGKKAVVF-------GDNTHAAAMTKILSREMGIHVVWAGTYCKYDADW----FRAEVAGFCDEVLITDDHTVVGDA 367 (511)
T ss_dssp HTTTTCEEEEE-------ECHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHH----HHHHHTTTSSEEEECCCHHHHHHH
T ss_pred HhccCCEEEEE-------cCChHHHHHHHHHHHhCCCEEEEeecCCCCchHH----HHHHHHhcCCcEEEeCCHHHHHHH
Confidence 57899999886 4677899999999 89999998766543322222 2334444443444322232332
Q ss_pred -HhhccCEEEEech
Q 023401 147 -TALKADLIVLNTA 159 (282)
Q Consensus 147 -~a~~~DLVIaNT~ 159 (282)
...++|++|.|+-
T Consensus 368 i~~~~pDl~ig~~~ 381 (511)
T 2xdq_B 368 IARVEPAAIFGTQM 381 (511)
T ss_dssp HHHHCCSEEEECHH
T ss_pred HHhcCCCEEEeccc
Confidence 3457999999986
No 47
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=81.23 E-value=3 Score=35.51 Aligned_cols=59 Identities=19% Similarity=0.273 Sum_probs=42.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeE---EEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKV---NWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V---~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.|.+||+||+| .|.-.||+ -+.+.++.|++.|..+ .++..+..+ -.+++.+.|+++..-
T Consensus 107 ~~~~gk~VliV-DDvitTG~--Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~--------~~~~l~~~g~~v~sl 168 (205)
T 2wns_A 107 TINPGETCLII-EDVVTSGS--SVLETVEVLQKEGLKVTDAIVLLDREQG--------GKDKLQAHGIRLHSV 168 (205)
T ss_dssp CCCTTCBEEEE-EEEESSSH--HHHHHHHHHHHTTCBCCEEEEEEECCSS--------HHHHHHTTTCEEEEE
T ss_pred CCCCCCEEEEE-EEeccccH--HHHHHHHHHHHCCCEEEEEEEEEEcCcc--------hHHHHHHcCCeEEEE
Confidence 35689999888 77778899 6778999999999873 344444211 145677778888754
No 48
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=80.92 E-value=3.9 Score=36.27 Aligned_cols=66 Identities=20% Similarity=0.191 Sum_probs=43.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEE---EeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNW---ITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~v---L~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+.+||+||+| .|.=.||+ -+.+.++.|++.|.+++- +..+.........+..++.+.+.|+++..-
T Consensus 133 ~~~Gk~VLIV-DDVitTG~--Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~~~~~gv~v~sL 201 (232)
T 3mjd_A 133 DMTNKKVLLI-DDVMTAGT--AFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKISQDFNIPVLAV 201 (232)
T ss_dssp CCTTCEEEEE-CSCCSSSH--HHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHHHHHHCCCEEEE
T ss_pred CCCCCEEEEE-EeeccccH--HHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHHHHHcCCcEEEE
Confidence 5689999888 56667777 578999999999998653 333221101011234456667789998854
No 49
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=80.87 E-value=5.8 Score=35.67 Aligned_cols=85 Identities=15% Similarity=0.191 Sum_probs=53.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHh-hccC
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTA-LKAD 152 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a-~~~D 152 (282)
.|+|.||. +..+| |--+|++|++.|++|.+.=.+..+ +..+++.+.|+++........ .. .++|
T Consensus 4 ~~~i~~iG--iGg~G----ms~~A~~L~~~G~~V~~~D~~~~~-------~~~~~L~~~gi~v~~g~~~~~--l~~~~~d 68 (326)
T 3eag_A 4 MKHIHIIG--IGGTF----MGGLAAIAKEAGFEVSGCDAKMYP-------PMSTQLEALGIDVYEGFDAAQ--LDEFKAD 68 (326)
T ss_dssp CCEEEEES--CCSHH----HHHHHHHHHHTTCEEEEEESSCCT-------THHHHHHHTTCEEEESCCGGG--GGSCCCS
T ss_pred CcEEEEEE--ECHHH----HHHHHHHHHhCCCEEEEEcCCCCc-------HHHHHHHhCCCEEECCCCHHH--cCCCCCC
Confidence 36777774 22222 334899999999999875433221 245678888999985422221 22 4799
Q ss_pred EEEEechhc--hHHHHHHhhccC
Q 023401 153 LIVLNTAVA--GKWLDAVLKEDV 173 (282)
Q Consensus 153 LVIaNT~v~--g~wl~~l~~~~~ 173 (282)
+||....+. .+.+.+..+...
T Consensus 69 ~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 69 VYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp EEEECTTCCTTCHHHHHHHHTTC
T ss_pred EEEECCCcCCCCHHHHHHHHcCC
Confidence 999999885 455565553344
No 50
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.29 E-value=2 Score=38.90 Aligned_cols=81 Identities=17% Similarity=0.220 Sum_probs=56.1
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC--CchhhhhhhHHHHHHcCCceeehhchhHHH----
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS--EEDEVIYSLEHKMWDRGVQVISAKGQETIN---- 146 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~--~~~~v~~~L~~kll~rgI~v~~~k~~~~i~---- 146 (282)
.+|++++| |+-..-+|+|..|++.|.+|.++...... .+.++...+++.+.++||++........+.
T Consensus 142 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v 214 (367)
T 1xhc_A 142 NSGEAIII-------GGGFIGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNSELLEANEEGV 214 (367)
T ss_dssp HHSEEEEE-------ECSHHHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECSCCEEEECSSEE
T ss_pred cCCcEEEE-------CCCHHHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEE
Confidence 46889888 44457899999999999999998743221 234565667888888899987653222111
Q ss_pred -----HhhccCEEEEechhc
Q 023401 147 -----TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -----~a~~~DLVIaNT~v~ 161 (282)
. ..+|+||..|-..
T Consensus 215 ~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 215 LTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp EETTEE-EECSCEEEECCEE
T ss_pred EECCCE-EEcCEEEECcCCC
Confidence 2 4689998866543
No 51
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=79.71 E-value=2.4 Score=33.29 Aligned_cols=76 Identities=14% Similarity=0.183 Sum_probs=46.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHH--
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT-- 147 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~~-- 147 (282)
|.+++|++++ .+..| .++++.|.+.|++|.++..... +-...+. +....|+.++.. .....+..
T Consensus 1 ~~~~~vlI~G--~G~vG-----~~la~~L~~~g~~V~vid~~~~----~~~~~~~-~~~~~~~~~i~gd~~~~~~l~~a~ 68 (153)
T 1id1_A 1 HRKDHFIVCG--HSILA-----INTILQLNQRGQNVTVISNLPE----DDIKQLE-QRLGDNADVIPGDSNDSSVLKKAG 68 (153)
T ss_dssp CCCSCEEEEC--CSHHH-----HHHHHHHHHTTCCEEEEECCCH----HHHHHHH-HHHCTTCEEEESCTTSHHHHHHHT
T ss_pred CCCCcEEEEC--CCHHH-----HHHHHHHHHCCCCEEEEECCCh----HHHHHHH-HhhcCCCeEEEcCCCCHHHHHHcC
Confidence 5677888886 34445 6788899999999999874311 1100111 223347777743 22333432
Q ss_pred hhccCEEEEech
Q 023401 148 ALKADLIVLNTA 159 (282)
Q Consensus 148 a~~~DLVIaNT~ 159 (282)
..++|.||+-|-
T Consensus 69 i~~ad~vi~~~~ 80 (153)
T 1id1_A 69 IDRCRAILALSD 80 (153)
T ss_dssp TTTCSEEEECSS
T ss_pred hhhCCEEEEecC
Confidence 568999998764
No 52
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=79.59 E-value=2 Score=38.53 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=30.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
|.-++|++++. ...|.-..++.|++.|++.|++|.+++..
T Consensus 5 m~m~kIl~~~~--~~~Gh~~p~~~la~~L~~~G~~V~~~~~~ 44 (430)
T 2iyf_A 5 TTPAHIAMFSI--AAHGHVNPSLEVIRELVARGHRVTYAIPP 44 (430)
T ss_dssp ---CEEEEECC--SCHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred cccceEEEEeC--CCCccccchHHHHHHHHHCCCeEEEEeCH
Confidence 44468999875 23466667899999999999999999843
No 53
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=79.23 E-value=2.4 Score=38.74 Aligned_cols=88 Identities=20% Similarity=0.185 Sum_probs=58.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHH---
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (282)
.+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+.......++
T Consensus 142 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 214 (410)
T 3ef6_A 142 SATRLLIV-------GGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE 214 (410)
T ss_dssp TTCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECS
T ss_pred cCCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEecc
Confidence 38899988 45557789999999999999988744332 23455556777788889988754221111
Q ss_pred ------H----HhhccCEEEEechhch--HHHHH
Q 023401 146 ------N----TALKADLIVLNTAVAG--KWLDA 167 (282)
Q Consensus 146 ------~----~a~~~DLVIaNT~v~g--~wl~~ 167 (282)
. ....+|+||..|-... .+++.
T Consensus 215 ~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~ 248 (410)
T 3ef6_A 215 GQLEQVMASDGRSFVADSALICVGAEPADQLARQ 248 (410)
T ss_dssp SSCCEEEETTSCEEECSEEEECSCEEECCHHHHH
T ss_pred CcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHh
Confidence 1 1245899999876543 34443
No 54
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=78.99 E-value=3.4 Score=34.45 Aligned_cols=58 Identities=24% Similarity=0.327 Sum_probs=40.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE---EEeccCCCCchhhhhhhHHHHHHcCCceee
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN---WITIQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~---vL~~~~G~~~~~v~~~L~~kll~rgI~v~~ 138 (282)
..+||+||+| .|.-.||+ -|.+.++.|++.|..++ ++..+ +.. +=.+++.+.|+++..
T Consensus 123 ~~~gk~VLlV-DDvitTG~--Tl~~a~~~L~~~Ga~~V~~~~l~~~-~~~------~~~~~l~~~g~~v~s 183 (190)
T 2dy0_A 123 IKPGDKVLVV-DDLLATGG--TIEATVKLIRRLGGEVADAAFIINL-FDL------GGEQRLEKQGITSYS 183 (190)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEEEEEEEEEE-GGG------CHHHHHHTTTCEEEE
T ss_pred cCCcCEEEEE-EccccchH--HHHHHHHHHHHcCCEEEEEEEEEEc-cCc------chHHHHhhCCCcEEE
Confidence 3589999888 77888999 56899999999998854 23323 210 014567667888763
No 55
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=78.50 E-value=3.3 Score=38.49 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=56.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHHH----
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETIN---- 146 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~---- 146 (282)
.+++++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+++.+.++||.+........++
T Consensus 147 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v 219 (437)
T 4eqs_A 147 VDKVLVV-------GAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEI 219 (437)
T ss_dssp CCEEEEE-------CCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTEE
T ss_pred CcEEEEE-------CCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCCee
Confidence 5678887 4445678999999999999999874332 1455677778899999999998663322221
Q ss_pred -----HhhccCEEEEechh
Q 023401 147 -----TALKADLIVLNTAV 160 (282)
Q Consensus 147 -----~a~~~DLVIaNT~v 160 (282)
....+|+|+..+-.
T Consensus 220 ~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 220 TFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp EETTSCEEECSEEEECCCE
T ss_pred eecCCeEEeeeeEEEEece
Confidence 23458999986543
No 56
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=78.33 E-value=3.6 Score=37.29 Aligned_cols=88 Identities=18% Similarity=0.260 Sum_probs=59.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhH----
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQET---- 144 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~---- 144 (282)
.+|++++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+.......+
T Consensus 141 ~~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 213 (404)
T 3fg2_P 141 DKKHVVVI-------GAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE 213 (404)
T ss_dssp GCSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE
T ss_pred cCCeEEEE-------CCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec
Confidence 57889888 45567789999999999999988744322 2445666677888888998875421111
Q ss_pred ------HH----HhhccCEEEEechhc--hHHHHH
Q 023401 145 ------IN----TALKADLIVLNTAVA--GKWLDA 167 (282)
Q Consensus 145 ------i~----~a~~~DLVIaNT~v~--g~wl~~ 167 (282)
+. ....+|+||..|-.. ..+++.
T Consensus 214 ~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~ 248 (404)
T 3fg2_P 214 GDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAA 248 (404)
T ss_dssp TTEEEEEEETTSCEEECSEEEECCCEEECCHHHHH
T ss_pred CCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHh
Confidence 11 134589999988653 234543
No 57
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=78.32 E-value=4.9 Score=34.07 Aligned_cols=60 Identities=15% Similarity=0.281 Sum_probs=41.6
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE--EEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN--WITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~--vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+.+||+||+| .|.-.||+ -+.+.++.|++.|..++ +.+..++.. .-.+++.+.|++++.-
T Consensus 114 ~~~gk~VliV-DDvitTG~--Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~------~~~~~l~~~~~~~~~l 175 (211)
T 2aee_A 114 VLKGQKMVII-EDLISTGG--SVLDAAAAASREGADVLGVVAIFTYELP------KASQNFKEAGIKLITL 175 (211)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEEEEEEEEECCCH------HHHHHHHHHTCCEEES
T ss_pred CCCcCEEEEE-eecccchH--HHHHHHHHHHHCCCcEEEEEEEEecccc------cHHHHHHhCCCCEEEE
Confidence 6899998887 67777898 67789999999999863 333333321 1245666677777644
No 58
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=78.28 E-value=3.3 Score=38.38 Aligned_cols=80 Identities=10% Similarity=0.203 Sum_probs=54.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHHH----
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETIN---- 146 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~---- 146 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++..... ....++...+.+.+.++||++........+.
T Consensus 180 ~~~v~Vi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~ 252 (476)
T 3lad_A 180 PGKLGVI-------GAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNK 252 (476)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCC
Confidence 5778887 4445678999999999999998874432 2355666777888888899887552211111
Q ss_pred ------------HhhccCEEEEechh
Q 023401 147 ------------TALKADLIVLNTAV 160 (282)
Q Consensus 147 ------------~a~~~DLVIaNT~v 160 (282)
....+|.||..|-.
T Consensus 253 ~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 253 QVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp CEEEEEESSSEEEEEEESEEEECSCE
T ss_pred EEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 12357888887764
No 59
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=78.28 E-value=3.6 Score=39.36 Aligned_cols=82 Identities=18% Similarity=0.384 Sum_probs=56.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHH----
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETI---- 145 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~~i---- 145 (282)
.+|++++| |+-..-+|+|..|.+.|.+|.++..... ....++...+.+.+.++|+.+........+
T Consensus 186 ~~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~ 258 (588)
T 3ics_A 186 KPRHATVI-------GGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENG 258 (588)
T ss_dssp CCSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG
T ss_pred CCCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC
Confidence 47888888 4445678999999999999998874322 134566667888888899998754221111
Q ss_pred ---H----HhhccCEEEEechhc
Q 023401 146 ---N----TALKADLIVLNTAVA 161 (282)
Q Consensus 146 ---~----~a~~~DLVIaNT~v~ 161 (282)
. ....+|.||..|-..
T Consensus 259 ~~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 259 AVVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp TEEEETTSCEEECSEEEECSCEE
T ss_pred CEEEECCCCEEEcCEEEEccCCC
Confidence 1 124589999987653
No 60
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=78.24 E-value=1.3 Score=41.01 Aligned_cols=42 Identities=19% Similarity=0.125 Sum_probs=36.4
Q ss_pred cccEEEEEeccCCCC---CchHHHHHHHHHHHhCCCeEEEEeccC
Q 023401 73 KSKLVLLVSHELSLS---GGPLLLMELAFLLRGVGTKVNWITIQK 114 (282)
Q Consensus 73 ~~KkILLISHELs~T---GAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (282)
.++||++++...+-. |+.-...++|+.|.+.|++|.+++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 568999999998853 777778999999999999999999653
No 61
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=77.57 E-value=3.8 Score=38.63 Aligned_cols=60 Identities=18% Similarity=0.280 Sum_probs=45.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++||++...
T Consensus 150 ~~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~ 212 (565)
T 3ntd_A 150 NVEHATVV-------GGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLG 212 (565)
T ss_dssp TCSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCCEEEEE-------CCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeC
Confidence 36789988 44557789999999999999998744321 34566666778888889988754
No 62
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=76.31 E-value=9.9 Score=33.05 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=25.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEec
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITI 112 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~-G~~V~vL~~ 112 (282)
+||++++.+.+-.| ....+++.|++. |+++++++.
T Consensus 6 mkIl~v~~~~~~~~---~~~~l~~~L~~~~g~~v~~~~~ 41 (376)
T 1v4v_A 6 KRVVLAFGTRPEAT---KMAPVYLALRGIPGLKPLVLLT 41 (376)
T ss_dssp EEEEEEECSHHHHH---HHHHHHHHHHTSTTEEEEEEEC
T ss_pred eEEEEEEeccHHHH---HHHHHHHHHHhCCCCceEEEEc
Confidence 57999997654333 356789999998 798877763
No 63
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=76.23 E-value=7.7 Score=36.35 Aligned_cols=82 Identities=18% Similarity=0.273 Sum_probs=57.3
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC----CCchhhhhhhHHHHHHcCCceeehhchhHH---
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP----SEEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G----~~~~~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (282)
.+|+|++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++||++.......++
T Consensus 193 ~~~~vvVI-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 265 (490)
T 2bc0_A 193 DIKRVAVV-------GAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN 265 (490)
T ss_dssp TCCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECS
T ss_pred CCceEEEE-------CCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC
Confidence 57888888 6667889999999999999999984432 134556667788888889988754211111
Q ss_pred ------H---HhhccCEEEEechhc
Q 023401 146 ------N---TALKADLIVLNTAVA 161 (282)
Q Consensus 146 ------~---~a~~~DLVIaNT~v~ 161 (282)
. ....+|+||..|-..
T Consensus 266 ~~v~~v~~~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 266 GKVEKIITDKNEYDVDMVILAVGFR 290 (490)
T ss_dssp SSCCEEEESSCEEECSEEEECCCEE
T ss_pred CcEEEEEECCcEEECCEEEECCCCC
Confidence 1 124589999887643
No 64
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=75.93 E-value=6.1 Score=32.68 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=40.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
++||+||+| .|.-.||+ -|.+.++.|++.|..++-++ ..+++ +-.+++.+.|+++..-
T Consensus 104 ~~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-------~~~~~l~~~g~~~~sl 163 (178)
T 2yzk_A 104 PPKGRVVVV-DDVATTGT--SIAKSIEVLRSNGYTVGTALVLVDRGE-------GAGELLARMGVRLVSV 163 (178)
T ss_dssp CCSSEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCS-------SHHHHHHTTTCEEEEE
T ss_pred CCCCEEEEE-EeccCCcH--HHHHHHHHHHHcCCeEEEEEEEEEcCc-------CHHHHHHHcCCcEEEE
Confidence 499999887 77778898 56799999999999854333 22221 1145676678887743
No 65
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=75.82 E-value=5.4 Score=34.41 Aligned_cols=66 Identities=12% Similarity=0.164 Sum_probs=42.4
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchh----hhhhhHHHHHHcCCceeeh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDE----VIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~~~----v~~~L~~kll~rgI~v~~~ 139 (282)
..+||+||+| .|.-.||+ -+.+.++.|++.|.+++-++ ..++..+.+ -.+...+.+...|+++..-
T Consensus 122 ~i~Gk~VlIV-DDvitTG~--Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~g~~~~~~~~~~~~~~~~~~g~~v~sl 193 (226)
T 2ps1_A 122 ALENKRILII-DDVMTAGT--AINEAFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSATQTVSKKYGIPVLSI 193 (226)
T ss_dssp CCTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCBBSCTTCSSCCBHHHHHHHHHTCCEEEE
T ss_pred CCCcCEEEEE-EecccChH--HHHHHHHHHHHcCCeEEEEEEEEEccCcccccccccchHHHHHHHhcCCeEEEE
Confidence 3589999887 77778898 66799999999999854322 222321111 1122344455578888855
No 66
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=75.71 E-value=10 Score=34.92 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=49.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCC--chhhhhhhHHHHHHcCCceeehhc---hhH
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSE--EDEVIYSLEHKMWDRGVQVISAKG---QET 144 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~--~~~v~~~L~~kll~rgI~v~~~k~---~~~ 144 (282)
|+..||+|. |.|=+...-.+.|.+.|++|+.+..+. +.. ......++.+..++.|||++.-.. .+.
T Consensus 5 ~~~mrivf~-------Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~ 77 (318)
T 3q0i_A 5 SQSLRIVFA-------GTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDES 77 (318)
T ss_dssp --CCEEEEE-------CCSHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHHH
T ss_pred ccCCEEEEE-------ecCHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHHH
Confidence 455678886 777777777788888899998887642 110 111223567888889999985422 222
Q ss_pred HH--HhhccCEEEEe
Q 023401 145 IN--TALKADLIVLN 157 (282)
Q Consensus 145 i~--~a~~~DLVIaN 157 (282)
++ ...++|+||+-
T Consensus 78 ~~~l~~~~~Dliv~~ 92 (318)
T 3q0i_A 78 KQQLAALNADLMVVV 92 (318)
T ss_dssp HHHHHTTCCSEEEES
T ss_pred HHHHHhcCCCEEEEe
Confidence 22 35679999974
No 67
>2lta_A De novo designed protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=76.78 E-value=0.61 Score=37.03 Aligned_cols=49 Identities=29% Similarity=0.365 Sum_probs=36.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR 132 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r 132 (282)
|-||.|++||-|-. -|-|||+..+..|.+|.+|+..+.+. -|++++.+.
T Consensus 1 mgskiiviissddt------tleelarkikdeglevyillkdkdek------rleekiqkl 49 (110)
T 2lta_A 1 MGSKIIVIISSDDT------TLEELARKIKDEGLEVYILLKDKDEK------RLEEKIQKL 49 (110)
Confidence 45788888887643 47799999999999999999665531 456665544
No 68
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=74.27 E-value=21 Score=34.08 Aligned_cols=91 Identities=22% Similarity=0.200 Sum_probs=58.2
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc-----
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG----- 141 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~----- 141 (282)
++++|-+++.|.+++ .+.+|---++..||..|+..|..|.++...-- ..-....|...-...|++++....
T Consensus 91 ~~i~l~~~~vi~i~G--~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~--r~aa~~qL~~~~~~~gv~v~~~~~~~~p~ 166 (425)
T 2ffh_A 91 RLPVLKDRNLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ--RPAAREQLRLLGEKVGVPVLEVMDGESPE 166 (425)
T ss_dssp CCCCCCSSEEEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEEEECCSS--CHHHHHHHHHHHHHHTCCEEECCTTCCHH
T ss_pred ccccCCCCeEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEeecccc--CchhHHHHHHhcccCCccEEecCCCCCHH
Confidence 355555566666665 48899999999999999999999988874211 111111122222234888886421
Q ss_pred ---hhHHHHh--hccCEEEEechhc
Q 023401 142 ---QETINTA--LKADLIVLNTAVA 161 (282)
Q Consensus 142 ---~~~i~~a--~~~DLVIaNT~v~ 161 (282)
.+.+..+ ..+|+||+-|+-.
T Consensus 167 ~i~~~~l~~~~~~~~DvVIIDTaG~ 191 (425)
T 2ffh_A 167 SIRRRVEEKARLEARDLILVDTAGR 191 (425)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 1233333 6799999999743
No 69
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=73.93 E-value=8.7 Score=32.86 Aligned_cols=64 Identities=19% Similarity=0.238 Sum_probs=41.4
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE---EEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN---WITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~---vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+.+| +||+| .|.=.||+ -+.+.++.|++.|.+++ ++..+ +..+.+-.+..++.+.+.|+++..-
T Consensus 115 ~~~g-~VliV-DDvitTG~--Tl~~a~~~l~~~Ga~~v~v~~l~dr-~~~g~~~l~~~~~~~~~~g~~v~sl 181 (213)
T 1lh0_A 115 ALQG-RVMLV-DDVITAGT--AIRESMEIIQAHGATLAGVLISLDR-QERGRGEISAIQEVERDYGCKVISI 181 (213)
T ss_dssp CCCS-EEEEE-CSCCSSSC--HHHHHHHHHHHTTCEEEEEEEEEEC-CBBCSSSSBHHHHHHHHHCCEEEEE
T ss_pred CCCC-CEEEE-EecccchH--HHHHHHHHHHHCCCeEEEEEEEEEc-ccCcccchhhHHHHHHHcCCCeEEE
Confidence 5689 88877 77778888 67789999999999854 33333 2211121122344455578888754
No 70
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=73.86 E-value=12 Score=35.85 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=54.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
+.|+|++|. +..+|- --+|++|++.|++|...=.+.. +..+++.+.||++..-...+ ...++|
T Consensus 21 ~~~~v~viG--iG~sG~----s~~A~~l~~~G~~V~~~D~~~~--------~~~~~l~~~gi~~~~g~~~~---~~~~~d 83 (494)
T 4hv4_A 21 RVRHIHFVG--IGGAGM----GGIAEVLANEGYQISGSDLAPN--------SVTQHLTALGAQIYFHHRPE---NVLDAS 83 (494)
T ss_dssp -CCEEEEET--TTSTTH----HHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCEEESSCCGG---GGTTCS
T ss_pred cCCEEEEEE--EcHhhH----HHHHHHHHhCCCeEEEEECCCC--------HHHHHHHHCCCEEECCCCHH---HcCCCC
Confidence 358899987 355552 1269999999999986532211 33567888899988642222 245799
Q ss_pred EEEEechhch--HHHHHHhhccC
Q 023401 153 LIVLNTAVAG--KWLDAVLKEDV 173 (282)
Q Consensus 153 LVIaNT~v~g--~wl~~l~~~~~ 173 (282)
+||....+.- +.+.+..+..+
T Consensus 84 ~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 84 VVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp EEEECTTSCTTCHHHHHHHHTTC
T ss_pred EEEECCCCCCCCHHHHHHHHCCC
Confidence 9999998853 55555543333
No 71
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=73.72 E-value=6.9 Score=34.40 Aligned_cols=86 Identities=17% Similarity=0.186 Sum_probs=44.9
Q ss_pred ccccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceee
Q 023401 61 RIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVIS 138 (282)
Q Consensus 61 ~~~~~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G~~~~~v~~~L~~kll-~rgI~v~~ 138 (282)
...+.+++...|++|+||+++ -||. +=-++++.|.+. |++|..+....... +++. ..++.++.
T Consensus 11 ~~~~~~~~~~~m~~~~vlVtG----atG~--iG~~l~~~L~~~~g~~V~~~~r~~~~~---------~~~~~~~~v~~~~ 75 (372)
T 3slg_A 11 TLEAQTQGPGSMKAKKVLILG----VNGF--IGHHLSKRILETTDWEVFGMDMQTDRL---------GDLVKHERMHFFE 75 (372)
T ss_dssp ------------CCCEEEEES----CSSH--HHHHHHHHHHHHSSCEEEEEESCCTTT---------GGGGGSTTEEEEE
T ss_pred chhhhhcCCcccCCCEEEEEC----CCCh--HHHHHHHHHHhCCCCEEEEEeCChhhh---------hhhccCCCeEEEe
Confidence 344456677889999988753 2332 556788888887 99999998543321 1111 23555553
Q ss_pred h--h-chhHHH-HhhccCEEEEechhc
Q 023401 139 A--K-GQETIN-TALKADLIVLNTAVA 161 (282)
Q Consensus 139 ~--k-~~~~i~-~a~~~DLVIaNT~v~ 161 (282)
. . ....+. ...++|.||-+....
T Consensus 76 ~Dl~~d~~~~~~~~~~~d~Vih~A~~~ 102 (372)
T 3slg_A 76 GDITINKEWVEYHVKKCDVILPLVAIA 102 (372)
T ss_dssp CCTTTCHHHHHHHHHHCSEEEECBCCC
T ss_pred CccCCCHHHHHHHhccCCEEEEcCccc
Confidence 2 2 234444 456899999766543
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=73.57 E-value=26 Score=27.80 Aligned_cols=78 Identities=17% Similarity=0.134 Sum_probs=52.0
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH--cCCceeehhch---hHHH-Hhh
Q 023401 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQVISAKGQ---ETIN-TAL 149 (282)
Q Consensus 76 kILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~--rgI~v~~~k~~---~~i~-~a~ 149 (282)
+++.|+.--+..|--.+..+||..|.+.|..|.++=.... + ++..-+.. .+.+++..... +.+. ...
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~---~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 74 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ---M----SLTNWSKAGKAAFDVFTAASEKDVYGIRKDLA 74 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT---C----HHHHHHTTSCCSSEEEECCSHHHHHTHHHHTT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC---C----CHHHHHhcCCCCCcEEecCcHHHHHHHHHhcC
Confidence 5777877888999999999999999999999988874321 1 22222222 24566654321 1222 345
Q ss_pred ccCEEEEechh
Q 023401 150 KADLIVLNTAV 160 (282)
Q Consensus 150 ~~DLVIaNT~v 160 (282)
++|+||.-|.-
T Consensus 75 ~yD~viiD~~~ 85 (206)
T 4dzz_A 75 DYDFAIVDGAG 85 (206)
T ss_dssp TSSEEEEECCS
T ss_pred CCCEEEEECCC
Confidence 69999998864
No 73
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=73.57 E-value=4.6 Score=35.39 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=45.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc----------
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG---------- 141 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~---------- 141 (282)
+++|+|++.- +.+.|-+-..+|++.|++.| +|.++..+... .++.+.. ++.+.++..+..
T Consensus 17 l~~k~Illgv---TGsiaa~k~~~ll~~L~~~g-~V~vv~T~~A~---~fv~~~~---~~~~~~v~~d~~~~~~~~~~~~ 86 (209)
T 1mvl_A 17 PRKPRVLLAA---SGSVAAIKFGNLCHCFTEWA-EVRAVVTKSSL---HFLDKLS---LPQEVTLYTDEDEWSSWNKIGD 86 (209)
T ss_dssp --CCEEEEEE---CSSGGGGGHHHHHHHHHTTS-EEEEEECTGGG---GTCCGGG---SCTTCEEECTTHHHHHCSSTTS
T ss_pred cCCCEEEEEE---eCcHHHHHHHHHHHHHhcCC-CEEEEEcchHH---HhcCHHH---hhcCCeEEeCccccccccccCC
Confidence 5678887753 22222345789999999999 99999966552 2222222 225667776631
Q ss_pred -hhHHHHhhccCEEEE
Q 023401 142 -QETINTALKADLIVL 156 (282)
Q Consensus 142 -~~~i~~a~~~DLVIa 156 (282)
...++.+..+|++|+
T Consensus 87 ~i~hi~l~~~aD~mvI 102 (209)
T 1mvl_A 87 PVLHIELRRWADVLVI 102 (209)
T ss_dssp CCHHHHHHHHCSEEEE
T ss_pred CccchhhcccCCEEEE
Confidence 123455678999885
No 74
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=73.02 E-value=9.7 Score=32.31 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=43.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-CchhhhhhhHHHHHHcCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
..+|+|++| |+-..-+|+|..|.+.|.+|.++...... ....+...+.+.+.++||++...
T Consensus 143 ~~~~~v~Vi-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~ 204 (320)
T 1trb_A 143 YRNQKVAVI-------GGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTN 204 (320)
T ss_dssp GTTSEEEEE-------CSSHHHHHHHHHHTTTSSEEEEECSSSSCCCCHHHHHHHHHHHHTSSEEEECS
T ss_pred cCCCeEEEE-------CCCHHHHHHHHHHHhcCCeEEEEEeCCccccCHHHHHHHHHhcccCCeEEEcC
Confidence 357889888 44456789999999999999999844332 23344445666667789888755
No 75
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=72.83 E-value=6.3 Score=39.06 Aligned_cols=170 Identities=12% Similarity=0.137 Sum_probs=97.6
Q ss_pred ccccEEEEEecc-CCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhc
Q 023401 72 MKSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (282)
Q Consensus 72 ~~~KkILLISHE-Ls~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~ 150 (282)
++.+.|+|.|.. -+.+|.|-.+++.+.... .+.+++|++.+.-. .....|+.++.....+.+..+..
T Consensus 350 ~~~~~ivf~s~~g~~~~~n~~~i~~~l~~~~-~~~~~~w~~~~~~~-----------~~~~~~~~~v~~~s~~~~~~l~~ 417 (729)
T 3l7i_A 350 VKPKTIVFESFGGKNYSDSPKYIYEYMQKYY-PNYRYIWSFKNPDK-----------NVVPGSAEKVKRNSAEYYQAYSE 417 (729)
T ss_dssp CEEEEEEEEBGGGTBSCHHHHHHHHHHHHHC-TTSEEEEEESSGGG-----------CCCCSSCEEEETTSHHHHHHHHH
T ss_pred CcCCEEEEEECCCCCCCCCHHHHHHHHHHhC-CCceEEEEEcCccc-----------ccCCCCcEEEEECCHHHHHHHhc
Confidence 578899999976 557899999987665432 26899999954210 01234677776656666667788
Q ss_pred cCEEEEechhchHHHHHHhhccCCCC-CCceEEEeeeccccccccccccc------cccc----------------cccc
Q 023401 151 ADLIVLNTAVAGKWLDAVLKEDVPRV-LPNVLWWIHEMRGHYFKLDYVKH------LPLV----------------AGAM 207 (282)
Q Consensus 151 ~DLVIaNT~v~g~wl~~l~~~~~~~~-~~pVIWWIHE~r~~Yf~l~~vkh------L~~v----------------~~~~ 207 (282)
++.+|.|+-.-. |+ ++- ...+|.-=|=.. ++.+.+ +|.. --++
T Consensus 418 a~~~v~n~~~~~-~~--------~k~~~~~~iq~wHG~~-----lK~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 483 (729)
T 3l7i_A 418 ASHWVSNARTPL-YL--------NKKENQTYIQTWHGTP-----LKRLANDMKVVRMPGTTTPKYKRNFNRETSRWDYLI 483 (729)
T ss_dssp EEEEEESSCCCT-TS--------CCCTTCEEEECCSSCC-----SBCCGGGCSCCCCTTCCHHHHHHHHHHHHTTCSEEE
T ss_pred CcEEEECCCCcc-cc--------ccCCCcEEEECCCCCc-----hhhccccccccccccccCHHHHHHHHHhhccCCEEE
Confidence 999999886532 11 111 113343334321 111100 1100 0134
Q ss_pred ccchhhHHHHHHhhh-hhcCCCCCCeeEEEecCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Q 023401 208 IDSHVTAEYWKNRTR-ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 276 (282)
Q Consensus 208 ~dS~Ata~~w~~~~~-~~l~Ikl~~~~vv~L~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~~ 276 (282)
..|+.+.+.|++.++ ++.+|- +.-.-.+|.+.. .-.+...++.+++.+|++++.-+|--+
T Consensus 484 ~~s~~~~~~~~~~f~~~~~~i~-----~~G~PR~D~l~~----~~~~~~~~~~~~~~~~~~~~kk~ILya 544 (729)
T 3l7i_A 484 SPNRYSTEIFRSAFWMDEERIL-----EIGYPRNDVLVN----RANDQEYLDEIRTHLNLPSDKKVIMYA 544 (729)
T ss_dssp ESSHHHHHHHHHHTCCCGGGEE-----ESCCGGGHHHHH----STTCHHHHHHHHHHTTCCSSCEEEEEC
T ss_pred eCCHHHHHHHHHHhCCCcceEE-----EcCCCchHHHhc----ccchHHHHHHHHHHhCCCCCCeEEEEe
Confidence 558888787776654 211221 124556777764 111113567899999999987776544
No 76
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=72.67 E-value=21 Score=32.22 Aligned_cols=50 Identities=22% Similarity=0.235 Sum_probs=33.9
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 023401 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 76 kILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~ 137 (282)
||+|+++.. .|-=.=++.||+.|++.|++|.+++.. ...+.+.+.|++.+
T Consensus 2 rIli~~~gt--~Ghv~p~~~La~~L~~~Gh~V~v~~~~----------~~~~~v~~~g~~~~ 51 (404)
T 3h4t_A 2 GVLITGCGS--RGDTEPLVALAARLRELGADARMCLPP----------DYVERCAEVGVPMV 51 (404)
T ss_dssp CEEEEEESS--HHHHHHHHHHHHHHHHTTCCEEEEECG----------GGHHHHHHTTCCEE
T ss_pred eEEEEeCCC--CccHHHHHHHHHHHHHCCCeEEEEeCH----------HHHHHHHHcCCcee
Confidence 688888642 243334788999999999999999832 12444555666554
No 77
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=72.45 E-value=12 Score=34.15 Aligned_cols=89 Identities=21% Similarity=0.243 Sum_probs=61.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHH---
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (282)
.+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++||.+.......++
T Consensus 144 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 216 (408)
T 2gqw_A 144 PQSRLLIV-------GGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDG 216 (408)
T ss_dssp TTCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEETT
T ss_pred cCCeEEEE-------CCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEECC
Confidence 37888888 55567899999999999999998854322 23456667788888889988765222111
Q ss_pred --H----HhhccCEEEEechhc--hHHHHHH
Q 023401 146 --N----TALKADLIVLNTAVA--GKWLDAV 168 (282)
Q Consensus 146 --~----~a~~~DLVIaNT~v~--g~wl~~l 168 (282)
. ....+|+||..|-.. ..+++++
T Consensus 217 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~ 247 (408)
T 2gqw_A 217 VVLLDDGTRIAADMVVVGIGVLANDALARAA 247 (408)
T ss_dssp EEEETTSCEEECSEEEECSCEEECCHHHHHH
T ss_pred EEEECCCCEEEcCEEEECcCCCccHHHHHhC
Confidence 1 124589999877654 2466554
No 78
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=72.38 E-value=12 Score=34.28 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=56.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC----CCchhhhhhhHHHHHHcCCceeehhchhHH---
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP----SEEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G----~~~~~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (282)
.+|++++| |+-..-+|+|..|++.|.+|.++..... ....++...+.+.+.++||.+.....-.++
T Consensus 148 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 220 (452)
T 2cdu_A 148 KAKTITII-------GSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEV 220 (452)
T ss_dssp GCSEEEEE-------CCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEE
T ss_pred cCCeEEEE-------CcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC
Confidence 47888887 5666789999999999999999884432 134566667788888899988754211111
Q ss_pred -------H---HhhccCEEEEechhc
Q 023401 146 -------N---TALKADLIVLNTAVA 161 (282)
Q Consensus 146 -------~---~a~~~DLVIaNT~v~ 161 (282)
. ....+|.||..|-..
T Consensus 221 ~~~v~~v~~~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 221 DDEIITKTLDGKEIKSDIAILCIGFR 246 (452)
T ss_dssp TTEEEEEETTSCEEEESEEEECCCEE
T ss_pred CCeEEEEEeCCCEEECCEEEECcCCC
Confidence 1 123589999877653
No 79
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=72.07 E-value=6.3 Score=34.38 Aligned_cols=45 Identities=22% Similarity=0.098 Sum_probs=25.3
Q ss_pred ccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 63 ATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 63 ~~~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+++.+|..++++|+||+.+ -||. +=-++++.|.+.|++|..+...
T Consensus 10 ~~~~~~~~~~~~~~vlVTG----atG~--iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 10 HSSGLVPRGSHMKKVFITG----ICGQ--IGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp -----------CCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCceeeecCCCCEEEEeC----CccH--HHHHHHHHHHHCCCEEEEEECC
Confidence 3456888999999887753 2333 5567888899999999988754
No 80
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=71.84 E-value=15 Score=31.44 Aligned_cols=50 Identities=16% Similarity=0.123 Sum_probs=26.9
Q ss_pred cCccccccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 57 QSVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 57 ~~~~~~~~~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
.+.+....+++|..-++||++|+.. -+|+ +=.++|+.|.+.|++|.++..
T Consensus 4 ~~~~~~~~~~~~~~~l~~k~~lVTG----as~g--IG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 4 DKIHHHHHHMKEVFDLRGRVALVTG----GSRG--LGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp -------------CCCTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCCCCCCCCcCCCCCEEEEEC----CCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 3344445556777778888776653 2232 556889999999999887763
No 81
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=71.66 E-value=9.2 Score=31.72 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=39.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEE-e-ccCCCCchhhhhhhHHHHHHcCCcee
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI-T-IQKPSEEDEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL-~-~~~G~~~~~v~~~L~~kll~rgI~v~ 137 (282)
..+||+||+| .|.-.||+ -|.+.++.|++.|...+-+ + ..++.. +-.+++.+.|+++.
T Consensus 117 ~~~gk~VllV-DDvitTG~--Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~------~~~~~l~~~~~~~~ 176 (197)
T 1y0b_A 117 LSDQDHVLII-DDFLANGQ--AAHGLVSIVKQAGASIAGIGIVIEKSFQ------PGRDELVKLGYRVE 176 (197)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEEEEEEEEEETTS------THHHHHHHTTCCEE
T ss_pred cCCcCEEEEE-EcccccCH--HHHHHHHHHHHCCCEEEEEEEEEEeccc------chhhhHHhcCCcEE
Confidence 3589999887 78888999 6679999999999885422 2 333311 11355655666654
No 82
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=71.22 E-value=17 Score=30.36 Aligned_cols=87 Identities=10% Similarity=0.043 Sum_probs=44.6
Q ss_pred CCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hh
Q 023401 65 KSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AK 140 (282)
Q Consensus 65 ~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~----~k 140 (282)
++.|....++|+||+.. |+-=+=.++|+.|.+.|+.|.++..+..+... .+.+++...+..+.. -.
T Consensus 4 ~~~~~~~~~~k~vlITG------as~giG~~ia~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dv~ 73 (256)
T 3ezl_A 4 HHHHHMVMSQRIAYVTG------GMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV----KWLEDQKALGFDFYASEGNVG 73 (256)
T ss_dssp ---------CEEEEETT------TTSHHHHHHHHHHHHTTEEEEEEECTTCSSHH----HHHHHHHHTTCCCEEEECCTT
T ss_pred CCCCCCCCCCCEEEEEC------CCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH----HHHHHHHhcCCeeEEEecCCC
Confidence 35677778888777632 22235578999999999999887744443211 223444444444321 12
Q ss_pred chhHHH--------HhhccCEEEEechhc
Q 023401 141 GQETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 141 ~~~~i~--------~a~~~DLVIaNT~v~ 161 (282)
..++++ ....+|.+|.|..+.
T Consensus 74 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~ 102 (256)
T 3ezl_A 74 DWDSTKQAFDKVKAEVGEIDVLVNNAGIT 102 (256)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 222222 223689999887653
No 83
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=71.22 E-value=7.8 Score=34.30 Aligned_cols=60 Identities=23% Similarity=0.176 Sum_probs=43.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe---ccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT---IQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~---~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.+.+||+||+| .|.=.||+ -+.+.++.|++.|.+++-++ .+.. .+-.+++.+.|+++..-
T Consensus 133 ~~~~Gk~VLIV-DDvitTG~--Tl~~a~~~L~~~Ga~vv~v~~l~~~~~-------~~~~e~l~~~gi~v~sL 195 (234)
T 3m3h_A 133 KAEKGQKVVVV-EDLISTGG--SAITCVEALREAGCEVLGIVSIFTYEL-------EAGKEKLEAANVASYSL 195 (234)
T ss_dssp CCCTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCC-------HHHHHHHHHTTCCEEES
T ss_pred ccCCCCEEEEE-ecccchhH--HHHHHHHHHHHCCCEEEEEEEEEECcC-------chHHHHHHhcCCCEEEE
Confidence 35789999888 56667787 56799999999999865333 3321 12357788889998855
No 84
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=70.84 E-value=4.7 Score=35.92 Aligned_cols=60 Identities=13% Similarity=0.128 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc-hhHHH----HhhccCEEEEechhc
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-QETIN----TALKADLIVLNTAVA 161 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~-~~~i~----~a~~~DLVIaNT~v~ 161 (282)
.=..+|+.+.+.|++|.++.+..... . . ...|+.+++-.. ++.+. .+..+|.+|.|.+|+
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~~~~-~----~-----~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAvs 95 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKRALK-P----E-----PHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAVS 95 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTSCC-C----C-----CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCcccc-c----c-----CCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCccc
Confidence 44578999999999999998543210 0 0 012455554422 22222 456799999999875
No 85
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=70.20 E-value=22 Score=34.33 Aligned_cols=84 Identities=20% Similarity=0.218 Sum_probs=56.3
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------hhH
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------QET 144 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~--------~~~ 144 (282)
+++.|++++. +.+|=--+...||.+|++.|..|.++.+.-. ....+.-|..--...|++++.... ...
T Consensus 99 ~p~vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~--R~aa~eqL~~~~~~~gvpv~~~~~~~dp~~i~~~a 174 (443)
T 3dm5_A 99 KPTILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTW--RPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEG 174 (443)
T ss_dssp SSEEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCS--STHHHHHHHHHHGGGTCEEECCTTCCCHHHHHHHH
T ss_pred CCeEEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc--chhHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHH
Confidence 3567777776 8899999999999999999999999884322 111222233333345888885311 123
Q ss_pred HHHhhc--cCEEEEechh
Q 023401 145 INTALK--ADLIVLNTAV 160 (282)
Q Consensus 145 i~~a~~--~DLVIaNT~v 160 (282)
+..+.. +|+||+-|+-
T Consensus 175 l~~a~~~~~DvVIIDTaG 192 (443)
T 3dm5_A 175 VDYFKSKGVDIIIVDTAG 192 (443)
T ss_dssp HHHHHHTTCSEEEEECCC
T ss_pred HHHHHhCCCCEEEEECCC
Confidence 334443 9999999984
No 86
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=69.89 E-value=5.4 Score=35.97 Aligned_cols=38 Identities=24% Similarity=0.301 Sum_probs=30.2
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
-++||+||+| .|.=.||+ -|.+.++.|++.|...+.+.
T Consensus 202 ~v~Gk~VlIV-DDii~TG~--Tl~~aa~~Lk~~Ga~~V~~~ 239 (284)
T 1u9y_A 202 DAKDRDVFIV-DDIISTGG--TMATAVKLLKEQGAKKIIAA 239 (284)
T ss_dssp CCTTCCEEEE-EEECSSSH--HHHHHHHHHHHTTCCSEEEE
T ss_pred cCCCCEEEEE-ecccCchH--HHHHHHHHHHHCCCcEEEEE
Confidence 4789998887 67777898 67799999999998744443
No 87
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=69.85 E-value=31 Score=28.61 Aligned_cols=89 Identities=15% Similarity=-0.003 Sum_probs=49.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
++++|-+|..+.+..=-.-++-.+-..+++.|+++.+......+ +- +.+. .+.+ ...++|
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~---~~----~~~~------------~~~l-~~~~vd 66 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNSR---IS----EREQ------------ILEF-VHLKVD 66 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCH---HH----HHHH------------HHHH-HHTTCS
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCH---HH----HHHH------------HHHH-HHcCCC
Confidence 45678888777654333334555667788888888877643221 11 0011 1111 246788
Q ss_pred EEEEechhch---HHHHHHhhccCCCCCCceEEEeee
Q 023401 153 LIVLNTAVAG---KWLDAVLKEDVPRVLPNVLWWIHE 186 (282)
Q Consensus 153 LVIaNT~v~g---~wl~~l~~~~~~~~~~pVIWWIHE 186 (282)
.||+...... ..++.+.+.++ |+|..=.+
T Consensus 67 giI~~~~~~~~~~~~~~~~~~~~i-----PvV~~~~~ 98 (293)
T 3l6u_A 67 AIFITTLDDVYIGSAIEEAKKAGI-----PVFAIDRM 98 (293)
T ss_dssp EEEEECSCTTTTHHHHHHHHHTTC-----CEEEESSC
T ss_pred EEEEecCChHHHHHHHHHHHHcCC-----CEEEecCC
Confidence 8888655333 66777765566 66666443
No 88
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=69.69 E-value=4 Score=32.80 Aligned_cols=72 Identities=21% Similarity=0.184 Sum_probs=45.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-hchhHHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-KGQETINT- 147 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~-~-k~~~~i~~- 147 (282)
+.+++|++++ ++..|. .+|+.|++. |++|.++-.. + + -.+++.+.|+.++. + .....+..
T Consensus 37 ~~~~~v~IiG--~G~~G~-----~~a~~L~~~~g~~V~vid~~-~----~----~~~~~~~~g~~~~~gd~~~~~~l~~~ 100 (183)
T 3c85_A 37 PGHAQVLILG--MGRIGT-----GAYDELRARYGKISLGIEIR-E----E----AAQQHRSEGRNVISGDATDPDFWERI 100 (183)
T ss_dssp CTTCSEEEEC--CSHHHH-----HHHHHHHHHHCSCEEEEESC-H----H----HHHHHHHTTCCEEECCTTCHHHHHTB
T ss_pred CCCCcEEEEC--CCHHHH-----HHHHHHHhccCCeEEEEECC-H----H----HHHHHHHCCCCEEEcCCCCHHHHHhc
Confidence 4577899996 455554 567888888 9998887632 2 1 13456667888663 2 22333432
Q ss_pred --hhccCEEEEech
Q 023401 148 --ALKADLIVLNTA 159 (282)
Q Consensus 148 --a~~~DLVIaNT~ 159 (282)
..++|.||+.|-
T Consensus 101 ~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 101 LDTGHVKLVLLAMP 114 (183)
T ss_dssp CSCCCCCEEEECCS
T ss_pred cCCCCCCEEEEeCC
Confidence 357999998654
No 89
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=69.55 E-value=26 Score=30.53 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=48.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-Hh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TA 148 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a 148 (282)
|..|+||+++ -||. +=-++++.|.+.|++|.++........... ...+.+...|+.++.. ....++. .+
T Consensus 8 M~~~~IlVtG----atG~--iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~~~l~~~~v~~~~~Dl~d~~~l~~~~ 79 (346)
T 3i6i_A 8 SPKGRVLIAG----ATGF--IGQFVATASLDAHRPTYILARPGPRSPSKA--KIFKALEDKGAIIVYGLINEQEAMEKIL 79 (346)
T ss_dssp ---CCEEEEC----TTSH--HHHHHHHHHHHTTCCEEEEECSSCCCHHHH--HHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred CCCCeEEEEC----CCcH--HHHHHHHHHHHCCCCEEEEECCCCCChhHH--HHHHHHHhCCcEEEEeecCCHHHHHHHH
Confidence 6677788764 2332 445678888889999999885542211111 2234555678887743 2334444 44
Q ss_pred h--ccCEEEEechh
Q 023401 149 L--KADLIVLNTAV 160 (282)
Q Consensus 149 ~--~~DLVIaNT~v 160 (282)
. ++|.||.+...
T Consensus 80 ~~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 80 KEHEIDIVVSTVGG 93 (346)
T ss_dssp HHTTCCEEEECCCG
T ss_pred hhCCCCEEEECCch
Confidence 5 79999987764
No 90
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=69.11 E-value=13 Score=34.09 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=56.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhH----
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQET---- 144 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~---- 144 (282)
.+|++++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+........
T Consensus 148 ~~~~vvIi-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~ 220 (447)
T 1nhp_A 148 EVNNVVVI-------GSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGD 220 (447)
T ss_dssp TCCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECS
T ss_pred CCCeEEEE-------CCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc
Confidence 57888887 56667899999999999999998844321 2455666777888888988875421111
Q ss_pred -----HH---HhhccCEEEEechhc
Q 023401 145 -----IN---TALKADLIVLNTAVA 161 (282)
Q Consensus 145 -----i~---~a~~~DLVIaNT~v~ 161 (282)
+. ....+|.||..|-..
T Consensus 221 ~~v~~v~~~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 221 GRVQKVVTDKNAYDADLVVVAVGVR 245 (447)
T ss_dssp SBCCEEEESSCEEECSEEEECSCEE
T ss_pred CcEEEEEECCCEEECCEEEECcCCC
Confidence 11 123589999887653
No 91
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.96 E-value=4.9 Score=38.54 Aligned_cols=79 Identities=18% Similarity=0.130 Sum_probs=49.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee-ehh-chhHHHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI-SAK-GQETINT 147 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~-~~k-~~~~i~~ 147 (282)
.+..||+|.+. |.|-....+++.|++.|.+++.+....+++ +. + +.. . -.++ .|- ..+++-.
T Consensus 309 ~~l~Gkrv~i~-------~~~~~~~~l~~~L~elGm~vv~~~~~~~~~--~~----~-~~~-~-~~v~~~D~~~le~~i~ 372 (458)
T 3pdi_B 309 FMLSSARTAIA-------ADPDLLLGFDALLRSMGAHTVAAVVPARAA--AL----V-DSP-L-PSVRVGDLEDLEHAAR 372 (458)
T ss_dssp HHHTTCEEEEE-------CCHHHHHHHHHHHHTTTCEEEEEEESSCCS--CC----T-TTT-S-SCEEESHHHHHHHHHH
T ss_pred HhcCCCEEEEE-------CCcHHHHHHHHHHHHCCCEEEEEEECCCCh--hh----h-hCc-c-CcEEeCCHHHHHHHHH
Confidence 57889999984 567788999999999999999887544321 10 0 000 0 1222 221 1122113
Q ss_pred hhccCEEEEechhchHHHH
Q 023401 148 ALKADLIVLNTAVAGKWLD 166 (282)
Q Consensus 148 a~~~DLVIaNT~v~g~wl~ 166 (282)
..++||+|.|+- ++++.
T Consensus 373 ~~~pDllig~~~--~~~~a 389 (458)
T 3pdi_B 373 AGQAQLVIGNSH--ALASA 389 (458)
T ss_dssp HHTCSEEEECTT--HHHHH
T ss_pred hcCCCEEEEChh--HHHHH
Confidence 567999999987 44443
No 92
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=68.56 E-value=13 Score=31.79 Aligned_cols=61 Identities=18% Similarity=0.256 Sum_probs=43.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-CchhhhhhhHHHHHHcCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.++|+|++| |+-..-+|+|..|.+.|.+|.++.....- ..++...-|++.+.++||.+...
T Consensus 150 ~~~~~v~vi-------G~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~~~~~~~l~~~l~~~gv~v~~~ 211 (335)
T 2zbw_A 150 FQGKRVLIV-------GGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKELMKAHEEGRLEVLTP 211 (335)
T ss_dssp GTTCEEEEE-------CSSHHHHHHHHHTTTTSSEEEEECSSSSCCSCHHHHHHHHHHHHTTSSEEETT
T ss_pred cCCCEEEEE-------CCCHHHHHHHHHHHhhCCEEEEEEcCCccCccHHHHHHHHhccccCCeEEecC
Confidence 367888887 44457889999999999999998844321 23344445666666669888755
No 93
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=68.31 E-value=14 Score=31.45 Aligned_cols=75 Identities=17% Similarity=0.099 Sum_probs=45.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeehhc---hhHHHHhh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAKG---QETINTAL 149 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-gI~v~~~k~---~~~i~~a~ 149 (282)
+|+|++. .+.+.|-+-..++++.|++.|++|.++..+.+. .++.+. .+... | +|+.+.. ..-+..+.
T Consensus 5 ~k~Illg---vTGs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~---~fi~~~--~l~~l~~-~v~~~~~~~~~~hi~l~~ 75 (175)
T 3qjg_A 5 GENVLIC---LCGSVNSINISHYIIELKSKFDEVNVIASTNGR---KFINGE--ILKQFCD-NYYDEFEDPFLNHVDIAN 75 (175)
T ss_dssp CCEEEEE---ECSSGGGGGHHHHHHHHTTTCSEEEEEECTGGG---GGSCHH--HHHHHCS-CEECTTTCTTCCHHHHHH
T ss_pred CCEEEEE---EeCHHHHHHHHHHHHHHHHCCCEEEEEECcCHH---HHhhHH--HHHHhcC-CEEecCCCCccccccccc
Confidence 3666654 223333345789999999999999999977553 222222 12222 5 7776642 11344567
Q ss_pred ccCEEEEe
Q 023401 150 KADLIVLN 157 (282)
Q Consensus 150 ~~DLVIaN 157 (282)
.+|++++=
T Consensus 76 ~aD~~vVa 83 (175)
T 3qjg_A 76 KHDKIIIL 83 (175)
T ss_dssp TCSEEEEE
T ss_pred hhCEEEEe
Confidence 89998863
No 94
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=68.30 E-value=37 Score=30.94 Aligned_cols=119 Identities=13% Similarity=0.141 Sum_probs=70.9
Q ss_pred EEEEeccCC-CCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccCEEE
Q 023401 77 VLLVSHELS-LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIV 155 (282)
Q Consensus 77 ILLISHELs-~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~DLVI 155 (282)
.+.-..+.+ .++|+..--..+..+++.|++-.-+..... ..+....+...+. | .+....+.|.||
T Consensus 14 ~i~~~~~~~~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~--~~~~~~~~~~~~~--~----------~~~~~~~~DvIi 79 (339)
T 3rhz_A 14 YITNINGQSIQSTAQLCQNTVTDVAVSLGYRELGIYCYQI--HTDSESELSKRLD--G----------IVAGLRHGDVVI 79 (339)
T ss_dssp EEEEEESSCTTCHHHHHHHHHHHHHHHTTCEEEEEECCCG--GGSCHHHHHHHHH--H----------HTTTCCTTCEEE
T ss_pred eeecccCccccchHHHHHHHHHHHHHHCCCeEEEeecccc--ccccHHHHHHHHH--H----------HHhcCCCCCEEE
Confidence 444445533 458888888999999999999766652211 1111111222221 1 122478899999
Q ss_pred Eechh------chHHHHHHhhccCCCCCCceEEEeeecccc------ccc------ccccccccccccccccchhhHHHH
Q 023401 156 LNTAV------AGKWLDAVLKEDVPRVLPNVLWWIHEMRGH------YFK------LDYVKHLPLVAGAMIDSHVTAEYW 217 (282)
Q Consensus 156 aNT~v------~g~wl~~l~~~~~~~~~~pVIWWIHE~r~~------Yf~------l~~vkhL~~v~~~~~dS~Ata~~w 217 (282)
+-+=. .+.++..+.+.+. |++-+|||.... |.. .++..+++.. |+.+.++.
T Consensus 80 ~q~P~~~~~~~~~~~~~~lk~~~~-----k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~------S~~~~~~l 148 (339)
T 3rhz_A 80 FQTPTWNTTEFDEKLMNKLKLYDI-----KIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAP------SQKMIDKL 148 (339)
T ss_dssp EEECCSSCHHHHHHHHHHHTTSSC-----EEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEES------CHHHHHHH
T ss_pred EeCCCcchhhHHHHHHHHHHhcCC-----EEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEEC------CHHHHHHH
Confidence 85432 2455665543333 999999998721 111 3455566666 99999888
Q ss_pred HHh
Q 023401 218 KNR 220 (282)
Q Consensus 218 ~~~ 220 (282)
.+.
T Consensus 149 ~~~ 151 (339)
T 3rhz_A 149 RDF 151 (339)
T ss_dssp HHT
T ss_pred HHc
Confidence 764
No 95
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=68.11 E-value=9.3 Score=34.05 Aligned_cols=85 Identities=9% Similarity=0.121 Sum_probs=47.9
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhC-CC-eEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhc
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GT-KVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKG 141 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~-G~-~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k~ 141 (282)
+.--++|++|+||+.+ -||. +=.++++.|.+. |. +|.++... .. . ...+.+++...++..+. -..
T Consensus 13 ~~~~~~~~~k~vlVTG----atG~--iG~~l~~~L~~~~g~~~V~~~~r~-~~---~-~~~~~~~~~~~~v~~~~~Dl~d 81 (344)
T 2gn4_A 13 PNHQNMLDNQTILITG----GTGS--FGKCFVRKVLDTTNAKKIIVYSRD-EL---K-QSEMAMEFNDPRMRFFIGDVRD 81 (344)
T ss_dssp ---CCTTTTCEEEEET----TTSH--HHHHHHHHHHHHCCCSEEEEEESC-HH---H-HHHHHHHHCCTTEEEEECCTTC
T ss_pred ccHHHhhCCCEEEEEC----CCcH--HHHHHHHHHHhhCCCCEEEEEECC-hh---h-HHHHHHHhcCCCEEEEECCCCC
Confidence 3445678899888763 2333 556788888888 97 77777632 21 1 11222333223444442 233
Q ss_pred hhHHH-HhhccCEEEEechhc
Q 023401 142 QETIN-TALKADLIVLNTAVA 161 (282)
Q Consensus 142 ~~~i~-~a~~~DLVIaNT~v~ 161 (282)
..++. ....+|.||-|.+..
T Consensus 82 ~~~l~~~~~~~D~Vih~Aa~~ 102 (344)
T 2gn4_A 82 LERLNYALEGVDICIHAAALK 102 (344)
T ss_dssp HHHHHHHTTTCSEEEECCCCC
T ss_pred HHHHHHHHhcCCEEEECCCCC
Confidence 44454 455799999988654
No 96
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=67.96 E-value=7.4 Score=36.32 Aligned_cols=80 Identities=21% Similarity=0.343 Sum_probs=55.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHH-----
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETI----- 145 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~~i----- 145 (282)
+|++++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++|+++........+
T Consensus 191 ~~~v~Vi-------GgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~ 263 (484)
T 3o0h_A 191 PKSIVIV-------GGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTEN 263 (484)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSS
T ss_pred CCcEEEE-------CcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC
Confidence 6788888 4445678999999999999998874432 235566677888888889998764211111
Q ss_pred ----H----HhhccCEEEEechh
Q 023401 146 ----N----TALKADLIVLNTAV 160 (282)
Q Consensus 146 ----~----~a~~~DLVIaNT~v 160 (282)
. ....+|.||..|-.
T Consensus 264 ~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 264 CYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp SEEEEETTSCEEEESEEEECCCE
T ss_pred EEEEEECCCcEEEcCEEEEeeCC
Confidence 1 12358999987764
No 97
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=67.80 E-value=14 Score=34.01 Aligned_cols=88 Identities=18% Similarity=0.217 Sum_probs=58.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchh-----
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQE----- 143 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~----- 143 (282)
.+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+++.......
T Consensus 148 ~~~~vvVi-------GgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 220 (431)
T 1q1r_A 148 ADNRLVVI-------GGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMS 220 (431)
T ss_dssp TTCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEC
T ss_pred cCCeEEEE-------CCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEec
Confidence 47888888 44456789999999999999988744322 234555667788888898887442111
Q ss_pred -------HHH----HhhccCEEEEechhc--hHHHHH
Q 023401 144 -------TIN----TALKADLIVLNTAVA--GKWLDA 167 (282)
Q Consensus 144 -------~i~----~a~~~DLVIaNT~v~--g~wl~~ 167 (282)
.+. ....+|+||..|-.. ..++++
T Consensus 221 ~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~ 257 (431)
T 1q1r_A 221 TDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASA 257 (431)
T ss_dssp TTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHH
T ss_pred cCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhc
Confidence 111 123589999877543 245554
No 98
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.47 E-value=18 Score=33.25 Aligned_cols=59 Identities=22% Similarity=0.363 Sum_probs=44.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++||++...
T Consensus 170 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 231 (455)
T 1ebd_A 170 PKSLVVI-------GGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTN 231 (455)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 5778887 44456789999999999999998844321 34556666788888889988764
No 99
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=67.29 E-value=16 Score=34.83 Aligned_cols=73 Identities=16% Similarity=0.109 Sum_probs=48.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeehhchhHHHHhhc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISAKGQETINTALK 150 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~k~~~~i~~a~~ 150 (282)
++||+||+|+ |+ -+-...++.|.+.|++|.++..+- ..++ .++.+ .++..+...+... .+.+
T Consensus 10 l~~~~vlVvG------gG-~va~~k~~~L~~~ga~V~vi~~~~---~~~~-----~~l~~~~~i~~~~~~~~~~--~l~~ 72 (457)
T 1pjq_A 10 LRDRDCLIVG------GG-DVAERKARLLLEAGARLTVNALTF---IPQF-----TVWANEGMLTLVEGPFDET--LLDS 72 (457)
T ss_dssp CBTCEEEEEC------CS-HHHHHHHHHHHHTTBEEEEEESSC---CHHH-----HHHHTTTSCEEEESSCCGG--GGTT
T ss_pred CCCCEEEEEC------CC-HHHHHHHHHHHhCcCEEEEEcCCC---CHHH-----HHHHhcCCEEEEECCCCcc--ccCC
Confidence 4789999883 33 367788899999999999998331 2222 33333 4677765544332 2468
Q ss_pred cCEEEEechhc
Q 023401 151 ADLIVLNTAVA 161 (282)
Q Consensus 151 ~DLVIaNT~v~ 161 (282)
+|+||+.|-..
T Consensus 73 ~~lVi~at~~~ 83 (457)
T 1pjq_A 73 CWLAIAATDDD 83 (457)
T ss_dssp CSEEEECCSCH
T ss_pred ccEEEEcCCCH
Confidence 99999998653
No 100
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=67.27 E-value=13 Score=34.67 Aligned_cols=82 Identities=18% Similarity=0.291 Sum_probs=57.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHH----
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETI---- 145 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~~i---- 145 (282)
.+|+|++| |+-..-+|+|..|++.|.+|.++..... ....++...+.+.+.++||++........+
T Consensus 185 ~~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~ 257 (480)
T 3cgb_A 185 KVEDVTII-------GGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNE 257 (480)
T ss_dssp CCCEEEEE-------CCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS
T ss_pred CCCeEEEE-------CCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCC
Confidence 67888888 6677899999999999999998874322 124566667788888889988754211111
Q ss_pred -----H---HhhccCEEEEechhc
Q 023401 146 -----N---TALKADLIVLNTAVA 161 (282)
Q Consensus 146 -----~---~a~~~DLVIaNT~v~ 161 (282)
. ....+|.||..|-..
T Consensus 258 ~v~~v~~~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 258 RVEAVETDKGTYKADLVLVSVGVK 281 (480)
T ss_dssp BEEEEEETTEEEECSEEEECSCEE
T ss_pred cEEEEEECCCEEEcCEEEECcCCC
Confidence 1 123589998877653
No 101
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=67.19 E-value=12 Score=33.31 Aligned_cols=61 Identities=11% Similarity=0.190 Sum_probs=43.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.+.+||+||+| .|.=.||+ -+.+.++.|++.|.+++-++ -..+. .+-.+++.+.|+++..-
T Consensus 145 ~~~~Gk~VLIV-DDvitTG~--Tl~~a~~~L~~~Ga~vv~v~~l~d~~~------~~a~e~l~~~gi~~~sL 207 (243)
T 3dez_A 145 RVTKGQKMVII-EDLISTGG--SVLDAVAAAQREGADVLGVVAIFTYEL------PKATANFEKASVKLVTL 207 (243)
T ss_dssp CCCTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCC------HHHHHHHHHHTCCEEES
T ss_pred ccCCCCEEEEE-EeeccccH--HHHHHHHHHHHCCCEEEEEEEEEECCC------chHHHHHHhcCCCEEEE
Confidence 35789999888 56777787 57789999999999865433 22221 12357777889988855
No 102
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=66.80 E-value=7.1 Score=32.42 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=28.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCe
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTK 106 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~ 106 (282)
.+||+||+| .|.-.||+ -|.+.++.|++.|..
T Consensus 115 ~~gk~VLLV-DDVitTG~--Tl~aa~~~L~~~Ga~ 146 (186)
T 1l1q_A 115 GPHDVVLLH-DDVLATGG--TLLAAIELCETAGVK 146 (186)
T ss_dssp CTTCCEEEE-EEEESSSH--HHHHHHHHHHHTTCC
T ss_pred CCcCEEEEE-ecccccHH--HHHHHHHHHHHcCCC
Confidence 589999887 78888999 677899999999988
No 103
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=66.77 E-value=16 Score=30.75 Aligned_cols=39 Identities=15% Similarity=0.125 Sum_probs=30.8
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
.-++||+||+| .|.=.||+ -|..+++.|++.|...+.++
T Consensus 116 ~~~~gk~VllV-DDvi~TG~--Tl~~a~~~L~~~ga~~V~v~ 154 (208)
T 1wd5_A 116 AARKGRDVVLV-DDGVATGA--SMEAALSVVFQEGPRRVVVA 154 (208)
T ss_dssp CCCTTSEEEEE-CSCBSSCH--HHHHHHHHHHTTCCSEEEEE
T ss_pred CCCCCCEEEEE-CCCccHHH--HHHHHHHHHHHcCCCEEEEE
Confidence 34789998887 78888999 67789999999998744433
No 104
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=66.49 E-value=16 Score=33.75 Aligned_cols=59 Identities=19% Similarity=0.329 Sum_probs=44.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+-..-+|+|..|++.|.+|.++...... .+.++...+.+.+.++||++...
T Consensus 183 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 244 (478)
T 1v59_A 183 PKRLTII-------GGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLS 244 (478)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CceEEEE-------CCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 5778777 44457889999999999999998744321 34556667788888889988754
No 105
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=66.28 E-value=15 Score=32.74 Aligned_cols=63 Identities=17% Similarity=0.186 Sum_probs=40.7
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEE---EeccCCCCchhhhhhhHHHH-HHcCCceeeh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNW---ITIQKPSEEDEVIYSLEHKM-WDRGVQVISA 139 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~v---L~~~~G~~~~~v~~~L~~kl-l~rgI~v~~~ 139 (282)
+.+| +||+| .|.=.||+ -+.+.++.|++.|.+|+- +..+ ++.+.+.... .+++ .+.|+++..-
T Consensus 140 ~~~G-~VliV-DDvitTG~--T~~~a~~~l~~~Ga~vv~v~vlvdr-~egG~~~l~a-~~~~~~~~Gv~v~SL 206 (238)
T 3n2l_A 140 KLEG-RVMLV-DDVITAGT--AIRESMELIQANKADLAGVLVAIDR-QEKGKGELSA-IQEVERDFGCAVISI 206 (238)
T ss_dssp CCCS-EEEEE-CSCCSSSH--HHHHHHHHHHHTTCEEEEEEEEEEC-CCBCSSSSBH-HHHHHHHHCCEEEEE
T ss_pred ccCC-cEEEE-eeeecccH--HHHHHHHHHHHcCCEEEEEEEEEEc-ccCccchhhH-HHHHHHHcCCCEEEE
Confidence 5689 87766 67778888 578889999999998653 3332 2111111122 3445 6789998854
No 106
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=66.13 E-value=7.7 Score=35.92 Aligned_cols=81 Identities=21% Similarity=0.335 Sum_probs=55.9
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCC----CCchhhhhhhHHHHHHcCCceeehhchhHH---
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKP----SEEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G----~~~~~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (282)
+|++++| |+-..-+|+|..|.+. |.+|.++..... ....++...+.+.+.++|+.+.......++
T Consensus 159 ~~~vvVi-------GgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 231 (472)
T 3iwa_A 159 VSKAVIV-------GGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE 231 (472)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc
Confidence 6788887 4445678999999999 999998874432 234566677888888889988754211111
Q ss_pred ------H----HhhccCEEEEechhc
Q 023401 146 ------N----TALKADLIVLNTAVA 161 (282)
Q Consensus 146 ------~----~a~~~DLVIaNT~v~ 161 (282)
. ....+|.||..|-..
T Consensus 232 ~~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 232 NGKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp SSBEEEEEESSCEEECSEEEECSCEE
T ss_pred CCeEEEEEeCCCEEEcCEEEECCCCC
Confidence 1 124589999877654
No 107
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=66.03 E-value=16 Score=30.88 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=43.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeeh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISA 139 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-gI~v~~~ 139 (282)
..++|+|++| |+-..-+|+|..|.+.|.+|.++........ ...+.+++.+. ||.+...
T Consensus 170 ~~~~~~v~vv-------G~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~---~~~~~~~l~~~~gv~i~~~ 229 (338)
T 3itj_A 170 IFRNKPLAVI-------GGGDSACEEAQFLTKYGSKVFMLVRKDHLRA---STIMQKRAEKNEKIEILYN 229 (338)
T ss_dssp GGTTSEEEEE-------CSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHHHHHHHHCTTEEEECS
T ss_pred hcCCCEEEEE-------CCCHHHHHHHHHHHhcCCEEEEEEcCCccCC---CHHHHHHHHhcCCeEEeec
Confidence 4578999998 4555789999999999999999884433211 23456777776 8888754
No 108
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=65.90 E-value=19 Score=32.15 Aligned_cols=81 Identities=17% Similarity=0.196 Sum_probs=55.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHH----
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETI---- 145 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~i---- 145 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++...... ...++...+.+.+.++|+.+........+
T Consensus 145 ~~~v~Vi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~ 217 (384)
T 2v3a_A 145 KRRVLLL-------GAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG 217 (384)
T ss_dssp CCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEET
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC
Confidence 7888887 55567789999999999999998744322 13455567778888889988754211111
Q ss_pred -----H----HhhccCEEEEechhc
Q 023401 146 -----N----TALKADLIVLNTAVA 161 (282)
Q Consensus 146 -----~----~a~~~DLVIaNT~v~ 161 (282)
. ....+|.||..|-..
T Consensus 218 ~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 218 EGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEE
T ss_pred CEEEEEECCCCEEECCEEEECcCCC
Confidence 1 123589999887654
No 109
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=65.84 E-value=10 Score=31.16 Aligned_cols=92 Identities=10% Similarity=-0.043 Sum_probs=51.0
Q ss_pred cccEEEEE-eccCCCCCchHHHHHHHHHHHhCCCe---EEEEe-ccCCC-CchhhhhhhHHHHHHcCCceeehhchhHHH
Q 023401 73 KSKLVLLV-SHELSLSGGPLLLMELAFLLRGVGTK---VNWIT-IQKPS-EEDEVIYSLEHKMWDRGVQVISAKGQETIN 146 (282)
Q Consensus 73 ~~KkILLI-SHELs~TGAPLlLleLA~~Lkq~G~~---V~vL~-~~~G~-~~~~v~~~L~~kll~rgI~v~~~k~~~~i~ 146 (282)
+.++|||| +++--|+ |+.=-=+-.++.+.|.. +.+-+ +-.+. .+..+-+.-.+-+.++||..- . .-+++.
T Consensus 6 ~~~~VLFVCtgN~cRS--pmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~-~ar~l~ 81 (161)
T 1d1q_A 6 PKISVAFIALGNFCRS--PMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-H-KGKQIK 81 (161)
T ss_dssp CCEEEEEEESSSSSHH--HHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-C-CBCBCC
T ss_pred CCCEEEEEcCCcHHHH--HHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-c-eEeECC
Confidence 44689999 5555554 44433334555666754 66555 33221 122333344567777899875 2 222332
Q ss_pred --HhhccCEEEEechhchHHHHHH
Q 023401 147 --TALKADLIVLNTAVAGKWLDAV 168 (282)
Q Consensus 147 --~a~~~DLVIaNT~v~g~wl~~l 168 (282)
....||+||+=+--..+.|.+.
T Consensus 82 ~~~~~~~DlIl~M~~~~~~~l~~~ 105 (161)
T 1d1q_A 82 TKHFDEYDYIIGMDESNINNLKKI 105 (161)
T ss_dssp GGGGGTCSEEEESSHHHHHHHHHH
T ss_pred HHHHhhCCEEEEeCHHHHHHHHHH
Confidence 3578999998665545555433
No 110
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=65.78 E-value=13 Score=30.90 Aligned_cols=55 Identities=16% Similarity=0.187 Sum_probs=41.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~ 138 (282)
.++|+|++| |+-..-+|+|..|.+.| +|.++..... .+...+.+.+.++||.+..
T Consensus 139 ~~~~~v~vv-------G~G~~~~e~a~~l~~~g-~v~~v~~~~~----~~~~~~~~~l~~~gv~i~~ 193 (297)
T 3fbs_A 139 LDQGKIGVI-------AASPMAIHHALMLPDWG-ETTFFTNGIV----EPDADQHALLAARGVRVET 193 (297)
T ss_dssp GTTCEEEEE-------CCSTTHHHHHHHGGGTS-EEEEECTTTC----CCCHHHHHHHHHTTCEEEC
T ss_pred hcCCEEEEE-------ecCccHHHHHHHhhhcC-cEEEEECCCC----CCCHHHHHHHHHCCcEEEc
Confidence 468999998 44446789999999999 9988874433 2334567888888998874
No 111
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=65.71 E-value=28 Score=28.51 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=42.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
+++|+||+.. -+| -+=.++++.|.+.|++|.++..+..+.. ..+.+++.+.+.++. +-....+++
T Consensus 3 l~~~~vlItG----asg--giG~~~a~~l~~~G~~V~~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (247)
T 2hq1_A 3 LKGKTAIVTG----SSR--GLGKAIAWKLGNMGANIVLNGSPASTSL----DATAEEFKAAGINVVVAKGDVKNPEDVEN 72 (247)
T ss_dssp TTTCEEEESS----CSS--HHHHHHHHHHHHTTCEEEEEECTTCSHH----HHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCCcEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEcCcCHHHH----HHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4577665532 222 2556889999999999988854433211 123344444443332 112222332
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
....+|.||.|..+.
T Consensus 73 ~~~~~~~~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 73 MVKTAMDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHHHHHHSCCCEEEECC---
T ss_pred HHHHHHHhcCCCCEEEECCCCC
Confidence 123799999998654
No 112
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=65.71 E-value=9.7 Score=33.42 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=28.0
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 76 kILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
+||+++. ...|-=.-++.||+.|++.|++|.+++.
T Consensus 2 rIl~~~~--~~~Gh~~p~~~la~~L~~~Gh~V~~~~~ 36 (384)
T 2p6p_A 2 RILFVAA--GSPATVFALAPLATAARNAGHQVVMAAN 36 (384)
T ss_dssp EEEEECC--SSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeC--CccchHhHHHHHHHHHHHCCCEEEEEeC
Confidence 6888865 2346666788999999999999999984
No 113
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=65.65 E-value=7.5 Score=31.81 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=29.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
+.+||+||+| .|.-.||+ -|.+.++.|++.|..++
T Consensus 117 ~~~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~v 151 (180)
T 1zn8_A 117 LEPGQRVVVV-DDLLATGG--TMNAACELLGRLQAEVL 151 (180)
T ss_dssp SCTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEE-cCCcccHH--HHHHHHHHHHHcCCEEE
Confidence 4789998887 78888999 67789999999998854
No 114
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=65.42 E-value=7.1 Score=35.87 Aligned_cols=42 Identities=19% Similarity=0.254 Sum_probs=33.2
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
-++||+||+| .|.-.||+ -|.+.++.|++.|...+.+..-+|
T Consensus 214 ~v~gk~VlLV-DDiitTG~--Tl~~aa~~Lk~~Ga~~V~~~~tH~ 255 (317)
T 1dku_A 214 NIEGKTAILI-DDIIDTAG--TITLAANALVENGAKEVYACCTHP 255 (317)
T ss_dssp CCTTCEEEEE-CSEESSCH--HHHHHHHHHHHTTCSEEEEECSEE
T ss_pred cCCCCEEEEE-ecccCCCH--HHHHHHHHHHHcCCcEEEEEEECc
Confidence 4789988876 77778999 677999999999998666665444
No 115
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=65.35 E-value=25 Score=30.30 Aligned_cols=75 Identities=15% Similarity=0.185 Sum_probs=47.1
Q ss_pred CchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhc-------hhHH-H--HhhccCE
Q 023401 88 GGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKG-------QETI-N--TALKADL 153 (282)
Q Consensus 88 GAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k~-------~~~i-~--~a~~~DL 153 (282)
|.|-.+..+...|.+. +++++.+..++++. +..+...+.|||++. .+. .+++ + ...++|+
T Consensus 12 G~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~------~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dl 85 (212)
T 3av3_A 12 GSGTNFQAIVDAAKRGDLPARVALLVCDRPGA------KVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQIDW 85 (212)
T ss_dssp SSCHHHHHHHHHHHTTCCCEEEEEEEESSTTC------HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCc------HHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcCCCE
Confidence 4455788888888877 67887777664421 456778888999983 211 1122 2 3567999
Q ss_pred EEEec---hhchHHHHHH
Q 023401 154 IVLNT---AVAGKWLDAV 168 (282)
Q Consensus 154 VIaNT---~v~g~wl~~l 168 (282)
|++-. ++....++.+
T Consensus 86 iv~a~y~~il~~~~l~~~ 103 (212)
T 3av3_A 86 IALAGYMRLIGPTLLSAY 103 (212)
T ss_dssp EEESSCCSCCCHHHHHHT
T ss_pred EEEchhhhhCCHHHHhhh
Confidence 99743 4444555533
No 116
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=65.26 E-value=41 Score=30.00 Aligned_cols=84 Identities=17% Similarity=0.084 Sum_probs=54.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHh-CCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhch----hHHHH
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ----ETINT 147 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq-~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~----~~i~~ 147 (282)
+|+.|.+++. +.+|---++..||..++. .|..|.++...-. .......|.......|+++...... ..+..
T Consensus 104 ~g~vi~lvG~--~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~--r~~a~eqL~~~~~~~gl~~~~~~~~~~l~~al~~ 179 (296)
T 2px0_A 104 HSKYIVLFGS--TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY--RIAAVEQLKTYAELLQAPLEVCYTKEEFQQAKEL 179 (296)
T ss_dssp CSSEEEEEES--TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS--STTHHHHHHHHHTTTTCCCCBCSSHHHHHHHHHH
T ss_pred CCcEEEEECC--CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc--cchHHHHHHHHHHhcCCCeEecCCHHHHHHHHHH
Confidence 5788889987 689999999999999985 8999988874321 1111111222222246766543221 22334
Q ss_pred hhccCEEEEechh
Q 023401 148 ALKADLIVLNTAV 160 (282)
Q Consensus 148 a~~~DLVIaNT~v 160 (282)
+.++|+||+-|.-
T Consensus 180 ~~~~dlvIiDT~G 192 (296)
T 2px0_A 180 FSEYDHVFVDTAG 192 (296)
T ss_dssp GGGSSEEEEECCC
T ss_pred hcCCCEEEEeCCC
Confidence 6889999999873
No 117
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=65.26 E-value=46 Score=27.56 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=28.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
++++|-+|..+++..--.-++-.+...+++.|+++.+....
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 46 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDAN 46 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45678888777654444445666778888889998887643
No 118
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=65.13 E-value=17 Score=34.13 Aligned_cols=81 Identities=17% Similarity=0.251 Sum_probs=55.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh-------
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE------- 143 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~------- 143 (282)
+|+|++| |+-..-+|+|..|.+.|.+|.++..... ..+.++...+.+.+.++||++.......
T Consensus 176 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 248 (500)
T 1onf_A 176 SKKIGIV-------GSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSD 248 (500)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESST
T ss_pred CCeEEEE-------CChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC
Confidence 5778877 5555789999999999999999984332 1345666677888888999887542111
Q ss_pred ---HHH----Hh-hccCEEEEechhc
Q 023401 144 ---TIN----TA-LKADLIVLNTAVA 161 (282)
Q Consensus 144 ---~i~----~a-~~~DLVIaNT~v~ 161 (282)
.+. .. ..+|+||.-|-..
T Consensus 249 ~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 249 KNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp TCEEEEETTSCEEEEESEEEECCCBC
T ss_pred ceEEEEECCCcEEEECCEEEECCCCC
Confidence 111 11 4689999876643
No 119
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=64.96 E-value=18 Score=33.58 Aligned_cols=59 Identities=24% Similarity=0.371 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+-..-+|+|..|++.|.+|.++..... ....++...+.+.+.++||++...
T Consensus 169 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~ 230 (464)
T 2eq6_A 169 PKRLLVI-------GGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTK 230 (464)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcC
Confidence 5788887 4445678999999999999999874432 134556667788888889988754
No 120
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=64.93 E-value=17 Score=33.46 Aligned_cols=59 Identities=22% Similarity=0.456 Sum_probs=44.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+.++||++...
T Consensus 171 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 232 (464)
T 2a8x_A 171 PKSIIIA-------GAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTA 232 (464)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred CCeEEEE-------CCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeC
Confidence 5777777 45567889999999999999998744321 34556666788888889988754
No 121
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=64.92 E-value=16 Score=30.08 Aligned_cols=94 Identities=15% Similarity=0.060 Sum_probs=52.0
Q ss_pred ccccEEEEEe-ccCCCCCchHHHHHHHHHHHhCCCe--EEEEe-ccCCC-CchhhhhhhHHHHHHcCCceeehhchhHH-
Q 023401 72 MKSKLVLLVS-HELSLSGGPLLLMELAFLLRGVGTK--VNWIT-IQKPS-EEDEVIYSLEHKMWDRGVQVISAKGQETI- 145 (282)
Q Consensus 72 ~~~KkILLIS-HELs~TGAPLlLleLA~~Lkq~G~~--V~vL~-~~~G~-~~~~v~~~L~~kll~rgI~v~~~k~~~~i- 145 (282)
|+.++||||. ++--| .|+.=-=+-.++.+.|.. +.+-+ +-.+. .+..+-+.-.+-+.++||+. ..+. +++
T Consensus 3 ~~~~~vLFVC~gN~cR--SpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~~a-r~l~ 78 (157)
T 3n8i_A 3 QATKSVLFVCLGNICR--SPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM-SHVA-RQIT 78 (157)
T ss_dssp -CCEEEEEEESSSSSH--HHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC-CCCC-CBCC
T ss_pred CCCCEEEEECCCchhH--HHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC-CCce-eECC
Confidence 4567899995 44444 344433334556666753 55555 32221 11233334456677789997 4322 223
Q ss_pred -HHhhccCEEEEechhchHHHHHHh
Q 023401 146 -NTALKADLIVLNTAVAGKWLDAVL 169 (282)
Q Consensus 146 -~~a~~~DLVIaNT~v~g~wl~~l~ 169 (282)
....+||+||+=+--....+.+..
T Consensus 79 ~~~~~~~DlIi~M~~~n~~~l~~~~ 103 (157)
T 3n8i_A 79 KEDFATFDYILCMDESNLRDLNRKS 103 (157)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEeCcHHHHHHHHHC
Confidence 246789999987665555555443
No 122
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=64.87 E-value=63 Score=27.25 Aligned_cols=40 Identities=15% Similarity=-0.028 Sum_probs=27.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|.++|-+|..+++..--.-++-.+...+++.|+++.+...
T Consensus 1 k~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 40 (313)
T 3m9w_A 1 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 40 (313)
T ss_dssp --CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECC
Confidence 3466777777766665555666777888888888887764
No 123
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=64.75 E-value=17 Score=33.71 Aligned_cols=80 Identities=21% Similarity=0.260 Sum_probs=55.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeehhchh-------
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISAKGQE------- 143 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~k~~~------- 143 (282)
+|+|++| |+-..-+|+|..|++.|.+|.++...... .+.++...+.+.+.++||++.......
T Consensus 166 ~~~vvVv-------GgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 238 (463)
T 2r9z_A 166 PKRVAII-------GAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQ 238 (463)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETT
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 5778887 56668899999999999999998854321 244566677888888899887542111
Q ss_pred --HHH----H-hhccCEEEEechh
Q 023401 144 --TIN----T-ALKADLIVLNTAV 160 (282)
Q Consensus 144 --~i~----~-a~~~DLVIaNT~v 160 (282)
.+. . ...+|+||..|-.
T Consensus 239 ~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 239 GTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp EEEEEETTCCEEEEESEEEECSCE
T ss_pred eEEEEEeCCcEEEEcCEEEECCCC
Confidence 111 1 2468999887654
No 124
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=64.73 E-value=48 Score=27.42 Aligned_cols=41 Identities=5% Similarity=-0.101 Sum_probs=28.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
++++|-+|..+.+..--.-++-.+...+++.|+++.+....
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 44 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAG 44 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 56788888887654322335566778899999999888643
No 125
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=64.69 E-value=9.5 Score=34.15 Aligned_cols=39 Identities=10% Similarity=0.096 Sum_probs=30.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|.-++|++++.- ..|-=.-++.||+.|++.|++|.+++.
T Consensus 10 m~~~~Il~~~~~--~~GHv~p~l~la~~L~~~Gh~V~~~~~ 48 (424)
T 2iya_A 10 VTPRHISFFNIP--GHGHVNPSLGIVQELVARGHRVSYAIT 48 (424)
T ss_dssp -CCCEEEEECCS--CHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccceEEEEeCC--CCcccchHHHHHHHHHHCCCeEEEEeC
Confidence 444689998653 347777889999999999999999984
No 126
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=64.53 E-value=17 Score=33.50 Aligned_cols=80 Identities=19% Similarity=0.235 Sum_probs=54.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh-------
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE------- 143 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~------- 143 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++..... ..+.++...+.+.+.++|+.+.......
T Consensus 167 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~ 239 (450)
T 1ges_A 167 PERVAVV-------GAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD 239 (450)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 5788888 5556789999999999999999874422 1344566677888888898887542111
Q ss_pred ---HHH----HhhccCEEEEechh
Q 023401 144 ---TIN----TALKADLIVLNTAV 160 (282)
Q Consensus 144 ---~i~----~a~~~DLVIaNT~v 160 (282)
.+. ....+|+||..|-.
T Consensus 240 ~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 240 GSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp SCEEEEETTSCEEEESEEEECSCE
T ss_pred cEEEEEECCCcEEEcCEEEECCCC
Confidence 111 12358999887654
No 127
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=64.50 E-value=7.6 Score=31.49 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=29.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
.+||+||+| .|.-.||+ -|.+.++.|++.|...+
T Consensus 118 v~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~V 151 (175)
T 1vch_A 118 LLNQRVVLV-SDVVASGE--TMRAMEKMVLRAGGHVV 151 (175)
T ss_dssp HTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEE
T ss_pred cCCCEEEEE-eccccchH--HHHHHHHHHHHcCCeEE
Confidence 589999888 78888999 67789999999998854
No 128
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=64.34 E-value=18 Score=33.37 Aligned_cols=59 Identities=12% Similarity=0.235 Sum_probs=44.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC----CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP----SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G----~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+=..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++||++...
T Consensus 178 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~ 240 (474)
T 1zmd_A 178 PEKMVVI-------GAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLN 240 (474)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECS
T ss_pred CceEEEE-------CCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeC
Confidence 5778887 4445678999999999999999874432 224556667788888889988754
No 129
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=64.12 E-value=14 Score=32.23 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=44.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-CchhhhhhhHHHHHHcCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.++|+|++| |+-..-+|+|..|++.|.+|.++...... ..++....|.+.+.++||++...
T Consensus 161 ~~~~~vvVv-------G~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~ 222 (360)
T 3ab1_A 161 FKGKRVVIV-------GGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLE 222 (360)
T ss_dssp GTTCEEEEE-------CSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCSHHHHSSHHHHHHTSEEEESS
T ss_pred cCCCcEEEE-------CCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCHHHHHHHHHHhhcCceEEEcC
Confidence 367888887 55567889999999999999998844321 23345556777777778887654
No 130
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=64.09 E-value=6.5 Score=34.45 Aligned_cols=114 Identities=15% Similarity=0.077 Sum_probs=65.2
Q ss_pred ccccEEEEEeccCCCCCchHH-HHHHHHHHHhCCCeEEEEeccCCCCch-hhhhh--hHHHHHH-cCCceeehhch-hHH
Q 023401 72 MKSKLVLLVSHELSLSGGPLL-LMELAFLLRGVGTKVNWITIQKPSEED-EVIYS--LEHKMWD-RGVQVISAKGQ-ETI 145 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLl-LleLA~~Lkq~G~~V~vL~~~~G~~~~-~v~~~--L~~kll~-rgI~v~~~k~~-~~i 145 (282)
+++|+|++- .+.++|.+- ..++++.|++.|++|.++..+.+.... .++.+ ....+.. .|-+++.+... +-+
T Consensus 3 l~~k~Illg---iTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl~~f~~~~~~~~~l~~ltg~~v~~~~~~~~hi 79 (207)
T 3mcu_A 3 LKGKRIGFG---FTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKKIEEITGFKAINSIVGAEPL 79 (207)
T ss_dssp CTTCEEEEE---ECSCGGGGTTSHHHHHHHHHTTCEEEEEECC------------CHHHHHHHHHSSSCCBCSHHHHGGG
T ss_pred CCCCEEEEE---EEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHHHHhcCchhHHHHHHHHhCCceEeecCccccc
Confidence 567888764 234456554 679999999999999999977663100 11111 0022322 25666655321 223
Q ss_pred HHhhccCEEEE-----echhc----------hHHHHHHhhccCCCCCCceEEEeeeccccccc
Q 023401 146 NTALKADLIVL-----NTAVA----------GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK 193 (282)
Q Consensus 146 ~~a~~~DLVIa-----NT~v~----------g~wl~~l~~~~~~~~~~pVIWWIHE~r~~Yf~ 193 (282)
.....+|++++ ||+.. ....+..++++. |++--.=|+...|-.
T Consensus 80 ~ls~~aD~mvIaPaTanTlAKiA~GiaDnLlt~aa~~~L~~~~-----plvlaPamn~~m~~h 137 (207)
T 3mcu_A 80 GPKIPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGK-----PVVLAVSTNDALGLN 137 (207)
T ss_dssp TTTSCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTC-----CEEEEEEETTTTTTT
T ss_pred ccchhcCEEEEecCCHHHHHHHHccccCcHHHHHHHHHHhcCC-----CEEEEECCChhHHHH
Confidence 34677999885 55432 233445666766 788777777666654
No 131
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=64.08 E-value=50 Score=29.52 Aligned_cols=85 Identities=20% Similarity=0.267 Sum_probs=54.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------hhH
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------QET 144 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~--------~~~ 144 (282)
+++.|.+++ .+.+|---++..||..+.+.|..|.++...-. .......|.....+.|++++.... .+.
T Consensus 97 ~~~vi~i~G--~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~--r~~a~~ql~~~~~~~~v~v~~~~~~~~p~~~~~~~ 172 (297)
T 1j8m_F 97 IPYVIMLVG--VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVY--RPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRG 172 (297)
T ss_dssp SSEEEEEEC--SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCS--SSHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHH
T ss_pred CCeEEEEEC--CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCC--CHHHHHHHHHHhccCCeEEEecCCCCCHHHHHHHH
Confidence 356666665 48889999999999999999999988873321 111111222223345888876421 123
Q ss_pred HHHh--hccCEEEEechhc
Q 023401 145 INTA--LKADLIVLNTAVA 161 (282)
Q Consensus 145 i~~a--~~~DLVIaNT~v~ 161 (282)
+..+ .++|+||.-|.-.
T Consensus 173 l~~~~~~~~D~ViIDTpg~ 191 (297)
T 1j8m_F 173 VEKFLSEKMEIIIVDTAGR 191 (297)
T ss_dssp HHHHHHTTCSEEEEECCCS
T ss_pred HHHHHhCCCCEEEEeCCCC
Confidence 3333 6799999999743
No 132
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=64.04 E-value=10 Score=37.52 Aligned_cols=85 Identities=19% Similarity=0.212 Sum_probs=55.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC----chhhhhhhHHHHHHcCCceeehhchhHHH
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE----EDEVIYSLEHKMWDRGVQVISAKGQETIN 146 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~----~~~v~~~L~~kll~rgI~v~~~k~~~~i~ 146 (282)
.-+||+|++|. .|+-..-+|+|..|.+.|.+|.++....... .......+.+.+.++||++........+.
T Consensus 520 ~~~g~~VvViG-----~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 594 (690)
T 3k30_A 520 LPDGKKVVVYD-----DDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVG 594 (690)
T ss_dssp CCSSSEEEEEE-----CSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred CCCCCEEEEEc-----CCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEE
Confidence 34678899985 2344456899999999999999998443221 12234456788888899988653222221
Q ss_pred --------------HhhccCEEEEechh
Q 023401 147 --------------TALKADLIVLNTAV 160 (282)
Q Consensus 147 --------------~a~~~DLVIaNT~v 160 (282)
....+|.||..|-.
T Consensus 595 ~~~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 595 AGGVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp TTEEEEEETTTCCEEEEECSEEEEESCE
T ss_pred CCeEEEEEccCCeEEEEECCEEEECCCC
Confidence 12347888876654
No 133
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=63.95 E-value=18 Score=30.28 Aligned_cols=58 Identities=22% Similarity=0.282 Sum_probs=40.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHH-HHcCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKM-WDRGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kl-l~rgI~v~~~ 139 (282)
.++|++++| |+-..-+|+|..|++.|.+|.++........++ .+.+++ .++||++...
T Consensus 145 ~~~~~v~vi-------G~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~---~~~~~~~~~~gv~~~~~ 203 (315)
T 3r9u_A 145 YKNKEVAVL-------GGGDTALEEALYLANICSKIYLIHRRDEFRAAP---STVEKVKKNEKIELITS 203 (315)
T ss_dssp GTTSEEEEE-------CCBHHHHHHHHHHHTTSSEEEEECSSSSCBSCH---HHHHHHHHCTTEEEECS
T ss_pred cCcCEEEEE-------CCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCCH---HHHHHHHhcCCeEEEeC
Confidence 468899998 555678999999999999999887543321111 223444 4568888754
No 134
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=63.94 E-value=25 Score=30.35 Aligned_cols=64 Identities=14% Similarity=0.144 Sum_probs=40.9
Q ss_pred CchHHHHHHHHHHHhCCC--eEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhc-------hhHH-H--HhhccCE
Q 023401 88 GGPLLLMELAFLLRGVGT--KVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKG-------QETI-N--TALKADL 153 (282)
Q Consensus 88 GAPLlLleLA~~Lkq~G~--~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k~-------~~~i-~--~a~~~DL 153 (282)
|.+-.+..+...|.+.++ +++.+..+.+.. ...+...+.|||++. .+. .+++ + ...++|+
T Consensus 10 G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dl 83 (216)
T 2ywr_A 10 GRGSNLQAIIDAIESGKVNASIELVISDNPKA------YAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKGVEL 83 (216)
T ss_dssp SCCHHHHHHHHHHHTTSSCEEEEEEEESCTTC------HHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCh------HHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhcCCCE
Confidence 445578888888888777 776666554421 345677888999983 211 1222 2 2567999
Q ss_pred EEEe
Q 023401 154 IVLN 157 (282)
Q Consensus 154 VIaN 157 (282)
|++-
T Consensus 84 iv~a 87 (216)
T 2ywr_A 84 VVLA 87 (216)
T ss_dssp EEES
T ss_pred EEEe
Confidence 9864
No 135
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=63.81 E-value=25 Score=32.39 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=28.4
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
++|.-|+||+++ |++ .-..+++.+++.|++++++...
T Consensus 2 n~m~~~kiLI~g------~g~-~a~~i~~aa~~~G~~~v~v~~~ 38 (446)
T 3ouz_A 2 NAMEIKSILIAN------RGE-IALRALRTIKEMGKKAICVYSE 38 (446)
T ss_dssp CTTCCCEEEECC------CHH-HHHHHHHHHHHTTCEEEEEEEG
T ss_pred CccccceEEEEC------CCH-HHHHHHHHHHHcCCEEEEEEcC
Confidence 467778888863 445 4568999999999999998743
No 136
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=63.74 E-value=39 Score=27.72 Aligned_cols=79 Identities=20% Similarity=0.156 Sum_probs=44.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~--~~k~~~~i~- 146 (282)
|++|+||+. +-+| -+=.++++.|.+.|++|.++.....+.. ..+.+++...+..+ + +-...++++
T Consensus 5 l~~k~vlVT----Gasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 74 (258)
T 3afn_B 5 LKGKRVLIT----GSSQ--GIGLATARLFARAGAKVGLHGRKAPANI----DETIASMRADGGDAAFFAADLATSEACQQ 74 (258)
T ss_dssp GTTCEEEET----TCSS--HHHHHHHHHHHHTTCEEEEEESSCCTTH----HHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEe----CCCC--hHHHHHHHHHHHCCCEEEEECCCchhhH----HHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 567876653 2222 2556889999999999888764423211 12334444444332 2 112223332
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
....+|.||.|..+
T Consensus 75 ~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 75 LVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 12379999999875
No 137
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=63.60 E-value=46 Score=32.49 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=56.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh-c-------hhH
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK-G-------QET 144 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k-~-------~~~ 144 (282)
+.+.|+++++ ..+|=--+...||..|++.|..|.++...-- ....+..|...-.+.|++++... . .+.
T Consensus 100 ~~~vI~ivG~--~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~--r~aa~~qL~~~~~~~~i~v~~~~~~~dp~~i~~~a 175 (504)
T 2j37_W 100 KQNVIMFVGL--QGSGKTTTCSKLAYYYQRKGWKTCLICADTF--RAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEG 175 (504)
T ss_dssp --EEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCS--SSHHHHHHHHHHHHHTCCEEECCCCSCHHHHHHHH
T ss_pred CCeEEEEECC--CCCCHHHHHHHHHHHHHhCCCeEEEEecccc--chhHHHHHHHHhhccCceEEccCCCCCHHHHHHHH
Confidence 3567888888 6889999999999999999999999985321 11121223333344588877631 1 123
Q ss_pred HHHh--hccCEEEEechhch
Q 023401 145 INTA--LKADLIVLNTAVAG 162 (282)
Q Consensus 145 i~~a--~~~DLVIaNT~v~g 162 (282)
+..+ .++|+||+-|+-..
T Consensus 176 l~~~~~~~~DvvIIDTpG~~ 195 (504)
T 2j37_W 176 VEKFKNENFEIIIVDTSGRH 195 (504)
T ss_dssp HHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHCCCcEEEEeCCCCc
Confidence 3333 67999999998543
No 138
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=63.59 E-value=58 Score=29.37 Aligned_cols=90 Identities=19% Similarity=0.157 Sum_probs=58.9
Q ss_pred cccc--ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh--ch-
Q 023401 68 PLSF--MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--GQ- 142 (282)
Q Consensus 68 ~~~f--~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k--~~- 142 (282)
|++| -+++.|++++. +.+|---++..||..++..|..|.++...-- .......|..-..+.|++++... ++
T Consensus 96 ~~~~~~~~~~vi~ivG~--~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~--r~~a~eqL~~~~~~~gl~~~~~~s~~~~ 171 (306)
T 1vma_A 96 KLNVPPEPPFVIMVVGV--NGTGKTTSCGKLAKMFVDEGKSVVLAAADTF--RAAAIEQLKIWGERVGATVISHSEGADP 171 (306)
T ss_dssp CCCCCSSSCEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECTT--CHHHHHHHHHHHHHHTCEEECCSTTCCH
T ss_pred CCcccCCCCeEEEEEcC--CCChHHHHHHHHHHHHHhcCCEEEEEccccc--cHHHHHHHHHHHHHcCCcEEecCCccCH
Confidence 4554 35677888885 8999999999999999999999988773311 11122223333444588887541 11
Q ss_pred --h---HHH--HhhccCEEEEechhc
Q 023401 143 --E---TIN--TALKADLIVLNTAVA 161 (282)
Q Consensus 143 --~---~i~--~a~~~DLVIaNT~v~ 161 (282)
. .+. ...++|+||+-|.-.
T Consensus 172 ~~v~~~al~~a~~~~~dvvIiDtpg~ 197 (306)
T 1vma_A 172 AAVAFDAVAHALARNKDVVIIDTAGR 197 (306)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 1 222 356799999999843
No 139
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=63.59 E-value=11 Score=29.75 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=42.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-Hh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TA 148 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a 148 (282)
|.+|+||++ +-||. +=-++++.|.+.|++|.++..+... +. .....++.++.. ....++. ..
T Consensus 1 M~~~~ilVt----GatG~--iG~~l~~~l~~~g~~V~~~~r~~~~--------~~-~~~~~~~~~~~~D~~~~~~~~~~~ 65 (206)
T 1hdo_A 1 MAVKKIAIF----GATGQ--TGLTTLAQAVQAGYEVTVLVRDSSR--------LP-SEGPRPAHVVVGDVLQAADVDKTV 65 (206)
T ss_dssp CCCCEEEEE----STTSH--HHHHHHHHHHHTTCEEEEEESCGGG--------SC-SSSCCCSEEEESCTTSHHHHHHHH
T ss_pred CCCCEEEEE----cCCcH--HHHHHHHHHHHCCCeEEEEEeChhh--------cc-cccCCceEEEEecCCCHHHHHHHH
Confidence 445676664 23333 5668889999999999988743221 00 011234444422 2334443 45
Q ss_pred hccCEEEEechh
Q 023401 149 LKADLIVLNTAV 160 (282)
Q Consensus 149 ~~~DLVIaNT~v 160 (282)
.++|.||.|...
T Consensus 66 ~~~d~vi~~a~~ 77 (206)
T 1hdo_A 66 AGQDAVIVLLGT 77 (206)
T ss_dssp TTCSEEEECCCC
T ss_pred cCCCEEEECccC
Confidence 679999988764
No 140
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=63.35 E-value=38 Score=32.15 Aligned_cols=89 Identities=21% Similarity=0.220 Sum_probs=56.4
Q ss_pred cccccc--ccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc---
Q 023401 68 PLSFMK--SKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--- 141 (282)
Q Consensus 68 ~~~f~~--~KkILLISHELs~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~--- 141 (282)
|+.+-+ .+.|++++ .+.+|=--+...||..|.+. |..|.++.+.-. ....+..|...-...|++++....
T Consensus 92 ~~~~~~~~~~vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~--r~~a~~ql~~~~~~~~l~v~~~~~~~d 167 (433)
T 2xxa_A 92 TLNLAAQPPAVVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVY--RPAAIKQLETLAEQVGVDFFPSDVGQK 167 (433)
T ss_dssp CCCCCSSSSEEEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCS--STTHHHHHHHHHHHHTCEECCCCSSSC
T ss_pred cccccCCCCeEEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCC--CccHHHHHHhhcccCCeeEEeCCCCCC
Confidence 455532 34566666 48899999999999999999 999998884421 111111222223345888876421
Q ss_pred -----hhHHHHh--hccCEEEEechh
Q 023401 142 -----QETINTA--LKADLIVLNTAV 160 (282)
Q Consensus 142 -----~~~i~~a--~~~DLVIaNT~v 160 (282)
.+.+..+ .++|+||+-|.-
T Consensus 168 p~~i~~~~l~~~~~~~~D~VIIDTpG 193 (433)
T 2xxa_A 168 PVDIVNAALKEAKLKFYDVLLVDTAG 193 (433)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 1233333 479999999963
No 141
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=62.84 E-value=19 Score=30.39 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=40.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~ 139 (282)
..+|+|++| |+-..-+|+|..|.+.|.+|.++........+ ..+.+++.+ +||++...
T Consensus 141 ~~~~~v~Vv-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---~~~~~~l~~~~gv~v~~~ 199 (311)
T 2q0l_A 141 YKNKEVAVL-------GGGDTAVEEAIYLANICKKVYLIHRRDGFRCA---PITLEHAKNNDKIEFLTP 199 (311)
T ss_dssp GTTSEEEEE-------CCSHHHHHHHHHHHTTSSEEEEECSSSSCCSC---HHHHHHHHTCTTEEEETT
T ss_pred cCCCEEEEE-------CCCHHHHHHHHHHHhcCCEEEEEeeCCccCCC---HHHHHHHhhCCCeEEEeC
Confidence 367899988 55568899999999999999988744322111 234566664 68887754
No 142
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=62.84 E-value=43 Score=28.92 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=48.4
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh---h--c----hh
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA---K--G----QE 143 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~---k--~----~~ 143 (282)
|-++|+|..-+ -|-.|...+++. +++++.+..+.+.. ...+...+.|||++.- + . .+
T Consensus 2 ri~vl~Sg~gs------nl~ali~~~~~~~~~~~i~~Vis~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~ 69 (212)
T 1jkx_A 2 NIVVLISGNGS------NLQAIIDACKTNKIKGTVRAVFSNKADA------FGLERARQAGIATHTLIASAFDSREAYDR 69 (212)
T ss_dssp EEEEEESSCCH------HHHHHHHHHHTTSSSSEEEEEEESCTTC------HHHHHHHHTTCEEEECCGGGCSSHHHHHH
T ss_pred EEEEEEECCcH------HHHHHHHHHHcCCCCceEEEEEeCCCch------HHHHHHHHcCCcEEEeCcccccchhhccH
Confidence 45677776554 355666666665 57887777664421 2356777889999852 1 1 12
Q ss_pred HH-H--HhhccCEEEEec---hhchHHHHH
Q 023401 144 TI-N--TALKADLIVLNT---AVAGKWLDA 167 (282)
Q Consensus 144 ~i-~--~a~~~DLVIaNT---~v~g~wl~~ 167 (282)
++ + ...++|+|++-. ++....++.
T Consensus 70 ~~~~~l~~~~~Dliv~agy~~il~~~~l~~ 99 (212)
T 1jkx_A 70 ELIHEIDMYAPDVVVLAGFMRILSPAFVSH 99 (212)
T ss_dssp HHHHHHGGGCCSEEEESSCCSCCCHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeChhhhCCHHHHhh
Confidence 22 2 356799999753 344455553
No 143
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=62.56 E-value=17 Score=30.37 Aligned_cols=45 Identities=13% Similarity=0.219 Sum_probs=29.2
Q ss_pred CCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 65 KSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 65 ~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
++.+....++|+||+..=-.+ .=+=.++|+.|.+.|+.|.++...
T Consensus 5 ~~~~~~~~~~k~vlITGa~~~----~giG~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 5 HHHHMGFLDGKRILLTGLLSN----RSIAYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp ----CCTTTTCEEEECCCCST----TSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCccccCCCEEEEeCCCCC----CcHHHHHHHHHHHcCCCEEEEecc
Confidence 356778889998887531100 225568999999999998887644
No 144
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=62.48 E-value=8.7 Score=30.35 Aligned_cols=35 Identities=26% Similarity=0.273 Sum_probs=28.9
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
..+||+||+| .|.-.||+ -|.+.++.|++.|...+
T Consensus 80 ~~~gk~VllV-DDvitTG~--Tl~~a~~~L~~~ga~~v 114 (153)
T 1vdm_A 80 DLKDKRVVIV-DDVSDTGK--TLEVVIEEVKKLGAKEI 114 (153)
T ss_dssp CCBTCEEEEE-EEEESSCH--HHHHHHHHHHTTTBSEE
T ss_pred CCCCCEEEEE-ecccCChH--HHHHHHHHHHHcCCCEE
Confidence 4689998887 78888998 67789999999998744
No 145
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=62.36 E-value=4.9 Score=30.01 Aligned_cols=72 Identities=11% Similarity=0.167 Sum_probs=41.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-hchhHHHH--h
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-KGQETINT--A 148 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~-~-k~~~~i~~--a 148 (282)
++++|++++ ++..| ..+++.|.+.|++|.++... . .. .+++.+.|..++. + ...+.+.. .
T Consensus 5 ~~~~v~I~G--~G~iG-----~~~a~~l~~~g~~v~~~d~~-~---~~-----~~~~~~~~~~~~~~d~~~~~~l~~~~~ 68 (144)
T 2hmt_A 5 KNKQFAVIG--LGRFG-----GSIVKELHRMGHEVLAVDIN-E---EK-----VNAYASYATHAVIANATEENELLSLGI 68 (144)
T ss_dssp -CCSEEEEC--CSHHH-----HHHHHHHHHTTCCCEEEESC-H---HH-----HHTTTTTCSEEEECCTTCHHHHHTTTG
T ss_pred cCCcEEEEC--CCHHH-----HHHHHHHHHCCCEEEEEeCC-H---HH-----HHHHHHhCCEEEEeCCCCHHHHHhcCC
Confidence 467788886 24334 45678888999998776522 2 11 1233344665542 2 22233432 4
Q ss_pred hccCEEEEechh
Q 023401 149 LKADLIVLNTAV 160 (282)
Q Consensus 149 ~~~DLVIaNT~v 160 (282)
.++|.||.+|-.
T Consensus 69 ~~~d~vi~~~~~ 80 (144)
T 2hmt_A 69 RNFEYVIVAIGA 80 (144)
T ss_dssp GGCSEEEECCCS
T ss_pred CCCCEEEECCCC
Confidence 679999998864
No 146
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=62.27 E-value=24 Score=29.57 Aligned_cols=83 Identities=18% Similarity=0.181 Sum_probs=51.4
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHH
Q 023401 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147 (282)
Q Consensus 68 ~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~ 147 (282)
-+-||+-++|.+|. ++.-|. .+|..|.+.|++|.++..+..+ .++....+.|+....+.. +.
T Consensus 17 ~~~~m~mmkI~IIG--~G~mG~-----~la~~l~~~g~~V~~v~~r~~~-------~~~~l~~~~g~~~~~~~~----~~ 78 (220)
T 4huj_A 17 NLYFQSMTTYAIIG--AGAIGS-----ALAERFTAAQIPAIIANSRGPA-------SLSSVTDRFGASVKAVEL----KD 78 (220)
T ss_dssp CTTGGGSCCEEEEE--CHHHHH-----HHHHHHHHTTCCEEEECTTCGG-------GGHHHHHHHTTTEEECCH----HH
T ss_pred chhhhcCCEEEEEC--CCHHHH-----HHHHHHHhCCCEEEEEECCCHH-------HHHHHHHHhCCCcccChH----HH
Confidence 45567778899997 444444 5677888889999886655442 122222334766654321 23
Q ss_pred hhccCEEEEechhchHHHHHHhh
Q 023401 148 ALKADLIVLNTAVAGKWLDAVLK 170 (282)
Q Consensus 148 a~~~DLVIaNT~v~g~wl~~l~~ 170 (282)
+.++|+||..+- ...+.++++
T Consensus 79 ~~~aDvVilavp--~~~~~~v~~ 99 (220)
T 4huj_A 79 ALQADVVILAVP--YDSIADIVT 99 (220)
T ss_dssp HTTSSEEEEESC--GGGHHHHHT
T ss_pred HhcCCEEEEeCC--hHHHHHHHH
Confidence 577999999875 444555553
No 147
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=62.12 E-value=10 Score=33.22 Aligned_cols=43 Identities=12% Similarity=0.106 Sum_probs=28.8
Q ss_pred ccEEEEEeccC----CCCCch-----HHHHHHHHHHHhCCCeEEEEeccCCC
Q 023401 74 SKLVLLVSHEL----SLSGGP-----LLLMELAFLLRGVGTKVNWITIQKPS 116 (282)
Q Consensus 74 ~KkILLISHEL----s~TGAP-----LlLleLA~~Lkq~G~~V~vL~~~~G~ 116 (282)
.||||+|--+. .-+|-| .=+..-...|++.|++|.+.+.+++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~~ 54 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGF 54 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSCC
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 46777764332 223444 45666668999999999999966543
No 148
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=62.09 E-value=22 Score=32.74 Aligned_cols=81 Identities=15% Similarity=0.128 Sum_probs=56.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (282)
.+|++++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+.++|+.+.....-.++.
T Consensus 146 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 218 (452)
T 3oc4_A 146 NSQTVAVI-------GAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET 218 (452)
T ss_dssp TCSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEEC
T ss_pred cCCEEEEE-------CCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc
Confidence 46788887 55567889999999999999998844321 355666778888888899887642222221
Q ss_pred -------H---hhccCEEEEechh
Q 023401 147 -------T---ALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~---a~~~DLVIaNT~v 160 (282)
+ ...+|.||.-|-.
T Consensus 219 ~~~v~v~~~~g~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 219 ANGIVLETSEQEISCDSGIFALNL 242 (452)
T ss_dssp SSCEEEEESSCEEEESEEEECSCC
T ss_pred CCeEEEEECCCEEEeCEEEECcCC
Confidence 0 2358888887654
No 149
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=62.05 E-value=15 Score=32.46 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchh-HHH----HhhccCEEEEechhc
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE-TIN----TALKADLIVLNTAVA 161 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~-~i~----~a~~~DLVIaNT~v~ 161 (282)
.=..+|+.|.+.|++|.++.+..... . ..|+.+.+-...+ .+. ....+|.+|.|.+++
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~~l~---~---------~~g~~~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPVSLP---T---------PPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCCCC---C---------CTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred HHHHHHHHHHHCCCEEEEEECCcccc---c---------CCCCeEEccCcHHHHHHHHHHhcCCCCEEEECCccc
Confidence 55688999999999999987432110 0 1133444332222 222 356799999998876
No 150
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=61.99 E-value=40 Score=30.55 Aligned_cols=91 Identities=20% Similarity=0.235 Sum_probs=56.5
Q ss_pred cccc--ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH----HcCCcee-ehh
Q 023401 68 PLSF--MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW----DRGVQVI-SAK 140 (282)
Q Consensus 68 ~~~f--~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll----~rgI~v~-~~k 140 (282)
+++| -+++.|.+++. +.+|---++..||..|.+.|..|.++...-- .......|. .+. +.|++++ ...
T Consensus 97 ~l~~~~~~~~vI~ivG~--~G~GKTT~~~~LA~~l~~~g~kVllid~D~~--r~~a~~ql~-~~~~~~~~~~l~vip~~~ 171 (320)
T 1zu4_A 97 RIDFKENRLNIFMLVGV--NGTGKTTSLAKMANYYAELGYKVLIAAADTF--RAGATQQLE-EWIKTRLNNKVDLVKANK 171 (320)
T ss_dssp CCCCCTTSCEEEEEESS--TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS--CHHHHHHHH-HHHTTTSCTTEEEECCSS
T ss_pred CccccCCCCeEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc--chhHHHHHH-HHHhccccCCceEEeCCC
Confidence 4555 24566777763 9999999999999999999999988863211 111111121 222 4577777 221
Q ss_pred --------chhHHH--HhhccCEEEEechhchH
Q 023401 141 --------GQETIN--TALKADLIVLNTAVAGK 163 (282)
Q Consensus 141 --------~~~~i~--~a~~~DLVIaNT~v~g~ 163 (282)
..+.+. ...++|+||.-|.-...
T Consensus 172 ~~~~p~~~~~~~l~~~~~~~yD~VIIDTpg~l~ 204 (320)
T 1zu4_A 172 LNADPASVVFDAIKKAKEQNYDLLLIDTAGRLQ 204 (320)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSEEEEECCCCGG
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCCCccc
Confidence 112222 24679999999886544
No 151
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=61.96 E-value=21 Score=33.00 Aligned_cols=59 Identities=19% Similarity=0.301 Sum_probs=44.5
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+-..-+|+|..|.+.|.+|.++..... ..+.++...+.+.+.++||++...
T Consensus 187 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~ 248 (478)
T 3dk9_A 187 PGRSVIV-------GAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKF 248 (478)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETT
T ss_pred CccEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 5788888 4555678999999999999999974321 235566667788888889988754
No 152
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=61.84 E-value=22 Score=32.54 Aligned_cols=76 Identities=13% Similarity=0.147 Sum_probs=46.8
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhc---hhHHH-
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKG---QETIN- 146 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~---~~~i~- 146 (282)
.||+|+ |.|=+...-.+.|.+.|++|+.+..+-.. ......+++.+..++.||+++.-.. .+.++
T Consensus 3 mrivf~-------Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~ 75 (314)
T 3tqq_A 3 LKIVFA-------GTPQFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDEVEQEK 75 (314)
T ss_dssp CEEEEE-------ECSGGGHHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSHHHHHH
T ss_pred cEEEEE-------CCCHHHHHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCHHHHHH
Confidence 456665 55555666667777889999888764211 0111234667888889999985422 22222
Q ss_pred -HhhccCEEEEe
Q 023401 147 -TALKADLIVLN 157 (282)
Q Consensus 147 -~a~~~DLVIaN 157 (282)
...++|+||+-
T Consensus 76 l~~~~~Dliv~~ 87 (314)
T 3tqq_A 76 LIAMNADVMVVV 87 (314)
T ss_dssp HHTTCCSEEEEE
T ss_pred HHhcCCCEEEEc
Confidence 36779999974
No 153
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.75 E-value=16 Score=33.85 Aligned_cols=59 Identities=17% Similarity=0.331 Sum_probs=43.5
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++||.+...
T Consensus 171 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 232 (458)
T 1lvl_A 171 PQHLVVV-------GGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLG 232 (458)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETT
T ss_pred CCeEEEE-------CcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEEC
Confidence 5778887 45557889999999999999988744321 24455566777888889888754
No 154
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=61.73 E-value=32 Score=29.19 Aligned_cols=83 Identities=20% Similarity=0.183 Sum_probs=46.9
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCC----cee--ehh
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV----QVI--SAK 140 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI----~v~--~~k 140 (282)
.+..-+++|++|+.. -+|+ +=.++++.|.+.|++|.++... .+ . ...+.+++...|. ..+ +-.
T Consensus 25 ~~m~~l~~k~vlVTG----asgg--IG~~la~~l~~~G~~V~~~~r~-~~---~-~~~~~~~~~~~~~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 25 PGMERWRDRLALVTG----ASGG--IGAAVARALVQQGLKVVGCART-VG---N-IEELAAECKSAGYPGTLIPYRCDLS 93 (279)
T ss_dssp TTCGGGTTCEEEEES----TTSH--HHHHHHHHHHHTTCEEEEEESC-HH---H-HHHHHHHHHHTTCSSEEEEEECCTT
T ss_pred ccccccCCCEEEEEC----CCch--HHHHHHHHHHHCCCEEEEEECC-hH---H-HHHHHHHHHhcCCCceEEEEEecCC
Confidence 344557888777653 2332 5578899999999998877632 21 1 1223445554442 122 112
Q ss_pred chhHHH--------HhhccCEEEEechh
Q 023401 141 GQETIN--------TALKADLIVLNTAV 160 (282)
Q Consensus 141 ~~~~i~--------~a~~~DLVIaNT~v 160 (282)
...+++ ....+|.||.|..+
T Consensus 94 ~~~~v~~~~~~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 94 NEEDILSMFSAIRSQHSGVDICINNAGL 121 (279)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 223332 12369999988764
No 155
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=61.70 E-value=21 Score=33.23 Aligned_cols=59 Identities=19% Similarity=0.266 Sum_probs=44.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.|++++| |+-..-+|+|..|++.|.+|.++.... +..+.++...+.+.+.++||++...
T Consensus 185 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~ 245 (488)
T 3dgz_A 185 PGKTLVV-------GASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKG 245 (488)
T ss_dssp CCSEEEE-------CCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeC
Confidence 4567777 566678899999999999999997432 1134566677888888899998754
No 156
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=61.61 E-value=31 Score=30.32 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=44.7
Q ss_pred CchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--h-h--c----hhHH-H--HhhccCE
Q 023401 88 GGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--A-K--G----QETI-N--TALKADL 153 (282)
Q Consensus 88 GAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~-k--~----~~~i-~--~a~~~DL 153 (282)
|.|-.+..+...|.+. +++++.+..++++. +..+...+.|||++. . + . .+++ + ...++|+
T Consensus 31 G~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dl 104 (229)
T 3auf_A 31 GSGTNLQAILDGCREGRIPGRVAVVISDRADA------YGLERARRAGVDALHMDPAAYPSRTAFDAALAERLQAYGVDL 104 (229)
T ss_dssp SCCHHHHHHHHHHHTTSSSEEEEEEEESSTTC------HHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHHTTCSE
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEcCCCch------HHHHHHHHcCCCEEEECcccccchhhccHHHHHHHHhcCCCE
Confidence 4455788888888876 57877777554421 335677888999973 2 1 1 1222 2 3567999
Q ss_pred EEEec---hhchHHHH
Q 023401 154 IVLNT---AVAGKWLD 166 (282)
Q Consensus 154 VIaNT---~v~g~wl~ 166 (282)
||+-. ++....++
T Consensus 105 iv~agy~~IL~~~~l~ 120 (229)
T 3auf_A 105 VCLAGYMRLVRGPMLT 120 (229)
T ss_dssp EEESSCCSCCCHHHHH
T ss_pred EEEcChhHhCCHHHHh
Confidence 98742 33344444
No 157
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=61.49 E-value=21 Score=33.26 Aligned_cols=59 Identities=19% Similarity=0.331 Sum_probs=44.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++..... ..+.++...+.+.+.++||++...
T Consensus 185 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~ 246 (479)
T 2hqm_A 185 PKKVVVV-------GAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKL 246 (479)
T ss_dssp CSEEEEE-------CSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeC
Confidence 5788888 4445679999999999999999884422 134566667788888889988754
No 158
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=61.43 E-value=68 Score=27.11 Aligned_cols=89 Identities=10% Similarity=-0.024 Sum_probs=50.7
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
++++|-+|..+++..=-.-++-.+-..+++.|+++.+......+ +- +.+. .+.+ ...++|
T Consensus 2 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~---~~----~~~~------------i~~~-~~~~vd 61 (330)
T 3uug_A 2 DKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDI---PN----QLSQ------------IENM-VTKGVK 61 (330)
T ss_dssp CCCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCH---HH----HHHH------------HHHH-HHHTCS
T ss_pred CCcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCH---HH----HHHH------------HHHH-HHcCCC
Confidence 56778888877765433334555667788888888777633221 11 0011 1111 246788
Q ss_pred EEEEechh---chHHHHHHhhccCCCCCCceEEEeee
Q 023401 153 LIVLNTAV---AGKWLDAVLKEDVPRVLPNVLWWIHE 186 (282)
Q Consensus 153 LVIaNT~v---~g~wl~~l~~~~~~~~~~pVIWWIHE 186 (282)
.||+...- ....++.+.+.++ |||..=.+
T Consensus 62 giIi~~~~~~~~~~~~~~~~~~gi-----PvV~~~~~ 93 (330)
T 3uug_A 62 VLVIASIDGTTLSDVLKQAGEQGI-----KVIAYDRL 93 (330)
T ss_dssp EEEECCSSGGGGHHHHHHHHHTTC-----EEEEESSC
T ss_pred EEEEEcCCchhHHHHHHHHHHCCC-----CEEEECCC
Confidence 88887654 3445666665555 66665443
No 159
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=61.40 E-value=69 Score=28.40 Aligned_cols=89 Identities=22% Similarity=0.220 Sum_probs=56.6
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh---c--
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---G-- 141 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k---~-- 141 (282)
++++|-+++.|.+++ -+.+|---++..||..+.+.|..|.++...-. .......+.......|++++... .
T Consensus 91 ~~i~~~~~~~i~i~g--~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~--~~~~~~ql~~~~~~~~l~~~~~~~~~~p~ 166 (295)
T 1ls1_A 91 RLPVLKDRNLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ--RPAAREQLRLLGEKVGVPVLEVMDGESPE 166 (295)
T ss_dssp CCCCCCSSEEEEEEC--CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSS--CHHHHHHHHHHHHHHTCCEEECCTTCCHH
T ss_pred ceeecCCCeEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEecCCcc--cHhHHHHHHHhcccCCeEEEEcCCCCCHH
Confidence 344554667666665 48899999999999999999999988773211 11111112222233488888531 1
Q ss_pred ---hhHHHHh--hccCEEEEech
Q 023401 142 ---QETINTA--LKADLIVLNTA 159 (282)
Q Consensus 142 ---~~~i~~a--~~~DLVIaNT~ 159 (282)
...+..+ .++|+||.-|.
T Consensus 167 ~l~~~~l~~~~~~~~D~viiDtp 189 (295)
T 1ls1_A 167 SIRRRVEEKARLEARDLILVDTA 189 (295)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHhCCCCEEEEeCC
Confidence 1234333 68999999998
No 160
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=61.38 E-value=64 Score=26.28 Aligned_cols=18 Identities=17% Similarity=0.089 Sum_probs=8.9
Q ss_pred ccCEEEEechhchHHHHH
Q 023401 150 KADLIVLNTAVAGKWLDA 167 (282)
Q Consensus 150 ~~DLVIaNT~v~g~wl~~ 167 (282)
.++.|..|-.-++...-+
T Consensus 96 ~~~~V~~d~~~~~~~a~~ 113 (272)
T 3o74_A 96 HFCSVISDDRDASRQLAA 113 (272)
T ss_dssp TCEEEEECHHHHHHHHHH
T ss_pred ccCEEEEchHHHHHHHHH
Confidence 355555555555544433
No 161
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=61.21 E-value=27 Score=29.91 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=46.0
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchh
Q 023401 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQE 143 (282)
Q Consensus 68 ~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~ 143 (282)
+...+++|+||+.. -+|+ +=.++|+.|.+.|++|.++. +..+ .. ..+.+++.+.|..+. +-...+
T Consensus 38 ~~~~l~~k~vlITG----asgg--IG~~la~~L~~~G~~V~~~~-r~~~---~~-~~~~~~l~~~~~~~~~~~~Dl~d~~ 106 (285)
T 2c07_A 38 YYYCGENKVALVTG----AGRG--IGREIAKMLAKSVSHVICIS-RTQK---SC-DSVVDEIKSFGYESSGYAGDVSKKE 106 (285)
T ss_dssp CCCCCSSCEEEEES----TTSH--HHHHHHHHHTTTSSEEEEEE-SSHH---HH-HHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred ccccCCCCEEEEEC----CCcH--HHHHHHHHHHHcCCEEEEEc-CCHH---HH-HHHHHHHHhcCCceeEEECCCCCHH
Confidence 44557788776653 2332 55688899999999988844 3221 11 123344444343322 112233
Q ss_pred HHHH--------hhccCEEEEechhc
Q 023401 144 TINT--------ALKADLIVLNTAVA 161 (282)
Q Consensus 144 ~i~~--------a~~~DLVIaNT~v~ 161 (282)
+++. ...+|.||.|..+.
T Consensus 107 ~v~~~~~~~~~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 107 EISEVINKILTEHKNVDILVNNAGIT 132 (285)
T ss_dssp HHHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3331 24689999998653
No 162
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=61.19 E-value=6.1 Score=34.64 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=30.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
-|.++.||||++.= ..|==.=++.||+.|++.|++|.+++.
T Consensus 18 ~~~~~MRIL~~~~p--~~GHv~P~l~LA~~L~~rGh~Vt~~t~ 58 (400)
T 4amg_A 18 LYFQSMRALFITSP--GLSHILPTVPLAQALRALGHEVRYATG 58 (400)
T ss_dssp ---CCCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCeEEEECCC--chhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 35677899999743 335556688999999999999999984
No 163
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=61.12 E-value=9.5 Score=35.61 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=31.6
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
+-++||++|+| .|.=.||+ -|.+.++.|++.|...+....
T Consensus 209 g~v~gk~viIV-DDii~TG~--Tl~~a~~~L~~~Ga~~v~~~~ 248 (326)
T 3s5j_B 209 GDVKDRVAILV-DDMADTCG--TICHAADKLLSAGATRVYAIL 248 (326)
T ss_dssp SCCTTSEEEEE-EEEESSCH--HHHHHHHHHHHTTCSEEEEEE
T ss_pred ccCCCCEEEEE-ccccCCcH--HHHHHHHHHHHcCCCEEEEEE
Confidence 34789988887 67777888 688999999999998655554
No 164
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=61.01 E-value=22 Score=33.63 Aligned_cols=59 Identities=20% Similarity=0.404 Sum_probs=44.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++...... ...++...+.+.+.++|+.+...
T Consensus 214 g~~vvVi-------GgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~ 275 (523)
T 1mo9_A 214 GSTVVVV-------GGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISG 275 (523)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEEC
Confidence 4788887 55567889999999999999988744322 24566667888888889988744
No 165
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=60.09 E-value=72 Score=26.57 Aligned_cols=82 Identities=17% Similarity=0.299 Sum_probs=58.3
Q ss_pred CchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--------HhhccCEEEEech
Q 023401 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN--------TALKADLIVLNTA 159 (282)
Q Consensus 88 GAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~--------~a~~~DLVIaNT~ 159 (282)
..|=.|-|+.+..|..|..|++|-+...+ ..- .--.++|.+.|+.+-.....+-|+ .--..|.|+.-|-
T Consensus 10 sdpeilkeivreikrqgvrvvllysdqde--krr-rerleefekqgvdvrtvedkedfrenireiwerypqldvvvivtt 86 (162)
T 2l82_A 10 SDPEILKEIVREIKRQGVRVVLLYSDQDE--KRR-RERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTT 86 (162)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECCSCH--HHH-HHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCeEEEEEecCchH--HHH-HHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEEec
Confidence 45889999999999999999999854442 111 112356777899887543333222 4567899999888
Q ss_pred hchHHHHHHhhcc
Q 023401 160 VAGKWLDAVLKED 172 (282)
Q Consensus 160 v~g~wl~~l~~~~ 172 (282)
---.|+..++.+.
T Consensus 87 ddkewikdfieea 99 (162)
T 2l82_A 87 DDKEWIKDFIEEA 99 (162)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 8899999887443
No 166
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=59.80 E-value=24 Score=30.04 Aligned_cols=58 Identities=17% Similarity=0.106 Sum_probs=41.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
..+|+|++| |+-..-+|+|..|.+.|.+|.++........+ ..+.+++.++||++...
T Consensus 153 ~~~~~v~vi-------G~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~---~~l~~~l~~~gv~i~~~ 210 (319)
T 3cty_A 153 FKGKRVVTI-------GGGNSGAIAAISMSEYVKNVTIIEYMPKYMCE---NAYVQEIKKRNIPYIMN 210 (319)
T ss_dssp GBTSEEEEE-------CCSHHHHHHHHHHTTTBSEEEEECSSSSCCSC---HHHHHHHHHTTCCEECS
T ss_pred cCCCeEEEE-------CCCHHHHHHHHHHHhhCCcEEEEEcCCccCCC---HHHHHHHhcCCcEEEcC
Confidence 457888888 44446789999999999999998744322111 23577788889988755
No 167
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=59.38 E-value=26 Score=32.27 Aligned_cols=80 Identities=18% Similarity=0.317 Sum_probs=54.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC--CchhhhhhhHHHHHHcCCceeehhchhHH------
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS--EEDEVIYSLEHKMWDRGVQVISAKGQETI------ 145 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~--~~~~v~~~L~~kll~rgI~v~~~k~~~~i------ 145 (282)
+|+|++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+.++|+++........+
T Consensus 176 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 248 (467)
T 1zk7_A 176 PERLAVI-------GSSVVALELAQAFARLGSKVTVLARNTLFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGE 248 (467)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSCTTTTSCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTE
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHHcCCEEEEEEECCccCCCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE
Confidence 5788888 44456789999999999999998743321 34566667888888889988754211111
Q ss_pred ---H---HhhccCEEEEechh
Q 023401 146 ---N---TALKADLIVLNTAV 160 (282)
Q Consensus 146 ---~---~a~~~DLVIaNT~v 160 (282)
. ....+|.||..|-.
T Consensus 249 ~~v~~~~~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 249 FVLTTTHGELRADKLLVATGR 269 (467)
T ss_dssp EEEEETTEEEEESEEEECSCE
T ss_pred EEEEECCcEEEcCEEEECCCC
Confidence 1 12358999887654
No 168
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=59.32 E-value=26 Score=32.31 Aligned_cols=59 Identities=15% Similarity=0.347 Sum_probs=44.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHH-HHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKM-WDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kl-l~rgI~v~~~ 139 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+ .++||++...
T Consensus 174 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~ 236 (468)
T 2qae_A 174 PKTMVVI-------GGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTS 236 (468)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECS
T ss_pred CceEEEE-------CCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeC
Confidence 5788887 55567789999999999999988744321 2445666778888 8889988754
No 169
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=59.01 E-value=51 Score=28.44 Aligned_cols=79 Identities=13% Similarity=0.075 Sum_probs=46.8
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-------cCCceeeh--hc
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-------RGVQVISA--KG 141 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-------rgI~v~~~--k~ 141 (282)
.|++|+||+++ -|| -+=-++++.|.+.|++|..+....... .+. .+.+.+ .++.++.. ..
T Consensus 22 ~~~~~~vlVtG----atG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~Dl~d 90 (351)
T 3ruf_A 22 IFSPKTWLITG----VAG--FIGSNLLEKLLKLNQVVIGLDNFSTGH-QYN----LDEVKTLVSTEQWSRFCFIEGDIRD 90 (351)
T ss_dssp HHSCCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEECCSSCC-HHH----HHHHHHTSCHHHHTTEEEEECCTTC
T ss_pred CCCCCeEEEEC----CCc--HHHHHHHHHHHHCCCEEEEEeCCCCCc-hhh----hhhhhhccccccCCceEEEEccCCC
Confidence 35678887753 233 255688899999999999988543321 111 122322 34554422 23
Q ss_pred hhHHH-HhhccCEEEEechh
Q 023401 142 QETIN-TALKADLIVLNTAV 160 (282)
Q Consensus 142 ~~~i~-~a~~~DLVIaNT~v 160 (282)
..++. .+.++|.||-+...
T Consensus 91 ~~~~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 91 LTTCEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp HHHHHHHTTTCSEEEECCCC
T ss_pred HHHHHHHhcCCCEEEECCcc
Confidence 33443 45589999988764
No 170
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=58.95 E-value=11 Score=29.48 Aligned_cols=74 Identities=20% Similarity=0.147 Sum_probs=43.8
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceeeh--hchhHHHH
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISA--KGQETINT 147 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll-~rgI~v~~~--k~~~~i~~ 147 (282)
...+++|++++ ++..| ..++..|++.|++|.++... +. . .+++. +.|+.++.. .....+..
T Consensus 16 ~~~~~~v~IiG--~G~iG-----~~la~~L~~~g~~V~vid~~-~~---~-----~~~~~~~~g~~~~~~d~~~~~~l~~ 79 (155)
T 2g1u_A 16 KQKSKYIVIFG--CGRLG-----SLIANLASSSGHSVVVVDKN-EY---A-----FHRLNSEFSGFTVVGDAAEFETLKE 79 (155)
T ss_dssp -CCCCEEEEEC--CSHHH-----HHHHHHHHHTTCEEEEEESC-GG---G-----GGGSCTTCCSEEEESCTTSHHHHHT
T ss_pred ccCCCcEEEEC--CCHHH-----HHHHHHHHhCCCeEEEEECC-HH---H-----HHHHHhcCCCcEEEecCCCHHHHHH
Confidence 44578899986 23333 45788899999998877632 21 1 12333 456665532 12223332
Q ss_pred --hhccCEEEEechh
Q 023401 148 --ALKADLIVLNTAV 160 (282)
Q Consensus 148 --a~~~DLVIaNT~v 160 (282)
..++|+||..|-.
T Consensus 80 ~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 80 CGMEKADMVFAFTND 94 (155)
T ss_dssp TTGGGCSEEEECSSC
T ss_pred cCcccCCEEEEEeCC
Confidence 4679999998764
No 171
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=58.89 E-value=8.7 Score=35.68 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=29.9
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
-++||++|+| .|.=.||+ -|.+.++.|++.|...+....
T Consensus 213 ~v~gk~viiV-DDii~TG~--Tl~~a~~~L~~~Ga~~v~~~~ 251 (319)
T 3dah_A 213 EVEGRTCVIM-DDMVDTAG--TLCKAAQVLKERGAKQVFAYA 251 (319)
T ss_dssp --CCSEEEEE-EEEESSCH--HHHHHHHHHHHTTCSCEEEEE
T ss_pred cCCCCEEEEE-ecccCchH--HHHHHHHHHHHcCCCEEEEEE
Confidence 3789988877 77888888 578999999999987555544
No 172
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=58.68 E-value=26 Score=32.18 Aligned_cols=81 Identities=19% Similarity=0.304 Sum_probs=54.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhH------
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQET------ 144 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~~------ 144 (282)
+|+|++| |+-..-+|+|..|++.|.+|.++..... ....++...+.+.+.++|+.+.....-..
T Consensus 167 ~~~vvIi-------GgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~ 239 (455)
T 2yqu_A 167 PKRLIVV-------GGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK 239 (455)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC
Confidence 5777777 4556788999999999999998874322 13455666778888888998875421111
Q ss_pred ---HH----HhhccCEEEEechhc
Q 023401 145 ---IN----TALKADLIVLNTAVA 161 (282)
Q Consensus 145 ---i~----~a~~~DLVIaNT~v~ 161 (282)
+. ....+|.||..|-..
T Consensus 240 ~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 240 GARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp EEEEEETTSCEEEESEEEECSCEE
T ss_pred EEEEEECCCeEEEcCEEEECcCCC
Confidence 11 123589999877653
No 173
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.36 E-value=17 Score=33.43 Aligned_cols=59 Identities=12% Similarity=0.273 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++||++...
T Consensus 177 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 238 (470)
T 1dxl_A 177 PKKLVVI-------GAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLK 238 (470)
T ss_dssp CSEEEES-------CCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeC
Confidence 5677776 45457789999999999999988744321 34566667788888889988754
No 174
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=57.91 E-value=24 Score=29.79 Aligned_cols=57 Identities=26% Similarity=0.341 Sum_probs=40.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA 139 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~ 139 (282)
.+|+|++| |+-..-+|+|..|.+.|.+|.++........+ ..+.+++.+ .||++...
T Consensus 143 ~~~~v~Vv-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---~~~~~~l~~~~gv~v~~~ 200 (310)
T 1fl2_A 143 KGKRVAVI-------GGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD---QVLQDKLRSLKNVDIILN 200 (310)
T ss_dssp BTCEEEEE-------CCSHHHHHHHHHHHTTBSEEEEECSSSSCCSC---HHHHHHHHTCTTEEEESS
T ss_pred CCCEEEEE-------CCCHHHHHHHHHHHHhCCEEEEEEeCcccCcc---HHHHHHHhhCCCeEEecC
Confidence 57888888 55567899999999999999998743322111 235666776 58887654
No 175
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=57.68 E-value=22 Score=30.49 Aligned_cols=57 Identities=12% Similarity=0.198 Sum_probs=42.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.++|++++| .|++...+++|..+++.|.+|.++..... +...+.+++.++|+++...
T Consensus 144 ~~~~~~~VI------ggG~~~~~e~a~~~~~~~~~v~i~~~~~~-----~~~~~~~~l~~~g~~~~~~ 200 (304)
T 4fk1_A 144 LKDQPLIII------SENEDHTLHMTKLVYNWSTDLVIATNGNE-----LSQTIMDELSNKNIPVITE 200 (304)
T ss_dssp GTTSCEEEE------CCSHHHHHHHHHHHTTTCSCEEEECSSCC-----CCHHHHHHHHTTTCCEECS
T ss_pred hcCCceeee------cCCCchhhhHHHHHHhCCceEEEEecccc-----chhhhhhhhhccceeEeee
Confidence 466777777 47888899999999999999987763322 2234577788888887754
No 176
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=57.52 E-value=35 Score=29.16 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=44.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhchhHHH---
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKGQETIN--- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k~~~~i~--- 146 (282)
++||++|+.. |+-=+=.++|+.|.+.|++|.++..... .+.+.+.+.++..+. -....+++
T Consensus 25 l~~k~vlVTG------as~gIG~aia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (260)
T 3gem_A 25 LSSAPILITG------ASQRVGLHCALRLLEHGHRVIISYRTEH--------ASVTELRQAGAVALYGDFSCETGIMAFI 90 (260)
T ss_dssp --CCCEEESS------TTSHHHHHHHHHHHHTTCCEEEEESSCC--------HHHHHHHHHTCEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEeCChH--------HHHHHHHhcCCeEEECCCCCHHHHHHHH
Confidence 5677666532 2223567899999999999887764432 234555555655442 12222232
Q ss_pred -----HhhccCEEEEechhc
Q 023401 147 -----TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -----~a~~~DLVIaNT~v~ 161 (282)
.....|.+|.|..+.
T Consensus 91 ~~~~~~~g~iD~lv~nAg~~ 110 (260)
T 3gem_A 91 DLLKTQTSSLRAVVHNASEW 110 (260)
T ss_dssp HHHHHHCSCCSEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCCcc
Confidence 124689999987653
No 177
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=57.52 E-value=22 Score=33.03 Aligned_cols=59 Identities=20% Similarity=0.352 Sum_probs=44.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+-..-+|+|..|.+.|.+|.++..... ....++...+.+.+.++||++...
T Consensus 198 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~ 259 (491)
T 3urh_A 198 PASMIVV-------GGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLG 259 (491)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEEC
Confidence 6778887 4455678999999999999998863322 135566667788888889988754
No 178
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=57.43 E-value=16 Score=33.48 Aligned_cols=81 Identities=26% Similarity=0.326 Sum_probs=52.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (282)
++|++++| |+-..-+|+|..|++.|.+|.++...... .+.++...+++.+.++ +.+........+.
T Consensus 147 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~ 218 (449)
T 3kd9_A 147 KVENVVII-------GGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGE 218 (449)
T ss_dssp CCCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECS
T ss_pred CCCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEecc
Confidence 57899998 44456789999999999999998743321 3445555666666666 7765432111110
Q ss_pred ----------HhhccCEEEEechhc
Q 023401 147 ----------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 ----------~a~~~DLVIaNT~v~ 161 (282)
....+|.||.-|-..
T Consensus 219 ~~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 219 ERVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp SSCCEEEETTEEEECSEEEECSCEE
T ss_pred CcEEEEEeCCCEEECCEEEEeeCCc
Confidence 124589999877553
No 179
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=57.31 E-value=40 Score=29.17 Aligned_cols=85 Identities=18% Similarity=0.117 Sum_probs=46.5
Q ss_pred cCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-hc
Q 023401 64 TKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-KG 141 (282)
Q Consensus 64 ~~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~-~-k~ 141 (282)
..+++...+++|+||+.. -|| -+=-++++.|.+.|++|.++...... ..+.. +.+ .++..+. | ..
T Consensus 10 ~~~~~~~~~~~~~vlVTG----asG--~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~l--~~v~~~~~Dl~d 76 (330)
T 2pzm_A 10 HSSGLVPRGSHMRILITG----GAG--CLGSNLIEHWLPQGHEILVIDNFATG-KREVL----PPV--AGLSVIEGSVTD 76 (330)
T ss_dssp ----CCSTTTCCEEEEET----TTS--HHHHHHHHHHGGGTCEEEEEECCSSS-CGGGS----CSC--TTEEEEECCTTC
T ss_pred cccCCcccCCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEECCCcc-chhhh----hcc--CCceEEEeeCCC
Confidence 335667778889877652 222 35568889999999999988753221 11110 111 2333331 1 22
Q ss_pred hhHHH-Hhh--ccCEEEEechhc
Q 023401 142 QETIN-TAL--KADLIVLNTAVA 161 (282)
Q Consensus 142 ~~~i~-~a~--~~DLVIaNT~v~ 161 (282)
..++. ... .+|.||-|....
T Consensus 77 ~~~~~~~~~~~~~D~vih~A~~~ 99 (330)
T 2pzm_A 77 AGLLERAFDSFKPTHVVHSAAAY 99 (330)
T ss_dssp HHHHHHHHHHHCCSEEEECCCCC
T ss_pred HHHHHHHHhhcCCCEEEECCccC
Confidence 33343 233 799999887643
No 180
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=57.25 E-value=82 Score=26.41 Aligned_cols=79 Identities=22% Similarity=0.276 Sum_probs=43.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~--~~k~~~~i~- 146 (282)
|++|+||+.. -+|+ +=.++++.|.+.|++|.++...... .. .+.+++...+..+ + +-....+++
T Consensus 32 l~~k~vlITG----asgg--IG~~la~~L~~~G~~V~~~~r~~~~-~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 100 (279)
T 3ctm_A 32 LKGKVASVTG----SSGG--IGWAVAEAYAQAGADVAIWYNSHPA-DE----KAEHLQKTYGVHSKAYKCNISDPKSVEE 100 (279)
T ss_dssp CTTCEEEETT----TTSS--HHHHHHHHHHHHTCEEEEEESSSCC-HH----HHHHHHHHHCSCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCcH--HHHHHHHHHHHCCCEEEEEeCCHHH-HH----HHHHHHHhcCCcceEEEeecCCHHHHHH
Confidence 6788766542 2333 5568888898999998887744321 11 1233343334332 2 112222232
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
....+|.||.|..+.
T Consensus 101 ~~~~~~~~~g~id~li~~Ag~~ 122 (279)
T 3ctm_A 101 TISQQEKDFGTIDVFVANAGVT 122 (279)
T ss_dssp HHHHHHHHHSCCSEEEECGGGS
T ss_pred HHHHHHHHhCCCCEEEECCccc
Confidence 123599999988754
No 181
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=57.22 E-value=7.7 Score=36.26 Aligned_cols=72 Identities=19% Similarity=0.264 Sum_probs=45.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
++|+|++|. ++.+| |..|++|.+.|++|...=.+..+. + ...+. .|+++....... +....+|
T Consensus 4 ~~~~v~viG--~G~~G-----~~~a~~l~~~G~~v~~~D~~~~~~-~------~~~l~-~G~~~~~g~~~~--~~~~~~d 66 (439)
T 2x5o_A 4 QGKNVVIIG--LGLTG-----LSCVDFFLARGVTPRVMDTRMTPP-G------LDKLP-EAVERHTGSLND--EWLMAAD 66 (439)
T ss_dssp TTCCEEEEC--CHHHH-----HHHHHHHHTTTCCCEEEESSSSCT-T------GGGSC-TTSCEEESSCCH--HHHHTCS
T ss_pred CCCEEEEEe--ecHHH-----HHHHHHHHhCCCEEEEEECCCCcc-h------hHHhh-CCCEEEECCCcH--HHhccCC
Confidence 678898886 33333 556899999999998755433321 1 12344 799887443211 1223799
Q ss_pred EEEEechhc
Q 023401 153 LIVLNTAVA 161 (282)
Q Consensus 153 LVIaNT~v~ 161 (282)
+||+.+.+.
T Consensus 67 ~vV~s~gi~ 75 (439)
T 2x5o_A 67 LIVASPGIA 75 (439)
T ss_dssp EEEECTTSC
T ss_pred EEEeCCCCC
Confidence 999998763
No 182
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=56.99 E-value=19 Score=30.01 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=44.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN 146 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~ 146 (282)
-+++|+||+.. -+|+ +=.++++.|.+.|++|.++.....+ . ...+.+++.+.|..+. +-.....++
T Consensus 18 ~~~~k~vlItG----asgg--iG~~la~~l~~~G~~v~~~~r~~~~---~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 87 (274)
T 1ja9_A 18 PLAGKVALTTG----AGRG--IGRGIAIELGRRGASVVVNYGSSSK---A-AEEVVAELKKLGAQGVAIQADISKPSEVV 87 (274)
T ss_dssp TTTTCEEEETT----TTSH--HHHHHHHHHHHTTCEEEEEESSCHH---H-HHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCCCEEEEeC----CCch--HHHHHHHHHHHCCCEEEEEcCCchH---H-HHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 36788776542 2332 5578899999999998887642221 1 1123344444443322 112222332
Q ss_pred --------HhhccCEEEEechh
Q 023401 147 --------TALKADLIVLNTAV 160 (282)
Q Consensus 147 --------~a~~~DLVIaNT~v 160 (282)
....+|.||.|..+
T Consensus 88 ~~~~~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 88 ALFDKAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHHHHHSCEEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 12368999988764
No 183
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=56.92 E-value=33 Score=29.78 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=28.7
Q ss_pred ccccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 61 RIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 61 ~~~~~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+.+....+..-++||++|+.. -+|+.=+=.++|+.|.+.|+.|.++...
T Consensus 17 ~gp~sm~~~~~l~~k~vlVTG----asg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 17 QGPGSMRTGMLMEGKKGVIIG----VANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp ----CCCCCCTTTTCEEEEEC----CCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCccccchhccCCCEEEEEe----CCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 333333444557888777654 1211124568899999999998776643
No 184
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=56.50 E-value=68 Score=26.47 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=25.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+++|+||+.. -+|+ +=.++++.|.+.|++|.++...
T Consensus 10 ~~~k~vlVTG----asgg--iG~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 10 VKGLVAVITG----GASG--LGLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEEC----CCCh--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5788776653 2232 5578999999999998887744
No 185
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=56.48 E-value=83 Score=25.96 Aligned_cols=39 Identities=3% Similarity=-0.257 Sum_probs=18.7
Q ss_pred cccEEEEEeccC-CCCCchHHHHHHHHHHHhC-CCeEEEEe
Q 023401 73 KSKLVLLVSHEL-SLSGGPLLLMELAFLLRGV-GTKVNWIT 111 (282)
Q Consensus 73 ~~KkILLISHEL-s~TGAPLlLleLA~~Lkq~-G~~V~vL~ 111 (282)
++++|-+|.++. +..--.-++-.+-..+++. |+.+.+..
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~ 47 (304)
T 3gbv_A 7 KKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANI 47 (304)
T ss_dssp CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEE
T ss_pred CcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 345565565555 3332222333444555555 56555544
No 186
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=56.44 E-value=89 Score=26.24 Aligned_cols=88 Identities=16% Similarity=0.181 Sum_probs=48.2
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCc-------hhhhhhhHHHHHHcCCcee---
Q 023401 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE-------DEVIYSLEHKMWDRGVQVI--- 137 (282)
Q Consensus 68 ~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~-------~~v~~~L~~kll~rgI~v~--- 137 (282)
+..-++||++|+.. |+-=+=.++|+.|.+.|++|+++........ .+-...+..++...|..+.
T Consensus 4 ~m~~l~gk~vlVTG------as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (287)
T 3pxx_A 4 SMGRVQDKVVLVTG------GARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAE 77 (287)
T ss_dssp SCCTTTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred cccccCCCEEEEeC------CCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEE
Confidence 34457788776643 2223557899999999999988764322111 1111223334444444333
Q ss_pred -ehhchhHHH--------HhhccCEEEEechhc
Q 023401 138 -SAKGQETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 138 -~~k~~~~i~--------~a~~~DLVIaNT~v~ 161 (282)
+-....+++ ....+|.+|.|..+.
T Consensus 78 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 78 VDVRDRAAVSRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 112222222 224799999998764
No 187
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=56.33 E-value=27 Score=29.89 Aligned_cols=57 Identities=18% Similarity=0.205 Sum_probs=40.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA 139 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~ 139 (282)
.+|+|++| |+-..-+|+|..|.+.|.+|.++........ ...+.+++++ +||++...
T Consensus 151 ~~~~v~Vv-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~~l~~~~gv~i~~~ 208 (325)
T 2q7v_A 151 KGKKVVVI-------GGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVAQARAFANPKMKFIWD 208 (325)
T ss_dssp TTCEEEEE-------CCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHHHHHHHTCTTEEEECS
T ss_pred CCCEEEEE-------CCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHHHHHHHhcCCceEecC
Confidence 57888888 5556788999999999999999985432211 1234566765 48887754
No 188
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=56.26 E-value=19 Score=33.57 Aligned_cols=59 Identities=10% Similarity=0.283 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|++++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++||.+...
T Consensus 185 ~~~vvVi-------GgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~ 246 (482)
T 1ojt_A 185 PGKLLII-------GGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVN 246 (482)
T ss_dssp CSEEEEE-------SCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEEC
Confidence 5777777 5556789999999999999999874422 134556667778888888887754
No 189
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=56.21 E-value=44 Score=28.34 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=45.7
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHH
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETIN 146 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~--~~k~~~~i~ 146 (282)
.+++|+||+.. -+|+ +=.++|+.|.+.|++|.++... .+ . ...+.+++.+.|.++ + +-....+++
T Consensus 28 ~l~~k~vlITG----asgg--IG~~la~~L~~~G~~V~~~~r~-~~---~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~ 96 (272)
T 1yb1_A 28 SVTGEIVLITG----AGHG--IGRLTAYEFAKLKSKLVLWDIN-KH---G-LEETAAKCKGLGAKVHTFVVDCSNREDIY 96 (272)
T ss_dssp CCTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESC-HH---H-HHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred ccCCCEEEEEC----CCch--HHHHHHHHHHHCCCEEEEEEcC-HH---H-HHHHHHHHHhcCCeEEEEEeeCCCHHHHH
Confidence 46788777653 2333 5578999999999998877632 21 1 122344555444332 2 112222232
Q ss_pred --------HhhccCEEEEechhc
Q 023401 147 --------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 --------~a~~~DLVIaNT~v~ 161 (282)
....+|.||.|..+.
T Consensus 97 ~~~~~~~~~~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 97 SSAKKVKAEIGDVSILVNNAGVV 119 (272)
T ss_dssp HHHHHHHHHTCCCSEEEECCCCC
T ss_pred HHHHHHHHHCCCCcEEEECCCcC
Confidence 123689999998653
No 190
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=56.17 E-value=24 Score=29.48 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=41.8
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeeh
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISA 139 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-gI~v~~~ 139 (282)
.+.++|+|++| |+-..-+|+|..|.+.|.+|.++........++ .+.++++++ ||.+...
T Consensus 150 ~~~~~~~v~vv-------G~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~---~~~~~~~~~~gv~~~~~ 210 (323)
T 3f8d_A 150 PLFKNRVVAVI-------GGGDSALEGAEILSSYSTKVYLIHRRDTFKAQP---IYVETVKKKPNVEFVLN 210 (323)
T ss_dssp GGGTTCEEEEE-------CCSHHHHHHHHHHHHHSSEEEEECSSSSCCSCH---HHHHHHHTCTTEEEECS
T ss_pred hHcCCCEEEEE-------CCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcCH---HHHHHHHhCCCcEEEeC
Confidence 34578889988 555577899999999999999988543322211 245666665 8887754
No 191
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=56.16 E-value=33 Score=26.42 Aligned_cols=70 Identities=19% Similarity=0.179 Sum_probs=46.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHH--hhc
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT--ALK 150 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~~--a~~ 150 (282)
++|++++- ++.| ..+|+.|++.|++|.++-.. + .-.+++.+.|++++.. .....+.. ..+
T Consensus 8 ~~viIiG~--G~~G-----~~la~~L~~~g~~v~vid~~-~--------~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 8 NHALLVGY--GRVG-----SLLGEKLLASDIPLVVIETS-R--------TRVDELRERGVRAVLGNAANEEIMQLAHLEC 71 (140)
T ss_dssp SCEEEECC--SHHH-----HHHHHHHHHTTCCEEEEESC-H--------HHHHHHHHTTCEEEESCTTSHHHHHHTTGGG
T ss_pred CCEEEECc--CHHH-----HHHHHHHHHCCCCEEEEECC-H--------HHHHHHHHcCCCEEECCCCCHHHHHhcCccc
Confidence 45888862 4444 47788999999999988733 2 1235666779987743 33333442 468
Q ss_pred cCEEEEechh
Q 023401 151 ADLIVLNTAV 160 (282)
Q Consensus 151 ~DLVIaNT~v 160 (282)
+|.||+.|--
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 9999986653
No 192
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=55.80 E-value=82 Score=25.86 Aligned_cols=40 Identities=23% Similarity=0.044 Sum_probs=21.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++++|-+|..+++..--.-++-.+...+++.|+++.+...
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 46 (277)
T 3e61_A 7 KSKLIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNS 46 (277)
T ss_dssp ---CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3455666666554333333455555667777777776553
No 193
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=55.54 E-value=30 Score=33.12 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=43.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++.... +..+.++...+.+.+.++||++...
T Consensus 286 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~ 346 (598)
T 2x8g_A 286 PGKTLVI-------GASYVALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKL 346 (598)
T ss_dssp CCSEEEE-------CCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHHcCCEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEEC
Confidence 5677777 566678999999999999999998431 1124456566777888889988743
No 194
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=55.52 E-value=29 Score=32.71 Aligned_cols=80 Identities=16% Similarity=0.344 Sum_probs=55.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhC---CCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh----
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV---GTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE---- 143 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~---G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~---- 143 (282)
+|++++| |+-..-+|+|..|++. |.+|.++..... ..+.++...+.+.+.++||++.......
T Consensus 191 ~~~vvVi-------GgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 263 (495)
T 2wpf_A 191 PRRVLTV-------GGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSL 263 (495)
T ss_dssp CSEEEEE-------CSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEE
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 4677777 5556788999999999 999999984432 1345666678888888999887542111
Q ss_pred ------HHH----HhhccCEEEEechh
Q 023401 144 ------TIN----TALKADLIVLNTAV 160 (282)
Q Consensus 144 ------~i~----~a~~~DLVIaNT~v 160 (282)
.+. ....+|+||..|-.
T Consensus 264 ~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 264 NTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred cCCceEEEEECCCcEEEcCEEEECCCC
Confidence 111 12458999987754
No 195
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=55.51 E-value=40 Score=31.25 Aligned_cols=59 Identities=19% Similarity=0.267 Sum_probs=44.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.|++++| |+-..-+|+|..|.+.|.+|.++.... +..+.++...+.+.+.++||.+...
T Consensus 187 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~ 247 (483)
T 3dgh_A 187 PGKTLVV-------GAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRK 247 (483)
T ss_dssp CCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEET
T ss_pred CCcEEEE-------CCCHHHHHHHHHHHHcCCEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeC
Confidence 4678887 455577899999999999999997421 1134566667788888899988754
No 196
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=55.22 E-value=65 Score=26.56 Aligned_cols=40 Identities=13% Similarity=0.059 Sum_probs=25.9
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+++|-+|.-+.+..--.-++-.+-..+++.|+++.+....
T Consensus 15 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 54 (298)
T 3tb6_A 15 NKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTN 54 (298)
T ss_dssp CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3667777776655444445566667777788887776543
No 197
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=54.82 E-value=24 Score=31.87 Aligned_cols=104 Identities=21% Similarity=0.146 Sum_probs=51.7
Q ss_pred ccccccccEEEEEe-c--cCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCc-------------hhhhhhhHHHHHH
Q 023401 68 PLSFMKSKLVLLVS-H--ELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE-------------DEVIYSLEHKMWD 131 (282)
Q Consensus 68 ~~~f~~~KkILLIS-H--ELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~-------------~~v~~~L~~kll~ 131 (282)
..-||++.|||+|. | +-|.+.+ ++=..++.|++.|++|.++=...-... ++...+..+.-..
T Consensus 16 ~~~~m~~MKiLII~aHP~~~S~n~a--L~~~~~~~l~~~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~ 93 (280)
T 4gi5_A 16 ENLYFQSMKVLLIYAHPEPRSLNGA--LKNFAIRHLQQAGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQA 93 (280)
T ss_dssp ------CCEEEEEECCSCTTSHHHH--HHHHHHHHHHHTTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHH
T ss_pred CcchhhCCeEEEEEeCCCCccHHHH--HHHHHHHHHHHCCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHH
Confidence 34688888888885 3 2233343 455677899999999998863321100 0000111111111
Q ss_pred cCCceeehhchhHHHHhhccCEEEEec--------hhchHHHHHHhhccC
Q 023401 132 RGVQVISAKGQETINTALKADLIVLNT--------AVAGKWLDAVLKEDV 173 (282)
Q Consensus 132 rgI~v~~~k~~~~i~~a~~~DLVIaNT--------~v~g~wl~~l~~~~~ 173 (282)
.+-....+--.+..+....+|.||.-+ +..=.|+|.++...+
T Consensus 94 ~~~~~~~~dv~~~~~~l~~aD~iv~~~P~~w~~~Pa~lK~~iDrv~~~g~ 143 (280)
T 4gi5_A 94 FAQGTQSADIVAEQEKLLWADTVIFQFPLWWFSMPAIMKGWIDRVYAWGF 143 (280)
T ss_dssp HHHTCSCHHHHHHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHSCBTT
T ss_pred hhcCCCcHHHHHHHHHHHhCCEEEEEeccccccCcHHHHHHHHHhcccCc
Confidence 111112221222334567899999875 344678888875444
No 198
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=54.76 E-value=42 Score=28.38 Aligned_cols=86 Identities=15% Similarity=0.156 Sum_probs=42.5
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhc
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKG 141 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~--~~k~ 141 (282)
+.|-..+++|.+|+.. |+-=+=.++|+.|.+.|+.|.++..+..+ ....+..++...+..+ + +-..
T Consensus 17 ~~p~~~~~~k~vlITG------as~gIG~~~a~~l~~~G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~ 86 (269)
T 3gk3_A 17 QGPGSMQAKRVAFVTG------GMGGLGAAISRRLHDAGMAVAVSHSERND----HVSTWLMHERDAGRDFKAYAVDVAD 86 (269)
T ss_dssp -------CCCEEEETT------TTSHHHHHHHHHHHTTTCEEEEEECSCHH----HHHHHHHHHHTTTCCCEEEECCTTC
T ss_pred CCchhhhcCCEEEEEC------CCchHHHHHHHHHHHCCCEEEEEcCCchH----HHHHHHHHHHhcCCceEEEEecCCC
Confidence 3455556777655422 22335578999999999999887644331 1111223333333322 2 1122
Q ss_pred hhHHH--------HhhccCEEEEechhc
Q 023401 142 QETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 142 ~~~i~--------~a~~~DLVIaNT~v~ 161 (282)
.++++ .....|.+|.|..+.
T Consensus 87 ~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (269)
T 3gk3_A 87 FESCERCAEKVLADFGKVDVLINNAGIT 114 (269)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 22222 224799999997753
No 199
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=54.68 E-value=32 Score=32.72 Aligned_cols=84 Identities=21% Similarity=0.198 Sum_probs=58.1
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh---------chhHH
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---------GQETI 145 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k---------~~~~i 145 (282)
+.|++++. +.+|=--+...||..+++.|..|.++...-- ....+.-|.......|++++... ..+.+
T Consensus 100 ~vI~ivG~--~GvGKTTla~~La~~l~~~G~kVllv~~D~~--r~~a~~qL~~~~~~~gv~v~~~~~~~~dp~~i~~~~l 175 (432)
T 2v3c_C 100 NVILLVGI--QGSGKTTTAAKLARYIQKRGLKPALIAADTY--RPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGM 175 (432)
T ss_dssp CCEEEECC--SSSSTTHHHHHHHHHHHHHHCCEEEECCSCC--CTTGGGSSHHHHHHSSCCEECCSSSCCSSSTTHHHHH
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecccc--CchHHHHHHHhhhccCcceEecCCCCCCHHHHHHHHH
Confidence 57888885 7899999999999999999999988874311 11122234443344588887642 11345
Q ss_pred HHhhccCEEEEechhch
Q 023401 146 NTALKADLIVLNTAVAG 162 (282)
Q Consensus 146 ~~a~~~DLVIaNT~v~g 162 (282)
..+.++|+||+-|+-..
T Consensus 176 ~~~~~~D~vIIDT~G~~ 192 (432)
T 2v3c_C 176 EKFKKADVLIIDTAGRH 192 (432)
T ss_dssp HTTSSCSEEEEECCCSC
T ss_pred HHhhCCCEEEEcCCCCc
Confidence 45678999999998654
No 200
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=54.61 E-value=14 Score=30.48 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=29.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
..+||+||+| .|.-.||+ -|.++++.|++.|..++
T Consensus 119 ~~~gk~VLlV-DDvitTG~--Tl~~~~~~L~~~Ga~~v 153 (187)
T 1g2q_A 119 IPAGSNVIIV-DDIIATGG--SAAAAGELVEQLEANLL 153 (187)
T ss_dssp SCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEE
T ss_pred CCCcCEEEEE-CCCcccHH--HHHHHHHHHHHcCCeEE
Confidence 3689999887 78888999 67799999999998854
No 201
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=54.58 E-value=32 Score=33.75 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=30.4
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
.+.+||++.+.. .|-....+++.|++.|.+|+.+....+
T Consensus 331 ~~l~GKrv~i~~-------~~~~~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 331 EKLQGKTACLYV-------GGSRSHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp HHHTTCEEEEEE-------SSSHHHHHHHHHHHHTCEEEEEEESSC
T ss_pred HHhCCCEEEEEC-------CchHHHHHHHHHHHCCCEEEEEEeccC
Confidence 577999999854 334678899999999999998874443
No 202
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=54.21 E-value=29 Score=28.78 Aligned_cols=84 Identities=17% Similarity=0.191 Sum_probs=44.0
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee--ehhchh
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SAKGQE 143 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~--~~k~~~ 143 (282)
+.+....++|+||+.. |+.=+=.++|+.|.+.|+.|.++..... .. ..+.+++. ..+... +-...+
T Consensus 6 ~~~~~~~~~k~vlVTG------as~gIG~~~a~~l~~~G~~V~~~~r~~~----~~-~~~~~~~~-~~~~~~~~D~~~~~ 73 (249)
T 3f9i_A 6 HHHMIDLTGKTSLITG------ASSGIGSAIARLLHKLGSKVIISGSNEE----KL-KSLGNALK-DNYTIEVCNLANKE 73 (249)
T ss_dssp ---CCCCTTCEEEETT------TTSHHHHHHHHHHHHTTCEEEEEESCHH----HH-HHHHHHHC-SSEEEEECCTTSHH
T ss_pred ccccccCCCCEEEEEC------CCChHHHHHHHHHHHCCCEEEEEcCCHH----HH-HHHHHHhc-cCccEEEcCCCCHH
Confidence 4566667888777643 2233567899999999999887763211 11 11222221 122222 112233
Q ss_pred HHH----HhhccCEEEEechhc
Q 023401 144 TIN----TALKADLIVLNTAVA 161 (282)
Q Consensus 144 ~i~----~a~~~DLVIaNT~v~ 161 (282)
++. .....|.+|.|..+.
T Consensus 74 ~~~~~~~~~~~id~li~~Ag~~ 95 (249)
T 3f9i_A 74 ECSNLISKTSNLDILVCNAGIT 95 (249)
T ss_dssp HHHHHHHTCSCCSEEEECCC--
T ss_pred HHHHHHHhcCCCCEEEECCCCC
Confidence 333 234699999988754
No 203
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=54.03 E-value=49 Score=27.29 Aligned_cols=79 Identities=10% Similarity=0.210 Sum_probs=44.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHHH
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETINT 147 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~--~~k~~~~i~~ 147 (282)
+++|+||+.. -+|+ +=.++++.|.+.|++|.++... .+ . ...+.+++...+.++ + +-....+++.
T Consensus 11 l~~k~vlItG----asgg--iG~~la~~l~~~G~~V~~~~r~-~~---~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 79 (260)
T 3awd_A 11 LDNRVAIVTG----GAQN--IGLACVTALAEAGARVIIADLD-EA---M-ATKAVEDLRMEGHDVSSVVMDVTNTESVQN 79 (260)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESC-HH---H-HHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC----CCch--HHHHHHHHHHHCCCEEEEEeCC-HH---H-HHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 5677766642 2333 5678999999999998887633 21 1 112334444444332 2 1122233321
Q ss_pred --------hhccCEEEEechhc
Q 023401 148 --------ALKADLIVLNTAVA 161 (282)
Q Consensus 148 --------a~~~DLVIaNT~v~ 161 (282)
...+|.||.|..+.
T Consensus 80 ~~~~~~~~~~~id~vi~~Ag~~ 101 (260)
T 3awd_A 80 AVRSVHEQEGRVDILVACAGIC 101 (260)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 23689999998653
No 204
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=54.00 E-value=29 Score=31.91 Aligned_cols=85 Identities=20% Similarity=0.200 Sum_probs=53.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC----chhhhhhhHHHHHHcCCceeehh---chhHHH-
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE----EDEVIYSLEHKMWDRGVQVISAK---GQETIN- 146 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~----~~~v~~~L~~kll~rgI~v~~~k---~~~~i~- 146 (282)
.||+|. |-|=+-....+.|.+.|++|+.+..+.... .....+++.+..++.||+++.-. ..+.++
T Consensus 5 mrIvf~-------Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~~~~~~~~~ 77 (317)
T 3rfo_A 5 IKVVFM-------GTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRIREKDEYEK 77 (317)
T ss_dssp SEEEEE-------CCSTTHHHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCTTSHHHHHH
T ss_pred eEEEEE-------eCCHHHHHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccCCCHHHHHH
Confidence 467765 666666677777778899998887653221 11122456888888999998542 223333
Q ss_pred -HhhccCEEEEe---chhchHHHH
Q 023401 147 -TALKADLIVLN---TAVAGKWLD 166 (282)
Q Consensus 147 -~a~~~DLVIaN---T~v~g~wl~ 166 (282)
...++|+||+- -++-...++
T Consensus 78 l~~~~~Dliv~~~y~~ilp~~~l~ 101 (317)
T 3rfo_A 78 VLALEPDLIVTAAFGQIVPNEILE 101 (317)
T ss_dssp HHHHCCSEEEESSCCSCCCHHHHH
T ss_pred HHhcCCCEEEEcCchhhCCHHHHh
Confidence 36789999975 244444444
No 205
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=53.92 E-value=70 Score=26.99 Aligned_cols=74 Identities=20% Similarity=0.152 Sum_probs=43.5
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-Hhh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TAL 149 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G-~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a~ 149 (282)
+|+||++. -||. +=-++++.|.+.| ++|..+...... . -.+.+...|+.++.. ....++. ...
T Consensus 5 ~~~ilVtG----atG~--iG~~l~~~L~~~g~~~V~~~~R~~~~--~-----~~~~l~~~~~~~~~~D~~d~~~l~~~~~ 71 (299)
T 2wm3_A 5 KKLVVVFG----GTGA--QGGSVARTLLEDGTFKVRVVTRNPRK--K-----AAKELRLQGAEVVQGDQDDQVIMELALN 71 (299)
T ss_dssp CCEEEEET----TTSH--HHHHHHHHHHHHCSSEEEEEESCTTS--H-----HHHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred CCEEEEEC----CCch--HHHHHHHHHHhcCCceEEEEEcCCCC--H-----HHHHHHHCCCEEEEecCCCHHHHHHHHh
Confidence 35555542 3333 4456778888878 999988754221 1 123445567776632 2334454 456
Q ss_pred ccCEEEEechh
Q 023401 150 KADLIVLNTAV 160 (282)
Q Consensus 150 ~~DLVIaNT~v 160 (282)
.+|.||.|+..
T Consensus 72 ~~d~vi~~a~~ 82 (299)
T 2wm3_A 72 GAYATFIVTNY 82 (299)
T ss_dssp TCSEEEECCCH
T ss_pred cCCEEEEeCCC
Confidence 79999988753
No 206
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=53.84 E-value=12 Score=33.83 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=28.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
..+||+++. ...|-=.-++.||+.|++.|++|.+++.
T Consensus 20 ~mrIl~~~~--~~~GHv~p~l~la~~L~~~GheV~~~~~ 56 (441)
T 2yjn_A 20 HMRVVFSSM--ASKSHLFGLVPLAWAFRAAGHEVRVVAS 56 (441)
T ss_dssp CCEEEEECC--SCHHHHTTTHHHHHHHHHTTCEEEEEEC
T ss_pred ccEEEEEcC--CCcchHhHHHHHHHHHHHCCCeEEEEeC
Confidence 357998854 2225444578999999999999999984
No 207
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=53.66 E-value=1e+02 Score=26.64 Aligned_cols=82 Identities=12% Similarity=0.121 Sum_probs=45.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETI 145 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i 145 (282)
.-++||++|+.. -+| =+=.++|+.|.+.|++|+++..+.. .....+.+.+.+.|..+. +-....++
T Consensus 43 ~~l~gk~vlVTG----as~--GIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 112 (291)
T 3ijr_A 43 EKLKGKNVLITG----GDS--GIGRAVSIAFAKEGANIAIAYLDEE----GDANETKQYVEKEGVKCVLLPGDLSDEQHC 112 (291)
T ss_dssp STTTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHTTTCCEEEEESCTTSHHHH
T ss_pred cCCCCCEEEEeC----CCc--HHHHHHHHHHHHCCCEEEEEeCCch----HHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence 346788777653 222 2556899999999999887764322 111122333444454433 11222222
Q ss_pred H--------HhhccCEEEEechhc
Q 023401 146 N--------TALKADLIVLNTAVA 161 (282)
Q Consensus 146 ~--------~a~~~DLVIaNT~v~ 161 (282)
+ .....|.+|.|....
T Consensus 113 ~~~~~~~~~~~g~iD~lvnnAg~~ 136 (291)
T 3ijr_A 113 KDIVQETVRQLGSLNILVNNVAQQ 136 (291)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCc
Confidence 2 234789999997653
No 208
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=53.53 E-value=25 Score=29.43 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=26.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
++||++|+.. -+|+.=+=.++|+.|.+.|+.|.++..+..
T Consensus 18 l~~k~vlITG----as~~~giG~~~a~~l~~~G~~v~~~~~~~~ 57 (267)
T 3gdg_A 18 LKGKVVVVTG----ASGPKGMGIEAARGCAEMGAAVAITYASRA 57 (267)
T ss_dssp CTTCEEEETT----CCSSSSHHHHHHHHHHHTSCEEEECBSSSS
T ss_pred cCCCEEEEEC----CCCCCChHHHHHHHHHHCCCeEEEEeCCcc
Confidence 5778666532 110013556899999999999988875443
No 209
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=53.04 E-value=53 Score=27.59 Aligned_cols=92 Identities=12% Similarity=-0.018 Sum_probs=50.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC-CCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK-PSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~-G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~ 150 (282)
|.+.+|-+|..+.+..--.-++-.+...+++.|+++.+..... ++.+.+. ...+.+ ...+
T Consensus 1 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~--~~i~~l-----------------~~~~ 61 (297)
T 3rot_A 1 MVRDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQV--QFIESA-----------------LATY 61 (297)
T ss_dssp --CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSCCHHHHH--HHHHHH-----------------HHTC
T ss_pred CceEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCCCcCCHHHHH--HHHHHH-----------------HHcC
Confidence 4567888888887544333345556677788898888776431 1100000 111111 2466
Q ss_pred cCEEEEechhc---hHHHHHHhhccCCCCCCceEEEeeec
Q 023401 151 ADLIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWWIHEM 187 (282)
Q Consensus 151 ~DLVIaNT~v~---g~wl~~l~~~~~~~~~~pVIWWIHE~ 187 (282)
+|.||+...-. ...++++.+.++ |||.+=...
T Consensus 62 vdgiii~~~~~~~~~~~~~~~~~~gi-----PvV~~~~~~ 96 (297)
T 3rot_A 62 PSGIATTIPSDTAFSKSLQRANKLNI-----PVIAVDTRP 96 (297)
T ss_dssp CSEEEECCCCSSTTHHHHHHHHHHTC-----CEEEESCCC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHCCC-----CEEEEcCCC
Confidence 88888765432 456666665566 666654443
No 210
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=52.94 E-value=42 Score=31.79 Aligned_cols=72 Identities=14% Similarity=0.286 Sum_probs=46.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
+.|+|++|. +..+| |--+|++|++.|++|...=.+.. ...+++.+.|+++..-.... ....+|
T Consensus 18 ~~~~v~viG--iG~sG----~s~~A~~l~~~G~~V~~~D~~~~--------~~~~~l~~~gi~~~~g~~~~---~~~~a~ 80 (491)
T 2f00_A 18 RVRHIHFVG--IGGAG----MGGIAEVLANEGYQISGSDLAPN--------PVTQQLMNLGATIYFNHRPE---NVRDAS 80 (491)
T ss_dssp TCCEEEEET--TTSTT----HHHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCEEESSCCGG---GGTTCS
T ss_pred cCCEEEEEE--cCHHH----HHHHHHHHHhCCCeEEEECCCCC--------HHHHHHHHCCCEEECCCCHH---HcCCCC
Confidence 357888875 34444 23378999999999886433221 23456777899987432222 235799
Q ss_pred EEEEechhc
Q 023401 153 LIVLNTAVA 161 (282)
Q Consensus 153 LVIaNT~v~ 161 (282)
+||+...+.
T Consensus 81 ~vv~s~~i~ 89 (491)
T 2f00_A 81 VVVVSSAIS 89 (491)
T ss_dssp EEEECTTCC
T ss_pred EEEECCCCC
Confidence 999998763
No 211
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=52.61 E-value=16 Score=31.81 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=29.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
..+||+||+| .|.-.||+ -+.+.++.|++.|..++
T Consensus 135 ~~~Gk~VLIV-DDvitTG~--Tl~~a~~~L~~~Ga~~v 169 (236)
T 1qb7_A 135 IGKGSRVVLI-DDVLATGG--TALSGLQLVEASDAVVV 169 (236)
T ss_dssp SCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEE
T ss_pred CCCcCEEEEE-ecccccHH--HHHHHHHHHHHcCCeEE
Confidence 3589998887 77778898 67899999999999865
No 212
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=52.05 E-value=42 Score=29.13 Aligned_cols=79 Identities=19% Similarity=0.184 Sum_probs=44.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCcee--ehhchhHHH-H
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVI--SAKGQETIN-T 147 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~--~~k~~~~i~-~ 147 (282)
++||++|++. -+|+ +=..+++.|.+.|.+|.+ +++..+. ...+.+++.. .++.++ +-....++. .
T Consensus 117 l~gk~vlVtG----aaGG--iG~aia~~L~~~G~~V~i-~~R~~~~----~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~ 185 (287)
T 1lu9_A 117 VKGKKAVVLA----GTGP--VGMRSAALLAGEGAEVVL-CGRKLDK----AQAAADSVNKRFKVNVTAAETADDASRAEA 185 (287)
T ss_dssp CTTCEEEEET----CSSH--HHHHHHHHHHHTTCEEEE-EESSHHH----HHHHHHHHHHHHTCCCEEEECCSHHHHHHH
T ss_pred CCCCEEEEEC----CCcH--HHHHHHHHHHHCcCEEEE-EECCHHH----HHHHHHHHHhcCCcEEEEecCCCHHHHHHH
Confidence 5788888763 2333 556788889999999554 4443321 1123333332 133333 222233443 4
Q ss_pred hhccCEEEEechhc
Q 023401 148 ALKADLIVLNTAVA 161 (282)
Q Consensus 148 a~~~DLVIaNT~v~ 161 (282)
..++|+||.||.+.
T Consensus 186 ~~~~DvlVn~ag~g 199 (287)
T 1lu9_A 186 VKGAHFVFTAGAIG 199 (287)
T ss_dssp TTTCSEEEECCCTT
T ss_pred HHhCCEEEECCCcc
Confidence 55699999999653
No 213
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=51.76 E-value=32 Score=31.99 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=27.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
.|.||+|+++. |+++- .+++..+++.|++|+++.
T Consensus 32 ~~~~~~IlIlG------~G~lg-~~~~~aa~~lG~~v~v~d 65 (419)
T 4e4t_A 32 ILPGAWLGMVG------GGQLG-RMFCFAAQSMGYRVAVLD 65 (419)
T ss_dssp CCTTCEEEEEC------CSHHH-HHHHHHHHHTTCEEEEEC
T ss_pred CCCCCEEEEEC------CCHHH-HHHHHHHHHCCCEEEEEC
Confidence 57899999996 56654 458889999999998875
No 214
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=51.42 E-value=45 Score=24.61 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=39.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC-CC-eEEEEeccCCCC---------chhhhhhhHHHHHHcCCceeeh
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GT-KVNWITIQKPSE---------EDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~-G~-~V~vL~~~~G~~---------~~~v~~~L~~kll~rgI~v~~~ 139 (282)
|-.+++++.-..+.....-+.+|.-+.+. |. +|.++...+|-. .+.-...+-+++.+.|++++--
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~~~~~~~~~~~~~~~l~~l~~~gv~v~~C 78 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLC 78 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBSCCCCSSSCCHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHhcCCCCCcCCCHHHHHHHHHHCCCEEEEe
Confidence 44555665544444445568888888888 99 999888666641 0101112334556678877744
No 215
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=51.26 E-value=68 Score=30.72 Aligned_cols=85 Identities=22% Similarity=0.244 Sum_probs=55.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------hhH
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------QET 144 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~--------~~~ 144 (282)
+++.|++++. +.+|=--++..||.+|++.|..|.++...-. ....+.-|...-...|++++.... ...
T Consensus 96 ~~~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~--r~~a~eqL~~~~~~~gv~~~~~~~~~dp~~i~~~a 171 (433)
T 3kl4_A 96 LPFIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY--RPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKG 171 (433)
T ss_dssp SSEEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS--CHHHHHHHHHHHHTTTCCEECCTTCSCHHHHHHHH
T ss_pred CCeEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc--chhHHHHHHHHHHhcCCceeeccccCCHHHHHHHH
Confidence 3566677665 7889999999999999999999999884422 111112222222334888774311 123
Q ss_pred HHHhh--ccCEEEEechhc
Q 023401 145 INTAL--KADLIVLNTAVA 161 (282)
Q Consensus 145 i~~a~--~~DLVIaNT~v~ 161 (282)
+..+. ++|+||+-|+--
T Consensus 172 l~~a~~~~~DvvIIDTaGr 190 (433)
T 3kl4_A 172 VDIFVKNKMDIIIVDTAGR 190 (433)
T ss_dssp HHHTTTTTCSEEEEEECCC
T ss_pred HHHHHhcCCCEEEEECCCC
Confidence 44444 799999999954
No 216
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=51.21 E-value=86 Score=26.40 Aligned_cols=79 Identities=14% Similarity=0.112 Sum_probs=43.7
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-Hhhcc
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TALKA 151 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a~~~ 151 (282)
|+||+++ -||. +=-++++.|.+.|++|.++.........+-...+ +.+...|+.++.. ....++. .+..+
T Consensus 5 ~~ilVtG----atG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 5 SRVLIVG----GTGY--IGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFKQLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp CCEEEES----TTST--THHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHHTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CEEEEEc----CCcH--HHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHHhCCeEEEeCCCCCHHHHHHHHhCC
Confidence 5566553 2333 3346778888889999888754321101110011 2234457776632 2334454 45679
Q ss_pred CEEEEechh
Q 023401 152 DLIVLNTAV 160 (282)
Q Consensus 152 DLVIaNT~v 160 (282)
|.||.++..
T Consensus 78 d~vi~~a~~ 86 (313)
T 1qyd_A 78 DVVISALAG 86 (313)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999988764
No 217
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=51.18 E-value=57 Score=25.35 Aligned_cols=93 Identities=16% Similarity=0.005 Sum_probs=44.8
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC--ch-------hhhhhhHHHHHHcCCce
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE--ED-------EVIYSLEHKMWDRGVQV 136 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~--~~-------~v~~~L~~kll~rgI~v 136 (282)
+++.+-|.-|+||+-...-|- .+.-++-..+.+.+..|.++.++.-..++. .. +....+.+.+.+.|+++
T Consensus 16 ~~~~~~mm~~~ILv~vD~~s~-~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~ 94 (155)
T 3dlo_A 16 NLYFQGMIYMPIVVAVDKKSD-RAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEG 94 (155)
T ss_dssp ------CCCCCEEEECCSSSH-HHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCcccccccCeEEEEECCCCH-HHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 344555667777776633022 233344444455566688998888443321 11 11122233444457664
Q ss_pred eeh------hchhHH-HHhh--ccCEEEEech
Q 023401 137 ISA------KGQETI-NTAL--KADLIVLNTA 159 (282)
Q Consensus 137 ~~~------k~~~~i-~~a~--~~DLVIaNT~ 159 (282)
-.. .-.+.| +.+. ++||||..+-
T Consensus 95 ~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~ 126 (155)
T 3dlo_A 95 EEHLLVRGKEPPDDIVDFADEVDAIAIVIGIR 126 (155)
T ss_dssp EEEEEESSSCHHHHHHHHHHHTTCSEEEEECC
T ss_pred eEEEEecCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 321 122233 3455 8999999864
No 218
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=51.11 E-value=44 Score=28.07 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=41.4
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
..++|++++| |+-..-+|+|..|++.|.+|.++......... ....+++.++||.+...
T Consensus 151 ~~~~~~v~vv-------G~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~---~~~~~~l~~~gv~~~~~ 209 (332)
T 3lzw_A 151 KFAGRRVAIL-------GGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH---EHSVENLHASKVNVLTP 209 (332)
T ss_dssp GGBTCEEEEE-------CSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC---HHHHHHHHHSSCEEETT
T ss_pred HcCCCEEEEE-------CCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc---HHHHHHHhcCCeEEEeC
Confidence 3468899988 44456789999999999999998744322111 12346678889988764
No 219
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=51.09 E-value=27 Score=33.05 Aligned_cols=65 Identities=14% Similarity=0.137 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccCEEEEechhc--hHHHHHHh
Q 023401 94 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVA--GKWLDAVL 169 (282)
Q Consensus 94 leLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~DLVIaNT~v~--g~wl~~l~ 169 (282)
--+|++|++.|++|...=.+.. ...+++.+.|+++..-.... ...++|+||.+..+. .+.+.+..
T Consensus 26 sglA~~l~~~G~~V~g~D~~~~--------~~~~~L~~~gi~~~~g~~~~---~~~~~d~vV~spgi~~~~p~~~~a~ 92 (469)
T 1j6u_A 26 SAVALHEFSNGNDVYGSNIEET--------ERTAYLRKLGIPIFVPHSAD---NWYDPDLVIKTPAVRDDNPEIVRAR 92 (469)
T ss_dssp HHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCCEESSCCTT---SCCCCSEEEECTTCCTTCHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEcCCCC--------HHHHHHHhCCCEEECCCCHH---HCCCCCEEEECCCcCCCCHHHHHHH
Confidence 3459999999999886432221 22356777899998631111 124799999999974 45555444
No 220
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=51.03 E-value=33 Score=29.12 Aligned_cols=88 Identities=13% Similarity=0.098 Sum_probs=47.3
Q ss_pred cEEEEEe-ccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--Hhhc
Q 023401 75 KLVLLVS-HELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN--TALK 150 (282)
Q Consensus 75 KkILLIS-HELs~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~--~a~~ 150 (282)
++||||. ++--| .|+.=-=+-.++.+.|..+.+-. +-.+..++.+-+.-.+-+.++||..- .+ -+++. ....
T Consensus 35 ~~VLFVC~gNiCR--SpmAEai~r~~~~~~g~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-hr-ar~lt~~d~~~ 110 (184)
T 4etn_A 35 MDIIFVCTGNTSR--SPMAEALFKSIAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-HV-SSPLTEELMES 110 (184)
T ss_dssp EEEEEEESSSSSH--HHHHHHHHHHHHHHHTCCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-CB-CCBCCHHHHHH
T ss_pred CEEEEECCCchhH--HHHHHHHHHHHHHhcCCcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-hc-cCcCCHHHcCC
Confidence 5899995 44444 35443333345555565665555 32221122333344566777899876 32 22232 3678
Q ss_pred cCEEEEechhchHHHH
Q 023401 151 ADLIVLNTAVAGKWLD 166 (282)
Q Consensus 151 ~DLVIaNT~v~g~wl~ 166 (282)
||+||+=+--....+.
T Consensus 111 ~DlIltMd~~~~~~l~ 126 (184)
T 4etn_A 111 ADLVLAMTHQHKQIIA 126 (184)
T ss_dssp CSEEEESSHHHHHHHH
T ss_pred CCEEEEcCcHHHHHHH
Confidence 9999986653333333
No 221
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=51.02 E-value=25 Score=28.15 Aligned_cols=38 Identities=13% Similarity=-0.176 Sum_probs=29.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
+--+++||+ +|-.--+.++++..|+.|..++.+++..+
T Consensus 88 ~d~~i~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 88 TDLMIGVSV----WRYLRDTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp TEEEEEECC----SSCCHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred CCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 444555554 67777889999999999999999996655
No 222
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=50.99 E-value=91 Score=26.31 Aligned_cols=80 Identities=21% Similarity=0.205 Sum_probs=45.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||+||+. + |+.=+=.++|+.|.+.|++|.++..+.. +....+.+++.+.|..+. +-...+++.
T Consensus 27 l~~k~vlIT----G--as~gIG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 96 (271)
T 4iin_A 27 FTGKNVLIT----G--ASKGIGAEIAKTLASMGLKVWINYRSNA----EVADALKNELEEKGYKAAVIKFDAASESDFIE 96 (271)
T ss_dssp CSCCEEEET----T--CSSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred cCCCEEEEE----C--CCcHHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 467766652 1 2233557899999999999888774332 122234455555554332 112222222
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
....+|.+|.|..+.
T Consensus 97 ~~~~~~~~~g~id~li~nAg~~ 118 (271)
T 4iin_A 97 AIQTIVQSDGGLSYLVNNAGVV 118 (271)
T ss_dssp HHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCcC
Confidence 224799999998763
No 223
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=50.92 E-value=19 Score=33.87 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=46.8
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee--ehhchhHHHH--hhc
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SAKGQETINT--ALK 150 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~--~~k~~~~i~~--a~~ 150 (282)
.+|++++. ++.| ..+++.|++.|++|+++-.. + ...+++.+.|++++ +......+.. ..+
T Consensus 5 ~~viIiG~--Gr~G-----~~va~~L~~~g~~vvvId~d-~--------~~v~~~~~~g~~vi~GDat~~~~L~~agi~~ 68 (413)
T 3l9w_A 5 MRVIIAGF--GRFG-----QITGRLLLSSGVKMVVLDHD-P--------DHIETLRKFGMKVFYGDATRMDLLESAGAAK 68 (413)
T ss_dssp CSEEEECC--SHHH-----HHHHHHHHHTTCCEEEEECC-H--------HHHHHHHHTTCCCEESCTTCHHHHHHTTTTT
T ss_pred CeEEEECC--CHHH-----HHHHHHHHHCCCCEEEEECC-H--------HHHHHHHhCCCeEEEcCCCCHHHHHhcCCCc
Confidence 45788773 4444 47789999999999998732 2 12356667899988 3344444543 478
Q ss_pred cCEEEEech
Q 023401 151 ADLIVLNTA 159 (282)
Q Consensus 151 ~DLVIaNT~ 159 (282)
+|.||+-|-
T Consensus 69 A~~viv~~~ 77 (413)
T 3l9w_A 69 AEVLINAID 77 (413)
T ss_dssp CSEEEECCS
T ss_pred cCEEEECCC
Confidence 999998664
No 224
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=50.61 E-value=42 Score=27.87 Aligned_cols=42 Identities=10% Similarity=-0.107 Sum_probs=24.9
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCC---CeEEEEecc
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG---TKVNWITIQ 113 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G---~~V~vL~~~ 113 (282)
+.+...+++|+||+.. -+| -+=.++|+.|.+.| ++|.++...
T Consensus 13 ~~~~~~~~~k~vlITG----asg--gIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 13 GLVPRGSHMNSILITG----CNR--GLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp -------CCSEEEESC----CSS--HHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred cccccCCCCCEEEEEC----CCC--cHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 4566678888776642 222 25578999999999 888877743
No 225
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=50.60 E-value=44 Score=31.41 Aligned_cols=72 Identities=14% Similarity=0.290 Sum_probs=46.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
+.|+|++|. +..|| |--+|++|++.|++|...=.+.. ...+++.+.|+++..-.... ....+|
T Consensus 17 ~~~~i~viG--~G~sG----~s~~A~~l~~~G~~V~~~D~~~~--------~~~~~l~~~gi~~~~g~~~~---~~~~a~ 79 (475)
T 1p3d_A 17 RVQQIHFIG--IGGAG----MSGIAEILLNEGYQISGSDIADG--------VVTQRLAQAGAKIYIGHAEE---HIEGAS 79 (475)
T ss_dssp TCCEEEEET--TTSTT----HHHHHHHHHHHTCEEEEEESCCS--------HHHHHHHHTTCEEEESCCGG---GGTTCS
T ss_pred cCCEEEEEe--ecHHH----HHHHHHHHHhCCCEEEEECCCCC--------HHHHHHHhCCCEEECCCCHH---HcCCCC
Confidence 357888885 34444 22378899999999886543221 23456777899987542222 235799
Q ss_pred EEEEechhc
Q 023401 153 LIVLNTAVA 161 (282)
Q Consensus 153 LVIaNT~v~ 161 (282)
+||+...+.
T Consensus 80 ~vv~s~~i~ 88 (475)
T 1p3d_A 80 VVVVSSAIK 88 (475)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCC
Confidence 999998763
No 226
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=50.54 E-value=38 Score=32.04 Aligned_cols=59 Identities=20% Similarity=0.338 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.|++++| |+-..-+|+|..|++.|.+|.++.... +..+.++...+.+.+.++||++...
T Consensus 210 ~~~vvVI-------GgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~ 270 (519)
T 3qfa_A 210 PGKTLVV-------GASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQ 270 (519)
T ss_dssp CCSEEEE-------CCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCeEEEE-------CCcHHHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeC
Confidence 3557777 455577899999999999999997421 1135567677788888899998754
No 227
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=50.40 E-value=58 Score=26.73 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=24.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
+++|++|+.. -+|+ +=.++++.|.+.|++|.++..
T Consensus 9 ~~~k~vlITG----asgg--iG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 9 LDGACAAVTG----AGSG--IGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 5677766542 2332 556899999999999887763
No 228
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=50.34 E-value=77 Score=26.40 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=43.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
|+||++|+.. -+|+ +=.++|+.|.+.|++|.++..+..+ .+++.+.+.|..+. +-...++++
T Consensus 5 l~~k~vlVTG----as~g--IG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 71 (249)
T 2ew8_A 5 LKDKLAVITG----GANG--IGRAIAERFAVEGADIAIADLVPAP-------EAEAAIRNLGRRVLTVKCDVSQPGDVEA 71 (249)
T ss_dssp TTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESSCCH-------HHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC----CCcH--HHHHHHHHHHHCCCEEEEEcCCchh-------HHHHHHHhcCCcEEEEEeecCCHHHHHH
Confidence 5678666542 2222 5568899999999998887643211 23334444443322 112223332
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
....+|.+|.|..+.
T Consensus 72 ~~~~~~~~~g~id~lv~nAg~~ 93 (249)
T 2ew8_A 72 FGKQVISTFGRCDILVNNAGIY 93 (249)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 134799999998653
No 229
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=50.30 E-value=72 Score=26.65 Aligned_cols=82 Identities=18% Similarity=0.205 Sum_probs=45.0
Q ss_pred ccccccccEEEEEeccCCCCCch--HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC---Ccee--ehh
Q 023401 68 PLSFMKSKLVLLVSHELSLSGGP--LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG---VQVI--SAK 140 (282)
Q Consensus 68 ~~~f~~~KkILLISHELs~TGAP--LlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rg---I~v~--~~k 140 (282)
+..-+++|++|+ |||- =+=.++|+.|.+.|+.|.++... .+ . ...+.+++.+.+ +..+ +-.
T Consensus 16 ~~~~l~~k~vlI-------TGasg~GIG~~~a~~l~~~G~~V~~~~r~-~~---~-~~~~~~~l~~~~~~~~~~~~~Dl~ 83 (266)
T 3o38_A 16 GHGLLKGKVVLV-------TAAAGTGIGSTTARRALLEGADVVISDYH-ER---R-LGETRDQLADLGLGRVEAVVCDVT 83 (266)
T ss_dssp CCSTTTTCEEEE-------SSCSSSSHHHHHHHHHHHTTCEEEEEESC-HH---H-HHHHHHHHHTTCSSCEEEEECCTT
T ss_pred cccCCCCCEEEE-------ECCCCCchHHHHHHHHHHCCCEEEEecCC-HH---H-HHHHHHHHHhcCCCceEEEEeCCC
Confidence 344478887766 3331 25568999999999998776633 21 1 112334443332 2222 112
Q ss_pred chhHHH--------HhhccCEEEEechhc
Q 023401 141 GQETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 141 ~~~~i~--------~a~~~DLVIaNT~v~ 161 (282)
..++++ ....+|.+|.|..+.
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 84 STEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 222232 224689999998753
No 230
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=50.08 E-value=60 Score=27.92 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=38.2
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhchh
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKGQE 143 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k~~~ 143 (282)
+++..-.++|+||+.+ -|| -+=-++++.|.+.|++|..+...... .++..+. -....
T Consensus 11 ~~~~~~~~~~~vlVtG----atG--~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~ 69 (347)
T 4id9_A 11 SSGLVPRGSHMILVTG----SAG--RVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQ 69 (347)
T ss_dssp ----------CEEEET----TTS--HHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHH
T ss_pred CCcccccCCCEEEEEC----CCC--hHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHH
Confidence 4555666778887752 233 35668889999999999998754321 2333331 12233
Q ss_pred HHH-HhhccCEEEEechh
Q 023401 144 TIN-TALKADLIVLNTAV 160 (282)
Q Consensus 144 ~i~-~a~~~DLVIaNT~v 160 (282)
.+. ...++|.||-+...
T Consensus 70 ~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 70 ALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp HHHHHHTTCSEEEECCCC
T ss_pred HHHHHHhCCCEEEECCcc
Confidence 333 34578988876543
No 231
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=49.85 E-value=18 Score=29.70 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=28.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
-.+||+||+| .|.=.||+ -|.+.++.|++.|...+
T Consensus 92 ~~~gk~VllV-DDvi~TG~--Tl~~a~~~L~~~ga~~v 126 (183)
T 1hgx_A 92 NIEGRHVLVV-EDIIDTGL--TMYQLLNNLQMRKPASL 126 (183)
T ss_dssp CCTTSEEEEE-EEEESSSH--HHHHHHHHHHTTCCSEE
T ss_pred CCCCCEEEEE-CCccCCHH--HHHHHHHHHHhcCCCEE
Confidence 3789998877 77778998 67789999999988633
No 232
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=49.83 E-value=58 Score=26.82 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=26.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
++||++|+.. |+.=+=.++|+.|.+.|+.|.++..+..
T Consensus 5 l~~k~vlITG------as~gIG~~~a~~l~~~G~~v~~~~~~~~ 42 (255)
T 3icc_A 5 LKGKVALVTG------ASRGIGRAIAKRLANDGALVAIHYGNRK 42 (255)
T ss_dssp TTTCEEEETT------CSSHHHHHHHHHHHHTTCEEEEEESSCS
T ss_pred cCCCEEEEEC------CCChHHHHHHHHHHHCCCeEEEEeCCch
Confidence 5677666522 2223557899999999999988875544
No 233
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=49.15 E-value=48 Score=30.49 Aligned_cols=59 Identities=22% Similarity=0.452 Sum_probs=44.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++..... ..+.++...+.+.+.++|+++...
T Consensus 170 ~~~v~Vi-------GgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 231 (463)
T 4dna_A 170 PESILIA-------GGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCE 231 (463)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECC
Confidence 6788887 3444668999999999999999874432 235566677888888899988764
No 234
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=48.74 E-value=1.1e+02 Score=25.77 Aligned_cols=80 Identities=10% Similarity=0.174 Sum_probs=44.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCch--hhhhhhHHHHHHcCCceeeh--hchhHHH-Hh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEED--EVIYSLEHKMWDRGVQVISA--KGQETIN-TA 148 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~--~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a 148 (282)
+|+||+++ -||. +=-++++.|.+.|++|.++........+ +-...+ +++...|+.++.. ....++. .+
T Consensus 2 ~~~vlVtG----atG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILG----PTGA--IGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSLGVILLEGDINDHETLVKAI 74 (307)
T ss_dssp CCCEEEES----TTST--THHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred CcEEEEEC----CCch--HHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhCCCEEEEeCCCCHHHHHHHH
Confidence 35566553 2332 3346677788889999888754311110 110111 2344568777632 3344554 45
Q ss_pred hccCEEEEechh
Q 023401 149 LKADLIVLNTAV 160 (282)
Q Consensus 149 ~~~DLVIaNT~v 160 (282)
..+|.||.|+..
T Consensus 75 ~~~d~vi~~a~~ 86 (307)
T 2gas_A 75 KQVDIVICAAGR 86 (307)
T ss_dssp TTCSEEEECSSS
T ss_pred hCCCEEEECCcc
Confidence 679999988753
No 235
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=48.67 E-value=49 Score=27.09 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=43.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
+++|+||+.. -+| -+=.++++.|.+.|++|.++... .+ . ...+.+++...+..+. +-....+++
T Consensus 9 ~~~~~vlVtG----asg--giG~~la~~l~~~G~~V~~~~r~-~~---~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 77 (255)
T 1fmc_A 9 LDGKCAIITG----AGA--GIGKEIAITFATAGASVVVSDIN-AD---A-ANHVVDEIQQLGGQAFACRCDITSEQELSA 77 (255)
T ss_dssp CTTCEEEETT----TTS--HHHHHHHHHHHTTTCEEEEEESC-HH---H-HHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----Ccc--HHHHHHHHHHHHCCCEEEEEcCC-HH---H-HHHHHHHHHHhCCceEEEEcCCCCHHHHHH
Confidence 5778766542 223 35578899999999998877633 21 1 1123344444443322 112222332
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
....+|.||.|....
T Consensus 78 ~~~~~~~~~~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 78 LADFAISKLGKVDILVNNAGGG 99 (255)
T ss_dssp HHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCCC
Confidence 123799999987653
No 236
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=48.43 E-value=1.2e+02 Score=25.98 Aligned_cols=83 Identities=14% Similarity=0.211 Sum_probs=45.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchh---hhhhhHHHHHHcCCcee----ehhchhH
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE---VIYSLEHKMWDRGVQVI----SAKGQET 144 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~---v~~~L~~kll~rgI~v~----~~k~~~~ 144 (282)
+++|.+|+.. -+| =+=.++|+.|.+.|+.|.++...... ..+ -...+.+++...|..+. +-...++
T Consensus 7 l~~k~vlVTG----as~--GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 79 (285)
T 3sc4_A 7 LRGKTMFISG----GSR--GIGLAIAKRVAADGANVALVAKSAEP-HPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDA 79 (285)
T ss_dssp CTTCEEEEES----CSS--HHHHHHHHHHHTTTCEEEEEESCCSC-CSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHH
T ss_pred CCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEECChhh-hhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 5777666643 122 25568999999999998887744321 111 11223445555554433 1122222
Q ss_pred HH--------HhhccCEEEEechhc
Q 023401 145 IN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 145 i~--------~a~~~DLVIaNT~v~ 161 (282)
++ .....|.+|.|..+.
T Consensus 80 v~~~~~~~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 80 VAAAVAKTVEQFGGIDICVNNASAI 104 (285)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 22 234799999997653
No 237
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=48.10 E-value=22 Score=33.59 Aligned_cols=40 Identities=10% Similarity=0.146 Sum_probs=30.8
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
.-++||++|+| .|.=.||+ -+.+.++.|++.|...+.+..
T Consensus 268 g~v~Gk~viiV-DDii~TG~--Tl~~a~~~L~~~Ga~~v~~~~ 307 (379)
T 2ji4_A 268 GDVGGRIAIIV-DDIIDDVD--SFLAAAETLKERGAYKIFVMA 307 (379)
T ss_dssp SCCTTSEEEEE-EEEECSCH--HHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCCEEEEE-ecCCCchH--HHHHHHHHHHhcCCCEEEEEE
Confidence 45899988877 55556777 677999999999998665554
No 238
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=48.06 E-value=20 Score=29.67 Aligned_cols=35 Identities=29% Similarity=0.178 Sum_probs=28.8
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
-.+||+||+| .|.=.||+ -|.+.++.|++.|...+
T Consensus 95 ~~~gk~VllV-DDvi~TG~--Tl~~a~~~L~~~Ga~~V 129 (185)
T 2geb_A 95 DIEGKDVLIV-EDIIDSGL--TLAYLRETLLGRKPRSL 129 (185)
T ss_dssp CCTTSEEEEE-EEEESSCH--HHHHHHHHHHTTCCSEE
T ss_pred CCCCCEEEEE-CCccCCHH--HHHHHHHHHHhcCCCEE
Confidence 4689999887 77888998 67789999999988744
No 239
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=47.96 E-value=85 Score=27.00 Aligned_cols=81 Identities=17% Similarity=0.220 Sum_probs=46.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee--ehh---c----hh
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SAK---G----QE 143 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~--~~k---~----~~ 143 (282)
|..+|+|..-+ .|-.|....++. +++++.+..+.+.. .-.+...+.|||++ ..+ . .+
T Consensus 2 riaVl~SG~Gs------~L~aLi~~~~~~~~~~~I~~Vvs~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~ 69 (209)
T 1meo_A 2 RVAVLISGTGS------NLQALIDSTREPNSSAQIDIVISNKAAV------AGLDKAERAGIPTRVINHKLYKNRVEFDS 69 (209)
T ss_dssp EEEEEESSSCT------THHHHHHHHHSTTCSCEEEEEEESSTTC------HHHHHHHHTTCCEEECCGGGSSSHHHHHH
T ss_pred eEEEEEECCch------HHHHHHHHHhcCCCCcEEEEEEeCCCCh------HHHHHHHHcCCCEEEECccccCchhhhhH
Confidence 45677775543 344555555553 68888777554421 12456778899997 221 1 12
Q ss_pred HH-H--HhhccCEEEEec---hhchHHHHH
Q 023401 144 TI-N--TALKADLIVLNT---AVAGKWLDA 167 (282)
Q Consensus 144 ~i-~--~a~~~DLVIaNT---~v~g~wl~~ 167 (282)
++ + ...++|+|++-. ++....++.
T Consensus 70 ~~~~~l~~~~~Dliv~a~y~~il~~~~l~~ 99 (209)
T 1meo_A 70 AIDLVLEEFSIDIVCLAGFMRILSGPFVQK 99 (209)
T ss_dssp HHHHHHHHTTCCEEEEESCCSCCCHHHHHH
T ss_pred HHHHHHHhcCCCEEEEcchhhhCCHHHHhh
Confidence 22 2 256799998754 444455553
No 240
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=47.85 E-value=40 Score=29.08 Aligned_cols=60 Identities=12% Similarity=0.115 Sum_probs=38.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC----------chhhhhhhHHHHHHcC-Cceeeh
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE----------EDEVIYSLEHKMWDRG-VQVISA 139 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~----------~~~v~~~L~~kll~rg-I~v~~~ 139 (282)
.+|+|++| |+-..-+|+|..|.+.|.+|.++....... .......+.+.+.++| |.+...
T Consensus 165 ~~~~vvVv-------G~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~ 235 (369)
T 3d1c_A 165 NKGQYVVI-------GGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVH 235 (369)
T ss_dssp CSSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEEE-------CCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecC
Confidence 67888888 444567899999999999999987443210 1122234555556665 877643
No 241
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=47.69 E-value=28 Score=30.74 Aligned_cols=78 Identities=19% Similarity=0.077 Sum_probs=41.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHh--hccC
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTA--LKAD 152 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a--~~~D 152 (282)
++|+++-=--|..|-= +-+|+.|.+.|++|.++...... ..+......+.+.+.|+++........+... ..+|
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~d 134 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYPKRSE-RTEFYKQLVHQLNFFKVPVLSQDEGNWLEYLKPEKTL 134 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECCCCCT-TCHHHHHHHHHHHHTTCCEECSSTTCGGGGGSTTTEE
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEcCCCC-CCHHHHHHHHHHHHcCCcEEeccchhhhhhcccCCCc
Confidence 3555544344444442 56799999999999987633222 2222223345555668887532111111112 3578
Q ss_pred EEEE
Q 023401 153 LIVL 156 (282)
Q Consensus 153 LVIa 156 (282)
+||=
T Consensus 135 liID 138 (246)
T 1jzt_A 135 CIVD 138 (246)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8763
No 242
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=47.54 E-value=1.2e+02 Score=25.66 Aligned_cols=85 Identities=15% Similarity=0.214 Sum_probs=50.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh----hchhHHH-H
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA----KGQETIN-T 147 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~----k~~~~i~-~ 147 (282)
..++|++-. |.+. .+.-.+-.++.+.+..|.++.++....++...+....+.+.+.+.|+++... ...+.|. .
T Consensus 169 ~~~~Ilv~~-d~s~-~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~ 246 (294)
T 3loq_A 169 LFDRVLVAY-DFSK-WADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAK 246 (294)
T ss_dssp TTSEEEEEC-CSSH-HHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHH
T ss_pred cCCEEEEEE-CCCH-HHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHH
Confidence 346677655 3332 3444555555666677999999985544333444455666777778874422 2223332 3
Q ss_pred h--hccCEEEEech
Q 023401 148 A--LKADLIVLNTA 159 (282)
Q Consensus 148 a--~~~DLVIaNT~ 159 (282)
+ .++|||+.++-
T Consensus 247 a~~~~~dLlV~G~~ 260 (294)
T 3loq_A 247 REEINATTIFMGSR 260 (294)
T ss_dssp HHHTTCSEEEEECC
T ss_pred HHhcCcCEEEEeCC
Confidence 3 37999999885
No 243
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=47.52 E-value=40 Score=31.45 Aligned_cols=80 Identities=15% Similarity=0.270 Sum_probs=53.5
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeehhchhH------
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISAKGQET------ 144 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~k~~~~------ 144 (282)
+|++++| |+-..-+|+|..|.+.|.+|.++...... ...++...+.+.+.++|+++.....-..
T Consensus 182 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~ 254 (499)
T 1xdi_A 182 PDHLIVV-------GSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGA 254 (499)
T ss_dssp CSSEEEE-------SCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 4566666 45567889999999999999988744322 3456667788888889998875421111
Q ss_pred ---HH----HhhccCEEEEechh
Q 023401 145 ---IN----TALKADLIVLNTAV 160 (282)
Q Consensus 145 ---i~----~a~~~DLVIaNT~v 160 (282)
+. ....+|.||..|-.
T Consensus 255 ~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 255 GVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp SEEEEETTSCEEEESEEEECCCE
T ss_pred EEEEEECCCcEEEcCEEEECCCC
Confidence 11 12358888886654
No 244
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=47.30 E-value=20 Score=30.10 Aligned_cols=35 Identities=29% Similarity=0.178 Sum_probs=28.8
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
-.+||+||+| .|.=.||+ -|.+.++.|++.|...+
T Consensus 115 ~~~gk~VllV-DDvi~TG~--Tl~~a~~~L~~~Ga~~V 149 (205)
T 1yfz_A 115 DIEGKDVLIV-EDIIDSGL--TLAYLRETLLGRKPRSL 149 (205)
T ss_dssp CCTTSEEEEE-EEEESSCH--HHHHHHHHHHTTCCSEE
T ss_pred CCCcCEEEEE-CCccCcHH--HHHHHHHHHHhcCCCEE
Confidence 4689998887 78888999 66789999999987643
No 245
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=47.30 E-value=64 Score=26.84 Aligned_cols=67 Identities=13% Similarity=0.128 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH--------HhhccCEEEEec
Q 023401 91 LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN--------TALKADLIVLNT 158 (282)
Q Consensus 91 LlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~--------~a~~~DLVIaNT 158 (282)
=+=.++|+.|.+.|++|.++..+..+ -...+.+++.+.|..+. +-...++++ .....|.+|.|.
T Consensus 15 gIG~~ia~~l~~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA 90 (246)
T 3osu_A 15 GIGRSIALQLAEEGYNVAVNYAGSKE----KAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA 90 (246)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35578999999999999887744321 11233455555554443 112222222 234799999998
Q ss_pred hhc
Q 023401 159 AVA 161 (282)
Q Consensus 159 ~v~ 161 (282)
.+.
T Consensus 91 g~~ 93 (246)
T 3osu_A 91 GIT 93 (246)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 246
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=47.18 E-value=96 Score=26.87 Aligned_cols=74 Identities=24% Similarity=0.300 Sum_probs=44.2
Q ss_pred ccccEE-EEEeccCCCCCchHHHHHHHHHHHhCC--CeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hc-----
Q 023401 72 MKSKLV-LLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KG----- 141 (282)
Q Consensus 72 ~~~KkI-LLISHELs~TGAPLlLleLA~~Lkq~G--~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~----- 141 (282)
|..++| +|+| |.+--|-.+...+++.+ ++|+.+.+++++.. + .+...+.|||++.- +.
T Consensus 5 m~~~ri~vl~S------G~gsnl~all~~~~~~~l~~~I~~Visn~~~a~-----~-l~~A~~~gIp~~~~~~~~~~~r~ 72 (209)
T 4ds3_A 5 MKRNRVVIFIS------GGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAG-----G-LAKAEAAGIATQVFKRKDFASKE 72 (209)
T ss_dssp -CCEEEEEEES------SCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCT-----H-HHHHHHTTCCEEECCGGGSSSHH
T ss_pred CCCccEEEEEE------CCcHHHHHHHHHHHcCCCCcEEEEEEECCcccH-----H-HHHHHHcCCCEEEeCccccCCHH
Confidence 444444 5654 44557778888887643 57777776554321 2 35677789999842 11
Q ss_pred --hhHH-H--HhhccCEEEEe
Q 023401 142 --QETI-N--TALKADLIVLN 157 (282)
Q Consensus 142 --~~~i-~--~a~~~DLVIaN 157 (282)
.+++ + ...++|+|++-
T Consensus 73 ~~d~~~~~~l~~~~~Dliv~a 93 (209)
T 4ds3_A 73 AHEDAILAALDVLKPDIICLA 93 (209)
T ss_dssp HHHHHHHHHHHHHCCSEEEES
T ss_pred HHHHHHHHHHHhcCCCEEEEe
Confidence 1222 2 35679999974
No 247
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=47.05 E-value=36 Score=28.96 Aligned_cols=58 Identities=22% Similarity=0.279 Sum_probs=39.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll-~rgI~v~~~ 139 (282)
..+|+|++| |+-..-+|+|..|.+.|.+|.++......... ..+.++++ ++||++...
T Consensus 157 ~~~~~v~Vv-------G~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~---~~~~~~~~~~~gv~i~~~ 215 (333)
T 1vdc_A 157 FRNKPLAVI-------GGGDSAMEEANFLTKYGSKVYIIHRRDAFRAS---KIMQQRALSNPKIDVIWN 215 (333)
T ss_dssp GTTSEEEEE-------CCSHHHHHHHHHHTTTSSEEEEECSSSSCCSC---HHHHHHHHTCTTEEEECS
T ss_pred cCCCeEEEE-------CCChHHHHHHHHHHhcCCeEEEEecCCcCCcc---HHHHHHHHhCCCeeEecC
Confidence 467889888 55667899999999999999998744322111 22344554 468887644
No 248
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=46.77 E-value=65 Score=30.27 Aligned_cols=81 Identities=15% Similarity=0.086 Sum_probs=47.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhcc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~ 151 (282)
.+|++|.+|+. .|+ +.-.++..+...|.+|.+.+-++=...+++...+.+...+.|..+......+ +...++
T Consensus 177 l~glkva~vGD-~~n-----va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~--eav~~a 248 (340)
T 4ep1_A 177 FKGIKLAYVGD-GNN-----VCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPE--LAVNEA 248 (340)
T ss_dssp CTTCEEEEESC-CCH-----HHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHH--HHHTTC
T ss_pred CCCCEEEEECC-Cch-----hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHH--HHhCCC
Confidence 68999999985 444 4445555555559999998833222234443333333445675543211111 246789
Q ss_pred CEEEEechh
Q 023401 152 DLIVLNTAV 160 (282)
Q Consensus 152 DLVIaNT~v 160 (282)
|.|+.-+..
T Consensus 249 DVvyt~~w~ 257 (340)
T 4ep1_A 249 DFIYTDVWM 257 (340)
T ss_dssp SEEEECCC-
T ss_pred CEEEecCcc
Confidence 999997764
No 249
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=46.76 E-value=26 Score=31.91 Aligned_cols=39 Identities=23% Similarity=0.384 Sum_probs=31.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
-++||++|+| .|.=.||+ -+.+.++.|++.|...+....
T Consensus 200 dv~gk~vliV-DDii~TG~--Tl~~a~~~L~~~Ga~~v~~~~ 238 (286)
T 3lrt_A 200 DVNGKKLLIV-DDIISTGG--TIAKSSGLLREKGASKIYVSA 238 (286)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCcCEEEEE-eccccccH--HHHHHHHHHHhCCCCEEEEEE
Confidence 3699998888 67778888 578999999999998665554
No 250
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=46.71 E-value=45 Score=31.26 Aligned_cols=80 Identities=19% Similarity=0.264 Sum_probs=54.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhC---CCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh----
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV---GTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE---- 143 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~---G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~k~~~---- 143 (282)
.|++++| |+-..-+|+|..|++. |.+|.++..... ..+.++...+.+.+.++||.+.....-.
T Consensus 187 ~~~vvVi-------GgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 259 (490)
T 1fec_A 187 PKRALCV-------GGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTK 259 (490)
T ss_dssp CSEEEEE-------CSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEE
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 4778887 4445778999999999 999999984432 1245666677888888899887542111
Q ss_pred ------HHHH----hhccCEEEEechh
Q 023401 144 ------TINT----ALKADLIVLNTAV 160 (282)
Q Consensus 144 ------~i~~----a~~~DLVIaNT~v 160 (282)
.+.+ ...+|.||..|-.
T Consensus 260 ~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 260 NADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred cCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 1111 2358999887754
No 251
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=46.54 E-value=53 Score=24.79 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=45.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHH--h
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT--A 148 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~~--a 148 (282)
++++|++++- +. +=..+|+.|.+.|++|.++-.. + + -.+++.+.|+.++.- .....+.. .
T Consensus 5 ~~~~v~I~G~--G~-----iG~~la~~L~~~g~~V~~id~~-~----~----~~~~~~~~~~~~~~gd~~~~~~l~~~~~ 68 (141)
T 3llv_A 5 GRYEYIVIGS--EA-----AGVGLVRELTAAGKKVLAVDKS-K----E----KIELLEDEGFDAVIADPTDESFYRSLDL 68 (141)
T ss_dssp -CCSEEEECC--SH-----HHHHHHHHHHHTTCCEEEEESC-H----H----HHHHHHHTTCEEEECCTTCHHHHHHSCC
T ss_pred CCCEEEEECC--CH-----HHHHHHHHHHHCCCeEEEEECC-H----H----HHHHHHHCCCcEEECCCCCHHHHHhCCc
Confidence 3567888872 33 4457889999999999887632 2 1 134566678776632 33334443 3
Q ss_pred hccCEEEEech
Q 023401 149 LKADLIVLNTA 159 (282)
Q Consensus 149 ~~~DLVIaNT~ 159 (282)
.++|.||+.|-
T Consensus 69 ~~~d~vi~~~~ 79 (141)
T 3llv_A 69 EGVSAVLITGS 79 (141)
T ss_dssp TTCSEEEECCS
T ss_pred ccCCEEEEecC
Confidence 57999998775
No 252
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=46.43 E-value=85 Score=25.54 Aligned_cols=74 Identities=19% Similarity=0.168 Sum_probs=42.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH--cCCcee--ehhchhHHHH
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQVI--SAKGQETINT 147 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~--rgI~v~--~~k~~~~i~~ 147 (282)
|++|+||+..- +| -+=.++++.|.+.|++|.++... .+ .++ ++.+ .++.++ +-...++++.
T Consensus 5 ~~~~~vlVTGa----sg--giG~~~a~~l~~~G~~V~~~~r~-~~-------~~~-~~~~~~~~~~~~~~D~~~~~~~~~ 69 (244)
T 1cyd_A 5 FSGLRALVTGA----GK--GIGRDTVKALHASGAKVVAVTRT-NS-------DLV-SLAKECPGIEPVCVDLGDWDATEK 69 (244)
T ss_dssp CTTCEEEEEST----TS--HHHHHHHHHHHHTTCEEEEEESC-HH-------HHH-HHHHHSTTCEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeCC----Cc--hHHHHHHHHHHHCCCEEEEEeCC-HH-------HHH-HHHHhccCCCcEEecCCCHHHHHH
Confidence 57787766432 22 25568899999999998877632 21 112 2222 244444 2233334442
Q ss_pred ----hhccCEEEEechh
Q 023401 148 ----ALKADLIVLNTAV 160 (282)
Q Consensus 148 ----a~~~DLVIaNT~v 160 (282)
...+|.||.|...
T Consensus 70 ~~~~~~~id~vi~~Ag~ 86 (244)
T 1cyd_A 70 ALGGIGPVDLLVNNAAL 86 (244)
T ss_dssp HHTTCCCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 2347999988764
No 253
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=46.42 E-value=53 Score=27.82 Aligned_cols=65 Identities=18% Similarity=0.131 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH--------HhhccCEEEEech
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN--------TALKADLIVLNTA 159 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~--------~a~~~DLVIaNT~ 159 (282)
+=.++|+.|.+.|++|+++..+..+ -...+.+++.+.|..+. +-....+++ .....|.+|.|..
T Consensus 16 IG~aia~~l~~~G~~vv~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 91 (258)
T 3oid_A 16 VGKAAAIRLAENGYNIVINYARSKK----AALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAA 91 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5568899999999999987544332 11223444544444433 112222222 2346899999975
Q ss_pred h
Q 023401 160 V 160 (282)
Q Consensus 160 v 160 (282)
+
T Consensus 92 ~ 92 (258)
T 3oid_A 92 S 92 (258)
T ss_dssp C
T ss_pred C
Confidence 3
No 254
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=46.34 E-value=85 Score=27.08 Aligned_cols=41 Identities=12% Similarity=-0.011 Sum_probs=24.5
Q ss_pred ccccEEEEEeccCCC-CCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSL-SGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~-TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|..++|-+|..+.+. .--.-++-.+-..+++.|+++.+...
T Consensus 1 ~~~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~ 42 (350)
T 3h75_A 1 MSLTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYA 42 (350)
T ss_dssp --CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 455678888877644 22233444555677777888877753
No 255
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=46.25 E-value=14 Score=33.44 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=27.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++||+||+|+ |+ -+-...++.|.+.|++|.|+..
T Consensus 11 l~~k~VLVVG------gG-~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 11 LKDKRILLIG------GG-EVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp CTTCEEEEEE------ES-HHHHHHHHHHGGGTCEEEEEEE
T ss_pred cCCCEEEEEC------Cc-HHHHHHHHHHHhCCCEEEEEcC
Confidence 3688888883 33 3777889999999999999984
No 256
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=46.18 E-value=17 Score=29.59 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=27.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCC-Ce
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TK 106 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G-~~ 106 (282)
.+||+||+| .|.-.||+ -|.++++.|++.| ..
T Consensus 96 ~~gk~VllV-DDvitTG~--Tl~~a~~~L~~~G~a~ 128 (181)
T 1a3c_A 96 ITDQKVILV-DDVLYTGR--TVRAGMDALVDVGRPS 128 (181)
T ss_dssp CTTSEEEEE-EEEESSSH--HHHHHHHHHHHHCCCS
T ss_pred CCCCEEEEE-eCccCcHH--HHHHHHHHHHhcCCCc
Confidence 689998887 78888999 6778999999997 54
No 257
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=46.09 E-value=27 Score=27.77 Aligned_cols=78 Identities=14% Similarity=0.092 Sum_probs=39.1
Q ss_pred ccccEEEEE-eccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHH
Q 023401 72 MKSKLVLLV-SHELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT 147 (282)
Q Consensus 72 ~~~KkILLI-SHELs~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~~ 147 (282)
|+.|+|||| +|+.-|+ |+. =-+++.+. |..+.+-+ |-.+. .+-+.-.+-+.++||.+-.. +..... .
T Consensus 1 M~~~~VLFVC~gN~cRS--pmA-Eai~~~~~--~~~~~v~SAGt~~~---~~~p~a~~~l~~~Gid~s~~~sr~l~~~-~ 71 (139)
T 1jl3_A 1 MENKIIYFLCTGNSCRS--QMA-EGWAKQYL--GDEWKVYSAGIEAH---GLNPNAVKAMKEVGIDISNQTSDIIDSD-I 71 (139)
T ss_dssp --CEEEEEEESSSSSHH--HHH-HHHHHHHS--CTTEEEEEEESSCC---CCCHHHHHHHHHTTCCCTTCCCCBCCHH-H
T ss_pred CCCCeEEEEcCCchHHH--HHH-HHHHHHhC--CCCEEEEcCcCCCC---CCCHHHHHHHHHcCCCcccCccCcCCHH-H
Confidence 445689999 4555444 221 11223332 33344444 22221 23334456677789987532 222222 2
Q ss_pred hhccCEEEEec
Q 023401 148 ALKADLIVLNT 158 (282)
Q Consensus 148 a~~~DLVIaNT 158 (282)
...||+||+=+
T Consensus 72 ~~~~D~Ii~m~ 82 (139)
T 1jl3_A 72 LNNADLVVTLC 82 (139)
T ss_dssp HTTCSEEEECS
T ss_pred hhcCCEEEEeC
Confidence 57899999754
No 258
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=45.87 E-value=1.4e+02 Score=25.34 Aligned_cols=81 Identities=20% Similarity=0.127 Sum_probs=44.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN 146 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~ 146 (282)
-++||++|+.. -+| =+=.++|+.|.+.|++|.++..+.. .....+.+++.+.|.++. +-...+.+.
T Consensus 26 ~~~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (283)
T 1g0o_A 26 SLEGKVALVTG----AGR--GIGREMAMELGRRGCKVIVNYANST----ESAEEVVAAIKKNGSDAACVKANVGVVEDIV 95 (283)
T ss_dssp CCTTCEEEETT----TTS--HHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCCCEEEEeC----CCc--HHHHHHHHHHHHCCCEEEEEeCCch----HHHHHHHHHHHHhCCCeEEEEcCCCCHHHHH
Confidence 36788765532 222 2557899999999999887764321 111122344444453332 112222222
Q ss_pred --------HhhccCEEEEechhc
Q 023401 147 --------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 --------~a~~~DLVIaNT~v~ 161 (282)
....+|.+|.|..+.
T Consensus 96 ~~~~~~~~~~g~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 96 RMFEEAVKIFGKLDIVCSNSGVV 118 (283)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 234689999998653
No 259
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=45.43 E-value=1.1e+02 Score=26.12 Aligned_cols=94 Identities=14% Similarity=0.030 Sum_probs=52.6
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCc-ee-ehhchhHHHHhhccCE
Q 023401 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ-VI-SAKGQETINTALKADL 153 (282)
Q Consensus 76 kILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~-v~-~~k~~~~i~~a~~~DL 153 (282)
.|+++..-+...+..-.+++.+..|++ +..+.++.+.+. . ..+++.+.+.|++ |. .....+.......+|+
T Consensus 185 ~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~----~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~ 257 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--Q----QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV 257 (364)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--H----HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE
T ss_pred EEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--H----HHHHHHHhhcCCCceEEecchhhHHHHHHhCCE
Confidence 355565566556666778899988887 555445554432 1 2456666665542 22 1111222346778999
Q ss_pred EEEechhchHHHHHHhhccCCCCCCceEEE
Q 023401 154 IVLNTAVAGKWLDAVLKEDVPRVLPNVLWW 183 (282)
Q Consensus 154 VIaNT~v~g~wl~~l~~~~~~~~~~pVIWW 183 (282)
+|..+- ....++++. ... |||.-
T Consensus 258 ~v~~sg-~~~~~EAma-~G~-----Pvi~~ 280 (364)
T 1f0k_A 258 VVCRSG-ALTVSEIAA-AGL-----PALFV 280 (364)
T ss_dssp EEECCC-HHHHHHHHH-HTC-----CEEEC
T ss_pred EEECCc-hHHHHHHHH-hCC-----CEEEe
Confidence 999774 344455442 333 66653
No 260
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=45.33 E-value=72 Score=22.61 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=39.9
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-Hhh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TAL 149 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G-~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a~ 149 (282)
+++|++++= +. +=..+++.|.+.| ++|.++. +.++ -.+++...|+..+.. .....+. ...
T Consensus 5 ~~~v~I~G~--G~-----iG~~~~~~l~~~g~~~v~~~~-r~~~--------~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GK-----IGQMIAALLKTSSNYSVTVAD-HDLA--------ALAVLNRMGVATKQVDAKDEAGLAKALG 68 (118)
T ss_dssp CEEEEEECC--SH-----HHHHHHHHHHHCSSEEEEEEE-SCHH--------HHHHHHTTTCEEEECCTTCHHHHHHHTT
T ss_pred cCeEEEECC--CH-----HHHHHHHHHHhCCCceEEEEe-CCHH--------HHHHHHhCCCcEEEecCCCHHHHHHHHc
Confidence 467887742 33 3346778888889 7776655 3221 123344456655422 2223343 456
Q ss_pred ccCEEEEech
Q 023401 150 KADLIVLNTA 159 (282)
Q Consensus 150 ~~DLVIaNT~ 159 (282)
.+|.||.++-
T Consensus 69 ~~d~vi~~~~ 78 (118)
T 3ic5_A 69 GFDAVISAAP 78 (118)
T ss_dssp TCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 7999998874
No 261
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=45.27 E-value=82 Score=26.28 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=42.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
|+||++|+.. -+| -+=.++++.|.+.|++|.++... .+ . .+.+++.+.|.++. +-....+++
T Consensus 2 l~~k~vlVTG----as~--giG~~ia~~l~~~G~~V~~~~r~-~~--~----~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 68 (255)
T 2q2v_A 2 LKGKTALVTG----STS--GIGLGIAQVLARAGANIVLNGFG-DP--A----PALAEIARHGVKAVHHPADLSDVAQIEA 68 (255)
T ss_dssp CTTCEEEESS----CSS--HHHHHHHHHHHHTTCEEEEECSS-CC--H----HHHHHHHTTSCCEEEECCCTTSHHHHHH
T ss_pred CCCCEEEEeC----CCc--HHHHHHHHHHHHCCCEEEEEeCC-ch--H----HHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 4677665431 222 35568999999999998776532 31 1 23445544443332 112223332
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
....+|.+|.|..+
T Consensus 69 ~~~~~~~~~g~id~lv~~Ag~ 89 (255)
T 2q2v_A 69 LFALAEREFGGVDILVNNAGI 89 (255)
T ss_dssp HHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 12379999999764
No 262
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=45.21 E-value=1.3e+02 Score=24.88 Aligned_cols=40 Identities=15% Similarity=0.001 Sum_probs=24.1
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++++|-+|..+++..--.-++-.+-..+++.|+++.+...
T Consensus 7 ~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 46 (291)
T 3egc_A 7 RSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANT 46 (291)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4566777766654332233455556677777887776653
No 263
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=45.11 E-value=51 Score=28.38 Aligned_cols=57 Identities=12% Similarity=0.189 Sum_probs=39.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceeeh
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISA 139 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll-~rgI~v~~~ 139 (282)
.+|+|++| |+-..-+|+|..|.+.|.+|.++......... ..+.++++ ++||++...
T Consensus 154 ~~~~v~Vi-------G~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~---~~~~~~~~~~~gV~v~~~ 211 (335)
T 2a87_A 154 RDQDIAVI-------GGGDSAMEEATFLTRFARSVTLVHRRDEFRAS---KIMLDRARNNDKIRFLTN 211 (335)
T ss_dssp TTCEEEEE-------CSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC---TTHHHHHHHCTTEEEECS
T ss_pred CCCEEEEE-------CCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc---HHHHHHHhccCCcEEEeC
Confidence 57889888 44457889999999999999998744322111 12455554 478888754
No 264
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=45.01 E-value=97 Score=25.71 Aligned_cols=39 Identities=8% Similarity=-0.111 Sum_probs=23.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
++++|-+|..+.+..--.-++-.+...+++.|+++.++.
T Consensus 3 ~~~~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 41 (303)
T 3d02_A 3 AEKTVVNISKVDGMPWFNRMGEGVVQAGKEFNLNASQVG 41 (303)
T ss_dssp -CEEEEEECSCSSCHHHHHHHHHHHHHHHHTTEEEEEEC
T ss_pred CceEEEEEeccCCChHHHHHHHHHHHHHHHcCCEEEEEC
Confidence 456777777665432222334455567788888877654
No 265
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=45.01 E-value=33 Score=31.49 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=23.6
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|+||+++ |+++ -..+++.+++.|++++++..
T Consensus 3 k~ilI~g------~g~~-~~~~~~a~~~~G~~vv~v~~ 33 (451)
T 1ulz_A 3 NKVLVAN------RGEI-AVRIIRACKELGIPTVAIYN 33 (451)
T ss_dssp SSEEECC------CHHH-HHHHHHHHHHHTCCEEEEEC
T ss_pred ceEEEEC------CcHH-HHHHHHHHHHcCCeEEEEec
Confidence 5688875 3454 45689999999999998874
No 266
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=44.73 E-value=38 Score=26.95 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=29.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
++--+++||+ +|-.--+.++++..|+.|..++.+++..+
T Consensus 110 ~~Dvvi~iS~----sG~t~~~~~~~~~ak~~g~~vi~iT~~~~ 148 (188)
T 1tk9_A 110 EKDVLIGIST----SGKSPNVLEALKKAKELNMLCLGLSGKGG 148 (188)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3455666665 56666778999999999999999996544
No 267
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=44.61 E-value=85 Score=27.21 Aligned_cols=79 Identities=6% Similarity=0.105 Sum_probs=45.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||++|+.. -+| =+=.++|+.|.+.|++|+++..+ .+ -...+.+++...|..+. +-....+++
T Consensus 29 l~gk~vlVTG----as~--gIG~~la~~l~~~G~~V~~~~r~-~~----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 97 (301)
T 3tjr_A 29 FDGRAAVVTG----GAS--GIGLATATEFARRGARLVLSDVD-QP----ALEQAVNGLRGQGFDAHGVVCDVRHLDEMVR 97 (301)
T ss_dssp STTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESC-HH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred cCCCEEEEeC----CCC--HHHHHHHHHHHHCCCEEEEEECC-HH----HHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 5678766642 223 36678999999999998776633 21 11233445555554432 112222332
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
....+|.+|.|..+.
T Consensus 98 ~~~~~~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 98 LADEAFRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHhCCCCCEEEECCCcC
Confidence 224799999997753
No 268
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=44.56 E-value=21 Score=28.24 Aligned_cols=71 Identities=21% Similarity=0.161 Sum_probs=44.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
+|++|.++-.|-- ..+-+......|+..|+++.++...+|+ +. -..|+.+..+.....++ ..++|
T Consensus 1 ~~~ki~il~~~g~---~~~e~~~~~~~l~~ag~~v~~vs~~~~~----v~-------~~~g~~i~~~~~~~~~~-~~~~D 65 (168)
T 3l18_A 1 ASMKVLFLSADGF---EDLELIYPLHRIKEEGHEVYVASFQRGK----IT-------GKHGYSVNVDLTFEEVD-PDEFD 65 (168)
T ss_dssp CCCEEEEECCTTB---CHHHHHHHHHHHHHTTCEEEEEESSSEE----EE-------CTTSCEEEECEEGGGCC-GGGCS
T ss_pred CCcEEEEEeCCCc---cHHHHHHHHHHHHHCCCEEEEEECCCCE----Ee-------cCCCcEEeccCChhHCC-HhhCC
Confidence 4678877765521 2344556667888999999999865542 21 13477776664443332 35799
Q ss_pred EEEEec
Q 023401 153 LIVLNT 158 (282)
Q Consensus 153 LVIaNT 158 (282)
.||+=-
T Consensus 66 ~livpG 71 (168)
T 3l18_A 66 ALVLPG 71 (168)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 998743
No 269
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=44.37 E-value=19 Score=29.48 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=25.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCC
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG 104 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G 104 (282)
++||+||+| .|.-.||+ -|.+.++.|++.|
T Consensus 94 ~~gk~VllV-DDvitTG~--Tl~~a~~~L~~~G 123 (181)
T 1ufr_A 94 LTGKAIVLV-DDVLYTGR--TARAALDALIDLG 123 (181)
T ss_dssp CTTCEEEEE-EEEESSSH--HHHHHHHHHHHHC
T ss_pred CCCCEEEEE-ecCCCcHH--HHHHHHHHHHhcC
Confidence 589988887 78888999 6778999999998
No 270
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=44.32 E-value=56 Score=27.14 Aligned_cols=80 Identities=19% Similarity=0.197 Sum_probs=43.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
|+||++|+ + +-+| =+=.++|+.|.+.|++|.++..+..+ .. ..+.+++.+.|..+. +-....+++
T Consensus 2 l~~k~vlV-T---Gas~--giG~~ia~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (246)
T 2uvd_A 2 LKGKVALV-T---GASR--GIGRAIAIDLAKQGANVVVNYAGNEQ---KA-NEVVDEIKKLGSDAIAVRADVANAEDVTN 71 (246)
T ss_dssp CTTCEEEE-T---TCSS--HHHHHHHHHHHHTTCEEEEEESSCHH---HH-HHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEE-E---CCCc--HHHHHHHHHHHHCCCEEEEEeCCCHH---HH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 46776554 3 2222 25568899999999998887642221 11 122344444443322 112222332
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
....+|.+|.|..+.
T Consensus 72 ~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 72 MVKQTVDVFGQVDILVNNAGVT 93 (246)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 123699999987653
No 271
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=44.24 E-value=84 Score=25.23 Aligned_cols=74 Identities=16% Similarity=0.080 Sum_probs=43.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k~~~~i~- 146 (282)
+++|+||++. -||. +=.++++.|.+. |++|..+..+.. .+ +++ ..++..+. -....++.
T Consensus 2 ~~~~~ilVtG----asG~--iG~~l~~~l~~~~~g~~V~~~~r~~~--------~~-~~~-~~~~~~~~~D~~d~~~~~~ 65 (253)
T 1xq6_A 2 ANLPTVLVTG----ASGR--TGQIVYKKLKEGSDKFVAKGLVRSAQ--------GK-EKI-GGEADVFIGDITDADSINP 65 (253)
T ss_dssp CSCCEEEEES----TTSH--HHHHHHHHHHHTTTTCEEEEEESCHH--------HH-HHT-TCCTTEEECCTTSHHHHHH
T ss_pred CCCCEEEEEc----CCcH--HHHHHHHHHHhcCCCcEEEEEEcCCC--------ch-hhc-CCCeeEEEecCCCHHHHHH
Confidence 3567776653 2333 556888999998 899988874311 11 111 23444442 12334454
Q ss_pred HhhccCEEEEechhc
Q 023401 147 TALKADLIVLNTAVA 161 (282)
Q Consensus 147 ~a~~~DLVIaNT~v~ 161 (282)
...++|.||.|....
T Consensus 66 ~~~~~d~vi~~a~~~ 80 (253)
T 1xq6_A 66 AFQGIDALVILTSAV 80 (253)
T ss_dssp HHTTCSEEEECCCCC
T ss_pred HHcCCCEEEEecccc
Confidence 456799999887643
No 272
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1
Probab=44.05 E-value=63 Score=29.40 Aligned_cols=82 Identities=10% Similarity=-0.027 Sum_probs=47.3
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC----Cceeeh-----------
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG----VQVISA----------- 139 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rg----I~v~~~----------- 139 (282)
|+|++|..+++ .--.=++ |++.|++.|.+|++.+.. +|.-+++ ..+.+...| ..++..
T Consensus 165 ~~v~~v~DNaG--Eiv~Dll-l~~~Ll~~g~~V~~~vK~-~P~vnDv---T~~D~~~~~l~~~~~vi~~~G~~~~~~~l~ 237 (300)
T 2ffj_A 165 GKVVYLTDNAG--EIFFDTL-LMKEIKRRCEKLTAVVRG-RPIISDA---TIEDARLARVDKIADELLTNGKGAIGIIMD 237 (300)
T ss_dssp SEEEEECCBTT--HHHHHHH-HHHHHHTTCSEEEEEEBS-SCCTTBC---BHHHHHHTTHHHHSSEEEECSSCCSSCCGG
T ss_pred CCEEEEecCCc--cHHHHHH-HHHHHHHcCCeEEEEECC-cCceecC---CHHHHHHhhhhHHHhhhcCCCCCCCCcChH
Confidence 78999977655 3322234 899999999998876654 4443333 333333222 122222
Q ss_pred hchhHH-HHhhccCEEEEechhchH
Q 023401 140 KGQETI-NTALKADLIVLNTAVAGK 163 (282)
Q Consensus 140 k~~~~i-~~a~~~DLVIaNT~v~g~ 163 (282)
.-...+ +...++||||+=--..++
T Consensus 238 ~~s~el~~~l~~adLVI~KG~~Nyr 262 (300)
T 2ffj_A 238 ELPDETRKALEEADLIVAKGMANYE 262 (300)
T ss_dssp GCCHHHHHHHHHCSEEEEESHHHHH
T ss_pred hCCHHHHHHHccCCEEEEECChHHH
Confidence 111122 356789999987765544
No 273
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=43.99 E-value=1.1e+02 Score=25.02 Aligned_cols=75 Identities=20% Similarity=0.233 Sum_probs=42.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCcee--ehhchhHHHHh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVI--SAKGQETINTA 148 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~--~~k~~~~i~~a 148 (282)
++||+||+.. -+| -+=.++++.|.+.|++|.++... .+ .+++...+ .++.++ +-....+++.+
T Consensus 5 l~~k~vlITG----asg--giG~~~a~~l~~~G~~V~~~~r~-~~-------~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 70 (244)
T 3d3w_A 5 LAGRRVLVTG----AGK--GIGRGTVQALHATGARVVAVSRT-QA-------DLDSLVRECPGIEPVCVDLGDWEATERA 70 (244)
T ss_dssp CTTCEEEEES----TTS--HHHHHHHHHHHHTTCEEEEEESC-HH-------HHHHHHHHSTTCEEEECCTTCHHHHHHH
T ss_pred cCCcEEEEEC----CCc--HHHHHHHHHHHHCCCEEEEEeCC-HH-------HHHHHHHHcCCCCEEEEeCCCHHHHHHH
Confidence 4677766542 223 36678899999999998777632 21 11211111 144444 22333344422
Q ss_pred ----hccCEEEEechh
Q 023401 149 ----LKADLIVLNTAV 160 (282)
Q Consensus 149 ----~~~DLVIaNT~v 160 (282)
..+|.||.|...
T Consensus 71 ~~~~~~id~vi~~Ag~ 86 (244)
T 3d3w_A 71 LGSVGPVDLLVNNAAV 86 (244)
T ss_dssp HTTCCCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCcc
Confidence 358999998764
No 274
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=43.87 E-value=81 Score=26.20 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=25.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
.-+++|+||+.. -+|+ +=.++++.|.+.|++|+++.
T Consensus 12 ~~l~~k~vlITG----asgg--iG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 12 NRLQDKVAIITG----GAGG--IGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CTTTTCEEEEES----TTSH--HHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCEEEEEC----CCCH--HHHHHHHHHHHCCCEEEEEc
Confidence 346888777654 2332 55688999999999988875
No 275
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=43.73 E-value=39 Score=32.59 Aligned_cols=59 Identities=17% Similarity=0.187 Sum_probs=40.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEE---EeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNW---ITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~v---L~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.+.+||+||+| .|.=.||+ -+.+.++.|++.|.+++- +..+ +. +=.+++.+.|+++..-
T Consensus 361 ~~~~G~~VliV-DDvitTG~--T~~~~~~~l~~~g~~vv~v~~lvdr-~~-------~g~~~l~~~g~~v~sL 422 (453)
T 3qw4_B 361 EYKKGDRVVII-DDLVSTGE--TKVEAIEKLRSAGLEVVSIVVLVDR-DM-------GAKAFLNKLGYDFEAV 422 (453)
T ss_dssp CCCTTCEEEEE-EEEECC-C--CHHHHHHHHHTTTCEEEEEEEEEEC-SS-------SHHHHHHHTTCCEEEE
T ss_pred ccCCCCEEEEE-eeeechhH--HHHHHHHHHHHcCCEEEEEEEEEEC-Cc-------chHHHHHhcCCCEEEE
Confidence 35789999888 56667777 468899999999998643 3333 21 1135677789988744
No 276
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=43.57 E-value=74 Score=27.14 Aligned_cols=80 Identities=13% Similarity=0.164 Sum_probs=45.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||.+|+.. |+-=+=.++|+.|.+.|+.|.++..+..+ -...+.+++.+.|..+. +-....+++
T Consensus 26 l~~k~vlVTG------as~gIG~aia~~la~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~ 95 (269)
T 4dmm_A 26 LTDRIALVTG------ASRGIGRAIALELAAAGAKVAVNYASSAG----AADEVVAAIAAAGGEAFAVKADVSQESEVEA 95 (269)
T ss_dssp TTTCEEEETT------CSSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEeCCChH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4677665521 22335578999999999999887753321 11233445555444433 112222222
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
.....|.+|.|..+.
T Consensus 96 ~~~~~~~~~g~id~lv~nAg~~ 117 (269)
T 4dmm_A 96 LFAAVIERWGRLDVLVNNAGIT 117 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 234799999997654
No 277
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=43.34 E-value=60 Score=26.81 Aligned_cols=80 Identities=18% Similarity=0.113 Sum_probs=43.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
+++|+||+.. -+| -+=.++++.|.+.|++|.++.....+ -...+.+++.+.+..+. +-.....+.
T Consensus 5 l~~k~vlITG----asg--giG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 74 (261)
T 1gee_A 5 LEGKVVVITG----SST--GLGKSMAIRFATEKAKVVVNYRSKED----EANSVLEEIKKVGGEAIAVKGDVTVESDVIN 74 (261)
T ss_dssp GTTCEEEETT----CSS--HHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEeC----CCC--hHHHHHHHHHHHCCCEEEEEcCCChH----HHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 5677666532 222 35578999999999998877642221 11123344444443322 112222222
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
....+|.||.|..+.
T Consensus 75 ~~~~~~~~~g~id~li~~Ag~~ 96 (261)
T 1gee_A 75 LVQSAIKEFGKLDVMINNAGLE 96 (261)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 123789999997653
No 278
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=42.87 E-value=29 Score=29.19 Aligned_cols=41 Identities=24% Similarity=0.179 Sum_probs=23.4
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
++-.+|| +|+||+.+ -+| =+=.++|+.|.+.|++|.++..+
T Consensus 15 ~~~~~~m-~k~vlITG----as~--gIG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 15 VPRGSHM-SKNILVLG----GSG--ALGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp --------CCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccccccc-CCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4567788 56666542 222 25578999999999998777744
No 279
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=42.86 E-value=94 Score=25.87 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=24.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|++|++|+.. -+|+ +=.++++.|.+.|++|.++..
T Consensus 3 l~~k~vlVTG----as~g--iG~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 3 LKDKAVLITG----AAHG--IGRATLELFAKEGARLVACDI 37 (245)
T ss_dssp TTTCEEEEES----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 4677666543 2232 556788999999999888763
No 280
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=42.79 E-value=45 Score=26.75 Aligned_cols=40 Identities=13% Similarity=0.046 Sum_probs=30.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS 116 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~ 116 (282)
++--+++||+ +|-.--..++++..|+.|..++.+++..+.
T Consensus 116 ~~d~vI~iS~----SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s 155 (198)
T 2xbl_A 116 EGDVLIGYST----SGKSPNILAAFREAKAKGMTCVGFTGNRGG 155 (198)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 3455666766 455567789999999999999999976553
No 281
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=42.74 E-value=1.5e+02 Score=24.76 Aligned_cols=39 Identities=10% Similarity=-0.098 Sum_probs=24.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
++++|-+|..+.+..--.-++-.+...+++.|+++.+..
T Consensus 15 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 53 (289)
T 2fep_A 15 KTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSN 53 (289)
T ss_dssp -CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence 456677777665433233355566678888999887765
No 282
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=42.65 E-value=1.3e+02 Score=25.65 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=45.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||++|+.. |+-=+=.++|+.|.+.|+.|.++..+..+ -...+.+++.+.|..+. +-...++++
T Consensus 29 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 98 (271)
T 3v2g_A 29 LAGKTAFVTG------GSRGIGAAIAKRLALEGAAVALTYVNAAE----RAQAVVSEIEQAGGRAVAIRADNRDAEAIEQ 98 (271)
T ss_dssp CTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC------CCcHHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4677666542 22235568999999999998887644321 11233455555554433 112222222
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
.....|.+|.|..+
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~ 119 (271)
T 3v2g_A 99 AIRETVEALGGLDILVNSAGI 119 (271)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCcEEEECCCC
Confidence 23379999998765
No 283
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=42.49 E-value=1e+02 Score=25.83 Aligned_cols=80 Identities=11% Similarity=0.184 Sum_probs=44.5
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC-chhhhhhhHHHHHHcCCceeeh--hchhHHH-Hhh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE-EDEVIYSLEHKMWDRGVQVISA--KGQETIN-TAL 149 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a~ 149 (282)
.|+||+++ -||. +=-++++.|.+.|++|.++....... ..+- ....+.+...|+.++.. ....++. ...
T Consensus 4 ~~~ilVtG----atG~--iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~ 76 (308)
T 1qyc_A 4 RSRILLIG----ATGY--IGRHVAKASLDLGHPTFLLVRESTASSNSEK-AQLLESFKASGANIVHGSIDDHASLVEAVK 76 (308)
T ss_dssp CCCEEEES----TTST--THHHHHHHHHHTTCCEEEECCCCCTTTTHHH-HHHHHHHHTTTCEEECCCTTCHHHHHHHHH
T ss_pred CCEEEEEc----CCcH--HHHHHHHHHHhCCCCEEEEECCcccccCHHH-HHHHHHHHhCCCEEEEeccCCHHHHHHHHc
Confidence 35666654 2332 33467788888999998877442211 0111 01112344567777632 2334454 456
Q ss_pred ccCEEEEechh
Q 023401 150 KADLIVLNTAV 160 (282)
Q Consensus 150 ~~DLVIaNT~v 160 (282)
.+|.||.++..
T Consensus 77 ~~d~vi~~a~~ 87 (308)
T 1qyc_A 77 NVDVVISTVGS 87 (308)
T ss_dssp TCSEEEECCCG
T ss_pred CCCEEEECCcc
Confidence 79999988754
No 284
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=42.33 E-value=38 Score=30.25 Aligned_cols=36 Identities=22% Similarity=0.173 Sum_probs=28.2
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 76 kILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+||+++.- ..|==.-++.||+.|++.|++|.+++..
T Consensus 2 rIl~~~~~--~~GH~~p~l~la~~L~~~Gh~V~~~~~~ 37 (416)
T 1rrv_A 2 RVLLSVCG--TRGDVEIGVALADRLKALGVQTRMCAPP 37 (416)
T ss_dssp EEEEEEES--CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred eEEEEecC--CCccHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 57787643 3465667889999999999999999843
No 285
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=42.25 E-value=62 Score=29.36 Aligned_cols=68 Identities=15% Similarity=0.069 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeccCCCCch-hhhhhhHHHHHHcCCceeehh---chhHHH--HhhccCEEEEe
Q 023401 90 PLLLMELAFLLRGVGTKVNWITIQKPSEED-EVIYSLEHKMWDRGVQVISAK---GQETIN--TALKADLIVLN 157 (282)
Q Consensus 90 PLlLleLA~~Lkq~G~~V~vL~~~~G~~~~-~v~~~L~~kll~rgI~v~~~k---~~~~i~--~a~~~DLVIaN 157 (282)
|=+-..-.+.|.+.|++|+.+..+.....+ ....+..+..++.||+++.-. ..+.++ ...++|+||+-
T Consensus 9 ~~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~ 82 (305)
T 2bln_A 9 HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSF 82 (305)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEEEEE
T ss_pred CHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcCCcHHHHHHHHhcCCCEEEEe
Confidence 333344455556669999887765332111 112346778888899998432 222222 35689999863
No 286
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=42.24 E-value=72 Score=27.38 Aligned_cols=79 Identities=14% Similarity=0.144 Sum_probs=43.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHH--
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETI-- 145 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~---~-k~~~~i-- 145 (282)
+++|.+|+.. |+.=+=.++|+.|.+.|++|.++..+..+ -...+.+++...|.++.. | ...+++
T Consensus 27 ~~~k~~lVTG------as~GIG~aia~~la~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 96 (280)
T 4da9_A 27 KARPVAIVTG------GRRGIGLGIARALAASGFDIAITGIGDAE----GVAPVIAELSGLGARVIFLRADLADLSSHQA 96 (280)
T ss_dssp CCCCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESCCHH----HHHHHHHHHHHTTCCEEEEECCTTSGGGHHH
T ss_pred cCCCEEEEec------CCCHHHHHHHHHHHHCCCeEEEEeCCCHH----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 4567665532 22235568899999999999888743331 112234455554543321 1 222222
Q ss_pred --H----HhhccCEEEEechh
Q 023401 146 --N----TALKADLIVLNTAV 160 (282)
Q Consensus 146 --~----~a~~~DLVIaNT~v 160 (282)
+ .....|.+|.|..+
T Consensus 97 ~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 97 TVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHHHHSCCCEEEEECC-
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 2 23479999999876
No 287
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=42.19 E-value=67 Score=27.84 Aligned_cols=80 Identities=18% Similarity=0.197 Sum_probs=45.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceee-h-hchhHHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVIS-A-KGQETIN 146 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll-~rgI~v~~-~-k~~~~i~ 146 (282)
++|++|+||+.+ -||. +=-++++.|.+.|++|..+...... .... .+.+. ..++..+. | ....++.
T Consensus 5 ~~~~~~~vlVtG----atG~--iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~ 73 (357)
T 1rkx_A 5 SFWQGKRVFVTG----HTGF--KGGWLSLWLQTMGATVKGYSLTAPT-VPSL----FETARVADGMQSEIGDIRDQNKLL 73 (357)
T ss_dssp HHHTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESSCSS-SSCH----HHHTTTTTTSEEEECCTTCHHHHH
T ss_pred hhhCCCEEEEEC----CCch--HHHHHHHHHHhCCCeEEEEeCCCcc-cchh----hHhhccCCceEEEEccccCHHHHH
Confidence 568888887652 2333 5567888899999999988754332 1111 11111 12444332 1 2233444
Q ss_pred H-hh--ccCEEEEechh
Q 023401 147 T-AL--KADLIVLNTAV 160 (282)
Q Consensus 147 ~-a~--~~DLVIaNT~v 160 (282)
. .. ++|.||-|...
T Consensus 74 ~~~~~~~~d~vih~A~~ 90 (357)
T 1rkx_A 74 ESIREFQPEIVFHMAAQ 90 (357)
T ss_dssp HHHHHHCCSEEEECCSC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 2 22 38999988763
No 288
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=42.18 E-value=26 Score=31.46 Aligned_cols=71 Identities=13% Similarity=0.170 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhCCC----eEEEEeccC--CCCchhhhhhhHHHHHHcCCceeehhchhHHH---------HhhccCEEEE
Q 023401 92 LLMELAFLLRGVGT----KVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISAKGQETIN---------TALKADLIVL 156 (282)
Q Consensus 92 lLleLA~~Lkq~G~----~V~vL~~~~--G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~---------~a~~~DLVIa 156 (282)
+.+.++..|++.|. +|.++.... +..+.++...+++.+.++||.+.......+++ ....+|+||.
T Consensus 185 ~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~ 264 (409)
T 3h8l_A 185 MSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITIL 264 (409)
T ss_dssp HHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHcCCCCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEE
Confidence 34455688999994 788877433 11345666678888888899988653322221 1346999999
Q ss_pred echhch
Q 023401 157 NTAVAG 162 (282)
Q Consensus 157 NT~v~g 162 (282)
.|-...
T Consensus 265 a~G~~~ 270 (409)
T 3h8l_A 265 LPPYTG 270 (409)
T ss_dssp ECCEEC
T ss_pred CCCCCc
Confidence 876543
No 289
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=42.07 E-value=1.4e+02 Score=25.79 Aligned_cols=83 Identities=13% Similarity=0.122 Sum_probs=45.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH---HcCCceeeh--hchhHHH
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW---DRGVQVISA--KGQETIN 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll---~rgI~v~~~--k~~~~i~ 146 (282)
|++|+||+.. -||. +=-++++.|.+.|++|.++...... ..+-...+.+++. ..++.++.. ....++.
T Consensus 25 ~~~~~vlVtG----atG~--iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 97 (352)
T 1sb8_A 25 AQPKVWLITG----VAGF--IGSNLLETLLKLDQKVVGLDNFATG-HQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN 97 (352)
T ss_dssp HSCCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEECCSSC-CHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH
T ss_pred ccCCeEEEEC----CCcH--HHHHHHHHHHHCCCEEEEEeCCCcc-chhhHHHHhhhcccccCCceEEEECCCCCHHHHH
Confidence 5677777652 3332 5567888899999999988743321 1111111111111 134444421 2233443
Q ss_pred -HhhccCEEEEechhc
Q 023401 147 -TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -~a~~~DLVIaNT~v~ 161 (282)
...++|.||-|....
T Consensus 98 ~~~~~~d~vih~A~~~ 113 (352)
T 1sb8_A 98 NACAGVDYVLHQAALG 113 (352)
T ss_dssp HHHTTCSEEEECCSCC
T ss_pred HHhcCCCEEEECCccc
Confidence 455899999887653
No 290
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=42.06 E-value=1.5e+02 Score=24.57 Aligned_cols=40 Identities=0% Similarity=-0.195 Sum_probs=24.1
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCC-eEEEEec
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGT-KVNWITI 112 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~-~V~vL~~ 112 (282)
++++|-+|..+.+..--.-++-.+...+++.|+ ++.+...
T Consensus 1 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 41 (309)
T 2fvy_A 1 ADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDS 41 (309)
T ss_dssp -CEEEEEEESCTTSHHHHHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred CCcEEEEEeccCCcHHHHHHHHHHHHHHHhcCCeEEEEecC
Confidence 356777777665433223345556678888897 7766553
No 291
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=41.84 E-value=52 Score=32.82 Aligned_cols=63 Identities=13% Similarity=0.097 Sum_probs=44.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCc----hhhhhhhHHHHHHcCCceeehhc
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE----DEVIYSLEHKMWDRGVQVISAKG 141 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~----~~v~~~L~~kll~rgI~v~~~k~ 141 (282)
.||+|++|. .|+-..-+|+|..|++.|.+|.++.... ... +.....+.+.+.++||++.....
T Consensus 527 ~gk~VvVIG-----~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~~~~~~~~l~~~GV~i~~~~~ 593 (729)
T 1o94_A 527 IGKRVVILN-----ADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLEYPNMMRRLHELHVEELGDHF 593 (729)
T ss_dssp CCSEEEEEE-----CCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTCHHHHHHHHHHTTCEEECSEE
T ss_pred CCCeEEEEc-----CCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccccccHHHHHHHHHhCCCEEEcCcE
Confidence 578999996 3444578899999999999999998544 111 11123466777788999886643
No 292
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.77 E-value=74 Score=26.74 Aligned_cols=83 Identities=16% Similarity=0.210 Sum_probs=46.2
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhch
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQ 142 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~ 142 (282)
.+..-+++|++|+.. -+| =+=.++|+.|.+.|++|.++. +..+ -...+.+++.+.|..+. +-...
T Consensus 22 ~~m~~l~~k~vlITG----as~--gIG~~la~~l~~~G~~V~~~~-r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~ 90 (262)
T 3rkr_A 22 KHMSSLSGQVAVVTG----ASR--GIGAAIARKLGSLGARVVLTA-RDVE----KLRAVEREIVAAGGEAESHACDLSHS 90 (262)
T ss_dssp ---CTTTTCEEEESS----TTS--HHHHHHHHHHHHTTCEEEEEE-SCHH----HHHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred chhhccCCCEEEEEC----CCC--hHHHHHHHHHHHCCCEEEEEE-CCHH----HHHHHHHHHHHhCCceeEEEecCCCH
Confidence 344557888766542 222 366788999999999987765 3221 11233455555544432 11222
Q ss_pred hHHH--------HhhccCEEEEechh
Q 023401 143 ETIN--------TALKADLIVLNTAV 160 (282)
Q Consensus 143 ~~i~--------~a~~~DLVIaNT~v 160 (282)
++++ .....|.||.|..+
T Consensus 91 ~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 91 DAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 2232 23469999999876
No 293
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=41.63 E-value=84 Score=26.48 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=45.8
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETI 145 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i 145 (282)
..++||++|+..- +|+ +=.++|+.|.+.|++|.++... .+ -...+.+++.+.|..+. +-....++
T Consensus 7 ~~l~~k~vlVTGa----s~g--IG~aia~~l~~~G~~V~~~~r~-~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 75 (264)
T 3ucx_A 7 GLLTDKVVVISGV----GPA--LGTTLARRCAEQGADLVLAART-VE----RLEDVAKQVTDTGRRALSVGTDITDDAQV 75 (264)
T ss_dssp CTTTTCEEEEESC----CTT--HHHHHHHHHHHTTCEEEEEESC-HH----HHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCcCCcEEEEECC----CcH--HHHHHHHHHHHCcCEEEEEeCC-HH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence 4578887776541 222 5568899999999998776532 21 11233455555544433 11222233
Q ss_pred H--------HhhccCEEEEechh
Q 023401 146 N--------TALKADLIVLNTAV 160 (282)
Q Consensus 146 ~--------~a~~~DLVIaNT~v 160 (282)
+ .....|.+|.|...
T Consensus 76 ~~~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 76 AHLVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHHHHHHHTSCCSEEEECCCS
T ss_pred HHHHHHHHHHcCCCcEEEECCCC
Confidence 2 22478999999854
No 294
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=41.57 E-value=31 Score=22.76 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=25.8
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
|.+++.-+ .+.+ .+-+.+.+.+|+|++++-|.+
T Consensus 10 grs~e~k~----~l~~-~i~~~l~~~lg~p~~~v~v~i 42 (62)
T 1otf_A 10 GRTDEQKE----TLIR-QVSEAMANSLDAPLERVRVLI 42 (62)
T ss_dssp CCCHHHHH----HHHH-HHHHHHHHHHTCCGGGCEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHhCcCcccEEEEE
Confidence 45677666 7777 678889999999999987754
No 295
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.52 E-value=67 Score=27.08 Aligned_cols=66 Identities=12% Similarity=0.075 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hhchhHHH--------HhhccCEEEEech
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AKGQETIN--------TALKADLIVLNTA 159 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~----~k~~~~i~--------~a~~~DLVIaNT~ 159 (282)
+=.++|+.|.+.|++|.++..+..+ -...+.+++.+.+..+.. -....+++ .....|.||.|..
T Consensus 38 IG~a~a~~l~~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg 113 (272)
T 4e3z_A 38 IGAAVCRLAARQGWRVGVNYAANRE----AADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAG 113 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCChh----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 5578999999999999887654332 112334455554443331 12222222 2246899999987
Q ss_pred hc
Q 023401 160 VA 161 (282)
Q Consensus 160 v~ 161 (282)
+.
T Consensus 114 ~~ 115 (272)
T 4e3z_A 114 IV 115 (272)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 296
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=41.45 E-value=1.2e+02 Score=23.27 Aligned_cols=44 Identities=14% Similarity=0.066 Sum_probs=28.6
Q ss_pred cccEEEEEeccCCCC-Cch---HHHHHHHHHHHhCCCeEEEEe-ccCCC
Q 023401 73 KSKLVLLVSHELSLS-GGP---LLLMELAFLLRGVGTKVNWIT-IQKPS 116 (282)
Q Consensus 73 ~~KkILLISHELs~T-GAP---LlLleLA~~Lkq~G~~V~vL~-~~~G~ 116 (282)
++++|++++...... |++ -.--.|+..|.+.|..+.++- +..|.
T Consensus 1 ~~~~i~~~GDSit~G~g~~~~~~~~~~l~~~l~~~~~~~~v~n~g~~G~ 49 (185)
T 3hp4_A 1 MDNTILILGDXLSAAYGLQQEEGWVKLLQDKYDAEQSDIVLINASISGE 49 (185)
T ss_dssp -CEEEEEEECTTTTTTTSCGGGSHHHHHHHHHHHTTCCEEEEECCCTTC
T ss_pred CCCeEEEECCcccccCCCCCcccHHHHHHHHHHhcCCcEEEEECCcCCc
Confidence 478999999877653 322 223456778888888887775 44443
No 297
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=41.37 E-value=2e+02 Score=25.98 Aligned_cols=175 Identities=11% Similarity=0.041 Sum_probs=0.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEe-ccCCCCchhhhhhhHHHHHHc-CCceeeh---------
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWIT-IQKPSEEDEVIYSLEHKMWDR-GVQVISA--------- 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~-G~~V~vL~-~~~G~~~~~v~~~L~~kll~r-gI~v~~~--------- 139 (282)
|+-|||++|+=+-+ .=+.+..+.+.|++. |++++++. +++- .+.+++++. |+..-.+
T Consensus 23 ~~m~ki~~v~Gtr~---~~~~~a~li~~l~~~~~~~~~~~~tG~h~--------~~~~~~~~~~~i~~~~~l~~~~~~~~ 91 (396)
T 3dzc_A 23 NAMKKVLIVFGTRP---EAIKMAPLVQQLCQDNRFVAKVCVTGQHR--------EMLDQVLELFSITPDFDLNIMEPGQT 91 (396)
T ss_dssp -CCEEEEEEECSHH---HHHHHHHHHHHHHHCTTEEEEEEECCSSS--------HHHHHHHHHTTCCCSEECCCCCTTCC
T ss_pred CCCCeEEEEEeccH---hHHHHHHHHHHHHhCCCCcEEEEEecccH--------HHHHHHHHhcCCCCceeeecCCCCCC
Q ss_pred ---------hchhHHHHhhccCEEEE----echhchHHHHHHhhccCCCCCCceEEEeeecc--ccccc----------c
Q 023401 140 ---------KGQETINTALKADLIVL----NTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR--GHYFK----------L 194 (282)
Q Consensus 140 ---------k~~~~i~~a~~~DLVIa----NT~v~g~wl~~l~~~~~~~~~~pVIWWIHE~r--~~Yf~----------l 194 (282)
.....+-...++|+|++ ++..++...-... ++ |++-..+-++ ..|.. -
T Consensus 92 ~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~--~I-----Pv~h~~ag~rs~~~~~~~~~~~~r~~~~ 164 (396)
T 3dzc_A 92 LNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQ--QI-----PVGHVEAGLRTGNIYSPWPEEGNRKLTA 164 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTT--TC-----CEEEETCCCCCSCTTSSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHh--CC-----CEEEEECCccccccccCCcHHHHHHHHH
Q ss_pred cccccccccccccccchhhHHHHHHhhhhhcCCCCCCeeEEEecCcHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCCEE
Q 023401 195 DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGV--RNEDLL 272 (282)
Q Consensus 195 ~~vkhL~~v~~~~~dS~Ata~~w~~~~~~~l~Ikl~~~~vv~L~~~~~l~~~a~~~v~~~~lre~vr~~lGl--~~dd~l 272 (282)
...+.+.+. |+..++++...--++.+|.. +.-..-|.+.+.......+..+++.+|+++|+ +++..+
T Consensus 165 ~~a~~~~~~------se~~~~~l~~~G~~~~ki~v-----vGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~v 233 (396)
T 3dzc_A 165 ALTQYHFAP------TDTSRANLLQENYNAENIFV-----TGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLI 233 (396)
T ss_dssp HTCSEEEES------SHHHHHHHHHTTCCGGGEEE-----CCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEE
T ss_pred HhcCEEECC------CHHHHHHHHHcCCCcCcEEE-----ECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEE
Q ss_pred EEE
Q 023401 273 FAI 275 (282)
Q Consensus 273 v~~ 275 (282)
+..
T Consensus 234 lv~ 236 (396)
T 3dzc_A 234 LVT 236 (396)
T ss_dssp EEE
T ss_pred EEE
No 298
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=41.35 E-value=94 Score=26.09 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=25.4
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 68 ~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|..-++||++|+.. -+| =+=.++|+.|.+.|++|+++..
T Consensus 7 ~~~~l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 7 PTTRFTDRVVLITG----GGS--GLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp ---CCTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCccCCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 33346788776653 222 2556889999999999888763
No 299
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=41.26 E-value=25 Score=30.17 Aligned_cols=74 Identities=12% Similarity=0.168 Sum_probs=46.7
Q ss_pred ccccEEEEEeccCCCCCch--HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeehh-----chh
Q 023401 72 MKSKLVLLVSHELSLSGGP--LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAK-----GQE 143 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAP--LlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-gI~v~~~k-----~~~ 143 (282)
+++|+|++. -||+. +-..++++.|++.|++|.++..+.+. .++.+.. +... |- +..+. ...
T Consensus 6 l~~k~Illg-----vTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~---~fi~~~~--~~~l~~~-v~~~~~~~~~~~~ 74 (194)
T 1p3y_1 6 LKDKKLLIG-----ICGSISSVGISSYLLYFKSFFKEIRVVMTKTAE---DLIPAHT--VSYFCDH-VYSEHGENGKRHS 74 (194)
T ss_dssp GGGCEEEEE-----ECSCGGGGGTHHHHHHHTTTSSEEEEEECHHHH---HHSCHHH--HGGGSSE-EECTTCSSSCCCC
T ss_pred cCCCEEEEE-----EECHHHHHHHHHHHHHHHHCCCEEEEEEchhHH---HHHHHHH--HHHhcCC-EeccccccCCCcC
Confidence 578888775 34444 56789999999999999999966442 2222221 2222 32 55442 133
Q ss_pred HHHHhhccCEEEE
Q 023401 144 TINTALKADLIVL 156 (282)
Q Consensus 144 ~i~~a~~~DLVIa 156 (282)
.+..+..+|++++
T Consensus 75 hi~l~~~aD~~vI 87 (194)
T 1p3y_1 75 HVEIGRWADIYCI 87 (194)
T ss_dssp HHHHHHHCSEEEE
T ss_pred cccccccCCEEEE
Confidence 4666678998886
No 300
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=41.16 E-value=83 Score=26.89 Aligned_cols=84 Identities=10% Similarity=0.065 Sum_probs=41.6
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhch
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQ 142 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~ 142 (282)
.+.+-+++|.+|+.. -+| =+=.++|+.|.+.|++|.++... .+ -...+.+++.+.|..+. +-...
T Consensus 17 ~~~~m~~~k~~lVTG----as~--GIG~aia~~la~~G~~V~~~~r~-~~----~~~~~~~~l~~~~~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 17 RGSHMSRPQTAFVTG----VSS--GIGLAVARTLAARGIAVYGCARD-AK----NVSAAVDGLRAAGHDVDGSSCDVTST 85 (279)
T ss_dssp --------CEEEEES----TTS--HHHHHHHHHHHHTTCEEEEEESC-HH----HHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CcccccCCCEEEEeC----CCC--HHHHHHHHHHHHCCCEEEEEeCC-HH----HHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 344445677655542 222 25568899999999998776532 21 11223445544454432 11222
Q ss_pred hHHH--------HhhccCEEEEechhc
Q 023401 143 ETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 143 ~~i~--------~a~~~DLVIaNT~v~ 161 (282)
++++ .....|.+|.|..+.
T Consensus 86 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 112 (279)
T 3sju_A 86 DEVHAAVAAAVERFGPIGILVNSAGRN 112 (279)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 2222 234689999987653
No 301
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=41.01 E-value=1.3e+02 Score=25.79 Aligned_cols=79 Identities=11% Similarity=0.178 Sum_probs=45.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||++|+.. |+-=+=.++|+.|.+.|+.|.++... .+. ...+.+++.+.|..+. +-....+++
T Consensus 30 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~r~-~~~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~ 98 (276)
T 3r1i_A 30 LSGKRALITG------ASTGIGKKVALAYAEAGAQVAVAARH-SDA----LQVVADEIAGVGGKALPIRCDVTQPDQVRG 98 (276)
T ss_dssp CTTCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEESS-GGG----GHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC------CCCHHHHHHHHHHHHCCCEEEEEeCC-HHH----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 5678766543 22235568899999999998877643 211 1234555655543332 112222232
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
.....|.+|.|..+.
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 99 MLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 223799999998753
No 302
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=40.99 E-value=61 Score=25.40 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=43.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCC--CeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeehhch
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISAKGQ 142 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G--~~V~vL~~~~G~---~~~~v~~~L~~kll~rgI~v~~~k~~ 142 (282)
-|..++|+.+ +-..++..-+.+|...++.| .+|.++.-..|. .+++-...+.+++++.|+.+.-=+++
T Consensus 8 ~K~~ivi~s~-d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L~~~~~~l~~~~~~~~~~Gv~~~aC~~C 80 (117)
T 2fb6_A 8 DKLTILWTTD-NKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKLVANDTQVQTEILEMLQSGITIEACQDC 80 (117)
T ss_dssp SEEEEEECCC-CHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHHHHHCHHHHHHHHHHHHHTCEEEEEHHH
T ss_pred CeEEEEEEcC-ChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeeeccCCccHHHHHHHHHHcCCeEEEeHHH
Confidence 3667778775 33346666888999999999 799998833232 12222355666777777766643333
No 303
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=40.83 E-value=91 Score=25.83 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=23.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCe-EEEEe
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTK-VNWIT 111 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~-V~vL~ 111 (282)
|+||++|+++ -+|+ +=.++|+.|.+.|++ |.++.
T Consensus 3 l~~k~vlVtG----as~g--IG~~~a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 3 LTNKNVIFVA----ALGG--IGLDTSRELVKRNLKNFVILD 37 (254)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTCCSEEEEEE
T ss_pred CCCcEEEEEC----CCCh--HHHHHHHHHHHCCCcEEEEEe
Confidence 5688777653 2333 567899999999998 55554
No 304
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=40.76 E-value=63 Score=25.97 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=40.7
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh----c-h----hHH-H
Q 023401 77 VLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK----G-Q----ETI-N 146 (282)
Q Consensus 77 ILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k----~-~----~~i-~ 146 (282)
+|+.-||.+-. -++++|+.|.+.|+++..-. | ..+-+.+.|+++-.-. + . ..+ +
T Consensus 27 vliSv~d~dK~----~l~~~a~~l~~lGf~i~AT~---G---------Ta~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d 90 (143)
T 2yvq_A 27 ILIGIQQSFRP----RFLGVAEQLHNEGFKLFATE---A---------TSDWLNANNVPATPVAWPSQEGQNPSLSSIRK 90 (143)
T ss_dssp EEEECCGGGHH----HHHHHHHHHHTTTCEEEEEH---H---------HHHHHHHTTCCCEEECCGGGC-----CBCHHH
T ss_pred EEEEecccchH----HHHHHHHHHHHCCCEEEECc---h---------HHHHHHHcCCeEEEEEeccCCCcccccccHHH
Confidence 55555887654 47899999999999866543 3 2344555688876431 1 1 122 2
Q ss_pred --HhhccCEEEE
Q 023401 147 --TALKADLIVL 156 (282)
Q Consensus 147 --~a~~~DLVIa 156 (282)
.-.++|+||-
T Consensus 91 ~i~~g~i~lVIn 102 (143)
T 2yvq_A 91 LIRDGSIDLVIN 102 (143)
T ss_dssp HHHTTSCCEEEE
T ss_pred HHHCCCceEEEE
Confidence 3577999884
No 305
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=40.54 E-value=61 Score=27.09 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=27.0
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 77 VLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 77 ILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|||++-+. +..|--+.++++.+++.|+.+.++.-
T Consensus 110 iil~~~~~--~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPI--VEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCC--SSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCC--CCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 66776666 34466788999999999999999984
No 306
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=40.51 E-value=1.3e+02 Score=25.43 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=25.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
++||.+|+.. |+.=+=.++|+.|.+.|++|.++...
T Consensus 9 l~~k~vlVTG------as~gIG~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 9 LENKVAIITG------ACGGIGLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEEC------CCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5678666542 22235568999999999998877643
No 307
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=40.48 E-value=1.5e+02 Score=26.31 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=43.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
|++|.+|+.. -+ -=+=.++|+.|.+.|+.|.+...+-.+...+-...+.+.+.+.|..+. +-....+++
T Consensus 3 m~~k~vlVTG----as--~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~ 76 (324)
T 3u9l_A 3 MSKKIILITG----AS--SGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDR 76 (324)
T ss_dssp --CCEEEESS----CS--SHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CC--cHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHH
Confidence 4566555432 22 235568999999999999887643111122222234444444443332 112233332
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
.....|.+|.|...
T Consensus 77 ~~~~~~~~~g~iD~lVnnAG~ 97 (324)
T 3u9l_A 77 AIDQIIGEDGRIDVLIHNAGH 97 (324)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 22479999998764
No 308
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=40.10 E-value=83 Score=26.80 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=44.3
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-Hhhcc
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TALKA 151 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a~~~ 151 (282)
|+||++. -||. +=-++++.|.+.|++|.++.....+ .. ...+++...|+.++.. ....++. .+..+
T Consensus 12 ~~ilVtG----atG~--iG~~l~~~L~~~g~~V~~l~R~~~~-~~----~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~ 80 (318)
T 2r6j_A 12 SKILIFG----GTGY--IGNHMVKGSLKLGHPTYVFTRPNSS-KT----TLLDEFQSLGAIIVKGELDEHEKLVELMKKV 80 (318)
T ss_dssp CCEEEET----TTST--THHHHHHHHHHTTCCEEEEECTTCS-CH----HHHHHHHHTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CeEEEEC----CCch--HHHHHHHHHHHCCCcEEEEECCCCc-hh----hHHHHhhcCCCEEEEecCCCHHHHHHHHcCC
Confidence 4566553 2332 3346778888899999888754321 11 1123345568877632 2334454 45679
Q ss_pred CEEEEechh
Q 023401 152 DLIVLNTAV 160 (282)
Q Consensus 152 DLVIaNT~v 160 (282)
|.||.|+..
T Consensus 81 d~vi~~a~~ 89 (318)
T 2r6j_A 81 DVVISALAF 89 (318)
T ss_dssp SEEEECCCG
T ss_pred CEEEECCch
Confidence 999998753
No 309
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=39.99 E-value=63 Score=29.48 Aligned_cols=68 Identities=21% Similarity=0.211 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeccC--CCC--chhhhhhhHHHHHHcCCceeehh---chhHHH--HhhccCEEEEe
Q 023401 90 PLLLMELAFLLRGVGTKVNWITIQK--PSE--EDEVIYSLEHKMWDRGVQVISAK---GQETIN--TALKADLIVLN 157 (282)
Q Consensus 90 PLlLleLA~~Lkq~G~~V~vL~~~~--G~~--~~~v~~~L~~kll~rgI~v~~~k---~~~~i~--~a~~~DLVIaN 157 (282)
|=+...-.+.|.+.|++|+.+..+. +.. ......++.+..++.|||++.-. ..+.++ ...++|+||+-
T Consensus 12 ~~fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~ 88 (314)
T 1fmt_A 12 PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVV 88 (314)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCCCCCHHHHHHHHhcCCCEEEEe
Confidence 4344455556666799988777552 110 01112356788888999998542 122222 35789999874
No 310
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=39.91 E-value=42 Score=25.73 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=30.4
Q ss_pred HHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 95 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 95 eLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.++..|++.|.++++..+-++ +-...|.++||+++..
T Consensus 54 ~~~~~L~~~gv~~vi~~~iG~--------~a~~~L~~~GI~v~~~ 90 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGIGR--------RAIEYFNSLGISVVTG 90 (121)
T ss_dssp HHHHHHHHTTCCEEECSBCCH--------HHHHHHHHTTCEEECS
T ss_pred HHHHHHHHcCCCEEEECCCCH--------hHHHHHHHCCCEEEEC
Confidence 788889999999988886644 4568889999999974
No 311
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=39.77 E-value=1e+02 Score=26.09 Aligned_cols=82 Identities=15% Similarity=0.116 Sum_probs=45.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~---~-k~~~~i~- 146 (282)
++||.+|+.. -+| =+=.++|+.|.+.|+.|+++..... ..+-...+.+++...|.++.. | ....+++
T Consensus 9 l~~k~vlVTG----as~--GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 80 (262)
T 3ksu_A 9 LKNKVIVIAG----GIK--NLGALTAKTFALESVNLVLHYHQAK--DSDTANKLKDELEDQGAKVALYQSDLSNEEEVAK 80 (262)
T ss_dssp CTTCEEEEET----CSS--HHHHHHHHHHTTSSCEEEEEESCGG--GHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHH
T ss_pred CCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEecCcc--CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 5677666543 222 2557899999999999888753222 112222344555555544431 1 2222222
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
.....|.+|.|..+.
T Consensus 81 ~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 224689999987653
No 312
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=39.24 E-value=92 Score=26.34 Aligned_cols=80 Identities=19% Similarity=0.159 Sum_probs=46.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||++|+.. |+.=+=.++|+.|.+.|++|.++..+..+ -...+.+++.+.|..+. +-...++++
T Consensus 16 l~~k~~lVTG------as~gIG~aia~~l~~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 85 (270)
T 3is3_A 16 LDGKVALVTG------SGRGIGAAVAVHLGRLGAKVVVNYANSTK----DAEKVVSEIKALGSDAIAIKADIRQVPEIVK 85 (270)
T ss_dssp CTTCEEEESC------TTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred cCCCEEEEEC------CCchHHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 6788666532 22234568899999999999887754331 11234555555554433 112222222
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
.....|.+|.|..+.
T Consensus 86 ~~~~~~~~~g~id~lvnnAg~~ 107 (270)
T 3is3_A 86 LFDQAVAHFGHLDIAVSNSGVV 107 (270)
T ss_dssp HHHHHHHHHSCCCEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 234789999987753
No 313
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=39.21 E-value=1.6e+02 Score=24.69 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=26.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
++++|-+|..+.+..--.-++-.+-..+++.|+++.+....
T Consensus 14 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 54 (303)
T 3kke_A 14 RSGTIGLIVPDVNNAVFADMFSGVQMAASGHSTDVLLGQID 54 (303)
T ss_dssp ---CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45667777777665544556666778888888888876643
No 314
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=39.18 E-value=1e+02 Score=25.61 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=23.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|.+|++|+.. |+.=+=.++|+.|.+.|+.|.++..
T Consensus 1 Ms~k~vlVTG------as~GIG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 1 MSLGHIIVTG------AGSGLGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp --CCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667666543 2223556899999999999887763
No 315
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=39.11 E-value=37 Score=22.42 Aligned_cols=33 Identities=27% Similarity=0.479 Sum_probs=26.0
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
|.+++.-+ .+.+ .+-+.+.+.+|+|++++-|.+
T Consensus 10 grs~eqk~----~l~~-~i~~~l~~~lg~~~~~v~V~i 42 (61)
T 2opa_A 10 GRTDEQKR----NLVE-KVTEAVKETTGASEEKIVVFI 42 (61)
T ss_dssp CCCHHHHH----HHHH-HHHHHHHHHHCCCGGGCEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHhCcCcCeEEEEE
Confidence 55677666 7777 677889999999999987764
No 316
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=39.08 E-value=66 Score=28.92 Aligned_cols=37 Identities=30% Similarity=0.311 Sum_probs=31.0
Q ss_pred cccEEEEEeccCCCCCc-hHHHHHHHHHHHhCCCeEEEEec
Q 023401 73 KSKLVLLVSHELSLSGG-PLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 73 ~~KkILLISHELs~TGA-PLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++|-|+|||.--|..|. |+ +.|+.+++.|+.|..+.-
T Consensus 9 ~~k~iillTDG~~~~g~~p~---~aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 9 TIRQILVITDGCSNIGPDPV---EAARRAHRHGIVVNVIGI 46 (242)
T ss_dssp CEEEEEEEESSCCCSSSCHH---HHHHHHHHTTCEEEEEEE
T ss_pred CccEEEEEccCCCCCCCCHH---HHHHHHHHCCCEEEEEEe
Confidence 57889999999888765 54 778888999999999985
No 317
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=38.91 E-value=92 Score=22.87 Aligned_cols=23 Identities=4% Similarity=0.157 Sum_probs=14.8
Q ss_pred HHHHH-HHH-HhCCCeEEEEeccCC
Q 023401 93 LMELA-FLL-RGVGTKVNWITIQKP 115 (282)
Q Consensus 93 LleLA-~~L-kq~G~~V~vL~~~~G 115 (282)
.++.| .+. +..|.++.++....+
T Consensus 17 al~~a~~la~~~~~a~l~ll~v~~~ 41 (138)
T 3idf_A 17 AAQYILDMFGKDADCTLTLIHVKPE 41 (138)
T ss_dssp HHHHHHHHHTTCTTEEEEEEEEECC
T ss_pred HHHHHHHHhccCCCCEEEEEEEecC
Confidence 34444 555 567999988885444
No 318
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=38.78 E-value=98 Score=26.49 Aligned_cols=82 Identities=13% Similarity=0.091 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh--------chhHHH--HhhccCEEEE--ech
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--------GQETIN--TALKADLIVL--NTA 159 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k--------~~~~i~--~a~~~DLVIa--NT~ 159 (282)
....++++|++.|+.=+.+...+.+...+...++.+.+.+.|+++.... ....+. ...++|.||+ |..
T Consensus 138 ~~~~~~~~l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~~dai~~~~~~~ 217 (375)
T 4evq_A 138 IGRATGDAMIKAGLKKAVTVTWKYAAGEEMVSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGG 217 (375)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCCCCHHHHHHHHHHCCSEEEEECCTH
T ss_pred HHHHHHHHHHHcCCcEEEEEecCchHHHHHHHHHHHHHHHcCCeEEEEEecCCCCccHHHHHHHHHhcCCCEEEEecCcc
Confidence 3455678888888874444433333344455677788888899875321 112222 2457999997 566
Q ss_pred hchHHHHHHhhccC
Q 023401 160 VAGKWLDAVLKEDV 173 (282)
Q Consensus 160 v~g~wl~~l~~~~~ 173 (282)
.+...++++.+..+
T Consensus 218 ~a~~~~~~~~~~g~ 231 (375)
T 4evq_A 218 GALKFIKDYAAANL 231 (375)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHcCC
Confidence 66777888764443
No 319
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=38.64 E-value=1.1e+02 Score=24.87 Aligned_cols=75 Identities=20% Similarity=0.174 Sum_probs=43.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhcc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~ 151 (282)
|.+|+|.++-.|-- ..+-+......|+..|+++.+++..+|. .+. -..|+.+..+.....+....++
T Consensus 1 mm~~~v~ill~~g~---~~~e~~~~~~~l~~ag~~v~~vs~~~~~---~v~-------~~~g~~v~~d~~l~~~~~~~~~ 67 (197)
T 2rk3_A 1 MASKRALVILAKGA---EEMETVIPVDVMRRAGIKVTVAGLAGKD---PVQ-------CSRDVVICPDASLEDAKKEGPY 67 (197)
T ss_dssp -CCCEEEEEECTTC---CHHHHHHHHHHHHHTTCEEEEEETTCSS---CEE-------CTTSCEECCSEEHHHHHTTCCC
T ss_pred CCCCEEEEEECCCC---cHHHHHHHHHHHHHCCCEEEEEEcCCCC---ccc-------cCCCCEEeCCcCHHHcCCccCC
Confidence 34567776665411 2334455567889999999999865542 111 1346666655443333113679
Q ss_pred CEEEEech
Q 023401 152 DLIVLNTA 159 (282)
Q Consensus 152 DLVIaNT~ 159 (282)
|.||+=-.
T Consensus 68 D~livpGG 75 (197)
T 2rk3_A 68 DVVVLPGG 75 (197)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99987543
No 320
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=38.56 E-value=19 Score=30.31 Aligned_cols=36 Identities=25% Similarity=0.258 Sum_probs=25.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (282)
|++|+||+++ .+.-| -++++.|.+.|++|..+....
T Consensus 1 M~~~~ilVtG--aG~iG-----~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 1 MSLSKILIAG--CGDLG-----LELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp -CCCCEEEEC--CSHHH-----HHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCcEEEEC--CCHHH-----HHHHHHHHHCCCEEEEEeCCc
Confidence 5677888775 24334 477888999999999998543
No 321
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=38.55 E-value=25 Score=31.85 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=29.7
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
..+||+||+| .|.-.||+ -+.++++.|++.|.+++
T Consensus 193 l~~Gk~VLIV-DDViTTG~--Tl~~a~~~L~~aGA~vV 227 (291)
T 1o57_A 193 MKTGSNVLII-DDFMKAGG--TINGMINLLDEFNANVA 227 (291)
T ss_dssp SCTTCEEEEE-EEEESSSH--HHHHHHHHTGGGTCEEE
T ss_pred CCCcCEEEEE-EEEcCcHH--HHHHHHHHHHHCCCEEE
Confidence 3589999888 78888899 67799999999999865
No 322
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=38.51 E-value=1e+02 Score=25.88 Aligned_cols=80 Identities=14% Similarity=0.013 Sum_probs=43.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
+++|+||+.. |+-=+=.++|+.|.+.|++|.++..+..+. ...+.+++.+.+..+. +-...++++
T Consensus 24 l~~k~vlVTG------as~gIG~~la~~l~~~G~~v~i~~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~ 93 (267)
T 4iiu_A 24 AMSRSVLVTG------ASKGIGRAIARQLAADGFNIGVHYHRDAAG----AQETLNAIVANGGNGRLLSFDVANREQCRE 93 (267)
T ss_dssp -CCCEEEETT------TTSHHHHHHHHHHHHTTCEEEEEESSCHHH----HHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred cCCCEEEEEC------CCChHHHHHHHHHHHCCCEEEEEeCCchHH----HHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 4567655532 222255789999999999998887554321 1122344444433322 112222222
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
.....|.||.|..+.
T Consensus 94 ~~~~~~~~~g~id~li~nAg~~ 115 (267)
T 4iiu_A 94 VLEHEIAQHGAWYGVVSNAGIA 115 (267)
T ss_dssp HHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHhCCccEEEECCCCC
Confidence 234799999997653
No 323
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=38.46 E-value=1.1e+02 Score=24.88 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=24.7
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++++|-+|..+.+..--.-++-.+-..+++.|+++.+...
T Consensus 2 ~s~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 41 (275)
T 3d8u_A 2 NAYSIALIIPSLFEKACAHFLPSFQQALNKAGYQLLLGYS 41 (275)
T ss_dssp --CEEEEEESCSSCHHHHHHHHHHHHHHHHTSCEECCEEC
T ss_pred CceEEEEEeCCCccccHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 4567778877654332333455556778888998877653
No 324
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=38.44 E-value=73 Score=27.00 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=29.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+.++|+|++|. |++ .-+|+|..|.+.|.+|.++...
T Consensus 142 ~~~~k~vvViG------gG~-ig~E~A~~l~~~g~~Vtlv~~~ 177 (312)
T 4gcm_A 142 FFKNKRLFVIG------GGD-SAVEEGTFLTKFADKVTIVHRR 177 (312)
T ss_dssp GGTTCEEEEEC------CSH-HHHHHHHHHTTTCSEEEEECSS
T ss_pred ccCCCEEEEEC------CCH-HHHHHHHHHHhcCCEEEEEecc
Confidence 45689999984 444 5689999999999999999744
No 325
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=38.33 E-value=54 Score=26.64 Aligned_cols=75 Identities=20% Similarity=0.074 Sum_probs=43.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCC--eEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-hchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGT--KVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-KGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~--~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~-~-k~~~~i~- 146 (282)
|++|+||+.. -|| -+=.++++.|.+.|+ +|.++..+.... .+. ...++..+. | ....++.
T Consensus 16 m~~~~vlVtG----asg--~iG~~l~~~L~~~G~~~~V~~~~r~~~~~-~~~--------~~~~~~~~~~D~~d~~~~~~ 80 (242)
T 2bka_A 16 MQNKSVFILG----ASG--ETGRVLLKEILEQGLFSKVTLIGRRKLTF-DEE--------AYKNVNQEVVDFEKLDDYAS 80 (242)
T ss_dssp HTCCEEEEEC----TTS--HHHHHHHHHHHHHTCCSEEEEEESSCCCC-CSG--------GGGGCEEEECCGGGGGGGGG
T ss_pred hcCCeEEEEC----CCc--HHHHHHHHHHHcCCCCCEEEEEEcCCCCc-ccc--------ccCCceEEecCcCCHHHHHH
Confidence 6778877653 233 255678888989999 888887443221 111 112333331 1 2233343
Q ss_pred HhhccCEEEEechhc
Q 023401 147 TALKADLIVLNTAVA 161 (282)
Q Consensus 147 ~a~~~DLVIaNT~v~ 161 (282)
....+|.||.|....
T Consensus 81 ~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 81 AFQGHDVGFCCLGTT 95 (242)
T ss_dssp GGSSCSEEEECCCCC
T ss_pred HhcCCCEEEECCCcc
Confidence 345799999987654
No 326
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=38.24 E-value=1.4e+02 Score=26.51 Aligned_cols=74 Identities=16% Similarity=0.140 Sum_probs=41.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceee---hhchhHHH-H
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVIS---AKGQETIN-T 147 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-gI~v~~---~k~~~~i~-~ 147 (282)
.+|+||++ +-||. +=-++++.|.+.|++|.++..+... . -.+++.+. ++.++. -....++. .
T Consensus 4 ~~~~ilVt----GatG~--iG~~l~~~L~~~g~~V~~~~R~~~~---~----~~~~l~~~~~v~~v~~D~l~d~~~l~~~ 70 (352)
T 1xgk_A 4 QKKTIAVV----GATGR--QGASLIRVAAAVGHHVRAQVHSLKG---L----IAEELQAIPNVTLFQGPLLNNVPLMDTL 70 (352)
T ss_dssp CCCCEEEE----STTSH--HHHHHHHHHHHTTCCEEEEESCSCS---H----HHHHHHTSTTEEEEESCCTTCHHHHHHH
T ss_pred CCCEEEEE----CCCCH--HHHHHHHHHHhCCCEEEEEECCCCh---h----hHHHHhhcCCcEEEECCccCCHHHHHHH
Confidence 35666654 23332 4456778888889999988743221 0 01233332 454442 12334454 4
Q ss_pred hhccCEEEEech
Q 023401 148 ALKADLIVLNTA 159 (282)
Q Consensus 148 a~~~DLVIaNT~ 159 (282)
...+|.||.|+.
T Consensus 71 ~~~~d~Vi~~a~ 82 (352)
T 1xgk_A 71 FEGAHLAFINTT 82 (352)
T ss_dssp HTTCSEEEECCC
T ss_pred HhcCCEEEEcCC
Confidence 567999998874
No 327
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=38.06 E-value=74 Score=28.53 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=27.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEec
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITI 112 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G-~~V~vL~~ 112 (282)
+..|||+|+-.-+-- -|-..-.|++.|.+.| ++|.+...
T Consensus 3 ~~~kvLiv~G~~~H~-~~~~~~~l~~~l~~~g~f~V~~~~d 42 (281)
T 4e5v_A 3 KPIKTLLITGQNNHN-WQVSHVVLKQILENSGRFDVDFVIS 42 (281)
T ss_dssp CCEEEEEEESCCSSC-HHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CceEEEEEcCCCCCC-hHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 446789986544222 4555567788999999 89988863
No 328
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=37.99 E-value=45 Score=26.37 Aligned_cols=78 Identities=13% Similarity=0.044 Sum_probs=39.3
Q ss_pred ccccEEEEE-eccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHH
Q 023401 72 MKSKLVLLV-SHELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT 147 (282)
Q Consensus 72 ~~~KkILLI-SHELs~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~~ 147 (282)
|..|+|||| +|+.-|+ |+.= -+++.+. |..+.+-+ |-.+ . .+-+.-.+-+.++||..-.. +..... .
T Consensus 1 M~~~~VLFVC~gN~cRS--pmAE-a~~~~~~--~~~~~v~SAGt~~--~-~~~p~a~~~l~~~Gid~s~~~ar~l~~~-~ 71 (131)
T 1jf8_A 1 MDKKTIYFISTGNSARS--QMAE-GWGKEIL--GEGWNVYSAGIET--H-GVNPKAIEAMKEVDIDISNHTSDLIDND-I 71 (131)
T ss_dssp -CCEEEEEEESSSSSHH--HHHH-HHHHHHS--TTTEEEEEEESSC--C-CCCHHHHHHHHHTTCCCTTCCCCBCCHH-H
T ss_pred CCCCEEEEEcCCcchHH--HHHH-HHHHHhc--CCCEEEEcCcCCC--C-CCCHHHHHHHHHcCCCcccCccccCChH-H
Confidence 445789999 4555444 3221 1222222 23344444 2222 1 23334456677789987532 222222 2
Q ss_pred hhccCEEEEec
Q 023401 148 ALKADLIVLNT 158 (282)
Q Consensus 148 a~~~DLVIaNT 158 (282)
...||+||+=+
T Consensus 72 ~~~~D~Ii~m~ 82 (131)
T 1jf8_A 72 LKQSDLVVTLC 82 (131)
T ss_dssp HHHCSEEEECS
T ss_pred hccCCEEEEcC
Confidence 56799999764
No 329
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=37.98 E-value=1.1e+02 Score=26.19 Aligned_cols=80 Identities=8% Similarity=0.093 Sum_probs=47.9
Q ss_pred HHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh--------chhHHH--HhhccCEEEE--echh
Q 023401 93 LMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--------GQETIN--TALKADLIVL--NTAV 160 (282)
Q Consensus 93 LleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k--------~~~~i~--~a~~~DLVIa--NT~v 160 (282)
...++++|++.|..=+.+...+.+.+.+....+.+.+.+.|+++.... ....+. ...++|.|++ |...
T Consensus 127 ~~~~~~~l~~~g~~~ia~i~~~~~~g~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~ 206 (368)
T 4eyg_A 127 SIIIGDWAAKNGIKKVATLTSDYAPGNDALAFFKERFTAGGGEIVEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAGQ 206 (368)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHCCSEEEEECCTTC
T ss_pred HHHHHHHHHHcCCCEEEEEecCchHhHHHHHHHHHHHHHcCCEEEEEEeCCCCCCcHHHHHHHHHhcCCCEEEEeccchH
Confidence 345778888888764444433332333445567778888898876321 112222 2457999997 5556
Q ss_pred chHHHHHHhhcc
Q 023401 161 AGKWLDAVLKED 172 (282)
Q Consensus 161 ~g~wl~~l~~~~ 172 (282)
+...++++.+..
T Consensus 207 a~~~~~~~~~~g 218 (368)
T 4eyg_A 207 GGNFMKQFAERG 218 (368)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 677888876433
No 330
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=37.94 E-value=48 Score=28.19 Aligned_cols=45 Identities=13% Similarity=0.136 Sum_probs=30.6
Q ss_pred cccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 62 IATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 62 ~~~~~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
+..+..+...|+||+||+.. -+| -+=.++|+.|.+.|++|.++..
T Consensus 14 ~~~~~~~~~~l~~k~vlITG----asg--giG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 14 LQKAMLPPNSFQGKVAFITG----GGT--GLGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp CCSCCSCTTTTTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCCcccCCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 33444455668899877653 223 2556889999999999887763
No 331
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=37.75 E-value=1.4e+02 Score=25.41 Aligned_cols=36 Identities=11% Similarity=0.031 Sum_probs=25.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
-++||++|+.. |+-=+=.++|+.|.+.|+.|.++..
T Consensus 24 ~l~gk~vlVTG------as~gIG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 24 KLTGRKALVTG------ATGGIGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp CCTTCEEEESS------TTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeC------CCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 36788766532 2233557899999999999887753
No 332
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=37.68 E-value=1.8e+02 Score=24.44 Aligned_cols=38 Identities=13% Similarity=0.021 Sum_probs=26.4
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
.-++||++|+.. -+| =+=.++|+.|.+.|+.|+++...
T Consensus 6 ~~l~~k~~lVTG----as~--gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 6 ADFEGKTALITG----GAR--GMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CTTTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEeC----CCc--hHHHHHHHHHHHCCCeEEEEeCC
Confidence 346788766653 222 25568899999999998877643
No 333
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=37.67 E-value=39 Score=28.89 Aligned_cols=37 Identities=30% Similarity=0.363 Sum_probs=29.6
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
..-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 121 ~~~~~gk~VliV-DDii~TG~--Tl~~~~~~L~~~g~~~v 157 (217)
T 1z7g_A 121 LSTLTGKNVLIV-EDIIDTGK--TMQTLLSLVRQYNPKMV 157 (217)
T ss_dssp GGGGTTSEEEEE-EEECCCHH--HHHHHHHHHHTTCCSEE
T ss_pred ccccCCCEEEEE-eceeCcHH--HHHHHHHHHHhcCCCEE
Confidence 356799998887 77777888 66788999999998643
No 334
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=37.53 E-value=1.2e+02 Score=24.91 Aligned_cols=78 Identities=18% Similarity=0.171 Sum_probs=44.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
+++|++|+.. |+-=+=.++|+.|.+.|++|.++... .+ -...+.+++...+..+. +-...++++
T Consensus 7 ~~~k~vlITG------as~giG~~~a~~l~~~G~~V~~~~r~-~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (253)
T 3qiv_A 7 FENKVGIVTG------SGGGIGQAYAEALAREGAAVVVADIN-AE----AAEAVAKQIVADGGTAISVAVDVSDPESAKA 75 (253)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESC-HH----HHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred cCCCEEEEEC------CCChHHHHHHHHHHHCCCEEEEEcCC-HH----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 3677666542 22235578999999999998776532 21 11233455555444332 112222232
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
....+|.+|.|..+
T Consensus 76 ~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 76 MADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 22379999999876
No 335
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=37.48 E-value=1.2e+02 Score=25.35 Aligned_cols=78 Identities=18% Similarity=0.260 Sum_probs=43.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||++|+.. -+|+ +=.++|+.|.+.|++|.++..+ .+ . ...+.+++...|..+. +-....+++
T Consensus 5 l~~k~~lVTG----as~g--IG~aia~~l~~~G~~V~~~~r~-~~---~-~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~ 73 (247)
T 2jah_A 5 LQGKVALITG----ASSG--IGEATARALAAEGAAVAIAARR-VE---K-LRALGDELTAAGAKVHVLELDVADRQGVDA 73 (247)
T ss_dssp TTTCEEEEES----CSSH--HHHHHHHHHHHTTCEEEEEESC-HH---H-HHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCCH--HHHHHHHHHHHCCCEEEEEECC-HH---H-HHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 6778766653 2222 5568899999999998877633 21 1 1123445544443332 112222232
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
....+|.+|.|..+
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 74 AVASTVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 22479999998765
No 336
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=37.47 E-value=34 Score=29.54 Aligned_cols=35 Identities=14% Similarity=0.029 Sum_probs=28.7
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 100 ~v~Gk~VLLV-DDii~TG~--Tl~~a~~~L~~~Ga~~V 134 (220)
T 1tc1_A 100 SIEGHHVLIV-EDIVDTAL--TLNYLYHMYFTRRPASL 134 (220)
T ss_dssp CCTTSEEEEE-EEEESSCH--HHHHHHHHHHTTCCSEE
T ss_pred cCCCCEEEEE-eCccCcHH--HHHHHHHHHHhcCCCEE
Confidence 3689999888 67777898 67789999999997643
No 337
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=37.36 E-value=71 Score=25.08 Aligned_cols=43 Identities=7% Similarity=0.036 Sum_probs=28.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS 116 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~ 116 (282)
.|..+++++.......-..-+.+|.-....|++|.+....+|-
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV 58 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGP 58 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcH
Confidence 3445555554334455556667777778889999988876664
No 338
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=37.33 E-value=90 Score=25.58 Aligned_cols=81 Identities=11% Similarity=0.151 Sum_probs=45.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC---Cceee--h--hch
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG---VQVIS--A--KGQ 142 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rg---I~v~~--~--k~~ 142 (282)
..++||++|+.. |+.=+=.++|+.|.+.|++|.++... .+ -...+.+++.+.+ ..++. - ...
T Consensus 10 ~~l~~k~vlITG------as~gIG~~ia~~l~~~G~~V~~~~r~-~~----~~~~~~~~~~~~~~~~~~~~~~d~d~~~~ 78 (247)
T 3i1j_A 10 ELLKGRVILVTG------AARGIGAAAARAYAAHGASVVLLGRT-EA----SLAEVSDQIKSAGQPQPLIIALNLENATA 78 (247)
T ss_dssp TTTTTCEEEESS------TTSHHHHHHHHHHHHTTCEEEEEESC-HH----HHHHHHHHHHHTTSCCCEEEECCTTTCCH
T ss_pred ccCCCCEEEEeC------CCChHHHHHHHHHHHCCCEEEEEecC-HH----HHHHHHHHHHhcCCCCceEEEeccccCCH
Confidence 457888776643 22235568899999999998776532 21 1123345555443 11221 1 122
Q ss_pred hHHH--------HhhccCEEEEechhc
Q 023401 143 ETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 143 ~~i~--------~a~~~DLVIaNT~v~ 161 (282)
++++ .....|.+|.|..+.
T Consensus 79 ~~~~~~~~~~~~~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 79 QQYRELAARVEHEFGRLDGLLHNASII 105 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCccC
Confidence 2222 234799999998764
No 339
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=37.27 E-value=52 Score=29.40 Aligned_cols=36 Identities=28% Similarity=0.323 Sum_probs=28.3
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 76 kILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+||+++. ...|==.-++.||+.|++.|++|.+++..
T Consensus 2 ~Il~~~~--~~~GHv~P~l~la~~L~~~Gh~V~~~~~~ 37 (415)
T 1iir_A 2 RVLLATC--GSRGDTEPLVALAVRVRDLGADVRMCAPP 37 (415)
T ss_dssp EEEEECC--SCHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred eEEEEcC--CCchhHHHHHHHHHHHHHCCCeEEEEcCH
Confidence 5777753 33466667899999999999999999844
No 340
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=37.27 E-value=1.9e+02 Score=24.45 Aligned_cols=37 Identities=14% Similarity=0.052 Sum_probs=25.8
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
-++||.+|+.. |+.=+=.++|+.|.+.|+.|+++...
T Consensus 8 ~l~~k~~lVTG------as~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTG------AARGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp TTTTCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeC------CCchHHHHHHHHHHHCCCeEEEEecc
Confidence 35778666543 22235578999999999999887644
No 341
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=37.16 E-value=57 Score=27.21 Aligned_cols=39 Identities=15% Similarity=0.139 Sum_probs=30.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS 116 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~ 116 (282)
+.-+++||+ +|-.--++++++..|+.|..++.+++..++
T Consensus 115 ~Dvvi~iS~----SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s 153 (201)
T 3trj_A 115 DDILLVITT----SGDSENILSAVEEAHDLEMKVIALTGGSGG 153 (201)
T ss_dssp TCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEEETTCC
T ss_pred CCEEEEEeC----CCCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 444555554 777778899999999999999999976663
No 342
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=37.13 E-value=2.4e+02 Score=25.68 Aligned_cols=57 Identities=11% Similarity=0.215 Sum_probs=33.5
Q ss_pred cchhhHHHHHHhhhhhcCCCCCCeeEEEecCc--HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEec
Q 023401 209 DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS--KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 277 (282)
Q Consensus 209 dS~Ata~~w~~~~~~~l~Ikl~~~~vv~L~~~--~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~~~ 277 (282)
.|+...++..+ +|+ |+..|+-.||. |.+.+ .. .+..++.+|+++|++++..++.+..
T Consensus 153 ~te~~~~~l~~-----~G~--~~~~I~vtGnp~~D~~~~----~~-~~~~~~~~~~~lgl~~~~~iLvt~h 211 (385)
T 4hwg_A 153 LTEHARRYLIA-----EGL--PAELTFKSGSHMPEVLDR----FM-PKILKSDILDKLSLTPKQYFLISSH 211 (385)
T ss_dssp SSHHHHHHHHH-----TTC--CGGGEEECCCSHHHHHHH----HH-HHHHHCCHHHHTTCCTTSEEEEEEC
T ss_pred CCHHHHHHHHH-----cCC--CcCcEEEECCchHHHHHH----hh-hhcchhHHHHHcCCCcCCEEEEEeC
Confidence 46666666543 244 33345666764 33332 11 2246788999999988887776554
No 343
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1
Probab=36.95 E-value=1.1e+02 Score=27.80 Aligned_cols=81 Identities=16% Similarity=0.155 Sum_probs=49.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHh-CCCeEEEEeccCCCCchhhhhhhHHHHHHcCC----ceeeh---------
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV----QVISA--------- 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq-~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI----~v~~~--------- 139 (282)
.|+|++|..++ |.=++=+=|++.|++ .|.+|++.+.. +|.-+++ ..+.+...|. .++..
T Consensus 160 ~~~v~~v~DNa---GEiv~Dl~l~~~Ll~~~g~~V~~~vK~-~P~vnDv---T~~D~~~~~~~~~~~vi~~G~~~~g~~l 232 (299)
T 2g8l_A 160 AENILYITDNV---GEHYFDAILIEKIREISNAEVYIAGKE-GPIINDA---TVEDLKRAGLEKLGKVISTGTRIVGVPL 232 (299)
T ss_dssp CSEEEEECCBT---THHHHHHHHHHHHHHHCCCEEEEEEBS-SCCTTBC---BHHHHHHTTGGGTSEEEECSSSSSSCCT
T ss_pred CCEEEEEecCC---ccHHHhHHHHHHHHHhcCCeEEEEECC-cCceeeC---CHHHHHHcCcchhhhhhcCCCCCCCCCh
Confidence 57899997665 444444567899999 99998877655 4443333 4455554433 22221
Q ss_pred -hchhHH-HHhhccCEEEEechhc
Q 023401 140 -KGQETI-NTALKADLIVLNTAVA 161 (282)
Q Consensus 140 -k~~~~i-~~a~~~DLVIaNT~v~ 161 (282)
.-...+ +...++||||+=--..
T Consensus 233 ~~~s~el~~~~~~adLVI~KG~~N 256 (299)
T 2g8l_A 233 KLVSREFMEAFNKADVIIAKGQGN 256 (299)
T ss_dssp TTSCHHHHHHHHHCSEEEEEHHHH
T ss_pred HhCCHHHHHHHhcCCEEEEeCCch
Confidence 111122 3567899999876654
No 344
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=36.88 E-value=1.8e+02 Score=24.10 Aligned_cols=39 Identities=10% Similarity=-0.234 Sum_probs=24.1
Q ss_pred cccEEEEEecc-C---CCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 73 KSKLVLLVSHE-L---SLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 73 ~~KkILLISHE-L---s~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
++++|-+|..+ . +..--.-++-.+...+++.|+++.+..
T Consensus 3 ~s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 45 (287)
T 3bbl_A 3 LSFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFP 45 (287)
T ss_dssp CCCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECC
T ss_pred ceeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEEEEe
Confidence 35667777665 4 333233355556677888898877654
No 345
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=36.35 E-value=66 Score=25.48 Aligned_cols=39 Identities=18% Similarity=0.246 Sum_probs=30.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
++--+++||+. |-.--..+.++.+|+.|..+..+++..+
T Consensus 82 ~~d~vi~iS~s----G~t~~~~~~~~~ak~~g~~vi~IT~~~~ 120 (180)
T 1jeo_A 82 KDDLLILISGS----GRTESVLTVAKKAKNINNNIIAIVCECG 120 (180)
T ss_dssp TTCEEEEEESS----SCCHHHHHHHHHHHTTCSCEEEEESSCC
T ss_pred CCCEEEEEeCC----CCcHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 45567788764 5556788999999999999999996644
No 346
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=36.26 E-value=84 Score=25.89 Aligned_cols=38 Identities=11% Similarity=0.193 Sum_probs=20.9
Q ss_pred cccEEEEEeccCCCCCchH---HHHHHHHHHHhCCCeEEEEe
Q 023401 73 KSKLVLLVSHELSLSGGPL---LLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPL---lLleLA~~Lkq~G~~V~vL~ 111 (282)
++++|-+|..+.+. +.|. ++-.+...+++.|+++.+..
T Consensus 4 ~~~~Ig~v~~~~~~-~~~~~~~~~~gi~~~a~~~g~~~~~~~ 44 (289)
T 3brs_A 4 KQYYMICIPKVLDD-SSDFWSVLVEGAQMAAKEYEIKLEFMA 44 (289)
T ss_dssp -CCEEEEECSCCCS-SSHHHHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCcEEEEEeCCCCC-CchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 35567777665441 1232 33444566677787776654
No 347
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=36.18 E-value=1.3e+02 Score=25.60 Aligned_cols=78 Identities=17% Similarity=0.151 Sum_probs=42.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
|++|++|+.. -+| =+=.++|+.|.+.|++|.++... .+ .. ..+.+++.+.|..+. +-....+++
T Consensus 20 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r~-~~---~~-~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 88 (277)
T 2rhc_B 20 QDSEVALVTG----ATS--GIGLEIARRLGKEGLRVFVCARG-EE---GL-RTTLKELREAGVEADGRTCDVRSVPEIEA 88 (277)
T ss_dssp TTSCEEEEET----CSS--HHHHHHHHHHHHTTCEEEEEESC-HH---HH-HHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEeCC-HH---HH-HHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 5778766542 222 25568899999999998877632 21 11 122344444443322 112222222
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
....+|.||.|..+
T Consensus 89 ~~~~~~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 89 LVAAVVERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHHHHHHTCSCSEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 12369999998764
No 348
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=36.09 E-value=1.7e+02 Score=24.87 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=43.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~---~-k~~~~i~- 146 (282)
++||++|+.. |+-=+=.++|+.|.+.|++|.++. +... . ..+.+++.+.|..+.. | ...+.+.
T Consensus 29 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~-r~~~-~----~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 96 (273)
T 3uf0_A 29 LAGRTAVVTG------AGSGIGRAIAHGYARAGAHVLAWG-RTDG-V----KEVADEIADGGGSAEAVVADLADLEGAAN 96 (273)
T ss_dssp CTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEE-SSTH-H----HHHHHHHHTTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC------CCcHHHHHHHHHHHHCCCEEEEEc-CHHH-H----HHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 5788766642 222255688999999999988776 3221 1 1234455544433321 1 1222221
Q ss_pred ------HhhccCEEEEechhc
Q 023401 147 ------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 ------~a~~~DLVIaNT~v~ 161 (282)
....+|.+|.|..+.
T Consensus 97 ~~~~~~~~g~iD~lv~nAg~~ 117 (273)
T 3uf0_A 97 VAEELAATRRVDVLVNNAGII 117 (273)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHhcCCCcEEEECCCCC
Confidence 234799999997654
No 349
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=36.03 E-value=42 Score=22.89 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=26.3
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
|.+++.-+ .+.+ .+-+.+.+.+|+|++|+.|.+
T Consensus 10 Grs~eqk~----~L~~-~it~~~~~~lg~p~~~v~V~i 42 (65)
T 3ry0_A 10 GRSPQEVA----ALGE-ALTAAAHETLGTPVEAVRVIV 42 (65)
T ss_dssp CCCHHHHH----HHHH-HHHHHHHHHHCCCGGGCEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHhCcCcccEEEEE
Confidence 56777766 7777 688889999999999987654
No 350
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=35.95 E-value=1e+02 Score=25.54 Aligned_cols=79 Identities=20% Similarity=0.156 Sum_probs=42.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
+++|+||+.. -+| -+=.++++.|.+.|++|.++... .+ .. ..+.+++...|..+. +-....+++
T Consensus 12 l~~k~vlITG----asg--giG~~la~~l~~~G~~V~~~~r~-~~---~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 80 (266)
T 1xq1_A 12 LKAKTVLVTG----GTK--GIGHAIVEEFAGFGAVIHTCARN-EY---EL-NECLSKWQKKGFQVTGSVCDASLRPEREK 80 (266)
T ss_dssp CTTCEEEETT----TTS--HHHHHHHHHHHHTTCEEEEEESC-HH---HH-HHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEeCC-HH---HH-HHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence 5778766532 222 35578999999999998877632 21 11 122334444443322 112222222
Q ss_pred ---H----h-hccCEEEEechhc
Q 023401 147 ---T----A-LKADLIVLNTAVA 161 (282)
Q Consensus 147 ---~----a-~~~DLVIaNT~v~ 161 (282)
. . ..+|.||.|..+.
T Consensus 81 ~~~~~~~~~~~~id~li~~Ag~~ 103 (266)
T 1xq1_A 81 LMQTVSSMFGGKLDILINNLGAI 103 (266)
T ss_dssp HHHHHHHHHTTCCSEEEEECCC-
T ss_pred HHHHHHHHhCCCCcEEEECCCCC
Confidence 1 1 5789999997653
No 351
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=35.89 E-value=1.1e+02 Score=25.73 Aligned_cols=80 Identities=6% Similarity=-0.023 Sum_probs=43.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||++|+.. -+| =+=.++|+.|.+.|+.|+++..+..+. ...+.+++.+.|..+. +-....+++
T Consensus 6 l~~k~vlVTG----as~--GIG~aia~~la~~G~~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 75 (259)
T 3edm_A 6 FTNRTIVVAG----AGR--DIGRACAIRFAQEGANVVLTYNGAAEG----AATAVAEIEKLGRSALAIKADLTNAAEVEA 75 (259)
T ss_dssp TTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEECSSCHH----HHHHHHHHHTTTSCCEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEcCCCHHH----HHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 5677666542 122 244688999999999998876443321 1122344444443322 112222232
Q ss_pred -------HhhccCEEEEechhc
Q 023401 147 -------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v~ 161 (282)
.....|.+|.|....
T Consensus 76 ~~~~~~~~~g~id~lv~nAg~~ 97 (259)
T 3edm_A 76 AISAAADKFGEIHGLVHVAGGL 97 (259)
T ss_dssp HHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHhCCCCEEEECCCcc
Confidence 224789999988643
No 352
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=35.80 E-value=1.3e+02 Score=25.11 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=23.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
++||++|+.. |+-=+=.++|+.|.+.|++|.++.
T Consensus 6 l~~k~vlVTG------as~gIG~~ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 6 LEGKSALITG------SARGIGRAFAEAYVREGATVAIAD 39 (259)
T ss_dssp TTTCEEEEET------CSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEEC------CCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4677766653 222355688999999999987765
No 353
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=35.70 E-value=1.8e+02 Score=23.80 Aligned_cols=39 Identities=8% Similarity=-0.118 Sum_probs=24.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
++++|-+|..+.+..-..-++-.+-..+++.|+++.+..
T Consensus 6 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~ 44 (289)
T 1dbq_A 6 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGN 44 (289)
T ss_dssp --CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 456788888776543333345555677788899887754
No 354
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=35.63 E-value=29 Score=31.17 Aligned_cols=80 Identities=13% Similarity=0.180 Sum_probs=46.2
Q ss_pred ccEEEEEeccCCCCC--ch-HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeehhch----hHH
Q 023401 74 SKLVLLVSHELSLSG--GP-LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAKGQ----ETI 145 (282)
Q Consensus 74 ~KkILLISHELs~TG--AP-LlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-gI~v~~~k~~----~~i 145 (282)
+++++.|..-.+... =| =-..++++.|.+.|.+++++. |+.+.+ +.+++.+. +-+++.-.+. +..
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g---~~~e~~----~~~~i~~~~~~~~~~l~g~~sl~e~~ 256 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFG---GPMDLE----MVQPVVEQMETKPIVATGKFQLGPLA 256 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECC---CTTTHH----HHHHHHHTCSSCCEECTTCCCHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEe---CcchHH----HHHHHHHhcccccEEeeCCCCHHHHH
Confidence 566777766554321 12 257899999988899987643 332222 24455432 2222222222 233
Q ss_pred HHhhccCEEEEe-chh
Q 023401 146 NTALKADLIVLN-TAV 160 (282)
Q Consensus 146 ~~a~~~DLVIaN-T~v 160 (282)
.....+|++|.| |..
T Consensus 257 ali~~a~~~i~~DsG~ 272 (349)
T 3tov_A 257 AAMNRCNLLITNDSGP 272 (349)
T ss_dssp HHHHTCSEEEEESSHH
T ss_pred HHHHhCCEEEECCCCH
Confidence 467889999999 764
No 355
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=35.62 E-value=55 Score=25.10 Aligned_cols=70 Identities=13% Similarity=0.051 Sum_probs=39.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccCE
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~DL 153 (282)
+|+|++|+ .+..| ..++..|++.|++ +.+.++..+ ..++...+.|+.+......+ ....++|+
T Consensus 21 ~~~v~iiG--~G~iG-----~~~a~~l~~~g~~-v~v~~r~~~-------~~~~~a~~~~~~~~~~~~~~--~~~~~~Di 83 (144)
T 3oj0_A 21 GNKILLVG--NGMLA-----SEIAPYFSYPQYK-VTVAGRNID-------HVRAFAEKYEYEYVLINDID--SLIKNNDV 83 (144)
T ss_dssp CCEEEEEC--CSHHH-----HHHGGGCCTTTCE-EEEEESCHH-------HHHHHHHHHTCEEEECSCHH--HHHHTCSE
T ss_pred CCEEEEEC--CCHHH-----HHHHHHHHhCCCE-EEEEcCCHH-------HHHHHHHHhCCceEeecCHH--HHhcCCCE
Confidence 89999997 23223 3556777788999 555545431 11222223365543221111 23568999
Q ss_pred EEEechh
Q 023401 154 IVLNTAV 160 (282)
Q Consensus 154 VIaNT~v 160 (282)
||..|-.
T Consensus 84 vi~at~~ 90 (144)
T 3oj0_A 84 IITATSS 90 (144)
T ss_dssp EEECSCC
T ss_pred EEEeCCC
Confidence 9988764
No 356
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=35.48 E-value=1.1e+02 Score=25.74 Aligned_cols=38 Identities=11% Similarity=0.210 Sum_probs=24.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+++|++|+.. -+++-=+=.++|+.|.+.|++|.++...
T Consensus 7 l~~k~vlVTG----as~~~gIG~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTG----VASKLSIAYGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp TTTCEEEECC----CCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCEEEEEC----CCCCCCHHHHHHHHHHHCCCEEEEEcCc
Confidence 5677666532 1100125568899999999998887643
No 357
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=35.37 E-value=1.9e+02 Score=26.64 Aligned_cols=83 Identities=13% Similarity=0.154 Sum_probs=48.1
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-CchhhhhhhHHHHHHcCCceeehhchhHH
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISAKGQETI 145 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~~~v~~~L~~kll~rgI~v~~~k~~~~i 145 (282)
++.+|.+...++| +|--| | ..+...+...+.|..+.+......| .+|.- |..++.+.||++..-...-.-
T Consensus 114 ~~~~~I~~g~~IL-Th~~S--~---tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~---la~~L~~~gI~vtli~Dsa~~ 184 (315)
T 3ecs_A 114 LCHTFIKDGATIL-THAYS--R---VVLRVLEAAVAAKKRFSVYVTESQPDLSGKK---MAKALCHLNVPVTVVLDAAVG 184 (315)
T ss_dssp HHGGGCCTTEEEE-ECSCC--H---HHHHHHHHHHTTTCCEEEEEECCTTTTHHHH---HHHHHHTTTCCEEEECGGGHH
T ss_pred HHHHHcCCCCEEE-EcCCc--H---HHHHHHHHHHHcCCeEEEEEecCCCcchHHH---HHHHHHHcCCCEEEEehhHHH
Confidence 6778887765544 57544 3 3344445556678777777755554 23432 578888889997633211111
Q ss_pred HHhhccCEEEEec
Q 023401 146 NTALKADLIVLNT 158 (282)
Q Consensus 146 ~~a~~~DLVIaNT 158 (282)
-...++|.||+++
T Consensus 185 ~~m~~vd~VivGA 197 (315)
T 3ecs_A 185 YIMEKADLVIVGA 197 (315)
T ss_dssp HHGGGCSEEEEEC
T ss_pred HHHHhCCEEEECc
Confidence 2234677776654
No 358
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=35.36 E-value=63 Score=23.11 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=26.6
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
|.+++.-+ .+.+ .+-+.+.+.+|+|++|+-|.+
T Consensus 11 Grs~eqK~----~L~~-~it~~l~~~lg~p~~~v~V~i 43 (76)
T 3ej9_A 11 GRTDEQKR----ALSA-GLLRVISEATGEPRENIFFVI 43 (76)
T ss_dssp TCCHHHHH----HHHH-HHHHHHHHHHCCCGGGCEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHHCcCcccEEEEE
Confidence 57777777 7777 678889999999999987654
No 359
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=35.32 E-value=39 Score=28.73 Aligned_cols=35 Identities=14% Similarity=0.090 Sum_probs=28.4
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 115 ~v~gk~VllV-DDvi~TG~--Tl~aa~~~L~~~Ga~~V 149 (211)
T 1pzm_A 115 SVENRHIMLV-EDIVDSAI--TLQYLMRFMLAKKPASL 149 (211)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHTTCCSEE
T ss_pred CCCCCEEEEE-CCccccHH--HHHHHHHHHHhcCCCEE
Confidence 4689998888 67777898 67789999999998743
No 360
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=35.29 E-value=1.2e+02 Score=25.29 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=24.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
++||++|+.. |+-=+=.++|+.|.+.|++|.++.
T Consensus 4 l~gk~vlVTG------as~gIG~a~a~~l~~~G~~V~~~~ 37 (247)
T 3rwb_A 4 LAGKTALVTG------AAQGIGKAIAARLAADGATVIVSD 37 (247)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEe
Confidence 6788777643 222355689999999999987765
No 361
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=35.11 E-value=1.7e+02 Score=24.89 Aligned_cols=66 Identities=15% Similarity=0.109 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH--------HhhccCEEEEech
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN--------TALKADLIVLNTA 159 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~--------~a~~~DLVIaNT~ 159 (282)
+=.++|+.|.+.|+.|++...+..+ -...+.+++...|..+. +-....+++ .....|.+|.|..
T Consensus 39 IG~aia~~la~~G~~Vv~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG 114 (267)
T 3u5t_A 39 IGAAIAARLASDGFTVVINYAGKAA----AAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAG 114 (267)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSCSH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5568899999999999887654432 11233455555554433 112222222 2247999999876
Q ss_pred hc
Q 023401 160 VA 161 (282)
Q Consensus 160 v~ 161 (282)
+.
T Consensus 115 ~~ 116 (267)
T 3u5t_A 115 IM 116 (267)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 362
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=35.06 E-value=68 Score=26.66 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=22.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCe-EEEE
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTK-VNWI 110 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~-V~vL 110 (282)
++++|-+|..+.+..--.-++-.+...+++.|++ +.+.
T Consensus 9 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 47 (277)
T 3hs3_A 9 KSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGYTALISF 47 (277)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCCCEEEEE
Confidence 4566777776665433334455566777777887 4443
No 363
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=34.93 E-value=52 Score=30.23 Aligned_cols=83 Identities=19% Similarity=0.133 Sum_probs=52.7
Q ss_pred EEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----------------------CchhhhhhhHHHHHHc-CCc
Q 023401 79 LVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----------------------EEDEVIYSLEHKMWDR-GVQ 135 (282)
Q Consensus 79 LISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----------------------~~~~v~~~L~~kll~r-gI~ 135 (282)
+|+.+-.+---|.-.++.++.|++.|+.|.-.+..++. ..+.....+.+.+.+. ++|
T Consensus 110 v~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP 189 (265)
T 1wv2_A 110 VLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVP 189 (265)
T ss_dssp CBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSC
T ss_pred eecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCC
Confidence 45555555678888899999999889888854433322 1111223445555554 788
Q ss_pred eeehhchhH---H--HHhhccCEEEEechhc
Q 023401 136 VISAKGQET---I--NTALKADLIVLNTAVA 161 (282)
Q Consensus 136 v~~~k~~~~---i--~~a~~~DLVIaNT~v~ 161 (282)
|+-+=+..+ . -+...+|-|++||++.
T Consensus 190 VI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 190 VLVDAGVGTASDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp BEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred EEEeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 886633222 1 1456799999999885
No 364
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=34.88 E-value=85 Score=30.42 Aligned_cols=47 Identities=17% Similarity=0.335 Sum_probs=30.7
Q ss_pred HHHHHHHHHhCCCeEEEEe-ccCCC-----------------CchhhhhhhHHHHHHcCCceeeh
Q 023401 93 LMELAFLLRGVGTKVNWIT-IQKPS-----------------EEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 93 LleLA~~Lkq~G~~V~vL~-~~~G~-----------------~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+.+-..+|++.|++.++|. .-..+ ++.+-+.-|.+++-++||.|+.|
T Consensus 174 i~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 238 (583)
T 1ea9_C 174 VIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLD 238 (583)
T ss_dssp HHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEE
T ss_pred HHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4455699999999999998 21111 12333445566666678888866
No 365
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=34.82 E-value=1.1e+02 Score=25.02 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=24.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|++|+||+.. -+| -+=.++++.|.+.|++|.++..
T Consensus 4 ~~~k~vlVtG----asg--giG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 4 LDGKVAIITG----GTL--GIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp TTTCEEEETT----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEEeC----CCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 5677766532 223 2556899999999999887763
No 366
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=34.79 E-value=1.4e+02 Score=24.55 Aligned_cols=87 Identities=11% Similarity=0.001 Sum_probs=47.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~D 152 (282)
++++|-+|..+.+..--.-++-.+-..+++.|+++.+.......+ .+- +.+. .+.+ ...++|
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~-~~~----~~~~------------~~~~-~~~~vd 65 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGGYPN-KSR----QEQQ------------LALC-TQWGAN 65 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSSTTC-HHH----HHHH------------HHHH-HHHTCS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCCCCC-HHH----HHHH------------HHHH-HHcCCC
Confidence 456777777766544333445556677778888888877543110 011 0011 1111 246788
Q ss_pred EEEEechhc---hHHHHHHhhccCCCCCCceEEE
Q 023401 153 LIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWW 183 (282)
Q Consensus 153 LVIaNT~v~---g~wl~~l~~~~~~~~~~pVIWW 183 (282)
.||+...-. ...++.+. .++ |||..
T Consensus 66 giii~~~~~~~~~~~~~~~~-~~i-----PvV~~ 93 (304)
T 3o1i_D 66 AIILGTVDPHAYEHNLKSWV-GNT-----PVFAT 93 (304)
T ss_dssp EEEECCSSTTSSTTTHHHHT-TTS-----CEEEC
T ss_pred EEEEeCCChhHHHHHHHHHc-CCC-----CEEEe
Confidence 888776543 34566664 455 66665
No 367
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=34.67 E-value=64 Score=23.42 Aligned_cols=37 Identities=24% Similarity=0.123 Sum_probs=26.1
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
+.|-....+++||+|..| |...-.+...|.+.|++|.
T Consensus 10 ~~~~~~~~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~ 46 (137)
T 2pln_A 10 HGSLVPRGSMRVLLIEKN------SVLGGEIEKGLNVKGFMAD 46 (137)
T ss_dssp -----CTTCSEEEEECSC------HHHHHHHHHHHHHTTCEEE
T ss_pred cCcccCCCCCeEEEEeCC------HHHHHHHHHHHHHcCcEEE
Confidence 344555678889999876 5677778889999999876
No 368
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=34.63 E-value=31 Score=29.58 Aligned_cols=42 Identities=14% Similarity=0.214 Sum_probs=27.6
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 66 ~~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
+.|....+||+||+.. |+-=+=.++|+.|.+.|++|.++...
T Consensus 6 ~~~~~~~~~k~vlVTG------as~GIG~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 6 HHHMEEFTDKVAIVTG------GSSGIGLAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp ----CTTTTCEEEESS------TTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccccCCCCCEEEEeC------CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4466677888877642 22335568899999999998887643
No 369
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=34.54 E-value=1.4e+02 Score=24.92 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=43.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||++|+.. -+|+ +=.++|+.|.+.|++|.++... .+ .. ..+.+++...|..+. +-....+++
T Consensus 7 l~~k~vlVTG----as~g--iG~~ia~~l~~~G~~V~~~~r~-~~---~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (260)
T 2ae2_A 7 LEGCTALVTG----GSRG--IGYGIVEELASLGASVYTCSRN-QK---EL-NDCLTQWRSKGFKVEASVCDLSSRSERQE 75 (260)
T ss_dssp CTTCEEEEES----CSSH--HHHHHHHHHHHTTCEEEEEESC-HH---HH-HHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCcH--HHHHHHHHHHHCCCEEEEEeCC-HH---HH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 5788776653 2222 5568899999999998877632 21 11 122344444443332 112222232
Q ss_pred -------Hh-hccCEEEEechh
Q 023401 147 -------TA-LKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a-~~~DLVIaNT~v 160 (282)
.. ..+|.+|.|..+
T Consensus 76 ~~~~~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 76 LMNTVANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHHHHHTTTCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCCEEEECCCC
Confidence 12 579999999865
No 370
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=34.52 E-value=57 Score=27.81 Aligned_cols=84 Identities=17% Similarity=0.194 Sum_probs=44.3
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC--Ccee--ehhch
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG--VQVI--SAKGQ 142 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rg--I~v~--~~k~~ 142 (282)
++..-+++|++|+..= +|..=+=.++|+.|.+.|+.|.++..... .+. .+++.+.+ +..+ +-...
T Consensus 19 ~~M~~l~~k~vlVTGa----sg~~GIG~~ia~~l~~~G~~V~~~~r~~~---~~~----~~~l~~~~~~~~~~~~Dl~~~ 87 (280)
T 3nrc_A 19 SHMGFLAGKKILITGL----LSNKSIAYGIAKAMHREGAELAFTYVGQF---KDR----VEKLCAEFNPAAVLPCDVISD 87 (280)
T ss_dssp ---CTTTTCEEEECCC----CSTTCHHHHHHHHHHHTTCEEEEEECTTC---HHH----HHHHHGGGCCSEEEECCTTCH
T ss_pred CcccccCCCEEEEECC----CCCCCHHHHHHHHHHHcCCEEEEeeCchH---HHH----HHHHHHhcCCceEEEeecCCH
Confidence 4455678887776431 10011446889999999999887764431 111 23443332 2222 11222
Q ss_pred hHHH--------HhhccCEEEEechhc
Q 023401 143 ETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 143 ~~i~--------~a~~~DLVIaNT~v~ 161 (282)
++++ ....+|.+|.|..+.
T Consensus 88 ~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 88 QEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 2222 124689999998764
No 371
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=34.44 E-value=1.9e+02 Score=23.70 Aligned_cols=37 Identities=14% Similarity=0.013 Sum_probs=18.0
Q ss_pred ccEEEEEecc-----CCCCCchHHHHHHHHHHHhCCCeEEEE
Q 023401 74 SKLVLLVSHE-----LSLSGGPLLLMELAFLLRGVGTKVNWI 110 (282)
Q Consensus 74 ~KkILLISHE-----Ls~TGAPLlLleLA~~Lkq~G~~V~vL 110 (282)
+++|-+|..+ .+..--.-++-.+...+++.|+++.+.
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~ 49 (292)
T 3k4h_A 8 TKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMS 49 (292)
T ss_dssp CCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 4455555554 333333334444455556666655543
No 372
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=34.42 E-value=42 Score=28.39 Aligned_cols=39 Identities=15% Similarity=0.071 Sum_probs=32.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++-.+..++++|+. |.-=+..++|..+|+.|++|+.+++
T Consensus 74 ~i~~~D~vii~S~S----g~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPD----TERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESC----SCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCC----CCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 67788888888874 4434667999999999999999997
No 373
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=34.40 E-value=1.7e+02 Score=24.43 Aligned_cols=79 Identities=13% Similarity=0.151 Sum_probs=44.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
++||++|+.. -+| =+=.++|+.|.+.|+.|.++... .+.- ..+.+++.+.|.++. +-....+++
T Consensus 5 ~~~k~vlVTG----as~--GIG~aia~~l~~~G~~V~~~~r~-~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 73 (252)
T 3h7a_A 5 PRNATVAVIG----AGD--YIGAEIAKKFAAEGFTVFAGRRN-GEKL----APLVAEIEAAGGRIVARSLDARNEDEVTA 73 (252)
T ss_dssp CCSCEEEEEC----CSS--HHHHHHHHHHHHTTCEEEEEESS-GGGG----HHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEeCC-HHHH----HHHHHHHHhcCCeEEEEECcCCCHHHHHH
Confidence 4567655542 222 25578999999999998777633 2211 123455555554433 112223332
Q ss_pred ---Hh---hccCEEEEechhc
Q 023401 147 ---TA---LKADLIVLNTAVA 161 (282)
Q Consensus 147 ---~a---~~~DLVIaNT~v~ 161 (282)
.+ ...|.+|.|..+.
T Consensus 74 ~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 74 FLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp HHHHHHHHSCEEEEEECCCCC
T ss_pred HHHHHHhhCCceEEEECCCcC
Confidence 11 4689999988753
No 374
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=34.37 E-value=97 Score=28.96 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=40.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
+|+|++| |+=..-+|+|..|.+.|.+|.++..... ..+.++...+++.+.++ |++...
T Consensus 174 ~k~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~ 234 (492)
T 3ic9_A 174 PKSVAVF-------GPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAK 234 (492)
T ss_dssp CSEEEEE-------SSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETT
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEEC
Confidence 6788888 3444678999999999999999874332 13455655666666655 776643
No 375
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=34.22 E-value=1.2e+02 Score=26.29 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=46.8
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhc-------hh
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKG-------QE 143 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k~-------~~ 143 (282)
|-++|+|.. |. -|-.|....++- ..+|+.+.+++++. +..+...+.|||++. .+. .+
T Consensus 4 riavl~Sg~----Gs--nl~ali~~~~~~~l~~eI~~Visn~~~a------~v~~~A~~~gIp~~~~~~~~~~~r~~~d~ 71 (211)
T 3p9x_A 4 RVAIFASGS----GT--NAEAIIQSQKAGQLPCEVALLITDKPGA------KVVERVKVHEIPVCALDPKTYPSKEAYEI 71 (211)
T ss_dssp EEEEECCTT----CH--HHHHHHHHHHTTCCSSEEEEEEESCSSS------HHHHHHHTTTCCEEECCGGGSSSHHHHHH
T ss_pred EEEEEEeCC----ch--HHHHHHHHHHcCCCCcEEEEEEECCCCc------HHHHHHHHcCCCEEEeChhhcCchhhhHH
Confidence 556777763 43 344555555442 35777777655531 446778888999862 211 12
Q ss_pred HH-H--HhhccCEEEEec---hhchHHHHHH
Q 023401 144 TI-N--TALKADLIVLNT---AVAGKWLDAV 168 (282)
Q Consensus 144 ~i-~--~a~~~DLVIaNT---~v~g~wl~~l 168 (282)
++ + ...++|+||+-. ++....++..
T Consensus 72 ~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~ 102 (211)
T 3p9x_A 72 EVVQQLKEKQIDFVVLAGYMRLVGPTLLGAY 102 (211)
T ss_dssp HHHHHHHHTTCCEEEESSCCSCCCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCchhhcCHHHHhhc
Confidence 22 2 356799999743 4445555544
No 376
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=34.06 E-value=76 Score=27.11 Aligned_cols=78 Identities=15% Similarity=0.094 Sum_probs=43.6
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC--Ccee--ehhchhHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG--VQVI--SAKGQETI 145 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rg--I~v~--~~k~~~~i 145 (282)
.-++||++|+.. -+| =+=.++|+.|.+.|+.|.++... .+ .+++...+.+ +..+ +-....++
T Consensus 12 ~~l~gk~vlVTG----as~--gIG~~~a~~L~~~G~~V~~~~r~-~~-------~~~~~~~~~~~~~~~~~~Dl~d~~~v 77 (291)
T 3rd5_A 12 PSFAQRTVVITG----ANS--GLGAVTARELARRGATVIMAVRD-TR-------KGEAAARTMAGQVEVRELDLQDLSSV 77 (291)
T ss_dssp CCCTTCEEEEEC----CSS--HHHHHHHHHHHHTTCEEEEEESC-HH-------HHHHHHTTSSSEEEEEECCTTCHHHH
T ss_pred cCCCCCEEEEeC----CCC--hHHHHHHHHHHHCCCEEEEEECC-HH-------HHHHHHHHhcCCeeEEEcCCCCHHHH
Confidence 346888777653 222 25578999999999998877633 21 1222222222 2222 11333344
Q ss_pred H----HhhccCEEEEechhc
Q 023401 146 N----TALKADLIVLNTAVA 161 (282)
Q Consensus 146 ~----~a~~~DLVIaNT~v~ 161 (282)
+ .....|.+|.|..+.
T Consensus 78 ~~~~~~~~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 78 RRFADGVSGADVLINNAGIM 97 (291)
T ss_dssp HHHHHTCCCEEEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCcCC
Confidence 3 223679999988764
No 377
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=34.02 E-value=50 Score=31.32 Aligned_cols=73 Identities=18% Similarity=0.192 Sum_probs=38.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc--CCcee--ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR--GVQVI--SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r--gI~v~--~~k~~~~i~- 146 (282)
|++|+|+++. .+..|. .+++.|.+.|++|.+.. +..+ . .+++.+. ++..+ +......+.
T Consensus 1 M~~k~VlViG--aG~iG~-----~ia~~L~~~G~~V~v~~-R~~~---~-----a~~la~~~~~~~~~~~Dv~d~~~l~~ 64 (450)
T 1ff9_A 1 MATKSVLMLG--SGFVTR-----PTLDVLTDSGIKVTVAC-RTLE---S-----AKKLSAGVQHSTPISLDVNDDAALDA 64 (450)
T ss_dssp -CCCEEEEEC--CSTTHH-----HHHHHHHTTTCEEEEEE-SSHH---H-----HHHTTTTCTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC--CCHHHH-----HHHHHHHhCcCEEEEEE-CCHH---H-----HHHHHHhcCCceEEEeecCCHHHHHH
Confidence 6789999986 555555 35566778899865544 3221 0 1222221 12221 112223333
Q ss_pred HhhccCEEEEechh
Q 023401 147 TALKADLIVLNTAV 160 (282)
Q Consensus 147 ~a~~~DLVIaNT~v 160 (282)
...++|+||.||-.
T Consensus 65 ~l~~~DvVIn~a~~ 78 (450)
T 1ff9_A 65 EVAKHDLVISLIPY 78 (450)
T ss_dssp HHTTSSEEEECCC-
T ss_pred HHcCCcEEEECCcc
Confidence 34579999988865
No 378
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=33.92 E-value=1.1e+02 Score=24.80 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=24.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
+++|+||+. +-+| -+=.++++.|.+.|++|.++..
T Consensus 5 ~~~~~vlVt----Gasg--giG~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVT----GSTR--GIGRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp CTTCEEEET----TCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEE----CCCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 467766553 2233 3567889999999999888764
No 379
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=33.90 E-value=1.4e+02 Score=24.60 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=23.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
++||++|+.. |+.=+=.++|+.|.+.|++|.++.
T Consensus 7 l~~k~vlITG------as~gIG~~~a~~l~~~G~~V~~~~ 40 (261)
T 3n74_A 7 LEGKVALITG------AGSGFGEGMAKRFAKGGAKVVIVD 40 (261)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEEC------CCchHHHHHHHHHHHCCCEEEEEc
Confidence 4677666542 222245689999999999987776
No 380
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=33.71 E-value=1.4e+02 Score=24.49 Aligned_cols=79 Identities=20% Similarity=0.292 Sum_probs=44.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
+++|++|+.. |+.=+=.++|+.|.+.|++|.++... .+ -...+.+++.+.|.++. +-...++++
T Consensus 3 l~~k~vlITG------as~gIG~~~a~~l~~~G~~v~~~~r~-~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (247)
T 3lyl_A 3 LNEKVALVTG------ASRGIGFEVAHALASKGATVVGTATS-QA----SAEKFENSMKEKGFKARGLVLNISDIESIQN 71 (247)
T ss_dssp TTTCEEEESS------CSSHHHHHHHHHHHHTTCEEEEEESS-HH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC------CCChHHHHHHHHHHHCCCEEEEEeCC-HH----HHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 3567665532 22335568999999999998777632 21 11234555655554432 112222332
Q ss_pred ---H----hhccCEEEEechhc
Q 023401 147 ---T----ALKADLIVLNTAVA 161 (282)
Q Consensus 147 ---~----a~~~DLVIaNT~v~ 161 (282)
. ....|.||.|..+.
T Consensus 72 ~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 72 FFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHHHHHTTCCCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 1 23589999998753
No 381
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=33.66 E-value=2.2e+02 Score=24.15 Aligned_cols=78 Identities=12% Similarity=0.017 Sum_probs=42.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH---HcCCceee--hhchhHHHH
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW---DRGVQVIS--AKGQETINT 147 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll---~rgI~v~~--~k~~~~i~~ 147 (282)
++|+||+.. -|| -+=.++++.|.+.|++|.++...... ..+. .+++. ..++..+. -....++..
T Consensus 4 ~~~~vlVTG----atG--~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (341)
T 3enk_A 4 TKGTILVTG----GAG--YIGSHTAVELLAHGYDVVIADNLVNS-KREA----IARIEKITGKTPAFHETDVSDERALAR 72 (341)
T ss_dssp SSCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEECCCSSS-CTHH----HHHHHHHHSCCCEEECCCTTCHHHHHH
T ss_pred CCcEEEEec----CCc--HHHHHHHHHHHHCCCcEEEEecCCcc-hHHH----HHHHHhhcCCCceEEEeecCCHHHHHH
Confidence 345665542 223 35568899999999999888743322 1222 22222 22444432 123334442
Q ss_pred -hh--ccCEEEEechhc
Q 023401 148 -AL--KADLIVLNTAVA 161 (282)
Q Consensus 148 -a~--~~DLVIaNT~v~ 161 (282)
.. .+|.||-|....
T Consensus 73 ~~~~~~~d~vih~A~~~ 89 (341)
T 3enk_A 73 IFDAHPITAAIHFAALK 89 (341)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHhccCCcEEEECcccc
Confidence 22 699999887653
No 382
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=33.63 E-value=1.3e+02 Score=24.87 Aligned_cols=74 Identities=20% Similarity=0.144 Sum_probs=43.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccCE
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~DL 153 (282)
.|+|+++-.|-. ..+-+......|+..|+++.++...+|.. ..+. ...|+.+..+.....++ ..++|.
T Consensus 2 ~~kV~ill~~g~---~~~e~~~~~~~l~~ag~~v~~vs~~~~~~-~~v~-------~~~g~~v~~~~~l~~~~-~~~~D~ 69 (205)
T 2ab0_A 2 SASALVCLAPGS---EETEAVTTIDLLVRGGIKVTTASVASDGN-LAIT-------CSRGVKLLADAPLVEVA-DGEYDV 69 (205)
T ss_dssp CCEEEEEECTTC---CHHHHHHHHHHHHHTTCEEEEEECSSTTC-CEEE-------CTTSCEEECSEEHHHHT-TSCCSE
T ss_pred CcEEEEEEcCCC---cHHHHHHHHHHHHHCCCEEEEEeCCCCCC-ceee-------cCCCeEEecCCCHHHCC-cccCCE
Confidence 356766665522 23444555678999999999998655410 0121 13467666654433332 367999
Q ss_pred EEEech
Q 023401 154 IVLNTA 159 (282)
Q Consensus 154 VIaNT~ 159 (282)
||+=-.
T Consensus 70 livpGG 75 (205)
T 2ab0_A 70 IVLPGG 75 (205)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 987544
No 383
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=33.63 E-value=42 Score=35.03 Aligned_cols=26 Identities=27% Similarity=0.707 Sum_probs=19.9
Q ss_pred cccccccccchhhHHHHHHhhh-hhcCCCC
Q 023401 201 PLVAGAMIDSHVTAEYWKNRTR-ERLRIKM 229 (282)
Q Consensus 201 ~~v~~~~~dS~Ata~~w~~~~~-~~l~Ikl 229 (282)
|.|..+|+|+ +.||.+.++ |..++-+
T Consensus 597 p~Vr~~i~d~---l~~Wl~e~gVDGfR~Da 623 (921)
T 2wan_A 597 PMAQKFVLDS---VNYWVNEYHVDGFRFDL 623 (921)
T ss_dssp HHHHHHHHHH---HHHHHHHHCCCEEEETT
T ss_pred HHHHHHHHHH---HHHHHHHcCCCEEEecc
Confidence 5666677764 799999887 8777776
No 384
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=33.62 E-value=75 Score=27.53 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=24.6
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 68 ~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
+..-++||++|+..=--+ .=+=.++|+.|.+.|+.|.++.
T Consensus 25 ~~~~l~gk~~lVTGasg~----~GIG~aia~~la~~G~~V~~~~ 64 (293)
T 3grk_A 25 QSGLLQGKRGLILGVANN----RSIAWGIAKAAREAGAELAFTY 64 (293)
T ss_dssp --CTTTTCEEEEECCCSS----SSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCCEEEEEcCCCC----CcHHHHHHHHHHHCCCEEEEEc
Confidence 334478887776432110 1134578899999999987765
No 385
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=33.56 E-value=1e+02 Score=23.90 Aligned_cols=78 Identities=22% Similarity=0.202 Sum_probs=48.0
Q ss_pred CchHHHHHHHHHHHhCCCeEEEEeccCCCC-----------------chhhhhhhHHHHHHcCCceeehhchhHHH----
Q 023401 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSE-----------------EDEVIYSLEHKMWDRGVQVISAKGQETIN---- 146 (282)
Q Consensus 88 GAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-----------------~~~v~~~L~~kll~rgI~v~~~k~~~~i~---- 146 (282)
||=..=+++|..|.+.|.+|.++-...+.. ..++...+.+.+.+.|+++... .-..+.
T Consensus 8 GgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~ 86 (180)
T 2ywl_A 8 GGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGG 86 (180)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC
Confidence 333456799999999999999997443211 2455666777777778877654 111111
Q ss_pred -----H---hhccCEEEEechhchHHHH
Q 023401 147 -----T---ALKADLIVLNTAVAGKWLD 166 (282)
Q Consensus 147 -----~---a~~~DLVIaNT~v~g~wl~ 166 (282)
+ ...+|.||.-|-....+.+
T Consensus 87 ~~~v~~~~g~i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 87 VFEVETEEGVEKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp SEEEECSSCEEEEEEEEECCTTCCHHHH
T ss_pred EEEEEECCCEEEECEEEECCCCCCCccc
Confidence 1 1247777777776554333
No 386
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=33.53 E-value=68 Score=21.78 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=24.9
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
+.+++.-+ .+.+ .+-+.+.+.+|+|++|+.|.+
T Consensus 9 grt~eqK~----~L~~-~it~~~~~~lg~~~~~v~V~i 41 (62)
T 3m20_A 9 KLDVGKKR----EFVE-RLTSVAAEIYGMDRSAITILI 41 (62)
T ss_dssp CCCHHHHH----HHHH-HHHHHHHHHHTCCTTSCEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHhCcCcceEEEEE
Confidence 45666655 6666 577788899999999987754
No 387
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=33.52 E-value=1.8e+02 Score=27.93 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=49.4
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hhchhHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AKGQETI 145 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~----~k~~~~i 145 (282)
.|-.+|+||+.. -+|+ +=.++++.|.+.|+..++++++.++.... ...+.+++...|.++.. -....++
T Consensus 255 ~~~~~~~vLITG----gtGg--IG~~lA~~La~~G~~~vvl~~R~~~~~~~-~~~l~~~l~~~g~~v~~~~~Dvtd~~~v 327 (511)
T 2z5l_A 255 SWQPSGTVLITG----GMGA--IGRRLARRLAAEGAERLVLTSRRGPEAPG-AAELAEELRGHGCEVVHAACDVAERDAL 327 (511)
T ss_dssp CCCCCSEEEEET----TTSH--HHHHHHHHHHHTTCSEEEEEESSGGGSTT-HHHHHHHHHTTTCEEEEEECCSSCHHHH
T ss_pred CcCCCCEEEEEC----CCCH--HHHHHHHHHHhCCCcEEEEEecCCcccHH-HHHHHHHHHhcCCEEEEEEeCCCCHHHH
Confidence 466677666653 3444 66788999999999766666555431111 12344566666755432 1233344
Q ss_pred HH-h--hccCEEEEechhc
Q 023401 146 NT-A--LKADLIVLNTAVA 161 (282)
Q Consensus 146 ~~-a--~~~DLVIaNT~v~ 161 (282)
.. . ..+|.||-|..+.
T Consensus 328 ~~~~~~~~ld~VVh~AGv~ 346 (511)
T 2z5l_A 328 AALVTAYPPNAVFHTAGIL 346 (511)
T ss_dssp HHHHHHSCCSEEEECCCCC
T ss_pred HHHHhcCCCcEEEECCccc
Confidence 32 2 3599999987654
No 388
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=33.50 E-value=1e+02 Score=22.11 Aligned_cols=32 Identities=25% Similarity=0.190 Sum_probs=21.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
..+||+|..+ |...-.+...|.+.|+++...+
T Consensus 9 ~~~iLivdd~------~~~~~~l~~~L~~~g~~v~~~~ 40 (140)
T 3cg0_A 9 LPGVLIVEDG------RLAAATLRIQLESLGYDVLGVF 40 (140)
T ss_dssp CCEEEEECCB------HHHHHHHHHHHHHHTCEEEEEE
T ss_pred CceEEEEECC------HHHHHHHHHHHHHCCCeeEEEE
Confidence 4568888766 5666677777777787766433
No 389
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=33.47 E-value=1.4e+02 Score=21.77 Aligned_cols=71 Identities=20% Similarity=0.241 Sum_probs=41.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh--hchhHHHH--h
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA--KGQETINT--A 148 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~--k~~~~i~~--a 148 (282)
+++|++++ ++..| ..+++.|.+.|++|.++... + +. .+++.+ .|+.++.. .....+.. .
T Consensus 4 ~m~i~IiG--~G~iG-----~~~a~~L~~~g~~v~~~d~~-~----~~----~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 67 (140)
T 1lss_A 4 GMYIIIAG--IGRVG-----YTLAKSLSEKGHDIVLIDID-K----DI----CKKASAEIDALVINGDCTKIKTLEDAGI 67 (140)
T ss_dssp -CEEEEEC--CSHHH-----HHHHHHHHHTTCEEEEEESC-H----HH----HHHHHHHCSSEEEESCTTSHHHHHHTTT
T ss_pred CCEEEEEC--CCHHH-----HHHHHHHHhCCCeEEEEECC-H----HH----HHHHHHhcCcEEEEcCCCCHHHHHHcCc
Confidence 45788875 23334 45788888899998877532 2 11 234443 37765532 22233331 4
Q ss_pred hccCEEEEechh
Q 023401 149 LKADLIVLNTAV 160 (282)
Q Consensus 149 ~~~DLVIaNT~v 160 (282)
.++|.||..|-.
T Consensus 68 ~~~d~vi~~~~~ 79 (140)
T 1lss_A 68 EDADMYIAVTGK 79 (140)
T ss_dssp TTCSEEEECCSC
T ss_pred ccCCEEEEeeCC
Confidence 679999998753
No 390
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=33.45 E-value=2e+02 Score=23.72 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=24.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
++++|-+|..+.+..--.-++-.+...+++.|+++.+..
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~ 45 (285)
T 3c3k_A 7 KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCN 45 (285)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence 456777777665433222344555677888899887765
No 391
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=33.25 E-value=1.9e+02 Score=25.70 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=48.0
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc-CCCCchhhhhhhHHHHHHcCCceeehhchhHH
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ-KPSEEDEVIYSLEHKMWDRGVQVISAKGQETI 145 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~-~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i 145 (282)
+..+|.+....+ ++|..|. ..+.+++.+.+.|..+.+++.. .|..+|. .+..++.+.||++..-...-.-
T Consensus 102 ~a~~~I~~g~~I-lT~~~s~-----Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~---~~a~~L~~~gI~vtli~dsa~~ 172 (276)
T 1vb5_A 102 IGAQLIDDGDVI-ITHSFSS-----TVLEIIRTAKERKKRFKVILTESSPDYEGL---HLARELEFSGIEFEVITDAQMG 172 (276)
T ss_dssp HHHHHCCTTEEE-ECCSCCH-----HHHHHHHHHHHTTCCEEEEEECCTTTTHHH---HHHHHHHHTTCCEEEECGGGHH
T ss_pred HHHHHccCCCEE-EEeCCCh-----HHHHHHHHHHHcCCeEEEEEeCCCcchhhH---HHHHHHHHCCCCEEEEcHHHHH
Confidence 566677655443 4687764 3445667777777777777744 3333442 3567777789998744211111
Q ss_pred HHhhccCEEEEe
Q 023401 146 NTALKADLIVLN 157 (282)
Q Consensus 146 ~~a~~~DLVIaN 157 (282)
....++|.||+.
T Consensus 173 ~~m~~vd~vivG 184 (276)
T 1vb5_A 173 LFCREASIAIVG 184 (276)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHccCCEEEEc
Confidence 123567777654
No 392
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=33.22 E-value=1.7e+02 Score=25.43 Aligned_cols=81 Identities=14% Similarity=0.231 Sum_probs=46.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHh-CCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--h-------chhH
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--K-------GQET 144 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq-~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k-------~~~~ 144 (282)
|.++|+|-. | --|-.|....++ .+++|+.+.+++++. ++ .+...+.|||++.- + ..++
T Consensus 7 riavl~SG~----G--snl~all~~~~~~~~~eI~~Vis~~~~a-----~~-~~~A~~~gIp~~~~~~~~~~~r~~~d~~ 74 (215)
T 3tqr_A 7 PIVVLISGN----G--TNLQAIIGAIQKGLAIEIRAVISNRADA-----YG-LKRAQQADIPTHIIPHEEFPSRTDFEST 74 (215)
T ss_dssp EEEEEESSC----C--HHHHHHHHHHHTTCSEEEEEEEESCTTC-----HH-HHHHHHTTCCEEECCGGGSSSHHHHHHH
T ss_pred EEEEEEeCC----c--HHHHHHHHHHHcCCCCEEEEEEeCCcch-----HH-HHHHHHcCCCEEEeCccccCchhHhHHH
Confidence 445777643 3 356666666665 367888777655531 11 35677789999751 1 1222
Q ss_pred H-H--HhhccCEEEEec---hhchHHHHH
Q 023401 145 I-N--TALKADLIVLNT---AVAGKWLDA 167 (282)
Q Consensus 145 i-~--~a~~~DLVIaNT---~v~g~wl~~ 167 (282)
+ + ...++|+|++-. ++....++.
T Consensus 75 ~~~~l~~~~~Dliv~agy~~il~~~~l~~ 103 (215)
T 3tqr_A 75 LQKTIDHYDPKLIVLAGFMRKLGKAFVSH 103 (215)
T ss_dssp HHHHHHTTCCSEEEESSCCSCCCHHHHHH
T ss_pred HHHHHHhcCCCEEEEccchhhCCHHHHhh
Confidence 2 2 356799999743 333444443
No 393
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=33.19 E-value=51 Score=29.52 Aligned_cols=33 Identities=18% Similarity=0.068 Sum_probs=22.3
Q ss_pred cEEEEEeccCCCCCc--hHHHHHHHHHHHhCCCeEEEEecc
Q 023401 75 KLVLLVSHELSLSGG--PLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 75 KkILLISHELs~TGA--PLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
|+||+|. |. |----.+...|++.|++|..+...
T Consensus 5 ~~vLiV~------g~~~~~~a~~l~~aL~~~g~~V~~i~~~ 39 (259)
T 3rht_A 5 TRVLYCG------DTSLETAAGYLAGLMTSWQWEFDYIPSH 39 (259)
T ss_dssp -CEEEEE------SSCTTTTHHHHHHHHHHTTCCCEEECTT
T ss_pred ceEEEEC------CCCchhHHHHHHHHHHhCCceEEEeccc
Confidence 6899993 22 223355677888999999998833
No 394
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=33.09 E-value=1.5e+02 Score=24.67 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=24.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++||++|+.. -+|+ +=.++++.|.+.|++|.++..
T Consensus 5 l~~k~vlVTG----as~g--IG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 5 IQGKLAVVTA----GSSG--LGFASALELARNGARLLLFSR 39 (260)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCch--HHHHHHHHHHHCCCEEEEEeC
Confidence 5677666543 2222 456889999999999887763
No 395
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=32.95 E-value=1.4e+02 Score=22.40 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=26.7
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
.-+...+||+|..| |...-.+...|++.|++++..+
T Consensus 32 ~~~~~~~Ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 67 (157)
T 3hzh_A 32 DTGIPFNVLIVDDS------VFTVKQLTQIFTSEGFNIIDTA 67 (157)
T ss_dssp TTTEECEEEEECSC------HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCceEEEEEeCC------HHHHHHHHHHHHhCCCeEEEEE
Confidence 34456789999765 5677788889999999886344
No 396
>1oao_A CODH, carbon monoxide dehydrogenase/acetyl-COA synthase beta; oxidoreductase-transferase complex, electron transfer, oxidoreductase; 1.90A {Moorella thermoacetica} SCOP: e.26.1.2 PDB: 1mjg_A 2z8y_A 3i01_A 3i04_A
Probab=32.94 E-value=61 Score=33.41 Aligned_cols=74 Identities=14% Similarity=0.227 Sum_probs=53.8
Q ss_pred cccccc--ccEEEEEeccCCCCCchHHHHHHHHHHH----------hCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCc
Q 023401 68 PLSFMK--SKLVLLVSHELSLSGGPLLLMELAFLLR----------GVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ 135 (282)
Q Consensus 68 ~~~f~~--~KkILLISHELs~TGAPLlLleLA~~Lk----------q~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~ 135 (282)
+++-++ ++.||+..|| |..+-+|.+..+ ..|++|.=+++-++ +-+-++|+|
T Consensus 267 nlGv~~~d~~nIlV~GHd------~~~~e~ll~~tee~~~~Ak~~GakGInvyG~CCT~~-----------EmL~~hg~p 329 (674)
T 1oao_A 267 NMGVLDPDQVNFVLHGHN------PLLSEIIVQAAREMEGEAKAAGAKGINLVGICCTGN-----------EVLMRQGIP 329 (674)
T ss_dssp SGGGCCTTSEEEEEESSC------HHHHHHHHHHHHHTHHHHHHTTCSCEEEEEEHHHHH-----------HHHHHHCCC
T ss_pred CCcccCCCCCEEEEECCC------cHHHHHHHHHHHHHHHHHHhcCCCccEEEeeeccHH-----------HHhhhcCCC
Confidence 455566 8999999998 567777777777 66777777776655 223446999
Q ss_pred eeehhchhHHHHh-hccCEEEEec
Q 023401 136 VISAKGQETINTA-LKADLIVLNT 158 (282)
Q Consensus 136 v~~~k~~~~i~~a-~~~DLVIaNT 158 (282)
..-..+++++..+ .-.|+|++.|
T Consensus 330 l~GN~~~qE~~~~tGavDaiv~d~ 353 (674)
T 1oao_A 330 LVTSFASQELAICTGAIDAMCVDV 353 (674)
T ss_dssp EEECGGGHHHHHTTSCCSEEEECS
T ss_pred cCCchHHHHHhhcCCCCceEEEEC
Confidence 8888888877644 4469998765
No 397
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=32.84 E-value=76 Score=31.92 Aligned_cols=53 Identities=21% Similarity=0.258 Sum_probs=38.0
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 023401 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 68 ~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~ 137 (282)
.|-|+-..+-+|||= -+-+| +.++|+.|.+.|+++.--. | ..+-|.+.||++.
T Consensus 17 ~~~~~~~i~raLISV-~DK~g----lv~~Ak~L~~lGfeI~ATg---G---------Tak~L~e~GI~v~ 69 (534)
T 4ehi_A 17 NLYFQSNAMRALLSV-SDKEG----IVEFGKELENLGFEILSTG---G---------TFKLLKENGIKVI 69 (534)
T ss_dssp GEEECTTCCEEEEEE-SSCTT----HHHHHHHHHHTTCEEEECH---H---------HHHHHHHTTCCCE
T ss_pred eeeeccCCcEEEEEE-ccccc----HHHHHHHHHHCCCEEEEcc---H---------HHHHHHHCCCcee
Confidence 567777777677776 35666 6899999999999976433 3 3556666788865
No 398
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=32.80 E-value=1e+02 Score=25.91 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=40.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee--ehhchhHHH-Hh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SAKGQETIN-TA 148 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~--~~k~~~~i~-~a 148 (282)
|++|+||+.. -||. +=.++++.|.+.|++|.++........ ..++..+ +-....++. ..
T Consensus 1 m~~k~vlVTG----asg~--IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~ 62 (267)
T 3rft_A 1 MAMKRLLVTG----AAGQ--LGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMV 62 (267)
T ss_dssp CCEEEEEEES----TTSH--HHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEEC----CCCH--HHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHH
Confidence 4567666542 2232 556889999999999888774432110 1223332 112333443 45
Q ss_pred hccCEEEEechh
Q 023401 149 LKADLIVLNTAV 160 (282)
Q Consensus 149 ~~~DLVIaNT~v 160 (282)
..+|.||-|..+
T Consensus 63 ~~~D~vi~~Ag~ 74 (267)
T 3rft_A 63 AGCDGIVHLGGI 74 (267)
T ss_dssp TTCSEEEECCSC
T ss_pred cCCCEEEECCCC
Confidence 679999988654
No 399
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=32.71 E-value=2.1e+02 Score=26.17 Aligned_cols=81 Identities=16% Similarity=0.102 Sum_probs=49.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHHhh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~~~k~~~~i~~a~ 149 (282)
.+|++|.+|..--|+ +.-.++..+...|.+|.+.+-++=...+++..-+++...+.|..+ ..+ . -+...
T Consensus 146 l~gl~va~vGD~~~r-----va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d--~--~eav~ 216 (307)
T 2i6u_A 146 LRGLRLSYFGDGANN-----MAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTAD--A--HAAAA 216 (307)
T ss_dssp CTTCEEEEESCTTSH-----HHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESC--H--HHHHT
T ss_pred cCCeEEEEECCCCcC-----cHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEEC--H--HHHhc
Confidence 579999999873133 445666666677999999883322223334333333344667544 333 1 12467
Q ss_pred ccCEEEEechhc
Q 023401 150 KADLIVLNTAVA 161 (282)
Q Consensus 150 ~~DLVIaNT~v~ 161 (282)
++|.|+..+.+.
T Consensus 217 ~aDvvy~~~w~s 228 (307)
T 2i6u_A 217 GADVLVTDTWTS 228 (307)
T ss_dssp TCSEEEECCSSC
T ss_pred CCCEEEecceec
Confidence 899999988763
No 400
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=32.69 E-value=82 Score=26.68 Aligned_cols=82 Identities=15% Similarity=0.095 Sum_probs=45.9
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH---cCCcee--eh-hch
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD---RGVQVI--SA-KGQ 142 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~---rgI~v~--~~-k~~ 142 (282)
..++++|+||+.+ -|| -+=-++++.|.+.|++|..+..... .. ..+.+.+.. .++..+ -| ...
T Consensus 6 ~~~~~~~~vlVTG----atG--~iG~~l~~~L~~~g~~V~~~~r~~~----~~-~~~~~~~~~~~~~~~~~~~~~D~~d~ 74 (342)
T 1y1p_A 6 AVLPEGSLVLVTG----ANG--FVASHVVEQLLEHGYKVRGTARSAS----KL-ANLQKRWDAKYPGRFETAVVEDMLKQ 74 (342)
T ss_dssp CSSCTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESSHH----HH-HHHHHHHHHHSTTTEEEEECSCTTST
T ss_pred ccCCCCCEEEEEC----Ccc--HHHHHHHHHHHHCCCEEEEEeCCcc----cH-HHHHHHhhccCCCceEEEEecCCcCh
Confidence 4578899887652 233 3567888999999999988874311 10 112222221 234333 12 222
Q ss_pred hHHH-HhhccCEEEEechhc
Q 023401 143 ETIN-TALKADLIVLNTAVA 161 (282)
Q Consensus 143 ~~i~-~a~~~DLVIaNT~v~ 161 (282)
.++. ...++|.||-|....
T Consensus 75 ~~~~~~~~~~d~vih~A~~~ 94 (342)
T 1y1p_A 75 GAYDEVIKGAAGVAHIASVV 94 (342)
T ss_dssp TTTTTTTTTCSEEEECCCCC
T ss_pred HHHHHHHcCCCEEEEeCCCC
Confidence 3333 344799999887543
No 401
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=32.68 E-value=2e+02 Score=27.11 Aligned_cols=78 Identities=12% Similarity=0.135 Sum_probs=47.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhcc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~ 151 (282)
.+|++|.+|++- |+ +.-.++..+...|.+|.+.+-++=...+++...+.+...+.|..+......+ ...++
T Consensus 151 l~glkva~vGD~-~r-----va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~---av~~a 221 (355)
T 4a8p_A 151 LEDCKVVFVGDA-TQ-----VCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS---SVEGA 221 (355)
T ss_dssp GGGCEEEEESCC-CH-----HHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG---GGTTC
T ss_pred CCCCEEEEECCC-ch-----hHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH---HHcCC
Confidence 689999999964 54 3445556666679999998833222234443333333445575543221122 46789
Q ss_pred CEEEEec
Q 023401 152 DLIVLNT 158 (282)
Q Consensus 152 DLVIaNT 158 (282)
|.|+..+
T Consensus 222 DVVytd~ 228 (355)
T 4a8p_A 222 DFLYTDV 228 (355)
T ss_dssp SEEEECC
T ss_pred CEEEecc
Confidence 9999754
No 402
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=32.60 E-value=84 Score=26.61 Aligned_cols=70 Identities=16% Similarity=0.300 Sum_probs=34.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce---eeh---hchhHHHH
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV---ISA---KGQETINT 147 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v---~~~---k~~~~i~~ 147 (282)
|+.+||- ++..|+. ++...+. .|..|.+++ .+ - .-++..+.++|-.- +.. +....+..
T Consensus 108 G~illLD---LD~~~~~----~i~~~l~-~~~tI~i~t---h~-~----~~l~~Rl~~rG~~~~e~i~~rl~~a~~e~~~ 171 (219)
T 1s96_A 108 GVDVFLD---IDWQGAQ----QIRQKMP-HARSIFILP---PS-K----IELDRRLRGRGQDSEEVIAKRMAQAVAEMSH 171 (219)
T ss_dssp TCEEEEE---CCHHHHH----HHHHHCT-TCEEEEEEC---SS-H----HHHHHHHHTTSCSCHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEE---ECHHHHH----HHHHHcc-CCEEEEEEC---CC-H----HHHHHHHHHcCCCCHHHHHHHHHHHHHHHhh
Confidence 5555554 6655554 3344444 366555555 11 1 13466677777210 000 11112223
Q ss_pred hhccCEEEEech
Q 023401 148 ALKADLIVLNTA 159 (282)
Q Consensus 148 a~~~DLVIaNT~ 159 (282)
...||.||.|.-
T Consensus 172 ~~~~d~~i~Nd~ 183 (219)
T 1s96_A 172 YAEYDYLIVNDD 183 (219)
T ss_dssp GGGSSEEEECSS
T ss_pred ccCCCEEEECcC
Confidence 467999999964
No 403
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=32.56 E-value=64 Score=29.04 Aligned_cols=73 Identities=22% Similarity=0.235 Sum_probs=44.8
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHh
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTA 148 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a 148 (282)
++-+++++|.+|+ ++.-|. .+|..|++.|++|.+.. +.++ ...+...+.|+.+. + .. ..+
T Consensus 11 ~~~l~~~~I~IIG--~G~mG~-----alA~~L~~~G~~V~~~~-~~~~-------~~~~~a~~~G~~~~-~-~~---e~~ 70 (338)
T 1np3_A 11 LSIIQGKKVAIIG--YGSQGH-----AHACNLKDSGVDVTVGL-RSGS-------ATVAKAEAHGLKVA-D-VK---TAV 70 (338)
T ss_dssp HHHHHTSCEEEEC--CSHHHH-----HHHHHHHHTTCCEEEEC-CTTC-------HHHHHHHHTTCEEE-C-HH---HHH
T ss_pred cchhcCCEEEEEC--chHHHH-----HHHHHHHHCcCEEEEEE-CChH-------HHHHHHHHCCCEEc-c-HH---HHH
Confidence 3456788999996 333344 46778889999876543 3331 11345556687654 2 11 245
Q ss_pred hccCEEEEechhc
Q 023401 149 LKADLIVLNTAVA 161 (282)
Q Consensus 149 ~~~DLVIaNT~v~ 161 (282)
.++|+||..+=..
T Consensus 71 ~~aDvVilavp~~ 83 (338)
T 1np3_A 71 AAADVVMILTPDE 83 (338)
T ss_dssp HTCSEEEECSCHH
T ss_pred hcCCEEEEeCCcH
Confidence 6899999987654
No 404
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=32.56 E-value=1.2e+02 Score=25.29 Aligned_cols=40 Identities=8% Similarity=0.013 Sum_probs=27.5
Q ss_pred cccEEEEEeccCCCCCch-HHHHHHHHHHHhCCCeEEEEec
Q 023401 73 KSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 73 ~~KkILLISHELs~TGAP-LlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++++|-+|..+.+..--. -++-.+...+++.|+++.+...
T Consensus 12 ~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 52 (301)
T 3miz_A 12 RSNTFGIITDYVSTTPYSVDIVRGIQDWANANGKTILIANT 52 (301)
T ss_dssp CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 456777777776655444 5666677888888888877663
No 405
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.53 E-value=1.2e+02 Score=24.40 Aligned_cols=35 Identities=11% Similarity=-0.043 Sum_probs=23.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCC--CeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G--~~V~vL~~ 112 (282)
|++|+||+.. -+| -+=.++++.|.+.| +.|.++..
T Consensus 1 m~~k~vlItG----asg--giG~~la~~l~~~g~~~~V~~~~r 37 (250)
T 1yo6_A 1 MSPGSVVVTG----ANR--GIGLGLVQQLVKDKNIRHIIATAR 37 (250)
T ss_dssp CCCSEEEESS----CSS--HHHHHHHHHHHTCTTCCEEEEEES
T ss_pred CCCCEEEEec----CCc--hHHHHHHHHHHhcCCCcEEEEEec
Confidence 5677666532 223 25568999999999 88887764
No 406
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=32.49 E-value=2.4e+02 Score=24.53 Aligned_cols=89 Identities=13% Similarity=0.152 Sum_probs=48.2
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-----CchhhhhhhHHHHHHcCCceeeh--
Q 023401 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-----EEDEVIYSLEHKMWDRGVQVISA-- 139 (282)
Q Consensus 67 ~~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-----~~~~v~~~L~~kll~rgI~v~~~-- 139 (282)
....-++||.+|+.. |+.=+=.++|+.|.+.|++|+++....+. ...+-...+.+++...|..+...
T Consensus 20 ~~m~~l~gk~vlVTG------as~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (322)
T 3qlj_A 20 GSMGVVDGRVVIVTG------AGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGS 93 (322)
T ss_dssp --CCTTTTCEEEETT------TTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECC
T ss_pred chhcccCCCEEEEEC------CCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEEC
Confidence 344557888666521 22335578999999999999887643110 00111223455565555444321
Q ss_pred --hchhHHH--------HhhccCEEEEechhc
Q 023401 140 --KGQETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 140 --k~~~~i~--------~a~~~DLVIaNT~v~ 161 (282)
....+++ ....+|.+|.|..+.
T Consensus 94 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 125 (322)
T 3qlj_A 94 NVADWDQAAGLIQTAVETFGGLDVLVNNAGIV 125 (322)
T ss_dssp CTTSHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 2222222 224789999887753
No 407
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=32.46 E-value=56 Score=28.24 Aligned_cols=37 Identities=35% Similarity=0.452 Sum_probs=29.3
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
..-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 137 ~~~~~Gk~VLIV-DDii~TG~--Tl~~a~~~L~~~ga~~V 173 (233)
T 1fsg_A 137 LSIFRDKHVLIV-EDIVDTGF--TLTEFGERLKAVGPKSM 173 (233)
T ss_dssp GGGGTTCEEEEE-EEEESSSH--HHHHHHHHHHTTCCSEE
T ss_pred ccccCCCEEEEE-ccccCcHH--HHHHHHHHHHhcCCCEE
Confidence 455799999887 66777888 67789999999998643
No 408
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=32.43 E-value=2.5e+02 Score=25.18 Aligned_cols=83 Identities=13% Similarity=0.156 Sum_probs=47.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchh---hhhhhHHHHHHcCCcee----ehhchh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE---VIYSLEHKMWDRGVQVI----SAKGQE 143 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~---v~~~L~~kll~rgI~v~----~~k~~~ 143 (282)
-++||.+|+.. -+| =+=.++|+.|.+.|++|+++...... ... -...+.+++...|.++. +-...+
T Consensus 42 ~l~gk~vlVTG----as~--GIG~aia~~La~~Ga~Vvl~~r~~~~-~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~ 114 (346)
T 3kvo_A 42 RLAGCTVFITG----ASR--GIGKAIALKAAKDGANIVIAAKTAQP-HPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQ 114 (346)
T ss_dssp TTTTCEEEEET----TTS--HHHHHHHHHHHTTTCEEEEEESCCSC-CSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHH
T ss_pred CCCCCEEEEeC----CCh--HHHHHHHHHHHHCCCEEEEEECChhh-hhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHH
Confidence 46788776643 122 24568899999999998887743221 111 12234555655554443 112222
Q ss_pred HHH--------HhhccCEEEEechh
Q 023401 144 TIN--------TALKADLIVLNTAV 160 (282)
Q Consensus 144 ~i~--------~a~~~DLVIaNT~v 160 (282)
+++ ....+|.+|.|..+
T Consensus 115 ~v~~~~~~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 115 QISAAVEKAIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 232 23479999999875
No 409
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=32.29 E-value=1.2e+02 Score=22.07 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=22.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
|++++||+|..| |...-.+...|.+.|....+....
T Consensus 3 ~~~~~ILivdd~------~~~~~~l~~~L~~~~~~~~v~~~~ 38 (144)
T 3kht_A 3 LRSKRVLVVEDN------PDDIALIRRVLDRKDIHCQLEFVD 38 (144)
T ss_dssp --CEEEEEECCC------HHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCCCEEEEEeCC------HHHHHHHHHHHHhcCCCeeEEEEC
Confidence 345678887654 445666777788888775444433
No 410
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=32.25 E-value=59 Score=22.73 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=26.3
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
+.+++.-+ .+.+ .+-+.+.+.+|+|++++.|.+
T Consensus 11 grs~eqK~----~L~~-~it~~l~~~lg~p~~~v~V~i 43 (72)
T 3mb2_A 11 GRSTEQKA----ELAR-ALSAAAAAAFDVPLAEVRLII 43 (72)
T ss_dssp CCCHHHHH----HHHH-HHHHHHHHHHTCCGGGEEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHhCCCcccEEEEE
Confidence 56777666 7777 678889999999999988765
No 411
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=32.16 E-value=1.8e+02 Score=26.71 Aligned_cols=80 Identities=8% Similarity=-0.001 Sum_probs=45.4
Q ss_pred cc-ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhc
Q 023401 72 MK-SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (282)
Q Consensus 72 ~~-~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~ 150 (282)
.+ |++|.+|++ .|+ +.-.++..+...|.+|.+.+-++=...+++..-..+...+.|..+......+ +...+
T Consensus 143 l~~gl~va~vGD-~~~-----va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~--eav~~ 214 (307)
T 3tpf_A 143 QNGIAKVAFIGD-SNN-----MCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKF--EALKD 214 (307)
T ss_dssp GGGCCEEEEESC-SSH-----HHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHH--HHHTT
T ss_pred CCCCCEEEEEcC-CCc-----cHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHH--HHhcC
Confidence 46 999999997 443 4455555566669999988833221223332222222224565543221111 24678
Q ss_pred cCEEEEech
Q 023401 151 ADLIVLNTA 159 (282)
Q Consensus 151 ~DLVIaNT~ 159 (282)
+|.|+.-+-
T Consensus 215 aDvvyt~~w 223 (307)
T 3tpf_A 215 KDVVITDTW 223 (307)
T ss_dssp CSEEEECCS
T ss_pred CCEEEecCc
Confidence 999998663
No 412
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=32.13 E-value=54 Score=22.55 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=25.7
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
+.+++.-+ .+.+ .+-+.+.+.+|+|++|+.|.+
T Consensus 13 grs~eqK~----~l~~-~lt~~l~~~lg~p~~~v~V~i 45 (67)
T 3m21_A 13 GPTNEQKQ----QLIE-GVSDLMVKVLNKNKASIVVII 45 (67)
T ss_dssp BSCHHHHH----HHHH-HHHHHHHHHHCCCGGGCEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHHCcCcccEEEEE
Confidence 45666666 6666 678889999999999987754
No 413
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=32.11 E-value=1.7e+02 Score=24.36 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=24.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
++||.+|+.. |+-=+=.++|+.|.+.|++|.++..+
T Consensus 5 l~~k~~lVTG------as~gIG~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 5 LKSRVFIVTG------ASSGLGAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp CTTCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCEEEEeC------CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4567655542 22235568899999999998877644
No 414
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=32.09 E-value=64 Score=21.38 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=24.8
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 276 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~~ 276 (282)
+.+++.-+ .+.+ .+-+.+.+.+|+|++++.|..-
T Consensus 11 g~s~eqk~----~l~~-~lt~~l~~~lg~~~~~v~V~i~ 44 (64)
T 3abf_A 11 GRPPEKKR----ELVR-RLTEMASRLLGEPYEEVRVILY 44 (64)
T ss_dssp TCCHHHHH----HHHH-HHHHHHHHHTTCCGGGEEEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHhCCCcccEEEEEE
Confidence 34555444 5666 5777888999999999988653
No 415
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=31.96 E-value=1.7e+02 Score=24.51 Aligned_cols=83 Identities=14% Similarity=0.228 Sum_probs=45.5
Q ss_pred EEEEEeccCCCCCchHHHHH-HHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhchhHHHHhhcc
Q 023401 76 LVLLVSHELSLSGGPLLLME-LAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKGQETINTALKA 151 (282)
Q Consensus 76 kILLISHELs~TGAPLlLle-LA~~Lkq~-G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k~~~~i~~a~~~ 151 (282)
+||+|.-.....|.--.|.+ ++..|++. |.+|.++-..+-+...-. +-.......|..... +...+..+...++
T Consensus 3 kIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~~~~~~~~--~~~~~c~~~~~~~~~~~~~~~~~~~~l~~A 80 (242)
T 1sqs_A 3 KIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISN--SDSEELFKKGIDRQSNADDGGVIKKELLES 80 (242)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTTTCCCCCCC--CCHHHHHHHCCCSSTTTSTHHHHHHHHHHC
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcccCCCCCCC--chHHhhccCCCCccchHHHHHHHHHHHHHC
Confidence 68888776654465555555 56788887 999988764432110000 000122222332222 2223334467889
Q ss_pred CEEEEechh
Q 023401 152 DLIVLNTAV 160 (282)
Q Consensus 152 DLVIaNT~v 160 (282)
|.||..|=+
T Consensus 81 D~iI~~sP~ 89 (242)
T 1sqs_A 81 DIIIISSPV 89 (242)
T ss_dssp SEEEEEEEE
T ss_pred CEEEEEccc
Confidence 999998743
No 416
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=31.91 E-value=2.5e+02 Score=25.46 Aligned_cols=80 Identities=11% Similarity=0.107 Sum_probs=41.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCC-eEEEEeccCCCCchhhhhhhHHHHHHc-CCc--eeehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGT-KVNWITIQKPSEEDEVIYSLEHKMWDR-GVQ--VISAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~-~V~vL~~~~G~~~~~v~~~L~~kll~r-gI~--v~~~k~~~~i~- 146 (282)
.+||++|++. + |+ .---.+..|.+.|. +|.+ .++.+.. .+-...|.+++.++ +.. +.+-.....+.
T Consensus 152 l~gk~~lVlG--a---GG--~g~aia~~L~~~Ga~~V~i-~nR~~~~-~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~ 222 (315)
T 3tnl_A 152 IIGKKMTICG--A---GG--AATAICIQAALDGVKEISI-FNRKDDF-YANAEKTVEKINSKTDCKAQLFDIEDHEQLRK 222 (315)
T ss_dssp CTTSEEEEEC--C---SH--HHHHHHHHHHHTTCSEEEE-EECSSTT-HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred ccCCEEEEEC--C---Ch--HHHHHHHHHHHCCCCEEEE-EECCCch-HHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence 4789999987 2 32 23345677778898 5555 4554321 11222334444443 322 22211122333
Q ss_pred HhhccCEEEEechh
Q 023401 147 TALKADLIVLNTAV 160 (282)
Q Consensus 147 ~a~~~DLVIaNT~v 160 (282)
...++|+||.-|-+
T Consensus 223 ~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 223 EIAESVIFTNATGV 236 (315)
T ss_dssp HHHTCSEEEECSST
T ss_pred hhcCCCEEEECccC
Confidence 35679988866654
No 417
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=31.90 E-value=57 Score=28.95 Aligned_cols=80 Identities=13% Similarity=0.147 Sum_probs=46.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------hhH
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------QET 144 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~--------~~~ 144 (282)
+.++|.+|. +|+ +=.-+|..|.+.|++|.++... . . .+.+.+.|+.+....+ ...
T Consensus 2 ~~mkI~IiG-----aG~--~G~~~a~~L~~~g~~V~~~~r~-~----~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~ 64 (335)
T 3ghy_A 2 SLTRICIVG-----AGA--VGGYLGARLALAGEAINVLARG-A----T-----LQALQTAGLRLTEDGATHTLPVRATHD 64 (335)
T ss_dssp CCCCEEEES-----CCH--HHHHHHHHHHHTTCCEEEECCH-H----H-----HHHHHHTCEEEEETTEEEEECCEEESC
T ss_pred CCCEEEEEC-----cCH--HHHHHHHHHHHCCCEEEEEECh-H----H-----HHHHHHCCCEEecCCCeEEEeeeEECC
Confidence 345677774 333 4445678888899999888732 1 1 3566677776542110 111
Q ss_pred HHHhhccCEEEEechhchHHHHHHhhc
Q 023401 145 INTALKADLIVLNTAVAGKWLDAVLKE 171 (282)
Q Consensus 145 i~~a~~~DLVIaNT~v~g~wl~~l~~~ 171 (282)
...+..+|+||+.+=. .-++++++.
T Consensus 65 ~~~~~~~D~Vilavk~--~~~~~~~~~ 89 (335)
T 3ghy_A 65 AAALGEQDVVIVAVKA--PALESVAAG 89 (335)
T ss_dssp HHHHCCCSEEEECCCH--HHHHHHHGG
T ss_pred HHHcCCCCEEEEeCCc--hhHHHHHHH
Confidence 2235679999998754 344555433
No 418
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=31.86 E-value=33 Score=27.45 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=30.5
Q ss_pred HHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 95 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 95 eLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.++..|++.|.++++..+-++ +-.++|.++||+++..
T Consensus 67 ~~a~~L~~~gv~vVI~g~IG~--------~a~~~L~~~GI~v~~~ 103 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRGIGR--------RAIAAFEAMGVKVIKG 103 (136)
T ss_dssp CHHHHHHHTTCSEEECSCCCH--------HHHHHHHHTTCEEECS
T ss_pred HHHHHHHHCCCCEEEECCCCH--------HHHHHHHHCCCEEEec
Confidence 678889999999998886644 4578899999999974
No 419
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=31.75 E-value=1.7e+02 Score=27.17 Aligned_cols=80 Identities=11% Similarity=0.063 Sum_probs=48.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHHhh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~~~k~~~~i~~a~ 149 (282)
.+|++|.+|..--|+ +.-.++..|...|.+|.+.+-++=...+++..-+++...+.|..+ ..+ . -+...
T Consensus 165 l~gl~va~vGD~~~r-----va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d--~--~eav~ 235 (325)
T 1vlv_A 165 LKGVKVVFMGDTRNN-----VATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSN--L--EEALA 235 (325)
T ss_dssp STTCEEEEESCTTSH-----HHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESC--H--HHHHT
T ss_pred cCCcEEEEECCCCcC-----cHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcC--H--HHHHc
Confidence 589999999872132 455666666677999999883221122334323333334667544 333 1 12467
Q ss_pred ccCEEEEechh
Q 023401 150 KADLIVLNTAV 160 (282)
Q Consensus 150 ~~DLVIaNT~v 160 (282)
++|.|+..+.+
T Consensus 236 ~aDvvyt~~w~ 246 (325)
T 1vlv_A 236 GADVVYTDVWA 246 (325)
T ss_dssp TCSEEEECCCC
T ss_pred cCCEEEecccc
Confidence 89999998876
No 420
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=31.74 E-value=2.4e+02 Score=24.01 Aligned_cols=38 Identities=11% Similarity=-0.081 Sum_probs=23.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
+++|-+|..+++..--.-++-.+...+++.|+++.+..
T Consensus 5 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~ 42 (332)
T 2rjo_A 5 QTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLT 42 (332)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 45677776665433223344555567777788877665
No 421
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=31.72 E-value=78 Score=27.29 Aligned_cols=80 Identities=15% Similarity=0.160 Sum_probs=44.0
Q ss_pred ccEEEEEeccCCC-C--Cch-HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-C----Cceeehhch--
Q 023401 74 SKLVLLVSHELSL-S--GGP-LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-G----VQVISAKGQ-- 142 (282)
Q Consensus 74 ~KkILLISHELs~-T--GAP-LlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-g----I~v~~~k~~-- 142 (282)
+++++.+..-.+. . -=| =-+.++++.|.+.|.+++++. ++.+.+ +.+++.+. + .+++.-.+.
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g---~~~e~~----~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFG---SAKDHE----AGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECC---CGGGHH----HHHHHHTTSCHHHHTTEEECTTTSC
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEe---ChhhHH----HHHHHHHhhhhccccceEeccCcCC
Confidence 4566766654311 1 222 267789999988898887653 332222 23444432 1 123322222
Q ss_pred --hHHHHhhccCEEEEe-chh
Q 023401 143 --ETINTALKADLIVLN-TAV 160 (282)
Q Consensus 143 --~~i~~a~~~DLVIaN-T~v 160 (282)
+.......+|++|.| |..
T Consensus 252 l~e~~ali~~a~l~I~~Dsg~ 272 (348)
T 1psw_A 252 LDQAVILIAACKAIVTNDSGL 272 (348)
T ss_dssp HHHHHHHHHTSSEEEEESSHH
T ss_pred HHHHHHHHHhCCEEEecCCHH
Confidence 223467889999999 654
No 422
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=31.69 E-value=43 Score=25.75 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=30.0
Q ss_pred HHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 95 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 95 eLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.++..|...|.++++..+-++ +-...|.+.||+++..
T Consensus 56 ~~~~~l~~~gv~~vi~~~iG~--------~a~~~L~~~GI~v~~~ 92 (124)
T 1eo1_A 56 RTAQIIANNGVKAVIASSPGP--------NAFEVLNELGIKIYRA 92 (124)
T ss_dssp THHHHHHHTTCCEEEECCSSH--------HHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHCCCCEEEECCcCH--------HHHHHHHHCCCEEEEc
Confidence 577888899999998886644 4568888999999974
No 423
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=31.67 E-value=1.7e+02 Score=27.51 Aligned_cols=43 Identities=19% Similarity=0.246 Sum_probs=29.9
Q ss_pred cEEEEEeccCCCCCchHHH--HHHHHHHHhCCCeEEEEeccCCCCchhh
Q 023401 75 KLVLLVSHELSLSGGPLLL--MELAFLLRGVGTKVNWITIQKPSEEDEV 121 (282)
Q Consensus 75 KkILLISHELs~TGAPLlL--leLA~~Lkq~G~~V~vL~~~~G~~~~~v 121 (282)
|+|++|.. .+|.=|++ +=|++.|++.|.+|++.+.. +|.-+++
T Consensus 213 k~Vl~v~D---NAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~-~P~vnDv 257 (367)
T 1xfi_A 213 KKAVIFVD---NSGADIILGILPFARELLRRGAQVVLAANE-LPSINDI 257 (367)
T ss_dssp CEEEEECC---BTTHHHHHTHHHHHHHHHHTTCEEEEEEBS-SCCTTBC
T ss_pred CEEEEEec---CCCchhhccHHHHHHHHHHcCCEEEEEECC-cCceeeC
Confidence 78999965 56754553 45899999999988877655 4443333
No 424
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=31.65 E-value=2.2e+02 Score=27.57 Aligned_cols=84 Identities=14% Similarity=0.072 Sum_probs=44.0
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT 147 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~~ 147 (282)
..+++|+||+.. -|| -+=-++++.|.+.|++|.++....... .+....+ +.+...++.++.. ....++..
T Consensus 7 ~~~~~~~ilVTG----atG--~IG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~l-~~~~~~~v~~v~~Dl~d~~~l~~ 78 (699)
T 1z45_A 7 SESTSKIVLVTG----GAG--YIGSHTVVELIENGYDCVVADNLSNST-YDSVARL-EVLTKHHIPFYEVDLCDRKGLEK 78 (699)
T ss_dssp ----CCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHH-HHHHTSCCCEEECCTTCHHHHHH
T ss_pred cccCCCEEEEEC----CCC--HHHHHHHHHHHHCcCEEEEEECCCcch-HHHHHHH-hhccCCceEEEEcCCCCHHHHHH
Confidence 446788887753 233 355688899999999999887443221 1111111 1122335554421 22334442
Q ss_pred -hh--ccCEEEEechhc
Q 023401 148 -AL--KADLIVLNTAVA 161 (282)
Q Consensus 148 -a~--~~DLVIaNT~v~ 161 (282)
+. .+|.||-|....
T Consensus 79 ~~~~~~~D~Vih~A~~~ 95 (699)
T 1z45_A 79 VFKEYKIDSVIHFAGLK 95 (699)
T ss_dssp HHHHSCCCEEEECCSCC
T ss_pred HHHhCCCCEEEECCccc
Confidence 23 699999887643
No 425
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=31.65 E-value=2.6e+02 Score=26.92 Aligned_cols=87 Identities=16% Similarity=0.089 Sum_probs=49.6
Q ss_pred ccccEEEEEe-ccCCCCCch-HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhh
Q 023401 72 MKSKLVLLVS-HELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (282)
Q Consensus 72 ~~~KkILLIS-HELs~TGAP-LlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~ 149 (282)
.+|++|.+|. |+++. |-+ =+.-.++..|...|.+|.+.+-++=...++++.-..+...+.|..+...... -....
T Consensus 186 l~Glkva~vgd~~~s~-Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~--~eav~ 262 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSY-GKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSM--AEAFK 262 (418)
T ss_dssp GTTCEEEEECCCCSSS-CCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCH--HHHHT
T ss_pred cCCCEEEEEecccccc-CccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCH--HHHhc
Confidence 6899999996 22222 222 3666777777778999999883321112333222233344567544322111 12467
Q ss_pred ccCEEEEechhc
Q 023401 150 KADLIVLNTAVA 161 (282)
Q Consensus 150 ~~DLVIaNT~v~ 161 (282)
++|.|+.-+=++
T Consensus 263 ~ADVVytd~W~s 274 (418)
T 2yfk_A 263 DADVVYPKSWAP 274 (418)
T ss_dssp TCSEEEECCCCC
T ss_pred CCCEEEEccccc
Confidence 899999987554
No 426
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=31.61 E-value=2.1e+02 Score=24.18 Aligned_cols=36 Identities=11% Similarity=0.192 Sum_probs=26.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
.++||+||+.. -+|+ +=.++|+.|.+.|++|.++..
T Consensus 15 ~l~~k~vlVTG----asgg--IG~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 15 LLQGQVAIVTG----GATG--IGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp TTTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEEC----CCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 47788777654 2332 556899999999999887763
No 427
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=31.61 E-value=37 Score=25.77 Aligned_cols=37 Identities=14% Similarity=0.019 Sum_probs=30.0
Q ss_pred HHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 95 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 95 eLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
.++..|...|.++++..+-++ +-.+.|.++||+++..
T Consensus 53 ~~~~~l~~~gv~~vi~~~iG~--------~a~~~L~~~GI~v~~~ 89 (116)
T 1rdu_A 53 KVVQSLVSKGVEYLIASNVGR--------NAFETLKAAGVKVYRF 89 (116)
T ss_dssp SHHHHHHTTTCCEEECSSCCS--------SCHHHHHTTTCEEECC
T ss_pred HHHHHHHHcCCCEEEECCCCH--------hHHHHHHHCCCEEEEC
Confidence 578888999999998886655 3468899999999974
No 428
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=31.56 E-value=33 Score=29.87 Aligned_cols=70 Identities=20% Similarity=0.246 Sum_probs=36.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeehhchhHHHHhhc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAKGQETINTALK 150 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-gI~v~~~k~~~~i~~a~~ 150 (282)
.+||+|++|+ ++..|. .++..|.+.|.+|.+ .++..+ . .+++.+. |+.+..+. . +.+.+
T Consensus 127 ~~~~~v~iiG--aG~~g~-----aia~~L~~~g~~V~v-~~r~~~-------~-~~~l~~~~g~~~~~~~-~---~~~~~ 186 (275)
T 2hk9_A 127 VKEKSILVLG--AGGASR-----AVIYALVKEGAKVFL-WNRTKE-------K-AIKLAQKFPLEVVNSP-E---EVIDK 186 (275)
T ss_dssp GGGSEEEEEC--CSHHHH-----HHHHHHHHHTCEEEE-ECSSHH-------H-HHHHTTTSCEEECSCG-G---GTGGG
T ss_pred cCCCEEEEEC--chHHHH-----HHHHHHHHcCCEEEE-EECCHH-------H-HHHHHHHcCCeeehhH-H---hhhcC
Confidence 4678888886 343343 345666667875443 333321 0 1233222 54433211 1 13568
Q ss_pred cCEEEEechhc
Q 023401 151 ADLIVLNTAVA 161 (282)
Q Consensus 151 ~DLVIaNT~v~ 161 (282)
+|+||..|-..
T Consensus 187 aDiVi~atp~~ 197 (275)
T 2hk9_A 187 VQVIVNTTSVG 197 (275)
T ss_dssp CSEEEECSSTT
T ss_pred CCEEEEeCCCC
Confidence 99999888753
No 429
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=31.52 E-value=2.2e+02 Score=26.64 Aligned_cols=78 Identities=12% Similarity=0.135 Sum_probs=45.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhcc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~ 151 (282)
.+|++|.+|++- |+ +.-.++..+...|.+|.+.+-++=...+++.....+...+.|..+......+ ...++
T Consensus 173 l~glkva~vGD~-~r-----va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~---av~~a 243 (339)
T 4a8t_A 173 LEDCKVVFVGDA-TQ-----VCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS---SVEGA 243 (339)
T ss_dssp GGGCEEEEESSC-CH-----HHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG---GGTTC
T ss_pred CCCCEEEEECCC-ch-----hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh---HHcCC
Confidence 689999999964 54 3445555566669999988833222233443333333344575443221122 46789
Q ss_pred CEEEEec
Q 023401 152 DLIVLNT 158 (282)
Q Consensus 152 DLVIaNT 158 (282)
|.|+.-+
T Consensus 244 Dvvytd~ 250 (339)
T 4a8t_A 244 DFLYTDV 250 (339)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9999743
No 430
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=31.51 E-value=52 Score=23.33 Aligned_cols=33 Identities=9% Similarity=0.214 Sum_probs=26.3
Q ss_pred cC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~-~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
|. +++.-+ .+.+ .+-+.+.+.+|+|++|+-|.+
T Consensus 10 Grls~eqk~----~L~~-~l~~~l~~~lgip~~~v~V~i 43 (76)
T 1gyx_A 10 RELDEQQKA----ALAA-DITDVIIRHLNSKDSSISIAL 43 (76)
T ss_dssp CCCCHHHHH----HHHH-HHHHHHHHHHTCCGGGCEEEE
T ss_pred CCCCHHHHH----HHHH-HHHHHHHHHhCcCCceEEEEE
Confidence 56 777777 7777 678889999999999987654
No 431
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=31.46 E-value=39 Score=33.43 Aligned_cols=46 Identities=13% Similarity=0.102 Sum_probs=33.2
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 023401 77 VLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 77 ILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
..||| ..+-+| +.++|+.|.+.|++..--. +..+.+.+.||+|.+-
T Consensus 15 ~aliS-V~DK~g----l~~~A~~L~~~G~eiisTg------------GTak~L~~~Gi~v~~V 60 (464)
T 1zcz_A 15 RILVS-LYEKEK----YLDILRELHEKGWEIWASS------------GTAKFLKSNGIEANDV 60 (464)
T ss_dssp EEEEE-CSSTGG----GHHHHHHHHHTTCEEEECH------------HHHHHHHHTTCCCEEG
T ss_pred EEEEE-ecCccC----HHHHHHHHHHCCCEEEECc------------hHHHHHHHCCCceEEH
Confidence 44555 345667 7899999999999865332 3467777889999865
No 432
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=31.42 E-value=82 Score=32.86 Aligned_cols=74 Identities=15% Similarity=0.171 Sum_probs=49.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhh
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~ 149 (282)
.=++||+|.++--|-. --+-+......|+..|++|.+++.++|+ +.. ..|+.+..+....... ..
T Consensus 596 ~ti~grKVaILlaDGf---Ee~El~~pvdaLr~AG~~V~vVS~~~g~----V~g-------s~G~~V~aD~t~~~v~-s~ 660 (753)
T 3ttv_A 596 GDVKGRVVAILLNDEV---RSADLLAILKALKAKGVHAKLLYSRMGE----VTA-------DDGTVLPIAATFAGAP-SL 660 (753)
T ss_dssp CCCTTCEEEEECCTTC---CHHHHHHHHHHHHHHTCEEEEEESSSSE----EEC-------TTSCEEECCEETTTSC-GG
T ss_pred CCCCCCEEEEEecCCC---CHHHHHHHHHHHHHCCCEEEEEEcCCCe----EEe-------CCCCEEecccchhhCC-Cc
Confidence 3467888877755421 2345788889999999999999966552 211 2588777664444333 45
Q ss_pred ccCEEEEec
Q 023401 150 KADLIVLNT 158 (282)
Q Consensus 150 ~~DLVIaNT 158 (282)
.||.||+=-
T Consensus 661 ~fDALVVPG 669 (753)
T 3ttv_A 661 TVDAVIVPC 669 (753)
T ss_dssp GCSEEEECC
T ss_pred CCCEEEECC
Confidence 699998843
No 433
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=31.39 E-value=1.7e+02 Score=24.27 Aligned_cols=38 Identities=11% Similarity=0.033 Sum_probs=26.3
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEE
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI 110 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL 110 (282)
++++|-+|..+.+..--.-++-.+...+++.|+++.+.
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~ 44 (290)
T 3clk_A 7 SSNVIAAVVSSVRTNFAQQILDGIQEEAHKNGYNLIIV 44 (290)
T ss_dssp -CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEE
Confidence 45678888877654433345566678888999998876
No 434
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=31.35 E-value=1.9e+02 Score=24.26 Aligned_cols=13 Identities=8% Similarity=0.110 Sum_probs=6.6
Q ss_pred HhCCCCCCEEEEEe
Q 023401 263 SLGVRNEDLLFAII 276 (282)
Q Consensus 263 ~lGl~~dd~lv~~~ 276 (282)
++|+|+ |+-|.++
T Consensus 203 ~~G~p~-dv~vvg~ 215 (313)
T 2h3h_A 203 NAGKVG-KVKIVCF 215 (313)
T ss_dssp HTTCTT-TSEEEEE
T ss_pred HcCCCC-CeEEEEe
Confidence 467664 4444443
No 435
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=31.22 E-value=1.5e+02 Score=24.67 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=24.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|+||++|+.. -+| =+=.++|+.|.+.|++|.++..
T Consensus 3 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r 37 (254)
T 1hdc_A 3 LSGKTVIITG----GAR--GLGAEAARQAVAAGARVVLADV 37 (254)
T ss_dssp CCCSEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 5788766643 222 2556889999999999887763
No 436
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=31.13 E-value=55 Score=26.34 Aligned_cols=38 Identities=11% Similarity=0.014 Sum_probs=29.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
+--+++||+ +|-.--+.++++..|+.|..++.+++..+
T Consensus 110 ~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI~IT~~~~ 147 (196)
T 2yva_A 110 GDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVALTGYDG 147 (196)
T ss_dssp TCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 344556654 57777888999999999999999997655
No 437
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=31.07 E-value=2.5e+02 Score=23.93 Aligned_cols=78 Identities=13% Similarity=0.199 Sum_probs=44.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHH--
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETI-- 145 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~---~-k~~~~i-- 145 (282)
++||++|+.. |+.=+=.++|+.|.+.|+.|.++..+.. ... .+.+++...|..+.. | .....+
T Consensus 31 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~r~~~-~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 99 (275)
T 4imr_A 31 LRGRTALVTG------SSRGIGAAIAEGLAGAGAHVILHGVKPG-STA----AVQQRIIASGGTAQELAGDLSEAGAGTD 99 (275)
T ss_dssp CTTCEEEETT------CSSHHHHHHHHHHHHTTCEEEEEESSTT-TTH----HHHHHHHHTTCCEEEEECCTTSTTHHHH
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEcCCHH-HHH----HHHHHHHhcCCeEEEEEecCCCHHHHHH
Confidence 5677666532 2233557899999999999887764332 122 234555554443321 1 111122
Q ss_pred --H---HhhccCEEEEechh
Q 023401 146 --N---TALKADLIVLNTAV 160 (282)
Q Consensus 146 --~---~a~~~DLVIaNT~v 160 (282)
+ .....|.+|.|..+
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 100 LIERAEAIAPVDILVINASA 119 (275)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhCCCCEEEECCCC
Confidence 2 12478999999775
No 438
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=31.06 E-value=1.4e+02 Score=24.23 Aligned_cols=89 Identities=13% Similarity=0.036 Sum_probs=46.1
Q ss_pred ccEEEEE-eccCCCCCchHHHHHHHHHHHhCCC--eEEEEe-ccCC-CCchhhhhhhHHHHHHcCCceeehhchhHH--H
Q 023401 74 SKLVLLV-SHELSLSGGPLLLMELAFLLRGVGT--KVNWIT-IQKP-SEEDEVIYSLEHKMWDRGVQVISAKGQETI--N 146 (282)
Q Consensus 74 ~KkILLI-SHELs~TGAPLlLleLA~~Lkq~G~--~V~vL~-~~~G-~~~~~v~~~L~~kll~rgI~v~~~k~~~~i--~ 146 (282)
.++|||| +++--|+ |+.=-=+-.++.+.|. .+.+-+ +-.+ ..++.+-+.-.+-+.++||..- .+ -+++ .
T Consensus 4 ~~~VLFVC~gN~cRS--pmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~-ar~l~~~ 79 (161)
T 2cwd_A 4 PVRVLFVCLGNICRS--PMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HV-ARRLTRE 79 (161)
T ss_dssp CEEEEEEESSSSSHH--HHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CC-CCBCCHH
T ss_pred CCEEEEECCCcHHHH--HHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-cc-ccCCCHh
Confidence 3589999 4454444 4332222344444453 455544 3322 1122333344566777899875 32 2222 2
Q ss_pred HhhccCEEEEechhchHHHH
Q 023401 147 TALKADLIVLNTAVAGKWLD 166 (282)
Q Consensus 147 ~a~~~DLVIaNT~v~g~wl~ 166 (282)
....||+||+=+--....+.
T Consensus 80 ~~~~~DlIi~M~~~~~~~l~ 99 (161)
T 2cwd_A 80 DVLAYDHILVMDRENLEEVL 99 (161)
T ss_dssp HHHHCSEEEESSHHHHHHHH
T ss_pred HhccCCEEEECChHHHHHHH
Confidence 36789999986654444443
No 439
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=31.02 E-value=72 Score=23.40 Aligned_cols=37 Identities=27% Similarity=0.288 Sum_probs=27.0
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEe
Q 023401 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWIT 111 (282)
Q Consensus 69 ~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G-~~V~vL~ 111 (282)
-..-.+++||+|..| |...-.+...|.+.| ++|....
T Consensus 15 ~~~~~~~~ilivdd~------~~~~~~l~~~L~~~g~~~v~~~~ 52 (146)
T 4dad_A 15 LYFQGMINILVASED------ASRLAHLARLVGDAGRYRVTRTV 52 (146)
T ss_dssp CCCGGGCEEEEECSC------HHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CCcCCCCeEEEEeCC------HHHHHHHHHHHhhCCCeEEEEeC
Confidence 334467889999765 566777888999988 8777633
No 440
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=30.86 E-value=47 Score=26.54 Aligned_cols=59 Identities=12% Similarity=-0.036 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHHhhccCEEEEechh
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINTALKADLIVLNTAV 160 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~~a~~~DLVIaNT~v 160 (282)
+=-++++.|.+.|++|.++..... . .+++...++.++.. ....+ .....+|.||.|...
T Consensus 12 iG~~l~~~L~~~g~~V~~~~R~~~--------~-~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 12 AGSAIVAEARRRGHEVLAVVRDPQ--------K-AADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSV 72 (224)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHH--------H-HHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCC
T ss_pred HHHHHHHHHHHCCCEEEEEEeccc--------c-cccccCCCceEEecccccccH-hhcccCCEEEECCcc
Confidence 556888999999999998874321 1 12333456666532 11222 556789999988766
No 441
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=30.85 E-value=1.3e+02 Score=24.61 Aligned_cols=59 Identities=19% Similarity=0.126 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh--hchhHHHH--hhccCEEEEech
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA--KGQETINT--ALKADLIVLNTA 159 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~--k~~~~i~~--a~~~DLVIaNT~ 159 (282)
+=..+|+.|.+.|++|.++-.. + +. .+++.+ .|+.++.. .....+.. ..++|.||+.|-
T Consensus 11 ~G~~la~~L~~~g~~v~vid~~-~----~~----~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 11 TAYYLARSMLSRKYGVVIINKD-R----EL----CEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp HHHHHHHHHHHTTCCEEEEESC-H----HH----HHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred HHHHHHHHHHhCCCeEEEEECC-H----HH----HHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 4457889999999999988732 2 11 234433 47777643 33334443 467999998764
No 442
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=30.84 E-value=1.3e+02 Score=23.61 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=25.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (282)
...+||+|..| |...-.+...|.+.|++|+..+
T Consensus 12 m~~~iLivdd~------~~~~~~l~~~L~~~g~~v~~~~ 44 (205)
T 1s8n_A 12 VPRRVLIAEDE------ALIRMDLAEMLREEGYEIVGEA 44 (205)
T ss_dssp CCCEEEEECSS------HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCccEEEEECC------HHHHHHHHHHHHHCCCEEEEEe
Confidence 34689999877 5677778888888899876444
No 443
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=30.83 E-value=1.4e+02 Score=25.76 Aligned_cols=78 Identities=15% Similarity=0.172 Sum_probs=43.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~--~~k~~~~i~- 146 (282)
++||++|+.. -+| =+=.++|+.|.+.|++|.++... .+ . ...+.+++...|..+ + +-...++++
T Consensus 32 l~~k~vlVTG----as~--gIG~aia~~L~~~G~~V~~~~r~-~~---~-~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 100 (291)
T 3cxt_A 32 LKGKIALVTG----ASY--GIGFAIASAYAKAGATIVFNDIN-QE---L-VDRGMAAYKAAGINAHGYVCDVTDEDGIQA 100 (291)
T ss_dssp CTTCEEEEET----CSS--HHHHHHHHHHHHTTCEEEEEESS-HH---H-HHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC----CCc--HHHHHHHHHHHHCCCEEEEEeCC-HH---H-HHHHHHHHHhcCCeEEEEEecCCCHHHHHH
Confidence 6788766542 222 25568899999999998877632 21 1 112234444444322 2 112222332
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
....+|.||.|..+
T Consensus 101 ~~~~~~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 101 MVAQIESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHHHHHHTCCCCEEEECCCC
T ss_pred HHHHHHHHcCCCcEEEECCCc
Confidence 12359999998765
No 444
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=30.64 E-value=2.1e+02 Score=23.68 Aligned_cols=82 Identities=15% Similarity=0.002 Sum_probs=42.8
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--HhhccC
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN--TALKAD 152 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~--~a~~~D 152 (282)
.+|-+|..+++..--.-++-.+-..+++.|+++.+... ++. +- + .+.++ ...++|
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~--~~~--~~------~-------------~~~i~~l~~~~vd 59 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV--PDG--EK------T-------------LNAIDSLAASGAK 59 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEEC--CSH--HH------H-------------HHHHHHHHHTTCC
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCC--CCH--HH------H-------------HHHHHHHHHcCCC
Confidence 45666666554332233444455666777877765543 110 10 0 11121 246689
Q ss_pred EEEEech---hchHHHHHHhhccCCCCCCceEEEe
Q 023401 153 LIVLNTA---VAGKWLDAVLKEDVPRVLPNVLWWI 184 (282)
Q Consensus 153 LVIaNT~---v~g~wl~~l~~~~~~~~~~pVIWWI 184 (282)
.||+... .....++.+.+.++ |||..=
T Consensus 60 giii~~~~~~~~~~~~~~~~~~~i-----PvV~~~ 89 (306)
T 8abp_A 60 GFVICTPDPKLGSAIVAKARGYDM-----KVIAVD 89 (306)
T ss_dssp EEEEECSCGGGHHHHHHHHHHTTC-----EEEEES
T ss_pred EEEEeCCCchhhHHHHHHHHHCCC-----cEEEeC
Confidence 8888765 22344666655555 776653
No 445
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=30.63 E-value=86 Score=26.28 Aligned_cols=67 Identities=16% Similarity=0.228 Sum_probs=45.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh-h----chhHH
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA-K----GQETI 145 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~-k----~~~~i 145 (282)
+++|+++-||-+-. -++++|+.+.+. |++.+.-. | ..+.+.+ .|+++-.- + |...|
T Consensus 11 ~g~V~lsv~D~dK~----~~v~~ak~~~~ll~Gf~l~AT~---g---------Ta~~L~e~~Gl~v~~v~k~~eGG~p~I 74 (152)
T 1b93_A 11 RKHIALVAHDHCKQ----MLMSWVERHQPLLEQHVLYATG---T---------TGNLISRATGMNVNAMLSGPMGGDQQV 74 (152)
T ss_dssp SCEEEEEECGGGHH----HHHHHHHHTHHHHTTSEEEEET---T---------HHHHHHHHHCCCCEEECCGGGTHHHHH
T ss_pred CCEEEEEEehhhHH----HHHHHHHHHHHHhCCCEEEEcc---H---------HHHHHHHHhCceeEEEEecCCCCCchH
Confidence 36799999998874 678999999999 99876544 3 1233444 58887533 2 33344
Q ss_pred H---HhhccCEEEE
Q 023401 146 N---TALKADLIVL 156 (282)
Q Consensus 146 ~---~a~~~DLVIa 156 (282)
- ...++|+||.
T Consensus 75 ~d~I~~geIdlVIn 88 (152)
T 1b93_A 75 GALISEGKIDVLIF 88 (152)
T ss_dssp HHHHHTTCCCEEEE
T ss_pred HHHHHCCCccEEEE
Confidence 3 3677999884
No 446
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.37 E-value=1.2e+02 Score=25.93 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=43.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (282)
|++|++|+.. |+.=+=.++|+.|.+.|+.|.++..+ .+ -...+.+++.+.|..+. +-....+++
T Consensus 2 l~~k~~lVTG------as~GIG~aia~~la~~G~~V~~~~r~-~~----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 70 (264)
T 3tfo_A 2 VMDKVILITG------ASGGIGEGIARELGVAGAKILLGARR-QA----RIEAIATEIRDAGGTALAQVLDVTDRHSVAA 70 (264)
T ss_dssp CTTCEEEESS------TTSHHHHHHHHHHHHTTCEEEEEESS-HH----HHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC------CccHHHHHHHHHHHHCCCEEEEEECC-HH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 4566555432 22225568899999999998777532 21 11233455555554433 112222232
Q ss_pred -------HhhccCEEEEechh
Q 023401 147 -------TALKADLIVLNTAV 160 (282)
Q Consensus 147 -------~a~~~DLVIaNT~v 160 (282)
.....|.+|.|..+
T Consensus 71 ~~~~~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 71 FAQAAVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 23479999998765
No 447
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=30.27 E-value=1.8e+02 Score=24.22 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=24.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
+++|++|+.. -+| -+=.++|+.|.+.|++|.++..
T Consensus 10 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 10 LSGRKAIVTG----GSK--GIGAAIARALDKAGATVAIADL 44 (263)
T ss_dssp CTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEeC----CCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 5788776653 222 2556889999999999887763
No 448
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=30.25 E-value=1.3e+02 Score=28.05 Aligned_cols=81 Identities=11% Similarity=0.049 Sum_probs=47.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHHhh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~~~k~~~~i~~a~ 149 (282)
.+|.+|.+|..--|++. -.++..+...|.+|.+.+-++=...+++..-+++...+.|..+ ..+ . -+...
T Consensus 153 l~gl~ia~vGD~~~~va-----~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d--~--~eav~ 223 (333)
T 1duv_G 153 FNEMTLVYAGDARNNMG-----NSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED--V--AKGVE 223 (333)
T ss_dssp GGGCEEEEESCTTSHHH-----HHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESC--H--HHHHT
T ss_pred CCCcEEEEECCCccchH-----HHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEEC--H--HHHhC
Confidence 57899999987324433 3444444455999999883221122334333333344667544 333 1 12467
Q ss_pred ccCEEEEechhc
Q 023401 150 KADLIVLNTAVA 161 (282)
Q Consensus 150 ~~DLVIaNT~v~ 161 (282)
++|.|+..+.++
T Consensus 224 ~aDvvytd~w~s 235 (333)
T 1duv_G 224 GADFIYTDVWVS 235 (333)
T ss_dssp TCSEEEECCSSC
T ss_pred CCCEEEeCCccc
Confidence 899999988853
No 449
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=30.24 E-value=71 Score=27.78 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=27.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
+.|+|++- .+.+-|-+-..+|++.|++.|++|+++..+.+
T Consensus 3 ~~k~Illg---vTGaiaa~k~~~ll~~L~~~g~eV~vv~T~~A 42 (209)
T 3zqu_A 3 GPERITLA---MTGASGAQYGLRLLDCLVQEEREVHFLISKAA 42 (209)
T ss_dssp SCSEEEEE---ECSSSCHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred CCCEEEEE---EECHHHHHHHHHHHHHHHHCCCEEEEEECccH
Confidence 34666654 23332334478999999999999999996654
No 450
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=30.21 E-value=1.6e+02 Score=24.13 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=25.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
|++|+||+.. -+|+ +=.++++.|.+.|++|.++...
T Consensus 12 ~~~k~vlITG----asgg--iG~~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 12 FVNKTIIVTG----GNRG--IGLAFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp CTTEEEEEET----TTSH--HHHHHHHHHHHTTEEEEEEESS
T ss_pred cCCCEEEEEC----CCch--HHHHHHHHHHHCCCeEEEEeCc
Confidence 6788776653 2332 5578999999999998887743
No 451
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=30.11 E-value=74 Score=30.15 Aligned_cols=58 Identities=26% Similarity=0.357 Sum_probs=40.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA 139 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~ 139 (282)
.++|+|++| |+-..-+|+|..|.+.|.+|.++........+. .+.+++.+ .||.+...
T Consensus 353 ~~~k~V~Vi-------GgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~~---~l~~~l~~~~gV~v~~~ 411 (521)
T 1hyu_A 353 FKGKRVAVI-------GGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQ---VLQDKVRSLKNVDIILN 411 (521)
T ss_dssp GBTSEEEEE-------CCSHHHHHHHHHHHHHBSEEEEECSSSSCCSCH---HHHHHHTTCTTEEEECS
T ss_pred cCCCeEEEE-------CCCHHHHHHHHHHHhhCCEEEEEEeCcccCcCH---HHHHHHhcCCCcEEEeC
Confidence 468899988 444567899999999999999987432221222 35666766 48877654
No 452
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.11 E-value=1.6e+02 Score=24.52 Aligned_cols=36 Identities=17% Similarity=0.082 Sum_probs=24.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
|+||++|+.. -+| =+=.++++.|.+.|++|.++..+
T Consensus 4 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 4 FAGKGVLVTG----GAR--GIGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp TTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEeC----CCC--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5677666542 222 25568899999999998877643
No 453
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=30.11 E-value=45 Score=33.45 Aligned_cols=102 Identities=16% Similarity=0.077 Sum_probs=57.5
Q ss_pred ccccccc-cEEEEEeccCCCCCchHHHHHHHHHHHhC------CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh
Q 023401 68 PLSFMKS-KLVLLVSHELSLSGGPLLLMELAFLLRGV------GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK 140 (282)
Q Consensus 68 ~~~f~~~-KkILLISHELs~TGAPLlLleLA~~Lkq~------G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k 140 (282)
+.+.++| |+|-+|. ++.-|.+ +|.-|++. |.+|.+-..+.+ ...++..+.|+.+....
T Consensus 47 ~~~~L~GiKkIgIIG--lGsMG~A-----mA~nLr~s~~~~g~G~~ViVg~r~~s--------ks~e~A~e~G~~v~d~t 111 (525)
T 3fr7_A 47 LPEAFKGIKQIGVIG--WGSQGPA-----QAQNLRDSLAEAKSDIVVKIGLRKGS--------KSFDEARAAGFTEESGT 111 (525)
T ss_dssp HHHHTTTCSEEEEEC--CTTHHHH-----HHHHHHHHHHHTTCCCEEEEEECTTC--------SCHHHHHHTTCCTTTTC
T ss_pred ChHHhcCCCEEEEEe--EhHHHHH-----HHHHHHhcccccCCCCEEEEEeCCch--------hhHHHHHHCCCEEecCC
Confidence 3478899 9999998 5554554 45566666 887765443322 12456667787652100
Q ss_pred chhHHHHhhccCEEEEechhch--HHHHHHhhccCCCCCCceEEEeeec
Q 023401 141 GQETINTALKADLIVLNTAVAG--KWLDAVLKEDVPRVLPNVLWWIHEM 187 (282)
Q Consensus 141 ~~~~i~~a~~~DLVIaNT~v~g--~wl~~l~~~~~~~~~~pVIWWIHE~ 187 (282)
....-+.+.++|+||+-+=... ..++++. ++++ ...+|...|=-
T Consensus 112 a~s~aEAa~~ADVVILaVP~~~~~eVl~eI~-p~LK--~GaILs~AaGf 157 (525)
T 3fr7_A 112 LGDIWETVSGSDLVLLLISDAAQADNYEKIF-SHMK--PNSILGLSHGF 157 (525)
T ss_dssp EEEHHHHHHHCSEEEECSCHHHHHHHHHHHH-HHSC--TTCEEEESSSH
T ss_pred CCCHHHHHhcCCEEEECCChHHHHHHHHHHH-HhcC--CCCeEEEeCCC
Confidence 0001225778999999876532 2444433 2221 12567776644
No 454
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=30.09 E-value=58 Score=26.33 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=30.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
++.-+++||+ +|-.--+.++++..|+.|..+..+++..+
T Consensus 113 ~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI~IT~~~~ 151 (199)
T 1x92_A 113 PGDVLLAIST----SGNSANVIQAIQAAHDREMLVVALTGRDG 151 (199)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3445666665 57777888999999999999999997655
No 455
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=30.07 E-value=85 Score=25.40 Aligned_cols=71 Identities=24% Similarity=0.257 Sum_probs=42.9
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccCE
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~DL 153 (282)
+|||+++-+|-- ..+-+......|+..|+++.++.-.++. .+. ...|+.+..+.....++ ..++|.
T Consensus 5 ~kkv~ill~~g~---~~~e~~~~~~~l~~ag~~v~~~s~~~~~---~v~-------~~~g~~i~~d~~l~~~~-~~~~D~ 70 (190)
T 4e08_A 5 SKSALVILAPGA---EEMEFIIAADVLRRAGIKVTVAGLNGGE---AVK-------CSRDVQILPDTSLAQVA-SDKFDV 70 (190)
T ss_dssp CCEEEEEECTTC---CHHHHHHHHHHHHHTTCEEEEEESSSSS---CEE-------CTTSCEEECSEETGGGT-TCCCSE
T ss_pred CcEEEEEECCCc---hHHHHHHHHHHHHHCCCEEEEEECCCCc---cee-------cCCCcEEECCCCHHHCC-cccCCE
Confidence 466766655411 2334445568899999999999966521 121 13577777664443332 346999
Q ss_pred EEEec
Q 023401 154 IVLNT 158 (282)
Q Consensus 154 VIaNT 158 (282)
||+=-
T Consensus 71 livpG 75 (190)
T 4e08_A 71 VVLPG 75 (190)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98743
No 456
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=29.92 E-value=2.7e+02 Score=23.93 Aligned_cols=85 Identities=14% Similarity=0.170 Sum_probs=46.6
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC-------chhhhhhhHHHHHHcCCcee----eh
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE-------EDEVIYSLEHKMWDRGVQVI----SA 139 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-------~~~v~~~L~~kll~rgI~v~----~~ 139 (282)
-++||.+|+.. -+ .=+=.++|+.|.+.|+.|+++....... ..+-...+.+++...|..+. +-
T Consensus 25 ~l~gk~~lVTG----as--~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 98 (299)
T 3t7c_A 25 KVEGKVAFITG----AA--RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV 98 (299)
T ss_dssp TTTTCEEEEES----TT--SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ccCCCEEEEEC----CC--CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC
Confidence 36788766643 22 2255688999999999998876432210 01111223344444454433 11
Q ss_pred hchhHHH--------HhhccCEEEEechhc
Q 023401 140 KGQETIN--------TALKADLIVLNTAVA 161 (282)
Q Consensus 140 k~~~~i~--------~a~~~DLVIaNT~v~ 161 (282)
....+++ .....|.+|.|..+.
T Consensus 99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 99 RDFDAMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 2222222 234799999998753
No 457
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=29.86 E-value=1.6e+02 Score=25.55 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=26.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHh--CCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRG--VGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq--~G~~V~vL~~~ 113 (282)
|++|+||+.+ -|| -+=-++++.|.+ .|++|.++...
T Consensus 8 ~~~~~vlVTG----atG--~IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITG----GAG--FVGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CTTCEEEEET----TTS--HHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred cCCCEEEEEC----CCC--HHHHHHHHHHHhhCCCCeEEEEECC
Confidence 5678877753 233 366688899988 89999998854
No 458
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=29.85 E-value=70 Score=27.34 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=28.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
.-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 130 ~~v~Gk~VllV-DDii~TG~--Tl~~a~~~L~~~ga~~V 165 (225)
T 2jbh_A 130 STLAGKNVLIV-EDVVGTGR--TMKALLSNIEKYKPNMI 165 (225)
T ss_dssp GGGTTSEEEEE-EEEESSSH--HHHHHHHHHHTTCCSEE
T ss_pred cccCCCEEEEE-ccccCcHH--HHHHHHHHHHhcCCCEE
Confidence 45799999888 67777888 67788999999998633
No 459
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=29.82 E-value=1.1e+02 Score=19.76 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=24.8
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Q 023401 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (282)
Q Consensus 238 ~~~~~l~~~a~~~v~~~~lre~vr~~lGl~~dd~lv~~ 275 (282)
+.+++.-+ .+.+ .+-+.+.+.+|+|++++-|..
T Consensus 13 g~s~e~k~----~l~~-~l~~~l~~~lg~p~~~v~v~i 45 (63)
T 2x4k_A 13 GRSDEQLK----NLVS-EVTDAVEKTTGANRQAIHVVI 45 (63)
T ss_dssp CCCHHHHH----HHHH-HHHHHHHHHHCCCGGGCEEEE
T ss_pred CCCHHHHH----HHHH-HHHHHHHHHhCcCcccEEEEE
Confidence 45666555 6666 677888999999999887754
No 460
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=29.77 E-value=47 Score=28.00 Aligned_cols=33 Identities=30% Similarity=0.383 Sum_probs=27.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCC-Ce
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TK 106 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G-~~ 106 (282)
..+||+||+| .|.=.||+ -|.+.++.|++.| ..
T Consensus 109 ~~~gk~VlLV-DDVitTG~--Tl~aa~~~L~~~G~a~ 142 (201)
T 1w30_A 109 GIDDALVILV-DDVLYSGR--SVRSALDALRDVGRPR 142 (201)
T ss_dssp CSTTCEEEEE-EEEESSSH--HHHHHHHHHHHHCCCS
T ss_pred cCCCCEEEEE-CCccchHH--HHHHHHHHHHhCCCCc
Confidence 3789998887 77778898 6678999999999 54
No 461
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=29.72 E-value=1.3e+02 Score=25.67 Aligned_cols=80 Identities=20% Similarity=0.144 Sum_probs=45.4
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeeh----hchhHH-HHh
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISA----KGQETI-NTA 148 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~~~v~~~L~~kll~rgI~v~~~----k~~~~i-~~a 148 (282)
|+++|.|+=.+ .-=.+-++...+ .|..+.++. ..++++.++.+....+-|.+.|+++..- ...+.+ +..
T Consensus 3 ~~l~l~s~~~~---~~~~~~~f~~~~--~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l 77 (206)
T 3l4e_A 3 KNLFLTSSFKD---VVPLFTEFESNL--QGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKL 77 (206)
T ss_dssp CEEEEESCGGG---CHHHHHHHSCCC--TTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHH
T ss_pred hheEEeecccc---hHHHHHHHHHHc--CCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHH
Confidence 46777775443 322333333222 267787777 3332334556667777787888776533 122222 356
Q ss_pred hccCEEEEech
Q 023401 149 LKADLIVLNTA 159 (282)
Q Consensus 149 ~~~DLVIaNT~ 159 (282)
.++|.||+.-.
T Consensus 78 ~~ad~I~l~GG 88 (206)
T 3l4e_A 78 RKNDFIYVTGG 88 (206)
T ss_dssp HHSSEEEECCS
T ss_pred HhCCEEEECCC
Confidence 78999998653
No 462
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=29.68 E-value=1.9e+02 Score=24.67 Aligned_cols=31 Identities=19% Similarity=0.353 Sum_probs=18.8
Q ss_pred hhccCEEEEechhc---hHHHHHHhhccCCCCCCceEEE
Q 023401 148 ALKADLIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWW 183 (282)
Q Consensus 148 a~~~DLVIaNT~v~---g~wl~~l~~~~~~~~~~pVIWW 183 (282)
..++|.||++..-. ...++.+.+..+ |||.+
T Consensus 58 ~~~vdgiii~~~~~~~~~~~~~~a~~~gi-----pvV~~ 91 (316)
T 1tjy_A 58 NQGYDAIIVSAVSPDGLCPALKRAMQRGV-----KILTW 91 (316)
T ss_dssp HTTCSEEEECCSSSSTTHHHHHHHHHTTC-----EEEEE
T ss_pred HcCCCEEEEeCCCHHHHHHHHHHHHHCcC-----EEEEe
Confidence 46788888766432 345666654455 66665
No 463
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=29.67 E-value=66 Score=26.10 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=29.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
+.-+++||+ +|-.--+.++++.+|+.|..++.+++..+
T Consensus 93 ~dvvI~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 130 (201)
T 3fxa_A 93 EDILILISK----GGNTGELLNLIPACKTKGSTLIGVTENPD 130 (201)
T ss_dssp TCEEEEECS----SSCCHHHHTTHHHHHHHTCEEEEEESCTT
T ss_pred CCEEEEEeC----CCCCHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 445566654 56667788999999999999999997655
No 464
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=29.50 E-value=2.5e+02 Score=25.17 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=47.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-C-CceeehhchhHHHHhh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-G-VQVISAKGQETINTAL 149 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~r-g-I~v~~~k~~~~i~~a~ 149 (282)
|+.-+|-+|+ ++.-| ...++..|+..|.+++.++....+ -.+++.++ | .+++.+ .++.+. ..
T Consensus 24 m~~irvgiiG--~G~~~----~~~~~~~~~~~~~~lvav~d~~~~--------~a~~~a~~~~~~~~~~~-~~~ll~-~~ 87 (361)
T 3u3x_A 24 MDELRFAAVG--LNHNH----IYGQVNCLLRAGARLAGFHEKDDA--------LAAEFSAVYADARRIAT-AEEILE-DE 87 (361)
T ss_dssp --CCEEEEEC--CCSTT----HHHHHHHHHHTTCEEEEEECSCHH--------HHHHHHHHSSSCCEESC-HHHHHT-CT
T ss_pred ccCcEEEEEC--cCHHH----HHHHHHHhhcCCcEEEEEEcCCHH--------HHHHHHHHcCCCcccCC-HHHHhc-CC
Confidence 5666899999 33222 233455566689999999865441 12344443 5 344443 333332 35
Q ss_pred ccCEEEEechhc--hHHHHHHhhcc
Q 023401 150 KADLIVLNTAVA--GKWLDAVLKED 172 (282)
Q Consensus 150 ~~DLVIaNT~v~--g~wl~~l~~~~ 172 (282)
++|+|++.|-.. ..++.+.++..
T Consensus 88 ~vD~V~I~tp~~~H~~~~~~al~aG 112 (361)
T 3u3x_A 88 NIGLIVSAAVSSERAELAIRAMQHG 112 (361)
T ss_dssp TCCEEEECCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCC
Confidence 699999988754 34455555443
No 465
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=29.47 E-value=1.7e+02 Score=23.72 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHHH--------hhccCEEEEech
Q 023401 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETINT--------ALKADLIVLNTA 159 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~~--------a~~~DLVIaNT~ 159 (282)
+=.++++.|.+.|++|.++..+..+ -...+.+++...+..+. +-...++++. ...+|.||.|..
T Consensus 13 iG~~la~~l~~~G~~v~~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag 88 (244)
T 1edo_A 13 IGKAIALSLGKAGCKVLVNYARSAK----AAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAG 88 (244)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5578999999999999887644332 11123344444343322 1122333331 236899999976
Q ss_pred hc
Q 023401 160 VA 161 (282)
Q Consensus 160 v~ 161 (282)
+.
T Consensus 89 ~~ 90 (244)
T 1edo_A 89 IT 90 (244)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 466
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=29.26 E-value=2.3e+02 Score=23.87 Aligned_cols=68 Identities=13% Similarity=0.043 Sum_probs=40.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-Hhhc
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TALK 150 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a~~ 150 (282)
+|+||+++ -|| .+=-++++.|.+.|++|..+....+. .+ ++ ++.++.. . ..++. ...+
T Consensus 2 ~~~vlVtG----atG--~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~-~~-~~~~~~~Dl~-~~~~~~~~~~ 62 (311)
T 3m2p_A 2 SLKIAVTG----GTG--FLGQYVVESIKNDGNTPIILTRSIGN----------KA-IN-DYEYRVSDYT-LEDLINQLND 62 (311)
T ss_dssp CCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTTT
T ss_pred CCEEEEEC----CCc--HHHHHHHHHHHhCCCEEEEEeCCCCc----------cc-CC-ceEEEEcccc-HHHHHHhhcC
Confidence 35666542 233 25567889999999999999866221 11 11 5555422 3 44443 4567
Q ss_pred cCEEEEechh
Q 023401 151 ADLIVLNTAV 160 (282)
Q Consensus 151 ~DLVIaNT~v 160 (282)
+|.||-+...
T Consensus 63 ~d~Vih~a~~ 72 (311)
T 3m2p_A 63 VDAVVHLAAT 72 (311)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEcccc
Confidence 9988877654
No 467
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=29.24 E-value=95 Score=28.27 Aligned_cols=66 Identities=15% Similarity=0.138 Sum_probs=40.5
Q ss_pred ccEEEEEeccC--CCCCchH-HHHHHHHHHHhCCCe-----EEEEeccCC------CCchhhhhhhHHHHHHcCCceeeh
Q 023401 74 SKLVLLVSHEL--SLSGGPL-LLMELAFLLRGVGTK-----VNWITIQKP------SEEDEVIYSLEHKMWDRGVQVISA 139 (282)
Q Consensus 74 ~KkILLISHEL--s~TGAPL-lLleLA~~Lkq~G~~-----V~vL~~~~G------~~~~~v~~~L~~kll~rgI~v~~~ 139 (282)
++++++|.=-. +..|+|+ +.++++..|++.|.. |.++....- +..++....+++.+.++||++...
T Consensus 149 ~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~ 228 (437)
T 3sx6_A 149 EPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTN 228 (437)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECS
T ss_pred CCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcC
Confidence 56667775321 2334444 234566999999975 888874321 111245556778888889998764
No 468
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=29.23 E-value=2e+02 Score=23.86 Aligned_cols=80 Identities=19% Similarity=0.156 Sum_probs=44.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN 146 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~----~~k~~~~i~ 146 (282)
.|+||++|+.. -+| =+=.++|+.|.+.|++|.++... .+ .. ..+.+++.+.|..+. +-.....++
T Consensus 11 ~l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r~-~~---~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 79 (260)
T 2zat_A 11 PLENKVALVTA----STD--GIGLAIARRLAQDGAHVVVSSRK-QE---NV-DRTVATLQGEGLSVTGTVCHVGKAEDRE 79 (260)
T ss_dssp TTTTCEEEESS----CSS--HHHHHHHHHHHHTTCEEEEEESC-HH---HH-HHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCCCEEEEEC----CCc--HHHHHHHHHHHHCCCEEEEEeCC-HH---HH-HHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 36788766532 223 35568899999999998887633 21 11 122344444443322 112222222
Q ss_pred --------HhhccCEEEEechhc
Q 023401 147 --------TALKADLIVLNTAVA 161 (282)
Q Consensus 147 --------~a~~~DLVIaNT~v~ 161 (282)
....+|.+|.|..+.
T Consensus 80 ~~~~~~~~~~g~iD~lv~~Ag~~ 102 (260)
T 2zat_A 80 RLVAMAVNLHGGVDILVSNAAVN 102 (260)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 223799999998753
No 469
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=29.23 E-value=2.2e+02 Score=27.01 Aligned_cols=85 Identities=13% Similarity=0.131 Sum_probs=48.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hhchhHH
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AKGQETI 145 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~----~k~~~~i 145 (282)
.|-.+|+||+.. -+|+ +=.++++.|.+.|+..++++++.++.. +-...+.+++...|..+.. -....++
T Consensus 222 ~~~~~~~vLITG----gtGg--IG~~la~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v 294 (486)
T 2fr1_A 222 EWKPTGTVLVTG----GTGG--VGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESV 294 (486)
T ss_dssp CCCCCSEEEEET----TTSH--HHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred CcCCCCEEEEEC----CCCH--HHHHHHHHHHHcCCCEEEEEcCCCCCc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHH
Confidence 566777776542 3444 667889999999998555555544311 1112345566666655431 1223333
Q ss_pred H-Hh------hccCEEEEechhc
Q 023401 146 N-TA------LKADLIVLNTAVA 161 (282)
Q Consensus 146 ~-~a------~~~DLVIaNT~v~ 161 (282)
. .. ...|.||-|..+.
T Consensus 295 ~~~~~~i~~~g~ld~VIh~AG~~ 317 (486)
T 2fr1_A 295 RELLGGIGDDVPLSAVFHAAATL 317 (486)
T ss_dssp HHHHHTSCTTSCEEEEEECCCCC
T ss_pred HHHHHHHHhcCCCcEEEECCccC
Confidence 3 11 2359999887653
No 470
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=29.23 E-value=62 Score=25.65 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=31.1
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (282)
++--+++||+ +|-.--+.++++.+|+.|..+..+++..+
T Consensus 96 ~~d~vI~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 134 (183)
T 2xhz_A 96 PQDVVIAISN----SGESSEITALIPVLKRLHVPLICITGRPE 134 (183)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHTTTCCEEEEESCTT
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4455677765 57777889999999999999999997655
No 471
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=29.19 E-value=2.5e+02 Score=23.46 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=26.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 70 ~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
.-++||++|+.. |+-=+=.++|+.|.+.|++|.++...
T Consensus 9 ~~l~gk~vlVTG------as~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 9 GPLTGKVAFITG------AARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp CTTTTCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCEEEEEC------CCChHHHHHHHHHHHCCCeEEEEecc
Confidence 346788776642 22225568899999999998887643
No 472
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=29.16 E-value=57 Score=29.20 Aligned_cols=66 Identities=27% Similarity=0.384 Sum_probs=38.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCC--eEEEEeccCCCCchhhhhhhHHHHHHcCCc--eeehhchhHHH-Hhh
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGT--KVNWITIQKPSEEDEVIYSLEHKMWDRGVQ--VISAKGQETIN-TAL 149 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~--~V~vL~~~~G~~~~~v~~~L~~kll~rgI~--v~~~k~~~~i~-~a~ 149 (282)
++|.+|+ ++.-|. .+|..|++.|+ +|.+.- +.. + -.+++.+.|+. ...+.. + .+.
T Consensus 34 ~kI~IIG--~G~mG~-----slA~~l~~~G~~~~V~~~d-r~~----~----~~~~a~~~G~~~~~~~~~~----~~~~~ 93 (314)
T 3ggo_A 34 QNVLIVG--VGFMGG-----SFAKSLRRSGFKGKIYGYD-INP----E----SISKAVDLGIIDEGTTSIA----KVEDF 93 (314)
T ss_dssp SEEEEES--CSHHHH-----HHHHHHHHTTCCSEEEEEC-SCH----H----HHHHHHHTTSCSEEESCTT----GGGGG
T ss_pred CEEEEEe--eCHHHH-----HHHHHHHhCCCCCEEEEEE-CCH----H----HHHHHHHCCCcchhcCCHH----HHhhc
Confidence 7899998 555565 46778889999 655432 222 1 13455666662 222211 1 256
Q ss_pred ccCEEEEechh
Q 023401 150 KADLIVLNTAV 160 (282)
Q Consensus 150 ~~DLVIaNT~v 160 (282)
++|+||..+-.
T Consensus 94 ~aDvVilavp~ 104 (314)
T 3ggo_A 94 SPDFVMLSSPV 104 (314)
T ss_dssp CCSEEEECSCG
T ss_pred cCCEEEEeCCH
Confidence 78888877654
No 473
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=29.15 E-value=77 Score=22.81 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=24.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEE
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI 110 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL 110 (282)
|+..+||+|..| |...-.+...|.+.|++|...
T Consensus 1 m~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~ 33 (140)
T 2qr3_A 1 MSLGTIIIVDDN------KGVLTAVQLLLKNHFSKVITL 33 (140)
T ss_dssp -CCCEEEEECSC------HHHHHHHHHHHTTTSSEEEEE
T ss_pred CCCceEEEEeCC------HHHHHHHHHHHHhCCcEEEEe
Confidence 456788988876 667777888888888887643
No 474
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=29.03 E-value=2.3e+02 Score=26.07 Aligned_cols=79 Identities=18% Similarity=0.167 Sum_probs=49.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHHhh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~~~k~~~~i~~a~ 149 (282)
.+|++|.+|..- |+ +.-.++..+...|.+|.+.+-++=...+++..-+++...+.|..+ .++ . -+...
T Consensus 153 l~gl~va~vGD~-~r-----va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d--~--~eav~ 222 (315)
T 1pvv_A 153 IKGVKVVYVGDG-NN-----VAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHD--P--VKAVK 222 (315)
T ss_dssp CTTCEEEEESCC-CH-----HHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC--H--HHHTT
T ss_pred cCCcEEEEECCC-cc-----hHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeC--H--HHHhC
Confidence 589999999873 44 445666666677999999883322223334333333334667544 333 1 12567
Q ss_pred ccCEEEEechh
Q 023401 150 KADLIVLNTAV 160 (282)
Q Consensus 150 ~~DLVIaNT~v 160 (282)
++|.|+.-+.+
T Consensus 223 ~aDvvy~~~w~ 233 (315)
T 1pvv_A 223 DADVIYTDVWA 233 (315)
T ss_dssp TCSEEEECCCC
T ss_pred CCCEEEEccee
Confidence 89999998875
No 475
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=28.98 E-value=1.1e+02 Score=28.77 Aligned_cols=81 Identities=23% Similarity=0.275 Sum_probs=52.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHh----CCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHH
Q 023401 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG----VGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETI 145 (282)
Q Consensus 74 ~KkILLISHELs~TGAPLlLleLA~~Lkq----~G~~V~vL~~~~G~----~~~~v~~~L~~kll~rgI~v~~~k~~~~i 145 (282)
+|+|++| |+-..-+|+|..|.+ .|.+|.++...... ...++...+.+.+.++||.+.......++
T Consensus 180 ~~~vvVi-------GgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i 252 (493)
T 1m6i_A 180 VKSITII-------GGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSV 252 (493)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEE
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEE
Confidence 7888888 555567899988876 58889888643221 12345556677788889988755221111
Q ss_pred ---------H----HhhccCEEEEechhc
Q 023401 146 ---------N----TALKADLIVLNTAVA 161 (282)
Q Consensus 146 ---------~----~a~~~DLVIaNT~v~ 161 (282)
. ....+|+||..+-+.
T Consensus 253 ~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 253 GVSSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp EEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred EecCCeEEEEECCCCEEECCEEEECCCCC
Confidence 1 123589999866543
No 476
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=28.96 E-value=56 Score=28.10 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=28.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 71 f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
-++||+||+| .|.=.||+ -|..+++.|++.|...+
T Consensus 113 ~~~gk~VliV-DDii~TG~--Tl~~~~~~l~~~g~~~v 147 (204)
T 3hvu_A 113 SVEGRDILIV-EDIIDSGL--TLSYLVDLFKYRKAKSV 147 (204)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCSEE
T ss_pred cCCCCEEEEE-eceeCchH--HHHHHHHHHHHcCCCEE
Confidence 3689999888 67778888 56688999999998743
No 477
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=28.95 E-value=1.2e+02 Score=27.29 Aligned_cols=76 Identities=12% Similarity=0.085 Sum_probs=41.9
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh-hchhHHHHhhccCE
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA-KGQETINTALKADL 153 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~-k~~~~i~~a~~~DL 153 (282)
++|+++-=--|..|-= +-+|+.|.+.|++|.++.... + ..+...-..+.+.+.|+++..+ .....+ ....+|+
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-l~~~~dl 153 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYPKR-P-NKPLFTGLVTQCQKMDIPFLGEMPPEPMM-VDELYEL 153 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCSC-C-SSHHHHHHHHHHHHTTCCBCSSCCSSHHH-HHHHCSE
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEeCC-C-CCHHHHHHHHHHHHcCCcEEecccchhhh-ccCCCcE
Confidence 3565554444444442 567999999999999876432 2 1222233445566668876521 111111 1136788
Q ss_pred EEE
Q 023401 154 IVL 156 (282)
Q Consensus 154 VIa 156 (282)
||=
T Consensus 154 IID 156 (265)
T 2o8n_A 154 VVD 156 (265)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 478
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=28.93 E-value=1.3e+02 Score=25.32 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=33.8
Q ss_pred ccccccEEEEEeccCCCC-CchH----HHHHHHHHHHhCCC-eEEEEecc
Q 023401 70 SFMKSKLVLLVSHELSLS-GGPL----LLMELAFLLRGVGT-KVNWITIQ 113 (282)
Q Consensus 70 ~f~~~KkILLISHELs~T-GAPL----lLleLA~~Lkq~G~-~V~vL~~~ 113 (282)
+|.+||+++|+++=.+-| |-+. -+-+++..+++.|. +|..++.+
T Consensus 43 d~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D 92 (176)
T 4f82_A 43 DQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVN 92 (176)
T ss_dssp HHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred HHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 466999999999998888 4444 24566678899999 78888754
No 479
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=28.79 E-value=2.4e+02 Score=23.11 Aligned_cols=38 Identities=11% Similarity=-0.062 Sum_probs=22.4
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++|-+|..+.+..--.-++-.+...+++.|+++.+...
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 40 (290)
T 2fn9_A 3 GKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDS 40 (290)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 45666665544332223445556778888998876653
No 480
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=28.71 E-value=48 Score=28.39 Aligned_cols=42 Identities=19% Similarity=0.123 Sum_probs=27.1
Q ss_pred cEEEEEec----cCCC----CCch-HHHHHHHHHHHhCCCeEEEEeccCCC
Q 023401 75 KLVLLVSH----ELSL----SGGP-LLLMELAFLLRGVGTKVNWITIQKPS 116 (282)
Q Consensus 75 KkILLISH----ELs~----TGAP-LlLleLA~~Lkq~G~~V~vL~~~~G~ 116 (282)
||||+|-= ++.. +|.- +=+......|++.|++|.+.+..+++
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~~ 54 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKF 54 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCCC
Confidence 56776653 3332 5653 33444457899999999999966553
No 481
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=28.71 E-value=2.2e+02 Score=26.54 Aligned_cols=81 Identities=10% Similarity=0.066 Sum_probs=48.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHHhh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v--~~~k~~~~i~~a~ 149 (282)
.+|++|.+|..--|+ +.-.++..+...|.+|.+.+-++=...++++.-+++...+.|..+ ..+ . -....
T Consensus 153 l~gl~va~vGD~~~~-----va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d--~--~eav~ 223 (335)
T 1dxh_A 153 LHDISYAYLGDARNN-----MGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTED--P--KEAVK 223 (335)
T ss_dssp GGGCEEEEESCCSSH-----HHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESC--H--HHHTT
T ss_pred cCCeEEEEecCCccc-----hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeC--H--HHHhC
Confidence 579999999873243 444555556667999999883222123334333333344667544 333 1 12567
Q ss_pred ccCEEEEechhc
Q 023401 150 KADLIVLNTAVA 161 (282)
Q Consensus 150 ~~DLVIaNT~v~ 161 (282)
++|.|+..+.++
T Consensus 224 ~aDvvytd~w~s 235 (335)
T 1dxh_A 224 GVDFVHTDVWVS 235 (335)
T ss_dssp TCSEEEECCCSC
T ss_pred CCCEEEeCCccc
Confidence 899999988853
No 482
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=28.71 E-value=70 Score=28.44 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=28.3
Q ss_pred CCCeEEEEe---ccCCCCchhhhhhhHHHHHHcCCceeehh
Q 023401 103 VGTKVNWIT---IQKPSEEDEVIYSLEHKMWDRGVQVISAK 140 (282)
Q Consensus 103 ~G~~V~vL~---~~~G~~~~~v~~~L~~kll~rgI~v~~~k 140 (282)
.|.++++++ +-++|+..++-.-..++|.++|++|+..+
T Consensus 65 ~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~t 105 (201)
T 1vp8_A 65 EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQS 105 (201)
T ss_dssp TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECC
T ss_pred cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEe
Confidence 577888887 44555667777777888888899888764
No 483
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=28.61 E-value=49 Score=27.47 Aligned_cols=55 Identities=13% Similarity=-0.003 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccCEEEEe
Q 023401 91 LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLN 157 (282)
Q Consensus 91 LlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~DLVIaN 157 (282)
+=+..-...|++.|++|.++..++|+ +. -..|+++..+.....++ ..+||.||+=
T Consensus 22 ~E~~~p~~~l~~ag~~V~~~s~~~~~----v~-------~~~G~~v~~d~~l~~v~-~~~yD~liiP 76 (177)
T 4hcj_A 22 EEYFESKKIFESAGYKTKVSSTFIGT----AQ-------GKLGGMTNIDLLFSEVD-AVEFDAVVFV 76 (177)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSEE----EE-------ETTSCEEEECEEGGGCC-GGGCSEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCe----Ee-------eCCCCEEecCccHHHCC-HhHCCEEEEC
Confidence 44555668899999999999966553 21 13588888776555554 5789998873
No 484
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=28.59 E-value=1.4e+02 Score=26.02 Aligned_cols=81 Identities=17% Similarity=0.174 Sum_probs=46.4
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCC--CeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hh-c-hhHH-H-
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AK-G-QETI-N- 146 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G--~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~--~k-~-~~~i-~- 146 (282)
|-.+|+| |.+--|..+...+++.+ ++|+.+.+++++.. + .+...+.|||++. .+ . .+++ +
T Consensus 10 ri~vl~S------G~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~-----~-l~~A~~~gIp~~~~~~~~~~~~~~~~~ 77 (215)
T 3kcq_A 10 RVGVLIS------GRGSNLEALAKAFSTEESSVVISCVISNNAEAR-----G-LLIAQSYGIPTFVVKRKPLDIEHISTV 77 (215)
T ss_dssp EEEEEES------SCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCT-----H-HHHHHHTTCCEEECCBTTBCHHHHHHH
T ss_pred EEEEEEE------CCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchH-----H-HHHHHHcCCCEEEeCcccCChHHHHHH
Confidence 3446665 34446777777776643 67777776554321 2 3567778999984 21 1 1222 2
Q ss_pred -HhhccCEEEEec---hhchHHHHH
Q 023401 147 -TALKADLIVLNT---AVAGKWLDA 167 (282)
Q Consensus 147 -~a~~~DLVIaNT---~v~g~wl~~ 167 (282)
...++|+|++-. ++....++.
T Consensus 78 L~~~~~Dlivlagy~~IL~~~~l~~ 102 (215)
T 3kcq_A 78 LREHDVDLVCLAGFMSILPEKFVTD 102 (215)
T ss_dssp HHHTTCSEEEESSCCSCCCHHHHHH
T ss_pred HHHhCCCEEEEeCCceEeCHHHHhh
Confidence 356799999742 333444443
No 485
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=28.52 E-value=1.1e+02 Score=23.77 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=24.3
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 75 KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
|.|+++|.=.+..+.|-.+.+.+..+++.|+.++.+.-
T Consensus 105 ~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igv 142 (182)
T 1shu_X 105 SIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGV 142 (182)
T ss_dssp EEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeC
Confidence 55666666555445455556677777777777777663
No 486
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=28.47 E-value=2.2e+02 Score=23.98 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=25.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
|+||++|+..=-. +| =+=.++|+.|.+.|++|.++...
T Consensus 4 l~~k~vlVTGas~--~~--gIG~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIVGVAN--NK--SIAYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp TTTCEEEEECCCS--TT--SHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEECCCC--CC--cHHHHHHHHHHHCCCEEEEEeCC
Confidence 5778766643110 02 24568899999999998877643
No 487
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=28.38 E-value=2.6e+02 Score=23.29 Aligned_cols=21 Identities=14% Similarity=0.090 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhCCCeEEEEec
Q 023401 92 LLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~ 112 (282)
++-.+...+++.|+++.+...
T Consensus 28 ~~~gi~~~a~~~g~~~~~~~~ 48 (294)
T 3qk7_A 28 MISWIGIELGKRGLDLLLIPD 48 (294)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 344455666667777666654
No 488
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=28.33 E-value=2.3e+02 Score=25.25 Aligned_cols=85 Identities=12% Similarity=0.129 Sum_probs=48.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeehhchhHHHHhh
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISAKGQETINTAL 149 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G~~~~~v~~~L~~kll~-rgI~v~~~k~~~~i~~a~ 149 (282)
|+..+|.+|+= |. +---.+++.|++. |.+++.+.....+ -.+++.+ .|++...+ ..+.+. ..
T Consensus 25 m~~~rigiIG~-----G~-~g~~~~~~~l~~~~~~~l~av~d~~~~--------~~~~~a~~~g~~~~~~-~~~ll~-~~ 88 (350)
T 3rc1_A 25 ANPIRVGVIGC-----AD-IAWRRALPALEAEPLTEVTAIASRRWD--------RAKRFTERFGGEPVEG-YPALLE-RD 88 (350)
T ss_dssp -CCEEEEEESC-----CH-HHHHTHHHHHHHCTTEEEEEEEESSHH--------HHHHHHHHHCSEEEES-HHHHHT-CT
T ss_pred CCceEEEEEcC-----cH-HHHHHHHHHHHhCCCeEEEEEEcCCHH--------HHHHHHHHcCCCCcCC-HHHHhc-CC
Confidence 66678999963 32 1212355666666 8888878755431 1234444 48888733 333222 34
Q ss_pred ccCEEEEechhc--hHHHHHHhhcc
Q 023401 150 KADLIVLNTAVA--GKWLDAVLKED 172 (282)
Q Consensus 150 ~~DLVIaNT~v~--g~wl~~l~~~~ 172 (282)
++|+|++.|--. ..++.+.++..
T Consensus 89 ~~D~V~i~tp~~~h~~~~~~al~aG 113 (350)
T 3rc1_A 89 DVDAVYVPLPAVLHAEWIDRALRAG 113 (350)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHHTT
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCC
Confidence 799999988654 44555555443
No 489
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=28.19 E-value=2e+02 Score=23.91 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=24.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++||++|+.. -+| =+=.++|+.|.+.|++|.++..
T Consensus 5 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 5 ISGKVAVITG----SSS--GIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CTTCEEEEES----CSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEcC
Confidence 5677666542 222 2556889999999999887763
No 490
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=28.13 E-value=1.8e+02 Score=23.11 Aligned_cols=70 Identities=19% Similarity=0.084 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhccCEEEEechhchHHHHHHh
Q 023401 91 LLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVL 169 (282)
Q Consensus 91 LlLleLA~~Lkq~G~~V~vL~-~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~DLVIaNT~v~g~wl~~l~ 169 (282)
|-.=++..+|. .+.++.++. ++.+.. .+-..+.+.|.++||.+-.+ +|-.|.+-+.-|.
T Consensus 49 l~~~~l~~ll~-~~~evliiGtG~~~~~--~~~~~~~~~l~~~gI~ve~m-----------------~T~~A~rtyN~L~ 108 (122)
T 2ab1_A 49 VQPADVKEVVE-KGVQTLVIGRGMSEAL--KVPSSTVEYLKKHGIDVRVL-----------------QTEQAVKEYNALV 108 (122)
T ss_dssp CCHHHHHHHHT-TCCSEEEEEECSSCCS--CCCHHHHHHHHHTTCEEEEE-----------------CHHHHHHHHHHHH
T ss_pred CCHHHHHHHhh-CCCCEEEECCCCCCcc--CCCHHHHHHHHHcCCEEEEe-----------------CHHHHHHHHHHHH
Confidence 44556666655 478988888 444421 12234566666666665543 4555555556666
Q ss_pred hccCCCCCCceEEEee
Q 023401 170 KEDVPRVLPNVLWWIH 185 (282)
Q Consensus 170 ~~~~~~~~~pVIWWIH 185 (282)
.|.. +|..++|
T Consensus 109 ~EgR-----~VaAal~ 119 (122)
T 2ab1_A 109 AQGV-----RVGGVFH 119 (122)
T ss_dssp HTTC-----CEEEEEE
T ss_pred hCCC-----cEEEEEe
Confidence 5655 7777777
No 491
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=28.13 E-value=69 Score=22.38 Aligned_cols=31 Identities=32% Similarity=0.379 Sum_probs=21.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~ 108 (282)
|.+++||+|..| |...-.+...|.+.|++|.
T Consensus 3 mm~~~ilivdd~------~~~~~~l~~~L~~~g~~v~ 33 (127)
T 2gkg_A 3 HMSKKILIVESD------TALSATLRSALEGRGFTVD 33 (127)
T ss_dssp ---CEEEEECSC------HHHHHHHHHHHHHHTCEEE
T ss_pred CCCCeEEEEeCC------HHHHHHHHHHHHhcCceEE
Confidence 344678888766 6667777788888888775
No 492
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=27.84 E-value=87 Score=27.39 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=0.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHHhhcc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll~rgI~v~~~k~~~~i~~a~~~ 151 (282)
+.||+|++|. ++..|. .+|+.|+..|.+|.+.-..... .+++.+.|+.........+.- .++
T Consensus 153 l~g~~v~IiG--~G~iG~-----~~a~~l~~~G~~V~~~dr~~~~---------~~~~~~~g~~~~~~~~l~~~l--~~a 214 (293)
T 3d4o_A 153 IHGANVAVLG--LGRVGM-----SVARKFAALGAKVKVGARESDL---------LARIAEMGMEPFHISKAAQEL--RDV 214 (293)
T ss_dssp STTCEEEEEC--CSHHHH-----HHHHHHHHTTCEEEEEESSHHH---------HHHHHHTTSEEEEGGGHHHHT--TTC
T ss_pred CCCCEEEEEe--eCHHHH-----HHHHHHHhCCCEEEEEECCHHH---------HHHHHHCCCeecChhhHHHHh--cCC
Q ss_pred CEEEEec
Q 023401 152 DLIVLNT 158 (282)
Q Consensus 152 DLVIaNT 158 (282)
|+|+..+
T Consensus 215 DvVi~~~ 221 (293)
T 3d4o_A 215 DVCINTI 221 (293)
T ss_dssp SEEEECC
T ss_pred CEEEECC
No 493
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=27.78 E-value=2.1e+02 Score=22.10 Aligned_cols=93 Identities=15% Similarity=0.091 Sum_probs=46.9
Q ss_pred CccccccccE-EEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH--Hc----CCceeeh
Q 023401 67 SPLSFMKSKL-VLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW--DR----GVQVISA 139 (282)
Q Consensus 67 ~~~~f~~~Kk-ILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~~~v~~~L~~kll--~r----gI~v~~~ 139 (282)
...+|-..+. |++++. ++..-++-.+++.+..|. +..+.++. . |+...++ ++.+. +. .+.....
T Consensus 15 ~~~~~~~~~~~i~~~G~-~~~~Kg~~~li~a~~~l~--~~~l~i~G-~-~~~~~~l----~~~~~~~~~~l~~~v~~~g~ 85 (177)
T 2f9f_A 15 SKFKFKCYGDFWLSVNR-IYPEKRIELQLEVFKKLQ--DEKLYIVG-W-FSKGDHA----ERYARKIMKIAPDNVKFLGS 85 (177)
T ss_dssp TTCCCCCCCSCEEEECC-SSGGGTHHHHHHHHHHCT--TSCEEEEB-C-CCTTSTH----HHHHHHHHHHSCTTEEEEES
T ss_pred cccccCCCCCEEEEEec-cccccCHHHHHHHHHhCC--CcEEEEEe-c-CccHHHH----HHHHHhhhcccCCcEEEeCC
Confidence 3444544444 555554 444555667788887773 45555544 3 3322333 44444 22 3333333
Q ss_pred hchhHH-HHhhccCEEEEech---hchHHHHHH
Q 023401 140 KGQETI-NTALKADLIVLNTA---VAGKWLDAV 168 (282)
Q Consensus 140 k~~~~i-~~a~~~DLVIaNT~---v~g~wl~~l 168 (282)
...+.+ .....+|+++.-+. .....++++
T Consensus 86 ~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eam 118 (177)
T 2f9f_A 86 VSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAM 118 (177)
T ss_dssp CCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHH
Confidence 223333 46778999987442 223445544
No 494
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=27.67 E-value=64 Score=26.31 Aligned_cols=91 Identities=11% Similarity=0.080 Sum_probs=46.9
Q ss_pred cEEEEEe-ccCCCCCchHHHHHHHHHHHhCCC--eEEEEe-ccCCC-CchhhhhhhHHHHHHcCCceeeh--hchhHHHH
Q 023401 75 KLVLLVS-HELSLSGGPLLLMELAFLLRGVGT--KVNWIT-IQKPS-EEDEVIYSLEHKMWDRGVQVISA--KGQETINT 147 (282)
Q Consensus 75 KkILLIS-HELs~TGAPLlLleLA~~Lkq~G~--~V~vL~-~~~G~-~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~~ 147 (282)
++||||. ++.-|+ |+.=-=+-.++.+.|. .+.+-+ +-.+. .++.+-+.-.+-+.++||..-.. +..... .
T Consensus 2 ~~VLFVC~gNicRS--pmAEai~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~~~a~~~l~~~Gid~s~~~ar~l~~~-d 78 (156)
T 2gi4_A 2 KKILFICLGNICRS--PMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLNIEHKNFTSKKLTQK-L 78 (156)
T ss_dssp CEEEEECSSCSSHH--HHHHHHHHHHHHHHTTTTTCEEEEEBSSCSSTTCCCCHHHHHHHHHTSCSCCCCCCCBCCHH-H
T ss_pred CEEEEEeCCCHHHH--HHHHHHHHHHHHhCCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCCCccCCccccCCHH-H
Confidence 4789984 444443 4433323344445454 244444 33221 12233344566777789987543 222222 3
Q ss_pred hhccCEEEEechhchHHHHHH
Q 023401 148 ALKADLIVLNTAVAGKWLDAV 168 (282)
Q Consensus 148 a~~~DLVIaNT~v~g~wl~~l 168 (282)
..+||+||+=+--....+.+.
T Consensus 79 ~~~~DlIi~Md~~~~~~l~~~ 99 (156)
T 2gi4_A 79 CDESDFLITMDNSNFKNVLKN 99 (156)
T ss_dssp HTTCSEEECCCHHHHHHHHHH
T ss_pred hccCCEEEEECChHHHHHHHH
Confidence 578999997665444444433
No 495
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=27.65 E-value=1.5e+02 Score=28.55 Aligned_cols=88 Identities=16% Similarity=0.060 Sum_probs=50.8
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCc---------hhhhhhhHHHHHHcCCcee
Q 023401 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEE---------DEVIYSLEHKMWDRGVQVI 137 (282)
Q Consensus 68 ~~~f~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~---------~~v~~~L~~kll~rgI~v~ 137 (282)
+..|-.+|.+|+.. .+|+ +=.++|+.|-+.|..+++++ ++.+... .+-...+.+++...|..+.
T Consensus 245 ~~~~~~~~~vLITG----gsgG--IG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~ 318 (525)
T 3qp9_A 245 SPWWQADGTVLVTG----AEEP--AAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATAT 318 (525)
T ss_dssp CCSSCTTSEEEESS----TTSH--HHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEE
T ss_pred cceecCCCEEEEEC----CCCc--HHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEE
Confidence 34567777666532 2333 56789999999999988887 7765320 1111234566666676554
Q ss_pred eh----hchhHHH----H---hhccCEEEEechhc
Q 023401 138 SA----KGQETIN----T---ALKADLIVLNTAVA 161 (282)
Q Consensus 138 ~~----k~~~~i~----~---a~~~DLVIaNT~v~ 161 (282)
.. ....++. . ....|.||-|..+.
T Consensus 319 ~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~ 353 (525)
T 3qp9_A 319 VVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTV 353 (525)
T ss_dssp EEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCC
T ss_pred EEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCC
Confidence 22 2233333 1 13579999887654
No 496
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=27.62 E-value=2.8e+02 Score=23.42 Aligned_cols=68 Identities=10% Similarity=0.122 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCCeEEEEeccC-CCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-HhhccCEEEEechh
Q 023401 92 LLMELAFLLRGVGTKVNWITIQK-PSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TALKADLIVLNTAV 160 (282)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~-G~~~~~v~~~L~~kll~rgI~v~~~--k~~~~i~-~a~~~DLVIaNT~v 160 (282)
+=-++++.|.+.|++|.++.... .....+-. ...+.+...|+.++.. ....++. ....+|.||.|+..
T Consensus 16 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~a~~ 87 (321)
T 3c1o_A 16 IGKFMVRASLSFSHPTFIYARPLTPDSTPSSV-QLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPF 87 (321)
T ss_dssp THHHHHHHHHHTTCCEEEEECCCCTTCCHHHH-HHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred hHHHHHHHHHhCCCcEEEEECCcccccChHHH-HHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 33467788888899999888543 11001110 1112344567777632 2334554 45679999988753
No 497
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=27.60 E-value=1.5e+02 Score=24.83 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=24.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++||++|+.. |+.=+=.++|+.|.+.|++|.++..
T Consensus 6 l~gk~~lVTG------as~gIG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 6 YQGKKAIVIG------GTHGMGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TTTCEEEEET------CSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4678766653 2223556899999999999887763
No 498
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=27.55 E-value=2e+02 Score=24.55 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=24.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (282)
++||.+|+.. |+.=+=.++|+.|.+.|+.|+++..
T Consensus 25 l~~k~vlVTG------as~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 25 LNQRVCIVTG------GGSGIGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC------CCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 5677666543 2222556889999999999887763
No 499
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=27.53 E-value=1e+02 Score=25.92 Aligned_cols=39 Identities=33% Similarity=0.363 Sum_probs=30.7
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHh--CCCeEEEEeccCC
Q 023401 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRG--VGTKVNWITIQKP 115 (282)
Q Consensus 73 ~~KkILLISHELs~TGAPLlLleLA~~Lkq--~G~~V~vL~~~~G 115 (282)
++--+++||+ +|-.--++++++.+|+ .|..++.+++..+
T Consensus 106 ~~DlvI~iS~----SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~ 146 (220)
T 3etn_A 106 ENDLLLLISN----SGKTREIVELTQLAHNLNPGLKFIVITGNPD 146 (220)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHHCTTCEEEEEESCTT
T ss_pred CCCEEEEEcC----CCCCHHHHHHHHHHHhcCCCCeEEEEECCCC
Confidence 3445666655 6777788999999999 9999999997655
No 500
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=27.49 E-value=2.6e+02 Score=23.47 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=25.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 023401 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (282)
Q Consensus 72 ~~~KkILLISHELs~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (282)
|++|+||+.. -+| =+=.++|+.|.+.|++|.++..+
T Consensus 6 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 6 LRDKVVIVTG----ASM--GIGRAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp GTTCEEEEES----CSS--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCEEEEeC----CCC--HHHHHHHHHHHHCCCEEEEEecC
Confidence 5788766543 223 25568899999999998887644
Done!