Citrus Sinensis ID: 023404
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 282 | ||||||
| 224072162 | 462 | predicted protein [Populus trichocarpa] | 0.957 | 0.584 | 0.744 | 1e-121 | |
| 224058361 | 429 | predicted protein [Populus trichocarpa] | 0.957 | 0.629 | 0.740 | 1e-118 | |
| 255537733 | 462 | conserved hypothetical protein [Ricinus | 0.957 | 0.584 | 0.718 | 1e-116 | |
| 388503372 | 422 | unknown [Medicago truncatula] | 0.957 | 0.639 | 0.704 | 1e-114 | |
| 356513299 | 454 | PREDICTED: uncharacterized protein LOC10 | 0.957 | 0.594 | 0.696 | 1e-114 | |
| 356527674 | 452 | PREDICTED: uncharacterized protein LOC10 | 0.921 | 0.575 | 0.719 | 1e-114 | |
| 359489711 | 450 | PREDICTED: uncharacterized protein LOC10 | 0.957 | 0.6 | 0.682 | 1e-114 | |
| 297745405 | 420 | unnamed protein product [Vitis vinifera] | 0.957 | 0.642 | 0.682 | 1e-114 | |
| 224127878 | 442 | predicted protein [Populus trichocarpa] | 0.957 | 0.610 | 0.674 | 1e-112 | |
| 225426012 | 427 | PREDICTED: uncharacterized protein LOC10 | 0.957 | 0.632 | 0.692 | 1e-110 |
| >gi|224072162|ref|XP_002303634.1| predicted protein [Populus trichocarpa] gi|222841066|gb|EEE78613.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/270 (74%), Positives = 226/270 (83%)
Query: 13 RKKLKIRMRCLKKVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGV 72
R ++ + L VEQAVEVYHDEEY+SKRWHFPSYNF++S IWSPFL KAAIFED +GV
Sbjct: 193 RNHVQSLLCILSTVEQAVEVYHDEEYKSKRWHFPSYNFTISNIWSPFLVKAAIFEDNDGV 252
Query: 73 STSEVQLHLDKLDKKWTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTEL 132
STSEVQL LDKLD WT Y LDYMIISTGKWFLK++IY+ENDTVVGCH CP +N TE
Sbjct: 253 STSEVQLQLDKLDTNWTNLYQGLDYMIISTGKWFLKAAIYHENDTVVGCHICPGKNFTEK 312
Query: 133 GFDFAYRKTLSSVMDFIAASKHKGLVFFRTSTPDHFENGEWHNGGSCQKMMPVKEGDIEL 192
GF FAY K L M+FIA SKHKGL+FFRTSTPDHFENGEWHNGG+C K P KEG+IEL
Sbjct: 313 GFVFAYEKALRYAMNFIATSKHKGLIFFRTSTPDHFENGEWHNGGNCTKTTPAKEGEIEL 372
Query: 193 KDLNRILRNIELEEFEKAVPRASQNGVKLKLLDFTNLLLLRPDGHPGAYREFQPFAKDKD 252
KDLN+ILR +EL EFEKA +A++NGV LKLLDFTNLLL RPDGHPG YR+F PFA+DK+
Sbjct: 373 KDLNKILRTVELAEFEKASAKAAENGVNLKLLDFTNLLLSRPDGHPGPYRQFHPFAQDKN 432
Query: 253 AKVQNDCLHWCLPGPIDTWNDLIMETVVNG 282
AKVQNDCLHWCLPGPID WND+IME +NG
Sbjct: 433 AKVQNDCLHWCLPGPIDYWNDVIMEMAING 462
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224058361|ref|XP_002299487.1| predicted protein [Populus trichocarpa] gi|222846745|gb|EEE84292.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255537733|ref|XP_002509933.1| conserved hypothetical protein [Ricinus communis] gi|223549832|gb|EEF51320.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|388503372|gb|AFK39752.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356513299|ref|XP_003525351.1| PREDICTED: uncharacterized protein LOC100816814 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356527674|ref|XP_003532433.1| PREDICTED: uncharacterized protein LOC100778581 [Glycine max] | Back alignment and taxonomy information |
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| >gi|359489711|ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297745405|emb|CBI40485.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224127878|ref|XP_002320186.1| predicted protein [Populus trichocarpa] gi|222860959|gb|EEE98501.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225426012|ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265666 [Vitis vinifera] gi|297742310|emb|CBI34459.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 282 | ||||||
| TAIR|locus:2136113 | 432 | TBL23 "AT4G11090" [Arabidopsis | 0.921 | 0.601 | 0.624 | 5e-92 | |
| TAIR|locus:2128489 | 430 | TBL24 "AT4G23790" [Arabidopsis | 0.921 | 0.604 | 0.600 | 1.7e-89 | |
| TAIR|locus:2035342 | 456 | TBL25 "AT1G01430" [Arabidopsis | 0.911 | 0.563 | 0.547 | 3.7e-80 | |
| TAIR|locus:2125048 | 442 | TBL26 "AT4G01080" [Arabidopsis | 0.893 | 0.570 | 0.536 | 3.4e-77 | |
| TAIR|locus:2146062 | 526 | TBL21 "AT5G15890" [Arabidopsis | 0.900 | 0.482 | 0.370 | 5.4e-47 | |
| TAIR|locus:2020628 | 416 | TBL27 "TRICHOME BIREFRINGENCE- | 0.893 | 0.605 | 0.372 | 6.2e-46 | |
| TAIR|locus:2146077 | 426 | TBL19 "AT5G15900" [Arabidopsis | 0.879 | 0.582 | 0.351 | 1.5e-44 | |
| TAIR|locus:2091388 | 414 | TBL22 "AT3G28150" [Arabidopsis | 0.890 | 0.606 | 0.332 | 1.1e-39 | |
| TAIR|locus:2153077 | 501 | YLS7 "AT5G51640" [Arabidopsis | 0.929 | 0.522 | 0.309 | 3.2e-33 | |
| TAIR|locus:2138043 | 533 | TBL18 "AT4G25360" [Arabidopsis | 0.851 | 0.450 | 0.292 | 5.5e-30 |
| TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 163/261 (62%), Positives = 200/261 (76%)
Query: 23 LKKVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLD 82
L VE+ VEVYHDE YRSKRWHFPSYNF+VS IWSPFL +A IFED NGVS++ VQLHLD
Sbjct: 168 LSTVEKPVEVYHDENYRSKRWHFPSYNFTVSNIWSPFLVQADIFEDSNGVSSAAVQLHLD 227
Query: 83 KLDKKWTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKR-NLTELGFDFAYRKT 141
KLD WT+ + +LDY IIS+G+WFLK+++Y+EN VGCH CP+ N+T+LGFD+AY +
Sbjct: 228 KLDNTWTDLFPSLDYAIISSGEWFLKTAVYHENANPVGCHGCPESSNMTDLGFDYAYNTS 287
Query: 142 LSSVMDFIAASKHKGLVFFRTSTPDHFENGEWHNGGSCQKMMPVKEGDIELKDLNRILRN 201
L VMDFIA SK KG++FFRTS PDHFE+GEWHNGG+C+K PV E +E+K LN+ILR+
Sbjct: 288 LRHVMDFIAKSKTKGMIFFRTSIPDHFEDGEWHNGGTCKKTEPVGEEAVEMKVLNKILRD 347
Query: 202 IELEEFEKAVPRASQNGVKXXXXXXXXXXXXRPDGHPGAYREFQPFAKDKDAKVQNDCLH 261
+E+ +FE+ V Q RPDGHPG YREF+PF KDK+A VQNDCLH
Sbjct: 348 VEINQFERVVTEMGQESENLKLLDFAGMLLTRPDGHPGPYREFRPFDKDKNATVQNDCLH 407
Query: 262 WCLPGPIDTWNDLIMETVVNG 282
WCLPGPID ND+I+E +VNG
Sbjct: 408 WCLPGPIDHLNDVILEIIVNG 428
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| TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2138043 TBL18 "AT4G25360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 282 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 3e-74 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 5e-10 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
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Score = 227 bits (581), Expect = 3e-74
Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 27/261 (10%)
Query: 20 MRCLKKVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQL 79
+ L +VE + + R R+ F YN ++ WSPFL ++ + + L
Sbjct: 34 VCLLSQVEPPKGKTLERDGRLFRFRFKDYNVTIEFYWSPFLVES------DNAEEGKRVL 87
Query: 80 HLDKLDKKWTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTELGFDFAYR 139
LD +D+KW++ + D ++ ++G W+L +Y G YC K N E+GF AYR
Sbjct: 88 KLDSIDEKWSKLWPGADVLVFNSGHWWLHRKVYI------GWDYCQKSNYKEMGFLDAYR 141
Query: 140 KTLSSVMDFIAA--SKHKGLVFFRTSTPDHFENGEWHNGGSCQKMMPVKEGDIELKDLNR 197
K L + ++ K VFFRT +P HFE GEW+ GGSC + P+ E K L
Sbjct: 142 KALETWAKWVDVNLPPSKTRVFFRTFSPVHFEGGEWNTGGSCYETEPLLG--SEYKGLTP 199
Query: 198 ILRNIELEEFEKAVPRASQNGVKLKLLDFTNLLLLRPDGHPGAYREFQPFAKDKDAKVQN 257
+ +I E +A +KLLD T L R DGHP YR+ P K+
Sbjct: 200 EMIDIVNEVLSRA-----AMKTPVKLLDITLLSQYRKDGHPSVYRKPGPPKKE------Q 248
Query: 258 DCLHWCLPGPIDTWNDLIMET 278
DCLHWCLPG DTWN+L++
Sbjct: 249 DCLHWCLPGVPDTWNELLLAL 269
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The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 282 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 97.61 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 90.14 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
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Probab=100.00 E-value=2.3e-90 Score=657.59 Aligned_cols=255 Identities=22% Similarity=0.399 Sum_probs=215.9
Q ss_pred ccceeeccCCcccHHHHhhhhcceecCceeEeecccceeEEEEcccCeeEEEEeeceeeeccccccCCCCccceeEEEec
Q 023404 3 RNMKIRTRCLRKKLKIRMRCLKKVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLD 82 (282)
Q Consensus 3 r~mfVGDSl~RNq~eSL~ClL~~v~~~~~~~~~~~~~~~~~~f~~yn~Tv~~~wspfLV~~~~~~~~~~~~~~~~~l~lD 82 (282)
|||||||||+|||||||+|||++++++..+....+++.++|+|++|||||+||||||||+.+.. . +...|+||
T Consensus 122 rl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~---~----~~~~l~LD 194 (387)
T PLN02629 122 TVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAV---Q----GKRVLKLE 194 (387)
T ss_pred eEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecC---C----CceeEEec
Confidence 7999999999999999999999988765555556667889999999999999999999998642 1 23579999
Q ss_pred ccchHHHhhcCCccEEEEecceeeeeeeeeecCCeEeccccCCC--CcccccchHHHHHHHHHHHHHHHH--hcCCCcEE
Q 023404 83 KLDKKWTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPK--RNLTELGFDFAYRKTLSSVMDFIA--ASKHKGLV 158 (282)
Q Consensus 83 ~~~~~~~~~~~~~DvlV~ntGhWw~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~ay~~al~t~~~~v~--~~~~~~~v 158 (282)
++++ ++++|+++|||||||||||.+++ .++||+++.. .++++|++.+||++||+||++||+ +++.+++|
T Consensus 195 ~id~-~a~~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~v 267 (387)
T PLN02629 195 EISG-NANAWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRV 267 (387)
T ss_pred Ccch-hhhhhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 9886 69999999999999999999864 3577777743 367999999999999999999997 77889999
Q ss_pred EEeecCCCCCCCCCCCCCC-----CC-CcccccCCCccccchhhHHHhhhhHHHHHhhhhccccCCceeEEeeccccccC
Q 023404 159 FFRTSTPDHFENGEWHNGG-----SC-QKMMPVKEGDIELKDLNRILRNIELEEFEKAVPRASQNGVKLKLLDFTNLLLL 232 (282)
Q Consensus 159 f~Rt~SP~Hf~~g~W~~Gg-----~C-~~T~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIT~ls~~ 232 (282)
||||+||+||+||+||+|| +| ++|+|+.++++ .++...+++ +++++.+.++.+|+|||||+||++
T Consensus 268 ffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~~~~~~~~~--------~ve~v~~~~~~~v~lLDIT~ls~l 338 (387)
T PLN02629 268 FFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTY-PGAYPDQMR--------VVDEVIRGMHNPAYLLDITLLSEL 338 (387)
T ss_pred EEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccc-cCcchHHHH--------HHHHHHHhcCCceEEEechhhhhc
Confidence 9999999999999999875 68 79999986543 344444443 233333455689999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCCCCCCeeeccCCCcchHHHHHHHHHHh
Q 023404 233 RPDGHPGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDTWNDLIMETVV 280 (282)
Q Consensus 233 R~DgHps~y~~~~~~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~L~ 280 (282)
|||||||+|++..+.++.+++..++||+||||||||||||||||++|+
T Consensus 339 R~DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 339 RKDGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred CCCCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 999999999876666677777889999999999999999999999996
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| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
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| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00