Query 023405
Match_columns 282
No_of_seqs 297 out of 2346
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 03:47:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023405.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023405hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0719 Molecular chaperone (D 100.0 4.9E-57 1.1E-61 400.5 17.5 247 24-275 9-260 (264)
2 COG0484 DnaJ DnaJ-class molecu 99.9 1E-27 2.2E-32 228.1 7.1 140 27-167 2-149 (371)
3 KOG0713 Molecular chaperone (D 99.9 3.1E-24 6.7E-29 200.3 7.4 93 25-117 12-110 (336)
4 PRK14288 chaperone protein Dna 99.9 1.6E-22 3.4E-27 194.2 7.6 128 28-157 2-135 (369)
5 KOG0712 Molecular chaperone (D 99.9 1.1E-22 2.3E-27 191.5 5.3 130 27-167 2-134 (337)
6 PRK14296 chaperone protein Dna 99.9 3.7E-22 8E-27 191.9 6.5 135 28-167 3-156 (372)
7 PTZ00037 DnaJ_C chaperone prot 99.8 1.5E-21 3.3E-26 190.3 6.9 129 27-166 26-156 (421)
8 PRK14286 chaperone protein Dna 99.8 1.5E-21 3.2E-26 187.7 6.8 139 28-166 3-156 (372)
9 KOG0717 Molecular chaperone (D 99.8 7.8E-21 1.7E-25 182.9 11.4 149 25-173 4-182 (508)
10 PRK14287 chaperone protein Dna 99.8 1.8E-21 3.9E-26 187.0 6.0 136 28-166 3-144 (371)
11 PRK14285 chaperone protein Dna 99.8 3E-21 6.5E-26 185.2 6.0 136 29-166 3-152 (365)
12 PRK14276 chaperone protein Dna 99.8 4.3E-21 9.4E-26 184.9 5.7 136 28-166 3-152 (380)
13 PRK14298 chaperone protein Dna 99.8 4.1E-21 8.9E-26 184.9 5.5 135 28-166 4-147 (377)
14 PRK14294 chaperone protein Dna 99.8 7.5E-21 1.6E-25 182.4 6.7 138 28-166 3-150 (366)
15 PRK14297 chaperone protein Dna 99.8 6.4E-21 1.4E-25 183.7 5.6 138 29-166 4-154 (380)
16 PRK14301 chaperone protein Dna 99.8 1.2E-20 2.6E-25 181.5 7.0 139 28-167 3-151 (373)
17 KOG0691 Molecular chaperone (D 99.8 4.3E-20 9.2E-25 172.0 8.8 90 28-120 4-93 (296)
18 PRK10767 chaperone protein Dna 99.8 2.2E-20 4.8E-25 179.4 7.0 136 28-166 3-148 (371)
19 PRK14299 chaperone protein Dna 99.8 6.1E-20 1.3E-24 171.2 9.7 129 28-157 3-151 (291)
20 PRK14282 chaperone protein Dna 99.8 1.5E-20 3.4E-25 180.4 5.6 138 28-166 3-158 (369)
21 PRK14280 chaperone protein Dna 99.8 2.5E-20 5.4E-25 179.4 5.5 136 29-167 4-150 (376)
22 PRK14278 chaperone protein Dna 99.8 9.4E-20 2E-24 175.6 9.3 126 29-157 3-134 (378)
23 PRK14291 chaperone protein Dna 99.8 4E-20 8.8E-25 178.3 5.6 138 28-166 2-162 (382)
24 PRK14279 chaperone protein Dna 99.8 7.3E-20 1.6E-24 177.1 7.2 69 28-96 8-76 (392)
25 PRK14277 chaperone protein Dna 99.8 2.3E-19 4.9E-24 173.4 9.8 130 28-157 4-150 (386)
26 TIGR02349 DnaJ_bact chaperone 99.8 5.7E-20 1.2E-24 175.4 5.5 137 30-167 1-150 (354)
27 PRK14295 chaperone protein Dna 99.8 6.7E-20 1.5E-24 177.2 6.0 134 28-166 8-172 (389)
28 PRK14283 chaperone protein Dna 99.8 8.2E-20 1.8E-24 175.9 6.4 132 28-166 4-152 (378)
29 PTZ00341 Ring-infected erythro 99.8 1.1E-18 2.4E-23 180.5 13.4 89 26-119 570-658 (1136)
30 PRK14281 chaperone protein Dna 99.8 6.1E-19 1.3E-23 170.9 8.8 69 29-97 3-71 (397)
31 KOG0716 Molecular chaperone (D 99.8 3.1E-19 6.6E-24 162.5 5.7 71 27-97 29-99 (279)
32 PRK14290 chaperone protein Dna 99.8 1.1E-18 2.3E-23 167.5 9.5 138 29-166 3-155 (365)
33 PRK14292 chaperone protein Dna 99.8 7.7E-19 1.7E-23 168.7 6.5 128 29-157 2-134 (371)
34 PRK14284 chaperone protein Dna 99.8 1.4E-18 3E-23 168.1 7.6 69 29-97 1-69 (391)
35 PRK14289 chaperone protein Dna 99.7 5.2E-18 1.1E-22 163.9 9.4 70 28-97 4-73 (386)
36 PF00226 DnaJ: DnaJ domain; I 99.7 3.7E-18 8E-23 124.0 6.1 63 30-92 1-64 (64)
37 PRK14293 chaperone protein Dna 99.7 6.2E-18 1.3E-22 162.7 8.9 137 29-166 3-149 (374)
38 PRK10266 curved DNA-binding pr 99.7 8.8E-18 1.9E-22 157.7 8.7 126 29-157 4-139 (306)
39 PRK14300 chaperone protein Dna 99.7 6.6E-18 1.4E-22 162.4 8.0 125 29-157 3-140 (372)
40 KOG0715 Molecular chaperone (D 99.7 8.1E-18 1.8E-22 156.9 7.0 69 29-98 43-111 (288)
41 KOG0718 Molecular chaperone (D 99.7 2.4E-17 5.2E-22 159.2 6.7 74 25-98 5-81 (546)
42 smart00271 DnaJ DnaJ molecular 99.6 3E-16 6.5E-21 112.1 6.3 58 29-86 1-59 (60)
43 PHA03102 Small T antigen; Revi 99.6 5E-16 1.1E-20 132.3 7.7 84 29-120 5-90 (153)
44 cd06257 DnaJ DnaJ domain or J- 99.6 1E-15 2.3E-20 107.3 6.6 55 30-84 1-55 (55)
45 COG2214 CbpA DnaJ-class molecu 99.6 8.1E-16 1.8E-20 132.7 7.2 69 26-94 3-72 (237)
46 TIGR03835 termin_org_DnaJ term 99.6 1.2E-15 2.7E-20 155.2 9.3 68 29-97 2-69 (871)
47 KOG0721 Molecular chaperone (D 99.6 1.2E-15 2.5E-20 135.4 7.1 73 27-99 97-169 (230)
48 PHA02624 large T antigen; Prov 99.6 5.2E-15 1.1E-19 148.8 8.7 103 28-138 10-116 (647)
49 COG5269 ZUO1 Ribosome-associat 99.5 3.4E-13 7.3E-18 123.3 14.2 176 22-197 36-243 (379)
50 KOG0722 Molecular chaperone (D 99.5 1.6E-14 3.4E-19 130.9 4.8 86 27-118 31-116 (329)
51 PRK05014 hscB co-chaperone Hsc 99.5 7.5E-14 1.6E-18 121.2 7.3 66 29-94 1-73 (171)
52 PRK01356 hscB co-chaperone Hsc 99.5 1.1E-13 2.3E-18 119.7 7.3 66 29-94 2-72 (166)
53 KOG0550 Molecular chaperone (D 99.5 6.5E-14 1.4E-18 134.4 5.5 106 11-117 355-461 (486)
54 PRK00294 hscB co-chaperone Hsc 99.4 2.3E-13 5.1E-18 118.3 7.8 68 27-94 2-76 (173)
55 PRK03578 hscB co-chaperone Hsc 99.4 2.8E-13 6.1E-18 118.1 7.8 66 28-93 5-77 (176)
56 KOG0624 dsRNA-activated protei 99.4 1.2E-13 2.6E-18 130.5 4.6 84 13-96 378-464 (504)
57 KOG0720 Molecular chaperone (D 99.3 9.3E-13 2E-17 127.5 5.6 68 27-95 233-300 (490)
58 KOG0714 Molecular chaperone (D 99.3 1.1E-12 2.4E-17 118.5 5.2 69 28-96 2-71 (306)
59 PRK09430 djlA Dna-J like membr 99.2 1.5E-11 3.2E-16 113.8 5.7 59 26-84 197-262 (267)
60 PTZ00100 DnaJ chaperone protei 99.2 3.5E-11 7.5E-16 98.1 5.1 52 28-83 64-115 (116)
61 COG5407 SEC63 Preprotein trans 99.1 1.2E-10 2.6E-15 112.9 5.9 73 28-100 97-174 (610)
62 PRK01773 hscB co-chaperone Hsc 99.1 3E-10 6.5E-15 98.9 7.3 65 29-93 2-73 (173)
63 KOG1150 Predicted molecular ch 99.0 4.9E-10 1.1E-14 98.8 7.7 66 27-92 51-117 (250)
64 TIGR00714 hscB Fe-S protein as 98.9 1.8E-09 3.9E-14 92.6 6.7 54 41-94 3-61 (157)
65 KOG1789 Endocytosis protein RM 98.0 6.3E-06 1.4E-10 87.2 5.6 55 26-83 1278-1336(2235)
66 KOG0568 Molecular chaperone (D 98.0 9E-06 1.9E-10 73.6 4.6 56 28-84 46-102 (342)
67 KOG0723 Molecular chaperone (D 97.2 0.00059 1.3E-08 54.9 5.0 50 31-84 58-107 (112)
68 KOG3192 Mitochondrial J-type c 96.8 0.0018 3.8E-08 55.5 4.7 68 26-93 5-79 (168)
69 KOG0431 Auxilin-like protein a 96.4 0.004 8.7E-08 62.0 4.6 59 22-80 365-446 (453)
70 COG1076 DjlA DnaJ-domain-conta 95.9 0.0046 1E-07 53.7 2.4 54 29-82 113-173 (174)
71 COG1076 DjlA DnaJ-domain-conta 95.5 0.011 2.3E-07 51.5 2.9 65 30-94 2-73 (174)
72 KOG0724 Zuotin and related mol 91.4 0.097 2.1E-06 49.6 1.6 58 40-97 3-64 (335)
73 PF03656 Pam16: Pam16; InterP 86.8 1.4 3E-05 36.7 5.0 52 30-85 59-110 (127)
74 PF13446 RPT: A repeated domai 74.4 6.8 0.00015 27.9 4.4 27 29-55 5-31 (62)
75 PF14687 DUF4460: Domain of un 73.8 7.3 0.00016 31.7 4.9 47 39-85 4-54 (112)
76 PF09851 SHOCT: Short C-termin 63.9 13 0.00028 23.1 3.5 26 242-271 5-30 (31)
77 PF11833 DUF3353: Protein of u 58.3 15 0.00032 32.7 4.1 37 38-82 1-37 (194)
78 COG5552 Uncharacterized conser 48.1 59 0.0013 24.8 5.3 37 28-64 2-38 (88)
79 PF10384 Scm3: Centromere prot 37.0 45 0.00097 24.0 3.1 18 235-252 11-28 (58)
80 COG3462 Predicted membrane pro 29.0 67 0.0015 26.2 3.2 25 243-271 92-116 (117)
81 PF12434 Malate_DH: Malate deh 23.6 87 0.0019 19.3 2.2 17 43-59 10-26 (28)
82 cd00084 HMG-box High Mobility 23.2 2.2E+02 0.0048 19.2 4.8 42 47-93 12-53 (66)
83 PF07709 SRR: Seven Residue Re 22.6 69 0.0015 16.3 1.5 13 71-83 2-14 (14)
84 PF10041 DUF2277: Uncharacteri 20.4 4E+02 0.0087 20.4 6.3 37 28-64 2-38 (78)
85 PF05120 GvpG: Gas vesicle pro 20.0 2.3E+02 0.0049 21.7 4.5 29 241-273 36-64 (79)
No 1
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.9e-57 Score=400.48 Aligned_cols=247 Identities=58% Similarity=0.912 Sum_probs=220.3
Q ss_pred CCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC
Q 023405 24 SSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPG--DEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD 101 (282)
Q Consensus 24 ~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~--~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~ 101 (282)
.+....|+|+||||.++||..+|++|||+|+|+||||+++. ..+|+++||+|+.||+||+|.++|+.||++|.+++
T Consensus 9 ~~f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd-- 86 (264)
T KOG0719|consen 9 GSFNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDD-- 86 (264)
T ss_pred ccccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCC--
Confidence 34556799999999999999999999999999999999963 24799999999999999999999999999999973
Q ss_pred cCCcccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHHHhhhcccCccCChHHHHHHHHHHH
Q 023405 102 LAGDVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRLFCSMLCSDQKLDSHRFKDILDETI 181 (282)
Q Consensus 102 ~~~~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i~~~v~~s~~~~de~R~~~ii~~~I 181 (282)
.+++-+.+|.+||+.+|..||.++|++|...|+||++|+.||+.+|+.++|+|.+||++||||++. |++||++||+.+|
T Consensus 87 ~~~d~~~~~~e~~~~iyk~VteedIeef~a~Y~gSEeEk~Dl~~~Y~k~kG~m~~i~~~~l~~d~~-De~R~keiid~~I 165 (264)
T KOG0719|consen 87 ESGDIDEDWLEFWRAIYKKVTEEDIEEFEANYQGSEEEKKDLLKLYNKFKGKMNRILESVLCSDPK-DEDRFKEIIDEAI 165 (264)
T ss_pred ccchhhhHHHHHHHHHHhhcccccHHHHHHHhcccHHHHHHHHHHHHhcCChHHHHHHhhhcCCcc-cHHHHHHHHHHHH
Confidence 567778899999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HcCCCcchhhhHHHHhhhhcCCCCCChhhhhh-h--hhcCChhHHHHHHHHHHHhhHHhHHHHHHHHHHHhCCCCCCCCC
Q 023405 182 AAGELKATKAYQKWAKKVSETKPPTSPLKRKA-K--SNKQSESDLYAVISERRSDRKDRFDSMFSSLVSKYGGAAAGSEP 258 (282)
Q Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-k--~~k~~~~~L~~li~~r~~~r~~~~~~~~~~Le~Ky~~~~~~~ep 258 (282)
.+|+|+.|++|.+|+++. +.++.+.++..+. + .++....||.++|++|+..|+.++++||++|++||++. ..++|
T Consensus 166 ~~Gev~~yK~y~~~~~~~-K~r~~~~~re~r~ak~~~~~~~~~DL~~~i~~r~~eRk~~~~sl~~SL~~kY~~~-~~s~~ 243 (264)
T KOG0719|consen 166 ADGEVKKYKAYEKWASEK-KMRAPKKAREKREAKVLAAKDNGIDLDAMIEKRGGERKGKFDSLLDSLEEKYGGN-ADSKP 243 (264)
T ss_pred hcCCchhhhhcccchhhh-hhccccchHHHHHHHHHHHHhcCccHHHHHHHHhhhhhhhHHHHHHHHHHHhccc-cccch
Confidence 999999999999999876 4444433332222 2 24556779999999999999999999999999999987 55689
Q ss_pred CHHHHHHHHHHHhhchh
Q 023405 259 TDEEFEAAQKKIENRRA 275 (282)
Q Consensus 259 ~~e~F~~~~~~~~~~~~ 275 (282)
..++|.++|++.+.+++
T Consensus 244 ~~~~~~aa~~~~ksk~~ 260 (264)
T KOG0719|consen 244 EREEFEAAQRPKKSKRS 260 (264)
T ss_pred hhhhhhhhcCccccccc
Confidence 99999999999877654
No 2
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1e-27 Score=228.09 Aligned_cols=140 Identities=36% Similarity=0.540 Sum_probs=111.0
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC--CcCC
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA--DLAG 104 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~--~~~~ 104 (282)
..+|||+||||+++||.+|||+|||+||++||||+|+.+++|.++|++|++||+|||||++|+.||++|..... .+.+
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg 81 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGG 81 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCC
Confidence 35899999999999999999999999999999999998999999999999999999999999999999987532 2111
Q ss_pred ---cccc-cHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCcc
Q 023405 105 ---DVVQ-NLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQK 167 (282)
Q Consensus 105 ---~~~~-~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~~ 167 (282)
.++. ++.++|..+|+.... .-..-...++|++.....-++|.+.+.|....| -..+.|+.|.
T Consensus 82 ~g~~~fgg~~~DIF~~~FgGg~~-~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~ 149 (371)
T COG0484 82 FGFGGFGGDFGDIFEDFFGGGGG-GRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCH 149 (371)
T ss_pred CCcCCCCCCHHHHHHHhhcCCCc-ccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCC
Confidence 1122 589999999963211 000112367899988888899999999987544 4456677765
No 3
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=3.1e-24 Score=200.35 Aligned_cols=93 Identities=46% Similarity=0.704 Sum_probs=78.1
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC----
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA---- 100 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~---- 100 (282)
....+|||+||||+++|+..+||+|||+|||+||||+||++|.|.+.|+.|+.||+|||||.+|+.||.+|...-.
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~ 91 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENK 91 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccc
Confidence 3457999999999999999999999999999999999999999999999999999999999999999999965211
Q ss_pred CcCCcc--cccHHHHHHHh
Q 023405 101 DLAGDV--VQNLKEFFGAM 117 (282)
Q Consensus 101 ~~~~~~--~~~~~~~f~~~ 117 (282)
...+++ ...|..||..+
T Consensus 92 ~~~~g~~~~~~f~~~f~df 110 (336)
T KOG0713|consen 92 DGEGGGGGNDIFSAFFGDF 110 (336)
T ss_pred ccccCCcccchHHHhhccc
Confidence 111222 34566666654
No 4
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=1.6e-22 Score=194.20 Aligned_cols=128 Identities=31% Similarity=0.485 Sum_probs=94.6
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcC--Cc
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLA--GD 105 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~--~~ 105 (282)
..|||+||||+++||.++||+|||+||++||||+++.+++|.++|++|++||+||+||.+|+.||.+|........ +.
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~~~ 81 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCCcc
Confidence 3799999999999999999999999999999999987788999999999999999999999999999974211101 11
Q ss_pred c----cccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH
Q 023405 106 V----VQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL 157 (282)
Q Consensus 106 ~----~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i 157 (282)
+ +.+|.++|..+|+..... .......+|.+.+...-+.+.+.|.|....|
T Consensus 82 ~~~~~f~~~~~~F~~~fg~g~~~--~~~~~~~~g~di~~~l~vslee~~~G~~~~i 135 (369)
T PRK14288 82 DFSDFFEDLGSFFEDAFGFGARG--SKRQKSSIAPDYLQTIELSFKEAVFGCKKTI 135 (369)
T ss_pred ccccchhhHHHHHHhhcCCCCcc--cCcCCCCCCCCeeEeccccHHHHhCCeEEEE
Confidence 1 223445677666521000 0001123567777777778888888876544
No 5
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=1.1e-22 Score=191.54 Aligned_cols=130 Identities=38% Similarity=0.606 Sum_probs=96.4
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC-cCCc
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD-LAGD 105 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~-~~~~ 105 (282)
..+.||+||||+++||.+|||+|||+||++||||+||. |.++|++|+.||+|||||++|..||++|...... ..+.
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~ 78 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG 78 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC
Confidence 35789999999999999999999999999999999976 8899999999999999999999999999753221 1223
Q ss_pred ccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCcc
Q 023405 106 VVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQK 167 (282)
Q Consensus 106 ~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~~ 167 (282)
++..|.+||. |+.. .....+||++.....-+.+-+.|.|....+ -.+++|+.|.
T Consensus 79 g~~~f~~~F~--~g~~------~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~ 134 (337)
T KOG0712|consen 79 GFGGFSQFFG--FGGN------GGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCS 134 (337)
T ss_pred CCccHHHhcc--CCCc------CccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCC
Confidence 3334555555 3322 234566688877776566666677754433 3445666553
No 6
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.86 E-value=3.7e-22 Score=191.87 Aligned_cols=135 Identities=28% Similarity=0.431 Sum_probs=99.4
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC---Cc--
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA---DL-- 102 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~---~~-- 102 (282)
..|||+||||+++||.++||+|||+||++||||+|+ ++.|.++|++|++||+|||||.+|+.||.+|..... ..
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~ 81 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSS 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCc
Confidence 479999999999999999999999999999999996 477999999999999999999999999999864211 00
Q ss_pred --CC----------cccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCcc
Q 023405 103 --AG----------DVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQK 167 (282)
Q Consensus 103 --~~----------~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~~ 167 (282)
.+ .++.+|.++|..+|+.... ......+|.+.+...-+++.+.|.|....| -..+.|..|.
T Consensus 82 ~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~----~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~ 156 (372)
T PRK14296 82 NFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKS----DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCF 156 (372)
T ss_pred CCCccccccccccccccccchhhhhhhcCCCcc----CCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCC
Confidence 00 0122355677777753100 001224577777787788888899987655 2345555553
No 7
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.84 E-value=1.5e-21 Score=190.27 Aligned_cols=129 Identities=31% Similarity=0.552 Sum_probs=97.3
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcCCcc
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGDV 106 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~~~~ 106 (282)
...+||+||||+++||.++||+|||+||++||||++++ .++|+.|++||+|||||.+|+.||.+|...... +.+
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~--~~~ 99 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEG--GEQ 99 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhccc--CCC
Confidence 35799999999999999999999999999999999852 379999999999999999999999998742211 112
Q ss_pred cccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 107 VQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 107 ~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
..+|.++|..+|+.... .....+|.+.....-+.+-+.|.|....| -..+.|..|
T Consensus 100 ~~d~~d~f~~~Fggg~~-----~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C 156 (421)
T PTZ00037 100 PADASDLFDLIFGGGRK-----PGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANC 156 (421)
T ss_pred CcchhhhHHHhhccccc-----cccccCCCCEEEEeeeeHHHHhCCCceEEEeecccccccc
Confidence 24577888888874210 01234577777776677778888887654 334555544
No 8
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=1.5e-21 Score=187.67 Aligned_cols=139 Identities=31% Similarity=0.494 Sum_probs=101.2
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC----CcC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA----DLA 103 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~----~~~ 103 (282)
..|||+||||+++||.++||+|||+||++||||+++.+++|.++|++|++||+||+||.+|+.||.+|..... ...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 3699999999999999999999999999999999987788999999999999999999999999999864211 000
Q ss_pred -C--cc----cccHHHHHHHhhccCCHHHH--HhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 104 -G--DV----VQNLKEFFGAMYKKVTEADI--EEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 104 -~--~~----~~~~~~~f~~~f~~~t~~~i--~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
+ .+ +.+|.++|..||+......- .......+|.+.+...-+.+.+.|.|....| -..+.|..|
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C 156 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDC 156 (372)
T ss_pred CCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCC
Confidence 0 01 23566888888863210000 0001124677777776677777788886654 334555544
No 9
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=7.8e-21 Score=182.95 Aligned_cols=149 Identities=30% Similarity=0.477 Sum_probs=109.9
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhcCChhHHHhhhccCC------C
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYDQTGC------V 97 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~-~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~------~ 97 (282)
+...++||+||||.++|++.+||++||+|||+||||+||.. .+|++.|+.|+.||+|||||..|++||.+.. .
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~~ 83 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGKN 83 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCCC
Confidence 45678999999999999999999999999999999998765 4899999999999999999999999999843 1
Q ss_pred CCCCc--------------C--CcccccHHHHHHHhhccCCHHHHHhhh------hccCCCchhhhHHHHHHHHhcChh-
Q 023405 98 DDADL--------------A--GDVVQNLKEFFGAMYKKVTEADIEEFE------ANYRGSDSEKKDLIDLYKKYKGNM- 154 (282)
Q Consensus 98 ~~~~~--------------~--~~~~~~~~~~f~~~f~~~t~~~i~~f~------~~yrgs~ee~~dl~~~y~~~~G~~- 154 (282)
.+.+. . ++....|+..+..+|-.+..++|.... .-+..+......++.+|..|-+.-
T Consensus 84 s~~~~~~~dlf~ff~~~~y~gy~~~~~gfy~vy~dvf~~~~~~e~~~~~d~~~~ap~fg~~~t~ye~~~~fY~~W~afsT 163 (508)
T KOG0717|consen 84 SDTGVQIEDLFQFFTSSCYIGYENTSAGFYRVYQDVFNALASDELPFLGDSKLLYPLFGYSTTDYEQVVPFYQFWLAFST 163 (508)
T ss_pred CccccchHHHHHHhhhhhhcccccccchhHHHHHHHHHHHhhhhhhhccCCccccccccCCCCcHHHHHHHHHHHHhhhh
Confidence 11000 0 122234666666677666666665321 233446777788889999887764
Q ss_pred hHHHhhhcccCccCChHHH
Q 023405 155 NRLFCSMLCSDQKLDSHRF 173 (282)
Q Consensus 155 ~~i~~~v~~s~~~~de~R~ 173 (282)
.+-|.++-..++....+|+
T Consensus 164 ~Ksf~W~d~Ydv~~~~~r~ 182 (508)
T KOG0717|consen 164 KKSFEWLDEYDVEEESDRF 182 (508)
T ss_pred hhhHHhhhhhhhhhhhhHH
Confidence 4557777766665344444
No 10
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=1.8e-21 Score=187.04 Aligned_cols=136 Identities=29% Similarity=0.472 Sum_probs=100.2
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC-c---C
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD-L---A 103 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~-~---~ 103 (282)
..|||+||||+++||.++||+|||+||++||||+++ .++|.++|+.|++||+||+||.+|+.||.+|...... . .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGG 81 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCC
Confidence 369999999999999999999999999999999996 4778899999999999999999999999999753211 1 1
Q ss_pred CcccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 104 GDVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 104 ~~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
..++.+|.++|+.||+..... .......+|.+.+...-+++.+.|.|....| -..++|..|
T Consensus 82 ~~~f~~~~d~f~~~fgg~~~~--~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C 144 (371)
T PRK14287 82 AGDFGGFSDIFDMFFGGGGGR--RNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTC 144 (371)
T ss_pred CccccchHHHHHhhhccccCC--CCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCC
Confidence 112345778899998741100 0001123567777776677777888886644 334556555
No 11
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=3e-21 Score=185.16 Aligned_cols=136 Identities=33% Similarity=0.579 Sum_probs=100.4
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC---C---c
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA---D---L 102 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~---~---~ 102 (282)
.|||+||||+++||.++||+|||+||++||||+++.+++|.++|++|++||+||+||.+|..||.+|..... . +
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~~ 82 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcccc
Confidence 699999999999999999999999999999999988888999999999999999999999999999874211 0 0
Q ss_pred -CC-c----ccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 103 -AG-D----VVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 103 -~~-~----~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
.+ + .+.+|.++|..||+...... .-....+|.+.+...-+.+.+.|.|....| -..++|..|
T Consensus 83 ~~g~~~~~~~~~~~~d~f~~~fgg~~~~~--~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C 152 (365)
T PRK14285 83 SGGFSGFSDIFEDFGDIFDSFFTGNRGQD--KNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESC 152 (365)
T ss_pred CCCccccccccccHHHHHHHhhcCCcCCC--CCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCC
Confidence 00 0 12357788998887410000 001124677777776667777778887654 334555544
No 12
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=4.3e-21 Score=184.92 Aligned_cols=136 Identities=29% Similarity=0.476 Sum_probs=99.9
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC------
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD------ 101 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~------ 101 (282)
..|||+||||+++||.++||+|||+||++||||+++ ++.|.++|+.|++||+||+||.+|+.||.+|......
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence 369999999999999999999999999999999996 4678999999999999999999999999998642110
Q ss_pred --cCC----cccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 102 --LAG----DVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 102 --~~~----~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
..+ .++.+|.++|..||+.... . .......+|.+.+...-+++.+.|.|....| ...+.|..|
T Consensus 82 ~~~~~~~~~~~~~~~~d~f~~~fgg~~~-~-~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C 152 (380)
T PRK14276 82 GGFGGFDGSGGFGGFEDIFSSFFGGGGA-R-RNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTC 152 (380)
T ss_pred CCCCCccccccccchhhHHHHHhCcccc-c-cCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCC
Confidence 000 1223567888988863110 0 0011123577777776677777788886544 445666655
No 13
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=4.1e-21 Score=184.95 Aligned_cols=135 Identities=33% Similarity=0.490 Sum_probs=100.5
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC-C-----
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA-D----- 101 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~-~----- 101 (282)
..|||+||||+++||.++||+|||+||++||||+++ ++.|.++|++|++||+||+||.+|+.||.+|..... .
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAED 82 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCccc
Confidence 469999999999999999999999999999999996 467889999999999999999999999999864211 0
Q ss_pred -cCCcccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 102 -LAGDVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 102 -~~~~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
+.+.++.+|.++|..||+..... ......+|.+.+...-+++.+.|.|....| -..+.|..|
T Consensus 83 ~~~~~~~~~~~d~f~~~Fgg~~~~---~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C 147 (377)
T PRK14298 83 IFRGADFGGFGDIFEMFFGGGGRR---GRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTC 147 (377)
T ss_pred ccccCCcCcchhhhHhhhcCCCcc---CCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCC
Confidence 11112345678899888741100 001124677777777677778888887654 334556544
No 14
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=7.5e-21 Score=182.41 Aligned_cols=138 Identities=31% Similarity=0.517 Sum_probs=100.8
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC--CcCC-
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA--DLAG- 104 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~--~~~~- 104 (282)
..|||+||||+++||.++||+|||+||++||||+++.++.|.++|+.|++||+||+||.+|+.||.+|...-. ...+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~~ 82 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGF 82 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCCc
Confidence 4799999999999999999999999999999999987788999999999999999999999999999864211 1111
Q ss_pred cc----cccHHHHHHHhhc-cCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 105 DV----VQNLKEFFGAMYK-KVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 105 ~~----~~~~~~~f~~~f~-~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
.+ +.+|.++|..+|+ ...... .......+|.+.+...-+.+.+.|.|....| -..++|..|
T Consensus 83 ~~~~~~~~~~~d~f~~~fg~g~~~~~-~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C 150 (366)
T PRK14294 83 SGFDDIFSSFGDIFEDFFGFGGGRRG-RSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEEC 150 (366)
T ss_pred CccccchhhhhhhHHHhhccCCCcCC-cccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCC
Confidence 11 2346677888886 210000 0001123567777777778888888987654 334555544
No 15
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=6.4e-21 Score=183.70 Aligned_cols=138 Identities=33% Similarity=0.517 Sum_probs=100.1
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC---CcC--
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA---DLA-- 103 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~---~~~-- 103 (282)
.|||+||||+++||.++||+|||+||++||||+++.+++|.++|+.|++||+||+||.+|+.||.+|..... ...
T Consensus 4 ~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~~ 83 (380)
T PRK14297 4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSG 83 (380)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCCC
Confidence 699999999999999999999999999999999987788999999999999999999999999999874311 000
Q ss_pred C-cc-----cccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 104 G-DV-----VQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 104 ~-~~-----~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
+ .+ +.+|.++|+.+|+......-.......+|.+.+...-+++.+.|.|....| -..+.|..|
T Consensus 84 ~~~~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C 154 (380)
T PRK14297 84 GFGGFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETC 154 (380)
T ss_pred CCCCcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCc
Confidence 0 00 124678888888741000000001123567777776677777888887654 334555544
No 16
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=1.2e-20 Score=181.46 Aligned_cols=139 Identities=35% Similarity=0.549 Sum_probs=101.0
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC------
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD------ 101 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~------ 101 (282)
..|||+||||+++||.++||+|||+||++||||+++.+++|.++|+.|++||+||+||.+|+.||.+|...-..
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g 82 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG 82 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence 37999999999999999999999999999999999887889999999999999999999999999998642110
Q ss_pred cCC--cccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCcc
Q 023405 102 LAG--DVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQK 167 (282)
Q Consensus 102 ~~~--~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~~ 167 (282)
+.+ +.+..|.++|..+|+......- .-....+|.+.+...-+++.+.|.|....| -..+.|..|.
T Consensus 83 ~~~~~~~~~~f~d~f~~~fg~g~~~~~-~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~ 151 (373)
T PRK14301 83 FSSAEDIFSHFSDIFGDLFGFSGGGSR-RGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCG 151 (373)
T ss_pred cccccccccchHHHHHHHhhccCcccc-cCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCC
Confidence 100 1123466778877751100000 001123567777777778888888887654 3345665553
No 17
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=4.3e-20 Score=171.98 Aligned_cols=90 Identities=42% Similarity=0.673 Sum_probs=82.1
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcCCccc
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGDVV 107 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~~~~~ 107 (282)
.+|||+||||+++||..+|++|||..+|+||||+||++|.|.++|+.|.+||+||+|+..|..||..|...- ..+.+
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~---~~~~~ 80 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGS---SAQGR 80 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcc---cchhh
Confidence 689999999999999999999999999999999999999999999999999999999999999999987532 22356
Q ss_pred ccHHHHHHHhhcc
Q 023405 108 QNLKEFFGAMYKK 120 (282)
Q Consensus 108 ~~~~~~f~~~f~~ 120 (282)
.++.++|+..|+.
T Consensus 81 ~d~~~~~r~~f~~ 93 (296)
T KOG0691|consen 81 EDQADGFRKKFGS 93 (296)
T ss_pred hhHHHHHHHHhhh
Confidence 7899999998874
No 18
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=2.2e-20 Score=179.37 Aligned_cols=136 Identities=37% Similarity=0.607 Sum_probs=99.1
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC------
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD------ 101 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~------ 101 (282)
..|||+||||+++||.++||+|||+||++||||+++.++.|.++|+.|++||+||+||.+|..||.+|......
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 82 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG 82 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence 46999999999999999999999999999999999877889999999999999999999999999998642110
Q ss_pred cCC-ccccc-HHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 102 LAG-DVVQN-LKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 102 ~~~-~~~~~-~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
+.+ .++.+ |.++|..+|+..... ......+|.+.+...-+++.+.|.|....| -..+.|..|
T Consensus 83 ~~~~~~~~~~f~~~f~~~fgg~~~~---~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C 148 (371)
T PRK10767 83 FGGGGGFGDIFGDIFGDIFGGGRGG---GRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTC 148 (371)
T ss_pred CCCccccccchhhhhhhhccCCccc---cCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCC
Confidence 001 01222 667788777531000 001123567777666667777788886654 345556544
No 19
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=6.1e-20 Score=171.18 Aligned_cols=129 Identities=34% Similarity=0.572 Sum_probs=96.4
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC----C--
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA----D-- 101 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~----~-- 101 (282)
..|||+||||+++||.++||+|||+||++||||+++ ++.+.++|+.|++||+||+||.+|..||.+|..... .
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 369999999999999999999999999999999996 577899999999999999999999999999874210 0
Q ss_pred --------cCCcccccHHHHHHHhhccCCH----HHH-Hhh-hhccCCCchhhhHHHHHHHHhcChhhHH
Q 023405 102 --------LAGDVVQNLKEFFGAMYKKVTE----ADI-EEF-EANYRGSDSEKKDLIDLYKKYKGNMNRL 157 (282)
Q Consensus 102 --------~~~~~~~~~~~~f~~~f~~~t~----~~i-~~f-~~~yrgs~ee~~dl~~~y~~~~G~~~~i 157 (282)
+.+..+.+|.++|..+|+.... .+. ..+ ....+|.+.+....+++.+.+.|+...|
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i 151 (291)
T PRK14299 82 PGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVV 151 (291)
T ss_pred CCCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEE
Confidence 0011124678899999874210 000 000 1123567777777788888888876554
No 20
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=1.5e-20 Score=180.42 Aligned_cols=138 Identities=32% Similarity=0.550 Sum_probs=96.1
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC-----
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD----- 101 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~-~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~----- 101 (282)
..|||+||||+++||.++||+|||+||++||||+++.+ +.|.++|++|++||+||+||.+|+.||.+|......
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 46999999999999999999999999999999999764 678999999999999999999999999998643210
Q ss_pred cCCcc-----cccH-----HHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 102 LAGDV-----VQNL-----KEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 102 ~~~~~-----~~~~-----~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
..+.+ +..| .++|..+|+...... .......+|.+.+...-+++.+.|.|....| -..+.|..|
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~-~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C 158 (369)
T PRK14282 83 ESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQE-EQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHC 158 (369)
T ss_pred CCCCcccccccccccccccchhhhHhhcccCCcc-cccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCC
Confidence 00111 1112 156666665311000 0001123566666666667777788887654 334555554
No 21
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=2.5e-20 Score=179.45 Aligned_cols=136 Identities=31% Similarity=0.510 Sum_probs=98.7
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC-cC--C-
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD-LA--G- 104 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~-~~--~- 104 (282)
.|||+||||+++||.++||+|||+||++||||+++ ++.|.++|++|++||+||+||.+|+.||.+|...... .. +
T Consensus 4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~ 82 (376)
T PRK14280 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF 82 (376)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence 69999999999999999999999999999999996 4678999999999999999999999999998642110 00 0
Q ss_pred --cccc---cHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCcc
Q 023405 105 --DVVQ---NLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQK 167 (282)
Q Consensus 105 --~~~~---~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~~ 167 (282)
.++. +|.++|..||+..... .......+|.+.+...-+++.+.|.|....| -..++|..|.
T Consensus 83 ~~~~~~~~~~~~d~f~~~fgg~~~~--~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~ 150 (376)
T PRK14280 83 GGGDFGGGFGFEDIFSSFFGGGGRR--RDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCH 150 (376)
T ss_pred CCCCccccccchhhHHHHhCCcccc--CcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCC
Confidence 1111 4667888888631100 0001123566777776677777788887654 3345665553
No 22
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=9.4e-20 Score=175.57 Aligned_cols=126 Identities=37% Similarity=0.505 Sum_probs=93.6
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC-c--C--
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD-L--A-- 103 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~-~--~-- 103 (282)
.|||+||||+++||.++||+|||+||++||||+++ +++|.++|+.|++||+||+||.+|..||.+|...... . .
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~ 81 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGF 81 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCC
Confidence 69999999999999999999999999999999997 5789999999999999999999999999998631110 0 0
Q ss_pred CcccccHHHHHHHhhccCCHHHHHhh-hhccCCCchhhhHHHHHHHHhcChhhHH
Q 023405 104 GDVVQNLKEFFGAMYKKVTEADIEEF-EANYRGSDSEKKDLIDLYKKYKGNMNRL 157 (282)
Q Consensus 104 ~~~~~~~~~~f~~~f~~~t~~~i~~f-~~~yrgs~ee~~dl~~~y~~~~G~~~~i 157 (282)
+.++.++.++|..||+..... ... ....+|.+.+...-+++.+.|.|....|
T Consensus 82 ~~~f~~~~d~f~~ffgg~g~~--~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i 134 (378)
T PRK14278 82 GGGFGGLGDVFEAFFGGGAAS--RGPRGRVRPGSDSLLRMRLDLEECATGVTKQV 134 (378)
T ss_pred CcCcCchhHHHHHHhCCCCCC--CCCccCCCCCCCeEEEEEEEHHHhcCCeEEEE
Confidence 112345678888888742100 000 0123566777666667777777876544
No 23
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=4e-20 Score=178.31 Aligned_cols=138 Identities=35% Similarity=0.537 Sum_probs=94.5
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC----cC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD----LA 103 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~----~~ 103 (282)
..|||+||||+++||.++||+|||+||++||||+|+. +.|.++|+.|++||+||+||.+|+.||.+|...... ..
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 3699999999999999999999999999999999974 778899999999999999999999999998642110 00
Q ss_pred C-c-----ccccHHHHHHHhhccCCHHH-HHh----------hhhccCCCchhhhHHHHHHHHhcChhhHH--Hhhhccc
Q 023405 104 G-D-----VVQNLKEFFGAMYKKVTEAD-IEE----------FEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCS 164 (282)
Q Consensus 104 ~-~-----~~~~~~~~f~~~f~~~t~~~-i~~----------f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s 164 (282)
+ . .+.++.++|..+|+.+.... ... .....+|.+.+...-+++.+.|.|....| ...+.|.
T Consensus 81 ~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~ 160 (382)
T PRK14291 81 GQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCE 160 (382)
T ss_pred cccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCC
Confidence 0 0 11245566666642110000 000 01122466666665566777777876554 3345555
Q ss_pred Cc
Q 023405 165 DQ 166 (282)
Q Consensus 165 ~~ 166 (282)
.|
T Consensus 161 ~C 162 (382)
T PRK14291 161 AC 162 (382)
T ss_pred CC
Confidence 44
No 24
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=7.3e-20 Score=177.10 Aligned_cols=69 Identities=51% Similarity=0.791 Sum_probs=66.4
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
..|||+||||+++||.++||+|||+||++||||+++.++.|.++|+.|++||+|||||.+|+.||.+|.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 479999999999999999999999999999999998888899999999999999999999999999975
No 25
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=2.3e-19 Score=173.36 Aligned_cols=130 Identities=33% Similarity=0.545 Sum_probs=91.9
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC--Cc---
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA--DL--- 102 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~--~~--- 102 (282)
..|||+||||+++||.++||+|||+||++||||+++.++.|.++|+.|++||+||+||.+|..||.+|..... ..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 4799999999999999999999999999999999987788999999999999999999999999999864211 00
Q ss_pred ----CC---c--c--cccHHHHHHHhhccCCHHH-HHhhhhccCCCchhhhHHHHHHHHhcChhhHH
Q 023405 103 ----AG---D--V--VQNLKEFFGAMYKKVTEAD-IEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL 157 (282)
Q Consensus 103 ----~~---~--~--~~~~~~~f~~~f~~~t~~~-i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i 157 (282)
.+ . . +.++.++|..+|+...... -......-+|.+.+...-+.+.+.|.|....|
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v 150 (386)
T PRK14277 84 GFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEI 150 (386)
T ss_pred CcCCCCccccCccccccchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEE
Confidence 00 0 0 1234455666665310000 00000112566776666667777777876544
No 26
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.79 E-value=5.7e-20 Score=175.41 Aligned_cols=137 Identities=33% Similarity=0.487 Sum_probs=98.2
Q ss_pred ccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC--cC-Cc-
Q 023405 30 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD--LA-GD- 105 (282)
Q Consensus 30 d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~--~~-~~- 105 (282)
|||+||||+++||.++||+|||+||++||||+++ .+.|.++|+.|++||+||+||.+|..||.+|...... .. +.
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~ 79 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCC
Confidence 6999999999999999999999999999999996 5678899999999999999999999999998653211 00 10
Q ss_pred -------ccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCcc
Q 023405 106 -------VVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQK 167 (282)
Q Consensus 106 -------~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~~ 167 (282)
++.++.++|..||+.............-+|.+.+...-+++.+.|.|....| -..+.|..|.
T Consensus 80 ~~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~ 150 (354)
T TIGR02349 80 FNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCH 150 (354)
T ss_pred cCCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCC
Confidence 2345678888888742100000001123566666666667777778886654 3456665553
No 27
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=6.7e-20 Score=177.20 Aligned_cols=134 Identities=34% Similarity=0.533 Sum_probs=94.4
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhc----cCCCCCCC--
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ----TGCVDDAD-- 101 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~----~G~~~~~~-- 101 (282)
..|||+||||+++||.++||+|||+||++||||+++.++.|.++|+.|++||+||+||.+|+.||. +|...-..
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~~ 87 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPGP 87 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccCC
Confidence 469999999999999999999999999999999998778899999999999999999999999998 77532100
Q ss_pred c-C-Cccc---------------------ccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH-
Q 023405 102 L-A-GDVV---------------------QNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL- 157 (282)
Q Consensus 102 ~-~-~~~~---------------------~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i- 157 (282)
. . +.++ ..|.++|..+|+... ......+|.+.+...-+++.+.|.|....|
T Consensus 88 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~-----~~~~~~~g~di~~~l~lsLee~~~G~~k~i~ 162 (389)
T PRK14295 88 GGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGG-----RRTQPRRGADVESEVTLSFTEAIDGATVPLR 162 (389)
T ss_pred CCCCCCCCCcccccccccccccccccccccchhhhhcccccCCC-----CCCCCCCCCCEEEEEEEEHHHHhCCceEEEE
Confidence 0 0 0000 013344555443210 001123566777676677777788887654
Q ss_pred -HhhhcccCc
Q 023405 158 -FCSMLCSDQ 166 (282)
Q Consensus 158 -~~~v~~s~~ 166 (282)
-..++|..|
T Consensus 163 ~~r~~~C~~C 172 (389)
T PRK14295 163 LTSQAPCPAC 172 (389)
T ss_pred eeccccCCCC
Confidence 334555544
No 28
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=8.2e-20 Score=175.92 Aligned_cols=132 Identities=33% Similarity=0.494 Sum_probs=92.2
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcCC---
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAG--- 104 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~~--- 104 (282)
..|||+||||+++||.++||+|||+||++||||+|+. +.|.++|+.|++||+||+||.+|..||.+|......+..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~~~ 82 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQEDI 82 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccccccc
Confidence 5799999999999999999999999999999999974 779999999999999999999999999998642111000
Q ss_pred ---ccc----c----cHHHHHHHh-hccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 105 ---DVV----Q----NLKEFFGAM-YKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 105 ---~~~----~----~~~~~f~~~-f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
..+ . +|.++|..+ |+... . ...-+|.+.+...-+++.+.|.|....| -..+.|..|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~-----~-~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C 152 (378)
T PRK14283 83 FNNINFEDIFQGFGFGIGNIFDMFGFGGGS-----R-HGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVC 152 (378)
T ss_pred ccccCccccccccccchhhhccccccCCCC-----C-CCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCC
Confidence 000 0 122223322 22100 0 0112466666666677777888987654 334566554
No 29
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.78 E-value=1.1e-18 Score=180.54 Aligned_cols=89 Identities=30% Similarity=0.538 Sum_probs=74.0
Q ss_pred CCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcCCc
Q 023405 26 SNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGD 105 (282)
Q Consensus 26 ~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~~~ 105 (282)
..+++||+||||+++||..+||+|||+||++||||+++.+ .|..+|+.|+.||+|||||.+|+.||.+|..+ +.+.
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G---l~~~ 645 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDG---IKGV 645 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccc---cCCC
Confidence 3568999999999999999999999999999999999865 68899999999999999999999999999743 2222
Q ss_pred ccccHHHHHHHhhc
Q 023405 106 VVQNLKEFFGAMYK 119 (282)
Q Consensus 106 ~~~~~~~~f~~~f~ 119 (282)
++-+...|| .+|+
T Consensus 646 ~~iDP~~Ff-mlFg 658 (1136)
T PTZ00341 646 NFIHPSIFY-LLAS 658 (1136)
T ss_pred CccCHHHHH-HHhh
Confidence 333444455 4554
No 30
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=6.1e-19 Score=170.95 Aligned_cols=69 Identities=52% Similarity=0.900 Sum_probs=66.2
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.|||+||||+++||.++||+|||+||++||||+++.++.|.++|+.|++||+||+||.+|..||.+|..
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~ 71 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHA 71 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccch
Confidence 699999999999999999999999999999999987788999999999999999999999999999874
No 31
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=3.1e-19 Score=162.54 Aligned_cols=71 Identities=49% Similarity=0.802 Sum_probs=68.3
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
...++|+||||+++||.++||++||+|+++||||+++++|++.++|.+|+.||+||+||.+|..||.+|.+
T Consensus 29 ~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~ 99 (279)
T KOG0716|consen 29 IRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGEL 99 (279)
T ss_pred chhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999875
No 32
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=1.1e-18 Score=167.49 Aligned_cols=138 Identities=35% Similarity=0.565 Sum_probs=96.2
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC----cC
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDE-EAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD----LA 103 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~-~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~----~~ 103 (282)
.|||+||||+++||.++|++|||+|+++||||+++.++ .|.++|+.|++||+||+||.+|..||.+|...... +.
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~ 82 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN 82 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence 69999999999999999999999999999999998664 79999999999999999999999999998752110 00
Q ss_pred Cc---ccccHHHHHHHhhccCCHHHH-Hh--hhhcc--CCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 104 GD---VVQNLKEFFGAMYKKVTEADI-EE--FEANY--RGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 104 ~~---~~~~~~~~f~~~f~~~t~~~i-~~--f~~~y--rgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
.. .+.++.++|..+|+.....+. .. ..... +|.+.+...-+++-+.|.|....| -..+.|..|
T Consensus 83 ~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C 155 (365)
T PRK14290 83 WDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDC 155 (365)
T ss_pred ccccccccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCC
Confidence 01 124567888888874200000 00 00011 255666665567777777876543 223445443
No 33
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=7.7e-19 Score=168.74 Aligned_cols=128 Identities=38% Similarity=0.538 Sum_probs=92.4
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCc-CCcc-
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADL-AGDV- 106 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~-~~~~- 106 (282)
.|||+||||+++||.++||+|||+|+++||||+++ ++.|.++|+.|++||+||+||.+|+.||.+|....... .+..
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~ 80 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPF 80 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCccc
Confidence 48999999999999999999999999999999996 56789999999999999999999999999987431100 0011
Q ss_pred ---cccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH
Q 023405 107 ---VQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL 157 (282)
Q Consensus 107 ---~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i 157 (282)
..++.++|..+|+......-.......+|.+.+...-+++-+.|.|....|
T Consensus 81 ~~~~~d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v 134 (371)
T PRK14292 81 GGMGFDPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEV 134 (371)
T ss_pred CccCCChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEE
Confidence 124568888888742100000001123566777666667777777876543
No 34
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=1.4e-18 Score=168.09 Aligned_cols=69 Identities=51% Similarity=0.855 Sum_probs=66.0
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.|||+||||+++||+++||+|||+||++||||++++++.|.++|+.|++||+||+||.+|+.||.+|..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 69 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD 69 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence 489999999999999999999999999999999988888999999999999999999999999999864
No 35
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=5.2e-18 Score=163.85 Aligned_cols=70 Identities=54% Similarity=0.878 Sum_probs=67.1
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
..|||+||||+++||.+||++|||+||++||||+++.+++|.++|+.|++||+||+||.+|+.||.+|..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~ 73 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA 73 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence 4799999999999999999999999999999999988888999999999999999999999999999874
No 36
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.74 E-value=3.7e-18 Score=124.01 Aligned_cols=63 Identities=52% Similarity=0.860 Sum_probs=60.1
Q ss_pred ccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHhcCChhHHHhhh
Q 023405 30 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDE-EAKEKFQQLQKVISILGDEEKRALYD 92 (282)
Q Consensus 30 d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~-~a~~~F~~I~~AY~iLsdp~~R~~YD 92 (282)
|||+||||+++++.++|+++|+++++.+|||+++... .+...|..|+.||++|+||.+|..||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999987665 68999999999999999999999998
No 37
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=6.2e-18 Score=162.74 Aligned_cols=137 Identities=27% Similarity=0.451 Sum_probs=93.5
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCC---cCC-
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDAD---LAG- 104 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~---~~~- 104 (282)
.|||+||||+++||.++|++|||+|+++||||+++ ++.|.++|+.|++||+||+||.+|+.||.+|...... ..+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~ 81 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDM 81 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCc
Confidence 69999999999999999999999999999999996 4668899999999999999999999999998642110 010
Q ss_pred cccccHHHHHHHhhccCCHHHH----HhhhhccCCCchhhhHHHHHHHHhcChhhHH--HhhhcccCc
Q 023405 105 DVVQNLKEFFGAMYKKVTEADI----EEFEANYRGSDSEKKDLIDLYKKYKGNMNRL--FCSMLCSDQ 166 (282)
Q Consensus 105 ~~~~~~~~~f~~~f~~~t~~~i----~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i--~~~v~~s~~ 166 (282)
.++..|.++|..+|+......- ......-+|.+.+...-+++.+.|.|....| -..++|..|
T Consensus 82 ~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C 149 (374)
T PRK14293 82 GDMGGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETC 149 (374)
T ss_pred ccccchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCC
Confidence 1123466778887753210000 0000112355555555566666777875543 333444433
No 38
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.73 E-value=8.8e-18 Score=157.66 Aligned_cols=126 Identities=25% Similarity=0.430 Sum_probs=90.9
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCC-CC------
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDD-AD------ 101 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~-~~------ 101 (282)
.|||+||||+++||.++||+|||+||++||||+++ ++.|.++|+.|++||+||+||.+|+.||.+|.... ..
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~ 82 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ 82 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccccc
Confidence 69999999999999999999999999999999985 46799999999999999999999999999874210 00
Q ss_pred cCC---cccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH
Q 023405 102 LAG---DVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL 157 (282)
Q Consensus 102 ~~~---~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i 157 (282)
..+ ....+|.++|..+|+...... ......+|.+.....-+.+-+.+.|+...|
T Consensus 83 ~~~~~~~~~~~~~~~f~~~~g~~~~~~--~~~~~~kg~di~~~v~isLee~~~G~~k~i 139 (306)
T PRK10266 83 HGDGQSFNAEDFDDIFSSIFGQHARQS--RQRPAARGHDIEIEVAVFLEETLTEHKRTI 139 (306)
T ss_pred cCCCCCCCCCCHHHHHHHHhCCCCCCC--CCCCCCCCCceEEEEEEEHHHhcCCceEEE
Confidence 001 112357788888887411000 000122455666665566667777775543
No 39
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=6.6e-18 Score=162.45 Aligned_cols=125 Identities=33% Similarity=0.536 Sum_probs=87.6
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCc-----C
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADL-----A 103 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~-----~ 103 (282)
.|||+||||+++||.++||+|||+||++||||+++ .+.+.++|+.|++||+||+||.+|+.||.+|....... .
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~ 81 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCC
Confidence 69999999999999999999999999999999996 46688999999999999999999999999986421100 0
Q ss_pred C--ccc-----ccHHHHHHHhhccCCHHHHHhh-hhccCCCchhhhHHHHHHHHhcChhhHH
Q 023405 104 G--DVV-----QNLKEFFGAMYKKVTEADIEEF-EANYRGSDSEKKDLIDLYKKYKGNMNRL 157 (282)
Q Consensus 104 ~--~~~-----~~~~~~f~~~f~~~t~~~i~~f-~~~yrgs~ee~~dl~~~y~~~~G~~~~i 157 (282)
+ .++ ..|.+||..+|+.... ... ....+|.+.+...-+++.+.|.|....|
T Consensus 82 g~~~~~~~~~~~~f~~~f~~~~gg~~~---~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i 140 (372)
T PRK14300 82 GNHGGFHPDINDIFGDFFSDFMGGSRR---SRPTSSKVRGSDLKYNLTINLEEAFHGIEKNI 140 (372)
T ss_pred CCCCccccchhhhHHHHHHhhcCCCCC---CCCCcCCCCCCCeeEEEEEEHHHHhCCceEEE
Confidence 0 011 1245566655542100 000 0113566666665556666667776543
No 40
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=8.1e-18 Score=156.85 Aligned_cols=69 Identities=48% Similarity=0.730 Sum_probs=65.1
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCC
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVD 98 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~ 98 (282)
.|||+||||+++||..|||+||++||++||||.+.. ..|.++|++|..||+||+|+.+|..||..|...
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 399999999999999999999999999999999965 489999999999999999999999999998754
No 41
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=2.4e-17 Score=159.19 Aligned_cols=74 Identities=39% Similarity=0.688 Sum_probs=67.5
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHhcCChhHHHhhhccCCCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD---EEAKEKFQQLQKVISILGDEEKRALYDQTGCVD 98 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~---~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~ 98 (282)
...+.+||.+|+|+++||.+||++|||++++.||||++.+. ..|++.|+.|.+||+|||||.+|+.||.+|..+
T Consensus 5 e~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qG 81 (546)
T KOG0718|consen 5 ELDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQG 81 (546)
T ss_pred ccchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcc
Confidence 44567999999999999999999999999999999998533 269999999999999999999999999999864
No 42
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.64 E-value=3e-16 Score=112.14 Aligned_cols=58 Identities=60% Similarity=0.962 Sum_probs=54.4
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHhcCChh
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPG-DEEAKEKFQQLQKVISILGDEE 86 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~-~~~a~~~F~~I~~AY~iLsdp~ 86 (282)
.+||+||||+++++.++|+++|++|++.+|||++++ .+.+.+.|+.|+.||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999999999975 5678999999999999999985
No 43
>PHA03102 Small T antigen; Reviewed
Probab=99.63 E-value=5e-16 Score=132.31 Aligned_cols=84 Identities=24% Similarity=0.382 Sum_probs=71.1
Q ss_pred cccccccCccCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcCCcc
Q 023405 29 KDLYEVLGVERTA--SQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGDV 106 (282)
Q Consensus 29 ~d~Y~vLgv~~~a--s~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~~~~ 106 (282)
..+|+||||+++| |..+||+|||++++++|||++++ .++|+.|+.||++|+|+.+|..||.+|.......
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~---- 76 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE---- 76 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcccccc----
Confidence 4689999999999 99999999999999999999743 3689999999999999999999999997543221
Q ss_pred cccHHHHHHHhhcc
Q 023405 107 VQNLKEFFGAMYKK 120 (282)
Q Consensus 107 ~~~~~~~f~~~f~~ 120 (282)
...+.++|..+|+.
T Consensus 77 ~~~~~~~f~~~fg~ 90 (153)
T PHA03102 77 EDVPSGYVGATFGD 90 (153)
T ss_pred cccHHHHhhhhcCC
Confidence 12388888888864
No 44
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.62 E-value=1e-15 Score=107.33 Aligned_cols=55 Identities=56% Similarity=0.937 Sum_probs=51.9
Q ss_pred ccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCC
Q 023405 30 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGD 84 (282)
Q Consensus 30 d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsd 84 (282)
|||+||||++++|.++|+++|++|++++|||+++..+.+...|+.|+.||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6999999999999999999999999999999996557788999999999999986
No 45
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=8.1e-16 Score=132.69 Aligned_cols=69 Identities=55% Similarity=0.869 Sum_probs=65.5
Q ss_pred CCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchH-HHHHHHHHHHHHHhcCChhHHHhhhcc
Q 023405 26 SNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEE-AKEKFQQLQKVISILGDEEKRALYDQT 94 (282)
Q Consensus 26 ~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~-a~~~F~~I~~AY~iLsdp~~R~~YD~~ 94 (282)
....+||+||||+++|+..+|++|||+++++||||+++.++. +.+.|+.|++||.||+|+..|..||..
T Consensus 3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 356799999999999999999999999999999999988885 999999999999999999999999986
No 46
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.61 E-value=1.2e-15 Score=155.17 Aligned_cols=68 Identities=44% Similarity=0.739 Sum_probs=64.5
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.|||+||||+++|+..+||+|||+|+++||||+++. +.+..+|+.|+.||++|+||.+|..||.+|..
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~a 69 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHD 69 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccc
Confidence 589999999999999999999999999999999965 77889999999999999999999999999864
No 47
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=1.2e-15 Score=135.37 Aligned_cols=73 Identities=38% Similarity=0.664 Sum_probs=67.2
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCC
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDD 99 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~ 99 (282)
..-|+|+||||++++|..|||+|||+|+++||||++|...+..+.|..|++||+.|+|+..|..|..+|..+.
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 4569999999999999999999999999999999997666677889999999999999999999999998654
No 48
>PHA02624 large T antigen; Provisional
Probab=99.57 E-value=5.2e-15 Score=148.77 Aligned_cols=103 Identities=23% Similarity=0.350 Sum_probs=86.0
Q ss_pred ccccccccCccCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhh--hccCCCCCCCcC
Q 023405 28 DKDLYEVLGVERTA--SQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALY--DQTGCVDDADLA 103 (282)
Q Consensus 28 ~~d~Y~vLgv~~~a--s~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~Y--D~~G~~~~~~~~ 103 (282)
..++|+||||+++| +..+||+|||++|++||||+.+ + .++|+.|+.||++|+|+.+|..| |.+ +..+.+
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-d---eekfk~Ln~AYevL~d~~k~~r~~fd~~---~~~~v~ 82 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-D---EEKMKRLNSLYKKLQEGVKSARQSFGTQ---DSSEIP 82 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-c---HHHHHHHHHHHHHHhcHHHhhhcccccc---cccCCC
Confidence 46899999999999 9999999999999999999973 2 46899999999999999999999 443 111223
Q ss_pred CcccccHHHHHHHhhccCCHHHHHhhhhccCCCch
Q 023405 104 GDVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDS 138 (282)
Q Consensus 104 ~~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~e 138 (282)
..+..+|.+||+.+|.++ .+||..|+..|+.+++
T Consensus 83 ~~~~~~w~~ww~~f~~k~-~EDI~c~E~~y~Sd~E 116 (647)
T PHA02624 83 TYGTPEWEQWWEEFNEKW-DEDLFCDEELSSSDDE 116 (647)
T ss_pred CCccccHHHHHHHhhhhh-hccchhhhhccCCCcc
Confidence 346679999999999988 7899999888886544
No 49
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=3.4e-13 Score=123.35 Aligned_cols=176 Identities=23% Similarity=0.297 Sum_probs=127.5
Q ss_pred cCCCCCccccccccCccC---CCCHHHHHHHHHHHHHHhCCCCC--CCchHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 22 NRSSSNDKDLYEVLGVER---TASQQEIKKAYYKLALRLHPDKN--PGDEEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 22 ~~~~~~~~d~Y~vLgv~~---~as~~eIKkAYrklal~~HPDk~--~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
.+..++..|+|.+|||+. .+++.+|.++.++.+.+||||+. .++......|..|+.||+||+|+.+|..||....
T Consensus 36 d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df 115 (379)
T COG5269 36 DFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDF 115 (379)
T ss_pred hhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence 467788999999999996 58999999999999999999997 3344677889999999999999999999998654
Q ss_pred CCCCCcC-CcccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhc-ChhhHHHhhhcccCcc-------
Q 023405 97 VDDADLA-GDVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYK-GNMNRLFCSMLCSDQK------- 167 (282)
Q Consensus 97 ~~~~~~~-~~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~-G~~~~i~~~v~~s~~~------- 167 (282)
..+...+ ......|++.|..+|.....-.+.........++.-+..|..||+.|. -+..+.|+.|--.-|+
T Consensus 116 ~advppp~~~t~~~Ffe~w~pvFe~earFSkKqPvPsLg~~dss~keVe~FY~FW~nFdSWRtFE~lded~pdd~e~rD~ 195 (379)
T COG5269 116 DADVPPPRIYTPDEFFEVWEPVFEREARFSKKQPVPSLGPSDSSLKEVEEFYEFWSNFDSWRTFEPLDEDYPDDMEERDR 195 (379)
T ss_pred ccCCCCccCCCchhHHHHHHHHHHhhhhccccCCCCCCCCchhHHHHHHHHHHHHHhccccccccchhhhcCcchhhhhh
Confidence 3221111 123457888899999876666667777888888888889999999752 2334555554332221
Q ss_pred -----------------CChHHHHHHHHHHHHc-CCCcchhhhHHHHh
Q 023405 168 -----------------LDSHRFKDILDETIAA-GELKATKAYQKWAK 197 (282)
Q Consensus 168 -----------------~de~R~~~ii~~~I~~-g~~~~~~~~~~~~~ 197 (282)
.|.-|++.+++.+.+. -.|+.++.-.+..+
T Consensus 196 kry~e~KNr~~r~k~K~~DnaRl~~LV~~A~~~DPRIK~fkEqeK~~k 243 (379)
T COG5269 196 KRYSEAKNREKRAKLKNQDNARLKRLVQIAKKRDPRIKSFKEQEKEMK 243 (379)
T ss_pred HHHHHhhhHHHHHhhhchhHHHHHHHHHHHHhcCcchhhHHHHHHHHH
Confidence 3456777777777665 33444444333333
No 50
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=1.6e-14 Score=130.93 Aligned_cols=86 Identities=38% Similarity=0.599 Sum_probs=72.1
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcCCcc
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGDV 106 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~~~~ 106 (282)
+..|+|+||||+++++..+|.+|||+||++||||++++ +++.+.|..|..||++|.|...|..||-.-.. +..-
T Consensus 31 G~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyaldh-----pd~~ 104 (329)
T KOG0722|consen 31 GAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYALDH-----PDEV 104 (329)
T ss_pred cchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHhcC-----chHH
Confidence 56899999999999999999999999999999999964 56779999999999999999999999976432 2233
Q ss_pred cccHHHHHHHhh
Q 023405 107 VQNLKEFFGAMY 118 (282)
Q Consensus 107 ~~~~~~~f~~~f 118 (282)
+.+.+.|++.-.
T Consensus 105 fynyyqyyr~r~ 116 (329)
T KOG0722|consen 105 FYNYYQYYRARY 116 (329)
T ss_pred HHHHHHHHHHHh
Confidence 456666666544
No 51
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=7.5e-14 Score=121.16 Aligned_cols=66 Identities=23% Similarity=0.329 Sum_probs=58.7
Q ss_pred cccccccCccCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHhcCChhHHHhhhcc
Q 023405 29 KDLYEVLGVERT--ASQQEIKKAYYKLALRLHPDKNPGDE-----EAKEKFQQLQKVISILGDEEKRALYDQT 94 (282)
Q Consensus 29 ~d~Y~vLgv~~~--as~~eIKkAYrklal~~HPDk~~~~~-----~a~~~F~~I~~AY~iLsdp~~R~~YD~~ 94 (282)
.|||+||||++. ++..+|+++||+|++++|||+.+..+ .|...|..|+.||.||+||.+|+.|+-.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~ 73 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS 73 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence 489999999996 68899999999999999999986543 2677899999999999999999999853
No 52
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=1.1e-13 Score=119.70 Aligned_cols=66 Identities=24% Similarity=0.411 Sum_probs=58.1
Q ss_pred cccccccCccCC--CCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHhcCChhHHHhhhcc
Q 023405 29 KDLYEVLGVERT--ASQQEIKKAYYKLALRLHPDKNPGDE---EAKEKFQQLQKVISILGDEEKRALYDQT 94 (282)
Q Consensus 29 ~d~Y~vLgv~~~--as~~eIKkAYrklal~~HPDk~~~~~---~a~~~F~~I~~AY~iLsdp~~R~~YD~~ 94 (282)
.|||+||||++. ++..+|+++|++|+++||||+++... .+...|..|++||.||+||.+|+.|+-.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~ 72 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLL 72 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 589999999997 78999999999999999999986433 2445688999999999999999999764
No 53
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=6.5e-14 Score=134.43 Aligned_cols=106 Identities=38% Similarity=0.567 Sum_probs=87.2
Q ss_pred chhHHhhhhhccCCCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhcCChhHHH
Q 023405 11 HEEEELNQENLNRSSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRA 89 (282)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~-~~a~~~F~~I~~AY~iLsdp~~R~ 89 (282)
.+...+..+.+-...++..+||.||||.++++..+|++|||+++|.||||++.++ .++..+|..|..||.||+||.+|.
T Consensus 355 e~r~~l~~A~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~ 434 (486)
T KOG0550|consen 355 EIRRTLREAQLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRV 434 (486)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHh
Confidence 3456667777777888899999999999999999999999999999999999887 689999999999999999999999
Q ss_pred hhhccCCCCCCCcCCcccccHHHHHHHh
Q 023405 90 LYDQTGCVDDADLAGDVVQNLKEFFGAM 117 (282)
Q Consensus 90 ~YD~~G~~~~~~~~~~~~~~~~~~f~~~ 117 (282)
.||..-...+.+..+ +..++...|+.+
T Consensus 435 r~dsg~dle~~~~~~-a~~dp~~~~~a~ 461 (486)
T KOG0550|consen 435 RFDSGQDLEEVGSGG-AGFDPFNIFRAF 461 (486)
T ss_pred hcccccchhhhcCCC-cCcChhhhhhhc
Confidence 999865554443333 334555555544
No 54
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.44 E-value=2.3e-13 Score=118.31 Aligned_cols=68 Identities=19% Similarity=0.295 Sum_probs=61.0
Q ss_pred CccccccccCccCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHhcCChhHHHhhhcc
Q 023405 27 NDKDLYEVLGVERT--ASQQEIKKAYYKLALRLHPDKNPGDE-----EAKEKFQQLQKVISILGDEEKRALYDQT 94 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~--as~~eIKkAYrklal~~HPDk~~~~~-----~a~~~F~~I~~AY~iLsdp~~R~~YD~~ 94 (282)
+..+||++|||++. .+..+|+++||+|+++||||+++..+ .+...|..|+.||.||+||.+|+.|+-.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~ 76 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLA 76 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 56899999999997 67899999999999999999986654 2677899999999999999999999963
No 55
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.43 E-value=2.8e-13 Score=118.12 Aligned_cols=66 Identities=21% Similarity=0.350 Sum_probs=58.5
Q ss_pred ccccccccCccCC--CCHHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHhcCChhHHHhhhc
Q 023405 28 DKDLYEVLGVERT--ASQQEIKKAYYKLALRLHPDKNPGDEE-----AKEKFQQLQKVISILGDEEKRALYDQ 93 (282)
Q Consensus 28 ~~d~Y~vLgv~~~--as~~eIKkAYrklal~~HPDk~~~~~~-----a~~~F~~I~~AY~iLsdp~~R~~YD~ 93 (282)
..|||+||||++. ++..+|+++|++|+++||||+++..+. +...+..|+.||.+|+||.+|+.|+-
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 4799999999995 689999999999999999999876553 44556899999999999999999995
No 56
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.42 E-value=1.2e-13 Score=130.52 Aligned_cols=84 Identities=39% Similarity=0.610 Sum_probs=71.4
Q ss_pred hHHhhhhhccCCCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHhcCChhHHH
Q 023405 13 EEELNQENLNRSSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDE---EAKEKFQQLQKVISILGDEEKRA 89 (282)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~---~a~~~F~~I~~AY~iLsdp~~R~ 89 (282)
.+.+.++.-....+..+|||+||||.++|+..||-+|||+||++||||-..+.+ .|..+|--|..|-+||+||++|.
T Consensus 378 reGle~Akrlkkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRr 457 (504)
T KOG0624|consen 378 REGLERAKRLKKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRR 457 (504)
T ss_pred HHHHHHHHHHHHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHh
Confidence 344444444445567899999999999999999999999999999999986654 58999999999999999999999
Q ss_pred hhhccCC
Q 023405 90 LYDQTGC 96 (282)
Q Consensus 90 ~YD~~G~ 96 (282)
.+|..-.
T Consensus 458 qFDnGeD 464 (504)
T KOG0624|consen 458 QFDNGED 464 (504)
T ss_pred hccCCCC
Confidence 9997543
No 57
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=9.3e-13 Score=127.53 Aligned_cols=68 Identities=40% Similarity=0.573 Sum_probs=64.6
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccC
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 95 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G 95 (282)
+..|+|.||||+++++.++||+.||++|..+|||||- .+.|.+.|+.|+.||++|+|+.+|..||..-
T Consensus 233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~ 300 (490)
T KOG0720|consen 233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL 300 (490)
T ss_pred cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 3789999999999999999999999999999999996 7889999999999999999999999999853
No 58
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.1e-12 Score=118.51 Aligned_cols=69 Identities=51% Similarity=0.872 Sum_probs=63.3
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~-~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
..+||.||||.+.|+..+|++||++++++||||+++.. ..|..+|.+|.+||++|+||.+|..||.+|.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 46899999999999999999999999999999998765 2455589999999999999999999999997
No 59
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.21 E-value=1.5e-11 Score=113.76 Aligned_cols=59 Identities=42% Similarity=0.553 Sum_probs=52.4
Q ss_pred CCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCC--c-----hHHHHHHHHHHHHHHhcCC
Q 023405 26 SNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPG--D-----EEAKEKFQQLQKVISILGD 84 (282)
Q Consensus 26 ~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~--~-----~~a~~~F~~I~~AY~iLsd 84 (282)
....++|+||||++++|.++||+|||+|+++||||++.. . +.|+++|+.|+.||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 345799999999999999999999999999999999742 1 3589999999999999985
No 60
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.16 E-value=3.5e-11 Score=98.14 Aligned_cols=52 Identities=29% Similarity=0.476 Sum_probs=47.0
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILG 83 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLs 83 (282)
..++|+||||++++|.++|+++||+|++++|||+. ++ ...|+.|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg-Gs---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNG-GS---TYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC-CC---HHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999986 32 357899999999985
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.09 E-value=1.2e-10 Score=112.89 Aligned_cols=73 Identities=36% Similarity=0.666 Sum_probs=66.4
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCC-----chHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPG-----DEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA 100 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~-----~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~ 100 (282)
.-|+|+|||++.+++..+||++||+|+.++||||.+. .++-.+.+..|.+||..|+|...|..|=.+|..+.+
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 4689999999999999999999999999999999875 236788999999999999999999999999987543
No 62
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.07 E-value=3e-10 Score=98.88 Aligned_cols=65 Identities=20% Similarity=0.260 Sum_probs=57.9
Q ss_pred cccccccCccCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHhcCChhHHHhhhc
Q 023405 29 KDLYEVLGVERT--ASQQEIKKAYYKLALRLHPDKNPGDE-----EAKEKFQQLQKVISILGDEEKRALYDQ 93 (282)
Q Consensus 29 ~d~Y~vLgv~~~--as~~eIKkAYrklal~~HPDk~~~~~-----~a~~~F~~I~~AY~iLsdp~~R~~YD~ 93 (282)
.|||++|||++. .+...|++.|+.|..++|||+....+ .|...-..||.||.+|+||.+|+.|=-
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 589999999997 89999999999999999999986543 356678899999999999999999965
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=4.9e-10 Score=98.76 Aligned_cols=66 Identities=33% Similarity=0.587 Sum_probs=60.6
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhcCChhHHHhhh
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYD 92 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~-~~a~~~F~~I~~AY~iLsdp~~R~~YD 92 (282)
-+.|+|+||.|.|..+.++||+.||+|++.+|||+||++ +-|...|..|..||.+|-|+..|..-+
T Consensus 51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 467999999999999999999999999999999999988 579999999999999999998776544
No 64
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.93 E-value=1.8e-09 Score=92.61 Aligned_cols=54 Identities=26% Similarity=0.307 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHhcCChhHHHhhhcc
Q 023405 41 ASQQEIKKAYYKLALRLHPDKNPGDE-----EAKEKFQQLQKVISILGDEEKRALYDQT 94 (282)
Q Consensus 41 as~~eIKkAYrklal~~HPDk~~~~~-----~a~~~F~~I~~AY~iLsdp~~R~~YD~~ 94 (282)
.+..+|+++|++|+++||||+++... .+...|..|+.||.+|+||.+|+.|+-.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~ 61 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS 61 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 57789999999999999999975432 3778999999999999999999999985
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.02 E-value=6.3e-06 Score=87.16 Aligned_cols=55 Identities=36% Similarity=0.632 Sum_probs=46.7
Q ss_pred CCccccccccCccCC----CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcC
Q 023405 26 SNDKDLYEVLGVERT----ASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILG 83 (282)
Q Consensus 26 ~~~~d~Y~vLgv~~~----as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLs 83 (282)
-...+-|+||.|+-+ -.++.||++|++||.+|||||||. ..++|..|++||+.|+
T Consensus 1278 mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE---GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1278 MSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE---GREMFERVNKAYELLS 1336 (2235)
T ss_pred cchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch---HHHHHHHHHHHHHHHH
Confidence 344567999999853 355889999999999999999964 6789999999999998
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=9e-06 Score=73.65 Aligned_cols=56 Identities=29% Similarity=0.569 Sum_probs=49.5
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHH-hcCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVIS-ILGD 84 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~-iLsd 84 (282)
-..||.||||..+|+.++++.||..|+.++|||...+ ......|++|.+||. ||+.
T Consensus 46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999843 445578999999999 8864
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.21 E-value=0.00059 Score=54.87 Aligned_cols=50 Identities=22% Similarity=0.335 Sum_probs=41.9
Q ss_pred cccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCC
Q 023405 31 LYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGD 84 (282)
Q Consensus 31 ~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsd 84 (282)
--.||||+++++.+.||.|+|++-+..|||+-. .| -.-..|++|+++|..
T Consensus 58 A~lIL~v~~s~~k~KikeaHrriM~~NHPD~GG-SP---YlAsKINEAKdlLe~ 107 (112)
T KOG0723|consen 58 AALILGVTPSLDKDKIKEAHRRIMLANHPDRGG-SP---YLASKINEAKDLLEG 107 (112)
T ss_pred HHHHhCCCccccHHHHHHHHHHHHHcCCCcCCC-CH---HHHHHHHHHHHHHhc
Confidence 346999999999999999999999999999984 44 122459999999875
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.82 E-value=0.0018 Score=55.55 Aligned_cols=68 Identities=25% Similarity=0.449 Sum_probs=55.6
Q ss_pred CCccccccccCccC--CCCHHHHHHHHHHHHHHhCCCCCCC-----chHHHHHHHHHHHHHHhcCChhHHHhhhc
Q 023405 26 SNDKDLYEVLGVER--TASQQEIKKAYYKLALRLHPDKNPG-----DEEAKEKFQQLQKVISILGDEEKRALYDQ 93 (282)
Q Consensus 26 ~~~~d~Y~vLgv~~--~as~~eIKkAYrklal~~HPDk~~~-----~~~a~~~F~~I~~AY~iLsdp~~R~~YD~ 93 (282)
+...+||.++|... ...+.-+.--|.-.+.+.|||+... ...|.+....|++||.+|.||-+|+.|=.
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil 79 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL 79 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 45678999998665 4577777778999999999999521 12588889999999999999999999964
No 69
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.36 E-value=0.004 Score=61.96 Aligned_cols=59 Identities=27% Similarity=0.430 Sum_probs=41.5
Q ss_pred cCCCCCccccccccC----------------ccCCCCHHHHHHHHHHHHHHhCCCCCCCch---H----HHHHHHHHHHH
Q 023405 22 NRSSSNDKDLYEVLG----------------VERTASQQEIKKAYYKLALRLHPDKNPGDE---E----AKEKFQQLQKV 78 (282)
Q Consensus 22 ~~~~~~~~d~Y~vLg----------------v~~~as~~eIKkAYrklal~~HPDk~~~~~---~----a~~~F~~I~~A 78 (282)
.+..++..|.-.+|+ |..-.+++.||++|||..|.+||||.+..+ . |.+.|-.+++|
T Consensus 365 ~W~~GKE~NIRALLSTLh~VLW~es~WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~ea 444 (453)
T KOG0431|consen 365 RWSEGKEGNIRALLSTLHYVLWPESGWQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEA 444 (453)
T ss_pred HhcccccccHHHHHHHHhHhhcCccCcccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHH
Confidence 356666666655554 333479999999999999999999987653 2 55555566666
Q ss_pred HH
Q 023405 79 IS 80 (282)
Q Consensus 79 Y~ 80 (282)
+.
T Consensus 445 wn 446 (453)
T KOG0431|consen 445 WN 446 (453)
T ss_pred HH
Confidence 54
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.95 E-value=0.0046 Score=53.71 Aligned_cols=54 Identities=44% Similarity=0.578 Sum_probs=47.4
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCC--ch-----HHHHHHHHHHHHHHhc
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPG--DE-----EAKEKFQQLQKVISIL 82 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~--~~-----~a~~~F~~I~~AY~iL 82 (282)
.+.|.+||+...++..+|+++|+++.-.+|||+... .+ .+.++++.|+.||..+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999999999632 11 5888999999999754
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.50 E-value=0.011 Score=51.46 Aligned_cols=65 Identities=23% Similarity=0.302 Sum_probs=52.0
Q ss_pred ccccccCccCCC--CHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHhcCChhHHHhhhcc
Q 023405 30 DLYEVLGVERTA--SQQEIKKAYYKLALRLHPDKNPGDE-----EAKEKFQQLQKVISILGDEEKRALYDQT 94 (282)
Q Consensus 30 d~Y~vLgv~~~a--s~~eIKkAYrklal~~HPDk~~~~~-----~a~~~F~~I~~AY~iLsdp~~R~~YD~~ 94 (282)
+++..+|+++.+ ..+.+...|+.+.+.+|||+....+ .+...+..++.||.+|.||-.|+.|=..
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~la 73 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLA 73 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 355566666654 4566899999999999999986543 2556899999999999999999999764
No 72
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=91.41 E-value=0.097 Score=49.63 Aligned_cols=58 Identities=33% Similarity=0.498 Sum_probs=46.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC----chHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 40 TASQQEIKKAYYKLALRLHPDKNPG----DEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 40 ~as~~eIKkAYrklal~~HPDk~~~----~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.++...|..+|+..++.+||++... .....+.|+.|.+||.||++...|...|..-.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~~~ 64 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWDKF 64 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhhHH
Confidence 3577889999999999999999842 124556799999999999997777777776533
No 73
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=86.84 E-value=1.4 Score=36.74 Aligned_cols=52 Identities=23% Similarity=0.250 Sum_probs=35.1
Q ss_pred ccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCCh
Q 023405 30 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDE 85 (282)
Q Consensus 30 d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp 85 (282)
.-..||||++..+.++|.+.|.+|-...+|++... . -.=..|..|.+.|...
T Consensus 59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-f---YLQSKV~rAKErl~~E 110 (127)
T PF03656_consen 59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGGS-F---YLQSKVFRAKERLEQE 110 (127)
T ss_dssp HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS--H---HHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-H---HHHHHHHHHHHHHHHH
Confidence 44689999999999999999999999999998742 1 1123577777776543
No 74
>PF13446 RPT: A repeated domain in UCH-protein
Probab=74.41 E-value=6.8 Score=27.91 Aligned_cols=27 Identities=22% Similarity=0.444 Sum_probs=24.0
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHH
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLAL 55 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal 55 (282)
..-|.+|||+++.+.+.|-.+|.....
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999998776
No 75
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=73.76 E-value=7.3 Score=31.66 Aligned_cols=47 Identities=21% Similarity=0.335 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCchH----HHHHHHHHHHHHHhcCCh
Q 023405 39 RTASQQEIKKAYYKLALRLHPDKNPGDEE----AKEKFQQLQKVISILGDE 85 (282)
Q Consensus 39 ~~as~~eIKkAYrklal~~HPDk~~~~~~----a~~~F~~I~~AY~iLsdp 85 (282)
...+..+++.|.|.+-+++|||.....|. ..+-++.|+.-.+.|..+
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 34567789999999999999998766553 344577777777777654
No 76
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=63.87 E-value=13 Score=23.14 Aligned_cols=26 Identities=23% Similarity=0.441 Sum_probs=19.9
Q ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHHHh
Q 023405 242 FSSLVSKYGGAAAGSEPTDEEFEAAQKKIE 271 (282)
Q Consensus 242 ~~~Le~Ky~~~~~~~ep~~e~F~~~~~~~~ 271 (282)
+..|..-|... .+++|||++..++|.
T Consensus 5 L~~L~~l~~~G----~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 5 LEKLKELYDKG----EISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHHcC----CCCHHHHHHHHHHHh
Confidence 45566666654 799999999998875
No 77
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=58.31 E-value=15 Score=32.74 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=28.5
Q ss_pred cCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhc
Q 023405 38 ERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISIL 82 (282)
Q Consensus 38 ~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iL 82 (282)
+++||.+||..|+.++..+|--| +. .-..|-.||+.|
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd-----~~---~~~~IEaAYD~I 37 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD-----EK---SREAIEAAYDAI 37 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC-----HH---HHHHHHHHHHHH
Confidence 57899999999999999999333 32 345588899854
No 78
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=48.14 E-value=59 Score=24.81 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=30.3
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPG 64 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~ 64 (282)
++|.-+++|++|-||+.||+.|-++.++++.--..|.
T Consensus 2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS 38 (88)
T COG5552 2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPS 38 (88)
T ss_pred ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcc
Confidence 4667788999999999999999988888876655543
No 79
>PF10384 Scm3: Centromere protein Scm3; InterPro: IPR018465 The centromere protein Scm3 is a non-histone component of centromeric chromatin that binds to CenH3-H4 histones, which are required for kinetochore assembly. Scm3 is required for Cse4 localisation and is required for its centromeric association [, ]. The histone H3 variant Cse4 replaces conventional histone H3 in centromeric chromatin and helps direct the assembly of the kinetochore. In addition, Scm3 has been shown in Saccharomyces cerevisiae (Baker's yeast) to be required for G2/M progression []. Scm3 is required to maintain kinetochore function throughout the cell cycle. Scm3 contains a nuclear export signal (NES). The N-terminal region of Scm3 is well conserved and functions as the CenH3-interacting domain, while the C-terminal region is variable in size and sometimes consists of DNA binding motifs [].; GO: 0005634 nucleus; PDB: 3R45_C 2YFV_C 2L5A_A.
Probab=37.04 E-value=45 Score=24.02 Aligned_cols=18 Identities=39% Similarity=0.798 Sum_probs=15.8
Q ss_pred HHhHHHHHHHHHHHhCCC
Q 023405 235 KDRFDSMFSSLVSKYGGA 252 (282)
Q Consensus 235 ~~~~~~~~~~Le~Ky~~~ 252 (282)
..+|.+.+++|-+||+.+
T Consensus 11 ~~r~k~~~e~I~~KY~~~ 28 (58)
T PF10384_consen 11 DQRFKSRWESIIEKYGQP 28 (58)
T ss_dssp HHHHHHHHHHHHHHHCSG
T ss_pred HHHHHHHHHHHHHHhcCc
Confidence 468899999999999985
No 80
>COG3462 Predicted membrane protein [Function unknown]
Probab=29.05 E-value=67 Score=26.23 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=18.6
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHHHh
Q 023405 243 SSLVSKYGGAAAGSEPTDEEFEAAQKKIE 271 (282)
Q Consensus 243 ~~Le~Ky~~~~~~~ep~~e~F~~~~~~~~ 271 (282)
+-|-++|++. |+|||||.++...+.
T Consensus 92 eIlkER~AkG----EItEEEY~r~~~~ir 116 (117)
T COG3462 92 EILKERYAKG----EITEEEYRRIIRTIR 116 (117)
T ss_pred HHHHHHHhcC----CCCHHHHHHHHHHhc
Confidence 3445567765 899999999987764
No 81
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=23.56 E-value=87 Score=19.27 Aligned_cols=17 Identities=18% Similarity=0.329 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHhCC
Q 023405 43 QQEIKKAYYKLALRLHP 59 (282)
Q Consensus 43 ~~eIKkAYrklal~~HP 59 (282)
.++.+.+.|+.||.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 47789999999999993
No 82
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=23.24 E-value=2.2e+02 Score=19.19 Aligned_cols=42 Identities=17% Similarity=0.142 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhc
Q 023405 47 KKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 93 (282)
Q Consensus 47 KkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~ 93 (282)
...++...+.-||+.. ..+....|...|..|++.++...++.
T Consensus 12 ~~~~~~~~~~~~~~~~-----~~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 12 SQEHRAEVKAENPGLS-----VGEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHHCcCCC-----HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4566777788889854 45677889999999998665555543
No 83
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=22.64 E-value=69 Score=16.28 Aligned_cols=13 Identities=23% Similarity=0.503 Sum_probs=9.4
Q ss_pred HHHHHHHHHHhcC
Q 023405 71 KFQQLQKVISILG 83 (282)
Q Consensus 71 ~F~~I~~AY~iLs 83 (282)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4677888887764
No 84
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=20.35 E-value=4e+02 Score=20.38 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=30.6
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPG 64 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~ 64 (282)
|+|.-.+.|+.|-+|.+||..|-.+.+++..--..|.
T Consensus 2 CRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps 38 (78)
T PF10041_consen 2 CRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPS 38 (78)
T ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcc
Confidence 4555667799999999999999999999987776654
No 85
>PF05120 GvpG: Gas vesicle protein G ; InterPro: IPR007804 Gas vesicles are intracellular, protein-coated, and hollow organelles found in cyanobacteria and halophilic archaea. They are permeable to ambient gases by diffusion and provide buoyancy, enabling cells to move upwards in water to access oxygen and/or light. Proteins containing this family are involved in the formation of gas vesicles [].
Probab=20.00 E-value=2.3e+02 Score=21.68 Aligned_cols=29 Identities=24% Similarity=0.414 Sum_probs=20.7
Q ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhhc
Q 023405 241 MFSSLVSKYGGAAAGSEPTDEEFEAAQKKIENR 273 (282)
Q Consensus 241 ~~~~Le~Ky~~~~~~~ep~~e~F~~~~~~~~~~ 273 (282)
-+..|+..|... ++++|+|.+....|..+
T Consensus 36 ~L~~L~~~~e~G----EIseeEf~~~E~eLL~r 64 (79)
T PF05120_consen 36 ELAELQEALEAG----EISEEEFERREDELLDR 64 (79)
T ss_pred HHHHHHHHHHcC----CCCHHHHHHHHHHHHHH
Confidence 345555555543 89999999998887654
Done!