Query 023405
Match_columns 282
No_of_seqs 297 out of 2346
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 06:14:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023405.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023405hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ctw_A DNAJ homolog subfamily 99.9 4.1E-22 1.4E-26 159.4 6.4 91 25-115 13-103 (109)
2 2dn9_A DNAJ homolog subfamily 99.9 1E-21 3.4E-26 147.8 7.8 73 25-97 3-75 (79)
3 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 5.1E-22 1.7E-26 158.5 5.3 93 22-119 8-104 (109)
4 1bq0_A DNAJ, HSP40; chaperone, 99.8 9.8E-22 3.3E-26 155.4 5.6 71 28-98 2-72 (103)
5 2ctp_A DNAJ homolog subfamily 99.8 7.5E-21 2.5E-25 142.8 8.0 72 25-97 3-74 (78)
6 2ej7_A HCG3 gene; HCG3 protein 99.8 9.3E-21 3.2E-25 143.5 8.5 73 25-97 5-78 (82)
7 2och_A Hypothetical protein DN 99.8 1.5E-20 5.1E-25 139.6 7.5 68 26-96 5-72 (73)
8 2ctq_A DNAJ homolog subfamily 99.8 7E-21 2.4E-25 152.8 6.0 77 21-97 12-88 (112)
9 2yua_A Williams-beuren syndrom 99.8 1.1E-20 3.9E-25 148.4 6.9 72 25-96 13-84 (99)
10 1hdj_A Human HSP40, HDJ-1; mol 99.8 1.6E-20 5.4E-25 140.7 7.1 69 28-97 2-70 (77)
11 2ctr_A DNAJ homolog subfamily 99.8 1.7E-20 5.9E-25 144.3 7.4 71 25-96 3-73 (88)
12 2dmx_A DNAJ homolog subfamily 99.8 1.7E-20 5.8E-25 145.2 7.2 74 25-98 5-79 (92)
13 2cug_A Mkiaa0962 protein; DNAJ 99.8 3E-20 1E-24 142.9 7.5 72 25-97 13-84 (88)
14 3apq_A DNAJ homolog subfamily 99.8 3E-20 1E-24 161.4 8.1 90 29-119 2-91 (210)
15 1wjz_A 1700030A21RIK protein; 99.8 2.4E-20 8.2E-25 144.6 6.4 74 24-97 11-90 (94)
16 3bvo_A CO-chaperone protein HS 99.8 3.5E-19 1.2E-23 157.5 11.8 147 25-183 39-202 (207)
17 2lgw_A DNAJ homolog subfamily 99.8 9.6E-20 3.3E-24 143.4 6.1 69 29-97 2-71 (99)
18 2o37_A Protein SIS1; HSP40, J- 99.8 2E-19 7E-24 139.4 7.1 67 27-96 6-72 (92)
19 1gh6_A Large T antigen; tumor 99.7 1.6E-19 5.5E-24 145.8 1.9 84 28-115 7-93 (114)
20 3lz8_A Putative chaperone DNAJ 99.7 2E-20 6.9E-25 175.9 -4.3 128 27-157 26-162 (329)
21 2l6l_A DNAJ homolog subfamily 99.7 2.7E-18 9.3E-23 144.7 6.5 72 24-95 5-82 (155)
22 2ys8_A RAB-related GTP-binding 99.7 4E-18 1.4E-22 131.7 4.0 63 27-90 25-87 (90)
23 3hho_A CO-chaperone protein HS 99.7 8E-18 2.7E-22 145.0 5.9 69 27-95 2-77 (174)
24 1fpo_A HSC20, chaperone protei 99.7 6.1E-17 2.1E-21 139.1 7.7 67 30-96 2-75 (171)
25 1iur_A KIAA0730 protein; DNAJ 99.7 1.1E-17 3.9E-22 129.1 2.5 67 22-88 9-76 (88)
26 3apo_A DNAJ homolog subfamily 99.7 5.5E-18 1.9E-22 173.1 -1.2 75 24-98 16-90 (780)
27 2pf4_E Small T antigen; PP2A, 99.7 8.7E-18 3E-22 144.8 0.1 66 27-96 9-76 (174)
28 1faf_A Large T antigen; J doma 99.6 8.3E-17 2.8E-21 121.6 4.3 64 28-96 10-75 (79)
29 1n4c_A Auxilin; four helix bun 99.6 4.9E-17 1.7E-21 141.0 2.9 67 25-91 113-182 (182)
30 2qwo_B Putative tyrosine-prote 99.6 9.2E-17 3.1E-21 125.0 2.9 56 29-84 33-91 (92)
31 3ag7_A Putative uncharacterize 99.6 2.8E-16 9.6E-21 125.2 4.5 66 20-86 32-104 (106)
32 3uo3_A J-type CO-chaperone JAC 99.6 2.9E-16 9.9E-21 136.1 3.3 68 24-94 6-80 (181)
33 2guz_A Mitochondrial import in 99.5 2.2E-15 7.4E-20 111.5 2.1 57 28-88 13-70 (71)
34 2y4t_A DNAJ homolog subfamily 99.0 1.9E-10 6.5E-15 105.9 4.9 66 28-93 381-449 (450)
35 2guz_B Mitochondrial import in 98.5 7.6E-08 2.6E-12 69.9 4.1 51 30-84 5-58 (65)
36 2pzi_A Probable serine/threoni 87.5 0.3 1E-05 48.7 3.2 53 21-81 621-675 (681)
37 2dhy_A CUE domain-containing p 26.3 92 0.0031 21.9 4.4 42 105-163 16-57 (67)
38 1wgl_A TOLL-interacting protei 25.7 67 0.0023 22.0 3.5 40 109-165 11-50 (59)
39 4a3n_A Transcription factor SO 21.6 1.5E+02 0.0052 19.8 4.8 41 47-92 14-54 (71)
40 1zl8_A LIN-7; heterodimer, alp 21.6 40 0.0014 22.8 1.6 23 169-191 8-30 (53)
41 2cqn_A Formin-binding protein 21.6 1.6E+02 0.0055 21.0 5.0 52 42-94 7-61 (77)
No 1
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=4.1e-22 Score=159.37 Aligned_cols=91 Identities=38% Similarity=0.659 Sum_probs=76.3
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAG 104 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~~ 104 (282)
.....+||+||||+++|+.++||+|||+|+++||||+++..+.+.+.|+.|+.||+||+||.+|..||.+|.........
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~~~~~ 92 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQ 92 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccccccc
Confidence 34568999999999999999999999999999999999888889999999999999999999999999998642211111
Q ss_pred cccccHHHHHH
Q 023405 105 DVVQNLKEFFG 115 (282)
Q Consensus 105 ~~~~~~~~~f~ 115 (282)
.+..+|..||.
T Consensus 93 ~~~~~~~~~~~ 103 (109)
T 2ctw_A 93 FGEENVNTYFV 103 (109)
T ss_dssp TCTTHHHHHHH
T ss_pred cCCcchHHHhh
Confidence 22357777774
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=147.84 Aligned_cols=73 Identities=53% Similarity=0.803 Sum_probs=68.8
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.....+||+||||+++|+.++||+|||+|+++||||+++..+.+.+.|+.|+.||+||+||.+|..||.+|..
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 4567899999999999999999999999999999999987788999999999999999999999999999864
No 3
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.85 E-value=5.1e-22 Score=158.49 Aligned_cols=93 Identities=25% Similarity=0.336 Sum_probs=79.6
Q ss_pred cCCCCCccccccccCccCCC-CHHHHHHHHHHHHHHhCCCCCCC---chHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 22 NRSSSNDKDLYEVLGVERTA-SQQEIKKAYYKLALRLHPDKNPG---DEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 22 ~~~~~~~~d~Y~vLgv~~~a-s~~eIKkAYrklal~~HPDk~~~---~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
........+||+||||+++| |.++||+|||+|+++||||++++ .+.+.+.|+.|++||+||+||.+|..||..|..
T Consensus 8 ~~~~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 8 PELYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTSTTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HHHHcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 34445678999999999999 99999999999999999999975 357899999999999999999999999998853
Q ss_pred CCCCcCCcccccHHHHHHHhhc
Q 023405 98 DDADLAGDVVQNLKEFFGAMYK 119 (282)
Q Consensus 98 ~~~~~~~~~~~~~~~~f~~~f~ 119 (282)
. ++.+.+|..||+.+|+
T Consensus 88 ~-----~~~~~~~~~~~~~~~~ 104 (109)
T 2qsa_A 88 P-----DQRFYNYYQYYRLRAA 104 (109)
T ss_dssp T-----TCHHHHHHHHHHHC--
T ss_pred c-----hHHHHHHHHHHHHHhc
Confidence 2 2346789999999884
No 4
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.84 E-value=9.8e-22 Score=155.44 Aligned_cols=71 Identities=48% Similarity=0.871 Sum_probs=66.9
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVD 98 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~ 98 (282)
..+||+||||+++||.++||+|||+|+++||||+++..+.+.+.|+.|++||+||+||.+|..||.+|...
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 36899999999999999999999999999999999877788999999999999999999999999999753
No 5
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=7.5e-21 Score=142.85 Aligned_cols=72 Identities=46% Similarity=0.738 Sum_probs=67.0
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.....+||+||||+++|+.++|++||++|+++||||+++ .+.+.+.|+.|+.||+||+||.+|..||.+|..
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 456789999999999999999999999999999999995 477899999999999999999999999999864
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=9.3e-21 Score=143.51 Aligned_cols=73 Identities=51% Similarity=0.780 Sum_probs=67.3
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDE-EAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~-~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.....+||+||||+++++.++||+||++|+++||||+++... .+.+.|+.|+.||+||+||.+|..||.+|..
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 445689999999999999999999999999999999997654 6889999999999999999999999999864
No 7
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.82 E-value=1.5e-20 Score=139.58 Aligned_cols=68 Identities=49% Similarity=0.851 Sum_probs=62.3
Q ss_pred CCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 26 SNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 26 ~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
....+||+||||+++||.++|++||++|+++||||++++. .+.|+.|+.||+||+||.+|..||.+|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 3568999999999999999999999999999999999754 4789999999999999999999999985
No 8
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=7e-21 Score=152.84 Aligned_cols=77 Identities=40% Similarity=0.575 Sum_probs=70.8
Q ss_pred ccCCCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 21 LNRSSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 21 ~~~~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
+........|||+||||+++|+.++||+|||+|+++||||++++++.+.+.|+.|+.||+||+||.+|..||.+|..
T Consensus 12 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 88 (112)
T 2ctq_A 12 LNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS 88 (112)
T ss_dssp CCCCCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred HhccccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence 44455677999999999999999999999999999999999987788999999999999999999999999998753
No 9
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=148.37 Aligned_cols=72 Identities=39% Similarity=0.666 Sum_probs=67.2
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
.....+||+||||+++|+.++||+|||+|+++||||+++.++.+.+.|+.|++||+||+||.+|..||....
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 345689999999999999999999999999999999998888899999999999999999999999998654
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=1.6e-20 Score=140.73 Aligned_cols=69 Identities=45% Similarity=0.752 Sum_probs=64.3
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
..+||+||||+++||.++|++||++|+++||||+++. +.+.+.|+.|+.||++|+||.+|..||.+|..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 70 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccc
Confidence 3689999999999999999999999999999999964 56889999999999999999999999999863
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.7e-20 Score=144.26 Aligned_cols=71 Identities=39% Similarity=0.718 Sum_probs=66.6
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
+....+||+||||+++|+.++||+|||+|+++||||+++ .+.+.+.|+.|+.||+||+||.+|..||.+|.
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 456789999999999999999999999999999999996 57899999999999999999999999999885
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.7e-20 Score=145.22 Aligned_cols=74 Identities=54% Similarity=0.888 Sum_probs=67.8
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhcCChhHHHhhhccCCCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYDQTGCVD 98 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~-~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~ 98 (282)
.....+||+||||+++|+.++||+||++|+++||||+++.. +.+.+.|+.|+.||+||+||.+|..||..|...
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 34568999999999999999999999999999999999765 478899999999999999999999999998753
No 13
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=3e-20 Score=142.89 Aligned_cols=72 Identities=54% Similarity=0.727 Sum_probs=66.6
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.....+||+||||+++|+.++||+|||+|+++||||+++. +.+.+.|+.|++||++|+||.+|..||.+|..
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 3456899999999999999999999999999999999964 66889999999999999999999999999874
No 14
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.81 E-value=3e-20 Score=161.41 Aligned_cols=90 Identities=36% Similarity=0.641 Sum_probs=76.3
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCCCcCCcccc
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGDVVQ 108 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~~~~~~~~~ 108 (282)
.|||+||||+++||.++||+|||+|+++||||+++.++++.++|+.|++||++|+||.+|..||.+|........+....
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~~~~~~ 81 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQGGQYE 81 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTCSCCCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccccccccc
Confidence 58999999999999999999999999999999998888899999999999999999999999999997543322334445
Q ss_pred cHHHHHHHhhc
Q 023405 109 NLKEFFGAMYK 119 (282)
Q Consensus 109 ~~~~~f~~~f~ 119 (282)
.| .||+..|+
T Consensus 82 ~~-~~~~~~fg 91 (210)
T 3apq_A 82 SW-SYYRYDFG 91 (210)
T ss_dssp CH-HHHHHSSS
T ss_pred cc-cccccccc
Confidence 55 46665554
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.81 E-value=2.4e-20 Score=144.56 Aligned_cols=74 Identities=36% Similarity=0.625 Sum_probs=66.9
Q ss_pred CCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 24 SSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD------EEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 24 ~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~------~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
......+||+||||+++|+.++||+|||+|+++||||+++.. +.+.+.|+.|++||+||+||.+|..||.....
T Consensus 11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 345678999999999999999999999999999999998743 46889999999999999999999999998653
No 16
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.79 E-value=3.5e-19 Score=157.52 Aligned_cols=147 Identities=16% Similarity=0.253 Sum_probs=105.2
Q ss_pred CCCccccccccCccCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHhcCChhHHHhhhc--cC
Q 023405 25 SSNDKDLYEVLGVERT--ASQQEIKKAYYKLALRLHPDKNPGDE-----EAKEKFQQLQKVISILGDEEKRALYDQ--TG 95 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~--as~~eIKkAYrklal~~HPDk~~~~~-----~a~~~F~~I~~AY~iLsdp~~R~~YD~--~G 95 (282)
+....|||+||||+++ ++..+||++||+|+++||||+++..+ .|.+.|+.|++||+||+||.+|+.||. .|
T Consensus 39 ~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G 118 (207)
T 3bvo_A 39 PDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHG 118 (207)
T ss_dssp CCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhcC
Confidence 3456899999999986 79999999999999999999997643 367889999999999999999999994 45
Q ss_pred CC-CCC-CcCCcc-c----ccHHHHHHHhhccCCHHHHHhhhhccCCCchhh-hHHHHHHHHhcChhhHHHhhhcccCcc
Q 023405 96 CV-DDA-DLAGDV-V----QNLKEFFGAMYKKVTEADIEEFEANYRGSDSEK-KDLIDLYKKYKGNMNRLFCSMLCSDQK 167 (282)
Q Consensus 96 ~~-~~~-~~~~~~-~----~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~-~dl~~~y~~~~G~~~~i~~~v~~s~~~ 167 (282)
.. .+. ....+. + -.|.+.+... .+.+++..|...+++..++. .++..+|. .|++..+.+.|.
T Consensus 119 ~~~~~e~~~~~d~~fLme~me~~E~le~~---~~~~~l~~l~~~~~~~~~~~~~~l~~~~~--~~d~~~A~~~v~----- 188 (207)
T 3bvo_A 119 IEIPERTDYEMDRQFLIEIMEINEKLAEA---ESEAAMKEIESIVKAKQKEFTDNVSSAFE--QDDFEEAKEILT----- 188 (207)
T ss_dssp CCCCSSCSSSSCHHHHHHHHHHHHHHHHC---CSHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHH-----
T ss_pred CCcccccccCCCHHHHHHHHHHHHHHHHc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHH-----
Confidence 42 111 111111 0 1233333332 35678899988888877666 67888886 688888776665
Q ss_pred CChHHHHHHHHHHHHc
Q 023405 168 LDSHRFKDILDETIAA 183 (282)
Q Consensus 168 ~de~R~~~ii~~~I~~ 183 (282)
.=||..-|...|+.
T Consensus 189 --kL~y~~kl~~~i~~ 202 (207)
T 3bvo_A 189 --KMRYFSNIEEKIKL 202 (207)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHH
Confidence 23444444555544
No 17
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=9.6e-20 Score=143.44 Aligned_cols=69 Identities=45% Similarity=0.758 Sum_probs=64.5
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhcCChhHHHhhhccCCC
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYDQTGCV 97 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~-~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~ 97 (282)
.|||+||||+++||.++||+|||+|+++||||+++.. +.+.+.|+.|++||+||+||.+|..||.+|..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~ 71 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRE 71 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 5899999999999999999999999999999999765 46889999999999999999999999998854
No 18
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2e-19 Score=139.40 Aligned_cols=67 Identities=48% Similarity=0.851 Sum_probs=62.5
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
...+||+||||+++||.++|++||++|+++||||+++..+ +.|+.|++||+||+||.+|..||.+|.
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 72 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQKREIYDQYGL 72 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCH---HHHHHHHHHHHHHTSHHHHHHHHHHCH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChH---HHHHHHHHHHHHHCCHHHHHHHHHHCH
Confidence 5689999999999999999999999999999999997653 589999999999999999999999875
No 19
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.75 E-value=1.6e-19 Score=145.82 Aligned_cols=84 Identities=26% Similarity=0.398 Sum_probs=69.9
Q ss_pred ccccccccCccCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCCC-CcCC
Q 023405 28 DKDLYEVLGVERTASQ--QEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDA-DLAG 104 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~--~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~~-~~~~ 104 (282)
..+||+||||+++|+. ++||+|||+|+++||||+++. .++|+.|+.||+||+||.+|..||.+|..... ..+.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~~~~~~~ 82 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDATEIPT 82 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCCCCCCCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhcccccccccCCC
Confidence 4689999999999999 999999999999999999965 36899999999999999999999998865322 2223
Q ss_pred cccccHHHHHH
Q 023405 105 DVVQNLKEFFG 115 (282)
Q Consensus 105 ~~~~~~~~~f~ 115 (282)
.+...|.++|+
T Consensus 83 ~g~p~w~~w~~ 93 (114)
T 1gh6_A 83 YGTDEWEQWWN 93 (114)
T ss_dssp CSSSCHHHHHH
T ss_pred CCCchHHHHHh
Confidence 34457777764
No 20
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.75 E-value=2e-20 Score=175.87 Aligned_cols=128 Identities=28% Similarity=0.436 Sum_probs=19.4
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCCC-CCc---
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDD-ADL--- 102 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~~-~~~--- 102 (282)
...|||+||||+++||.++||+|||+|+++||||+++. +.|.++|+.|++||+||+||.+|..||.++.... ..+
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~ 104 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQ 104 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccc
Confidence 34799999999999999999999999999999999964 5789999999999999999999999999843211 011
Q ss_pred -C--Ccc--cccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHH
Q 023405 103 -A--GDV--VQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRL 157 (282)
Q Consensus 103 -~--~~~--~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i 157 (282)
. +++ ..+|.++|..+|+...... ......+|.+.+...-+.+.+.|.|....|
T Consensus 105 ~~~~~~~f~~~~f~diF~~~Fg~~g~~~--~~~~~~~g~Dl~~~l~vsleea~~G~~k~i 162 (329)
T 3lz8_A 105 RQTHEQSYSQQDFDDIFSSMFGQQAHQR--RRQHAARGHDLEIEVAVFLEETLAEQTRTI 162 (329)
T ss_dssp ----------------------------------CCCCCCEEEEECCCTTGGGSCEEEEE
T ss_pred cccccCCcCCCchhhhhHhhhcCcCCCC--CCCCcCCCCCEEEEEecchhhhhhccceEE
Confidence 0 111 1257788888887421100 011245678877777778888888876655
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=2.7e-18 Score=144.74 Aligned_cols=72 Identities=36% Similarity=0.613 Sum_probs=65.3
Q ss_pred CCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHhcCChhHHHhhhccC
Q 023405 24 SSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDE------EAKEKFQQLQKVISILGDEEKRALYDQTG 95 (282)
Q Consensus 24 ~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~------~a~~~F~~I~~AY~iLsdp~~R~~YD~~G 95 (282)
+.....|||+||||+++|+.++||+|||+|++++|||+++..+ .|.+.|+.|++||+||+||.+|+.||..+
T Consensus 5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3456689999999999999999999999999999999997653 47899999999999999999999999865
No 22
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=4e-18 Score=131.74 Aligned_cols=63 Identities=37% Similarity=0.530 Sum_probs=58.0
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHh
Q 023405 27 NDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRAL 90 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~ 90 (282)
...+||+||||+++|+.++||+|||+|+++||||+++. +.+.+.|+.|+.||++|+||.+|..
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 35899999999999999999999999999999999964 6688899999999999999988764
No 23
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.70 E-value=8e-18 Score=144.96 Aligned_cols=69 Identities=23% Similarity=0.326 Sum_probs=62.1
Q ss_pred CccccccccCccCCCC--HHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHhcCChhHHHhhhccC
Q 023405 27 NDKDLYEVLGVERTAS--QQEIKKAYYKLALRLHPDKNPGDEE-----AKEKFQQLQKVISILGDEEKRALYDQTG 95 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as--~~eIKkAYrklal~~HPDk~~~~~~-----a~~~F~~I~~AY~iLsdp~~R~~YD~~G 95 (282)
...|||+||||+++++ ..+|+++||+|+++||||++++.+. |...|+.|+.||+||+||.+|..||...
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 4679999999999988 9999999999999999999976653 7789999999999999999999999853
No 24
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.67 E-value=6.1e-17 Score=139.11 Aligned_cols=67 Identities=19% Similarity=0.265 Sum_probs=61.7
Q ss_pred ccccccCccCCC--CHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 30 DLYEVLGVERTA--SQQEIKKAYYKLALRLHPDKNPGDE-----EAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 30 d~Y~vLgv~~~a--s~~eIKkAYrklal~~HPDk~~~~~-----~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
|||+||||++++ |..+|+++||+|+++||||++++.+ .|...|+.|+.||+||+||.+|..||....
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 9999999999999999999997654 367899999999999999999999998643
No 25
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.67 E-value=1.1e-17 Score=129.05 Aligned_cols=67 Identities=31% Similarity=0.353 Sum_probs=60.3
Q ss_pred cCCCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHhcCChhHH
Q 023405 22 NRSSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDE-EAKEKFQQLQKVISILGDEEKR 88 (282)
Q Consensus 22 ~~~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~-~a~~~F~~I~~AY~iLsdp~~R 88 (282)
...+....++|+||||+++||.++||+|||+|+++||||++++++ .|.+.|+.|++||+||+|...|
T Consensus 9 ~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 9 VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp CCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 444556789999999999999999999999999999999998764 6899999999999999998766
No 26
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.65 E-value=5.5e-18 Score=173.07 Aligned_cols=75 Identities=41% Similarity=0.744 Sum_probs=40.9
Q ss_pred CCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCCCC
Q 023405 24 SSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVD 98 (282)
Q Consensus 24 ~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~~~ 98 (282)
......|||+||||+++||.++||+|||+|+++||||++++++.|.++|+.|++||++|+||.+|..||.+|...
T Consensus 16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~ 90 (780)
T 3apo_A 16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 90 (780)
T ss_dssp -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----
T ss_pred CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccc
Confidence 345678999999999999999999999999999999999878889999999999999999999999999999753
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.65 E-value=8.7e-18 Score=144.83 Aligned_cols=66 Identities=30% Similarity=0.445 Sum_probs=58.5
Q ss_pred CccccccccCccCCCC--HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 27 NDKDLYEVLGVERTAS--QQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 27 ~~~d~Y~vLgv~~~as--~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
...+||+||||+++|+ .++||+|||+||+++|||++++ .++|+.|++||+||+||.+|+.||.+|.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 3479999999999998 6999999999999999999865 2689999999999999999999999995
No 28
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.64 E-value=8.3e-17 Score=121.64 Aligned_cols=64 Identities=25% Similarity=0.360 Sum_probs=57.2
Q ss_pred ccccccccCccCC--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhccCC
Q 023405 28 DKDLYEVLGVERT--ASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGC 96 (282)
Q Consensus 28 ~~d~Y~vLgv~~~--as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~G~ 96 (282)
..++|+||||+++ +|..+||+|||+|+++||||+++. .+.|+.|+.||++|+|+.+|..+ .+|.
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~-~~g~ 75 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRM-NLGG 75 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTT-CCSS
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHH-hcCC
Confidence 4689999999999 999999999999999999999853 46899999999999999999984 4554
No 29
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.63 E-value=4.9e-17 Score=141.00 Aligned_cols=67 Identities=27% Similarity=0.449 Sum_probs=61.0
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCchH---HHHHHHHHHHHHHhcCChhHHHhh
Q 023405 25 SSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEE---AKEKFQQLQKVISILGDEEKRALY 91 (282)
Q Consensus 25 ~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~~---a~~~F~~I~~AY~iLsdp~~R~~Y 91 (282)
.+...+||+||||+++||.++||+|||+|+++||||++++.+. |.+.|+.|++||+||+||.+|..|
T Consensus 113 l~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 113 LWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp SCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred hcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3444799999999999999999999999999999999976543 889999999999999999999887
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.62 E-value=9.2e-17 Score=125.02 Aligned_cols=56 Identities=27% Similarity=0.421 Sum_probs=52.0
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHhcCC
Q 023405 29 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDE---EAKEKFQQLQKVISILGD 84 (282)
Q Consensus 29 ~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~~---~a~~~F~~I~~AY~iLsd 84 (282)
.++|++|||++.||.++||+|||+++++||||++++++ .|...|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999998765 488999999999999964
No 31
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.61 E-value=2.8e-16 Score=125.21 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=56.1
Q ss_pred hccCCCCCccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCC---ch----HHHHHHHHHHHHHHhcCChh
Q 023405 20 NLNRSSSNDKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPG---DE----EAKEKFQQLQKVISILGDEE 86 (282)
Q Consensus 20 ~~~~~~~~~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~---~~----~a~~~F~~I~~AY~iLsdp~ 86 (282)
.+....+...+||+|||++. ||.++||+|||+|+++||||+++. .+ .|.++|+.|++||+||+|+.
T Consensus 32 ~l~~~l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 32 TLQYILWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TGGGTSCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHhcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 34444556689999999996 999999999999999999999863 11 47899999999999999974
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.59 E-value=2.9e-16 Score=136.13 Aligned_cols=68 Identities=24% Similarity=0.362 Sum_probs=60.8
Q ss_pred CCCCcccccccc------CccC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhhcc
Q 023405 24 SSSNDKDLYEVL------GVER-TASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQT 94 (282)
Q Consensus 24 ~~~~~~d~Y~vL------gv~~-~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD~~ 94 (282)
+.....|||+|| |+++ +||..+||+|||+|+++||||++++ +.+.|+.|+.||+||+||.+|..||..
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 345678999999 4665 8999999999999999999999976 678899999999999999999999984
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2.2e-15 Score=111.47 Aligned_cols=57 Identities=21% Similarity=0.349 Sum_probs=50.7
Q ss_pred ccccccccCccC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHH
Q 023405 28 DKDLYEVLGVER-TASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKR 88 (282)
Q Consensus 28 ~~d~Y~vLgv~~-~as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R 88 (282)
..++|+||||++ ++|.++|++|||+|+++||||++ +++ +.|+.|+.||++|+++..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~-g~~---~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG-GSP---FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT-CCH---HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCH---HHHHHHHHHHHHHhhhhhc
Confidence 468999999999 79999999999999999999997 333 5899999999999987654
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.00 E-value=1.9e-10 Score=105.93 Aligned_cols=66 Identities=42% Similarity=0.713 Sum_probs=56.5
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHhcCChhHHHhhhc
Q 023405 28 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD---EEAKEKFQQLQKVISILGDEEKRALYDQ 93 (282)
Q Consensus 28 ~~d~Y~vLgv~~~as~~eIKkAYrklal~~HPDk~~~~---~~a~~~F~~I~~AY~iLsdp~~R~~YD~ 93 (282)
..++|.+||+.++++..+|+++|+++++++|||+.+.. ..+...|+.|++||++|+||.+|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 34899999999999999999999999999999999764 3588999999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.50 E-value=7.6e-08 Score=69.94 Aligned_cols=51 Identities=12% Similarity=0.083 Sum_probs=43.3
Q ss_pred ccccccCccCC---CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCC
Q 023405 30 DLYEVLGVERT---ASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGD 84 (282)
Q Consensus 30 d~Y~vLgv~~~---as~~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsd 84 (282)
.-|.||||+++ ++.++|+++||+|...+|||+.. . .-.+..|+.|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S---~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-S---FYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-C---HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHHH
Confidence 34789999999 99999999999999999999973 2 2456789999998853
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.51 E-value=0.3 Score=48.69 Aligned_cols=53 Identities=13% Similarity=0.194 Sum_probs=39.5
Q ss_pred ccCCCCCccccccccCccCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHh
Q 023405 21 LNRSSSNDKDLYEVLGVERTASQ--QEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISI 81 (282)
Q Consensus 21 ~~~~~~~~~d~Y~vLgv~~~as~--~eIKkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~i 81 (282)
+........+||.+||++.+... .+|++|||+|++..+++ .+++..|..|+.|
T Consensus 621 l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 621 LDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp HHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred HHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 33334455669999999766554 67999999999977655 2578888888876
No 37
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.30 E-value=92 Score=21.95 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=30.4
Q ss_pred cccccHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHHHhhhcc
Q 023405 105 DVVQNLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRLFCSMLC 163 (282)
Q Consensus 105 ~~~~~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i~~~v~~ 163 (282)
..+......+..||+.+..+.|. .....+.|+++.-++.++.
T Consensus 16 ~~~~~~v~~L~~MFP~lD~~vI~-----------------~vL~a~~G~vd~aId~LL~ 57 (67)
T 2dhy_A 16 LEFNQAMDDFKTMFPNMDYDIIE-----------------CVLRANSGAVDATIDQLLQ 57 (67)
T ss_dssp CCSHHHHHHHHHHCSSSCHHHHH-----------------HHHHHHTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCHHHHH-----------------HHHHHcCCCHHHHHHHHHh
Confidence 34556677888999887665554 5677899999887777653
No 38
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=25.75 E-value=67 Score=22.01 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=29.0
Q ss_pred cHHHHHHHhhccCCHHHHHhhhhccCCCchhhhHHHHHHHHhcChhhHHHhhhcccC
Q 023405 109 NLKEFFGAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYKKYKGNMNRLFCSMLCSD 165 (282)
Q Consensus 109 ~~~~~f~~~f~~~t~~~i~~f~~~yrgs~ee~~dl~~~y~~~~G~~~~i~~~v~~s~ 165 (282)
.--.++..+|+.++.+.|. ..+..+.|+++..++.++...
T Consensus 11 e~l~~L~emFP~ld~~~I~-----------------~vL~a~~gdvd~aI~~LL~m~ 50 (59)
T 1wgl_A 11 EDLKAIQDMFPNMDQEVIR-----------------SVLEAQRGNKDAAINSLLQMG 50 (59)
T ss_dssp HHHHHHHHHCSSSCHHHHH-----------------HHHTTTTTCHHHHHHHHHHSS
T ss_pred HHHHHHHHHCCCCCHHHHH-----------------HHHHHcCCCHHHHHHHHHcCc
Confidence 4455778889887765544 577889999988888776543
No 39
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=21.64 E-value=1.5e+02 Score=19.77 Aligned_cols=41 Identities=27% Similarity=0.202 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhcCChhHHHhhh
Q 023405 47 KKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYD 92 (282)
Q Consensus 47 KkAYrklal~~HPDk~~~~~~a~~~F~~I~~AY~iLsdp~~R~~YD 92 (282)
.+.+|.....-||+.. ..+..+.|...|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~~-----~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH-----NAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTSC-----HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4566777788888876 3466788999999999766554444
No 40
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=21.59 E-value=40 Score=22.80 Aligned_cols=23 Identities=22% Similarity=0.484 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHHcCCCcchhh
Q 023405 169 DSHRFKDILDETIAAGELKATKA 191 (282)
Q Consensus 169 de~R~~~ii~~~I~~g~~~~~~~ 191 (282)
|..|..++++.+-.+|+||..+-
T Consensus 8 Dv~RaiELle~lq~sgevp~~KL 30 (53)
T 1zl8_A 8 DVQRILELMEHVQKTGEVNNAKL 30 (53)
T ss_dssp HHHHHHHHHHHHGGGSSSTHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcHHH
Confidence 78899999999999999997653
No 41
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=21.55 E-value=1.6e+02 Score=21.04 Aligned_cols=52 Identities=12% Similarity=0.229 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHHHHHHHhcCCh-hHHHhhhcc
Q 023405 42 SQQEIKKAYYKLALRLHPDKNPGDE--EAKEKFQQLQKVISILGDE-EKRALYDQT 94 (282)
Q Consensus 42 s~~eIKkAYrklal~~HPDk~~~~~--~a~~~F~~I~~AY~iLsdp-~~R~~YD~~ 94 (282)
-..-++.+++.+.....|....... ++...|.... +|..|.++ .++.+|+.+
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeY 61 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDF 61 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHH
Confidence 4566888999998888787775553 6777777666 78888664 566666654
Done!