BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023406
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 117/158 (74%), Gaps = 11/158 (6%)
Query: 12 ENGVMMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHL 71
++G+++T DPKPRLRWT +LH+RFVDAV +LGGPDKATPK+++R+MG+KGLTLYHLKSHL
Sbjct: 24 DSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHL 83
Query: 72 Q-YRLGQQTRRQHGADQHKENNGGSSFVNFYNGSLATSMTSSRGDEDQGPISEALKCQAE 130
Q +RLG+Q +++G KE + S+ N + ++ M S +E Q E
Sbjct: 84 QKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMNE----------MQME 133
Query: 131 VQQRLQEQLEVQERLQMRIEAQGKYLQAILQKAQKSLS 168
VQ+RL EQLEVQ LQ+RIEAQGKY+Q+IL++A ++L+
Sbjct: 134 VQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLA 171
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 96/148 (64%), Gaps = 17/148 (11%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQ--- 77
K R+RWT +LH+ FV+AV +LGG ++ATPK+VL+L+ GLT+YH+KSHLQ YR +
Sbjct: 231 KQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYRTARYKP 290
Query: 78 QTRRQHGADQHKENNGGSSFVNFYNGSLATSMTSSRGDEDQGPISEALKCQAEVQQRLQE 137
+T G Q K+ +S + + + TS+ I++AL+ Q EVQ+RL E
Sbjct: 291 ETSEVTGEPQEKK---MTSIEDIKSLDMKTSVE----------ITQALRLQMEVQKRLHE 337
Query: 138 QLEVQERLQMRIEAQGKYLQAILQKAQK 165
QLE+Q LQ++IE QG+YLQ + +K QK
Sbjct: 338 QLEIQRSLQLQIEKQGRYLQMMFEKQQK 365
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 18 TRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YR 74
R P PRLRWT +LH FV AV LGG KATPK VL++M +KGLT+ H+KSHLQ YR
Sbjct: 19 VRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYR 76
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 23 PRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQTRR 81
PR+RWT+ LH RFV AV LGG ++ATPKSVL LM +K LTL H+KSHLQ YR + T +
Sbjct: 220 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTNK 279
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 23 PRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQT 79
PR+RWT LH RFV AV LGG ++ATPKSVL LM +K LTL H+KSHLQ YR + T
Sbjct: 214 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTT 271
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 23 PRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQTRR 81
PR+RWT+ LH RFV AV LGG ++ATPKSVL LM +K LTL H+KSHLQ YR + T +
Sbjct: 325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKSTDK 384
Query: 82 QHGADQHKENNGGS 95
A +GGS
Sbjct: 385 P--AASSGPADGGS 396
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 23 PRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YR 74
PR+RWT+ LH FV AV LGG ++ATPKSVL LM +K LTL H+KSHLQ YR
Sbjct: 106 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 158
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 23 PRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQTRR 81
PR+RWT LH FV AV LGG ++ATPKSVL LM ++ LTL H+KSHLQ YR + T +
Sbjct: 165 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIKSTEK 224
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQTR 80
KPR+ W+ +LH +FV AV +LG DKA PK +L +M + GLT ++ SHLQ YR+ R
Sbjct: 216 KPRVVWSVELHQQFVAAVNQLGV-DKAVPKKILEMMNVPGLTRENVASHLQKYRI--YLR 272
Query: 81 RQHGADQHKEN 91
R G QH+ N
Sbjct: 273 RLGGVSQHQGN 283
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQTR 80
KPR+ W+ +LH +FV AV +LG +KA PK +L LM + GLT ++ SHLQ YR+ R
Sbjct: 237 KPRVVWSVELHQQFVAAVNQLGV-EKAVPKKILELMNVPGLTRENVASHLQKYRI--YLR 293
Query: 81 RQHGADQHKEN 91
R G QH+ N
Sbjct: 294 RLGGVSQHQGN 304
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRL 75
KPR+ W+ +LH +FV AV +LG DKA PK +L LM ++GLT ++ SHLQ YRL
Sbjct: 194 KPRVVWSQELHQKFVSAVQQLGL-DKAVPKKILDLMSIEGLTRENVASHLQKYRL 247
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRL 75
K R+ W+ +LH +FV+AV KLG DKA PK +L LM + GL+ ++ SHLQ +RL
Sbjct: 200 KSRVVWSIELHQQFVNAVNKLG-IDKAVPKRILELMNVPGLSRENVASHLQKFRL 253
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQTR 80
KP++ WT +LH +FV AV +LG DKA P +L +M +K LT +++ SHLQ YR +
Sbjct: 147 KPKVDWTPELHRKFVQAVEQLGV-DKAVPSRILEIMNVKSLTRHNVASHLQKYR----SH 201
Query: 81 RQH 83
R+H
Sbjct: 202 RKH 204
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQTR 80
K ++ WT +LH RFV AV +LG DKA P +L LMG++ LT +++ SHLQ YR +
Sbjct: 215 KVKVDWTPELHRRFVQAVEQLGI-DKAVPSRILELMGIECLTRHNIASHLQKYR----SH 269
Query: 81 RQH 83
R+H
Sbjct: 270 RKH 272
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLM----GLKGLTLYHLKSHLQ-YR 74
KPR++WT +LH +F AV K+G +KA PK++L+ M ++GLT ++ SHLQ YR
Sbjct: 211 KPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYR 268
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 21/104 (20%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YR------ 74
K ++ WT +LH RFV+AV +LG DKA P +L LMG+ LT +++ SHLQ YR
Sbjct: 153 KVKVDWTPELHRRFVEAVEQLGV-DKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHL 211
Query: 75 ------LGQQTRRQH--GADQHKENNGGSSFVNFYNGSLATSMT 110
TR++H G D NG + NG LA + T
Sbjct: 212 LAREAEAANWTRKRHIYGVDTGANLNGRTK-----NGWLAPAPT 250
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Query: 25 LRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQTRRQH 83
+ WT +LH RFV AV +LG DKA P +L +MG+ LT +++ SHLQ YR + R+H
Sbjct: 183 VDWTPELHRRFVQAVEQLGI-DKAVPSRILEIMGIDSLTRHNIASHLQKYR----SHRKH 237
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQ-- 78
K RL WT LH +F+ AV LG DKA PK +L +M +K LT + SHLQ YR+ +
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGE-DKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKS 256
Query: 79 --TRRQHGA 85
T +HGA
Sbjct: 257 IPTTSKHGA 265
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRLGQQ-- 78
K RL WT LH +F+ AV LG DKA PK +L +M +K LT + SHLQ YR+ +
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGE-DKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKS 256
Query: 79 --TRRQHGA 85
T +HGA
Sbjct: 257 IPTTSKHGA 265
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSV---LRLMGLKGLTLYHLKSHLQYRLGQQ 78
KPR+ WT +LH +F++A+ +GG +KA PK + L+ M ++G+T ++ SHL Q+
Sbjct: 215 KPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHL-----QK 269
Query: 79 TRRQHGADQHKENNGGSSFVNFYNGSLATSMTSS 112
R +Q + G+ + Y G+LA S+ S
Sbjct: 270 HRINLEENQIPQQTQGNGWATAY-GTLAPSLQGS 302
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRL 75
K R+ WT +LH +FV AV +LG +KA PK +L LM ++ LT ++ SHLQ +RL
Sbjct: 195 KQRVVWTVELHKKFVAAVNQLGY-EKAMPKKILDLMNVEKLTRENVASHLQKFRL 248
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ 72
KPR+ WT +LH++F+ AV LG ++A PK +L LM + LT ++ SHLQ
Sbjct: 183 KPRVLWTHELHNKFLAAVDHLGV-ERAVPKKILDLMNVDKLTRENVASHLQ 232
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 24 RLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ-YRL 75
R+ W+ +LH +FV+AV ++G KA PK +L LM + LT ++ SHLQ YRL
Sbjct: 195 RVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 10 PYENGVMMTRDPKPR-LRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLK 68
P ++G M++ K + ++WT LHD F+ A+ +G DKA PK +L M + LT ++
Sbjct: 209 PSDDGESMSQPAKKKKIQWTDSLHDLFLQAIRHIGL-DKAVPKKILAFMSVPYLTRENVA 267
Query: 69 SHLQ-YRL 75
SHLQ YR+
Sbjct: 268 SHLQKYRI 275
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 10 PYENGVMMTRDPKPR-LRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLK 68
P ++G +++ PK + + WT L D F+ A+ +G DK PK +L +M + LT ++
Sbjct: 212 PSDDGESLSQPPKKKKIWWTNPLQDLFLQAIQHIGY-DKVVPKKILAIMNVPYLTRENVA 270
Query: 69 SHLQ-YRLGQQTRRQHGADQHKENNGGSS----------FVNFYNGSLATSMTS 111
SHLQ YRL + G + G S +VN+Y S + TS
Sbjct: 271 SHLQKYRLFVKRVVHQGRFSMLSDRGKDSMFRQTHIKEPYVNYYTPSTSWYETS 324
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 24 RLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ 72
++ WT +LH +FV AV +LG D+A P +L LM + LT +++ SHLQ
Sbjct: 298 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVGTLTRHNVASHLQ 345
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 22 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ 72
K R+ W +LH F++AV LG ++A PK +L +M + ++ ++ SHLQ
Sbjct: 223 KRRVVWDEELHQNFLNAVDFLGL-ERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 27 WTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQ 72
W ++ H +F+ A++ LG D PKS+L +M LT + SHLQ
Sbjct: 227 WNSERHMKFIAAISILGEED-FRPKSILEIMNDPNLTHRQVGSHLQ 271
>sp|Q1GDK6|DCUP_RUEST Uroporphyrinogen decarboxylase OS=Ruegeria sp. (strain TM1040)
GN=hemE PE=3 SV=1
Length = 345
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 89 KENNGGSSFVNFYNG--SLATSMTSSRGDEDQGPISEALKCQAEVQQRLQEQLEVQERLQ 146
KE ++ + F ++AT M + RG DQGP + AL +QE + E L
Sbjct: 131 KELPSETTLIGFAGAPWTVATYMIAGRGTPDQGP-AHAL---------MQENTPLFEALL 180
Query: 147 MRI-EAQGKYLQAILQKAQKSLSVDSSVTGNVNAEA 181
RI EA YL A ++ + + + S G++ EA
Sbjct: 181 ARITEATISYLSAQIEAGAEVVKIFDSWAGSLKGEA 216
>sp|Q5RAJ5|STK36_PONAB Serine/threonine-protein kinase 36 OS=Pongo abelii GN=STK36 PE=2
SV=1
Length = 1315
Score = 33.1 bits (74), Expect = 2.4, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 16 MMTRDPKPRLRWTADLHDRF----VDAVTKLGGPDKATP 50
++T+DP+ RL W L+ F V +T+ GPD TP
Sbjct: 234 LLTKDPRQRLSWPDLLYHPFIAGHVTIITETAGPDLGTP 272
>sp|P03049|RMNT_BPP22 Regulatory protein mnt OS=Enterobacteria phage P22 GN=mnt PE=1 SV=3
Length = 83
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 139 LEVQERLQMRIEAQGKYLQA-ILQKAQKSLSVDSSVTGNVN 178
+EV+E+L+ R EA G+ + + +LQ Q +LS S VTG N
Sbjct: 14 MEVREKLKFRAEANGRSMNSELLQIVQDALSKPSPVTGYRN 54
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,604,790
Number of Sequences: 539616
Number of extensions: 4381740
Number of successful extensions: 14033
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 13648
Number of HSP's gapped (non-prelim): 361
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)