Query 023411
Match_columns 282
No_of_seqs 308 out of 2945
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:20:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 2.2E-36 7.4E-41 261.6 21.5 216 64-282 4-220 (242)
2 3dr5_A Putative O-methyltransf 100.0 2.6E-35 8.8E-40 251.5 22.7 204 69-281 5-212 (221)
3 3c3y_A Pfomt, O-methyltransfer 100.0 6.6E-34 2.3E-38 245.1 25.2 216 64-282 12-236 (237)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 6.5E-34 2.2E-38 246.8 24.0 217 63-282 20-246 (247)
5 3tr6_A O-methyltransferase; ce 100.0 4E-33 1.4E-37 237.4 27.4 218 62-282 5-224 (225)
6 3cbg_A O-methyltransferase; cy 100.0 2.6E-33 8.8E-38 240.6 25.6 224 56-282 8-232 (232)
7 2avd_A Catechol-O-methyltransf 100.0 9.6E-32 3.3E-36 229.4 27.1 213 67-282 16-229 (229)
8 3duw_A OMT, O-methyltransferas 100.0 1.2E-31 4E-36 228.1 27.4 209 70-282 8-222 (223)
9 3tfw_A Putative O-methyltransf 100.0 6.1E-31 2.1E-35 228.0 26.1 208 69-282 12-225 (248)
10 3ntv_A MW1564 protein; rossman 100.0 2E-31 7E-36 228.7 19.7 208 64-282 17-231 (232)
11 2hnk_A SAM-dependent O-methylt 100.0 3.9E-30 1.3E-34 221.4 27.2 215 65-282 5-231 (239)
12 3c3p_A Methyltransferase; NP_9 100.0 1.3E-29 4.5E-34 213.7 20.1 203 68-282 6-209 (210)
13 3u81_A Catechol O-methyltransf 100.0 1.7E-27 5.7E-32 202.6 22.9 198 69-282 6-213 (221)
14 2gpy_A O-methyltransferase; st 100.0 6.1E-27 2.1E-31 200.4 20.8 206 68-282 4-214 (233)
15 3cvo_A Methyltransferase-like 99.8 1.2E-18 4.2E-23 145.3 13.8 153 97-270 10-182 (202)
16 2wk1_A NOVP; transferase, O-me 99.7 1.3E-17 4.4E-22 146.2 11.1 158 103-281 86-280 (282)
17 2b2c_A Spermidine synthase; be 99.7 6.9E-17 2.4E-21 144.2 11.6 149 118-282 107-269 (314)
18 3fpf_A Mtnas, putative unchara 99.7 1.1E-15 3.7E-20 134.5 18.9 108 113-233 116-223 (298)
19 3jwg_A HEN1, methyltransferase 99.7 2E-16 6.7E-21 133.4 13.6 163 103-275 13-194 (219)
20 2o07_A Spermidine synthase; st 99.7 8.8E-17 3E-21 143.0 11.8 147 118-281 94-255 (304)
21 3jwh_A HEN1; methyltransferase 99.7 1.5E-16 5.1E-21 134.0 12.3 164 102-275 12-194 (217)
22 3p9n_A Possible methyltransfer 99.7 1.2E-15 4E-20 126.0 16.3 110 118-235 43-156 (189)
23 3e05_A Precorrin-6Y C5,15-meth 99.7 4.8E-16 1.6E-20 129.7 14.0 120 104-234 25-144 (204)
24 3njr_A Precorrin-6Y methylase; 99.7 9E-16 3.1E-20 128.6 15.4 118 103-234 39-156 (204)
25 2bm8_A Cephalosporin hydroxyla 99.7 1.1E-16 3.8E-21 137.3 10.0 116 105-233 67-188 (236)
26 3hm2_A Precorrin-6Y C5,15-meth 99.7 5E-16 1.7E-20 126.2 11.0 116 108-234 14-129 (178)
27 4gek_A TRNA (CMO5U34)-methyltr 99.7 7.4E-16 2.5E-20 134.1 12.7 115 110-235 59-181 (261)
28 3mti_A RRNA methylase; SAM-dep 99.7 8.5E-16 2.9E-20 126.1 12.3 135 118-271 21-167 (185)
29 1uir_A Polyamine aminopropyltr 99.6 1E-15 3.6E-20 136.6 13.0 149 118-281 76-241 (314)
30 2esr_A Methyltransferase; stru 99.6 7.6E-16 2.6E-20 125.5 10.9 111 117-235 29-141 (177)
31 3eey_A Putative rRNA methylase 99.6 1.6E-15 5.5E-20 125.6 12.9 140 117-271 20-171 (197)
32 1nkv_A Hypothetical protein YJ 99.6 1E-15 3.6E-20 131.7 11.8 124 102-237 19-145 (256)
33 1mjf_A Spermidine synthase; sp 99.6 2.2E-15 7.6E-20 132.5 13.6 145 118-281 74-238 (281)
34 3f4k_A Putative methyltransfer 99.6 1E-15 3.5E-20 131.8 10.7 111 116-237 43-155 (257)
35 3kkz_A Uncharacterized protein 99.6 1.1E-15 3.7E-20 132.8 10.0 110 117-237 44-155 (267)
36 3orh_A Guanidinoacetate N-meth 99.6 3.1E-16 1.1E-20 134.4 6.2 110 118-238 59-176 (236)
37 1xdz_A Methyltransferase GIDB; 99.6 1.2E-14 4.2E-19 124.5 15.8 105 118-231 69-173 (240)
38 1xj5_A Spermidine synthase 1; 99.6 4.2E-15 1.4E-19 133.8 13.0 113 118-238 119-242 (334)
39 2fpo_A Methylase YHHF; structu 99.6 3.9E-15 1.3E-19 124.4 12.0 106 119-233 54-161 (202)
40 1l3i_A Precorrin-6Y methyltran 99.6 1.1E-14 3.6E-19 119.3 13.9 120 102-233 16-135 (192)
41 2ift_A Putative methylase HI07 99.6 2.9E-15 9.9E-20 125.1 10.6 110 119-235 53-166 (201)
42 3mb5_A SAM-dependent methyltra 99.6 5.5E-15 1.9E-19 127.4 12.6 119 102-232 76-194 (255)
43 2fhp_A Methylase, putative; al 99.6 7.3E-15 2.5E-19 120.2 12.8 112 118-234 43-156 (187)
44 3hem_A Cyclopropane-fatty-acyl 99.6 8.3E-15 2.8E-19 129.6 13.6 107 117-237 70-188 (302)
45 3lpm_A Putative methyltransfer 99.6 4.2E-15 1.4E-19 128.9 10.6 114 108-230 37-174 (259)
46 3dxy_A TRNA (guanine-N(7)-)-me 99.6 8.9E-15 3E-19 123.9 12.1 105 119-231 34-149 (218)
47 3dlc_A Putative S-adenosyl-L-m 99.6 5.5E-15 1.9E-19 123.6 10.6 105 122-237 46-153 (219)
48 1iy9_A Spermidine synthase; ro 99.6 9.7E-15 3.3E-19 128.0 12.4 106 118-232 74-189 (275)
49 1kpg_A CFA synthase;, cyclopro 99.6 3.6E-15 1.2E-19 130.8 8.8 107 117-237 62-173 (287)
50 2fk8_A Methoxy mycolic acid sy 99.6 5.8E-15 2E-19 131.5 10.0 107 117-237 88-199 (318)
51 1dus_A MJ0882; hypothetical pr 99.6 2.7E-14 9.2E-19 117.0 13.0 108 113-233 46-158 (194)
52 1ws6_A Methyltransferase; stru 99.6 4.3E-14 1.5E-18 113.8 13.8 109 119-235 41-150 (171)
53 2fca_A TRNA (guanine-N(7)-)-me 99.6 2.8E-14 9.6E-19 120.2 13.2 104 119-231 38-152 (213)
54 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.1E-14 7.2E-19 120.7 12.4 104 119-231 41-155 (214)
55 2ozv_A Hypothetical protein AT 99.6 9.8E-15 3.3E-19 126.8 10.4 119 108-230 25-168 (260)
56 3lbf_A Protein-L-isoaspartate 99.6 1.3E-14 4.5E-19 121.3 10.7 113 103-231 61-173 (210)
57 3m6w_A RRNA methylase; rRNA me 99.6 4.5E-14 1.5E-18 131.9 15.3 145 103-268 85-254 (464)
58 3ajd_A Putative methyltransfer 99.6 6E-14 2E-18 122.8 15.3 145 108-269 72-237 (274)
59 1inl_A Spermidine synthase; be 99.6 2E-14 6.8E-19 127.3 12.3 105 118-231 89-204 (296)
60 3grz_A L11 mtase, ribosomal pr 99.6 3.8E-14 1.3E-18 118.1 13.1 103 118-234 59-161 (205)
61 3bus_A REBM, methyltransferase 99.6 1.1E-14 3.8E-19 126.6 10.1 110 117-237 59-171 (273)
62 2yxd_A Probable cobalt-precorr 99.6 1.6E-13 5.6E-18 111.4 16.2 114 103-233 19-132 (183)
63 3g89_A Ribosomal RNA small sub 99.6 1.5E-14 5E-19 125.0 10.5 103 119-230 80-182 (249)
64 3adn_A Spermidine synthase; am 99.6 1.6E-14 5.4E-19 127.8 10.8 106 118-232 82-198 (294)
65 3dh0_A SAM dependent methyltra 99.5 7.5E-14 2.6E-18 117.2 14.3 114 114-237 32-148 (219)
66 1ixk_A Methyltransferase; open 99.5 8.2E-14 2.8E-18 124.4 15.2 125 101-235 100-249 (315)
67 2pt6_A Spermidine synthase; tr 99.5 3.5E-14 1.2E-18 127.1 12.1 106 118-232 115-230 (321)
68 3evz_A Methyltransferase; NYSG 99.5 4.7E-14 1.6E-18 119.6 12.2 135 117-277 53-210 (230)
69 4dzr_A Protein-(glutamine-N5) 99.5 1.5E-14 5.2E-19 120.6 8.8 96 104-204 11-110 (215)
70 2b3t_A Protein methyltransfera 99.5 6.3E-14 2.1E-18 122.6 13.0 119 102-232 90-238 (276)
71 3g07_A 7SK snRNA methylphospha 99.5 2E-14 6.9E-19 126.9 9.9 114 119-237 46-225 (292)
72 3m4x_A NOL1/NOP2/SUN family pr 99.5 9.6E-14 3.3E-18 129.5 14.9 125 102-235 88-237 (456)
73 1dl5_A Protein-L-isoaspartate 99.5 3.2E-14 1.1E-18 127.0 11.2 116 104-232 60-175 (317)
74 2igt_A SAM dependent methyltra 99.5 3.6E-13 1.2E-17 121.0 18.0 109 118-234 152-274 (332)
75 1nv8_A HEMK protein; class I a 99.5 1.4E-13 4.8E-18 121.1 14.9 117 102-231 103-248 (284)
76 3gdh_A Trimethylguanosine synt 99.5 4.9E-15 1.7E-19 126.7 5.2 113 110-232 69-181 (241)
77 3a27_A TYW2, uncharacterized p 99.5 3.6E-14 1.2E-18 124.1 10.8 108 114-234 114-221 (272)
78 2o57_A Putative sarcosine dime 99.5 4.2E-14 1.4E-18 124.5 11.1 111 116-237 79-192 (297)
79 1jsx_A Glucose-inhibited divis 99.5 4.8E-14 1.7E-18 117.5 10.9 100 119-231 65-164 (207)
80 4htf_A S-adenosylmethionine-de 99.5 3.8E-14 1.3E-18 124.2 10.7 104 119-233 68-174 (285)
81 2nxc_A L11 mtase, ribosomal pr 99.5 3.9E-13 1.3E-17 116.3 16.9 102 118-234 119-220 (254)
82 2pbf_A Protein-L-isoaspartate 99.5 1.1E-13 3.6E-18 117.2 13.0 120 104-231 63-192 (227)
83 3gu3_A Methyltransferase; alph 99.5 2.4E-14 8E-19 125.7 9.2 108 116-235 19-129 (284)
84 2yxe_A Protein-L-isoaspartate 99.5 5.3E-14 1.8E-18 118.0 11.0 115 104-231 62-176 (215)
85 3g5t_A Trans-aconitate 3-methy 99.5 9.6E-14 3.3E-18 122.6 13.2 110 118-230 35-147 (299)
86 2b25_A Hypothetical protein; s 99.5 7.3E-14 2.5E-18 125.6 12.6 121 102-231 88-218 (336)
87 3fzg_A 16S rRNA methylase; met 99.5 2.6E-13 9E-18 111.4 14.6 157 105-281 34-196 (200)
88 3gjy_A Spermidine synthase; AP 99.5 6.5E-14 2.2E-18 124.5 11.9 104 121-233 91-201 (317)
89 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.1E-13 3.8E-18 119.1 13.0 118 102-232 79-198 (258)
90 1o54_A SAM-dependent O-methylt 99.5 9.5E-14 3.3E-18 121.4 12.7 119 102-232 95-213 (277)
91 2frn_A Hypothetical protein PH 99.5 2.1E-14 7E-19 126.0 8.2 105 118-235 124-228 (278)
92 3sso_A Methyltransferase; macr 99.5 3.3E-13 1.1E-17 122.9 16.2 150 118-282 215-392 (419)
93 1pjz_A Thiopurine S-methyltran 99.5 5.4E-14 1.8E-18 117.6 10.2 116 103-230 7-138 (203)
94 1zx0_A Guanidinoacetate N-meth 99.5 2.8E-14 9.4E-19 121.8 8.6 106 118-234 59-172 (236)
95 3kr9_A SAM-dependent methyltra 99.5 5E-14 1.7E-18 119.5 9.8 112 112-233 7-120 (225)
96 3ocj_A Putative exported prote 99.5 1.4E-14 4.9E-19 128.4 6.6 110 117-236 116-231 (305)
97 1vl5_A Unknown conserved prote 99.5 6.6E-14 2.3E-18 120.9 10.6 112 111-235 29-143 (260)
98 3ckk_A TRNA (guanine-N(7)-)-me 99.5 9.9E-14 3.4E-18 118.8 11.4 105 119-231 46-167 (235)
99 1xxl_A YCGJ protein; structura 99.5 1.2E-13 4.2E-18 118.0 11.9 118 106-236 8-128 (239)
100 3dtn_A Putative methyltransfer 99.5 3E-14 1E-18 121.0 8.0 107 117-237 42-153 (234)
101 1i9g_A Hypothetical protein RV 99.5 1.1E-13 3.6E-18 120.9 11.7 122 100-232 80-203 (280)
102 1u2z_A Histone-lysine N-methyl 99.5 3.5E-13 1.2E-17 124.8 15.4 125 105-238 228-365 (433)
103 2i7c_A Spermidine synthase; tr 99.5 3.9E-13 1.3E-17 118.2 15.1 106 118-232 77-192 (283)
104 3mgg_A Methyltransferase; NYSG 99.5 6.2E-14 2.1E-18 122.1 9.9 108 117-235 35-145 (276)
105 2frx_A Hypothetical protein YE 99.5 4.1E-13 1.4E-17 126.3 15.9 127 100-235 96-249 (479)
106 3vc1_A Geranyl diphosphate 2-C 99.5 6.2E-14 2.1E-18 124.7 9.5 110 117-237 115-226 (312)
107 4df3_A Fibrillarin-like rRNA/T 99.5 6.1E-14 2.1E-18 119.6 8.9 106 117-231 75-181 (233)
108 3ujc_A Phosphoethanolamine N-m 99.5 6E-14 2.1E-18 121.0 8.7 107 117-237 53-164 (266)
109 4dcm_A Ribosomal RNA large sub 99.5 9.2E-14 3.2E-18 126.9 10.4 105 116-231 219-333 (375)
110 2gb4_A Thiopurine S-methyltran 99.5 2.1E-13 7.1E-18 118.0 12.0 119 102-231 51-190 (252)
111 3id6_C Fibrillarin-like rRNA/T 99.5 2.8E-13 9.6E-18 115.6 12.6 106 117-231 74-180 (232)
112 3htx_A HEN1; HEN1, small RNA m 99.5 9E-13 3.1E-17 128.8 17.6 157 108-275 710-900 (950)
113 1i1n_A Protein-L-isoaspartate 99.5 1.6E-13 5.6E-18 116.0 11.1 104 117-232 75-182 (226)
114 3bwc_A Spermidine synthase; SA 99.5 2.2E-13 7.5E-18 121.0 12.2 106 118-231 94-209 (304)
115 2b78_A Hypothetical protein SM 99.5 3.8E-13 1.3E-17 123.3 14.2 109 118-233 211-332 (385)
116 2xvm_A Tellurite resistance pr 99.5 2.6E-13 9E-18 111.9 11.9 106 113-232 26-136 (199)
117 3c0k_A UPF0064 protein YCCW; P 99.5 4E-13 1.4E-17 123.5 14.4 111 116-233 217-340 (396)
118 2yvl_A TRMI protein, hypotheti 99.5 2.7E-13 9.3E-18 116.0 12.3 117 102-232 74-190 (248)
119 1nt2_A Fibrillarin-like PRE-rR 99.5 1.7E-13 5.8E-18 115.3 10.7 104 118-231 56-160 (210)
120 2p7i_A Hypothetical protein; p 99.5 5E-14 1.7E-18 120.0 7.5 107 110-234 33-143 (250)
121 3bkx_A SAM-dependent methyltra 99.5 2.9E-13 1E-17 117.6 12.5 116 114-237 38-164 (275)
122 3uwp_A Histone-lysine N-methyl 99.5 5E-13 1.7E-17 122.1 14.3 120 111-238 165-294 (438)
123 1sqg_A SUN protein, FMU protei 99.5 1.5E-12 5.2E-17 120.9 17.7 159 102-281 229-426 (429)
124 3ofk_A Nodulation protein S; N 99.5 5.1E-14 1.8E-18 118.1 6.9 108 110-233 42-155 (216)
125 2vdv_E TRNA (guanine-N(7)-)-me 99.5 1.9E-13 6.5E-18 117.5 10.6 105 119-231 49-172 (246)
126 2yxl_A PH0851 protein, 450AA l 99.5 5.2E-13 1.8E-17 124.8 14.2 125 103-235 243-392 (450)
127 1jg1_A PIMT;, protein-L-isoasp 99.5 1.8E-13 6.3E-18 116.7 10.2 115 103-232 75-189 (235)
128 3k6r_A Putative transferase PH 99.5 2.4E-13 8.3E-18 119.0 11.1 104 117-233 123-226 (278)
129 3lcc_A Putative methyl chlorid 99.5 1.6E-13 5.4E-18 116.7 9.7 104 119-235 66-174 (235)
130 1g8a_A Fibrillarin-like PRE-rR 99.5 1.3E-13 4.4E-18 116.8 9.1 103 118-231 72-177 (227)
131 3lec_A NADB-rossmann superfami 99.5 9.6E-14 3.3E-18 118.0 8.1 105 119-233 21-126 (230)
132 3tma_A Methyltransferase; thum 99.5 4.4E-13 1.5E-17 121.4 12.9 120 102-231 186-316 (354)
133 3v97_A Ribosomal RNA large sub 99.5 6.1E-13 2.1E-17 130.5 14.6 116 113-238 533-663 (703)
134 1yb2_A Hypothetical protein TA 99.5 8.1E-14 2.8E-18 121.8 7.5 111 109-232 100-211 (275)
135 3m70_A Tellurite resistance pr 99.5 4.6E-13 1.6E-17 117.3 12.2 102 116-232 117-223 (286)
136 2ex4_A Adrenal gland protein A 99.4 1.1E-13 3.8E-18 118.2 7.6 105 119-235 79-188 (241)
137 1y8c_A S-adenosylmethionine-de 99.4 3.9E-13 1.3E-17 114.4 11.0 108 109-231 25-141 (246)
138 3gnl_A Uncharacterized protein 99.4 1.4E-13 4.7E-18 118.0 8.0 105 119-233 21-126 (244)
139 3mcz_A O-methyltransferase; ad 99.4 1.4E-12 4.9E-17 117.6 15.1 111 118-238 177-293 (352)
140 2as0_A Hypothetical protein PH 99.4 5.6E-13 1.9E-17 122.6 12.5 108 119-233 217-336 (396)
141 4fsd_A Arsenic methyltransfera 99.4 2.6E-13 8.9E-18 124.2 10.2 118 117-237 81-208 (383)
142 2p8j_A S-adenosylmethionine-de 99.4 2.3E-13 7.9E-18 113.3 9.0 115 107-234 11-130 (209)
143 3thr_A Glycine N-methyltransfe 99.4 4.4E-13 1.5E-17 117.6 11.3 119 105-232 43-175 (293)
144 4dmg_A Putative uncharacterize 99.4 1E-12 3.5E-17 120.6 14.0 102 119-233 214-327 (393)
145 1vbf_A 231AA long hypothetical 99.4 3.6E-13 1.2E-17 114.2 10.2 112 103-232 54-165 (231)
146 2kw5_A SLR1183 protein; struct 99.4 5.5E-13 1.9E-17 110.6 11.1 102 119-235 30-134 (202)
147 1fbn_A MJ fibrillarin homologu 99.4 2.4E-13 8.2E-18 115.6 9.0 104 118-231 73-177 (230)
148 3ou2_A SAM-dependent methyltra 99.4 4.7E-13 1.6E-17 111.9 10.6 109 109-235 36-149 (218)
149 1wxx_A TT1595, hypothetical pr 99.4 5.6E-13 1.9E-17 122.0 12.0 106 119-233 209-326 (382)
150 3hnr_A Probable methyltransfer 99.4 2.4E-13 8.2E-18 114.2 8.8 110 109-237 36-150 (220)
151 1wzn_A SAM-dependent methyltra 99.4 7.1E-13 2.4E-17 113.7 11.9 100 118-232 40-145 (252)
152 2ipx_A RRNA 2'-O-methyltransfe 99.4 4.9E-13 1.7E-17 113.8 10.1 103 118-231 76-181 (233)
153 2r3s_A Uncharacterized protein 99.4 4.8E-12 1.6E-16 113.2 17.0 108 118-237 164-276 (335)
154 3r0q_C Probable protein argini 99.4 5.2E-13 1.8E-17 122.0 10.7 106 116-234 60-171 (376)
155 1r18_A Protein-L-isoaspartate( 99.4 2.2E-13 7.7E-18 115.4 7.8 116 104-231 67-193 (227)
156 3dmg_A Probable ribosomal RNA 99.4 6.9E-13 2.4E-17 121.3 11.5 114 104-231 213-339 (381)
157 3q7e_A Protein arginine N-meth 99.4 5.2E-13 1.8E-17 120.8 10.5 106 116-233 63-174 (349)
158 3gwz_A MMCR; methyltransferase 99.4 1.5E-12 5.1E-17 118.6 13.2 109 117-238 200-313 (369)
159 2cmg_A Spermidine synthase; tr 99.4 6E-14 2.1E-18 122.1 3.6 96 119-231 72-170 (262)
160 1ve3_A Hypothetical protein PH 99.4 4.4E-13 1.5E-17 112.9 8.8 102 119-234 38-144 (227)
161 1ri5_A MRNA capping enzyme; me 99.4 9.1E-13 3.1E-17 115.5 11.1 105 118-232 63-174 (298)
162 3g5l_A Putative S-adenosylmeth 99.4 4E-13 1.4E-17 115.4 8.2 99 118-231 43-144 (253)
163 1o9g_A RRNA methyltransferase; 99.4 2.3E-13 7.9E-18 117.1 6.7 109 119-232 51-214 (250)
164 1x19_A CRTF-related protein; m 99.4 3E-12 1E-16 116.0 14.3 108 116-236 187-299 (359)
165 2p35_A Trans-aconitate 2-methy 99.4 2.5E-13 8.7E-18 116.8 6.8 99 118-233 32-133 (259)
166 2qe6_A Uncharacterized protein 99.4 3.6E-12 1.2E-16 111.5 14.1 110 119-235 77-199 (274)
167 2fyt_A Protein arginine N-meth 99.4 1E-12 3.4E-17 118.5 10.8 104 115-230 60-169 (340)
168 3dp7_A SAM-dependent methyltra 99.4 2.8E-12 9.5E-17 116.5 13.7 110 118-238 178-293 (363)
169 3h2b_A SAM-dependent methyltra 99.4 1.1E-12 3.8E-17 108.8 10.2 110 107-235 30-144 (203)
170 4hg2_A Methyltransferase type 99.4 4E-13 1.4E-17 116.5 7.7 95 119-232 39-135 (257)
171 3i53_A O-methyltransferase; CO 99.4 1.2E-12 4E-17 117.4 10.9 107 119-238 169-280 (332)
172 3dli_A Methyltransferase; PSI- 99.4 6.4E-13 2.2E-17 113.4 8.6 99 117-234 39-142 (240)
173 3pfg_A N-methyltransferase; N, 99.4 1.1E-12 3.8E-17 113.4 10.0 98 119-235 50-154 (263)
174 2dul_A N(2),N(2)-dimethylguano 99.4 4.1E-12 1.4E-16 116.0 14.2 103 119-232 47-164 (378)
175 4hc4_A Protein arginine N-meth 99.4 1.4E-12 4.9E-17 118.7 11.0 105 116-233 80-190 (376)
176 2yqz_A Hypothetical protein TT 99.4 1.3E-12 4.6E-17 112.4 10.3 101 117-231 37-140 (263)
177 3e23_A Uncharacterized protein 99.4 8.1E-13 2.8E-17 110.4 8.6 98 117-234 41-143 (211)
178 1g6q_1 HnRNP arginine N-methyl 99.4 2.1E-12 7.2E-17 115.8 11.8 107 113-231 32-144 (328)
179 2y1w_A Histone-arginine methyl 99.4 1.7E-12 5.6E-17 117.4 11.0 104 115-231 46-154 (348)
180 1xtp_A LMAJ004091AAA; SGPP, st 99.4 6.2E-13 2.1E-17 114.0 7.6 102 118-233 92-198 (254)
181 3axs_A Probable N(2),N(2)-dime 99.4 1.3E-12 4.4E-17 119.6 9.9 106 118-232 51-158 (392)
182 2vdw_A Vaccinia virus capping 99.4 2.5E-12 8.4E-17 114.1 11.2 110 119-233 48-170 (302)
183 2h00_A Methyltransferase 10 do 99.4 4.1E-13 1.4E-17 115.7 6.0 98 105-204 46-149 (254)
184 2ip2_A Probable phenazine-spec 99.4 1.9E-12 6.5E-17 116.0 10.5 104 121-237 169-277 (334)
185 3ccf_A Cyclopropane-fatty-acyl 99.4 1.3E-12 4.3E-17 114.2 9.0 102 113-233 51-155 (279)
186 3g2m_A PCZA361.24; SAM-depende 99.4 5.1E-13 1.7E-17 117.9 6.6 103 119-234 82-192 (299)
187 3sm3_A SAM-dependent methyltra 99.4 9.3E-13 3.2E-17 111.3 8.0 104 118-233 29-142 (235)
188 3e8s_A Putative SAM dependent 99.4 2.6E-12 8.8E-17 107.8 10.5 108 111-233 44-153 (227)
189 1tw3_A COMT, carminomycin 4-O- 99.4 2.5E-12 8.4E-17 116.4 11.0 106 116-234 180-290 (360)
190 1qzz_A RDMB, aclacinomycin-10- 99.4 2E-12 6.8E-17 117.5 10.4 104 117-233 180-288 (374)
191 3p2e_A 16S rRNA methylase; met 99.4 5.3E-13 1.8E-17 113.5 6.0 103 118-230 23-137 (225)
192 2yx1_A Hypothetical protein MJ 99.4 3.3E-12 1.1E-16 114.9 11.3 101 118-235 194-294 (336)
193 3i9f_A Putative type 11 methyl 99.4 2.2E-12 7.7E-17 103.9 8.9 102 115-237 13-117 (170)
194 3q87_B N6 adenine specific DNA 99.3 6.5E-12 2.2E-16 101.9 11.6 104 103-232 6-123 (170)
195 3d2l_A SAM-dependent methyltra 99.3 2.6E-12 8.8E-17 109.3 9.6 97 119-231 33-136 (243)
196 2aot_A HMT, histamine N-methyl 99.3 2.6E-12 8.9E-17 113.1 9.9 109 118-231 51-171 (292)
197 3m33_A Uncharacterized protein 99.3 1.1E-12 3.8E-17 111.1 6.8 93 118-229 47-139 (226)
198 3bkw_A MLL3908 protein, S-aden 99.3 2E-12 6.8E-17 110.0 8.4 108 110-232 34-144 (243)
199 3ggd_A SAM-dependent methyltra 99.3 6.7E-12 2.3E-16 107.2 11.6 107 117-234 54-165 (245)
200 2pjd_A Ribosomal RNA small sub 99.3 1.9E-12 6.3E-17 116.8 8.5 107 111-231 188-302 (343)
201 3mq2_A 16S rRNA methyltransfer 99.3 9.7E-13 3.3E-17 110.6 6.1 104 116-231 24-139 (218)
202 2qfm_A Spermine synthase; sper 99.3 4.8E-12 1.7E-16 113.9 10.9 107 119-232 188-314 (364)
203 3giw_A Protein of unknown func 99.3 5.6E-12 1.9E-16 109.7 10.6 165 67-236 22-204 (277)
204 3ege_A Putative methyltransfer 99.3 1.3E-12 4.6E-17 113.0 6.6 110 104-233 19-131 (261)
205 1ej0_A FTSJ; methyltransferase 99.3 4.7E-12 1.6E-16 101.8 9.0 102 117-233 20-137 (180)
206 2jjq_A Uncharacterized RNA met 99.3 1.5E-11 5.2E-16 113.9 13.5 118 98-232 268-387 (425)
207 3tm4_A TRNA (guanine N2-)-meth 99.3 1.1E-11 3.9E-16 113.0 12.4 117 102-230 201-328 (373)
208 1wy7_A Hypothetical protein PH 99.3 4.9E-11 1.7E-15 99.2 15.2 111 103-231 30-148 (207)
209 3b3j_A Histone-arginine methyl 99.3 3.9E-12 1.3E-16 119.7 9.3 101 117-230 156-261 (480)
210 3l8d_A Methyltransferase; stru 99.3 3.3E-12 1.1E-16 108.6 7.9 101 118-234 52-155 (242)
211 3bzb_A Uncharacterized protein 99.3 1.6E-11 5.5E-16 107.6 12.5 108 118-230 78-203 (281)
212 3iv6_A Putative Zn-dependent a 99.3 4.7E-12 1.6E-16 109.9 8.8 106 111-231 37-147 (261)
213 2qm3_A Predicted methyltransfe 99.3 5.9E-12 2E-16 114.9 9.9 102 119-231 172-277 (373)
214 3bt7_A TRNA (uracil-5-)-methyl 99.3 2E-11 7E-16 111.1 13.4 124 98-231 189-325 (369)
215 2i62_A Nicotinamide N-methyltr 99.3 8.2E-13 2.8E-17 113.9 3.9 110 118-234 55-200 (265)
216 3bxo_A N,N-dimethyltransferase 99.3 7.4E-12 2.5E-16 106.2 9.6 99 118-235 39-144 (239)
217 3bgv_A MRNA CAP guanine-N7 met 99.3 1.2E-11 3.9E-16 109.9 11.0 108 119-233 34-156 (313)
218 3cgg_A SAM-dependent methyltra 99.3 1.2E-11 4.2E-16 101.1 10.0 106 108-233 37-148 (195)
219 2gs9_A Hypothetical protein TT 99.3 3.7E-12 1.3E-16 106.2 6.7 96 119-234 36-134 (211)
220 2b9e_A NOL1/NOP2/SUN domain fa 99.3 4.7E-11 1.6E-15 106.1 13.4 99 102-204 85-183 (309)
221 2a14_A Indolethylamine N-methy 99.3 1.2E-12 4.2E-17 113.6 3.0 113 118-234 54-199 (263)
222 2g72_A Phenylethanolamine N-me 99.2 8.8E-12 3E-16 109.4 7.5 111 119-234 71-217 (289)
223 2pxx_A Uncharacterized protein 99.2 4.4E-12 1.5E-16 105.6 5.3 102 118-233 41-160 (215)
224 1uwv_A 23S rRNA (uracil-5-)-me 99.2 5E-11 1.7E-15 110.8 12.7 104 118-231 285-388 (433)
225 3tos_A CALS11; methyltransfera 99.2 5.7E-11 1.9E-15 102.4 11.8 149 118-280 68-254 (257)
226 1ne2_A Hypothetical protein TA 99.2 8.1E-11 2.8E-15 97.4 12.3 92 118-231 50-146 (200)
227 2avn_A Ubiquinone/menaquinone 99.2 2E-11 6.8E-16 105.5 8.9 95 119-232 54-152 (260)
228 1zq9_A Probable dimethyladenos 99.2 5E-11 1.7E-15 104.8 11.4 97 101-208 10-106 (285)
229 2plw_A Ribosomal RNA methyltra 99.2 4.7E-11 1.6E-15 98.7 10.5 99 118-231 21-153 (201)
230 1p91_A Ribosomal RNA large sub 99.2 2.8E-11 9.7E-16 104.8 9.3 95 118-232 84-178 (269)
231 3lst_A CALO1 methyltransferase 99.2 1.1E-11 3.9E-16 111.8 6.9 106 117-238 182-292 (348)
232 4e2x_A TCAB9; kijanose, tetron 99.2 8.4E-12 2.9E-16 115.2 5.2 102 117-233 105-209 (416)
233 3dou_A Ribosomal RNA large sub 99.2 7.9E-11 2.7E-15 97.5 10.2 95 118-231 24-138 (191)
234 1af7_A Chemotaxis receptor met 99.2 4.4E-11 1.5E-15 104.5 8.5 106 119-232 105-252 (274)
235 3cc8_A Putative methyltransfer 99.2 1.2E-11 4.2E-16 103.9 4.6 98 118-233 31-131 (230)
236 2f8l_A Hypothetical protein LM 99.2 9.9E-11 3.4E-15 105.5 10.7 116 103-230 110-254 (344)
237 4a6d_A Hydroxyindole O-methylt 99.2 7.4E-10 2.5E-14 100.2 16.5 107 117-237 177-288 (353)
238 1vlm_A SAM-dependent methyltra 99.2 4.7E-11 1.6E-15 100.4 7.6 98 113-234 41-141 (219)
239 2qy6_A UPF0209 protein YFCK; s 99.2 6.6E-11 2.3E-15 102.4 8.6 108 119-230 60-211 (257)
240 2r6z_A UPF0341 protein in RSP 99.2 3.7E-11 1.3E-15 104.1 6.9 90 110-204 74-170 (258)
241 2h1r_A Dimethyladenosine trans 99.2 1.2E-10 4E-15 103.1 10.2 95 101-207 24-118 (299)
242 2nyu_A Putative ribosomal RNA 99.1 1.9E-10 6.5E-15 94.6 10.5 100 118-232 21-145 (196)
243 3hp7_A Hemolysin, putative; st 99.1 1.8E-11 6.1E-16 107.6 4.0 97 119-230 85-183 (291)
244 3opn_A Putative hemolysin; str 99.1 1.8E-11 6.2E-16 104.5 4.0 97 119-230 37-135 (232)
245 3lcv_B Sisomicin-gentamicin re 99.1 1.7E-10 5.7E-15 99.1 9.5 145 118-282 131-281 (281)
246 3o4f_A Spermidine synthase; am 99.1 1.4E-10 4.8E-15 101.7 8.7 106 117-231 81-197 (294)
247 1m6y_A S-adenosyl-methyltransf 99.1 4.5E-10 1.5E-14 99.4 12.0 88 115-206 22-109 (301)
248 3k0b_A Predicted N6-adenine-sp 99.1 2.1E-10 7.2E-15 105.2 9.8 119 102-230 184-348 (393)
249 2zfu_A Nucleomethylin, cerebra 99.1 2.5E-10 8.4E-15 95.4 8.8 95 108-233 56-152 (215)
250 3gru_A Dimethyladenosine trans 99.1 9.1E-10 3.1E-14 97.1 12.8 99 100-210 31-129 (295)
251 3ldg_A Putative uncharacterize 99.1 5.4E-10 1.9E-14 102.1 11.3 119 102-230 177-341 (384)
252 3ldu_A Putative methylase; str 99.1 2.7E-10 9.2E-15 104.3 8.8 118 103-230 179-342 (385)
253 2ih2_A Modification methylase 99.1 1.8E-10 6.1E-15 106.2 7.6 109 102-230 22-162 (421)
254 4azs_A Methyltransferase WBDD; 99.1 2.5E-10 8.4E-15 109.7 8.4 105 118-230 65-171 (569)
255 3reo_A (ISO)eugenol O-methyltr 99.0 2.6E-10 9E-15 103.7 7.4 100 118-238 202-306 (368)
256 3ll7_A Putative methyltransfer 99.0 3.7E-10 1.3E-14 103.7 8.4 78 119-204 93-172 (410)
257 3p9c_A Caffeic acid O-methyltr 99.0 4E-10 1.4E-14 102.4 8.5 101 117-238 199-304 (364)
258 3frh_A 16S rRNA methylase; met 99.0 4.9E-09 1.7E-13 89.1 14.5 101 115-232 101-206 (253)
259 1fp2_A Isoflavone O-methyltran 99.0 2.5E-10 8.4E-15 103.1 5.7 100 117-237 186-293 (352)
260 1fp1_D Isoliquiritigenin 2'-O- 99.0 2.1E-10 7.1E-15 104.4 4.9 99 118-237 208-311 (372)
261 2okc_A Type I restriction enzy 99.0 4.6E-10 1.6E-14 104.7 7.1 120 101-230 153-305 (445)
262 3tqs_A Ribosomal RNA small sub 99.0 2.2E-09 7.6E-14 92.7 9.4 97 100-206 10-107 (255)
263 2oyr_A UPF0341 protein YHIQ; a 98.9 5.7E-10 2E-14 96.5 5.3 88 110-205 77-174 (258)
264 3fut_A Dimethyladenosine trans 98.9 4E-09 1.4E-13 91.9 10.3 119 98-231 26-144 (271)
265 4fzv_A Putative methyltransfer 98.9 1.3E-08 4.5E-13 91.9 13.7 120 106-234 135-286 (359)
266 2ar0_A M.ecoki, type I restric 98.9 4E-09 1.4E-13 100.6 10.2 123 100-230 150-310 (541)
267 2wa2_A Non-structural protein 98.9 1.8E-10 6.1E-15 100.8 0.4 99 118-232 81-193 (276)
268 1qam_A ERMC' methyltransferase 98.9 5.8E-09 2E-13 89.4 9.8 76 102-183 13-88 (244)
269 1zg3_A Isoflavanone 4'-O-methy 98.9 2E-09 6.8E-14 97.3 7.0 100 117-237 191-298 (358)
270 2xyq_A Putative 2'-O-methyl tr 98.9 3.9E-09 1.3E-13 92.7 8.3 89 118-232 62-171 (290)
271 4gqb_A Protein arginine N-meth 98.9 8.4E-09 2.9E-13 99.3 10.9 101 120-231 358-466 (637)
272 2p41_A Type II methyltransfera 98.9 5.8E-10 2E-14 98.9 2.7 96 118-231 81-190 (305)
273 2oxt_A Nucleoside-2'-O-methylt 98.9 2.4E-10 8.1E-15 99.4 0.1 100 117-232 72-185 (265)
274 1yub_A Ermam, rRNA methyltrans 98.8 9.5E-11 3.3E-15 100.6 -3.5 114 102-230 12-143 (245)
275 3c6k_A Spermine synthase; sper 98.8 6.5E-09 2.2E-13 94.0 8.2 146 119-282 205-378 (381)
276 3v97_A Ribosomal RNA large sub 98.8 9.7E-09 3.3E-13 100.8 9.0 125 102-230 173-345 (703)
277 3ftd_A Dimethyladenosine trans 98.8 1.7E-08 5.7E-13 86.9 9.2 117 101-231 13-130 (249)
278 3uzu_A Ribosomal RNA small sub 98.8 1.5E-08 5E-13 88.7 8.2 79 100-183 23-102 (279)
279 3khk_A Type I restriction-modi 98.7 1.4E-08 4.7E-13 96.8 7.2 124 98-230 224-393 (544)
280 3ua3_A Protein arginine N-meth 98.7 7.1E-08 2.4E-12 93.1 10.0 107 120-231 410-533 (745)
281 1qyr_A KSGA, high level kasuga 98.7 5.6E-08 1.9E-12 83.7 8.1 100 103-210 5-105 (252)
282 3lkd_A Type I restriction-modi 98.6 1.3E-07 4.4E-12 90.0 10.8 126 98-230 196-356 (542)
283 3s1s_A Restriction endonucleas 98.6 4.4E-07 1.5E-11 88.9 14.0 150 79-238 273-469 (878)
284 1wg8_A Predicted S-adenosylmet 98.6 2.2E-07 7.5E-12 80.6 9.5 83 116-207 19-101 (285)
285 2ld4_A Anamorsin; methyltransf 98.6 2.1E-08 7.2E-13 81.0 2.5 90 117-234 10-103 (176)
286 2oo3_A Protein involved in cat 98.3 3.4E-07 1.2E-11 79.5 5.0 104 118-230 90-196 (283)
287 3tka_A Ribosomal RNA small sub 98.3 2.2E-06 7.4E-11 76.1 9.9 86 116-206 54-139 (347)
288 2k4m_A TR8_protein, UPF0146 pr 98.3 2.2E-06 7.4E-11 66.9 8.7 85 119-231 35-120 (153)
289 3ufb_A Type I restriction-modi 98.0 2.7E-05 9.1E-10 73.9 10.4 104 98-204 196-311 (530)
290 3evf_A RNA-directed RNA polyme 98.0 9.1E-06 3.1E-10 70.1 6.1 105 117-235 72-186 (277)
291 4auk_A Ribosomal RNA large sub 97.9 2.9E-05 9.9E-10 69.9 8.0 84 117-218 209-292 (375)
292 2px2_A Genome polyprotein [con 97.8 6.3E-06 2.2E-10 70.2 2.9 99 117-235 71-185 (269)
293 3gcz_A Polyprotein; flavivirus 97.8 4.8E-06 1.7E-10 71.9 1.5 102 117-231 88-200 (282)
294 1i4w_A Mitochondrial replicati 97.7 8.6E-05 2.9E-09 66.7 8.6 59 120-183 59-117 (353)
295 3p8z_A Mtase, non-structural p 97.6 0.00013 4.3E-09 61.4 7.4 106 116-237 75-190 (267)
296 2zig_A TTHA0409, putative modi 97.6 0.00026 8.9E-09 62.0 9.8 51 118-171 234-284 (297)
297 3lkz_A Non-structural protein 97.6 0.00016 5.3E-09 62.8 7.9 103 117-234 92-205 (321)
298 3eld_A Methyltransferase; flav 97.6 0.00058 2E-08 59.3 11.2 101 117-231 79-190 (300)
299 3pvc_A TRNA 5-methylaminomethy 97.5 0.00011 3.6E-09 72.0 6.1 110 119-232 58-211 (689)
300 3vyw_A MNMC2; tRNA wobble urid 97.5 0.00052 1.8E-08 60.3 9.5 136 120-281 97-259 (308)
301 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00036 1.2E-08 60.5 7.7 93 119-238 109-221 (344)
302 2py6_A Methyltransferase FKBM; 97.1 0.0012 4.2E-08 60.5 7.9 61 117-177 224-288 (409)
303 3b5i_A S-adenosyl-L-methionine 97.0 0.0037 1.2E-07 56.5 9.9 37 120-156 53-103 (374)
304 1g60_A Adenine-specific methyl 96.9 0.0019 6.7E-08 55.3 7.1 48 118-168 211-258 (260)
305 3ps9_A TRNA 5-methylaminomethy 96.9 0.0036 1.2E-07 60.8 9.7 108 121-232 68-219 (676)
306 3s2e_A Zinc-containing alcohol 96.8 0.0047 1.6E-07 54.7 9.0 101 116-233 163-264 (340)
307 2efj_A 3,7-dimethylxanthine me 96.8 0.0018 6.2E-08 58.7 6.3 77 120-202 53-156 (384)
308 1g55_A DNA cytosine methyltran 96.8 0.0019 6.4E-08 57.8 6.3 75 121-204 3-77 (343)
309 1f8f_A Benzyl alcohol dehydrog 96.7 0.0035 1.2E-07 56.3 7.8 102 116-233 187-290 (371)
310 3g7u_A Cytosine-specific methy 96.7 0.0061 2.1E-07 55.2 8.9 101 121-234 3-121 (376)
311 2dph_A Formaldehyde dismutase; 96.6 0.0046 1.6E-07 56.2 8.0 107 114-233 180-300 (398)
312 1pqw_A Polyketide synthase; ro 96.6 0.0026 8.9E-08 51.7 5.8 100 116-231 35-136 (198)
313 1pl8_A Human sorbitol dehydrog 96.6 0.011 3.7E-07 52.7 10.3 103 114-232 166-273 (356)
314 2vz8_A Fatty acid synthase; tr 96.5 0.0014 4.8E-08 72.5 4.3 103 119-233 1240-1349(2512)
315 1m6e_X S-adenosyl-L-methionnin 96.5 0.0006 2E-08 61.3 0.7 80 120-202 52-146 (359)
316 2c7p_A Modification methylase 96.4 0.012 4.2E-07 52.1 8.6 95 120-234 11-122 (327)
317 3m6i_A L-arabinitol 4-dehydrog 96.3 0.023 7.9E-07 50.7 10.1 106 114-232 174-283 (363)
318 4ej6_A Putative zinc-binding d 96.2 0.0087 3E-07 53.8 7.1 106 113-233 176-285 (370)
319 2uyo_A Hypothetical protein ML 96.2 0.11 3.9E-06 45.5 14.0 110 119-234 102-220 (310)
320 1e3j_A NADP(H)-dependent ketos 96.2 0.034 1.2E-06 49.4 10.8 107 114-232 163-271 (352)
321 2c0c_A Zinc binding alcohol de 96.2 0.017 5.9E-07 51.6 8.7 101 114-231 158-260 (362)
322 1cdo_A Alcohol dehydrogenase; 96.2 0.023 7.9E-07 50.9 9.5 98 116-232 189-294 (374)
323 1e3i_A Alcohol dehydrogenase, 96.1 0.024 8.3E-07 50.8 9.3 102 116-233 192-298 (376)
324 1kol_A Formaldehyde dehydrogen 96.1 0.031 1.1E-06 50.5 10.0 107 115-233 181-301 (398)
325 1uuf_A YAHK, zinc-type alcohol 96.1 0.056 1.9E-06 48.4 11.7 96 116-231 191-287 (369)
326 3jv7_A ADH-A; dehydrogenase, n 96.1 0.018 6.3E-07 51.0 8.3 103 116-233 168-271 (345)
327 1rjd_A PPM1P, carboxy methyl t 96.0 0.087 3E-06 46.7 12.6 116 112-233 90-234 (334)
328 1v3u_A Leukotriene B4 12- hydr 96.0 0.011 3.7E-07 52.2 6.6 97 116-231 142-243 (333)
329 1p0f_A NADP-dependent alcohol 96.0 0.02 6.9E-07 51.3 8.5 98 116-232 188-293 (373)
330 3fpc_A NADP-dependent alcohol 96.0 0.022 7.4E-07 50.7 8.6 106 113-233 160-267 (352)
331 4b7c_A Probable oxidoreductase 96.0 0.0097 3.3E-07 52.5 6.2 102 115-232 145-248 (336)
332 3gms_A Putative NADPH:quinone 96.0 0.0076 2.6E-07 53.4 5.5 103 115-233 140-244 (340)
333 2jhf_A Alcohol dehydrogenase E 96.0 0.029 1E-06 50.2 9.3 99 116-233 188-294 (374)
334 3uog_A Alcohol dehydrogenase; 96.0 0.011 3.7E-07 52.9 6.4 103 115-233 185-288 (363)
335 4a2c_A Galactitol-1-phosphate 95.9 0.085 2.9E-06 46.5 11.9 108 114-235 155-263 (346)
336 4eez_A Alcohol dehydrogenase 1 95.9 0.074 2.5E-06 46.9 11.4 105 115-233 159-264 (348)
337 3ip1_A Alcohol dehydrogenase, 95.9 0.035 1.2E-06 50.4 9.4 106 117-233 211-319 (404)
338 4eye_A Probable oxidoreductase 95.9 0.018 6.2E-07 51.0 7.3 100 116-232 156-257 (342)
339 3qwb_A Probable quinone oxidor 95.8 0.013 4.4E-07 51.7 6.1 101 116-232 145-247 (334)
340 2fzw_A Alcohol dehydrogenase c 95.8 0.031 1.1E-06 50.0 8.7 98 116-232 187-292 (373)
341 3uko_A Alcohol dehydrogenase c 95.7 0.021 7.3E-07 51.3 7.1 104 116-234 190-297 (378)
342 3iht_A S-adenosyl-L-methionine 95.7 0.06 2.1E-06 42.1 8.5 103 120-235 41-150 (174)
343 1wly_A CAAR, 2-haloacrylate re 95.6 0.023 7.9E-07 50.0 6.9 100 116-231 142-243 (333)
344 2hcy_A Alcohol dehydrogenase 1 95.6 0.036 1.2E-06 49.1 8.1 100 116-233 166-270 (347)
345 3jyn_A Quinone oxidoreductase; 95.6 0.015 5.1E-07 51.1 5.5 102 116-233 137-240 (325)
346 1rjw_A ADH-HT, alcohol dehydro 95.5 0.056 1.9E-06 47.7 9.1 100 116-232 161-261 (339)
347 4dup_A Quinone oxidoreductase; 95.5 0.022 7.7E-07 50.7 6.5 101 116-233 164-266 (353)
348 3qv2_A 5-cytosine DNA methyltr 95.4 0.044 1.5E-06 48.5 8.1 103 120-234 10-132 (327)
349 3two_A Mannitol dehydrogenase; 95.4 0.083 2.8E-06 46.7 9.9 92 116-232 173-265 (348)
350 2j3h_A NADP-dependent oxidored 95.4 0.017 5.9E-07 51.0 5.4 98 116-231 152-254 (345)
351 1qor_A Quinone oxidoreductase; 95.4 0.017 6E-07 50.7 5.3 101 116-232 137-239 (327)
352 3ubt_Y Modification methylase 95.3 0.035 1.2E-06 48.8 7.2 97 122-234 2-112 (331)
353 2eih_A Alcohol dehydrogenase; 95.3 0.041 1.4E-06 48.6 7.4 101 116-232 163-265 (343)
354 1vj0_A Alcohol dehydrogenase, 95.2 0.14 4.9E-06 45.8 10.9 102 117-232 193-298 (380)
355 4h0n_A DNMT2; SAH binding, tra 95.1 0.035 1.2E-06 49.2 6.5 104 121-234 4-121 (333)
356 2zb4_A Prostaglandin reductase 95.1 0.04 1.4E-06 48.9 6.9 102 115-232 154-260 (357)
357 2h6e_A ADH-4, D-arabinose 1-de 95.1 0.03 1E-06 49.5 6.0 100 116-232 168-269 (344)
358 1jvb_A NAD(H)-dependent alcoho 95.1 0.049 1.7E-06 48.2 7.4 101 115-232 166-271 (347)
359 2qrv_A DNA (cytosine-5)-methyl 95.1 0.042 1.4E-06 47.9 6.7 76 119-203 15-91 (295)
360 1g60_A Adenine-specific methyl 95.1 0.018 6.3E-07 49.1 4.3 52 173-231 5-73 (260)
361 1yb5_A Quinone oxidoreductase; 95.1 0.039 1.3E-06 49.1 6.7 101 116-232 167-269 (351)
362 1piw_A Hypothetical zinc-type 95.0 0.071 2.4E-06 47.5 8.1 97 115-231 175-275 (360)
363 1boo_A Protein (N-4 cytosine-s 94.9 0.022 7.6E-07 50.2 4.4 54 171-231 13-83 (323)
364 4dvj_A Putative zinc-dependent 94.9 0.11 3.7E-06 46.4 9.0 97 119-231 171-269 (363)
365 1iz0_A Quinone oxidoreductase; 94.7 0.13 4.3E-06 44.5 8.9 92 117-231 123-217 (302)
366 2b5w_A Glucose dehydrogenase; 94.7 0.092 3.2E-06 46.6 8.2 99 115-232 162-273 (357)
367 1eg2_A Modification methylase 94.6 0.036 1.2E-06 48.8 5.2 54 171-231 37-105 (319)
368 2d8a_A PH0655, probable L-thre 94.6 0.091 3.1E-06 46.5 7.7 98 119-231 167-266 (348)
369 3gaz_A Alcohol dehydrogenase s 94.6 0.1 3.6E-06 46.1 8.0 97 116-231 147-245 (343)
370 2j8z_A Quinone oxidoreductase; 94.5 0.074 2.5E-06 47.3 6.9 101 116-232 159-261 (354)
371 2zig_A TTHA0409, putative modi 94.3 0.038 1.3E-06 48.1 4.5 53 172-231 21-96 (297)
372 3fbg_A Putative arginate lyase 94.3 0.13 4.5E-06 45.4 8.1 95 119-230 150-246 (346)
373 3gqv_A Enoyl reductase; medium 94.1 0.27 9.2E-06 43.9 9.9 98 118-232 163-263 (371)
374 3fwz_A Inner membrane protein 93.9 0.2 6.7E-06 38.1 7.4 93 121-230 8-103 (140)
375 4a0s_A Octenoyl-COA reductase/ 93.8 0.2 6.8E-06 45.9 8.6 101 115-232 216-336 (447)
376 1eg2_A Modification methylase 93.6 0.22 7.6E-06 43.7 8.2 56 110-168 231-291 (319)
377 3krt_A Crotonyl COA reductase; 93.5 0.14 4.7E-06 47.2 6.9 101 116-232 225-344 (456)
378 1boo_A Protein (N-4 cytosine-s 93.5 0.093 3.2E-06 46.2 5.5 61 117-182 250-310 (323)
379 2dq4_A L-threonine 3-dehydroge 93.4 0.065 2.2E-06 47.4 4.4 93 119-231 164-261 (343)
380 1yqd_A Sinapyl alcohol dehydro 93.1 0.33 1.1E-05 43.2 8.6 94 119-231 187-281 (366)
381 3me5_A Cytosine-specific methy 93.1 0.23 7.8E-06 46.3 7.7 59 120-184 88-147 (482)
382 1xa0_A Putative NADPH dependen 92.9 0.084 2.9E-06 46.2 4.3 96 118-232 147-246 (328)
383 1gu7_A Enoyl-[acyl-carrier-pro 92.6 0.49 1.7E-05 41.9 8.9 107 116-232 163-275 (364)
384 1lss_A TRK system potassium up 92.5 1.3 4.3E-05 32.8 10.0 95 121-229 5-100 (140)
385 2cf5_A Atccad5, CAD, cinnamyl 92.3 0.32 1.1E-05 43.1 7.4 98 116-232 176-275 (357)
386 4dcm_A Ribosomal RNA large sub 92.3 0.59 2E-05 41.9 9.1 94 120-231 39-135 (375)
387 3ic5_A Putative saccharopine d 92.2 1.4 4.9E-05 31.4 9.7 74 120-208 5-82 (118)
388 4f3n_A Uncharacterized ACR, CO 91.9 0.27 9.3E-06 45.0 6.3 49 118-166 136-188 (432)
389 3llv_A Exopolyphosphatase-rela 91.8 0.66 2.2E-05 34.9 7.7 72 121-204 7-79 (141)
390 3goh_A Alcohol dehydrogenase, 91.7 0.14 4.8E-06 44.5 4.2 89 116-231 139-228 (315)
391 3nx4_A Putative oxidoreductase 91.7 0.14 4.7E-06 44.7 4.1 91 122-232 149-241 (324)
392 4a27_A Synaptic vesicle membra 91.6 0.17 5.9E-06 44.7 4.7 99 115-232 138-238 (349)
393 1pjc_A Protein (L-alanine dehy 91.5 0.6 2.1E-05 41.6 8.2 96 119-230 166-265 (361)
394 2cdc_A Glucose dehydrogenase g 91.1 0.42 1.4E-05 42.4 6.8 94 120-233 181-279 (366)
395 2aef_A Calcium-gated potassium 91.0 2.2 7.6E-05 34.9 10.8 96 120-231 9-104 (234)
396 2vhw_A Alanine dehydrogenase; 90.8 0.6 2E-05 41.9 7.5 98 118-231 166-267 (377)
397 3pi7_A NADH oxidoreductase; gr 90.6 0.66 2.3E-05 40.8 7.5 97 121-233 166-264 (349)
398 3c85_A Putative glutathione-re 90.5 1.4 5E-05 34.6 8.8 97 120-231 39-138 (183)
399 4fs3_A Enoyl-[acyl-carrier-pro 90.4 3.4 0.00012 34.5 11.6 83 119-204 5-95 (256)
400 3grk_A Enoyl-(acyl-carrier-pro 90.3 4.1 0.00014 34.7 12.2 84 118-204 29-118 (293)
401 2eez_A Alanine dehydrogenase; 90.1 1.3 4.3E-05 39.6 9.0 99 118-232 164-266 (369)
402 1id1_A Putative potassium chan 90.0 2.2 7.5E-05 32.4 9.3 96 121-230 4-103 (153)
403 3k31_A Enoyl-(acyl-carrier-pro 89.5 3.6 0.00012 35.1 11.2 83 119-204 29-117 (296)
404 2g1u_A Hypothetical protein TM 89.5 1.6 5.5E-05 33.4 8.1 99 118-230 17-116 (155)
405 4ft4_B DNA (cytosine-5)-methyl 89.2 1.6 5.5E-05 43.0 9.7 59 119-183 211-273 (784)
406 3l4b_C TRKA K+ channel protien 89.2 1.2 4.2E-05 36.2 7.6 93 122-230 2-97 (218)
407 2vn8_A Reticulon-4-interacting 89.1 0.73 2.5E-05 41.0 6.6 97 117-231 181-279 (375)
408 1l7d_A Nicotinamide nucleotide 88.8 0.83 2.9E-05 41.0 6.8 42 119-162 171-213 (384)
409 3tqh_A Quinone oxidoreductase; 88.7 0.98 3.4E-05 39.2 7.0 97 113-231 146-244 (321)
410 1lnq_A MTHK channels, potassiu 88.7 2 6.8E-05 37.5 9.0 96 120-231 115-210 (336)
411 1tt7_A YHFP; alcohol dehydroge 88.3 0.12 4.1E-06 45.3 0.8 97 118-232 148-247 (330)
412 3ioy_A Short-chain dehydrogena 88.2 2.8 9.7E-05 36.3 9.7 85 119-204 7-96 (319)
413 1zkd_A DUF185; NESG, RPR58, st 88.0 0.95 3.2E-05 40.8 6.5 53 121-176 82-140 (387)
414 3dqp_A Oxidoreductase YLBE; al 87.7 6.8 0.00023 31.3 11.3 70 122-204 2-72 (219)
415 3p2y_A Alanine dehydrogenase/p 87.5 0.96 3.3E-05 40.7 6.2 42 119-162 183-225 (381)
416 4ezb_A Uncharacterized conserv 87.4 5.1 0.00018 34.7 10.9 89 121-230 25-119 (317)
417 4fgs_A Probable dehydrogenase 87.4 3.1 0.00011 35.5 9.2 82 117-204 26-112 (273)
418 3oig_A Enoyl-[acyl-carrier-pro 87.4 6.6 0.00023 32.6 11.3 85 119-204 6-96 (266)
419 3e8x_A Putative NAD-dependent 87.3 10 0.00035 30.6 12.7 72 119-204 20-93 (236)
420 3ggo_A Prephenate dehydrogenas 87.2 2 6.7E-05 37.4 8.0 90 121-231 34-126 (314)
421 3l9w_A Glutathione-regulated p 86.7 1.4 4.6E-05 40.1 6.9 95 121-230 5-100 (413)
422 1zsy_A Mitochondrial 2-enoyl t 86.7 1.1 3.8E-05 39.5 6.2 101 116-231 164-269 (357)
423 3abi_A Putative uncharacterize 86.2 4.5 0.00015 35.7 10.0 81 120-216 16-98 (365)
424 4fn4_A Short chain dehydrogena 85.9 3.8 0.00013 34.5 8.9 84 118-204 5-93 (254)
425 3t4x_A Oxidoreductase, short c 85.8 3.7 0.00013 34.3 8.9 83 119-204 9-94 (267)
426 3iup_A Putative NADPH:quinone 85.7 1 3.5E-05 40.2 5.5 79 118-205 169-250 (379)
427 2g5c_A Prephenate dehydrogenas 85.7 4 0.00014 34.4 9.0 88 122-230 3-94 (281)
428 3h2s_A Putative NADH-flavin re 85.5 4.8 0.00017 32.2 9.2 70 122-205 2-72 (224)
429 3pxx_A Carveol dehydrogenase; 85.2 8.3 0.00028 32.2 10.8 83 119-204 9-108 (287)
430 1fmc_A 7 alpha-hydroxysteroid 84.7 4.3 0.00015 33.3 8.7 83 119-204 10-97 (255)
431 4a7p_A UDP-glucose dehydrogena 84.4 6.2 0.00021 36.1 10.2 105 119-238 7-135 (446)
432 1x13_A NAD(P) transhydrogenase 84.3 1.4 4.7E-05 39.9 5.7 42 118-161 170-212 (401)
433 4dio_A NAD(P) transhydrogenase 84.3 1.4 4.8E-05 39.9 5.7 42 119-162 189-231 (405)
434 1wma_A Carbonyl reductase [NAD 84.3 2.8 9.5E-05 34.7 7.3 83 119-204 3-91 (276)
435 3ijr_A Oxidoreductase, short c 84.1 14 0.00047 31.3 11.8 83 119-204 46-134 (291)
436 3pid_A UDP-glucose 6-dehydroge 84.1 10 0.00034 34.6 11.3 106 118-238 34-159 (432)
437 3t8y_A CHEB, chemotaxis respon 84.0 5.2 0.00018 30.4 8.3 97 127-232 8-106 (164)
438 4g81_D Putative hexonate dehyd 83.9 6.7 0.00023 33.0 9.5 81 119-204 8-95 (255)
439 1xg5_A ARPG836; short chain de 83.9 4.1 0.00014 34.2 8.3 85 119-204 31-120 (279)
440 3ek2_A Enoyl-(acyl-carrier-pro 83.9 4.5 0.00015 33.6 8.5 84 118-204 12-101 (271)
441 4eso_A Putative oxidoreductase 83.8 8.1 0.00028 32.0 10.0 80 119-204 7-91 (255)
442 4e21_A 6-phosphogluconate dehy 83.6 9.3 0.00032 33.8 10.7 90 120-229 22-112 (358)
443 3nzo_A UDP-N-acetylglucosamine 83.5 9.4 0.00032 34.0 10.9 83 118-204 33-121 (399)
444 3ucx_A Short chain dehydrogena 83.5 7.5 0.00026 32.3 9.7 82 118-204 9-97 (264)
445 4ina_A Saccharopine dehydrogen 83.3 6.6 0.00023 35.3 9.8 89 121-215 2-96 (405)
446 3ce6_A Adenosylhomocysteinase; 83.2 2.5 8.4E-05 39.4 7.0 88 117-230 271-359 (494)
447 3iei_A Leucine carboxyl methyl 83.2 23 0.00077 31.0 12.9 119 111-233 81-231 (334)
448 1h2b_A Alcohol dehydrogenase; 83.1 2.6 8.8E-05 37.1 6.9 101 115-232 182-285 (359)
449 1jw9_B Molybdopterin biosynthe 82.6 8.6 0.00029 32.0 9.7 77 121-204 32-130 (249)
450 3oj0_A Glutr, glutamyl-tRNA re 82.6 12 0.00039 28.0 9.6 41 118-160 19-60 (144)
451 3h7a_A Short chain dehydrogena 82.6 4.5 0.00015 33.5 7.9 83 119-204 6-92 (252)
452 3k96_A Glycerol-3-phosphate de 82.6 3.2 0.00011 36.8 7.2 94 121-229 30-130 (356)
453 2vz8_A Fatty acid synthase; tr 82.5 2.4 8.1E-05 47.3 7.5 103 116-230 1664-1768(2512)
454 3r6d_A NAD-dependent epimerase 82.4 4.3 0.00015 32.6 7.6 74 121-206 6-84 (221)
455 3o38_A Short chain dehydrogena 82.4 5.5 0.00019 33.1 8.4 84 119-204 21-110 (266)
456 3lyl_A 3-oxoacyl-(acyl-carrier 82.3 8.6 0.00029 31.4 9.5 81 119-204 4-91 (247)
457 2y0c_A BCEC, UDP-glucose dehyd 82.2 4.7 0.00016 37.3 8.5 105 119-238 7-134 (478)
458 4g65_A TRK system potassium up 82.1 2.9 9.8E-05 38.5 7.0 71 121-204 4-77 (461)
459 3lf2_A Short chain oxidoreduct 81.9 7 0.00024 32.6 8.9 85 119-204 7-96 (265)
460 3o26_A Salutaridine reductase; 81.8 4.7 0.00016 34.0 7.9 85 119-205 11-101 (311)
461 3ojo_A CAP5O; rossmann fold, c 81.5 7.8 0.00027 35.3 9.5 106 120-238 11-135 (431)
462 3nyw_A Putative oxidoreductase 81.3 6.2 0.00021 32.6 8.3 85 119-204 6-96 (250)
463 3ruf_A WBGU; rossmann fold, UD 81.2 5.8 0.0002 34.2 8.4 80 119-204 24-109 (351)
464 3tjr_A Short chain dehydrogena 81.1 6.7 0.00023 33.5 8.7 83 119-204 30-117 (301)
465 3edm_A Short chain dehydrogena 80.8 10 0.00034 31.4 9.5 83 119-204 7-95 (259)
466 3sju_A Keto reductase; short-c 80.7 6.3 0.00021 33.2 8.2 83 119-204 23-110 (279)
467 3svt_A Short-chain type dehydr 80.7 6.8 0.00023 32.9 8.5 85 119-204 10-100 (281)
468 3f1l_A Uncharacterized oxidore 80.3 8.2 0.00028 31.8 8.7 84 119-204 11-101 (252)
469 4g65_A TRK system potassium up 80.3 10 0.00036 34.7 10.1 78 119-206 234-311 (461)
470 1iy8_A Levodione reductase; ox 79.7 9.2 0.00031 31.8 8.9 85 119-204 12-101 (267)
471 3qiv_A Short-chain dehydrogena 79.7 7.5 0.00026 31.9 8.3 83 119-204 8-95 (253)
472 1bg6_A N-(1-D-carboxylethyl)-L 79.4 6.4 0.00022 34.2 8.1 97 121-231 5-108 (359)
473 3i1j_A Oxidoreductase, short c 79.2 8 0.00027 31.5 8.3 84 119-204 13-103 (247)
474 3v2g_A 3-oxoacyl-[acyl-carrier 78.7 27 0.00094 29.0 11.7 83 119-204 30-118 (271)
475 3v8b_A Putative dehydrogenase, 78.7 7.1 0.00024 33.0 7.9 83 119-204 27-114 (283)
476 3hzh_A Chemotaxis response reg 78.6 15 0.00053 27.2 9.2 78 145-232 37-119 (157)
477 3r1i_A Short-chain type dehydr 78.5 7.8 0.00027 32.6 8.1 83 119-204 31-118 (276)
478 2yut_A Putative short-chain ox 78.4 6.9 0.00024 30.8 7.4 72 122-204 2-75 (207)
479 3swr_A DNA (cytosine-5)-methyl 78.4 6.9 0.00023 39.7 8.7 76 120-204 540-627 (1002)
480 3trk_A Nonstructural polyprote 78.3 1.6 5.6E-05 37.1 3.5 45 194-238 210-265 (324)
481 3vtf_A UDP-glucose 6-dehydroge 78.1 4.5 0.00015 37.1 6.8 39 121-161 22-61 (444)
482 2gn4_A FLAA1 protein, UDP-GLCN 78.1 6 0.0002 34.5 7.5 78 118-205 19-101 (344)
483 3rkr_A Short chain oxidoreduct 77.9 7.3 0.00025 32.3 7.7 83 119-204 28-115 (262)
484 3gg2_A Sugar dehydrogenase, UD 77.8 12 0.00043 34.1 9.8 102 122-238 4-128 (450)
485 1yb1_A 17-beta-hydroxysteroid 77.8 14 0.00047 30.8 9.4 83 119-204 30-117 (272)
486 3rku_A Oxidoreductase YMR226C; 77.7 8.7 0.0003 32.6 8.3 85 119-204 32-124 (287)
487 3qha_A Putative oxidoreductase 77.7 4.1 0.00014 34.8 6.2 86 121-230 16-103 (296)
488 3gaf_A 7-alpha-hydroxysteroid 77.7 7.5 0.00026 32.2 7.7 83 119-204 11-98 (256)
489 3qvo_A NMRA family protein; st 77.7 7.7 0.00026 31.5 7.7 74 121-208 24-101 (236)
490 2hmt_A YUAA protein; RCK, KTN, 77.3 6.5 0.00022 28.8 6.5 74 120-205 6-80 (144)
491 1jay_A Coenzyme F420H2:NADP+ o 77.1 11 0.00039 29.9 8.4 95 122-233 2-97 (212)
492 3d4o_A Dipicolinate synthase s 77.0 20 0.00067 30.5 10.3 88 118-229 153-241 (293)
493 3r3s_A Oxidoreductase; structu 77.0 18 0.00061 30.6 10.0 83 119-204 48-137 (294)
494 3gt0_A Pyrroline-5-carboxylate 77.0 1 3.4E-05 37.6 1.9 86 122-229 4-94 (247)
495 3rih_A Short chain dehydrogena 76.9 8.5 0.00029 32.8 8.0 84 119-204 40-128 (293)
496 3pk0_A Short-chain dehydrogena 76.7 8.6 0.00029 31.9 7.8 84 119-204 9-97 (262)
497 2rir_A Dipicolinate synthase, 76.4 22 0.00076 30.2 10.5 88 118-229 155-243 (300)
498 3eul_A Possible nitrate/nitrit 76.4 16 0.00054 26.9 8.6 80 144-232 15-97 (152)
499 3tfo_A Putative 3-oxoacyl-(acy 76.4 8.6 0.00029 32.2 7.7 83 119-204 3-90 (264)
500 1ae1_A Tropinone reductase-I; 76.2 14 0.00048 30.8 9.1 83 119-204 20-108 (273)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.2e-36 Score=261.59 Aligned_cols=216 Identities=39% Similarity=0.706 Sum_probs=196.5
Q ss_pred ccCCCChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCC
Q 023411 64 QVISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLP 142 (282)
Q Consensus 64 ~~~~~~~~l~~y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~ 142 (282)
..+.+++.+.+|+.++. .+++.+.++++++...+.+.+.+.+..+.++..++...++++|||||||+|++++++++.++
T Consensus 4 ~~~~~~~~~~~Y~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~ 83 (242)
T 3r3h_A 4 KHLSLTPELYKYLLDISLREHPALAALRKETSTMELANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALP 83 (242)
T ss_dssp CCCCCCHHHHHHHHHHHCCCCHHHHHHHHTTSSSGGGGTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSC
T ss_pred CcccCCHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCC
Confidence 44567899999999975 56789999999887776667889999999999999999999999999999999999999987
Q ss_pred CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCC
Q 023411 143 ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQI 222 (282)
Q Consensus 143 ~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~L 222 (282)
++++|+++|+++++++.|+++++.+|+.++++++++|+.+.++.+...++.++||+||+|++...+..+++.+.++ |
T Consensus 84 ~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~---L 160 (242)
T 3r3h_A 84 DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKL---V 160 (242)
T ss_dssp TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHH---E
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHh---c
Confidence 6899999999999999999999999998899999999998877654322237899999999998899999999999 9
Q ss_pred CCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 223 RVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 223 kpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
+|||+|+++|++|+|.+.++...+..+.++++|++.+.++++++++++|++||+.+|+|+
T Consensus 161 kpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 220 (242)
T 3r3h_A 161 TPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAIADGMFLVQPI 220 (242)
T ss_dssp EEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESSSSCEEEEEEC
T ss_pred CCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEccCceEEEEEc
Confidence 999999999999999999988888889999999999999999999999999999999986
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.6e-35 Score=251.50 Aligned_cols=204 Identities=22% Similarity=0.323 Sum_probs=186.8
Q ss_pred ChhHHHHHHhccCChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCC---EEEEEcccccHHHHHHHHHCCCCC
Q 023411 69 TPPLYDYILRNVREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQ---RCIEVGVYTGYSSLAIALVLPESG 145 (282)
Q Consensus 69 ~~~l~~y~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~---~VLEIG~G~G~~t~~la~~~~~~~ 145 (282)
.+.+.+|+.+..++++.+.++++++.+.. .+.+.+..+.++..++...+++ +|||||||+|++++++++.+++++
T Consensus 5 ~~~~~~y~~~~~~~~~~l~~~~~~a~~~~--~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~ 82 (221)
T 3dr5_A 5 FEYLRTYVESTTETDAAVARAREDAAEFG--LPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNT 82 (221)
T ss_dssp HHHHHHHHHTTSCCCHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHcC--CCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCC
Confidence 35678999998888999999999987764 4567999999999999988888 999999999999999999987789
Q ss_pred EEEEEecCccHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCC
Q 023411 146 CLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRV 224 (282)
Q Consensus 146 ~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkp 224 (282)
+|+++|+++++++.|+++++.+|+. ++++++++|+.+.++.+. .++||+||+|++..++..+++.+.++ |+|
T Consensus 83 ~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~----~~~fD~V~~d~~~~~~~~~l~~~~~~---Lkp 155 (221)
T 3dr5_A 83 TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLA----NDSYQLVFGQVSPMDLKALVDAAWPL---LRR 155 (221)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSC----TTCEEEEEECCCTTTHHHHHHHHHHH---EEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhc----CCCcCeEEEcCcHHHHHHHHHHHHHH---cCC
Confidence 9999999999999999999999998 789999999988765432 47899999999999999999999999 999
Q ss_pred CcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEE
Q 023411 225 GGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQK 281 (282)
Q Consensus 225 gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k 281 (282)
||+++++|++|.|.+.++...+..+.++++|++.+.++++++++++|+|||+++++|
T Consensus 156 GG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~~~~ 212 (221)
T 3dr5_A 156 GGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTVVTK 212 (221)
T ss_dssp EEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEEEEE
T ss_pred CcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHHHHH
Confidence 999999999999999998888888889999999999999999999999999999998
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=6.6e-34 Score=245.15 Aligned_cols=216 Identities=37% Similarity=0.640 Sum_probs=191.7
Q ss_pred ccCCCChhHHHHHHhcc---CChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHH
Q 023411 64 QVISVTPPLYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALV 140 (282)
Q Consensus 64 ~~~~~~~~l~~y~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~ 140 (282)
+.+..++.+++|+.++. ++++.+.++++++.+++.+.+.+.+..+.++..++...++++|||||||+|++++++++.
T Consensus 12 ~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~ 91 (237)
T 3c3y_A 12 TGLLQSEELCQYILRTSVYPREAGFLKELREANESHPDSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALS 91 (237)
T ss_dssp -CCBSCHHHHHHHHHHHTGGGSCHHHHHHHHHHTTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred cccCchHHHHHHHHHcccCCCCCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHh
Confidence 45678899999999863 578899999999988776678899999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCC-CCCceeEEEEcCCccccHHHHHHHHHhh
Q 023411 141 LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG-EASSYDFAFVDAEKRMYQEYFELLLQLL 219 (282)
Q Consensus 141 ~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~-~~~~fDlV~id~~~~~~~~~l~~~~~~~ 219 (282)
++++++|+++|+++++++.|+++++.+|+.++++++++|+.+.++.+..++ ..++||+||+|+++..+..+++.+.++
T Consensus 92 ~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~- 170 (237)
T 3c3y_A 92 IPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKL- 170 (237)
T ss_dssp SCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHH-
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHh-
Confidence 987799999999999999999999999998889999999998877664432 137899999999999999999999999
Q ss_pred cCCCCCcEEEEeCCCCCCcccCCcCCCh-----hhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 220 LQIRVGGIIVIDNVLWHGKVADQMVNDA-----KTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 220 ~~LkpgG~lv~dd~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
|+|||+|+++|++|+|.+.++..... ....+++|++.+.++++++++++|++||+++++|+
T Consensus 171 --L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 171 --VKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp --EEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred --cCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhcCCCeEEEEEEeCCceEEEEEc
Confidence 99999999999999999887643221 24688899999999999999999999999999986
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=6.5e-34 Score=246.76 Aligned_cols=217 Identities=39% Similarity=0.664 Sum_probs=192.0
Q ss_pred cccCCCChhHHHHHHhcc---CChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHH
Q 023411 63 KQVISVTPPLYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIAL 139 (282)
Q Consensus 63 ~~~~~~~~~l~~y~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~ 139 (282)
.+.+..++.+++|+.++. ++++.+.++++++.+++.+.|.+.+..+.++..++...++++|||||||+|++++++++
T Consensus 20 ~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~ 99 (247)
T 1sui_A 20 HKSLLQSDALYQYILETSVFPREHEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATAL 99 (247)
T ss_dssp -CCSBSCHHHHHHHHHHHTSSSCTTHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHH
T ss_pred cccCCchHHHHHHHHHcccCCCCCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHH
Confidence 355678899999999862 67889999999998877667899999999999999999999999999999999999999
Q ss_pred HCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCC-CCCceeEEEEcCCccccHHHHHHHHHh
Q 023411 140 VLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG-EASSYDFAFVDAEKRMYQEYFELLLQL 218 (282)
Q Consensus 140 ~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~-~~~~fDlV~id~~~~~~~~~l~~~~~~ 218 (282)
.++++++|+++|+++++++.|+++++..|+.++++++++|+.+.++.+...+ ..++||+||+|+....+..+++.+.++
T Consensus 100 ~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~ 179 (247)
T 1sui_A 100 AIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDL 179 (247)
T ss_dssp HSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHH
T ss_pred hCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHh
Confidence 9886799999999999999999999999998889999999998777653221 137899999999988899999999999
Q ss_pred hcCCCCCcEEEEeCCCCCCcccCCcCCCh------hhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 219 LLQIRVGGIIVIDNVLWHGKVADQMVNDA------KTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 219 ~~~LkpgG~lv~dd~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
|+|||+|+++|++|+|.+.++...+. ...++++|++.+.++++++++++|++||+++++|+
T Consensus 180 ---LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~l~~k~ 246 (247)
T 1sui_A 180 ---VKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICRRI 246 (247)
T ss_dssp ---BCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHHHHHHHHHTCTTBCCEEECSTTCEEEECBC
T ss_pred ---CCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHHHHHHHHhhCCCeEEEEEecCCccEEEEEc
Confidence 99999999999999999988754332 24589999999999999999999999999999985
No 5
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=4e-33 Score=237.35 Aligned_cols=218 Identities=42% Similarity=0.764 Sum_probs=195.8
Q ss_pred ccccCCCChhHHHHHHhccC-ChHHHHHHHHHHH-ccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHH
Q 023411 62 NKQVISVTPPLYDYILRNVR-EPEILRQLREETA-GMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIAL 139 (282)
Q Consensus 62 ~~~~~~~~~~l~~y~~~~~~-~~~~l~~~~~~~~-~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~ 139 (282)
..+.+.+++.+.+|+.++.. +++.+.++++.+. ..+.+.+.+.+..+.++..++...++.+|||||||+|.++.++++
T Consensus 5 ~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~ 84 (225)
T 3tr6_A 5 SINTTLLTPELYQYLLQVSLREPPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGL 84 (225)
T ss_dssp CCCSCCCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHCTTGGGSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHHHhcCCCCHHHHHHHHHHHhhCCCCccccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHH
Confidence 33556788999999999754 5788889988887 777667889999999999999999999999999999999999999
Q ss_pred HCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhh
Q 023411 140 VLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLL 219 (282)
Q Consensus 140 ~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~ 219 (282)
.++++++|+++|+++++++.++++++..++.++++++++|+.+.++.+...+..++||+||++++...+..+++.+.++
T Consensus 85 ~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~- 163 (225)
T 3tr6_A 85 ALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKL- 163 (225)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHH-
T ss_pred hCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHh-
Confidence 8876789999999999999999999999998889999999988777664322227999999999988899999999999
Q ss_pred cCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 220 LQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 220 ~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
|+|||+++++|++|+|.+.++...+..+.++++|++.+.++++++++++|++||+.+++|+
T Consensus 164 --L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 164 --LREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp --EEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred --cCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 9999999999999999999888888888899999999999999999999999999999996
No 6
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=100.00 E-value=2.6e-33 Score=240.60 Aligned_cols=224 Identities=43% Similarity=0.798 Sum_probs=195.5
Q ss_pred ccccccccccCCCChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHH
Q 023411 56 HDEKYSNKQVISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSS 134 (282)
Q Consensus 56 ~~~~~~~~~~~~~~~~l~~y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t 134 (282)
|--.++.++...+++.+.+|+.+.. .+++.+.++++.+.+...+.|.+.+..+.++..++...++++|||||||+|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~ 87 (232)
T 3cbg_A 8 HHHGSMGKGITGFDPSLYSYLQSISADDSFYLAQLRRETAHLPGAPMQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSA 87 (232)
T ss_dssp -------CCBTTSCHHHHHHHHHTSCCCCHHHHHHHHHTTTSTTGGGSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHH
T ss_pred ccccccccccccchHHHHHHHHHhCCCCCHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHH
Confidence 3344677777789999999999975 568899999998877666567899999999999999889999999999999999
Q ss_pred HHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHH
Q 023411 135 LAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFEL 214 (282)
Q Consensus 135 ~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~ 214 (282)
.++++.++++++|+++|+++++++.|+++++.+++.++++++++|+.+.++.+......++||+||+|++...+..+++.
T Consensus 88 ~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~ 167 (232)
T 3cbg_A 88 LAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDADKRNYPRYYEI 167 (232)
T ss_dssp HHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSCGGGHHHHHHH
T ss_pred HHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCHHHHHHHHHH
Confidence 99999887678999999999999999999999999888999999998877765422111789999999998889999999
Q ss_pred HHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 215 LLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 215 ~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
+.++ |+|||+|+++|++|+|.+.++...+..+.++++|++.+.+++++.++++|++||+++++|+
T Consensus 168 ~~~~---LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 168 GLNL---LRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHHT---EEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHHH---cCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 9998 9999999999999999999887777888999999999999999999999999999999996
No 7
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=100.00 E-value=9.6e-32 Score=229.38 Aligned_cols=213 Identities=38% Similarity=0.644 Sum_probs=191.3
Q ss_pred CCChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCC
Q 023411 67 SVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESG 145 (282)
Q Consensus 67 ~~~~~l~~y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~ 145 (282)
...+.+.+|+.++. .+++.+.++++.+...+.+.+.+.+..+.++..++...++++|||||||+|+++.++++.+++++
T Consensus 16 ~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~ 95 (229)
T 2avd_A 16 PEDSRLWQYLLSRSMREHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADG 95 (229)
T ss_dssp CTTSHHHHHHHHTTCCCCHHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTC
T ss_pred hhHHHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCC
Confidence 35678899999884 56889999999998876677899999999999999999999999999999999999999887678
Q ss_pred EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCC
Q 023411 146 CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVG 225 (282)
Q Consensus 146 ~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkpg 225 (282)
+|+++|+++++++.++++++.+++.++++++++|+.+.++.+...+..++||+||+|.....+..+++.+.++ |+||
T Consensus 96 ~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~---L~pg 172 (229)
T 2avd_A 96 RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQL---LRPG 172 (229)
T ss_dssp EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHH---EEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHH---cCCC
Confidence 9999999999999999999999998889999999988776654321126899999999988888999999999 9999
Q ss_pred cEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 226 GIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 226 G~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
|+++++|++|+|.+.++...+....++++|++.+.++++++++++|++||+++++|+
T Consensus 173 G~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 173 GILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp EEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred eEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEecCCceEEEEEC
Confidence 999999999999998887777888999999999999999999999999999999985
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=100.00 E-value=1.2e-31 Score=228.08 Aligned_cols=209 Identities=31% Similarity=0.506 Sum_probs=189.3
Q ss_pred hhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEE
Q 023411 70 PPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLV 148 (282)
Q Consensus 70 ~~l~~y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~ 148 (282)
+.+.+|+.++. .+++.+.++++.+.....+.+.+++..+.++..++...++.+|||||||+|+++.++++.++++++|+
T Consensus 8 ~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~ 87 (223)
T 3duw_A 8 TAVDQYVSDVLIPKDSTLEEVLQVNAAANLPAHDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVV 87 (223)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHHTTCCSCSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEE
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEE
Confidence 46778999875 46788999999888777777888999999999999999999999999999999999999987678999
Q ss_pred EEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEE
Q 023411 149 ACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGII 228 (282)
Q Consensus 149 ~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~l 228 (282)
++|+++++++.+++++...++.++++++++|+.+.++.+...+ .++||+||+|+....+..+++.+.++ |+|||++
T Consensus 88 ~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-~~~fD~v~~d~~~~~~~~~l~~~~~~---L~pgG~l 163 (223)
T 3duw_A 88 TLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEK-YEPFDFIFIDADKQNNPAYFEWALKL---SRPGTVI 163 (223)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT-CCCCSEEEECSCGGGHHHHHHHHHHT---CCTTCEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcC-CCCcCEEEEcCCcHHHHHHHHHHHHh---cCCCcEE
Confidence 9999999999999999999998889999999988777664332 26799999999988889999999998 9999999
Q ss_pred EEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeec-----CCceEEEEEC
Q 023411 229 VIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPI-----GDGMTICQKR 282 (282)
Q Consensus 229 v~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-----~~Gl~~~~k~ 282 (282)
+++|++|+|.+.++...+.....+++|++.+.++++++++++|+ +||+.+|++|
T Consensus 164 v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 164 IGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp EEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccCCCCCCeeEEEEEe
Confidence 99999999999988877888899999999999999999999999 9999999985
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=6.1e-31 Score=228.02 Aligned_cols=208 Identities=29% Similarity=0.499 Sum_probs=185.5
Q ss_pred ChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEE
Q 023411 69 TPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCL 147 (282)
Q Consensus 69 ~~~l~~y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v 147 (282)
.+.+.+|+.+.. .+.+.+.++++.+.+...+.+.+++..+.++..++...++.+|||||||+|+++.++++.++++++|
T Consensus 12 ~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v 91 (248)
T 3tfw_A 12 WSAVDNYLIKALIPGDPVLDRVLENNHRAGLPAHDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQL 91 (248)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCBSCCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEE
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEE
Confidence 345778988764 4578889998888777666678899999999999999999999999999999999999998767899
Q ss_pred EEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcE
Q 023411 148 VACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGI 227 (282)
Q Consensus 148 ~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~ 227 (282)
+++|+++++++.|+++++..++.++++++++|+.+.++.+. +.++||+||+|+....+..+++.+.++ |+|||+
T Consensus 92 ~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~---~~~~fD~V~~d~~~~~~~~~l~~~~~~---LkpGG~ 165 (248)
T 3tfw_A 92 LTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG---ECPAFDLIFIDADKPNNPHYLRWALRY---SRPGTL 165 (248)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC---SCCCCSEEEECSCGGGHHHHHHHHHHT---CCTTCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC---CCCCeEEEEECCchHHHHHHHHHHHHh---cCCCeE
Confidence 99999999999999999999998889999999988766441 124899999999988899999999998 999999
Q ss_pred EEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEe-ecC----CceEEEEEC
Q 023411 228 IVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMV-PIG----DGMTICQKR 282 (282)
Q Consensus 228 lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~----~Gl~~~~k~ 282 (282)
|+++|++|.|.+.++...+..+.++++|++.+.++++++++++ |++ ||+.+|+||
T Consensus 166 lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 166 IIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAWVN 225 (248)
T ss_dssp EEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSEEEEEEEEC
T ss_pred EEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCCeeEEEEEe
Confidence 9999999999999988888888999999999999999999988 666 999999986
No 10
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.98 E-value=2e-31 Score=228.68 Aligned_cols=208 Identities=23% Similarity=0.367 Sum_probs=179.0
Q ss_pred ccCCCChhHHHHHHhccC-ChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCC
Q 023411 64 QVISVTPPLYDYILRNVR-EPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLP 142 (282)
Q Consensus 64 ~~~~~~~~l~~y~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~ 142 (282)
....+++.+.+|+.+... +++.+.++++...... .+.+.+..+.++..++...++.+|||||||+|+++.+++...+
T Consensus 17 ~~~~~~~~l~~yl~~~~~~~~~~l~~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~ 94 (232)
T 3ntv_A 17 RGSHMDDLNKKYLIDLHQHQNSSIEVLREFAEVNE--VPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD 94 (232)
T ss_dssp ----CHHHHHHHHHHHHGGGCCGGGGHHHHHHHTT--CCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT
T ss_pred CCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC
Confidence 345678899999998754 3556667777665543 3567899999999999999999999999999999999999665
Q ss_pred CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHH-HHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcC
Q 023411 143 ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK-ALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQ 221 (282)
Q Consensus 143 ~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~-~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~ 221 (282)
+++|+++|+++++++.|+++++..++.++++++++|+.+.++ .+ .++||+||++.....+..+++.+.++
T Consensus 95 -~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-----~~~fD~V~~~~~~~~~~~~l~~~~~~--- 165 (232)
T 3ntv_A 95 -DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN-----DKVYDMIFIDAAKAQSKKFFEIYTPL--- 165 (232)
T ss_dssp -TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT-----TSCEEEEEEETTSSSHHHHHHHHGGG---
T ss_pred -CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc-----cCCccEEEEcCcHHHHHHHHHHHHHh---
Confidence 789999999999999999999999998889999999988777 55 58999999999999999999999998
Q ss_pred CCCCcEEEEeCCCCCCcccCCcC-CC----hhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 222 IRVGGIIVIDNVLWHGKVADQMV-ND----AKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 222 LkpgG~lv~dd~~~~g~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
|+|||+|+++|++|.|.+.++.. .. ....++++|++.+.++++++++++|++||+.+++|+
T Consensus 166 LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 166 LKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp EEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECSTTCEEEEEEC
T ss_pred cCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEcCCceEEEEEC
Confidence 99999999999999999887654 22 224589999999999999999999999999999996
No 11
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.98 E-value=3.9e-30 Score=221.40 Aligned_cols=215 Identities=42% Similarity=0.753 Sum_probs=189.5
Q ss_pred cCCCChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCC
Q 023411 65 VISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE 143 (282)
Q Consensus 65 ~~~~~~~l~~y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~ 143 (282)
.....+.+.+|+.... .+++.+.++++.+.....+.+.+.+..+.++..++...++.+|||||||+|+++..+++.+++
T Consensus 5 ~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~ 84 (239)
T 2hnk_A 5 NISLTESLEEYIFRNSVREPDSFLKLRKETGTLAQANMQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPE 84 (239)
T ss_dssp SCCCCHHHHHHHHHTTCCCCHHHHHHHHHHHTC---CCSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCT
T ss_pred cccchHHHHHHHHHccCCCCHHHHHHHHHHHHcCCcccccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCC
Confidence 3567889999999975 568899999999988777778999999999999999999999999999999999999999876
Q ss_pred CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC---------CCC--CceeEEEEcCCccccHHHH
Q 023411 144 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN---------GEA--SSYDFAFVDAEKRMYQEYF 212 (282)
Q Consensus 144 ~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~---------~~~--~~fDlV~id~~~~~~~~~l 212 (282)
+++|+++|+++++++.|+++++..++.++++++++|+.+.++.+... ... ++||+||++.....+..++
T Consensus 85 ~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l 164 (239)
T 2hnk_A 85 DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYY 164 (239)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHH
Confidence 78999999999999999999999998888999999998866654321 011 6899999999988888999
Q ss_pred HHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 213 ELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 213 ~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
+.+.++ |+|||++++++++|+|.+.++.........++.|++.+..++.+.+.++|+++|+.+++|+
T Consensus 165 ~~~~~~---L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 165 PLILKL---LKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp HHHHHH---EEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHH---cCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 999999 9999999999999999998887777778899999999999999999999999999999985
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.97 E-value=1.3e-29 Score=213.72 Aligned_cols=203 Identities=19% Similarity=0.276 Sum_probs=171.1
Q ss_pred CChhHHHHHHhccC-ChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCE
Q 023411 68 VTPPLYDYILRNVR-EPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGC 146 (282)
Q Consensus 68 ~~~~l~~y~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~ 146 (282)
..+.+++|+.++.. +++.+.++++.+.+.. .+.+.+..+.++..++...++.+|||||||+|+++.++++.++++++
T Consensus 6 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~ 83 (210)
T 3c3p_A 6 VDSRIGAYLDGLLPEADPVVAAMEQIARERN--IPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSR 83 (210)
T ss_dssp BCHHHHHHHHHTSCSCCHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCE
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCE
Confidence 56788999998764 5778888888887653 45789999999999988888999999999999999999998876789
Q ss_pred EEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCc
Q 023411 147 LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGG 226 (282)
Q Consensus 147 v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG 226 (282)
|+++|+++++++.|+++++..++.++++++++|+.+.++.. .+ ||+||+|.....+..+++.+.++ |+|||
T Consensus 84 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~-fD~v~~~~~~~~~~~~l~~~~~~---LkpgG 154 (210)
T 3c3p_A 84 VVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ-----RD-IDILFMDCDVFNGADVLERMNRC---LAKNA 154 (210)
T ss_dssp EEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC-----CS-EEEEEEETTTSCHHHHHHHHGGG---EEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC-----CC-CCEEEEcCChhhhHHHHHHHHHh---cCCCe
Confidence 99999999999999999999998888999999998765543 35 99999999888888999999988 99999
Q ss_pred EEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 227 IIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 227 ~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
+++++|++|.|.+.++ ........+++|++.+.+++++.+.++|+++|+.+++|+
T Consensus 155 ~lv~~~~~~~g~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 155 LLIAVNALRRGSVAES-HEDPETAALREFNHHLSRRRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp EEEEESSSSCC-------------CCCHHHHHHTTCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEEECccccCcccCc-ccchHHHHHHHHHHHHhhCCCeEEEEEecCCceEEEEeC
Confidence 9999999999987754 444556678999999999999999999999999999986
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.96 E-value=1.7e-27 Score=202.56 Aligned_cols=198 Identities=20% Similarity=0.327 Sum_probs=167.2
Q ss_pred ChhHHHHHHhccCC---hHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCC
Q 023411 69 TPPLYDYILRNVRE---PEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESG 145 (282)
Q Consensus 69 ~~~l~~y~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~ 145 (282)
...+++|+.++... ..+++.+.+...... ..+.+++..+.++..++...++.+|||||||+|.+++++++.+++++
T Consensus 6 ~~~~~~y~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~ 84 (221)
T 3u81_A 6 EQRILRYVQQNAKPGDPQSVLEAIDTYCTQKE-WAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGA 84 (221)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHT-CGGGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTC
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHhhhcC-cCcccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCC
Confidence 35788999987542 356777777776553 45789999999999999999999999999999999999999887679
Q ss_pred EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCC
Q 023411 146 CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVG 225 (282)
Q Consensus 146 ~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkpg 225 (282)
+|+++|+++++++.|+++++.+++.++++++++|+.+.++.+....+.++||+||+|+....+...++.+..+ ++|+||
T Consensus 85 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lkpg 163 (221)
T 3u81_A 85 RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKG 163 (221)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTT
T ss_pred EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCC
Confidence 9999999999999999999999998889999999987666542211126899999999988887766666543 559999
Q ss_pred cEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEee-------cCCceEEEEEC
Q 023411 226 GIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVP-------IGDGMTICQKR 282 (282)
Q Consensus 226 G~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp-------~~~Gl~~~~k~ 282 (282)
|+++++|+.++|. ++|++.+.+++++++..+| ++||+.+++++
T Consensus 164 G~lv~~~~~~~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 164 TVLLADNVIVPGT--------------PDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp CEEEESCCCCCCC--------------HHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred eEEEEeCCCCcch--------------HHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 9999999998875 6788999999999999999 79999999975
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.95 E-value=6.1e-27 Score=200.42 Aligned_cols=206 Identities=28% Similarity=0.492 Sum_probs=163.7
Q ss_pred CChhHHHHHHhccC-ChHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCE
Q 023411 68 VTPPLYDYILRNVR-EPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGC 146 (282)
Q Consensus 68 ~~~~l~~y~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~ 146 (282)
.++.+++|+.++.. +++.+.++.+..... ..+.+.+....++..++...++.+|||||||+|.++..+++.++ +++
T Consensus 4 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~ 80 (233)
T 2gpy_A 4 IEERLKHYLEKQIPARDQYIEQMEREAHEQ--QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EAT 80 (233)
T ss_dssp -CHHHHHHHHTTCCCCCHHHHHHHHHHHHT--TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCE
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHHHc--CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCE
Confidence 56788999999865 578888888887654 34568999999999999999999999999999999999999987 789
Q ss_pred EEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCc
Q 023411 147 LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGG 226 (282)
Q Consensus 147 v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG 226 (282)
|+++|+++++++.|+++++..++.++++++++|+.+.++.... .++||+||++.....+..+++.+.++ |+|||
T Consensus 81 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~---~~~fD~I~~~~~~~~~~~~l~~~~~~---L~pgG 154 (233)
T 2gpy_A 81 IVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLEL---YPLFDVLFIDAAKGQYRRFFDMYSPM---VRPGG 154 (233)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTT---SCCEEEEEEEGGGSCHHHHHHHHGGG---EEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhccc---CCCccEEEECCCHHHHHHHHHHHHHH---cCCCe
Confidence 9999999999999999999999888899999999886555421 36899999999888888889999888 99999
Q ss_pred EEEEeCCCCCCcccCCcC----CChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023411 227 IIVIDNVLWHGKVADQMV----NDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 282 (282)
Q Consensus 227 ~lv~dd~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k~ 282 (282)
+++++|++|.|.+.++.. .......+++|++.+.+++.+.+.++|+++|+.+++|+
T Consensus 155 ~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~dG~~~~~~~ 214 (233)
T 2gpy_A 155 LILSDNVLFRGLVAETDIEHKRHKQLATKIDTYNQWLLEHPQYDTRIFPVGDGIAISIKR 214 (233)
T ss_dssp EEEEETTTC-------------------------CTTTTCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEEEcCCcCCccCCccccccchhHHHHHHHHHHHHHHhCCCeEEEEEEcCCeEEEEEEc
Confidence 999999999998765431 11223568889899999999999999999999999985
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.79 E-value=1.2e-18 Score=145.33 Aligned_cols=153 Identities=16% Similarity=0.114 Sum_probs=118.0
Q ss_pred CCCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCC--CCcEE
Q 023411 97 RGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV--SHKVK 174 (282)
Q Consensus 97 ~~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~v~ 174 (282)
+.+.+.+.+.++++|.. ...++++|||||| |++|+++++. + +++|++||.++++.+.|+++++.+|+ .++++
T Consensus 10 ~~P~~~v~~~~~~~L~~--~l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~ 83 (202)
T 3cvo_A 10 MRPELTMPPAEAEALRM--AYEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVN 83 (202)
T ss_dssp CCCCCCSCHHHHHHHHH--HHHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEE
T ss_pred CCCCccCCHHHHHHHHH--HhhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceE
Confidence 34567899999999988 4457889999998 6899999984 4 69999999999999999999999998 88999
Q ss_pred EEEcchhhH--------------HHHHH----hCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCCCC
Q 023411 175 IKHGLAADS--------------LKALI----LNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVLWH 236 (282)
Q Consensus 175 ~~~gd~~~~--------------l~~l~----~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~ 236 (282)
++.+|+.+. ++.+. .....++||+||+|+.+.. .++..+.++ |+|||+|++||+.+.
T Consensus 84 ~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~--~~~~~~l~~---l~~GG~Iv~DNv~~r 158 (202)
T 3cvo_A 84 IVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRV--GCALATAFS---ITRPVTLLFDDYSQR 158 (202)
T ss_dssp EEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHH--HHHHHHHHH---CSSCEEEEETTGGGC
T ss_pred EEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCch--hHHHHHHHh---cCCCeEEEEeCCcCC
Confidence 999996543 22221 1111378999999998663 566677788 999999999998766
Q ss_pred CcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEe
Q 023411 237 GKVADQMVNDAKTISIRNFNKNLMEDERVSISMV 270 (282)
Q Consensus 237 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (282)
+.- ..+.+|++.+...++.-...+
T Consensus 159 ~~y----------~~v~~~~~~~~~~~~~a~f~~ 182 (202)
T 3cvo_A 159 RWQ----------HQVEEFLGAPLMIGRLAAFQV 182 (202)
T ss_dssp SSG----------GGGHHHHCCCEEETTEEEEEE
T ss_pred cch----------HHHHHHHhHHhhcCceEEEEe
Confidence 542 225677776666666554433
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.73 E-value=1.3e-17 Score=146.21 Aligned_cols=158 Identities=13% Similarity=0.183 Sum_probs=125.1
Q ss_pred cCHHHHHHHHHHHhh----cCCCEEEEEcccccHHHHHHHHHCC----CCCEEEEEecCcc-------------------
Q 023411 103 VSPDQAQLLAMLVQI----LGAQRCIEVGVYTGYSSLAIALVLP----ESGCLVACERDAR------------------- 155 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~----~~~~~VLEIG~G~G~~t~~la~~~~----~~~~v~~iD~s~~------------------- 155 (282)
++.....++..+++. ..++.|||+||+.|+++++++..++ ++++|+++|..+.
T Consensus 86 v~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~ 165 (282)
T 2wk1_A 86 IGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHR 165 (282)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGG
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccc
Confidence 445667777777664 4588999999999999999988764 3688999996432
Q ss_pred -------HHHHHHHHHHHhCCC-CcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCc-cccHHHHHHHHHhhcCCCCCc
Q 023411 156 -------SLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-RMYQEYFELLLQLLLQIRVGG 226 (282)
Q Consensus 156 -------~~~~a~~~~~~~g~~-~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~-~~~~~~l~~~~~~~~~LkpgG 226 (282)
..+.++++++..|+. ++++++.|++.+.++.+. .++||+||+|+.+ ..+..+++.+.++ |+|||
T Consensus 166 ~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~----~~~~d~vfIDaD~y~~~~~~Le~~~p~---L~pGG 238 (282)
T 2wk1_A 166 RNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAP----IDTLAVLRMDGDLYESTWDTLTNLYPK---VSVGG 238 (282)
T ss_dssp GHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCC----CCCEEEEEECCCSHHHHHHHHHHHGGG---EEEEE
T ss_pred ccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCC----CCCEEEEEEcCCccccHHHHHHHHHhh---cCCCE
Confidence 467799999999994 889999999998877642 4689999999986 3467788999888 99999
Q ss_pred EEEEeCCCC-CCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEE
Q 023411 227 IIVIDNVLW-HGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQK 281 (282)
Q Consensus 227 ~lv~dd~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~k 281 (282)
+|++||+.| +| .+.++++|++. .++...++++..+...-||
T Consensus 239 iIv~DD~~~~~G----------~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 239 YVIVDDYMMCPP----------CKDAVDEYRAK----FDIADELITIDRDGVYWQR 280 (282)
T ss_dssp EEEESSCTTCHH----------HHHHHHHHHHH----TTCCSCCEECSSSCEEEEC
T ss_pred EEEEcCCCCCHH----------HHHHHHHHHHh----cCCceEEEEecCEEEEEEe
Confidence 999999964 22 36788888764 3567778888877776665
No 17
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.70 E-value=6.9e-17 Score=144.22 Aligned_cols=149 Identities=23% Similarity=0.353 Sum_probs=112.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
..+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+.++.. .+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-----~~ 180 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH-----KN 180 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC-----TT
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc-----CC
Confidence 4678999999999999999998654 689999999999999999998653 33 468999999998876542 57
Q ss_pred ceeEEEEcCCcc------cc-HHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCeEE
Q 023411 195 SYDFAFVDAEKR------MY-QEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSI 267 (282)
Q Consensus 195 ~fDlV~id~~~~------~~-~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (282)
+||+|++|.... .+ ..+++.+.++ |+|||++++++. .+. ........+.++++.+..+..+..
T Consensus 181 ~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~---LkpgG~lv~~~~----~~~---~~~~~~~~~~~~l~~vF~~v~~~~ 250 (314)
T 2b2c_A 181 EFDVIITDSSDPVGPAESLFGQSYYELLRDA---LKEDGILSSQGE----SVW---LHLPLIAHLVAFNRKIFPAVTYAQ 250 (314)
T ss_dssp CEEEEEECCC-------------HHHHHHHH---EEEEEEEEEECC----CTT---TCHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHhh---cCCCeEEEEECC----Ccc---cCHHHHHHHHHHHHHHCCcceEEE
Confidence 899999987421 12 5788888888 999999999862 111 012334567777877766666777
Q ss_pred EEeec---CC-ceEEEEEC
Q 023411 268 SMVPI---GD-GMTICQKR 282 (282)
Q Consensus 268 ~~lp~---~~-Gl~~~~k~ 282 (282)
..+|. |+ |+.+|.|+
T Consensus 251 ~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 251 SIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp EECTTSGGGEEEEEEEESS
T ss_pred EEecCcCCCceEEEEEeCC
Confidence 78887 45 88888763
No 18
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.70 E-value=1.1e-15 Score=134.48 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=92.7
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
.++...++.+|||||||+|..+..++...+ +++|+++|+++++++.|+++++..|+ ++++++++|+.+. +
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~------- 185 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D------- 185 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G-------
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C-------
Confidence 356778999999999999876644444444 68999999999999999999999999 7899999999874 2
Q ss_pred CCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 193 ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 193 ~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.++||+||+++...+....++.+.+. |||||+|++.+.
T Consensus 186 d~~FDvV~~~a~~~d~~~~l~el~r~---LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 GLEFDVLMVAALAEPKRRVFRNIHRY---VDTETRIIYRTY 223 (298)
T ss_dssp GCCCSEEEECTTCSCHHHHHHHHHHH---CCTTCEEEEEEC
T ss_pred CCCcCEEEECCCccCHHHHHHHHHHH---cCCCcEEEEEcC
Confidence 37899999988877788899999999 999999999874
No 19
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.70 E-value=2e-16 Score=133.37 Aligned_cols=163 Identities=13% Similarity=0.095 Sum_probs=116.6
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC----cEEEEEc
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH----KVKIKHG 178 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~----~v~~~~g 178 (282)
+.+.....+..++...++.+|||||||+|.++..+++..+ ..+|+++|+++.+++.+++++...++.+ +++++++
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS 91 (219)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC
T ss_pred chHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC
Confidence 4445555666666667889999999999999999998654 5799999999999999999998777764 7999999
Q ss_pred chhhHHHHHHhCCCCCceeEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCCccc-C--------CcC
Q 023411 179 LAADSLKALILNGEASSYDFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHGKVA-D--------QMV 244 (282)
Q Consensus 179 d~~~~l~~l~~~~~~~~fDlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~-~--------~~~ 244 (282)
|+.... .. .++||+|++....++. ..+++.+.++ |+|||+++.......+... . ...
T Consensus 92 d~~~~~-~~-----~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~ 162 (219)
T 3jwg_A 92 SLVYRD-KR-----FSGYDAATVIEVIEHLDENRLQAFEKVLFEF---TRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDH 162 (219)
T ss_dssp CSSSCC-GG-----GTTCSEEEEESCGGGCCHHHHHHHHHHHHTT---TCCSEEEEEEEBGGGGGCCCCT-----GGGCC
T ss_pred cccccc-cc-----cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHh---hCCCEEEEEccchhhhhhhcccCcccccccCc
Confidence 985421 11 4789999998775443 3456666666 9999988774332111111 0 000
Q ss_pred -CChhhHHHHHHHHHhhhCCCeEEEEeecCCc
Q 023411 245 -NDAKTISIRNFNKNLMEDERVSISMVPIGDG 275 (282)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~G 275 (282)
..-....++.|.+.+.+.-++++...+++++
T Consensus 163 ~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 163 RFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp TTSBCHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred eeeecHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 0013456777878887777999998887665
No 20
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.69 E-value=8.8e-17 Score=142.98 Aligned_cols=147 Identities=18% Similarity=0.337 Sum_probs=114.2
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHH--hCC-CCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~-~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
..+++|||||||+|..+..+++..+ ..+|++||+++++++.|++++.. .++ .++++++++|+.+.++.. .+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-----~~ 167 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN-----QD 167 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC-----SS
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC-----CC
Confidence 4678999999999999999998644 58999999999999999999876 344 467999999998766542 57
Q ss_pred ceeEEEEcCCcc-------ccHHHHHHHHHhhcCCCCCcEEEEeCC-CCCCcccCCcCCChhhHHHHHHHHHhhhCCCeE
Q 023411 195 SYDFAFVDAEKR-------MYQEYFELLLQLLLQIRVGGIIVIDNV-LWHGKVADQMVNDAKTISIRNFNKNLMEDERVS 266 (282)
Q Consensus 195 ~fDlV~id~~~~-------~~~~~l~~~~~~~~~LkpgG~lv~dd~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (282)
+||+||+|.... ....+++.+.++ |+|||++++++. .|.. ......++++++.+..+..+.
T Consensus 168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~---LkpgG~lv~~~~~~~~~--------~~~~~~~~~~l~~~f~~v~~~ 236 (304)
T 2o07_A 168 AFDVIITDSSDPMGPAESLFKESYYQLMKTA---LKEDGVLCCQGECQWLH--------LDLIKEMRQFCQSLFPVVAYA 236 (304)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHH---EEEEEEEEEEEECTTTC--------HHHHHHHHHHHHHHCSEEEEE
T ss_pred CceEEEECCCCCCCcchhhhHHHHHHHHHhc---cCCCeEEEEecCCcccc--------hHHHHHHHHHHHHhCCCceeE
Confidence 899999987642 234678888888 999999999863 3332 123456788888887777777
Q ss_pred EEEeecC----CceEEEEE
Q 023411 267 ISMVPIG----DGMTICQK 281 (282)
Q Consensus 267 ~~~lp~~----~Gl~~~~k 281 (282)
...+|.- .|+.+|.|
T Consensus 237 ~~~vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 237 YCTIPTYPSGQIGFMLCSK 255 (304)
T ss_dssp EEECTTSGGGEEEEEEEES
T ss_pred EEEeccccCcceEEEEEeC
Confidence 7788873 58888876
No 21
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.69 E-value=1.5e-16 Score=134.02 Aligned_cols=164 Identities=15% Similarity=0.176 Sum_probs=117.7
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC----cEEEEE
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH----KVKIKH 177 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~----~v~~~~ 177 (282)
.+.+.....+...+...++.+|||||||+|.++..+++..+ ..+|+++|+++.+++.+++++...++.. ++++++
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ 90 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe
Confidence 34455556666677777889999999999999999998654 5799999999999999999998777764 799999
Q ss_pred cchhhHHHHHHhCCCCCceeEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCC-----CCCcc----cCCc
Q 023411 178 GLAADSLKALILNGEASSYDFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVL-----WHGKV----ADQM 243 (282)
Q Consensus 178 gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~-----~~g~~----~~~~ 243 (282)
+|+.... .. .++||+|++.....+. ..+++.+.++ |+|||++++.... |.+.. ....
T Consensus 91 ~d~~~~~-~~-----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~ 161 (217)
T 3jwh_A 91 GALTYQD-KR-----FHGYDAATVIEVIEHLDLSRLGAFERVLFEF---AQPKIVIVTTPNIEYNVKFANLPAGKLRHKD 161 (217)
T ss_dssp CCTTSCC-GG-----GCSCSEEEEESCGGGCCHHHHHHHHHHHHTT---TCCSEEEEEEEBHHHHHHTC-----------
T ss_pred CCccccc-cc-----CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHH---cCCCEEEEEccCcccchhhcccccccccccc
Confidence 9985321 11 3789999998775432 4456666666 9999988875432 11110 0010
Q ss_pred CC-ChhhHHHHHHHHHhhhCCCeEEEEeecCCc
Q 023411 244 VN-DAKTISIRNFNKNLMEDERVSISMVPIGDG 275 (282)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~~~~~~lp~~~G 275 (282)
.. .-....++.|.+.+.++-+|++...++++.
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 162 HRFEWTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp CCSCBCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred cccccCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 00 013456778888888888999999888764
No 22
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=1.2e-15 Score=125.95 Aligned_cols=110 Identities=18% Similarity=0.186 Sum_probs=88.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..++.++.. + ..+|+++|+++++++.++++++.+++ ++++++++|+.+..+... .++||
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~----~~~fD 115 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGT----TSPVD 115 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCC----SSCCS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhcc----CCCcc
Confidence 46789999999999999988774 2 46899999999999999999999998 569999999988765431 47999
Q ss_pred EEEEcCCccc----cHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 198 FAFVDAEKRM----YQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 198 lV~id~~~~~----~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
+|+++.+... ....++.+.+ .++|+|||+++++....
T Consensus 116 ~i~~~~p~~~~~~~~~~~l~~~~~-~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 116 LVLADPPYNVDSADVDAILAALGT-NGWTREGTVAVVERATT 156 (189)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHH-SSSCCTTCEEEEEEETT
T ss_pred EEEECCCCCcchhhHHHHHHHHHh-cCccCCCeEEEEEecCC
Confidence 9999987544 4556666666 12499999999976543
No 23
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.68 E-value=4.8e-16 Score=129.73 Aligned_cols=120 Identities=16% Similarity=0.280 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 023411 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (282)
Q Consensus 104 ~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (282)
..+....+...+...++.+|||+|||+|..+..+++..+ .++|+++|+++++++.++++++..++ ++++++++|+.+.
T Consensus 25 ~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 102 (204)
T 3e05_A 25 KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEG 102 (204)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTT
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhh
Confidence 344444444555566788999999999999999999875 68999999999999999999999998 5699999999765
Q ss_pred HHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 184 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 184 l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
++. .++||+|+++........+++.+.++ |+|||.+++....
T Consensus 103 ~~~------~~~~D~i~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~ 144 (204)
T 3e05_A 103 LDD------LPDPDRVFIGGSGGMLEEIIDAVDRR---LKSEGVIVLNAVT 144 (204)
T ss_dssp CTT------SCCCSEEEESCCTTCHHHHHHHHHHH---CCTTCEEEEEECB
T ss_pred hhc------CCCCCEEEECCCCcCHHHHHHHHHHh---cCCCeEEEEEecc
Confidence 432 36899999998877888899999999 9999999996553
No 24
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.68 E-value=9e-16 Score=128.64 Aligned_cols=118 Identities=18% Similarity=0.215 Sum_probs=96.9
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
..+.....+.......++.+|||+|||+|..+..+++. +++|+++|+++++++.|+++++..++.++++++++|+.+
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 39 TKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred CcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 34444445555556667889999999999999999986 589999999999999999999999988679999999987
Q ss_pred HHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
.++. ..+||+||++... ... +++.+.++ |+|||.+++....
T Consensus 116 ~~~~------~~~~D~v~~~~~~-~~~-~l~~~~~~---LkpgG~lv~~~~~ 156 (204)
T 3njr_A 116 ALAD------LPLPEAVFIGGGG-SQA-LYDRLWEW---LAPGTRIVANAVT 156 (204)
T ss_dssp GGTT------SCCCSEEEECSCC-CHH-HHHHHHHH---SCTTCEEEEEECS
T ss_pred hccc------CCCCCEEEECCcc-cHH-HHHHHHHh---cCCCcEEEEEecC
Confidence 5432 3589999998754 334 88899998 9999999997653
No 25
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.68 E-value=1.1e-16 Score=137.30 Aligned_cols=116 Identities=16% Similarity=0.288 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHH---CCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 105 PDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALV---LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~---~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
+....++..++...++.+|||||||+|+++..+++. +.++++|++||+++++++.|+ +..++++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcch
Confidence 777778888887778899999999999999999987 444789999999999988876 23357999999997
Q ss_pred hH--HHHHHhCCCCCceeEEEEcCCccccHHHHHHHHH-hhcCCCCCcEEEEeCC
Q 023411 182 DS--LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQ-LLLQIRVGGIIVIDNV 233 (282)
Q Consensus 182 ~~--l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~-~~~~LkpgG~lv~dd~ 233 (282)
+. ++... ..+||+|+++..+.++...+..+.+ + |+|||+++++++
T Consensus 141 ~~~~l~~~~----~~~fD~I~~d~~~~~~~~~l~~~~r~~---LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHLR----EMAHPLIFIDNAHANTFNIMKWAVDHL---LEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGGS----SSCSSEEEEESSCSSHHHHHHHHHHHT---CCTTCEEEECSC
T ss_pred hHHHHHhhc----cCCCCEEEECCchHhHHHHHHHHHHhh---CCCCCEEEEEeC
Confidence 64 33220 2479999999887777778888875 8 999999999986
No 26
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.66 E-value=5e-16 Score=126.24 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=94.6
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH
Q 023411 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (282)
Q Consensus 108 ~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l 187 (282)
...+.......++.+|||+|||+|..+..+++..+ +++|+++|+++.+++.+++++...++.+++ ++++|..+.++..
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 33444444556778999999999999999999875 689999999999999999999999888678 8889987654431
Q ss_pred HhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 188 ILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 188 ~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
.++||+|++.....+ ..+++.+.++ |+|||.+++....
T Consensus 92 -----~~~~D~i~~~~~~~~-~~~l~~~~~~---L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 92 -----PDNPDVIFIGGGLTA-PGVFAAAWKR---LPVGGRLVANAVT 129 (178)
T ss_dssp -----CSCCSEEEECC-TTC-TTHHHHHHHT---CCTTCEEEEEECS
T ss_pred -----CCCCCEEEECCcccH-HHHHHHHHHh---cCCCCEEEEEeec
Confidence 378999999887655 6678888888 9999999997653
No 27
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.66 E-value=7.4e-16 Score=134.12 Aligned_cols=115 Identities=13% Similarity=0.258 Sum_probs=92.8
Q ss_pred HHHHHHh--hcCCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH
Q 023411 110 LLAMLVQ--ILGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 186 (282)
Q Consensus 110 ll~~l~~--~~~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~ 186 (282)
++..++. ..++.+|||+|||+|..+..+++.++ ++++|+|||+|+.|++.|+++++..+...+++++++|+.+. +
T Consensus 59 ~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-~- 136 (261)
T 4gek_A 59 MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-A- 136 (261)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-C-
T ss_pred HHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-c-
Confidence 3444443 35778999999999999999999874 35799999999999999999999988888899999999764 1
Q ss_pred HHhCCCCCceeEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 187 LILNGEASSYDFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 187 l~~~~~~~~fDlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
.++||+|++....+. ....++.+.+. |||||++++.+...
T Consensus 137 ------~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~---LkpGG~lii~e~~~ 181 (261)
T 4gek_A 137 ------IENASMVVLNFTLQFLEPSERQALLDKIYQG---LNPGGALVLSEKFS 181 (261)
T ss_dssp ------CCSEEEEEEESCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEEBC
T ss_pred ------ccccccceeeeeeeecCchhHhHHHHHHHHH---cCCCcEEEEEeccC
Confidence 367999998766432 33467778887 99999999876544
No 28
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.65 E-value=8.5e-16 Score=126.07 Aligned_cols=135 Identities=13% Similarity=0.120 Sum_probs=95.8
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++. +++|+++|+++++++.|+++++..++ +++++++++..+..... .++||
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~-----~~~fD 91 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYV-----REPIR 91 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTC-----CSCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhc-----cCCcC
Confidence 46789999999999999999986 58999999999999999999999998 56999997775432111 47899
Q ss_pred EEEEcC-Cc-----------cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCCe
Q 023411 198 FAFVDA-EK-----------RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERV 265 (282)
Q Consensus 198 lV~id~-~~-----------~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (282)
+|+++. .. ......++.+.++ |||||.+++- .|.+.. ........+.+|.+.+.. ..+
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~i~--~~~~~~----~~~~~~~~~~~~~~~l~~-~~~ 161 (185)
T 3mti_A 92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDR---LEVGGRLAIM--IYYGHD----GGDMEKDAVLEYVIGLDQ-RVF 161 (185)
T ss_dssp EEEEEEC-----------CHHHHHHHHHHHHHH---EEEEEEEEEE--EC----------CHHHHHHHHHHHHSCT-TTE
T ss_pred EEEEeCCCCCCcchhcccChhhHHHHHHHHHHh---cCCCcEEEEE--EeCCCC----CCHHHHHHHHHHHHhCCC-ceE
Confidence 999873 21 2223456777777 9999999884 444432 122334566677666543 356
Q ss_pred EEEEee
Q 023411 266 SISMVP 271 (282)
Q Consensus 266 ~~~~lp 271 (282)
.+..+.
T Consensus 162 ~~~~~~ 167 (185)
T 3mti_A 162 TAMLYQ 167 (185)
T ss_dssp EEEEEE
T ss_pred EEEEeh
Confidence 665544
No 29
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.65 E-value=1e-15 Score=136.65 Aligned_cols=149 Identities=15% Similarity=0.140 Sum_probs=108.3
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHH--hC-C-CCcEEEEEcchhhHHHHHHhCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AG-V-SHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g-~-~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
..+++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++.. .+ + ..+++++++|+.+.++.. .
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-----~ 149 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT-----E 149 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-----C
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-----C
Confidence 4678999999999999999998654 67999999999999999999875 22 2 457999999998876543 5
Q ss_pred CceeEEEEcCCccc----------cHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCC
Q 023411 194 SSYDFAFVDAEKRM----------YQEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDE 263 (282)
Q Consensus 194 ~~fDlV~id~~~~~----------~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (282)
++||+|++|...+. ...+++.+.++ |+|||++++... .... ........+...++.+....
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~---LkpgG~lv~~~~----~~~~--~~~~~~~~~~~~l~~~F~~v 220 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAH---LNPGGVMGMQTG----MILL--THHRVHPVVHRTVREAFRYV 220 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHT---EEEEEEEEEEEE----EECC-----CHHHHHHHHHHTTCSEE
T ss_pred CCccEEEECCCCcccccCcchhccHHHHHHHHHHh---cCCCcEEEEEcc----Cccc--cCHHHHHHHHHHHHHHCCce
Confidence 78999999876433 46788999888 999999999621 1110 01122334455555443344
Q ss_pred CeEEEEeecCCc---eEEEEE
Q 023411 264 RVSISMVPIGDG---MTICQK 281 (282)
Q Consensus 264 ~~~~~~lp~~~G---l~~~~k 281 (282)
.+....+|..+| +.+|.|
T Consensus 221 ~~~~~~vP~~~g~~~~~~as~ 241 (314)
T 1uir_A 221 RSYKNHIPGFFLNFGFLLASD 241 (314)
T ss_dssp EEEEEEEGGGTEEEEEEEEES
T ss_pred EEEEEecCCCCCeEEEEEEEC
Confidence 455567888766 677765
No 30
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.64 E-value=7.6e-16 Score=125.47 Aligned_cols=111 Identities=11% Similarity=0.122 Sum_probs=90.0
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||+|||+|..+..+++. + ..+|+++|+++++++.++++++..++.++++++++|+.+.++.. .++|
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~f 101 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL-----TGRF 101 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB-----CSCE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh-----cCCC
Confidence 457789999999999999999986 3 47999999999999999999999888778999999998866544 4679
Q ss_pred eEEEEcCCc--cccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 197 DFAFVDAEK--RMYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 197 DlV~id~~~--~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
|+|+++.+. ......++.+.. .++|+|||++++.....
T Consensus 102 D~i~~~~~~~~~~~~~~~~~l~~-~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 102 DLVFLDPPYAKETIVATIEALAA-KNLLSEQVMVVCETDKT 141 (177)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHH-TTCEEEEEEEEEEEETT
T ss_pred CEEEECCCCCcchHHHHHHHHHh-CCCcCCCcEEEEEECCc
Confidence 999999774 334455566652 24599999999975543
No 31
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.64 E-value=1.6e-15 Score=125.62 Aligned_cols=140 Identities=11% Similarity=0.149 Sum_probs=103.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.|+++++..++.++++++++|+.+..... .++|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~f 94 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI-----DCPV 94 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC-----CSCE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc-----cCCc
Confidence 45678999999999999999999875467999999999999999999999998778999999987653222 5789
Q ss_pred eEEEEcCCc------------cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhhhCCC
Q 023411 197 DFAFVDAEK------------RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDER 264 (282)
Q Consensus 197 DlV~id~~~------------~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (282)
|+|+++... .....+++.+.++ |+|||.+++.. |.+.. ........+.+|.+.+. ..+
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---Lk~gG~l~~~~--~~~~~----~~~~~~~~~~~~~~~l~-~~~ 164 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMEL---LVTGGIITVVI--YYGGD----TGFEEKEKVLEFLKGVD-QKK 164 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHH---EEEEEEEEEEE--CCBTT----TBSHHHHHHHHHHTTSC-TTT
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHh---CcCCCEEEEEE--ccCCC----CcHHHHHHHHHHHHhCC-CCc
Confidence 999988642 1234577888888 99999999854 33321 12233445556654432 235
Q ss_pred eEEEEee
Q 023411 265 VSISMVP 271 (282)
Q Consensus 265 ~~~~~lp 271 (282)
+++....
T Consensus 165 ~~v~~~~ 171 (197)
T 3eey_A 165 FIVQRTD 171 (197)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6665444
No 32
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.64 E-value=1e-15 Score=131.74 Aligned_cols=124 Identities=21% Similarity=0.220 Sum_probs=99.4
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
...+.....+...+...++.+|||||||+|..+..+++.. +.+|+++|+++.+++.++++++..++.++++++++|+.
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA 96 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH
Confidence 3445555555555666788899999999999999999887 47999999999999999999999998878999999997
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
+... .++||+|++..... +....++.+.++ |||||.+++.+..|..
T Consensus 97 ~~~~-------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~---LkpgG~l~~~~~~~~~ 145 (256)
T 1nkv_A 97 GYVA-------NEKCDVAACVGATWIAGGFAGAEELLAQS---LKPGGIMLIGEPYWRQ 145 (256)
T ss_dssp TCCC-------SSCEEEEEEESCGGGTSSSHHHHHHHTTS---EEEEEEEEEEEEEETT
T ss_pred hCCc-------CCCCCEEEECCChHhcCCHHHHHHHHHHH---cCCCeEEEEecCcccC
Confidence 6421 47899999876643 345667777666 9999999997765543
No 33
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.64 E-value=2.2e-15 Score=132.46 Aligned_cols=145 Identities=17% Similarity=0.166 Sum_probs=106.6
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh--CC--------CCcEEEEEcchhhHHHHH
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV--------SHKVKIKHGLAADSLKAL 187 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~--------~~~v~~~~gd~~~~l~~l 187 (282)
..+++|||||||+|..+..+++. + ..+|++||+++.+++.|++++ .. ++ .++++++.+|+.+.++.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 46789999999999999999987 4 689999999999999999988 43 32 46799999999876654
Q ss_pred HhCCCCCceeEEEEcCCcc-----c--cHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHHhh
Q 023411 188 ILNGEASSYDFAFVDAEKR-----M--YQEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLM 260 (282)
Q Consensus 188 ~~~~~~~~fDlV~id~~~~-----~--~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 260 (282)
.++||+|++|.... . ...+++.+.++ |+|||+++++... .. ........+.+.++.+.
T Consensus 150 -----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~---L~pgG~lv~~~~~----~~---~~~~~~~~~~~~l~~~f 214 (281)
T 1mjf_A 150 -----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDA---LNNPGIYVTQAGS----VY---LFTDELISAYKEMKKVF 214 (281)
T ss_dssp -----CCCEEEEEEECCCCC-----TTSHHHHHHHHHH---EEEEEEEEEEEEE----TT---TSHHHHHHHHHHHHHHC
T ss_pred -----cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHh---cCCCcEEEEEcCC----cc---cCHHHHHHHHHHHHHHC
Confidence 37899999997631 1 36788899998 9999999997321 10 01122344555555554
Q ss_pred hCCCeEEEEeecCCc---eEEEEE
Q 023411 261 EDERVSISMVPIGDG---MTICQK 281 (282)
Q Consensus 261 ~~~~~~~~~lp~~~G---l~~~~k 281 (282)
....+....+|..+| +.+|.|
T Consensus 215 ~~v~~~~~~vP~~~g~~~~~~as~ 238 (281)
T 1mjf_A 215 DRVYYYSFPVIGYASPWAFLVGVK 238 (281)
T ss_dssp SEEEEEEECCTTSSSSEEEEEEEE
T ss_pred CceEEEEEecCCCCceEEEEEeeC
Confidence 444455566787655 788876
No 34
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.63 E-value=1e-15 Score=131.84 Aligned_cols=111 Identities=14% Similarity=0.242 Sum_probs=92.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++.+|||||||+|..+..+++..+ ++|+++|+++.+++.+++++...++.++++++++|+.+.. . ..++
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~-----~~~~ 114 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP-F-----QNEE 114 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-S-----CTTC
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-C-----CCCC
Confidence 445678999999999999999999875 5999999999999999999999999989999999996532 1 1479
Q ss_pred eeEEEEcCCccc--cHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 196 YDFAFVDAEKRM--YQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 196 fDlV~id~~~~~--~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
||+|++.....+ ....++.+.++ |+|||++++.+..|..
T Consensus 115 fD~v~~~~~l~~~~~~~~l~~~~~~---L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 115 LDLIWSEGAIYNIGFERGMNEWSKY---LKKGGFIAVSEASWFT 155 (257)
T ss_dssp EEEEEEESCSCCCCHHHHHHHHHTT---EEEEEEEEEEEEEESS
T ss_pred EEEEEecChHhhcCHHHHHHHHHHH---cCCCcEEEEEEeeccC
Confidence 999999876443 55667777777 9999999998876544
No 35
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.62 E-value=1.1e-15 Score=132.84 Aligned_cols=110 Identities=12% Similarity=0.231 Sum_probs=91.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++. + .++|+++|+++.+++.++++++..++.++++++++|+.+.. . ..++|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~----~~~~f 115 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--F----RNEEL 115 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C----CTTCE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--C----CCCCE
Confidence 557889999999999999999987 3 57999999999999999999999999889999999996532 1 14799
Q ss_pred eEEEEcCCccc--cHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKRM--YQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~~--~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|+|++.....+ ...+++.+.++ |+|||++++.+..|..
T Consensus 116 D~i~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~~~ 155 (267)
T 3kkz_A 116 DLIWSEGAIYNIGFERGLNEWRKY---LKKGGYLAVSECSWFT 155 (267)
T ss_dssp EEEEESSCGGGTCHHHHHHHHGGG---EEEEEEEEEEEEEESS
T ss_pred EEEEEcCCceecCHHHHHHHHHHH---cCCCCEEEEEEeeecC
Confidence 99999876443 45567777777 9999999998876543
No 36
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.62 E-value=3.1e-16 Score=134.42 Aligned_cols=110 Identities=18% Similarity=0.181 Sum_probs=88.0
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|.++.++++..+ .+|++||+++++++.|+++....+ .+++++.+|+.+....+. +++||
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~----~~~FD 130 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLP----DGHFD 130 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSC----TTCEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhccccc----ccCCc
Confidence 3667999999999999999988654 689999999999999999887655 358999999976654432 57899
Q ss_pred EEEEcCCcc--------ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 198 FAFVDAEKR--------MYQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 198 lV~id~~~~--------~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
.|+.|.... +...+++++.++ |||||++++.+....+.
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rv---LkPGG~l~f~~~~~~~~ 176 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRL---LKPGGVLTYCNLTSWGE 176 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHH---EEEEEEEEECCHHHHHH
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhhe---eCCCCEEEEEecCCchh
Confidence 999986522 234567778888 99999999988765554
No 37
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.61 E-value=1.2e-14 Score=124.45 Aligned_cols=105 Identities=20% Similarity=0.227 Sum_probs=87.4
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..++.++...+ +++|+++|+++++++.++++++..++.+ ++++++|+.+..... ...++||
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~---~~~~~fD 143 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQRK---DVRESYD 143 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTCT---TTTTCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhcccc---cccCCcc
Confidence 4678999999999999999998655 6899999999999999999999999875 999999996642100 0036899
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|++... .+...+++.+.++ |+|||++++.
T Consensus 144 ~V~~~~~-~~~~~~l~~~~~~---LkpgG~l~~~ 173 (240)
T 1xdz_A 144 IVTARAV-ARLSVLSELCLPL---VKKNGLFVAL 173 (240)
T ss_dssp EEEEECC-SCHHHHHHHHGGG---EEEEEEEEEE
T ss_pred EEEEecc-CCHHHHHHHHHHh---cCCCCEEEEE
Confidence 9999885 5567788888888 9999999884
No 38
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.61 E-value=4.2e-15 Score=133.75 Aligned_cols=113 Identities=21% Similarity=0.362 Sum_probs=91.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
..+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ ..+++++++|+.+.++... .+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~----~~ 193 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAA----EG 193 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSC----TT
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhcc----CC
Confidence 4678999999999999999998654 679999999999999999998753 44 3579999999987655321 36
Q ss_pred ceeEEEEcCCcc----c---cHHHHHHHHHhhcCCCCCcEEEEe-CCCCCCc
Q 023411 195 SYDFAFVDAEKR----M---YQEYFELLLQLLLQIRVGGIIVID-NVLWHGK 238 (282)
Q Consensus 195 ~fDlV~id~~~~----~---~~~~l~~~~~~~~~LkpgG~lv~d-d~~~~g~ 238 (282)
+||+|++|.... . ...+++.+.++ |+|||+++++ +..|.+.
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~---LkpgG~lv~~~~~~~~~~ 242 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARA---LRPGGVVCTQAESLWLHM 242 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHH---EEEEEEEEEECCCTTTCH
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHh---cCCCcEEEEecCCccccH
Confidence 899999986521 1 46789999998 9999999997 5666553
No 39
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.61 E-value=3.9e-15 Score=124.42 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=85.7
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||+|||+|..++.++... ..+|+++|+++.+++.|+++++.+++ ++++++++|+.+.++.. .++||+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~-----~~~fD~ 125 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK-----GTPHNI 125 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC-----CCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc-----CCCCCE
Confidence 67799999999999999877653 25999999999999999999999888 56999999998755421 478999
Q ss_pred EEEcCC--ccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 199 AFVDAE--KRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 199 V~id~~--~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
||++.+ .......++.+.+ .++|+|||++++...
T Consensus 126 V~~~~p~~~~~~~~~l~~l~~-~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 126 VFVDPPFRRGLLEETINLLED-NGWLADEALIYVESE 161 (202)
T ss_dssp EEECCSSSTTTHHHHHHHHHH-TTCEEEEEEEEEEEE
T ss_pred EEECCCCCCCcHHHHHHHHHh-cCccCCCcEEEEEEC
Confidence 999977 2345556666655 345999999988654
No 40
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.61 E-value=1.1e-14 Score=119.28 Aligned_cols=120 Identities=20% Similarity=0.305 Sum_probs=99.9
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.........+.......++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++...++.++++++++|+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 92 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP 92 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHH
Confidence 3445555566666666788899999999999999999864 7999999999999999999999988667999999987
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+.++. .++||+|+++...++...+++.+.++ |+|||.+++...
T Consensus 93 ~~~~~------~~~~D~v~~~~~~~~~~~~l~~~~~~---l~~gG~l~~~~~ 135 (192)
T 1l3i_A 93 EALCK------IPDIDIAVVGGSGGELQEILRIIKDK---LKPGGRIIVTAI 135 (192)
T ss_dssp HHHTT------SCCEEEEEESCCTTCHHHHHHHHHHT---EEEEEEEEEEEC
T ss_pred Hhccc------CCCCCEEEECCchHHHHHHHHHHHHh---cCCCcEEEEEec
Confidence 63332 26899999998877788889999888 999999998654
No 41
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.61 E-value=2.9e-15 Score=125.14 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=85.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHHHHhCCCCCc-e
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASS-Y 196 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~l~~l~~~~~~~~-f 196 (282)
++.+|||+|||+|.+++.++... ..+|+++|+|+++++.|+++++.+++. ++++++++|+.+.++.. ..++ |
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~----~~~~~f 126 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP----QNQPHF 126 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC----CSSCCE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh----ccCCCC
Confidence 67799999999999999877653 269999999999999999999999884 57999999997654321 1367 9
Q ss_pred eEEEEcCCc--cccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 197 DFAFVDAEK--RMYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 197 DlV~id~~~--~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
|+|+++.+. ......++.+.+ .++|+|||++++.....
T Consensus 127 D~I~~~~~~~~~~~~~~l~~~~~-~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 127 DVVFLDPPFHFNLAEQAISLLCE-NNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEEECCCSSSCHHHHHHHHHHH-TTCEEEEEEEEEEEESS
T ss_pred CEEEECCCCCCccHHHHHHHHHh-cCccCCCcEEEEEECCC
Confidence 999999872 334555666633 34599999999865543
No 42
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.60 E-value=5.5e-15 Score=127.42 Aligned_cols=119 Identities=22% Similarity=0.273 Sum_probs=101.0
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+.+.....+...+...++.+|||+|||+|..+..+++.+.+.++++++|+++++++.|+++++..++.++++++++|+.
T Consensus 76 ~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 76 IVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY 155 (255)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG
T ss_pred cccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh
Confidence 45666777777777788899999999999999999999855478999999999999999999999999888999999998
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+.++ .++||+|+++... ...+++.+.++ |+|||.+++..
T Consensus 156 ~~~~-------~~~~D~v~~~~~~--~~~~l~~~~~~---L~~gG~l~~~~ 194 (255)
T 3mb5_A 156 EGIE-------EENVDHVILDLPQ--PERVVEHAAKA---LKPGGFFVAYT 194 (255)
T ss_dssp GCCC-------CCSEEEEEECSSC--GGGGHHHHHHH---EEEEEEEEEEE
T ss_pred hccC-------CCCcCEEEECCCC--HHHHHHHHHHH---cCCCCEEEEEE
Confidence 6432 5789999997653 34568888888 99999999854
No 43
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.60 E-value=7.3e-15 Score=120.23 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=88.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++..+++.++++++++|+.+..+.+... .++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEE--KLQFD 118 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHT--TCCEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhc--CCCCC
Confidence 46779999999999999998873 2 47999999999999999999999998778999999998866543211 37899
Q ss_pred EEEEcCCc--cccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 198 FAFVDAEK--RMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 198 lV~id~~~--~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
+|+++.+. ......+..+.. .++|+|||++++....
T Consensus 119 ~i~~~~~~~~~~~~~~~~~l~~-~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 119 LVLLDPPYAKQEIVSQLEKMLE-RQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEECCCGGGCCHHHHHHHHHH-TTCEEEEEEEEEEEET
T ss_pred EEEECCCCCchhHHHHHHHHHH-hcccCCCCEEEEEeCC
Confidence 99999773 344556666632 4559999999987544
No 44
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.60 E-value=8.3e-15 Score=129.62 Aligned_cols=107 Identities=7% Similarity=0.084 Sum_probs=92.4
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++..+ .+|+++|+|+++++.+++++...++.++++++++|+.+. .++|
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~~f 138 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---------DEPV 138 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---------CCCC
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---------CCCc
Confidence 35678999999999999999999864 799999999999999999999999988899999999764 3899
Q ss_pred eEEEEcCCcccc------------HHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKRMY------------QEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~~~------------~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|+|++....++. ..+++.+.++ |||||.+++.++..+.
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~---LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNL---TPDDGRMLLHTITIPD 188 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHS---SCTTCEEEEEEEECCC
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHh---cCCCcEEEEEEEeccC
Confidence 999987664443 6778888888 9999999998876543
No 45
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.59 E-value=4.2e-15 Score=128.87 Aligned_cols=114 Identities=15% Similarity=0.139 Sum_probs=93.7
Q ss_pred HHHHHHHHhhc-CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH
Q 023411 108 AQLLAMLVQIL-GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 186 (282)
Q Consensus 108 ~~ll~~l~~~~-~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~ 186 (282)
+.++..++... ++.+|||+|||+|..++.+++..+ ++|+++|+++.+++.|++++..+++.++++++++|+.+....
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh
Confidence 45566666666 788999999999999999998754 499999999999999999999999998999999999876432
Q ss_pred HHhCCCCCceeEEEEcCCcc-----------------------ccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 187 LILNGEASSYDFAFVDAEKR-----------------------MYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 187 l~~~~~~~~fDlV~id~~~~-----------------------~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+. .++||+|+++.+.. ....+++.+.++ |+|||.+++
T Consensus 115 ~~----~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~---LkpgG~l~~ 174 (259)
T 3lpm_A 115 IP----KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASL---LKQGGKANF 174 (259)
T ss_dssp SC----TTCEEEEEECCCC-----------------------HHHHHHHHHHHHH---EEEEEEEEE
T ss_pred hc----cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHH---ccCCcEEEE
Confidence 21 47999999975521 124577788888 999999998
No 46
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.59 E-value=8.9e-15 Score=123.90 Aligned_cols=105 Identities=18% Similarity=0.228 Sum_probs=87.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
+..+|||||||+|.++..+++..| +.+|+|||+++.+++.|+++++..++.+ ++++++|+.+.++.... +++||.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~~---~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMIP---DNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHSC---TTCEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHcC---CCChhe
Confidence 567999999999999999999887 6899999999999999999999998875 99999999887664221 579999
Q ss_pred EEEc---CCcc--c------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 199 AFVD---AEKR--M------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 199 V~id---~~~~--~------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|++. .+.. + ...+++.+.++ |||||++++.
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~---LkpGG~l~i~ 149 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSK---LQLGGVFHMA 149 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHH---EEEEEEEEEE
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHH---cCCCcEEEEE
Confidence 9986 2221 1 13588999998 9999999874
No 47
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.59 E-value=5.5e-15 Score=123.62 Aligned_cols=105 Identities=19% Similarity=0.235 Sum_probs=89.0
Q ss_pred EEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEE
Q 023411 122 RCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFV 201 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~i 201 (282)
+|||+|||+|..+..+++. + +.+++++|+++.+++.+++++...++.++++++++|+.+.. . ..++||+|++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~----~~~~~D~v~~ 117 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--I----EDNYADLIVS 117 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--S----CTTCEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--C----CcccccEEEE
Confidence 9999999999999999997 3 57999999999999999999999998888999999997632 1 1479999999
Q ss_pred cCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 202 DAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 202 d~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
..... +....++.+.++ |+|||.+++.+...+.
T Consensus 118 ~~~l~~~~~~~~~l~~~~~~---L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 118 RGSVFFWEDVATAFREIYRI---LKSGGKTYIGGGFGNK 153 (219)
T ss_dssp ESCGGGCSCHHHHHHHHHHH---EEEEEEEEEEECCSSH
T ss_pred CchHhhccCHHHHHHHHHHh---CCCCCEEEEEeccCcH
Confidence 87644 346678888888 9999999998755443
No 48
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.58 E-value=9.7e-15 Score=127.99 Aligned_cols=106 Identities=15% Similarity=0.211 Sum_probs=87.4
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
..+++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++... ++ .++++++.+|+.+.++.. .+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-----~~ 147 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-----EN 147 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-----CS
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-----CC
Confidence 3578999999999999999998643 579999999999999999988652 34 468999999998776542 47
Q ss_pred ceeEEEEcCCccc-------cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 195 SYDFAFVDAEKRM-------YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 195 ~fDlV~id~~~~~-------~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+||+|++|..... ...+++.+.+. |+|||++++..
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~---L~pgG~lv~~~ 189 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKA---LKEDGIFVAQT 189 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHH---EEEEEEEEEEC
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHh---cCCCcEEEEEc
Confidence 8999999876321 25789999998 99999999974
No 49
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.58 E-value=3.6e-15 Score=130.76 Aligned_cols=107 Identities=9% Similarity=0.076 Sum_probs=90.3
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++..+ .+|+++|+++++++.+++++...++.++++++++|+.+. .++|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---------~~~f 130 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF---------DEPV 130 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC---------CCCC
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC---------CCCe
Confidence 35677999999999999999996654 699999999999999999999888888899999998643 3789
Q ss_pred eEEEEcCCc-----cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEK-----RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~-----~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|+|++.... .+...+++.+.++ |||||.+++.+.....
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRL---LPADGVMLLHTITGLH 173 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHH---SCTTCEEEEEEEEECC
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHh---cCCCCEEEEEEecCCC
Confidence 999987653 3456788888888 9999999998776543
No 50
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.57 E-value=5.8e-15 Score=131.49 Aligned_cols=107 Identities=7% Similarity=0.057 Sum_probs=90.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++.. +.+|+++|+++++++.+++++...++.++++++++|+.+. +++|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~~f 156 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF---------AEPV 156 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC---------CCCC
T ss_pred CCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC---------CCCc
Confidence 3467799999999999999999875 3699999999999999999999988888899999998653 3789
Q ss_pred eEEEEcCCc-----cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEK-----RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~-----~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|+|++.... .+...+++.+.++ |+|||.+++.+.....
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCFNI---MPADGRMTVQSSVSYH 199 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHHHH---SCTTCEEEEEEEECCC
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHHHh---cCCCcEEEEEEeccCC
Confidence 999987653 3456788888888 9999999998776544
No 51
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.57 E-value=2.7e-14 Score=117.04 Aligned_cols=108 Identities=15% Similarity=0.194 Sum_probs=88.7
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC-cEEEEEcchhhHHHHHHhCC
Q 023411 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNG 191 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-~v~~~~gd~~~~l~~l~~~~ 191 (282)
..+...++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...++.+ +++++++|+.+..+
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~------ 116 (194)
T 1dus_A 46 ENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK------ 116 (194)
T ss_dssp HHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT------
T ss_pred HHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc------
Confidence 3334456779999999999999999987 4799999999999999999999888775 69999999876432
Q ss_pred CCCceeEEEEcCCcc----ccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 192 EASSYDFAFVDAEKR----MYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 192 ~~~~fDlV~id~~~~----~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.++||+|+++.... ....+++.+.++ |+|||.+++...
T Consensus 117 -~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~---L~~gG~l~~~~~ 158 (194)
T 1dus_A 117 -DRKYNKIITNPPIRAGKEVLHRIIEEGKEL---LKDNGEIWVVIQ 158 (194)
T ss_dssp -TSCEEEEEECCCSTTCHHHHHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred -cCCceEEEECCCcccchhHHHHHHHHHHHH---cCCCCEEEEEEC
Confidence 47899999987643 345677778888 999999998654
No 52
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.57 E-value=4.3e-14 Score=113.83 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=86.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||+|||+|..+..+++..+ +|+++|+++++++.+++++...++ +++++++|+.+.++..... .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~--~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQ--GERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHT--TCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhcc--CCceEE
Confidence 677999999999999999998643 599999999999999999999887 6999999998865544321 248999
Q ss_pred EEEcCCc-cccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 199 AFVDAEK-RMYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 199 V~id~~~-~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
|+++.+. ......++.+.+ .++|+|||++++.....
T Consensus 114 i~~~~~~~~~~~~~~~~~~~-~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 114 AFMAPPYAMDLAALFGELLA-SGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEECCCTTSCTTHHHHHHHH-HTCEEEEEEEEEEEETT
T ss_pred EEECCCCchhHHHHHHHHHh-hcccCCCcEEEEEeCCc
Confidence 9999754 445566777762 24499999999865543
No 53
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.57 E-value=2.8e-14 Score=120.22 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=86.0
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|.++..+++..| +.+|+|+|+++.+++.|++++...++. +++++++|+.+....+. .++||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~~----~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVFE----PGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHCC----TTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcC----cCCcCE
Confidence 567999999999999999999876 789999999999999999999998885 49999999987432221 468999
Q ss_pred EEEcCC---cc--c------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 199 AFVDAE---KR--M------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 199 V~id~~---~~--~------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|++... .. + ...+++.+.++ |+|||.+++.
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~---LkpgG~l~~~ 152 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEV---MGKGGSIHFK 152 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHH---HTTSCEEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHH---cCCCCEEEEE
Confidence 987532 11 1 46788999998 9999999884
No 54
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.57 E-value=2.1e-14 Score=120.72 Aligned_cols=104 Identities=16% Similarity=0.194 Sum_probs=86.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|.++..+++..| +.+++++|+++.+++.|++++...++. +++++++|+.+....+ ..++||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~----~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVP-NIKLLWVDGSDLTDYF----EDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCS-SEEEEECCSSCGGGTS----CTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhc----CCCCCCE
Confidence 567999999999999999999887 789999999999999999999999884 6999999997632111 1468999
Q ss_pred EEEcCCcc-----------ccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 199 AFVDAEKR-----------MYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 199 V~id~~~~-----------~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|+++.... ....+++.+.++ |+|||++++.
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~ 155 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRI---LPENGEIHFK 155 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHH---SCTTCEEEEE
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHH---cCCCcEEEEE
Confidence 99875532 235788999998 9999999884
No 55
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=9.8e-15 Score=126.85 Aligned_cols=119 Identities=20% Similarity=0.264 Sum_probs=94.9
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHH---hCCCCcEEEEEcchhhHH
Q 023411 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER---AGVSHKVKIKHGLAADSL 184 (282)
Q Consensus 108 ~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~---~g~~~~v~~~~gd~~~~l 184 (282)
+.++..++...++.+|||+|||+|..++.++...+ +.+|+++|+++++++.|++++.. +++.++++++++|+.+..
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRA 103 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCH
T ss_pred HHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHh
Confidence 44555666666778999999999999999999886 68999999999999999999998 888888999999998764
Q ss_pred HHHHhC-CCCCceeEEEEcCCcc---------------------ccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 185 KALILN-GEASSYDFAFVDAEKR---------------------MYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 185 ~~l~~~-~~~~~fDlV~id~~~~---------------------~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+..... ...++||+|+++.+.. ....+++.+.++ |+|||.+++
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~---LkpgG~l~~ 168 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAI---MVSGGQLSL 168 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHH---EEEEEEEEE
T ss_pred hhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHH---cCCCCEEEE
Confidence 422111 1247899999985421 245677888888 999999987
No 56
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.56 E-value=1.3e-14 Score=121.32 Aligned_cols=113 Identities=20% Similarity=0.310 Sum_probs=93.7
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
..+.....+...+...++.+|||||||+|..+..+++. +++|+++|+++++++.++++++..++. +++++++|+.+
T Consensus 61 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 136 (210)
T 3lbf_A 61 SQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQ 136 (210)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGG
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCccc
Confidence 45666666666667778899999999999999999987 479999999999999999999998887 59999999976
Q ss_pred HHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
..+. .++||+|+++...++..+ .+.++ |+|||++++.
T Consensus 137 ~~~~------~~~~D~i~~~~~~~~~~~---~~~~~---L~pgG~lv~~ 173 (210)
T 3lbf_A 137 GWQA------RAPFDAIIVTAAPPEIPT---ALMTQ---LDEGGILVLP 173 (210)
T ss_dssp CCGG------GCCEEEEEESSBCSSCCT---HHHHT---EEEEEEEEEE
T ss_pred CCcc------CCCccEEEEccchhhhhH---HHHHh---cccCcEEEEE
Confidence 4332 479999999977665543 46677 9999999985
No 57
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.56 E-value=4.5e-14 Score=131.90 Aligned_cols=145 Identities=16% Similarity=0.241 Sum_probs=108.6
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
+......++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..|+. ++++++|+.+
T Consensus 85 vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~ 162 (464)
T 3m6w_A 85 IQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRA 162 (464)
T ss_dssp ECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHH
T ss_pred EECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHH
Confidence 34444556666777778899999999999999999999876689999999999999999999999986 9999999987
Q ss_pred HHHHHHhCCCCCceeEEEEcCCcc---------c----------------cHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 183 SLKALILNGEASSYDFAFVDAEKR---------M----------------YQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~~~---------~----------------~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
..... .++||+|++|++.. + ....++.+.++ |||||+||....-+..
T Consensus 163 l~~~~-----~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~---LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 163 LAEAF-----GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRL---LGPGGVLVYSTCTFAP 234 (464)
T ss_dssp HHHHH-----CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTT---EEEEEEEEEEESCCCG
T ss_pred hhhhc-----cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHh---cCCCcEEEEEeccCch
Confidence 65434 58999999987631 1 14455666666 9999999987654332
Q ss_pred cccCCcCCChhhHHHHHHHHHhhhCCCeEEE
Q 023411 238 KVADQMVNDAKTISIRNFNKNLMEDERVSIS 268 (282)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (282)
. ++..-+..|++ +.|+++..
T Consensus 235 e--------Ene~vv~~~l~---~~~~~~l~ 254 (464)
T 3m6w_A 235 E--------ENEGVVAHFLK---AHPEFRLE 254 (464)
T ss_dssp G--------GTHHHHHHHHH---HCTTEEEE
T ss_pred h--------cCHHHHHHHHH---HCCCcEEE
Confidence 2 23344566654 34555443
No 58
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.56 E-value=6e-14 Score=122.77 Aligned_cols=145 Identities=15% Similarity=0.183 Sum_probs=107.1
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH
Q 023411 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (282)
Q Consensus 108 ~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l 187 (282)
..++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..|+. +++++++|+.+.....
T Consensus 72 s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 72 SMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYL 150 (274)
T ss_dssp GGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHH
T ss_pred HHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhh
Confidence 344555666678889999999999999999998864489999999999999999999999987 6999999998764432
Q ss_pred HhCCCCCceeEEEEcCCc---------------------cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCC
Q 023411 188 ILNGEASSYDFAFVDAEK---------------------RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVND 246 (282)
Q Consensus 188 ~~~~~~~~fDlV~id~~~---------------------~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~ 246 (282)
... .++||+|++|.+. .....+++.+.++ |||||.+++........
T Consensus 151 ~~~--~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~lv~stcs~~~~-------- 217 (274)
T 3ajd_A 151 LKN--EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDL---LKKDGELVYSTCSMEVE-------- 217 (274)
T ss_dssp HHT--TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHH---EEEEEEEEEEESCCCTT--------
T ss_pred hhc--cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEECCCChH--------
Confidence 111 3689999999542 2235677888888 99999999976543322
Q ss_pred hhhHHHHHHHHHhhhCCCeEEEE
Q 023411 247 AKTISIRNFNKNLMEDERVSISM 269 (282)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~ 269 (282)
++..-++.|++ +.++++..-
T Consensus 218 ene~~v~~~l~---~~~~~~~~~ 237 (274)
T 3ajd_A 218 ENEEVIKYILQ---KRNDVELII 237 (274)
T ss_dssp SSHHHHHHHHH---HCSSEEEEC
T ss_pred HhHHHHHHHHH---hCCCcEEec
Confidence 11233455553 456666543
No 59
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.56 E-value=2e-14 Score=127.28 Aligned_cols=105 Identities=15% Similarity=0.325 Sum_probs=85.1
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHH--hCC-CCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~-~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
..+.+|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++.. .++ .++++++++|+.+.++.. .+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-----~~ 162 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-----KN 162 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC-----SS
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-----CC
Confidence 3568999999999999999998654 58999999999999999999865 233 457999999998754432 47
Q ss_pred ceeEEEEcCCcc--------ccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 195 SYDFAFVDAEKR--------MYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 195 ~fDlV~id~~~~--------~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+||+|++|.... ....+++.+.++ |+|||++++.
T Consensus 163 ~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~---LkpgG~lv~~ 204 (296)
T 1inl_A 163 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDA---LKEDGVFSAE 204 (296)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHH---EEEEEEEEEE
T ss_pred CceEEEEcCCCcccCchhhhhHHHHHHHHHHh---cCCCcEEEEE
Confidence 899999986533 236788899898 9999999996
No 60
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.56 E-value=3.8e-14 Score=118.12 Aligned_cols=103 Identities=11% Similarity=0.201 Sum_probs=87.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++...++.+ ++++++|+.+.. .++||
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--------~~~fD 127 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV--------DGKFD 127 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC--------CSCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC--------CCCce
Confidence 46779999999999999998874 3 4699999999999999999999998876 999999987632 57999
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
+|+++...+....+++.+.++ |+|||++++.+..
T Consensus 128 ~i~~~~~~~~~~~~l~~~~~~---L~~gG~l~~~~~~ 161 (205)
T 3grz_A 128 LIVANILAEILLDLIPQLDSH---LNEDGQVIFSGID 161 (205)
T ss_dssp EEEEESCHHHHHHHGGGSGGG---EEEEEEEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHh---cCCCCEEEEEecC
Confidence 999998877666677777777 9999999996543
No 61
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.56 E-value=1.1e-14 Score=126.55 Aligned_cols=110 Identities=16% Similarity=0.217 Sum_probs=90.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++.. +++|+++|+++.+++.+++++...++.++++++++|+.+.. . ..++|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~-----~~~~f 130 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-F-----EDASF 130 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-S-----CTTCE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-C-----CCCCc
Confidence 4567899999999999999999875 48999999999999999999999998888999999987631 1 14789
Q ss_pred eEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|+|++..... +...+++.+.++ |+|||.+++.+....+
T Consensus 131 D~v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~i~~~~~~~ 171 (273)
T 3bus_A 131 DAVWALESLHHMPDRGRALREMARV---LRPGGTVAIADFVLLA 171 (273)
T ss_dssp EEEEEESCTTTSSCHHHHHHHHHTT---EEEEEEEEEEEEEESS
T ss_pred cEEEEechhhhCCCHHHHHHHHHHH---cCCCeEEEEEEeeccC
Confidence 9999876643 345667777777 9999999998876543
No 62
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.55 E-value=1.6e-13 Score=111.38 Aligned_cols=114 Identities=18% Similarity=0.225 Sum_probs=91.7
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
..+.....+.......++.+|||+|||+|..+..+++ + ..+++++|+++.+++.++++++.+++. +++++++|+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~ 94 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAED 94 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccc
Confidence 3344444555555566778999999999999999998 3 689999999999999999999998874 59999999976
Q ss_pred HHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.++ .++||+|+++.. .....+++.+.+ + |||.+++...
T Consensus 95 ~~~-------~~~~D~i~~~~~-~~~~~~l~~~~~----~-~gG~l~~~~~ 132 (183)
T 2yxd_A 95 VLD-------KLEFNKAFIGGT-KNIEKIIEILDK----K-KINHIVANTI 132 (183)
T ss_dssp HGG-------GCCCSEEEECSC-SCHHHHHHHHHH----T-TCCEEEEEES
T ss_pred ccc-------CCCCcEEEECCc-ccHHHHHHHHhh----C-CCCEEEEEec
Confidence 322 368999999988 666777777765 4 9999999764
No 63
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.55 E-value=1.5e-14 Score=125.03 Aligned_cols=103 Identities=24% Similarity=0.358 Sum_probs=86.9
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|..++.++...+ +++|+++|+++.+++.++++++..++.+ ++++++|+.+.... ....++||+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~---~~~~~~fD~ 154 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLARE---AGHREAYAR 154 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTS---TTTTTCEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcc---cccCCCceE
Confidence 578999999999999999999876 7899999999999999999999999976 99999999764321 001379999
Q ss_pred EEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 199 AFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 199 V~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|++.+.. ....+++.+.++ |+|||.+++
T Consensus 155 I~s~a~~-~~~~ll~~~~~~---LkpgG~l~~ 182 (249)
T 3g89_A 155 AVARAVA-PLCVLSELLLPF---LEVGGAAVA 182 (249)
T ss_dssp EEEESSC-CHHHHHHHHGGG---EEEEEEEEE
T ss_pred EEECCcC-CHHHHHHHHHHH---cCCCeEEEE
Confidence 9998763 456778888888 999999887
No 64
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.55 E-value=1.6e-14 Score=127.79 Aligned_cols=106 Identities=15% Similarity=0.214 Sum_probs=83.8
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC---C-CCcEEEEEcchhhHHHHHHhCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG---V-SHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g---~-~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
..+++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ + ..+++++.+|+.+.++.. .
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-----~ 155 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-----S 155 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-----C
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-----C
Confidence 4678999999999999999998644 6799999999999999999987652 2 357999999998776532 5
Q ss_pred CceeEEEEcCCccc-------cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRM-------YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~-------~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
++||+|++|..... ...+++.+.+. |+|||++++..
T Consensus 156 ~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~---LkpgG~lv~~~ 198 (294)
T 3adn_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRC---LNPGGIFVAQN 198 (294)
T ss_dssp CCEEEEEECC----------CCHHHHHHHHHT---EEEEEEEEEEE
T ss_pred CCccEEEECCCCccCcchhccHHHHHHHHHHh---cCCCCEEEEec
Confidence 78999999865321 26688888888 99999999863
No 65
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.55 E-value=7.5e-14 Score=117.23 Aligned_cols=114 Identities=14% Similarity=0.155 Sum_probs=93.1
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 114 LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 114 l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
.....++.+|||+|||+|..+..+++..++.++|+++|+++.+++.+++++...++. +++++++|+.+.. . ..
T Consensus 32 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~----~~ 104 (219)
T 3dh0_A 32 EFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP--L----PD 104 (219)
T ss_dssp HHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS--S----CS
T ss_pred HhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC--C----CC
Confidence 334556789999999999999999998754689999999999999999999998877 5999999987542 1 15
Q ss_pred CceeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 194 SSYDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 194 ~~fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
++||+|++..... +...+++.+.++ |+|||.+++.+.....
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~---LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRV---AKPFAYLAIIDWKKEE 148 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHH---EEEEEEEEEEEECSSC
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHH---hCCCeEEEEEEecccc
Confidence 7899999987744 346678888888 9999999997655443
No 66
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.55 E-value=8.2e-14 Score=124.38 Aligned_cols=125 Identities=17% Similarity=0.218 Sum_probs=101.2
Q ss_pred CccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch
Q 023411 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (282)
Q Consensus 101 ~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (282)
..+......++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..|+.+ ++++++|+
T Consensus 100 ~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~-v~~~~~D~ 178 (315)
T 1ixk_A 100 IYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLN-VILFHSSS 178 (315)
T ss_dssp EEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCS-EEEESSCG
T ss_pred EEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCe-EEEEECCh
Confidence 34556666677777777888999999999999999999988656899999999999999999999999874 99999999
Q ss_pred hhHHHHHHhCCCCCceeEEEEcCCccc-------------------------cHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 181 ADSLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 181 ~~~l~~l~~~~~~~~fDlV~id~~~~~-------------------------~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
.+... . .++||+|++|.+... ...+++.+.++ |||||++++.....
T Consensus 179 ~~~~~-~-----~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~---LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 179 LHIGE-L-----NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEV---LKPGGILVYSTCSL 249 (315)
T ss_dssp GGGGG-G-----CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHH---EEEEEEEEEEESCC
T ss_pred hhccc-c-----cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEeCCC
Confidence 76532 2 478999999865210 13567777777 99999999976543
No 67
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.54 E-value=3.5e-14 Score=127.10 Aligned_cols=106 Identities=21% Similarity=0.342 Sum_probs=87.1
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHH--hCC-CCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~-~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
..+++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++.. .++ .++++++++|+.+.++.. .+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-----~~ 188 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-----TN 188 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-----CS
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-----CC
Confidence 4678999999999999999998644 68999999999999999999875 233 457999999998766543 57
Q ss_pred ceeEEEEcCCcc-----c-c-HHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 195 SYDFAFVDAEKR-----M-Y-QEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 195 ~fDlV~id~~~~-----~-~-~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+||+|++|.... . + ..+++.+.+. |+|||++++..
T Consensus 189 ~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~---LkpgG~lv~~~ 230 (321)
T 2pt6_A 189 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNA---LKPNGYCVAQC 230 (321)
T ss_dssp CEEEEEEECCCSSSGGGGGSSHHHHHHHHHH---EEEEEEEEEEE
T ss_pred CceEEEECCcCCCCcchhhhHHHHHHHHHHh---cCCCcEEEEEc
Confidence 899999987411 1 1 6788999998 99999999963
No 68
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.54 E-value=4.7e-14 Score=119.58 Aligned_cols=135 Identities=15% Similarity=0.179 Sum_probs=97.3
Q ss_pred hcCCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 117 ILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 117 ~~~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
..++.+|||+||| +|..+..+++.. +.+|+++|+++.+++.|++++..+++ +++++++|+....+ +. .++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-~~----~~~ 123 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKG-VV----EGT 123 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTT-TC----CSC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhh-cc----cCc
Confidence 4578899999999 999999999875 47999999999999999999999888 69999999642211 11 479
Q ss_pred eeEEEEcCCccc----------------------cHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHH
Q 023411 196 YDFAFVDAEKRM----------------------YQEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIR 253 (282)
Q Consensus 196 fDlV~id~~~~~----------------------~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~ 253 (282)
||+|+++.+... +..+++.+.++ |+|||.+++--. .+. ....
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~--~~~-----------~~~~ 187 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDH---LNPGGKVALYLP--DKE-----------KLLN 187 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGG---EEEEEEEEEEEE--SCH-----------HHHH
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHH---hCCCeEEEEEec--ccH-----------hHHH
Confidence 999999855221 25567777777 999999988311 110 1233
Q ss_pred HHHHHhhhCCCeEEEEeecCCceE
Q 023411 254 NFNKNLMEDERVSISMVPIGDGMT 277 (282)
Q Consensus 254 ~~~~~~~~~~~~~~~~lp~~~Gl~ 277 (282)
++.+.+.+. +++...+.+..|..
T Consensus 188 ~~~~~l~~~-g~~~~~~~~~~g~~ 210 (230)
T 3evz_A 188 VIKERGIKL-GYSVKDIKFKVGTR 210 (230)
T ss_dssp HHHHHHHHT-TCEEEEEEECCCC-
T ss_pred HHHHHHHHc-CCceEEEEecCCCe
Confidence 444444333 67777777766644
No 69
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.54 E-value=1.5e-14 Score=120.58 Aligned_cols=96 Identities=22% Similarity=0.288 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHhh----cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc
Q 023411 104 SPDQAQLLAMLVQI----LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (282)
Q Consensus 104 ~~~~~~ll~~l~~~----~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (282)
.+....++..+... .++.+|||+|||+|..+..+++..+ +.+++++|+++.+++.+++++...+. +++++++|
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 87 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAAD 87 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcc
Confidence 44455555555443 5678999999999999999999875 67999999999999999999988777 69999999
Q ss_pred hhhHHHHHHhCCCCCceeEEEEcCC
Q 023411 180 AADSLKALILNGEASSYDFAFVDAE 204 (282)
Q Consensus 180 ~~~~l~~l~~~~~~~~fDlV~id~~ 204 (282)
+.+.++..... .++||+|+++.+
T Consensus 88 ~~~~~~~~~~~--~~~fD~i~~npp 110 (215)
T 4dzr_A 88 GIEWLIERAER--GRPWHAIVSNPP 110 (215)
T ss_dssp HHHHHHHHHHT--TCCBSEEEECCC
T ss_pred hHhhhhhhhhc--cCcccEEEECCC
Confidence 98754431111 379999999754
No 70
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.53 E-value=6.3e-14 Score=122.55 Aligned_cols=119 Identities=16% Similarity=0.233 Sum_probs=94.9
Q ss_pred ccCHHHHHHHHHHHhh--cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc
Q 023411 102 QVSPDQAQLLAMLVQI--LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~--~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (282)
...+....++..+... .++.+|||+|||+|..+..++...+ +.+|+++|+|+.+++.++++++..++. +++++++|
T Consensus 90 ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d 167 (276)
T 2b3t_A 90 IPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSD 167 (276)
T ss_dssp CCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCS
T ss_pred ccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcc
Confidence 3456666676666655 4677999999999999999998876 689999999999999999999999886 59999999
Q ss_pred hhhHHHHHHhCCCCCceeEEEEcCCc----------------------------cccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 180 AADSLKALILNGEASSYDFAFVDAEK----------------------------RMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 180 ~~~~l~~l~~~~~~~~fDlV~id~~~----------------------------~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+.+..+ .++||+|+++.+. ..+..+++.+.++ |+|||++++.
T Consensus 168 ~~~~~~-------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~---LkpgG~l~~~ 237 (276)
T 2b3t_A 168 WFSALA-------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNA---LVSGGFLLLE 237 (276)
T ss_dssp TTGGGT-------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGG---EEEEEEEEEE
T ss_pred hhhhcc-------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHh---cCCCCEEEEE
Confidence 976432 4689999998542 1234455666666 9999999996
Q ss_pred C
Q 023411 232 N 232 (282)
Q Consensus 232 d 232 (282)
.
T Consensus 238 ~ 238 (276)
T 2b3t_A 238 H 238 (276)
T ss_dssp C
T ss_pred E
Confidence 3
No 71
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.53 E-value=2e-14 Score=126.87 Aligned_cols=114 Identities=18% Similarity=0.304 Sum_probs=86.7
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCC----------------------------
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS---------------------------- 170 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~---------------------------- 170 (282)
++++|||||||+|..+..++..++ ..+|+|+|+++.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 578999999999999999999986 579999999999999999987765432
Q ss_pred -----------------------------CcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCcc---------ccHHHH
Q 023411 171 -----------------------------HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR---------MYQEYF 212 (282)
Q Consensus 171 -----------------------------~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~---------~~~~~l 212 (282)
++++++++|+.+....+... ..++||+|++..... ....++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~-~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEA-QTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTT-CCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccc-cCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 57999999987533222111 158999999987642 345577
Q ss_pred HHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 213 ELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 213 ~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
+.+.++ |+|||+|++...-|..
T Consensus 204 ~~~~~~---LkpGG~lil~~~~~~~ 225 (292)
T 3g07_A 204 RRIYRH---LRPGGILVLEPQPWSS 225 (292)
T ss_dssp HHHHHH---EEEEEEEEEECCCHHH
T ss_pred HHHHHH---hCCCcEEEEecCCchh
Confidence 777777 9999999998766553
No 72
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.53 E-value=9.6e-14 Score=129.45 Aligned_cols=125 Identities=17% Similarity=0.218 Sum_probs=100.5
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+......++..++...++.+|||+|||+|..|..++..++..++|+++|+++.+++.++++++..|+.+ +.++++|+.
T Consensus 88 ~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n-v~v~~~Da~ 166 (456)
T 3m4x_A 88 YSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN-AIVTNHAPA 166 (456)
T ss_dssp EECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS-EEEECCCHH
T ss_pred EEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEeCCHH
Confidence 4444555667777777888999999999999999999988756899999999999999999999999975 999999998
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccc-------------------------cHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~-------------------------~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
+..... .++||+|++|++... ....++.+.++ |||||+||.....+
T Consensus 167 ~l~~~~-----~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~---LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 167 ELVPHF-----SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKM---LKNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHH-----TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHT---EEEEEEEEEEESCC
T ss_pred Hhhhhc-----cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHh---cCCCcEEEEEEeec
Confidence 765444 589999999976210 11455666666 99999999876543
No 73
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.53 E-value=3.2e-14 Score=127.04 Aligned_cols=116 Identities=26% Similarity=0.372 Sum_probs=94.8
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 023411 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (282)
Q Consensus 104 ~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (282)
.+.....+...+...++.+|||||||+|..+..+++..+..++|+++|+++++++.|+++++..++.+ ++++++|+.+.
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~ 138 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYG 138 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhc
Confidence 44445555555666788899999999999999999987645789999999999999999999998876 99999999764
Q ss_pred HHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 184 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 184 l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+. .++||+|+++...++.. +.+.++ |||||++++..
T Consensus 139 ~~~------~~~fD~Iv~~~~~~~~~---~~~~~~---LkpgG~lvi~~ 175 (317)
T 1dl5_A 139 VPE------FSPYDVIFVTVGVDEVP---ETWFTQ---LKEGGRVIVPI 175 (317)
T ss_dssp CGG------GCCEEEEEECSBBSCCC---HHHHHH---EEEEEEEEEEB
T ss_pred ccc------CCCeEEEEEcCCHHHHH---HHHHHh---cCCCcEEEEEE
Confidence 331 47899999998866554 466777 99999999964
No 74
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.53 E-value=3.6e-13 Score=121.03 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=87.8
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC-cEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
.++.+|||+|||+|.+++.++.. +.+|+++|+|+.+++.|+++++.+++.+ +++++++|+.+.++..... .++|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~--~~~f 226 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR--GSTY 226 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH--TCCB
T ss_pred CCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc--CCCc
Confidence 35679999999999999999984 3599999999999999999999999876 5999999998876543211 3689
Q ss_pred eEEEEcCCc-c------------ccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 197 DFAFVDAEK-R------------MYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 197 DlV~id~~~-~------------~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|+|++|.+. . .+..+++.+.++ |+|||++++....
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~---LkpgG~lli~~~~ 274 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREI---LSPKALGLVLTAY 274 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHT---BCTTCCEEEEEEC
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHh---cCcCcEEEEEECC
Confidence 999998762 1 244566666677 9999998776554
No 75
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.53 E-value=1.4e-13 Score=121.15 Aligned_cols=117 Identities=15% Similarity=0.368 Sum_probs=93.1
Q ss_pred ccCHHHHHHHHHHHh---hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc
Q 023411 102 QVSPDQAQLLAMLVQ---ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 178 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~---~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g 178 (282)
...+....++..+.. ..++.+|||+|||+|.+++.++.. + +.+|+++|+|+++++.|+++++.+++.++++++++
T Consensus 103 ipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~ 180 (284)
T 1nv8_A 103 VPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG 180 (284)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES
T ss_pred ecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 345566666655544 236679999999999999999998 5 78999999999999999999999999888999999
Q ss_pred chhhHHHHHHhCCCCCce---eEEEEcCCccc----------------------cHHHHHHHH-HhhcCCCCCcEEEEe
Q 023411 179 LAADSLKALILNGEASSY---DFAFVDAEKRM----------------------YQEYFELLL-QLLLQIRVGGIIVID 231 (282)
Q Consensus 179 d~~~~l~~l~~~~~~~~f---DlV~id~~~~~----------------------~~~~l~~~~-~~~~~LkpgG~lv~d 231 (282)
|+.+.+ .++| |+|+++.+... -..+++.+. +. |+|||++++.
T Consensus 181 D~~~~~--------~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~---l~pgG~l~~e 248 (284)
T 1nv8_A 181 EFLEPF--------KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRY---DTSGKIVLME 248 (284)
T ss_dssp STTGGG--------GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHC---CCTTCEEEEE
T ss_pred cchhhc--------ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhc---CCCCCEEEEE
Confidence 998743 2468 99999854211 114566776 77 9999999985
No 76
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.53 E-value=4.9e-15 Score=126.68 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=87.5
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHh
Q 023411 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (282)
Q Consensus 110 ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~ 189 (282)
++..+....++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++++..++.++++++++|+.+..+
T Consensus 69 l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---- 141 (241)
T 3gdh_A 69 IAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS---- 141 (241)
T ss_dssp HHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG----
T ss_pred HHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc----
Confidence 3344444557889999999999999999985 479999999999999999999999987679999999977542
Q ss_pred CCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 190 NGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.++||+|+++.+.......-..+..+.++|+|||+++++.
T Consensus 142 ---~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 ---FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp ---GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred ---cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 5799999999775443221112223344499999987764
No 77
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=3.6e-14 Score=124.09 Aligned_cols=108 Identities=9% Similarity=0.089 Sum_probs=91.7
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 114 LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 114 l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
+....++.+|||+|||+|.+++.+++..+ .++|+++|+++.+++.|+++++.+++.+ ++++++|+.+. +. .
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d~~~~-~~------~ 184 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADNRDV-EL------K 184 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESCGGGC-CC------T
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECChHHc-Cc------c
Confidence 33455778999999999999999999875 6799999999999999999999999875 88999999875 32 3
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
++||+|++|.+. ....++..+.+. |+|||++++....
T Consensus 185 ~~~D~Vi~d~p~-~~~~~l~~~~~~---LkpgG~l~~s~~~ 221 (272)
T 3a27_A 185 DVADRVIMGYVH-KTHKFLDKTFEF---LKDRGVIHYHETV 221 (272)
T ss_dssp TCEEEEEECCCS-SGGGGHHHHHHH---EEEEEEEEEEEEE
T ss_pred CCceEEEECCcc-cHHHHHHHHHHH---cCCCCEEEEEEcC
Confidence 689999999875 556678888888 9999999987654
No 78
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.52 E-value=4.2e-14 Score=124.54 Aligned_cols=111 Identities=14% Similarity=0.214 Sum_probs=92.5
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++.+|||||||+|..+..+++.. +.+|+++|+++.+++.++++....++.++++++++|+.+.. . .+++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~-----~~~~ 150 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-C-----EDNS 150 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-S-----CTTC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-C-----CCCC
Confidence 44577899999999999999999875 36999999999999999999999999888999999987631 1 1478
Q ss_pred eeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 196 YDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 196 fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
||+|++..... +...+++.+.++ |||||++++.+.....
T Consensus 151 fD~v~~~~~l~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~~~ 192 (297)
T 2o57_A 151 YDFIWSQDAFLHSPDKLKVFQECARV---LKPRGVMAITDPMKED 192 (297)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHH---EEEEEEEEEEEEEECT
T ss_pred EeEEEecchhhhcCCHHHHHHHHHHH---cCCCeEEEEEEeccCC
Confidence 99999876643 356678888888 9999999998775543
No 79
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.52 E-value=4.8e-14 Score=117.47 Aligned_cols=100 Identities=11% Similarity=0.151 Sum_probs=86.1
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...++.+ ++++++|+.+..+ .++||+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~-------~~~~D~ 135 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPS-------EPPFDG 135 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCC-------CSCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCc-------cCCcCE
Confidence 478999999999999999999876 6899999999999999999999988876 9999999976431 478999
Q ss_pred EEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 199 AFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 199 V~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|++... .+...+++.+.++ |+|||++++.
T Consensus 136 i~~~~~-~~~~~~l~~~~~~---L~~gG~l~~~ 164 (207)
T 1jsx_A 136 VISRAF-ASLNDMVSWCHHL---PGEQGRFYAL 164 (207)
T ss_dssp EECSCS-SSHHHHHHHHTTS---EEEEEEEEEE
T ss_pred EEEecc-CCHHHHHHHHHHh---cCCCcEEEEE
Confidence 997654 5566777877777 9999999986
No 80
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.52 E-value=3.8e-14 Score=124.17 Aligned_cols=104 Identities=21% Similarity=0.310 Sum_probs=86.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|..+..++.. +.+|+++|+++.+++.+++++...++..+++++++|+.+..+.. .++||+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~fD~ 139 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL-----ETPVDL 139 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC-----SSCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc-----CCCceE
Confidence 3569999999999999999986 47999999999999999999999888778999999997654222 589999
Q ss_pred EEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 199 AFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 199 V~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|++..... +...+++.+.++ |+|||++++...
T Consensus 140 v~~~~~l~~~~~~~~~l~~~~~~---LkpgG~l~~~~~ 174 (285)
T 4htf_A 140 ILFHAVLEWVADPRSVLQTLWSV---LRPGGVLSLMFY 174 (285)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHT---EEEEEEEEEEEE
T ss_pred EEECchhhcccCHHHHHHHHHHH---cCCCeEEEEEEe
Confidence 99987744 345677777777 999999998754
No 81
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.52 E-value=3.9e-13 Score=116.32 Aligned_cols=102 Identities=16% Similarity=0.248 Sum_probs=87.2
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++..+++. ++++++|..+.++ .++||
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~---g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~-------~~~fD 186 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL---GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP-------FGPFD 186 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG-------GCCEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHh---CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc-------CCCCC
Confidence 46789999999999999998874 249999999999999999999988876 8999999876422 47899
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
+|+++...+.....+..+.++ |+|||++++.++.
T Consensus 187 ~Vv~n~~~~~~~~~l~~~~~~---LkpgG~lils~~~ 220 (254)
T 2nxc_A 187 LLVANLYAELHAALAPRYREA---LVPGGRALLTGIL 220 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHH---EEEEEEEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHH---cCCCCEEEEEeec
Confidence 999987766677788888888 9999999997654
No 82
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.52 E-value=1.1e-13 Score=117.23 Aligned_cols=120 Identities=20% Similarity=0.257 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHH--hhcCCCEEEEEcccccHHHHHHHHHCC----CCCEEEEEecCccHHHHHHHHHHHhCC----CCcE
Q 023411 104 SPDQAQLLAMLV--QILGAQRCIEVGVYTGYSSLAIALVLP----ESGCLVACERDARSLEVAKKYYERAGV----SHKV 173 (282)
Q Consensus 104 ~~~~~~ll~~l~--~~~~~~~VLEIG~G~G~~t~~la~~~~----~~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~v 173 (282)
.+.....+...+ ...++.+|||||||+|+.+..+++... +.++|+++|+++++++.++++++..++ .+++
T Consensus 63 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 142 (227)
T 2pbf_A 63 APHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp CHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTE
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCE
Confidence 344443433333 356778999999999999999999874 467999999999999999999998874 3469
Q ss_pred EEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 174 KIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 174 ~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+++++|+.+..+.... ..++||+|+++...++. ++.+.++ |+|||++++.
T Consensus 143 ~~~~~d~~~~~~~~~~--~~~~fD~I~~~~~~~~~---~~~~~~~---LkpgG~lv~~ 192 (227)
T 2pbf_A 143 KIIHKNIYQVNEEEKK--ELGLFDAIHVGASASEL---PEILVDL---LAENGKLIIP 192 (227)
T ss_dssp EEEECCGGGCCHHHHH--HHCCEEEEEECSBBSSC---CHHHHHH---EEEEEEEEEE
T ss_pred EEEECChHhcccccCc--cCCCcCEEEECCchHHH---HHHHHHh---cCCCcEEEEE
Confidence 9999999774310000 03789999999876654 4677788 9999999885
No 83
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.52 E-value=2.4e-14 Score=125.73 Aligned_cols=108 Identities=19% Similarity=0.284 Sum_probs=89.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++.+|||||||+|.++..+++.+|.+++|+++|+++.+++.+++++...+. +++++++|+.+... .++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-------~~~ 89 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL-------NDK 89 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC-------SSC
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc-------CCC
Confidence 445788999999999999999999887568999999999999999999987654 69999999976421 468
Q ss_pred eeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 196 YDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 196 fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
||+|++..... +....++.+.++ |+|||++++.+..|
T Consensus 90 fD~v~~~~~l~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~ 129 (284)
T 3gu3_A 90 YDIAICHAFLLHMTTPETMLQKMIHS---VKKGGKIICFEPHW 129 (284)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHT---EEEEEEEEEEECCH
T ss_pred eeEEEECChhhcCCCHHHHHHHHHHH---cCCCCEEEEEecch
Confidence 99999987643 346677777777 99999999877664
No 84
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=5.3e-14 Score=118.02 Aligned_cols=115 Identities=20% Similarity=0.323 Sum_probs=92.8
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 023411 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (282)
Q Consensus 104 ~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (282)
.+.....+...+...++.+|||||||+|..+..+++..++.++|+++|+++++++.+++++...++.+ ++++++|..+.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~ 140 (215)
T 2yxe_A 62 AIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVGDGTLG 140 (215)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEESCGGGC
T ss_pred cHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEECCcccC
Confidence 44555555555666778899999999999999999987445899999999999999999999888765 99999998653
Q ss_pred HHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 184 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 184 l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+. .++||+|++....++.. +.+.++ |+|||.+++.
T Consensus 141 ~~~------~~~fD~v~~~~~~~~~~---~~~~~~---L~pgG~lv~~ 176 (215)
T 2yxe_A 141 YEP------LAPYDRIYTTAAGPKIP---EPLIRQ---LKDGGKLLMP 176 (215)
T ss_dssp CGG------GCCEEEEEESSBBSSCC---HHHHHT---EEEEEEEEEE
T ss_pred CCC------CCCeeEEEECCchHHHH---HHHHHH---cCCCcEEEEE
Confidence 321 36899999998766554 466777 9999999885
No 85
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.52 E-value=9.6e-14 Score=122.57 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=86.3
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh-CCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-GVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
.++.+|||||||+|..+..+++.+++..+|+++|+++.+++.++++++.. +...+++++++|+.+...........++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 36779999999999999999987744789999999999999999999886 55568999999997642110000002799
Q ss_pred eEEEEcCCcc--ccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 197 DFAFVDAEKR--MYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 197 DlV~id~~~~--~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|+|++....+ +...+++.+.++ |+|||++++
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~---LkpgG~l~i 147 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYAN---LRKDGTIAI 147 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHH---EEEEEEEEE
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHh---cCCCcEEEE
Confidence 9999876533 456678888888 999999988
No 86
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.52 E-value=7.3e-14 Score=125.59 Aligned_cols=121 Identities=16% Similarity=0.238 Sum_probs=92.8
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC----------CCC
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG----------VSH 171 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g----------~~~ 171 (282)
...+.....+...+...++.+|||+|||+|+.+..+++..++.++|+++|+++.+++.|++++...+ ...
T Consensus 88 ~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~ 167 (336)
T 2b25_A 88 ITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPD 167 (336)
T ss_dssp CCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCC
T ss_pred ccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCC
Confidence 4566656666666677888999999999999999999986546899999999999999999998643 235
Q ss_pred cEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 172 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 172 ~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+++++++|+.+....+. .++||+|+++..... ..++.+.++ |+|||.+++-
T Consensus 168 ~v~~~~~d~~~~~~~~~----~~~fD~V~~~~~~~~--~~l~~~~~~---LkpgG~lv~~ 218 (336)
T 2b25_A 168 NVDFIHKDISGATEDIK----SLTFDAVALDMLNPH--VTLPVFYPH---LKHGGVCAVY 218 (336)
T ss_dssp CEEEEESCTTCCC-----------EEEEEECSSSTT--TTHHHHGGG---EEEEEEEEEE
T ss_pred ceEEEECChHHcccccC----CCCeeEEEECCCCHH--HHHHHHHHh---cCCCcEEEEE
Confidence 79999999977532221 468999999865332 257778787 9999999874
No 87
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.52 E-value=2.6e-13 Score=111.44 Aligned_cols=157 Identities=11% Similarity=0.043 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHh-hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 023411 105 PDQAQLLAMLVQ-ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (282)
Q Consensus 105 ~~~~~ll~~l~~-~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (282)
|....+...... ..++.+|||+|||+|..++.++...| +.+|+++|+|+.+++.+++++..+|..+++++ +|..+.
T Consensus 34 p~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~ 110 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD 110 (200)
T ss_dssp GGHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH
T ss_pred HhHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc
Confidence 334444444333 25688999999999999999988766 67999999999999999999999999876777 555443
Q ss_pred HHHHHhCCCCCceeEEEEcCCccccHH---HHHHHHHhhcCCCCCcEEEEeCCC-CCCc-ccCCcCCChhhHHHHHHHHH
Q 023411 184 LKALILNGEASSYDFAFVDAEKRMYQE---YFELLLQLLLQIRVGGIIVIDNVL-WHGK-VADQMVNDAKTISIRNFNKN 258 (282)
Q Consensus 184 l~~l~~~~~~~~fDlV~id~~~~~~~~---~l~~~~~~~~~LkpgG~lv~dd~~-~~g~-~~~~~~~~~~~~~~~~~~~~ 258 (282)
.+ .++||+|+.....+...+ .+..+.+. |+|||++|--+.. ..|. ..- .... -..|.+.
T Consensus 111 ~~-------~~~~DvVLa~k~LHlL~~~~~al~~v~~~---L~pggvfISfptksl~Gr~~gm---~~~Y---~~~~~~~ 174 (200)
T 3fzg_A 111 VY-------KGTYDVVFLLKMLPVLKQQDVNILDFLQL---FHTQNFVISFPIKSLSGKEKGM---EENY---QLWFESF 174 (200)
T ss_dssp HT-------TSEEEEEEEETCHHHHHHTTCCHHHHHHT---CEEEEEEEEEECCCCC--CTTC---CCCH---HHHHHHH
T ss_pred CC-------CCCcChhhHhhHHHhhhhhHHHHHHHHHH---hCCCCEEEEeChHHhcCCCcch---hhhH---HHHHHHh
Confidence 22 689999998776444322 23355566 9999999887632 1121 111 1111 1233443
Q ss_pred hhhCCCeEEEEeecCCceEEEEE
Q 023411 259 LMEDERVSISMVPIGDGMTICQK 281 (282)
Q Consensus 259 ~~~~~~~~~~~lp~~~Gl~~~~k 281 (282)
+ ....+.+-.+-+++=+....+
T Consensus 175 ~-~~~~~~~~~~~~~nEl~y~~~ 196 (200)
T 3fzg_A 175 T-KGWIKILDSKVIGNELVYITS 196 (200)
T ss_dssp T-TTTSCEEEEEEETTEEEEEEC
T ss_pred c-cCcceeeeeeeeCceEEEEEe
Confidence 4 444555566667766665554
No 88
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=6.5e-14 Score=124.53 Aligned_cols=104 Identities=20% Similarity=0.188 Sum_probs=86.0
Q ss_pred CEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~ 200 (282)
.+|||||||+|..+.++++..+ +.++++||+++.+++.|++++.... ..+++++++|+.+.+.... .++||+||
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~----~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFT----PASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCC----TTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhcc----CCCCCEEE
Confidence 3999999999999999999876 6799999999999999999886432 4579999999988765431 47899999
Q ss_pred EcCCcc-----c--cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 201 VDAEKR-----M--YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 201 id~~~~-----~--~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+|.... + ...+++.+.++ |+|||++++...
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~---LkpgGvlv~~~~ 201 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRG---LAPGGLYVANCG 201 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHh---cCCCcEEEEEec
Confidence 986422 1 36789999999 999999998653
No 89
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.52 E-value=1.1e-13 Score=119.11 Aligned_cols=118 Identities=19% Similarity=0.221 Sum_probs=96.4
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh-CCCCcEEEEEcch
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-GVSHKVKIKHGLA 180 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g~~~~v~~~~gd~ 180 (282)
.+.+.....+...+...++.+|||+|||+|..+..+++.+.+.++|+++|+++++++.++++++.. | .++++++++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~ 157 (258)
T 2pwy_A 79 PTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKL 157 (258)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCG
T ss_pred cccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECch
Confidence 455555566666667778899999999999999999998654789999999999999999999988 7 45799999999
Q ss_pred hhH-HHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 181 ADS-LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 181 ~~~-l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+. ++ .++||+|+++.. .....++.+.++ |+|||.+++..
T Consensus 158 ~~~~~~-------~~~~D~v~~~~~--~~~~~l~~~~~~---L~~gG~l~~~~ 198 (258)
T 2pwy_A 158 EEAELE-------EAAYDGVALDLM--EPWKVLEKAALA---LKPDRFLVAYL 198 (258)
T ss_dssp GGCCCC-------TTCEEEEEEESS--CGGGGHHHHHHH---EEEEEEEEEEE
T ss_pred hhcCCC-------CCCcCEEEECCc--CHHHHHHHHHHh---CCCCCEEEEEe
Confidence 764 21 468999999754 333568888888 99999998854
No 90
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.52 E-value=9.5e-14 Score=121.40 Aligned_cols=119 Identities=21% Similarity=0.310 Sum_probs=99.0
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+.+.....+...+...++.+|||+|||+|..+..+++.+.+.++|+++|+++++++.++++++..++.++++++++|+.
T Consensus 95 ~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 174 (277)
T 1o54_A 95 IVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS 174 (277)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGG
T ss_pred ccCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 45566666666777777889999999999999999999865578999999999999999999999888678999999997
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+.++ .++||+|+++.. ....+++.+.++ |+|||.+++..
T Consensus 175 ~~~~-------~~~~D~V~~~~~--~~~~~l~~~~~~---L~pgG~l~~~~ 213 (277)
T 1o54_A 175 EGFD-------EKDVDALFLDVP--DPWNYIDKCWEA---LKGGGRFATVC 213 (277)
T ss_dssp GCCS-------CCSEEEEEECCS--CGGGTHHHHHHH---EEEEEEEEEEE
T ss_pred Hccc-------CCccCEEEECCc--CHHHHHHHHHHH---cCCCCEEEEEe
Confidence 6521 468999999764 233568888888 99999999864
No 91
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.51 E-value=2.1e-14 Score=126.03 Aligned_cols=105 Identities=17% Similarity=0.119 Sum_probs=90.0
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|.+++.+++..+ .+|+++|+++.+++.|+++++.+++.++++++++|+.+... .++||
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-------~~~fD 194 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------ENIAD 194 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------CSCEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-------cCCcc
Confidence 3578999999999999999999754 28999999999999999999999998889999999987543 47899
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
+|+++.+.. ...+++.+.++ |+|||++++.....
T Consensus 195 ~Vi~~~p~~-~~~~l~~~~~~---LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 195 RILMGYVVR-THEFIPKALSI---AKDGAIIHYHNTVP 228 (278)
T ss_dssp EEEECCCSS-GGGGHHHHHHH---EEEEEEEEEEEEEE
T ss_pred EEEECCchh-HHHHHHHHHHH---CCCCeEEEEEEeec
Confidence 999987743 35678888888 99999999976643
No 92
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.51 E-value=3.3e-13 Score=122.93 Aligned_cols=150 Identities=17% Similarity=0.243 Sum_probs=99.9
Q ss_pred cCCCEEEEEccc------ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH--HHHHh
Q 023411 118 LGAQRCIEVGVY------TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KALIL 189 (282)
Q Consensus 118 ~~~~~VLEIG~G------~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~l~~ 189 (282)
.++.+||||||| +|..++.+++...++++|+++|+++.+. . ...+++++++|+.+.. ..+..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~-~~~rI~fv~GDa~dlpf~~~l~~ 284 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------V-DELRIRTIQGDQNDAEFLDRIAR 284 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------G-CBTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------h-cCCCcEEEEecccccchhhhhhc
Confidence 367899999999 7777777776542378999999999972 1 2357999999997632 11111
Q ss_pred CCCCCceeEEEEcCCc--cccHHHHHHHHHhhcCCCCCcEEEEeCCC---C---CCcccCCcCCChhhHHHHHHHHHhhh
Q 023411 190 NGEASSYDFAFVDAEK--RMYQEYFELLLQLLLQIRVGGIIVIDNVL---W---HGKVADQMVNDAKTISIRNFNKNLME 261 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~--~~~~~~l~~~~~~~~~LkpgG~lv~dd~~---~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 261 (282)
. .++||+||++... .+....++.+.++ |||||++++.|+. | .|...+......-...++++.+.+..
T Consensus 285 ~--d~sFDlVisdgsH~~~d~~~aL~el~rv---LKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~ 359 (419)
T 3sso_A 285 R--YGPFDIVIDDGSHINAHVRTSFAALFPH---VRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQH 359 (419)
T ss_dssp H--HCCEEEEEECSCCCHHHHHHHHHHHGGG---EEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTG
T ss_pred c--cCCccEEEECCcccchhHHHHHHHHHHh---cCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcc
Confidence 0 3789999998763 2344566666666 9999999999997 2 33221111112223456666666532
Q ss_pred C---------CCe---EEEEeecCCceEEEEEC
Q 023411 262 D---------ERV---SISMVPIGDGMTICQKR 282 (282)
Q Consensus 262 ~---------~~~---~~~~lp~~~Gl~~~~k~ 282 (282)
. |.+ .+.-+.+-+++.+..|+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 360 QELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp GGSCCCTTCCCCHHHHHEEEEEEETTEEEEEES
T ss_pred cccCCCcCCCCCccccceeEEEecCcEEEEEec
Confidence 1 222 25678899999998884
No 93
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.51 E-value=5.4e-14 Score=117.56 Aligned_cols=116 Identities=13% Similarity=-0.004 Sum_probs=83.2
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC-----------CCC
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG-----------VSH 171 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-----------~~~ 171 (282)
+++...+++..+ ...++.+|||+|||+|..+.++++. +.+|+|+|+|+.+++.|+++..... ...
T Consensus 7 ~~~~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 82 (203)
T 1pjz_A 7 VNKDLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP 82 (203)
T ss_dssp STHHHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS
T ss_pred CCHHHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCC
Confidence 344444444332 2346789999999999999999986 4699999999999999998754210 124
Q ss_pred cEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCcc-----ccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 172 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-----MYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 172 ~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~-----~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+++++++|+.+..... .++||+|++..... ....+++.+.++ |||||.+++
T Consensus 83 ~v~~~~~d~~~l~~~~-----~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~---LkpgG~~~l 138 (203)
T 1pjz_A 83 GIEIWCGDFFALTARD-----IGHCAAFYDRAAMIALPADMRERYVQHLEAL---MPQACSGLL 138 (203)
T ss_dssp SSEEEEECCSSSTHHH-----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHH---SCSEEEEEE
T ss_pred ccEEEECccccCCccc-----CCCEEEEEECcchhhCCHHHHHHHHHHHHHH---cCCCcEEEE
Confidence 6999999997753321 16899999765432 234467788888 999998433
No 94
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=2.8e-14 Score=121.81 Aligned_cols=106 Identities=18% Similarity=0.186 Sum_probs=81.3
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|+++.+..+ .+++++++|+.+..+.+ .+++||
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~----~~~~fD 130 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL----PDGHFD 130 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS----CTTCEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhccc----CCCceE
Confidence 356799999999999999997643 2489999999999999999887665 46999999997653222 157999
Q ss_pred EEEEcCCc-----cc---cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 198 FAFVDAEK-----RM---YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 198 lV~id~~~-----~~---~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
+|++|... .+ ...+++.+.++ |||||++++-+..
T Consensus 131 ~V~~d~~~~~~~~~~~~~~~~~l~~~~r~---LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRL---LKPGGVLTYCNLT 172 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHH---EEEEEEEEECCHH
T ss_pred EEEECCcccchhhhhhhhHHHHHHHHHHh---cCCCeEEEEEecC
Confidence 99994221 11 22457778888 9999999986654
No 95
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.51 E-value=5e-14 Score=119.54 Aligned_cols=112 Identities=12% Similarity=0.122 Sum_probs=89.7
Q ss_pred HHHHhh-cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC
Q 023411 112 AMLVQI-LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 190 (282)
Q Consensus 112 ~~l~~~-~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~ 190 (282)
..+... .++.+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+|+.++++++++|..+.++.
T Consensus 7 ~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~---- 81 (225)
T 3kr9_A 7 ELVASFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE---- 81 (225)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG----
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc----
Confidence 344443 3556999999999999999998754 5789999999999999999999999999999999999765431
Q ss_pred CCCCceeEEEEcCC-ccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 191 GEASSYDFAFVDAE-KRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 191 ~~~~~fDlV~id~~-~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.++||+|++.+. ..-....++..... |+++|.+|+...
T Consensus 82 --~~~~D~IviaG~Gg~~i~~Il~~~~~~---L~~~~~lVlq~~ 120 (225)
T 3kr9_A 82 --TDQVSVITIAGMGGRLIARILEEGLGK---LANVERLILQPN 120 (225)
T ss_dssp --GGCCCEEEEEEECHHHHHHHHHHTGGG---CTTCCEEEEEES
T ss_pred --CcCCCEEEEcCCChHHHHHHHHHHHHH---hCCCCEEEEECC
Confidence 136999887543 33356677777777 999999999755
No 96
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.51 E-value=1.4e-14 Score=128.38 Aligned_cols=110 Identities=15% Similarity=0.085 Sum_probs=90.2
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..++....++++|+++|+++.+++.+++++...++.++++++++|+.+... .++|
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~f 188 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT-------REGY 188 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC-------CSCE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc-------cCCe
Confidence 467889999999999999998633334789999999999999999999999988889999999976421 4799
Q ss_pred eEEEEcCCccc------cHHHHHHHHHhhcCCCCCcEEEEeCCCCC
Q 023411 197 DFAFVDAEKRM------YQEYFELLLQLLLQIRVGGIIVIDNVLWH 236 (282)
Q Consensus 197 DlV~id~~~~~------~~~~l~~~~~~~~~LkpgG~lv~dd~~~~ 236 (282)
|+|++.....+ ...+++.+.++ |+|||++++.+...+
T Consensus 189 D~v~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDARVTELYRRFWQA---LKPGGALVTSFLTPP 231 (305)
T ss_dssp EEEECCSSGGGCCCHHHHHHHHHHHHHH---EEEEEEEEEECCCCC
T ss_pred EEEEECChhhhcCCHHHHHHHHHHHHHh---cCCCeEEEEEecCCC
Confidence 99999765332 22367888888 999999999886543
No 97
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.50 E-value=6.6e-14 Score=120.91 Aligned_cols=112 Identities=16% Similarity=0.236 Sum_probs=89.3
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC
Q 023411 111 LAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 190 (282)
Q Consensus 111 l~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~ 190 (282)
+...+...++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++...++. +++++++|+.+. + +
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l-~-~--- 99 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQM-P-F--- 99 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CC-C-S---
T ss_pred HHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhC-C-C---
Confidence 3334455678899999999999999999874 49999999999999999999988876 599999998653 2 1
Q ss_pred CCCCceeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 191 GEASSYDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
.+++||+|++....+ +....+..+.++ |+|||.+++.+...
T Consensus 100 -~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~---LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 100 -TDERFHIVTCRIAAHHFPNPASFVSEAYRV---LKKGGQLLLVDNSA 143 (260)
T ss_dssp -CTTCEEEEEEESCGGGCSCHHHHHHHHHHH---EEEEEEEEEEEEEB
T ss_pred -CCCCEEEEEEhhhhHhcCCHHHHHHHHHHH---cCCCCEEEEEEcCC
Confidence 147999999986643 456678888888 99999999965543
No 98
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.50 E-value=9.9e-14 Score=118.77 Aligned_cols=105 Identities=11% Similarity=0.159 Sum_probs=83.2
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHH------hCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER------AGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~------~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
+..+|||||||+|.++..+++..| +..|+|||+++.+++.|+++++. .+.. +++++++|+.+.++....
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~-nv~~~~~d~~~~l~~~~~--- 120 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQ-NIACLRSNAMKHLPNFFY--- 120 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCT-TEEEEECCTTTCHHHHCC---
T ss_pred CCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCC-eEEEEECcHHHhhhhhCC---
Confidence 556899999999999999999876 68999999999999999988764 3443 599999999875543221
Q ss_pred CCceeEEEEcCCccc-----------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 193 ASSYDFAFVDAEKRM-----------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 193 ~~~fDlV~id~~~~~-----------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.++||.|++...... ...+++.+.++ |+|||.|++.
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~---LkpGG~l~~~ 167 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYV---LRVGGLVYTI 167 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHH---EEEEEEEEEE
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHH---CCCCCEEEEE
Confidence 578999988643111 24688889898 9999999874
No 99
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.50 E-value=1.2e-13 Score=118.00 Aligned_cols=118 Identities=14% Similarity=0.236 Sum_probs=94.4
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHH
Q 023411 106 DQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 185 (282)
Q Consensus 106 ~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~ 185 (282)
.....+.......++.+|||||||+|..+..++... .+|+++|+++.+++.+++++...++. +++++++|+.+. +
T Consensus 8 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~ 82 (239)
T 1xxl_A 8 HSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESL-P 82 (239)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBC-C
T ss_pred CCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccC-C
Confidence 334445566667788999999999999999999864 59999999999999999999988876 599999998653 2
Q ss_pred HHHhCCCCCceeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCCC
Q 023411 186 ALILNGEASSYDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLWH 236 (282)
Q Consensus 186 ~l~~~~~~~~fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~ 236 (282)
. .+++||+|++..... +....+..+.++ |+|||.+++.+...+
T Consensus 83 ~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 83 F-----PDDSFDIITCRYAAHHFSDVRKAVREVARV---LKQDGRFLLVDHYAP 128 (239)
T ss_dssp S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHH---EEEEEEEEEEEECBC
T ss_pred C-----CCCcEEEEEECCchhhccCHHHHHHHHHHH---cCCCcEEEEEEcCCC
Confidence 1 147899999986643 456677888888 999999999765543
No 100
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.50 E-value=3e-14 Score=121.00 Aligned_cols=107 Identities=16% Similarity=0.202 Sum_probs=87.2
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++..+ +.+++++|+++.+++.+++++...+ +++++++|+.+... .++|
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~-------~~~f 110 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF-------EEKY 110 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC-------CSCE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC-------CCCc
Confidence 34678999999999999999999886 7899999999999999999876544 69999999976421 3799
Q ss_pred eEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|+|++....++. ...++.+.++ |+|||.+++.+...+.
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSI---LKESGIFINADLVHGE 153 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEECBCS
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHh---cCCCcEEEEEEecCCC
Confidence 999998774443 2367788888 9999999997765443
No 101
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.50 E-value=1.1e-13 Score=120.93 Aligned_cols=122 Identities=21% Similarity=0.272 Sum_probs=98.1
Q ss_pred CCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh-C-CCCcEEEEE
Q 023411 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-G-VSHKVKIKH 177 (282)
Q Consensus 100 ~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g-~~~~v~~~~ 177 (282)
...+.+.....+...+...++.+|||+|||+|..+..+++.+.+.++|+++|+++++++.++++++.. | +.+++++++
T Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~ 159 (280)
T 1i9g_A 80 PQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV 159 (280)
T ss_dssp SCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC
T ss_pred ceeecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 33456666666666677778889999999999999999997654689999999999999999999887 5 455799999
Q ss_pred cchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 178 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 178 gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+|+.+.. + ..++||+|+++.. +....++.+.++ |+|||.+++..
T Consensus 160 ~d~~~~~--~----~~~~~D~v~~~~~--~~~~~l~~~~~~---L~pgG~l~~~~ 203 (280)
T 1i9g_A 160 SDLADSE--L----PDGSVDRAVLDML--APWEVLDAVSRL---LVAGGVLMVYV 203 (280)
T ss_dssp SCGGGCC--C----CTTCEEEEEEESS--CGGGGHHHHHHH---EEEEEEEEEEE
T ss_pred CchHhcC--C----CCCceeEEEECCc--CHHHHHHHHHHh---CCCCCEEEEEe
Confidence 9997641 1 1468999999765 333568888888 99999999854
No 102
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.50 E-value=3.5e-13 Score=124.76 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHH-------HHHHHHhCCC-CcEEEE
Q 023411 105 PDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVA-------KKYYERAGVS-HKVKIK 176 (282)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a-------~~~~~~~g~~-~~v~~~ 176 (282)
+.....+...+...++.+|||||||+|..++.++...+ ..+|+|||+++.+++.| ++++...|+. .+++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 44444444555667888999999999999999998765 46899999999999988 8888888854 579999
Q ss_pred EcchhhH---HHHHHhCCCCCceeEEEEcCCc--cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 177 HGLAADS---LKALILNGEASSYDFAFVDAEK--RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 177 ~gd~~~~---l~~l~~~~~~~~fDlV~id~~~--~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
++|.... ++.. .++||+|++.... .+....+..+.+. |+|||.|++.+.+.+..
T Consensus 307 ~gD~~~~~~~~~~~-----~~~FDvIvvn~~l~~~d~~~~L~el~r~---LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 307 LKKSFVDNNRVAEL-----IPQCDVILVNNFLFDEDLNKKVEKILQT---AKVGCKIISLKSLRSLT 365 (433)
T ss_dssp ESSCSTTCHHHHHH-----GGGCSEEEECCTTCCHHHHHHHHHHHTT---CCTTCEEEESSCSSCTT
T ss_pred EcCccccccccccc-----cCCCCEEEEeCccccccHHHHHHHHHHh---CCCCeEEEEeeccCCcc
Confidence 9865421 2222 3689999986442 3344455666665 99999999988765554
No 103
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.50 E-value=3.9e-13 Score=118.21 Aligned_cols=106 Identities=20% Similarity=0.298 Sum_probs=86.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC--C-CCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--V-SHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~-~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
.++++|||||||+|..+..+++..+ ..+++++|+++.+++.+++++...+ + ..+++++++|+.+.++.. .+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-----~~ 150 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-----TN 150 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-----CS
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-----CC
Confidence 4678999999999999999997644 6799999999999999999886532 2 357999999998876543 57
Q ss_pred ceeEEEEcCCcc-----c--cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 195 SYDFAFVDAEKR-----M--YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 195 ~fDlV~id~~~~-----~--~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+||+|++|.... . ...+++.+.++ |+|||++++..
T Consensus 151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~---L~pgG~lv~~~ 192 (283)
T 2i7c_A 151 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNA---LKPNGYCVAQC 192 (283)
T ss_dssp CEEEEEEECCCTTTGGGGGSSHHHHHHHHHH---EEEEEEEEEEC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHHh---cCCCcEEEEEC
Confidence 899999986421 1 16789999998 99999999974
No 104
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.50 E-value=6.2e-14 Score=122.06 Aligned_cols=108 Identities=22% Similarity=0.244 Sum_probs=90.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++..| +.+|+++|+++.+++.+++++...++. +++++.+|+.+... ..++|
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~------~~~~f 106 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPF------EDSSF 106 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCS------CTTCE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCC------CCCCe
Confidence 35778999999999999999999875 689999999999999999999998876 59999999976421 15799
Q ss_pred eEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 197 DFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 197 DlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
|+|++..... +...+++.+.++ |+|||++++.+..+
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLKKV---LKPGGTITVIEGDH 145 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHH---EEEEEEEEEEEECG
T ss_pred eEEEEechhhhcCCHHHHHHHHHHH---cCCCcEEEEEEcCC
Confidence 9999987633 345678888888 99999999976554
No 105
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.49 E-value=4.1e-13 Score=126.26 Aligned_cols=127 Identities=20% Similarity=0.243 Sum_probs=101.2
Q ss_pred CCccCHHHHHHHHHHHhhc--CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEE
Q 023411 100 QMQVSPDQAQLLAMLVQIL--GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH 177 (282)
Q Consensus 100 ~~~~~~~~~~ll~~l~~~~--~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~ 177 (282)
...+......++..++... ++.+|||+|||+|..|..+++.++..++|+++|+++.+++.++++++..|+.+ +++++
T Consensus 96 ~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~n-v~~~~ 174 (479)
T 2frx_A 96 LFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISN-VALTH 174 (479)
T ss_dssp SEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCS-EEEEC
T ss_pred EEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEe
Confidence 3445556666666677666 88999999999999999999998756899999999999999999999999874 99999
Q ss_pred cchhhHHHHHHhCCCCCceeEEEEcCCccc-------------------------cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 178 GLAADSLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 178 gd~~~~l~~l~~~~~~~~fDlV~id~~~~~-------------------------~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+|+.+..... .++||.|++|++... ....++.+.++ |||||+||+..
T Consensus 175 ~D~~~~~~~~-----~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~---LkpGG~LvysT 246 (479)
T 2frx_A 175 FDGRVFGAAV-----PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHA---LRPGGTLVYST 246 (479)
T ss_dssp CCSTTHHHHS-----TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHH---EEEEEEEEEEE
T ss_pred CCHHHhhhhc-----cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHh---cCCCCEEEEec
Confidence 9997754323 478999999865210 12456667777 99999999976
Q ss_pred CCC
Q 023411 233 VLW 235 (282)
Q Consensus 233 ~~~ 235 (282)
.-+
T Consensus 247 cs~ 249 (479)
T 2frx_A 247 CTL 249 (479)
T ss_dssp SCC
T ss_pred ccC
Confidence 643
No 106
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.49 E-value=6.2e-14 Score=124.66 Aligned_cols=110 Identities=11% Similarity=0.139 Sum_probs=91.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++.. +++|+++|+++++++.|+++++..++.++++++++|+.+.. . ..++|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~----~~~~f 186 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP--F----DKGAV 186 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C----CTTCE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC--C----CCCCE
Confidence 4567899999999999999999875 47999999999999999999999999888999999997532 1 14799
Q ss_pred eEEEEcCCcc--ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKR--MYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~--~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|+|++....+ ....+++.+.++ |||||.+++.+.....
T Consensus 187 D~V~~~~~l~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 187 TASWNNESTMYVDLHDLFSEHSRF---LKVGGRYVTITGCWNP 226 (312)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHH---EEEEEEEEEEEEEECT
T ss_pred eEEEECCchhhCCHHHHHHHHHHH---cCCCcEEEEEEccccc
Confidence 9999876533 356778888888 9999999987655444
No 107
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.49 E-value=6.1e-14 Score=119.60 Aligned_cols=106 Identities=13% Similarity=0.115 Sum_probs=84.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
+.++.+|||+|||+|+.+..+++.++++|+|+++|+++++++.++++.+.. .++..+.+|..+... .. ...+++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~-~~--~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEK-YR--HLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGG-GT--TTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccc-cc--cccceE
Confidence 568899999999999999999999877899999999999999998876643 358999988865311 10 115789
Q ss_pred eEEEEcCCcc-ccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 197 DFAFVDAEKR-MYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 197 DlV~id~~~~-~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|+||+|.... +....+..+.+. |||||.+++.
T Consensus 149 DvVf~d~~~~~~~~~~l~~~~r~---LKpGG~lvI~ 181 (233)
T 4df3_A 149 DGLYADVAQPEQAAIVVRNARFF---LRDGGYMLMA 181 (233)
T ss_dssp EEEEECCCCTTHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred EEEEEeccCChhHHHHHHHHHHh---ccCCCEEEEE
Confidence 9999987644 344577888888 9999999884
No 108
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.48 E-value=6e-14 Score=120.99 Aligned_cols=107 Identities=8% Similarity=0.125 Sum_probs=85.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++.. +.+|+++|+++.+++.++++.... .+++++++|+.+. +. ..++|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~~-----~~~~f 121 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK-EF-----PENNF 121 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC-CC-----CTTCE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC-CC-----CCCcE
Confidence 4567899999999999999999876 479999999999999999877543 5799999999764 11 15799
Q ss_pred eEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|+|++....++ ...+++.+.++ |+|||.+++.+...+.
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~---L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKW---LKPTGTLLITDYCATE 164 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEEEESC
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHH---cCCCCEEEEEEeccCC
Confidence 99999877544 34566777777 9999999998765443
No 109
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.48 E-value=9.2e-14 Score=126.92 Aligned_cols=105 Identities=10% Similarity=0.104 Sum_probs=86.4
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC--cEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH--KVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~--~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++.+|||+|||+|.+++.+++..| +.+|+++|+++.+++.+++++..+++.+ +++++.+|..+.++ .
T Consensus 219 ~~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~-------~ 290 (375)
T 4dcm_A 219 PENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE-------P 290 (375)
T ss_dssp CCSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC-------T
T ss_pred cccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC-------C
Confidence 334558999999999999999999876 6899999999999999999999998764 58889999976322 4
Q ss_pred CceeEEEEcCCccc--------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 194 SSYDFAFVDAEKRM--------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 194 ~~fDlV~id~~~~~--------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
++||+|+++.+.+. ...+++.+.++ |+|||++++-
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~---LkpgG~l~iv 333 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC---LKINGELYIV 333 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHh---CCCCcEEEEE
Confidence 79999999876321 23567888888 9999999883
No 110
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.48 E-value=2.1e-13 Score=118.00 Aligned_cols=119 Identities=13% Similarity=0.006 Sum_probs=87.2
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHH----------hC---
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER----------AG--- 168 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~----------~g--- 168 (282)
...+....++..+....++.+|||+|||+|..+.+|++. +.+|+|||+|+.+++.|++.... .+
T Consensus 51 ~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~ 127 (252)
T 2gb4_A 51 QGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKV 127 (252)
T ss_dssp TCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEE
T ss_pred CCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccc
Confidence 455555555555444457789999999999999999985 46999999999999999775531 00
Q ss_pred ---CCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCC-----ccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 169 ---VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 169 ---~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~-----~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
...+++++++|+.+..... .++||+|+.... ......+++.+.++ |||||++++-
T Consensus 128 ~~~~~~~i~~~~~D~~~l~~~~-----~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~---LkpGG~l~l~ 190 (252)
T 2gb4_A 128 FKSSSGSISLYCCSIFDLPRAN-----IGKFDRIWDRGALVAINPGDHDRYADIILSL---LRKEFQYLVA 190 (252)
T ss_dssp EEETTSSEEEEESCTTTGGGGC-----CCCEEEEEESSSTTTSCGGGHHHHHHHHHHT---EEEEEEEEEE
T ss_pred cccCCCceEEEECccccCCccc-----CCCEEEEEEhhhhhhCCHHHHHHHHHHHHHH---cCCCeEEEEE
Confidence 1246999999998753210 279999997543 22345678888888 9999998643
No 111
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.48 E-value=2.8e-13 Score=115.58 Aligned_cols=106 Identities=12% Similarity=0.065 Sum_probs=79.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++...+..+.. .++.++++|+...... .. ..++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~--~~-~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSY--KS-VVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGT--TT-TCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhh--hc-cccce
Confidence 457789999999999999999998776899999999999876554444332 3599999998653110 00 04689
Q ss_pred eEEEEcCCccccHHHH-HHHHHhhcCCCCCcEEEEe
Q 023411 197 DFAFVDAEKRMYQEYF-ELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 197 DlV~id~~~~~~~~~l-~~~~~~~~~LkpgG~lv~d 231 (282)
|+||+|.........+ ..+.++ |||||.+++.
T Consensus 148 D~I~~d~a~~~~~~il~~~~~~~---LkpGG~lvis 180 (232)
T 3id6_C 148 DVLYVDIAQPDQTDIAIYNAKFF---LKVNGDMLLV 180 (232)
T ss_dssp EEEEECCCCTTHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred EEEEecCCChhHHHHHHHHHHHh---CCCCeEEEEE
Confidence 9999998765554444 445557 9999999985
No 112
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.48 E-value=9e-13 Score=128.81 Aligned_cols=157 Identities=10% Similarity=0.095 Sum_probs=113.0
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh------CCCCcEEEEEcchh
Q 023411 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA------GVSHKVKIKHGLAA 181 (282)
Q Consensus 108 ~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~------g~~~~v~~~~gd~~ 181 (282)
...+...+...++.+|||||||+|..+..+++..++..+|+|+|+++.+++.|++++... ++. +++++++|+.
T Consensus 710 le~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqGDa~ 788 (950)
T 3htx_A 710 VEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDGSIL 788 (950)
T ss_dssp HHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEESCTT
T ss_pred HHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEECchH
Confidence 333444555568899999999999999999987644579999999999999999977643 333 6999999997
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccccH-----HHHHHHHHhhcCCCCCcEEEEeCCC------CCCc------------
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRMYQ-----EYFELLLQLLLQIRVGGIIVIDNVL------WHGK------------ 238 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~~~-----~~l~~~~~~~~~LkpgG~lv~dd~~------~~g~------------ 238 (282)
+.... .++||+|++....++.. .+++.+.++ |||| .+++...- +.+.
T Consensus 789 dLp~~------d~sFDlVV~~eVLeHL~dp~l~~~L~eI~Rv---LKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~ 858 (950)
T 3htx_A 789 EFDSR------LHDVDIGTCLEVIEHMEEDQACEFGEKVLSL---FHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEP 858 (950)
T ss_dssp SCCTT------SCSCCEEEEESCGGGSCHHHHHHHHHHHHHT---TCCS-EEEEEECBGGGHHHHTCC------------
T ss_pred hCCcc------cCCeeEEEEeCchhhCChHHHHHHHHHHHHH---cCCC-EEEEEecCchhhhhhhhccccccccccccc
Confidence 64221 58999999987765533 356666777 9999 66665432 2211
Q ss_pred ----ccCCcC-CChhhHHHHHHHHHhhhCCCeEEEEeecCCc
Q 023411 239 ----VADQMV-NDAKTISIRNFNKNLMEDERVSISMVPIGDG 275 (282)
Q Consensus 239 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~G 275 (282)
...++. ..-....++.|.+.+.+..++.+...++|+|
T Consensus 859 ~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 859 QLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred ccccccccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 000100 0112346778888888888999999999998
No 113
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.48 E-value=1.6e-13 Score=115.98 Aligned_cols=104 Identities=14% Similarity=0.238 Sum_probs=84.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCC----CCcEEEEEcchhhHHHHHHhCCC
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV----SHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
..++.+|||||||+|..+..+++..++.++|+++|+++.+++.+++++...+. .++++++++|+.+....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE------ 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc------
Confidence 45678999999999999999998865457999999999999999999988765 45699999998653221
Q ss_pred CCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 193 ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 193 ~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.++||+|+++....+. ++.+.++ |+|||++++.-
T Consensus 149 ~~~fD~i~~~~~~~~~---~~~~~~~---LkpgG~lv~~~ 182 (226)
T 1i1n_A 149 EAPYDAIHVGAAAPVV---PQALIDQ---LKPGGRLILPV 182 (226)
T ss_dssp GCCEEEEEECSBBSSC---CHHHHHT---EEEEEEEEEEE
T ss_pred CCCcCEEEECCchHHH---HHHHHHh---cCCCcEEEEEE
Confidence 4689999999876554 3567777 99999999853
No 114
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.48 E-value=2.2e-13 Score=121.03 Aligned_cols=106 Identities=12% Similarity=0.187 Sum_probs=84.2
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHH---hCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER---AGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~---~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++.. .....+++++.+|+.+.+.... .+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~----~~ 168 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTP----DN 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSC----TT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhcc----CC
Confidence 4678999999999999999998643 57999999999999999998743 2234579999999987654211 47
Q ss_pred ceeEEEEcCCccc-------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 195 SYDFAFVDAEKRM-------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 195 ~fDlV~id~~~~~-------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+||+|++|..... ...+++.+.++ |+|||++++.
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~---LkpgG~lv~~ 209 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRI---LKPDGICCNQ 209 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHH---EEEEEEEEEE
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHh---cCCCcEEEEe
Confidence 8999999875322 15788888888 9999999986
No 115
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.48 E-value=3.8e-13 Score=123.26 Aligned_cols=109 Identities=16% Similarity=0.163 Sum_probs=87.7
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC-cEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
.++++|||+|||+|.+++.++... ..+|+++|+++.+++.|+++++.+++.+ +++++++|+.+.++..... ..+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~--~~~f 286 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH--HLTY 286 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT--TCCE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh--CCCc
Confidence 567899999999999999999842 2589999999999999999999999875 7999999999877655332 3589
Q ss_pred eEEEEcCCcc-----c-------cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 197 DFAFVDAEKR-----M-------YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 197 DlV~id~~~~-----~-------~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|+|++|++.- . +..++..+.++ |+|||++++...
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~---L~pgG~l~~~~~ 332 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEI---LSENGLIIASTN 332 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHT---EEEEEEEEEEEC
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHh---cCCCcEEEEEeC
Confidence 9999987641 1 22344555566 999999998754
No 116
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.48 E-value=2.6e-13 Score=111.88 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=85.7
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
..+...++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...++.+ ++++++|+.+...
T Consensus 26 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~------- 94 (199)
T 2xvm_A 26 EAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDN-LHTRVVDLNNLTF------- 94 (199)
T ss_dssp HHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECCGGGCCC-------
T ss_pred HHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCC-cEEEEcchhhCCC-------
Confidence 3344557789999999999999999986 4799999999999999999999888754 9999999876321
Q ss_pred CCceeEEEEcCCcc-----ccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 193 ASSYDFAFVDAEKR-----MYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 193 ~~~fDlV~id~~~~-----~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.++||+|++..... ....+++.+.++ |+|||.+++-+
T Consensus 95 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~---L~~gG~l~~~~ 136 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLEAKTIPGLIANMQRC---TKPGGYNLIVA 136 (199)
T ss_dssp CCCEEEEEEESCGGGSCGGGHHHHHHHHHHT---EEEEEEEEEEE
T ss_pred CCCceEEEEcchhhhCCHHHHHHHHHHHHHh---cCCCeEEEEEE
Confidence 47899999886633 455677777777 99999976643
No 117
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.48 E-value=4e-13 Score=123.52 Aligned_cols=111 Identities=19% Similarity=0.272 Sum_probs=91.8
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCC-CCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV-SHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
...++++|||+|||+|.+++.++... ..+|+++|+++.+++.|+++++.+++ .++++++++|+.+.++.+... ..
T Consensus 217 ~~~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~--~~ 292 (396)
T 3c0k_A 217 RYVENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR--GE 292 (396)
T ss_dssp HHCTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHT--TC
T ss_pred HhhCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhc--CC
Confidence 33678899999999999999999852 36999999999999999999999998 657999999998877655322 36
Q ss_pred ceeEEEEcCCc------------cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 195 SYDFAFVDAEK------------RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 195 ~fDlV~id~~~------------~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+||+|++|.+. ..+..++..+.++ |+|||++++...
T Consensus 293 ~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~ 340 (396)
T 3c0k_A 293 KFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQL---LNEGGILLTFSC 340 (396)
T ss_dssp CEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHT---EEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHh---cCCCcEEEEEeC
Confidence 89999999764 4456667777777 999999998654
No 118
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.48 E-value=2.7e-13 Score=115.96 Aligned_cols=117 Identities=18% Similarity=0.187 Sum_probs=96.4
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+.+.....+...+...++.+|||+|||+|..+..+++. ..+|+++|+++++++.++++....++.++++++.+|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 150 (248)
T 2yvl_A 74 IIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFK 150 (248)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTT
T ss_pred cccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChh
Confidence 345666667777777778899999999999999999987 47999999999999999999999888778999999987
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+... ..++||+||++.. +....++.+.++ |+|||.+++..
T Consensus 151 ~~~~------~~~~~D~v~~~~~--~~~~~l~~~~~~---L~~gG~l~~~~ 190 (248)
T 2yvl_A 151 DAEV------PEGIFHAAFVDVR--EPWHYLEKVHKS---LMEGAPVGFLL 190 (248)
T ss_dssp TSCC------CTTCBSEEEECSS--CGGGGHHHHHHH---BCTTCEEEEEE
T ss_pred hccc------CCCcccEEEECCc--CHHHHHHHHHHH---cCCCCEEEEEe
Confidence 6420 0468999999755 334567888888 99999998854
No 119
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.48 E-value=1.7e-13 Score=115.28 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=78.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++..+ +++|+|+|+|+.+++.+.+..+.. +++.++++|+.+..... .. .++||
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~--~~-~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYS--GI-VEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTT--TT-CCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhc--cc-cccee
Confidence 4567999999999999999999887 789999999999887666655542 35899999886531100 00 37899
Q ss_pred EEEEcCCccccH-HHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKRMYQ-EYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~~~~-~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|+++...+... .+++.+.++ |||||.+++.
T Consensus 129 ~V~~~~~~~~~~~~~l~~~~r~---LkpgG~l~i~ 160 (210)
T 1nt2_A 129 LIYQDIAQKNQIEILKANAEFF---LKEKGEVVIM 160 (210)
T ss_dssp EEEECCCSTTHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred EEEEeccChhHHHHHHHHHHHH---hCCCCEEEEE
Confidence 999986544322 347788888 9999999986
No 120
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.48 E-value=5e-14 Score=120.02 Aligned_cols=107 Identities=10% Similarity=0.139 Sum_probs=84.0
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHh
Q 023411 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (282)
Q Consensus 110 ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~ 189 (282)
++..+....++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++.. +++++++|+.+..+
T Consensus 33 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~---- 100 (250)
T 2p7i_A 33 MVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQL---- 100 (250)
T ss_dssp HHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCC----
T ss_pred HHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCc----
Confidence 34444445677899999999999999998764 4899999999999999987642 59999999976521
Q ss_pred CCCCCceeEEEEcCCccc---cHHHHHHHH-HhhcCCCCCcEEEEeCCC
Q 023411 190 NGEASSYDFAFVDAEKRM---YQEYFELLL-QLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~~~---~~~~l~~~~-~~~~~LkpgG~lv~dd~~ 234 (282)
+++||+|++....++ ....++.+. ++ |||||.+++....
T Consensus 101 ---~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~---LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 101 ---PRRYDNIVLTHVLEHIDDPVALLKRINDDW---LAEGGRLFLVCPN 143 (250)
T ss_dssp ---SSCEEEEEEESCGGGCSSHHHHHHHHHHTT---EEEEEEEEEEEEC
T ss_pred ---CCcccEEEEhhHHHhhcCHHHHHHHHHHHh---cCCCCEEEEEcCC
Confidence 578999999877544 445666666 66 9999999997643
No 121
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.48 E-value=2.9e-13 Score=117.62 Aligned_cols=116 Identities=12% Similarity=0.093 Sum_probs=89.7
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCcc------HHHHHHHHHHHhCCCCcEEEEEcc-hhhH-HH
Q 023411 114 LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDAR------SLEVAKKYYERAGVSHKVKIKHGL-AADS-LK 185 (282)
Q Consensus 114 l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~------~~~~a~~~~~~~g~~~~v~~~~gd-~~~~-l~ 185 (282)
.....++.+|||||||+|..+..+++..++.++|+++|+++. +++.+++++...++.++++++++| .... ++
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 117 (275)
T 3bkx_A 38 AWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP 117 (275)
T ss_dssp HHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG
T ss_pred HcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC
Confidence 334567889999999999999999998644689999999997 999999999988887789999998 3211 11
Q ss_pred HHHhCCCCCceeEEEEcCCccc---cHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 186 ALILNGEASSYDFAFVDAEKRM---YQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 186 ~l~~~~~~~~fDlV~id~~~~~---~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
. ..++||+|++.....+ ...+++.+..+ ++|||.+++.+...++
T Consensus 118 ~-----~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l---~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 118 I-----ADQHFDRVVLAHSLWYFASANALALLFKNM---AAVCDHVDVAEWSMQP 164 (275)
T ss_dssp G-----TTCCCSEEEEESCGGGSSCHHHHHHHHHHH---TTTCSEEEEEEECSSC
T ss_pred C-----CCCCEEEEEEccchhhCCCHHHHHHHHHHH---hCCCCEEEEEEecCCC
Confidence 1 1478999999776432 34466666776 8889999998766544
No 122
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.47 E-value=5e-13 Score=122.07 Aligned_cols=120 Identities=12% Similarity=0.066 Sum_probs=88.3
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHH-------HHhCCC-CcEEEEEcchhh
Q 023411 111 LAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYY-------ERAGVS-HKVKIKHGLAAD 182 (282)
Q Consensus 111 l~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-------~~~g~~-~~v~~~~gd~~~ 182 (282)
+...+...++.+|||||||+|..++.++...+ ..+++|||+++.+++.|+++. +.+|+. .++++++||+.+
T Consensus 165 il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~ 243 (438)
T 3uwp_A 165 MIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS 243 (438)
T ss_dssp HHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence 33444567888999999999999999998765 457999999999999998764 345663 689999999987
Q ss_pred HHHHHHhCCCCCceeEEEEcCCc--cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 183 SLKALILNGEASSYDFAFVDAEK--RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~~--~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
...... .+.||+||+.... .+....+..+.+. |||||.||+.+.+.+..
T Consensus 244 lp~~d~----~~~aDVVf~Nn~~F~pdl~~aL~Ei~Rv---LKPGGrIVssE~f~p~d 294 (438)
T 3uwp_A 244 EEWRER----IANTSVIFVNNFAFGPEVDHQLKERFAN---MKEGGRIVSSKPFAPLN 294 (438)
T ss_dssp HHHHHH----HHTCSEEEECCTTCCHHHHHHHHHHHTT---SCTTCEEEESSCSSCTT
T ss_pred Cccccc----cCCccEEEEcccccCchHHHHHHHHHHc---CCCCcEEEEeecccCCC
Confidence 532110 1479999987652 2333344445455 99999999987775543
No 123
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.47 E-value=1.5e-12 Score=120.90 Aligned_cols=159 Identities=18% Similarity=0.235 Sum_probs=116.7
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+......++..++...++.+|||+|||+|..+..++...+ +++|+++|+++.+++.++++++..|+. ++++++|+.
T Consensus 229 ~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~ 305 (429)
T 1sqg_A 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGR 305 (429)
T ss_dssp EECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTT
T ss_pred EeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchh
Confidence 45566677777777788889999999999999999999886 589999999999999999999998874 789999998
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccc-------------------------cHHHHHHHHHhhcCCCCCcEEEEeCCCCC
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLLLQIRVGGIIVIDNVLWH 236 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~-------------------------~~~~l~~~~~~~~~LkpgG~lv~dd~~~~ 236 (282)
+..+.+. .++||+|++|++... ....++.+.++ |||||++++....+.
T Consensus 306 ~~~~~~~----~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~---LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 306 YPSQWCG----EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH---LKTGGTLVYATCSVL 378 (429)
T ss_dssp CTHHHHT----TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGG---EEEEEEEEEEESCCC
T ss_pred hchhhcc----cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEEECCCC
Confidence 7654331 368999999865211 12456666666 999999999766443
Q ss_pred CcccCCcCCChhhHHHHHHHHHhhhCCCeEE-----------EEeec---CCceEEEEE
Q 023411 237 GKVADQMVNDAKTISIRNFNKNLMEDERVSI-----------SMVPI---GDGMTICQK 281 (282)
Q Consensus 237 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~lp~---~~Gl~~~~k 281 (282)
.. ++..-+..|++ +.++++. .++|- .||+-+|+-
T Consensus 379 ~~--------ene~~v~~~l~---~~~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~l 426 (429)
T 1sqg_A 379 PE--------ENSLQIKAFLQ---RTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 (429)
T ss_dssp GG--------GTHHHHHHHHH---HCTTCEECSSBCSSSBSEEECCCTTSCCSEEEEEE
T ss_pred hh--------hHHHHHHHHHH---hCCCCEEeCCCCCCCCeEEECCCCCCCCceEEEEE
Confidence 32 11233555554 3454443 45663 588888763
No 124
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.47 E-value=5.1e-14 Score=118.10 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=84.8
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHh
Q 023411 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (282)
Q Consensus 110 ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~ 189 (282)
++..+....++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...+ +++++++|+.+..+
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~---- 111 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFST---- 111 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCCC----
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCCC----
Confidence 3444445566789999999999999999886 3699999999999999999887533 69999999976531
Q ss_pred CCCCCceeEEEEcCCcccc------HHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 190 NGEASSYDFAFVDAEKRMY------QEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~~~~------~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.++||+|++....++. ...++.+.++ |+|||++++...
T Consensus 112 ---~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~---L~pgG~l~~~~~ 155 (216)
T 3ofk_A 112 ---AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKM---LAPGGHLVFGSA 155 (216)
T ss_dssp ---SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHT---EEEEEEEEEEEE
T ss_pred ---CCCccEEEEccHHHhCCCHHHHHHHHHHHHHH---cCCCCEEEEEec
Confidence 5899999998664332 3456677776 999999998653
No 125
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.47 E-value=1.9e-13 Score=117.48 Aligned_cols=105 Identities=11% Similarity=0.155 Sum_probs=84.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh--------CCCCcEEEEEcchhhHHHHHHhC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--------GVSHKVKIKHGLAADSLKALILN 190 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--------g~~~~v~~~~gd~~~~l~~l~~~ 190 (282)
++.+|||||||+|.+++.++...+ +.+|+|||+++.+++.++++++.+ ++. +++++++|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhc--
Confidence 556899999999999999999886 679999999999999999998876 665 59999999987444221
Q ss_pred CCCCceeEEEEcCCccc-----------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 191 GEASSYDFAFVDAEKRM-----------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~-----------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+.+.+|.|++...... ...++..+.++ |+|||+|++.
T Consensus 125 -~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~---LkpgG~l~~~ 172 (246)
T 2vdv_E 125 -EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYV---LKEGGVVYTI 172 (246)
T ss_dssp -CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHH---EEEEEEEEEE
T ss_pred -cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHH---cCCCCEEEEE
Confidence 2478999987543221 25788889998 9999999883
No 126
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.47 E-value=5.2e-13 Score=124.82 Aligned_cols=125 Identities=16% Similarity=0.231 Sum_probs=97.6
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
+......++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..|+. +++++++|+.+
T Consensus 243 ~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~ 321 (450)
T 2yxl_A 243 VQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARK 321 (450)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTC
T ss_pred ecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhh
Confidence 44455666677777788899999999999999999998874489999999999999999999999986 49999999876
Q ss_pred HHHHHHhCCCCCceeEEEEcCCcccc-------------------------HHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 183 SLKALILNGEASSYDFAFVDAEKRMY-------------------------QEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~~~~~-------------------------~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
..+.+ ..++||+|++|++.... ...++.+.++ |||||.+++....+
T Consensus 322 ~~~~~----~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~---LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 322 APEII----GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARL---VKPGGRLLYTTCSI 392 (450)
T ss_dssp CSSSS----CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTT---EEEEEEEEEEESCC
T ss_pred cchhh----ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHh---cCCCcEEEEEeCCC
Confidence 42211 12689999998652110 3456666666 99999999876543
No 127
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.47 E-value=1.8e-13 Score=116.65 Aligned_cols=115 Identities=23% Similarity=0.393 Sum_probs=92.5
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
..+.....+...+...++.+|||||||+|..+..+++..+ ++|+++|+++.+++.++++++..++.+ ++++.+|...
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~ 151 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDGSK 151 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGG
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCccc
Confidence 4555666666666777888999999999999999999875 789999999999999999999988875 9999999743
Q ss_pred HHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.++. ..+||+|+++....... +.+.+. |+|||.+++.-
T Consensus 152 ~~~~------~~~fD~Ii~~~~~~~~~---~~~~~~---L~pgG~lvi~~ 189 (235)
T 1jg1_A 152 GFPP------KAPYDVIIVTAGAPKIP---EPLIEQ---LKIGGKLIIPV 189 (235)
T ss_dssp CCGG------GCCEEEEEECSBBSSCC---HHHHHT---EEEEEEEEEEE
T ss_pred CCCC------CCCccEEEECCcHHHHH---HHHHHh---cCCCcEEEEEE
Confidence 2221 24699999988766543 356677 99999998853
No 128
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.47 E-value=2.4e-13 Score=118.97 Aligned_cols=104 Identities=17% Similarity=0.134 Sum_probs=89.4
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++++|||+|||+|.+++.+|... .++|+++|+||.+++.+++|++.+++.++++++++|+.+..+ .+.|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-------~~~~ 193 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------ENIA 193 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------CSCE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-------ccCC
Confidence 3578899999999999999999863 369999999999999999999999999999999999987643 5789
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|.|+++.+... ..++..+.++ |++||+|.++..
T Consensus 194 D~Vi~~~p~~~-~~~l~~a~~~---lk~gG~ih~~~~ 226 (278)
T 3k6r_A 194 DRILMGYVVRT-HEFIPKALSI---AKDGAIIHYHNT 226 (278)
T ss_dssp EEEEECCCSSG-GGGHHHHHHH---EEEEEEEEEEEE
T ss_pred CEEEECCCCcH-HHHHHHHHHH---cCCCCEEEEEee
Confidence 99999876443 3567788888 999999987654
No 129
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.46 E-value=1.6e-13 Score=116.74 Aligned_cols=104 Identities=13% Similarity=0.090 Sum_probs=85.1
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|..+..++. .+.+|+++|+++.+++.+++++...+...+++++++|+.+..+ .++||+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD~ 135 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP-------TELFDL 135 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-------SSCEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-------CCCeeE
Confidence 456999999999999998876 2679999999999999999999876666679999999976432 469999
Q ss_pred EEEcCCcc-----ccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 199 AFVDAEKR-----MYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 199 V~id~~~~-----~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
|++..... ....+++.+.++ |+|||++++.....
T Consensus 136 v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 136 IFDYVFFCAIEPEMRPAWAKSMYEL---LKPDGELITLMYPI 174 (235)
T ss_dssp EEEESSTTTSCGGGHHHHHHHHHHH---EEEEEEEEEEECCC
T ss_pred EEEChhhhcCCHHHHHHHHHHHHHH---CCCCcEEEEEEecc
Confidence 99865532 456788888888 99999999865443
No 130
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.46 E-value=1.3e-13 Score=116.77 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=83.2
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH--HHHHhCCCCCc
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KALILNGEASS 195 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~l~~~~~~~~ 195 (282)
.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++.+.. .+++++++|+.+.. ... .++
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~-----~~~ 143 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRAL-----VPK 143 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTT-----CCC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcc-----cCC
Confidence 35679999999999999999988754689999999999999998887653 46999999987632 111 368
Q ss_pred eeEEEEcCCccccH-HHHHHHHHhhcCCCCCcEEEEe
Q 023411 196 YDFAFVDAEKRMYQ-EYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 196 fDlV~id~~~~~~~-~~l~~~~~~~~~LkpgG~lv~d 231 (282)
||+|+++....... .++..+.++ |+|||.+++.
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVY---LKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHh---cCCCCEEEEE
Confidence 99999998744443 348888888 9999999886
No 131
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.46 E-value=9.6e-14 Score=118.04 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=87.1
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|+++++.+|+.++++++++|..+.+.. .++||+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~------~~~~D~ 93 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE------ADNIDT 93 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG------GGCCCE
T ss_pred CCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc------ccccCE
Confidence 567999999999999999998754 5689999999999999999999999999999999999875431 237999
Q ss_pred EEEcCC-ccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 199 AFVDAE-KRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 199 V~id~~-~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|++.+- ..-....++...+. |+++|.+|+...
T Consensus 94 IviaGmGg~lI~~IL~~~~~~---l~~~~~lIlqp~ 126 (230)
T 3lec_A 94 ITICGMGGRLIADILNNDIDK---LQHVKTLVLQPN 126 (230)
T ss_dssp EEEEEECHHHHHHHHHHTGGG---GTTCCEEEEEES
T ss_pred EEEeCCchHHHHHHHHHHHHH---hCcCCEEEEECC
Confidence 886543 33456667777777 999999999764
No 132
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.46 E-value=4.4e-13 Score=121.40 Aligned_cols=120 Identities=19% Similarity=0.212 Sum_probs=98.2
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+.+..+..+..++...++.+|||+|||+|.+++.++...++..+++|+|+++.+++.|+++++.+|+. +++++++|+.
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~ 264 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADAR 264 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGG
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChh
Confidence 456667777777777778889999999999999999997633689999999999999999999999998 7999999998
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccc-----------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRM-----------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~-----------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+.... .+.||+|++|.+... +..+++.+.++ |+|||.+++-
T Consensus 265 ~~~~~------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~---LkpgG~l~i~ 316 (354)
T 3tma_A 265 HLPRF------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALAL---LPPGGRVALL 316 (354)
T ss_dssp GGGGT------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHT---SCTTCEEEEE
T ss_pred hCccc------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHh---cCCCcEEEEE
Confidence 75332 367899999876321 24566667777 9999999883
No 133
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.46 E-value=6.1e-13 Score=130.52 Aligned_cols=116 Identities=20% Similarity=0.259 Sum_probs=94.8
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHHHHhCC
Q 023411 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNG 191 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~l~~l~~~~ 191 (282)
.+....++++|||+|||+|.+++.++... ..+|+++|+|+.+++.++++++.+|+. ++++++++|+.+.++..
T Consensus 533 ~l~~~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~---- 606 (703)
T 3v97_A 533 MLGQMSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---- 606 (703)
T ss_dssp HHHHHCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC----
T ss_pred HHHHhcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc----
Confidence 34445678899999999999999999742 357999999999999999999999997 68999999999877654
Q ss_pred CCCceeEEEEcCCc--------------cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 192 EASSYDFAFVDAEK--------------RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 192 ~~~~fDlV~id~~~--------------~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
.++||+|++|++. ..+..++..+.++ |+|||+|++........
T Consensus 607 -~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~---LkpgG~L~~s~~~~~~~ 663 (703)
T 3v97_A 607 -NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL---LRAGGTIMFSNNKRGFR 663 (703)
T ss_dssp -CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHH---EEEEEEEEEEECCTTCC
T ss_pred -CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHh---cCCCcEEEEEECCcccc
Confidence 5799999999862 1245567777777 99999999987664443
No 134
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.46 E-value=8.1e-14 Score=121.83 Aligned_cols=111 Identities=21% Similarity=0.234 Sum_probs=87.1
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh-CCCCcEEEEEcchhhHHHHH
Q 023411 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-GVSHKVKIKHGLAADSLKAL 187 (282)
Q Consensus 109 ~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g~~~~v~~~~gd~~~~l~~l 187 (282)
.++...+...++.+|||+|||+|..+..+++.+.++++|+++|+++++++.++++++.. |. ++++++++|+.+..+
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~-- 176 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFIS-- 176 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCC--
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCc--
Confidence 34445556667889999999999999999998544689999999999999999999887 74 469999999976321
Q ss_pred HhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 188 ILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 188 ~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.++||+|+++.. +...+++.+.++ |+|||++++..
T Consensus 177 -----~~~fD~Vi~~~~--~~~~~l~~~~~~---LkpgG~l~i~~ 211 (275)
T 1yb2_A 177 -----DQMYDAVIADIP--DPWNHVQKIASM---MKPGSVATFYL 211 (275)
T ss_dssp -----SCCEEEEEECCS--CGGGSHHHHHHT---EEEEEEEEEEE
T ss_pred -----CCCccEEEEcCc--CHHHHHHHHHHH---cCCCCEEEEEe
Confidence 468999999654 334668888888 99999999864
No 135
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.45 E-value=4.6e-13 Score=117.27 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=84.4
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...++ +++++++|+.+... .++
T Consensus 117 ~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-------~~~ 184 (286)
T 3m70_A 117 KIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-------QEN 184 (286)
T ss_dssp HHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-------CSC
T ss_pred hccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-------cCC
Confidence 3347789999999999999999986 46999999999999999999998887 69999999976422 478
Q ss_pred eeEEEEcCCc-----cccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 196 YDFAFVDAEK-----RMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 196 fDlV~id~~~-----~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
||+|++.... .....+++.+.++ |+|||++++-.
T Consensus 185 fD~i~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~i~~ 223 (286)
T 3m70_A 185 YDFIVSTVVFMFLNRERVPSIIKNMKEH---TNVGGYNLIVA 223 (286)
T ss_dssp EEEEEECSSGGGSCGGGHHHHHHHHHHT---EEEEEEEEEEE
T ss_pred ccEEEEccchhhCCHHHHHHHHHHHHHh---cCCCcEEEEEE
Confidence 9999998753 3345678888887 99999976643
No 136
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.45 E-value=1.1e-13 Score=118.25 Aligned_cols=105 Identities=21% Similarity=0.200 Sum_probs=83.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++++...+ ..+++++++|+.+... ..++||+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~------~~~~fD~ 149 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTP------EPDSYDV 149 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCC------CSSCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCC------CCCCEEE
Confidence 57899999999999999988764 3699999999999999999987764 3468999999865421 1468999
Q ss_pred EEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 199 AFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 199 V~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
|++.....+ ...+++.+.++ |+|||++++.+...
T Consensus 150 v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 150 IWIQWVIGHLTDQHLAEFLRRCKGS---LRPNGIIVIKDNMA 188 (241)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEEEB
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHh---cCCCeEEEEEEccC
Confidence 999877443 33567777777 99999999865443
No 137
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.45 E-value=3.9e-13 Score=114.37 Aligned_cols=108 Identities=12% Similarity=0.174 Sum_probs=83.5
Q ss_pred HHHHHHHhhc--CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH
Q 023411 109 QLLAMLVQIL--GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 186 (282)
Q Consensus 109 ~ll~~l~~~~--~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~ 186 (282)
..+..++... ++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...+. +++++++|+.+..
T Consensus 25 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~-- 97 (246)
T 1y8c_A 25 DFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN-- 97 (246)
T ss_dssp HHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC--
T ss_pred HHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC--
Confidence 3344444433 6789999999999999999886 46899999999999999999988765 5899999987542
Q ss_pred HHhCCCCCceeEEEEcC-Ccccc------HHHHHHHHHhhcCCCCCcEEEEe
Q 023411 187 LILNGEASSYDFAFVDA-EKRMY------QEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 187 l~~~~~~~~fDlV~id~-~~~~~------~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
. .++||+|++.. ..++. ...++.+.++ |+|||+++++
T Consensus 98 ~-----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~---L~pgG~l~~~ 141 (246)
T 1y8c_A 98 I-----NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNH---LKEGGVFIFD 141 (246)
T ss_dssp C-----SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTT---EEEEEEEEEE
T ss_pred c-----cCCceEEEEcCccccccCCHHHHHHHHHHHHHh---cCCCcEEEEE
Confidence 1 37899999987 54333 3455555555 9999999985
No 138
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.45 E-value=1.4e-13 Score=117.99 Aligned_cols=105 Identities=10% Similarity=0.141 Sum_probs=86.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|+|||||+|++++.++...+ ..+|+++|+++.+++.|+++++.+|+.++++++++|..+.+.. .++||+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~------~~~~D~ 93 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK------KDAIDT 93 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG------GGCCCE
T ss_pred CCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc------cccccE
Confidence 557999999999999999998754 5689999999999999999999999999999999999875431 135999
Q ss_pred EEEcC-CccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 199 AFVDA-EKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 199 V~id~-~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|++.+ ...-....++...+. |+++|.+|+...
T Consensus 94 IviagmGg~lI~~IL~~~~~~---L~~~~~lIlq~~ 126 (244)
T 3gnl_A 94 IVIAGMGGTLIRTILEEGAAK---LAGVTKLILQPN 126 (244)
T ss_dssp EEEEEECHHHHHHHHHHTGGG---GTTCCEEEEEES
T ss_pred EEEeCCchHHHHHHHHHHHHH---hCCCCEEEEEcC
Confidence 88643 334456677777777 999999999764
No 139
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.45 E-value=1.4e-12 Score=117.64 Aligned_cols=111 Identities=13% Similarity=0.123 Sum_probs=91.3
Q ss_pred cC-CCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LG-AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~-~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
.+ +.+|||||||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|..+..+.. .++|
T Consensus 177 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~ 249 (352)
T 3mcz_A 177 FARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE-----GGAA 249 (352)
T ss_dssp GTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-----TCCE
T ss_pred cCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-----CCCc
Confidence 44 78999999999999999999987 689999999 8999999999999998889999999997643112 4679
Q ss_pred eEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 197 DFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 197 DlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
|+|++....+++ ...++.+.+. |+|||.+++.+..++..
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~---L~pgG~l~i~e~~~~~~ 293 (352)
T 3mcz_A 250 DVVMLNDCLHYFDAREAREVIGHAAGL---VKPGGALLILTMTMNDD 293 (352)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHT---EEEEEEEEEEEECCCTT
T ss_pred cEEEEecccccCCHHHHHHHHHHHHHH---cCCCCEEEEEEeccCCC
Confidence 999997765432 4566666666 99999999887766554
No 140
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.44 E-value=5.6e-13 Score=122.57 Aligned_cols=108 Identities=24% Similarity=0.372 Sum_probs=88.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++++|||+|||+|.+++.++.. + ..+|+++|+++.+++.|+++++.+++.++++++++|+.+.++.+... .++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~--~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK--GEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT--TCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh--CCCCCE
Confidence 7789999999999999999985 2 35999999999999999999999998767999999998876654322 368999
Q ss_pred EEEcCCc------------cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 199 AFVDAEK------------RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 199 V~id~~~------------~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|++|.+. ..+..++..+.++ |+|||++++...
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~lv~~~~ 336 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNL---VKDGGILVTCSC 336 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTT---EEEEEEEEEEEC
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHh---cCCCcEEEEEEC
Confidence 9999764 2344556666666 999998887544
No 141
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.44 E-value=2.6e-13 Score=124.25 Aligned_cols=118 Identities=22% Similarity=0.271 Sum_probs=91.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh-----C-CC-CcEEEEEcchhhHHHHHHh
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-----G-VS-HKVKIKHGLAADSLKALIL 189 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-----g-~~-~~v~~~~gd~~~~l~~l~~ 189 (282)
..++.+|||||||+|..+..+++..+++++|+++|+++.+++.++++++.. | .. .+++++++|+.+.......
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457789999999999999999998755789999999999999999998765 3 22 5799999999764210000
Q ss_pred CCCCCceeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 190 NGEASSYDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
....++||+|++..... +....++.+.++ |||||++++.++....
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~---LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRV---LRDGGELYFSDVYADR 208 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHH---EEEEEEEEEEEEEESS
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHH---cCCCCEEEEEEecccc
Confidence 01157999999987643 456778888888 9999999998766544
No 142
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.44 E-value=2.3e-13 Score=113.30 Aligned_cols=115 Identities=14% Similarity=0.143 Sum_probs=87.2
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH
Q 023411 107 QAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 186 (282)
Q Consensus 107 ~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~ 186 (282)
...++..+....++.+|||+|||+|..+..++... +.+|+++|+++.+++.+++++...+. +++++++|+.+..
T Consensus 11 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~-- 84 (209)
T 2p8j_A 11 LYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLP-- 84 (209)
T ss_dssp HHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCC--
T ss_pred HHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCC--
Confidence 34455555556678899999999999865555442 57999999999999999999887763 5899999987531
Q ss_pred HHhCCCCCceeEEEEcCCcc-----ccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 187 LILNGEASSYDFAFVDAEKR-----MYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 187 l~~~~~~~~fDlV~id~~~~-----~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
. ..++||+|++..... +....++.+.++ |+|||++++....
T Consensus 85 ~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 85 F----KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRV---LKPGGLACINFLT 130 (209)
T ss_dssp S----CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEEE
T ss_pred C----CCCceeEEEEcChHHhCCHHHHHHHHHHHHHH---cCCCcEEEEEEec
Confidence 1 147899999876533 345567777777 9999999997654
No 143
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.44 E-value=4.4e-13 Score=117.62 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCC---CcEEEEEcchh
Q 023411 105 PDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS---HKVKIKHGLAA 181 (282)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~---~~v~~~~gd~~ 181 (282)
.....++..++...++.+|||||||+|..+..++.. +.+|+++|+|+.+++.++++....+.. .++.+..+|+.
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 344456666666678889999999999999999986 459999999999999999887544332 35889999987
Q ss_pred hHHHHHHhCCCCCceeEEEEc-CCcc---c-------cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 182 DSLKALILNGEASSYDFAFVD-AEKR---M-------YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id-~~~~---~-------~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+....+. ..++||+|++. .... + ....++.+.++ |+|||++++..
T Consensus 120 ~~~~~~~---~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~ 175 (293)
T 3thr_A 120 TLDKDVP---AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASM---VRPGGLLVIDH 175 (293)
T ss_dssp GHHHHSC---CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHT---EEEEEEEEEEE
T ss_pred hCccccc---cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHH---cCCCeEEEEEe
Confidence 6543221 15799999996 4432 2 45577777777 99999999864
No 144
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.44 E-value=1e-12 Score=120.64 Aligned_cols=102 Identities=23% Similarity=0.360 Sum_probs=83.0
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++++|||+|||+|.+++.++.. ++.|+++|+|+.+++.++++++.+++.. ++.++|+.+.++.. .+.||+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~-----~~~fD~ 283 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL-----EGPFHH 283 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC-----CCCEEE
T ss_pred CCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh-----cCCCCE
Confidence 4789999999999999999985 3569999999999999999999999875 46699998876544 345999
Q ss_pred EEEcCCc------------cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 199 AFVDAEK------------RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 199 V~id~~~------------~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|++|.+. ..+..++..+.++ |+|||+|++...
T Consensus 284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~---LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 284 VLLDPPTLVKRPEELPAMKRHLVDLVREALRL---LAEEGFLWLSSC 327 (393)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHHHHHHHHHHT---EEEEEEEEEEEC
T ss_pred EEECCCcCCCCHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEEEC
Confidence 9999773 2345566666777 999999985433
No 145
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.44 E-value=3.6e-13 Score=114.18 Aligned_cols=112 Identities=18% Similarity=0.236 Sum_probs=88.9
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
..+.....+...+...++.+|||||||+|..+..++... .+|+++|+++.+++.+++++...+ +++++++|+.+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~ 127 (231)
T 1vbf_A 54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTL 127 (231)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGG
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccc
Confidence 344444455555566678899999999999999999874 699999999999999999987665 69999999976
Q ss_pred HHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.++. .++||+|+++...++.. +.+.++ |+|||++++..
T Consensus 128 ~~~~------~~~fD~v~~~~~~~~~~---~~~~~~---L~pgG~l~~~~ 165 (231)
T 1vbf_A 128 GYEE------EKPYDRVVVWATAPTLL---CKPYEQ---LKEGGIMILPI 165 (231)
T ss_dssp CCGG------GCCEEEEEESSBBSSCC---HHHHHT---EEEEEEEEEEE
T ss_pred cccc------CCCccEEEECCcHHHHH---HHHHHH---cCCCcEEEEEE
Confidence 3221 47899999998766553 356677 99999998864
No 146
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.44 E-value=5.5e-13 Score=110.58 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=80.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++ +|||||||+|..+..+++. +.+|+++|+++.+++.++++....+. +++++++|+.+.. . ..++||+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~----~~~~fD~ 97 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFD--I----VADAWEG 97 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBS--C----CTTTCSE
T ss_pred CC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcC--C----CcCCccE
Confidence 44 9999999999999999875 46999999999999999999988776 5999999987641 1 1478999
Q ss_pred EEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 199 AFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 199 V~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
|++..... ....+++.+.++ |+|||.+++.....
T Consensus 98 v~~~~~~~~~~~~~~~l~~~~~~---L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 98 IVSIFCHLPSSLRQQLYPKVYQG---LKPGGVFILEGFAP 134 (202)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTT---CCSSEEEEEEEECT
T ss_pred EEEEhhcCCHHHHHHHHHHHHHh---cCCCcEEEEEEecc
Confidence 99854322 334556666666 99999999986543
No 147
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.44 E-value=2.4e-13 Score=115.63 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=82.0
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.++++.+.. ++++++++|+.+...... . .++||
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~--~-~~~~D 145 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYAN--I-VEKVD 145 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTT--T-SCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccc--c-CccEE
Confidence 3567999999999999999999886 689999999999999999887643 569999999865211010 0 36899
Q ss_pred EEEEcCCc-cccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEK-RMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~-~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|+.+... .....+++.+.++ |+|||.+++.
T Consensus 146 ~v~~~~~~~~~~~~~l~~~~~~---LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQPNQAEILIKNAKWF---LKKGGYGMIA 177 (230)
T ss_dssp EEEECCCSTTHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred EEEEecCChhHHHHHHHHHHHh---CCCCcEEEEE
Confidence 99977542 2235668888888 9999999985
No 148
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.44 E-value=4.7e-13 Score=111.93 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=86.6
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHH
Q 023411 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI 188 (282)
Q Consensus 109 ~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~ 188 (282)
.++..+....++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++ .+. .+++++++|+.+..+
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~--- 104 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTP--- 104 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCC---
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCC---
Confidence 34555555667789999999999999999987 4799999999999999887 444 359999999976511
Q ss_pred hCCCCCceeEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 189 LNGEASSYDFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
.++||+|++....++ ...+++.+.++ |+|||.+++.+...
T Consensus 105 ----~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~---L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 105 ----DRQWDAVFFAHWLAHVPDDRFEAFWESVRSA---VAPGGVVEFVDVTD 149 (218)
T ss_dssp ----SSCEEEEEEESCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEECC
T ss_pred ----CCceeEEEEechhhcCCHHHHHHHHHHHHHH---cCCCeEEEEEeCCC
Confidence 589999999877444 25567777787 99999999876543
No 149
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.44 E-value=5.6e-13 Score=122.05 Aligned_cols=106 Identities=25% Similarity=0.371 Sum_probs=89.0
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||+|||+|.+++.++.. ..+|+++|+++.+++.|+++++.+++.+ ++++++|+.+.++.+... .++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~--~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKE--GERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHT--TCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhc--CCCeeE
Confidence 6779999999999999999987 3689999999999999999999999877 999999998877654322 368999
Q ss_pred EEEcCCc------------cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 199 AFVDAEK------------RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 199 V~id~~~------------~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|++|.+. ..+..++..+.++ |+|||++++...
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~ 326 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKL---LKEGGILATASC 326 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHT---EEEEEEEEEEEC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHh---cCCCCEEEEEEC
Confidence 9999864 2345566677777 999999988654
No 150
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.44 E-value=2.4e-13 Score=114.21 Aligned_cols=110 Identities=18% Similarity=0.160 Sum_probs=85.4
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHH
Q 023411 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI 188 (282)
Q Consensus 109 ~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~ 188 (282)
.++..+ ...++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++. .+++++++|+.+...
T Consensus 36 ~~l~~~-~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~--- 103 (220)
T 3hnr_A 36 DILEDV-VNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEV--- 103 (220)
T ss_dssp HHHHHH-HHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCC---
T ss_pred HHHHHh-hccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCC---
Confidence 334333 3347789999999999999999986 5799999999999999988764 468999999876421
Q ss_pred hCCCCCceeEEEEcCCccccHH-----HHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 189 LNGEASSYDFAFVDAEKRMYQE-----YFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~~~~~-----~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
.++||+|++....++... .++.+.++ |+|||.+++.+..+..
T Consensus 104 ----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 104 ----PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQL---LNKGGKIVFADTIFAD 150 (220)
T ss_dssp ----CSCCSEEEEESCGGGSCHHHHHHHHHHHHHH---SCTTCEEEEEEECBSS
T ss_pred ----CCCeEEEEECcchhcCChHHHHHHHHHHHHh---cCCCCEEEEEeccccC
Confidence 379999999877544322 67777777 9999999998765443
No 151
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.44 E-value=7.1e-13 Score=113.72 Aligned_cols=100 Identities=16% Similarity=0.234 Sum_probs=81.1
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++....+. +++++++|+.+... .++||
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~-------~~~fD 107 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAF-------KNEFD 107 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCC-------CSCEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhccc-------CCCcc
Confidence 35679999999999999999985 47999999999999999999988775 58999999976421 46899
Q ss_pred EEEEcCC-c-----cccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 198 FAFVDAE-K-----RMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 198 lV~id~~-~-----~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+|++... . ......++.+.++ |+|||+++++-
T Consensus 108 ~v~~~~~~~~~~~~~~~~~~l~~~~~~---L~pgG~li~~~ 145 (252)
T 1wzn_A 108 AVTMFFSTIMYFDEEDLRKLFSKVAEA---LKPGGVFITDF 145 (252)
T ss_dssp EEEECSSGGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEE
T ss_pred EEEEcCCchhcCCHHHHHHHHHHHHHH---cCCCeEEEEec
Confidence 9998532 1 2345567777777 99999999863
No 152
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.43 E-value=4.9e-13 Score=113.76 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=81.8
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH--HHHHhCCCCCc
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KALILNGEASS 195 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~l~~~~~~~~ 195 (282)
.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.+.++.+.. .+++++++|+.+.. +.. .++
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~-----~~~ 147 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRML-----IAM 147 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGG-----CCC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhccc-----CCc
Confidence 45679999999999999999998744689999999999888887777664 46999999997632 222 478
Q ss_pred eeEEEEcCCccc-cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 196 YDFAFVDAEKRM-YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 196 fDlV~id~~~~~-~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
||+|+++..... ...++..+.++ |+|||++++.
T Consensus 148 ~D~V~~~~~~~~~~~~~~~~~~~~---LkpgG~l~i~ 181 (233)
T 2ipx_A 148 VDVIFADVAQPDQTRIVALNAHTF---LRNGGHFVIS 181 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred EEEEEEcCCCccHHHHHHHHHHHH---cCCCeEEEEE
Confidence 999999876332 23456778888 9999999994
No 153
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.43 E-value=4.8e-12 Score=113.17 Aligned_cols=108 Identities=16% Similarity=0.285 Sum_probs=89.4
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++..| +.+++++|++ .+++.+++++...++.++++++.+|+.+. .. .+.||
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~-----~~~~D 234 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY-----GNDYD 234 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC-----CSCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC-----CCCCc
Confidence 5678999999999999999999986 6899999999 99999999999999888899999998753 11 34599
Q ss_pred EEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 198 FAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 198 lV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
+|++....++. ...++.+.+. |+|||.+++.+...+.
T Consensus 235 ~v~~~~~l~~~~~~~~~~~l~~~~~~---L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 235 LVLLPNFLHHFDVATCEQLLRKIKTA---LAVEGKVIVFDFIPNS 276 (335)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEECCCCT
T ss_pred EEEEcchhccCCHHHHHHHHHHHHHh---CCCCcEEEEEeecCCC
Confidence 99997664443 4677777777 9999988887665543
No 154
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.42 E-value=5.2e-13 Score=122.04 Aligned_cols=106 Identities=13% Similarity=0.172 Sum_probs=87.4
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++++|||||||+|..+..+++.. ..+|+++|++ .+++.|+++++.+++.++++++++|+.+... .++
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~ 129 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL-------PEK 129 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC-------SSC
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc-------CCc
Confidence 34567899999999999999999862 2599999999 9999999999999999999999999976421 378
Q ss_pred eeEEEEcCC------ccccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 196 YDFAFVDAE------KRMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 196 fDlV~id~~------~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
||+|+++.. ......++..+.++ |+|||+++++...
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~---LkpgG~li~~~~~ 171 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRW---LKPTGVMYPSHAR 171 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHH---EEEEEEEESSEEE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhh---CCCCeEEEEecCe
Confidence 999999652 12355577778888 9999999887654
No 155
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.42 E-value=2.2e-13 Score=115.43 Aligned_cols=116 Identities=16% Similarity=0.237 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHH--hhcCCCEEEEEcccccHHHHHHHHHCCC-----CCEEEEEecCccHHHHHHHHHHHhCC----CCc
Q 023411 104 SPDQAQLLAMLV--QILGAQRCIEVGVYTGYSSLAIALVLPE-----SGCLVACERDARSLEVAKKYYERAGV----SHK 172 (282)
Q Consensus 104 ~~~~~~ll~~l~--~~~~~~~VLEIG~G~G~~t~~la~~~~~-----~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~ 172 (282)
.|.....+...+ ...++.+|||||||+|+.+..+++..+. .++|+++|+++++++.+++++...+. ..+
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 444333333433 3556789999999999999999986542 26999999999999999999987662 236
Q ss_pred EEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 173 VKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 173 v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
++++++|..+..+. .++||+|+++...++.. +.+.++ |+|||.+++.
T Consensus 147 v~~~~~d~~~~~~~------~~~fD~I~~~~~~~~~~---~~~~~~---LkpgG~lvi~ 193 (227)
T 1r18_A 147 LLIVEGDGRKGYPP------NAPYNAIHVGAAAPDTP---TELINQ---LASGGRLIVP 193 (227)
T ss_dssp EEEEESCGGGCCGG------GCSEEEEEECSCBSSCC---HHHHHT---EEEEEEEEEE
T ss_pred eEEEECCcccCCCc------CCCccEEEECCchHHHH---HHHHHH---hcCCCEEEEE
Confidence 99999998763221 37899999998866543 567777 9999999985
No 156
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.42 E-value=6.9e-13 Score=121.33 Aligned_cols=114 Identities=18% Similarity=0.298 Sum_probs=89.8
Q ss_pred CHHHHHHHHHHHhh-----cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc
Q 023411 104 SPDQAQLLAMLVQI-----LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 178 (282)
Q Consensus 104 ~~~~~~ll~~l~~~-----~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g 178 (282)
.+....++..+... .++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++..+++. ++++++
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEc
Confidence 44444455555443 25679999999999999999986 469999999999999999999998875 899999
Q ss_pred chhhHHHHHHhCCCCCceeEEEEcCCcc--------ccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 179 LAADSLKALILNGEASSYDFAFVDAEKR--------MYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 179 d~~~~l~~l~~~~~~~~fDlV~id~~~~--------~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|+.+.... .++||+|+++.+.+ ....+++.+.++ |+|||.+++.
T Consensus 288 D~~~~~~~------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~---LkpGG~l~iv 339 (381)
T 3dmg_A 288 DVDEALTE------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAAR---LRPGGVFFLV 339 (381)
T ss_dssp STTTTSCT------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred chhhcccc------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHh---cCcCcEEEEE
Confidence 99765321 37999999986533 244677778888 9999999884
No 157
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.42 E-value=5.2e-13 Score=120.79 Aligned_cols=106 Identities=17% Similarity=0.190 Sum_probs=87.0
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++++|||||||+|..+..+++. + ..+|+|+|++ ++++.|+++++.+++.++++++++|+.+.. + ..++
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--~----~~~~ 133 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE--L----PVEK 133 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC--C----SSSC
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc--C----CCCc
Confidence 4567889999999999999999986 3 4699999999 599999999999999989999999997651 1 1479
Q ss_pred eeEEEEcCC------ccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 196 YDFAFVDAE------KRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 196 fDlV~id~~------~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
||+|+++.. ......++..+.++ |||||+++.+..
T Consensus 134 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~---LkpgG~li~~~~ 174 (349)
T 3q7e_A 134 VDIIISEWMGYCLFYESMLNTVLHARDKW---LAPDGLIFPDRA 174 (349)
T ss_dssp EEEEEECCCBBTBTBTCCHHHHHHHHHHH---EEEEEEEESCEE
T ss_pred eEEEEEccccccccCchhHHHHHHHHHHh---CCCCCEEccccc
Confidence 999998642 23456677888888 999999985543
No 158
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.42 E-value=1.5e-12 Score=118.58 Aligned_cols=109 Identities=14% Similarity=0.183 Sum_probs=90.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|+.+.. ..+|
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--------p~~~ 269 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI--------PDGA 269 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC--------CSSC
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC--------CCCc
Confidence 34678999999999999999999987 789999999 9999999999999998889999999997421 2489
Q ss_pred eEEEEcCCccccH-----HHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 197 DFAFVDAEKRMYQ-----EYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 197 DlV~id~~~~~~~-----~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
|+|++....+++. ..++.+.+. |+|||.+++.+..++..
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~---L~pgG~l~i~e~~~~~~ 313 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATA---MKPDSRLLVIDNLIDER 313 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTT---CCTTCEEEEEEEBCCSS
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHH---cCCCCEEEEEEeccCCC
Confidence 9999987754432 456666666 99999999988776553
No 159
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.41 E-value=6e-14 Score=122.07 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=79.0
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
.+++|||||||+|..+..+++. + .+|+++|+++++++.|++++... ++ .++++++.+|+.+.+ ++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---------~~ 139 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---------KK 139 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---------CC
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---------hh
Confidence 5679999999999999999987 4 89999999999999999876431 12 357999999997642 57
Q ss_pred eeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 196 YDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 196 fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
||+|++|.... ..+++.+.+. |+|||++++.
T Consensus 140 fD~Ii~d~~dp--~~~~~~~~~~---L~pgG~lv~~ 170 (262)
T 2cmg_A 140 YDLIFCLQEPD--IHRIDGLKRM---LKEDGVFISV 170 (262)
T ss_dssp EEEEEESSCCC--HHHHHHHHTT---EEEEEEEEEE
T ss_pred CCEEEECCCCh--HHHHHHHHHh---cCCCcEEEEE
Confidence 99999996533 3478888888 9999999995
No 160
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.41 E-value=4.4e-13 Score=112.92 Aligned_cols=102 Identities=12% Similarity=0.138 Sum_probs=82.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||+|||+|..+..+++.. .+++++|+++++++.++++....+ .+++++++|+.+.. . ..++||+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~----~~~~~D~ 106 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS--F----EDKTFDY 106 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC--S----CTTCEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC--C----CCCcEEE
Confidence 46799999999999999999864 399999999999999999998776 46999999987631 1 1468999
Q ss_pred EEEcCC--ccc---cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 199 AFVDAE--KRM---YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 199 V~id~~--~~~---~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|++... ..+ ....++.+.++ |+|||.+++.+..
T Consensus 107 v~~~~~~~~~~~~~~~~~l~~~~~~---L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 107 VIFIDSIVHFEPLELNQVFKEVRRV---LKPSGKFIMYFTD 144 (227)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHH---EEEEEEEEEEEEC
T ss_pred EEEcCchHhCCHHHHHHHHHHHHHH---cCCCcEEEEEecC
Confidence 999876 333 34567777777 9999999887554
No 161
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.41 E-value=9.1e-13 Score=115.51 Aligned_cols=105 Identities=11% Similarity=0.055 Sum_probs=84.3
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..+..+++. + ..+|+++|+++.+++.+++++...+...+++++++|+.+.... ..++||
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~~fD 135 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-----LGKEFD 135 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-----CSSCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-----CCCCcC
Confidence 57789999999999999998876 2 4699999999999999999999888777899999998764110 157899
Q ss_pred EEEEcCCccc-------cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 198 FAFVDAEKRM-------YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 198 lV~id~~~~~-------~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+|++....++ ...+++.+.++ |+|||.+++..
T Consensus 136 ~v~~~~~l~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~ 174 (298)
T 1ri5_A 136 VISSQFSFHYAFSTSESLDIAQRNIARH---LRPGGYFIMTV 174 (298)
T ss_dssp EEEEESCGGGGGSSHHHHHHHHHHHHHT---EEEEEEEEEEE
T ss_pred EEEECchhhhhcCCHHHHHHHHHHHHHh---cCCCCEEEEEE
Confidence 9999866422 34456666666 99999999864
No 162
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.41 E-value=4e-13 Score=115.43 Aligned_cols=99 Identities=13% Similarity=0.190 Sum_probs=81.1
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.++++.. ..+++++++|+.+.. . ..++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~-~-----~~~~fD 110 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIA-I-----EPDAYN 110 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCC-C-----CTTCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCC-C-----CCCCeE
Confidence 4678999999999999999998643 399999999999999998765 356999999986532 1 147999
Q ss_pred EEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|++..... +....++.+.++ |+|||.+++.
T Consensus 111 ~v~~~~~l~~~~~~~~~l~~~~~~---LkpgG~l~~~ 144 (253)
T 3g5l_A 111 VVLSSLALHYIASFDDICKKVYIN---LKSSGSFIFS 144 (253)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHH---EEEEEEEEEE
T ss_pred EEEEchhhhhhhhHHHHHHHHHHH---cCCCcEEEEE
Confidence 999987643 456677888888 9999999996
No 163
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.41 E-value=2.3e-13 Score=117.12 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=81.3
Q ss_pred CCCEEEEEcccccHHHHHHHHH--CCCCCEEEEEecCccHHHHHHHHHHHh---CCCCc---------------------
Q 023411 119 GAQRCIEVGVYTGYSSLAIALV--LPESGCLVACERDARSLEVAKKYYERA---GVSHK--------------------- 172 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~--~~~~~~v~~iD~s~~~~~~a~~~~~~~---g~~~~--------------------- 172 (282)
++.+|||+|||+|.++..++.. .+ +.+|+++|+|+.+++.|++++... ++.++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 4569999999999999999987 33 578999999999999999988765 44333
Q ss_pred ----EE-------------EEEcchhhHHHHHHhCCCCCceeEEEEcCCcc------------ccHHHHHHHHHhhcCCC
Q 023411 173 ----VK-------------IKHGLAADSLKALILNGEASSYDFAFVDAEKR------------MYQEYFELLLQLLLQIR 223 (282)
Q Consensus 173 ----v~-------------~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~------------~~~~~l~~~~~~~~~Lk 223 (282)
++ ++++|+.+..+..... ...+||+|+++.+.. .+..+++.+.++ |+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~---Lk 205 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVL-AGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASA---LP 205 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH-TTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHH---SC
T ss_pred hhhhhhhhccccccccccceeeccccccccccccc-CCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHh---cC
Confidence 66 9999987643210000 035899999986521 133677777787 99
Q ss_pred CCcEEEEeC
Q 023411 224 VGGIIVIDN 232 (282)
Q Consensus 224 pgG~lv~dd 232 (282)
|||++++.+
T Consensus 206 pgG~l~~~~ 214 (250)
T 1o9g_A 206 AHAVIAVTD 214 (250)
T ss_dssp TTCEEEEEE
T ss_pred CCcEEEEeC
Confidence 999999843
No 164
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.40 E-value=3e-12 Score=115.99 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=87.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++.+|||||||+|..+..+++..| +.+++++|+ +.+++.++++++..++.++++++.+|+.+. + ...
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-------~~~ 256 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE-S-------YPE 256 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS-C-------CCC
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC-C-------CCC
Confidence 345678999999999999999999987 689999999 999999999999999888899999999764 1 233
Q ss_pred eeEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCC
Q 023411 196 YDFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWH 236 (282)
Q Consensus 196 fDlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~ 236 (282)
+|+|++....+++ ...++.+.+. |+|||.+++-+...+
T Consensus 257 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~---L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 ADAVLFCRILYSANEQLSTIMCKKAFDA---MRSGGRLLILDMVID 299 (359)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTT---CCTTCEEEEEEECCC
T ss_pred CCEEEEechhccCCHHHHHHHHHHHHHh---cCCCCEEEEEecccC
Confidence 4999998775443 4456666666 999999977665544
No 165
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.40 E-value=2.5e-13 Score=116.79 Aligned_cols=99 Identities=14% Similarity=0.126 Sum_probs=80.6
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..+..+++..| +++|+++|+++.+++.++++ ..+++++++|+.+.. . .++||
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~--~-----~~~fD 97 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK--P-----AQKAD 97 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC--C-----SSCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC--c-----cCCcC
Confidence 4667999999999999999999875 67999999999999999887 235899999987643 1 57899
Q ss_pred EEEEcCCccc---cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 198 FAFVDAEKRM---YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 198 lV~id~~~~~---~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+|++....++ ....++.+.++ |+|||.+++...
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~~~~~ 133 (259)
T 2p35_A 98 LLYANAVFQWVPDHLAVLSQLMDQ---LESGGVLAVQMP 133 (259)
T ss_dssp EEEEESCGGGSTTHHHHHHHHGGG---EEEEEEEEEEEE
T ss_pred EEEEeCchhhCCCHHHHHHHHHHh---cCCCeEEEEEeC
Confidence 9999876443 45566666666 999999998653
No 166
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.40 E-value=3.6e-12 Score=111.47 Aligned_cols=110 Identities=10% Similarity=0.045 Sum_probs=83.4
Q ss_pred CCCEEEEEcccc---cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH-----HhC
Q 023411 119 GAQRCIEVGVYT---GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL-----ILN 190 (282)
Q Consensus 119 ~~~~VLEIG~G~---G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l-----~~~ 190 (282)
+..+|||||||+ |..+..+.+..| +++|+++|+|+.+++.+++++.. ..+++++++|+.+....+ ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 457999999999 988777766665 68999999999999999998842 357999999997642110 011
Q ss_pred CCCCceeEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 191 GEASSYDFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
.+.++||+|++....++ ....++.+.+. |+|||+|++.+...
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~---L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDA---LAPGSYLFMTSLVD 199 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHH---SCTTCEEEEEEEBC
T ss_pred CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHh---CCCCcEEEEEEecC
Confidence 11358999998765332 45678888888 99999999987654
No 167
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.40 E-value=1e-12 Score=118.54 Aligned_cols=104 Identities=14% Similarity=0.147 Sum_probs=84.0
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
....++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++.+++.++++++++|+.+.. + ..+
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~----~~~ 130 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH--L----PVE 130 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC--C----SCS
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc--C----CCC
Confidence 34567889999999999999999986 3 36999999996 99999999999999788999999997641 1 137
Q ss_pred ceeEEEEcCC---c---cccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 195 SYDFAFVDAE---K---RMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 195 ~fDlV~id~~---~---~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+||+|+++.. . ......+..+.++ |+|||+++.
T Consensus 131 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~---LkpgG~lip 169 (340)
T 2fyt_A 131 KVDVIISEWMGYFLLFESMLDSVLYAKNKY---LAKGGSVYP 169 (340)
T ss_dssp CEEEEEECCCBTTBTTTCHHHHHHHHHHHH---EEEEEEEES
T ss_pred cEEEEEEcCchhhccCHHHHHHHHHHHHhh---cCCCcEEEc
Confidence 8999998752 1 2345567777788 999999984
No 168
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.40 E-value=2.8e-12 Score=116.54 Aligned_cols=110 Identities=14% Similarity=0.124 Sum_probs=90.6
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH-HHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL-KALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l-~~l~~~~~~~~f 196 (282)
.++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|+.+.. + + .++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~-----p~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-F-----PTGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-C-----CCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-C-----CCCc
Confidence 5778999999999999999999987 689999999 9999999999998888788999999987531 1 1 3689
Q ss_pred eEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 197 DFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 197 DlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
|+|++....++ ....++.+.+. |+|||.|++.+..++..
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~---L~pgG~l~i~e~~~~~~ 293 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQS---IGKDSKVYIMETLWDRQ 293 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHH---CCTTCEEEEEECCTTSC
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHh---cCCCcEEEEEeeccCCc
Confidence 99998765443 24567777777 99999998887776653
No 169
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=1.1e-12 Score=108.79 Aligned_cols=110 Identities=15% Similarity=0.090 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH
Q 023411 107 QAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 186 (282)
Q Consensus 107 ~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~ 186 (282)
...++..+.... +.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++. .+++++++|+.+.. .
T Consensus 30 ~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~-~ 98 (203)
T 3h2b_A 30 DRVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLS-D 98 (203)
T ss_dssp THHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGG-G
T ss_pred HHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccc-c
Confidence 344555555443 779999999999999999986 468999999999999998873 25899999997642 1
Q ss_pred HHhCCCCCceeEEEEcCCcc-----ccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 187 LILNGEASSYDFAFVDAEKR-----MYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 187 l~~~~~~~~fDlV~id~~~~-----~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
. .++||+|++..... +....++.+.++ |+|||.+++.....
T Consensus 99 ~-----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~---L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 99 S-----PKRWAGLLAWYSLIHMGPGELPDALVALRMA---VEDGGGLLMSFFSG 144 (203)
T ss_dssp S-----CCCEEEEEEESSSTTCCTTTHHHHHHHHHHT---EEEEEEEEEEEECC
T ss_pred C-----CCCeEEEEehhhHhcCCHHHHHHHHHHHHHH---cCCCcEEEEEEccC
Confidence 1 58999999976533 456677888777 99999999976543
No 170
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.40 E-value=4e-13 Score=116.51 Aligned_cols=95 Identities=18% Similarity=0.224 Sum_probs=75.2
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
...+|||||||+|..+..++.. ..+|+|+|+|+.+++.|++ ..+++++++++.+.. + .+++||+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~--~----~~~sfD~ 102 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTG--L----PPASVDV 102 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCC--C----CSSCEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhc--c----cCCcccE
Confidence 3468999999999999999976 3699999999999877653 246999999986541 1 1689999
Q ss_pred EEEcCCcc--ccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 199 AFVDAEKR--MYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 199 V~id~~~~--~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
|++....+ +...++.++.++ |||||+|++-.
T Consensus 103 v~~~~~~h~~~~~~~~~e~~rv---LkpgG~l~~~~ 135 (257)
T 4hg2_A 103 AIAAQAMHWFDLDRFWAELRRV---ARPGAVFAAVT 135 (257)
T ss_dssp EEECSCCTTCCHHHHHHHHHHH---EEEEEEEEEEE
T ss_pred EEEeeehhHhhHHHHHHHHHHH---cCCCCEEEEEE
Confidence 99875532 355678888888 99999998743
No 171
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.39 E-value=1.2e-12 Score=117.35 Aligned_cols=107 Identities=12% Similarity=0.078 Sum_probs=89.0
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|+.+.. ..+||+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------p~~~D~ 238 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL--------PAGAGG 238 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------CCSCSE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC--------CCCCcE
Confidence 467999999999999999999987 689999999 9999999999999998889999999996421 238999
Q ss_pred EEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 199 AFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 199 V~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
|++....++ ....++.+.+. |+|||.|++.+..++..
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~---L~pgG~l~i~e~~~~~~ 280 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEA---AGSGGVVLVIEAVAGDE 280 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHH---HTTTCEEEEEECCCC--
T ss_pred EEEehhhccCCHHHHHHHHHHHHHh---cCCCCEEEEEeecCCCC
Confidence 999776443 24567777777 99999999988776654
No 172
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.39 E-value=6.4e-13 Score=113.42 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=79.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|.++..+++. +.+|+++|+++.+++.++++ ++++++|..+.+..+. +++|
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~----~~~f 102 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLP----DKYL 102 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSC----TTCB
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcC----CCCe
Confidence 346689999999999999999986 46899999999999888764 7889999877543221 5899
Q ss_pred eEEEEcCCcc-----ccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 197 DFAFVDAEKR-----MYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 197 DlV~id~~~~-----~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|+|++....+ +...+++.+.++ |||||++++....
T Consensus 103 D~i~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~ 142 (240)
T 3dli_A 103 DGVMISHFVEHLDPERLFELLSLCYSK---MKYSSYIVIESPN 142 (240)
T ss_dssp SEEEEESCGGGSCGGGHHHHHHHHHHH---BCTTCCEEEEEEC
T ss_pred eEEEECCchhhCCcHHHHHHHHHHHHH---cCCCcEEEEEeCC
Confidence 9999976633 346788888888 9999999997654
No 173
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.39 E-value=1.1e-12 Score=113.39 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=78.2
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++. +++++++|+.+... .++||+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~~fD~ 113 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-------GRRFSA 113 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC-------SCCEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc-------cCCcCE
Confidence 4579999999999999999876 3689999999999999988753 58999999976421 479999
Q ss_pred EEEcC-Cccc------cHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 199 AFVDA-EKRM------YQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 199 V~id~-~~~~------~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
|++.. ...+ ...+++.+.++ |+|||+++++....
T Consensus 114 v~~~~~~l~~~~~~~~~~~~l~~~~~~---L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 114 VTCMFSSIGHLAGQAELDAALERFAAH---VLPDGVVVVEPWWF 154 (263)
T ss_dssp EEECTTGGGGSCHHHHHHHHHHHHHHT---EEEEEEEEECCCCC
T ss_pred EEEcCchhhhcCCHHHHHHHHHHHHHh---cCCCcEEEEEeccC
Confidence 99986 4333 33456666666 99999999986543
No 174
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.39 E-value=4.1e-12 Score=116.02 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=89.1
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh---------------CCCCcEEEEEcchhhH
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA---------------GVSHKVKIKHGLAADS 183 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~---------------g~~~~v~~~~gd~~~~ 183 (282)
++.+|||+|||+|..++.++...+ ..+|+++|+++++++.+++|++.+ ++.+ ++++++|+.+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHH
Confidence 678999999999999999999876 568999999999999999999999 8765 99999999887
Q ss_pred HHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 184 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 184 l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+... .++||+|++|+. .....+++.+.+. |++||++++..
T Consensus 125 ~~~~-----~~~fD~I~lDP~-~~~~~~l~~a~~~---lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAER-----HRYFHFIDLDPF-GSPMEFLDTALRS---AKRRGILGVTA 164 (378)
T ss_dssp HHHS-----TTCEEEEEECCS-SCCHHHHHHHHHH---EEEEEEEEEEE
T ss_pred HHhc-----cCCCCEEEeCCC-CCHHHHHHHHHHh---cCCCCEEEEEe
Confidence 6543 368999999874 3446788888888 99999998864
No 175
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.39 E-value=1.4e-12 Score=118.69 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=84.4
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++++|||||||+|..++.+|++. ..+|++||.++ +++.|++.++.+|+.++|+++++++.+.. + +++
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--l-----pe~ 149 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--L-----PEQ 149 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--C-----SSC
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--C-----Ccc
Confidence 34578899999999999999888753 25899999986 88999999999999999999999997652 2 579
Q ss_pred eeEEEEcCC------ccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 196 YDFAFVDAE------KRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 196 fDlV~id~~------~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+|+|+...- ......++....++ |+|||+++.+..
T Consensus 150 ~DvivsE~~~~~l~~e~~l~~~l~a~~r~---Lkp~G~~iP~~a 190 (376)
T 4hc4_A 150 VDAIVSEWMGYGLLHESMLSSVLHARTKW---LKEGGLLLPASA 190 (376)
T ss_dssp EEEEECCCCBTTBTTTCSHHHHHHHHHHH---EEEEEEEESCEE
T ss_pred ccEEEeecccccccccchhhhHHHHHHhh---CCCCceECCccc
Confidence 999997422 22455666667777 999999887644
No 176
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.39 E-value=1.3e-12 Score=112.37 Aligned_cols=101 Identities=23% Similarity=0.217 Sum_probs=81.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++ .+...+++++++|+.+.. + .+++|
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~--~----~~~~f 105 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIP--L----PDESV 105 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCC--S----CTTCE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCC--C----CCCCe
Confidence 356789999999999999999975 479999999999999999987 233456999999986532 1 14789
Q ss_pred eEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 197 DFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 197 DlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|+|++....+ +....++.+.++ |+|||.+++.
T Consensus 106 D~v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~~~ 140 (263)
T 2yqz_A 106 HGVIVVHLWHLVPDWPKVLAEAIRV---LKPGGALLEG 140 (263)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHH---EEEEEEEEEE
T ss_pred eEEEECCchhhcCCHHHHHHHHHHH---CCCCcEEEEE
Confidence 9999987644 346678888888 9999999986
No 177
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.39 E-value=8.1e-13 Score=110.39 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=79.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++ +++++.+|+.+.. . .++|
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--~-----~~~f 103 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--A-----IDAY 103 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC--C-----CSCE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC--C-----CCcE
Confidence 456789999999999999999986 479999999999999999887 3677888886543 1 6899
Q ss_pred eEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 197 DFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 197 DlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|+|++.....+ ...+++.+.++ |+|||++++....
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~~~ 143 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRA---LKPGGLFYASYKS 143 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEEC
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHh---cCCCcEEEEEEcC
Confidence 99999876443 44677788887 9999999997443
No 178
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.38 E-value=2.1e-12 Score=115.83 Aligned_cols=107 Identities=21% Similarity=0.239 Sum_probs=85.5
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
......++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|+++++.+++.++++++++|+.+.. + .
T Consensus 32 ~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~----~ 102 (328)
T 1g6q_1 32 QNKDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--L----P 102 (328)
T ss_dssp HHHHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--C----S
T ss_pred hhHhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--C----C
Confidence 3344567789999999999999999985 3 3699999999 599999999999999889999999997642 1 1
Q ss_pred CCceeEEEEcCC------ccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 193 ASSYDFAFVDAE------KRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 193 ~~~fDlV~id~~------~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.++||+|+++.. .......+..+.++ |+|||+++.+
T Consensus 103 ~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~---LkpgG~li~~ 144 (328)
T 1g6q_1 103 FPKVDIIISEWMGYFLLYESMMDTVLYARDHY---LVEGGLIFPD 144 (328)
T ss_dssp SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHH---EEEEEEEESC
T ss_pred CCcccEEEEeCchhhcccHHHHHHHHHHHHhh---cCCCeEEEEe
Confidence 378999998743 22345677777788 9999999854
No 179
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.38 E-value=1.7e-12 Score=117.44 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=83.1
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
....++.+|||||||+|..+..+++. + ..+|+++|+++ +++.++++++.+++.++++++++|+.+.. + .+
T Consensus 46 l~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~-----~~ 115 (348)
T 2y1w_A 46 HTDFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L-----PE 115 (348)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C-----SS
T ss_pred cccCCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--C-----CC
Confidence 34457889999999999999999885 2 46999999996 88999999999999888999999997641 1 36
Q ss_pred ceeEEEEcCCc-----cccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 195 SYDFAFVDAEK-----RMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 195 ~fDlV~id~~~-----~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+||+|++.... +.....+..+.++ |+|||++++.
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~---LkpgG~li~~ 154 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKY---LKPSGNMFPT 154 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGG---EEEEEEEESC
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhh---cCCCeEEEEe
Confidence 89999997542 2344555555666 9999999854
No 180
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.38 E-value=6.2e-13 Score=114.01 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=82.1
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++++... .+++++++|+.+.. . ..++||
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~--~----~~~~fD 160 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETAT--L----PPNTYD 160 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCC--C----CSSCEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCC--C----CCCCeE
Confidence 467899999999999999998875 368999999999999999987643 46999999987631 1 147899
Q ss_pred EEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 198 FAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 198 lV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+|++....++ ...+++.+.++ |+|||++++.+.
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~---LkpgG~l~i~~~ 198 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQA---LTPNGYIFFKEN 198 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHh---cCCCeEEEEEec
Confidence 9999877444 34567777777 999999998764
No 181
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.37 E-value=1.3e-12 Score=119.59 Aligned_cols=106 Identities=13% Similarity=0.157 Sum_probs=90.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCc-EEEEEcchhhHHH-HHHhCCCCCc
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK-VKIKHGLAADSLK-ALILNGEASS 195 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~-v~~~~gd~~~~l~-~l~~~~~~~~ 195 (282)
.++.+|||++||+|.+++.+++..+...+|+++|+++.+++.+++|++.+++.++ ++++++|+.+.+. .. .++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~-----~~~ 125 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW-----GFG 125 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC-----SSC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh-----CCC
Confidence 3567999999999999999999764126899999999999999999999999887 9999999988765 43 468
Q ss_pred eeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 196 YDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 196 fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
||+|++|+ ......+++.+.++ |++||+|++..
T Consensus 126 fD~V~lDP-~g~~~~~l~~a~~~---Lk~gGll~~t~ 158 (392)
T 3axs_A 126 FDYVDLDP-FGTPVPFIESVALS---MKRGGILSLTA 158 (392)
T ss_dssp EEEEEECC-SSCCHHHHHHHHHH---EEEEEEEEEEE
T ss_pred CcEEEECC-CcCHHHHHHHHHHH---hCCCCEEEEEe
Confidence 99999998 34445788888888 99999998854
No 182
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.37 E-value=2.5e-12 Score=114.12 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=78.0
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC-----cEEEEEcchhhH--HHHHHhCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-----KVKIKHGLAADS--LKALILNG 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-----~v~~~~gd~~~~--l~~l~~~~ 191 (282)
++.+|||||||+|..+..++..- .++|+|+|+|+++++.|++.....+... ++++.++|.... ...+....
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 46799999999998666555431 4799999999999999999988766432 267877776211 01221111
Q ss_pred CCCceeEEEEcCCc------cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 192 EASSYDFAFVDAEK------RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 192 ~~~~fDlV~id~~~------~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
..++||+|++.... .+....++.+.++ |||||++++...
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~---LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSEL---TASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHH---cCCCCEEEEEeC
Confidence 24799999975432 3446788888888 999999998754
No 183
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.37 E-value=4.1e-13 Score=115.66 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHhhc-----CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc
Q 023411 105 PDQAQLLAMLVQIL-----GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (282)
Q Consensus 105 ~~~~~ll~~l~~~~-----~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (282)
+....++..++... ++.+|||+|||+|..+..++...+ +++|+++|+++.+++.|+++++.+++.++++++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 124 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc
Confidence 44555555555432 467999999999999999998765 589999999999999999999999998889999999
Q ss_pred hhh-HHHHHHhCCCCCceeEEEEcCC
Q 023411 180 AAD-SLKALILNGEASSYDFAFVDAE 204 (282)
Q Consensus 180 ~~~-~l~~l~~~~~~~~fDlV~id~~ 204 (282)
+.+ ....+... ..++||+|+++.+
T Consensus 125 ~~~~~~~~~~~~-~~~~fD~i~~npp 149 (254)
T 2h00_A 125 QKTLLMDALKEE-SEIIYDFCMCNPP 149 (254)
T ss_dssp TTCSSTTTSTTC-CSCCBSEEEECCC
T ss_pred hhhhhhhhhhcc-cCCcccEEEECCC
Confidence 765 22112100 0158999999865
No 184
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.37 E-value=1.9e-12 Score=115.98 Aligned_cols=104 Identities=18% Similarity=0.124 Sum_probs=87.9
Q ss_pred CEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~ 200 (282)
.+|||||||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|..+. . .++||+|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~-----~~~~D~v~ 238 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---V-----PSNGDIYL 238 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C-----CSSCSEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C-----CCCCCEEE
Confidence 8999999999999999999986 689999999 999999999998888878899999998762 2 46799999
Q ss_pred EcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 201 VDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 201 id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
+....+++ ...++.+.+. |+|||.+++.+...+.
T Consensus 239 ~~~vl~~~~~~~~~~~l~~~~~~---L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 239 LSRIIGDLDEAASLRLLGNCREA---MAGDGRVVVIERTISA 277 (334)
T ss_dssp EESCGGGCCHHHHHHHHHHHHHH---SCTTCEEEEEECCBCS
T ss_pred EchhccCCCHHHHHHHHHHHHHh---cCCCCEEEEEEeccCC
Confidence 98775432 3567777777 9999999988776554
No 185
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=1.3e-12 Score=114.15 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=82.7
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
..+...++.+|||||||+|.++..++. + +++|+++|+++.+++.++++. .+++++++|+.+.. .
T Consensus 51 ~~l~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~--~----- 114 (279)
T 3ccf_A 51 QLLNPQPGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFR--V----- 114 (279)
T ss_dssp HHHCCCTTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCC--C-----
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCC--c-----
Confidence 444556778999999999999999998 3 689999999999999998765 35899999987632 1
Q ss_pred CCceeEEEEcCCc---cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 193 ASSYDFAFVDAEK---RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 193 ~~~fDlV~id~~~---~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.++||+|++.... .+....++.+.++ |+|||.+++...
T Consensus 115 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~---LkpgG~l~~~~~ 155 (279)
T 3ccf_A 115 DKPLDAVFSNAMLHWVKEPEAAIASIHQA---LKSGGRFVAEFG 155 (279)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred CCCcCEEEEcchhhhCcCHHHHHHHHHHh---cCCCcEEEEEec
Confidence 4789999998764 3456678888888 999999998644
No 186
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.37 E-value=5.1e-13 Score=117.90 Aligned_cols=103 Identities=10% Similarity=0.117 Sum_probs=82.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCC--CcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS--HKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~--~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++...+.. .+++++++|+.+... .++|
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~f 151 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-------DKRF 151 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-------SCCE
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-------CCCc
Confidence 3459999999999999999986 468999999999999999999876542 569999999976421 4799
Q ss_pred eEEEEcCC------ccccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 197 DFAFVDAE------KRMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 197 DlV~id~~------~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|+|++... ......+++.+.++ |+|||+|++....
T Consensus 152 D~v~~~~~~~~~~~~~~~~~~l~~~~~~---L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 152 GTVVISSGSINELDEADRRGLYASVREH---LEPGGKFLLSLAM 192 (299)
T ss_dssp EEEEECHHHHTTSCHHHHHHHHHHHHHH---EEEEEEEEEEEEC
T ss_pred CEEEECCcccccCCHHHHHHHHHHHHHH---cCCCcEEEEEeec
Confidence 99986422 12346678888888 9999999997554
No 187
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.37 E-value=9.3e-13 Score=111.26 Aligned_cols=104 Identities=16% Similarity=0.248 Sum_probs=84.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCC----CcEEEEEcchhhHHHHHHhCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS----HKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~----~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
.++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++....++. .+++++++|+.+.. . ..
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~-----~~ 99 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-F-----HD 99 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-S-----CT
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-C-----CC
Confidence 46789999999999999999986 479999999999999999998877763 36899999987532 1 15
Q ss_pred CceeEEEEcCCcccc---H---HHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 194 SSYDFAFVDAEKRMY---Q---EYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 194 ~~fDlV~id~~~~~~---~---~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
++||+|++.....+. . .+++.+.++ |+|||++++.+.
T Consensus 100 ~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~---L~pgG~l~~~~~ 142 (235)
T 3sm3_A 100 SSFDFAVMQAFLTSVPDPKERSRIIKEVFRV---LKPGAYLYLVEF 142 (235)
T ss_dssp TCEEEEEEESCGGGCCCHHHHHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred CceeEEEEcchhhcCCCHHHHHHHHHHHHHH---cCCCeEEEEEEC
Confidence 789999998764332 2 678888888 999999998754
No 188
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.37 E-value=2.6e-12 Score=107.83 Aligned_cols=108 Identities=17% Similarity=0.187 Sum_probs=82.5
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC
Q 023411 111 LAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 190 (282)
Q Consensus 111 l~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~ 190 (282)
+.......++.+|||||||+|..+..+++. +.+|+++|+++.+++.++++ .+++++.++..+..... .
T Consensus 44 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~--~ 111 (227)
T 3e8s_A 44 ILLAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAK--V 111 (227)
T ss_dssp HHHHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTC--S
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccc--c
Confidence 333444556789999999999999999986 46999999999999998876 34788888886542110 0
Q ss_pred CCCCceeEEEEcCC--ccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 191 GEASSYDFAFVDAE--KRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 191 ~~~~~fDlV~id~~--~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
....+||+|++... ..+...+++.+.++ |+|||++++...
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~---L~pgG~l~~~~~ 153 (227)
T 3e8s_A 112 PVGKDYDLICANFALLHQDIIELLSAMRTL---LVPGGALVIQTL 153 (227)
T ss_dssp CCCCCEEEEEEESCCCSSCCHHHHHHHHHT---EEEEEEEEEEEC
T ss_pred ccCCCccEEEECchhhhhhHHHHHHHHHHH---hCCCeEEEEEec
Confidence 11356999998765 44566788888888 999999999765
No 189
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.36 E-value=2.5e-12 Score=116.43 Aligned_cols=106 Identities=20% Similarity=0.223 Sum_probs=87.8
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++.+|||||||+|..+..+++..+ +.+++++|+ +.+++.+++++...++.++++++.+|+.+.+ ...
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~ 249 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL--------PRK 249 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------SSC
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC--------CCC
Confidence 345678999999999999999999886 689999999 9999999999999998888999999987532 245
Q ss_pred eeEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 196 YDFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 196 fDlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
||+|++....+++ ...++.+.+. |+|||.+++.+..
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~---L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEA---LEPGGRILIHERD 290 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHT---EEEEEEEEEEECC
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHh---cCCCcEEEEEEEe
Confidence 9999997765432 3466777776 9999998887665
No 190
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.36 E-value=2e-12 Score=117.54 Aligned_cols=104 Identities=19% Similarity=0.202 Sum_probs=87.4
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++..+ +.+++++|+ +.+++.+++++...++.++++++.+|+.+.+ ...|
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~ 249 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL--------PVTA 249 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------SCCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC--------CCCC
Confidence 45678999999999999999999986 689999999 9999999999999998888999999987522 2459
Q ss_pred eEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 197 DFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 197 DlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|+|++....+++ ...++.+.+. |+|||.+++.+.
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~---L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRA---LEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHh---cCCCcEEEEEec
Confidence 999998765432 3567777777 999998887666
No 191
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.36 E-value=5.3e-13 Score=113.47 Aligned_cols=103 Identities=12% Similarity=0.040 Sum_probs=78.1
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecC-ccHHHHH---HHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERD-ARSLEVA---KKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s-~~~~~~a---~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
.++.+|||||||+|..+..+++..+ +.+|+|+|+| +.+++.| +++....++. +++++++|+.+..... .
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~-----~ 95 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFEL-----K 95 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGG-----T
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhc-----c
Confidence 4667999999999999999997654 7899999999 6666665 7777777776 4999999997652111 3
Q ss_pred CceeEEEEcCCcc--------ccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 194 SSYDFAFVDAEKR--------MYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 194 ~~fDlV~id~~~~--------~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+.+|.|++..... .....+..+.++ |||||.+++
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~---LkpGG~l~i 137 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADL---AKKEAHFEF 137 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTT---EEEEEEEEE
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHh---cCCCcEEEE
Confidence 6788887754321 234567777777 999999998
No 192
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.36 E-value=3.3e-12 Score=114.92 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=86.1
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|.+++. ++ + ..+|+++|+++.+++.++++++.+++.++++++++|+.+.+ ++||
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---------~~fD 260 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---------VKGN 260 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------CCEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------CCCc
Confidence 4788999999999999999 76 2 57999999999999999999999999778999999998652 6899
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
+|++|.+.. ...+++.+.++ |+|||++++.....
T Consensus 261 ~Vi~dpP~~-~~~~l~~~~~~---L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 261 RVIMNLPKF-AHKFIDKALDI---VEEGGVIHYYTIGK 294 (336)
T ss_dssp EEEECCTTT-GGGGHHHHHHH---EEEEEEEEEEEEES
T ss_pred EEEECCcHh-HHHHHHHHHHH---cCCCCEEEEEEeec
Confidence 999986533 33678888888 99999998865543
No 193
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.35 E-value=2.2e-12 Score=103.93 Aligned_cols=102 Identities=12% Similarity=0.058 Sum_probs=81.3
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
....++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++ ..+++++.+| ... ..+
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~~~--------~~~ 74 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP-KEI--------PDN 74 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG-GGS--------CTT
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-CCC--------CCC
Confidence 345677799999999999999999864 4999999999999999887 2369999988 211 157
Q ss_pred ceeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 195 SYDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 195 ~fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
+||+|++..... +...+++.+.++ |+|||.+++.+.....
T Consensus 75 ~~D~v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 75 SVDFILFANSFHDMDDKQHVISEVKRI---LKDDGRVIIIDWRKEN 117 (170)
T ss_dssp CEEEEEEESCSTTCSCHHHHHHHHHHH---EEEEEEEEEEEECSSC
T ss_pred ceEEEEEccchhcccCHHHHHHHHHHh---cCCCCEEEEEEcCccc
Confidence 999999887644 456678888888 9999999998765443
No 194
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.35 E-value=6.5e-12 Score=101.85 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=78.9
Q ss_pred cCHHHHHHHHHHHhh--cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch
Q 023411 103 VSPDQAQLLAMLVQI--LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~--~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (282)
..++...++.. +.. .++.+|||+|||+|..+..+++.. +|+++|+++.+++. .++++++++|+
T Consensus 6 P~~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----------~~~~~~~~~d~ 70 (170)
T 3q87_B 6 PGEDTYTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----------HRGGNLVRADL 70 (170)
T ss_dssp CCHHHHHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----------CSSSCEEECST
T ss_pred cCccHHHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----------ccCCeEEECCh
Confidence 34555555555 444 577899999999999999998753 99999999999876 34689999999
Q ss_pred hhHHHHHHhCCCCCceeEEEEcCCcc------------ccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 181 ADSLKALILNGEASSYDFAFVDAEKR------------MYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 181 ~~~l~~l~~~~~~~~fDlV~id~~~~------------~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+..+ .++||+|+++.+.. .....+..+.+. + |||.+++-.
T Consensus 71 ~~~~~-------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l-pgG~l~~~~ 123 (170)
T 3q87_B 71 LCSIN-------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDA---V-TVGMLYLLV 123 (170)
T ss_dssp TTTBC-------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHH---C-CSSEEEEEE
T ss_pred hhhcc-------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhh---C-CCCEEEEEE
Confidence 76322 37999999986633 234567777777 8 999998854
No 195
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.35 E-value=2.6e-12 Score=109.31 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=78.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||+|||+|..+..+++. .+++++|+++.+++.++++....+ .+++++++|+.+.. . .++||+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~-----~~~fD~ 99 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE--L-----PEPVDA 99 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC--C-----SSCEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC--C-----CCCcCE
Confidence 4579999999999999988875 699999999999999999998766 35899999987642 1 478999
Q ss_pred EEEcC-Cc------cccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 199 AFVDA-EK------RMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 199 V~id~-~~------~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|++.. .. ......++.+.++ |+|||+++++
T Consensus 100 v~~~~~~~~~~~~~~~~~~~l~~~~~~---L~pgG~l~~~ 136 (243)
T 3d2l_A 100 ITILCDSLNYLQTEADVKQTFDSAARL---LTDGGKLLFD 136 (243)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred EEEeCCchhhcCCHHHHHHHHHHHHHh---cCCCeEEEEE
Confidence 99865 32 2344567777777 9999999984
No 196
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.35 E-value=2.6e-12 Score=113.07 Aligned_cols=109 Identities=15% Similarity=0.216 Sum_probs=74.9
Q ss_pred cCCCEEEEEcccccHHHHHHHH----HCCCCCEE--EEEecCccHHHHHHHHHHHh-CCCCcEE--EEEcchhhHHHHHH
Q 023411 118 LGAQRCIEVGVYTGYSSLAIAL----VLPESGCL--VACERDARSLEVAKKYYERA-GVSHKVK--IKHGLAADSLKALI 188 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~----~~~~~~~v--~~iD~s~~~~~~a~~~~~~~-g~~~~v~--~~~gd~~~~l~~l~ 188 (282)
.++.+|||||||+|..+..++. ..+ +.++ +++|+|++|++.|++.+... ++. +++ +..+++.+......
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEEEecchhhhhhhhc
Confidence 3456999999999987765443 333 4644 99999999999999988754 333 344 45666654332111
Q ss_pred hCCCCCceeEEEEcCCccc---cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 189 LNGEASSYDFAFVDAEKRM---YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~~---~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
....+++||+|++....++ ....+..+.++ |||||.+++-
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~---LkpgG~l~i~ 171 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSL---LGTNAKMLII 171 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHT---EEEEEEEEEE
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHH---cCCCcEEEEE
Confidence 0011578999999877444 45567777777 9999999885
No 197
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.34 E-value=1.1e-12 Score=111.13 Aligned_cols=93 Identities=12% Similarity=0.070 Sum_probs=75.3
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..+..+++. +.+|+++|+++.+++.++++ ..+++++++|+.+.++.. ..++||
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~----~~~~fD 113 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAG----LGAPFG 113 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTT----CCCCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCc----CCCCEE
Confidence 56789999999999999999986 47999999999999999887 235899999986433210 037899
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEE
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIV 229 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv 229 (282)
+|++... ....++.+.++ |||||.++
T Consensus 114 ~v~~~~~---~~~~l~~~~~~---LkpgG~l~ 139 (226)
T 3m33_A 114 LIVSRRG---PTSVILRLPEL---AAPDAHFL 139 (226)
T ss_dssp EEEEESC---CSGGGGGHHHH---EEEEEEEE
T ss_pred EEEeCCC---HHHHHHHHHHH---cCCCcEEE
Confidence 9999743 34557788888 99999999
No 198
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.34 E-value=2e-12 Score=109.99 Aligned_cols=108 Identities=15% Similarity=0.188 Sum_probs=84.2
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHh
Q 023411 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (282)
Q Consensus 110 ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~ 189 (282)
.+..++...++.+|||||||+|..+..+++. + ..+|+++|+++.+++.++++... .+++++++|+.+.. .
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~-- 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--L-- 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--C--
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--C--
Confidence 3445555557789999999999999999986 2 23999999999999999887642 36999999987632 1
Q ss_pred CCCCCceeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 190 NGEASSYDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
..++||+|++....+ +....++.+.++ |+|||.+++..
T Consensus 104 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 --PQDSFDLAYSSLALHYVEDVARLFRTVHQA---LSPGGHFVFST 144 (243)
T ss_dssp --CTTCEEEEEEESCGGGCSCHHHHHHHHHHH---EEEEEEEEEEE
T ss_pred --CCCCceEEEEeccccccchHHHHHHHHHHh---cCcCcEEEEEe
Confidence 147899999987643 346678888888 99999999864
No 199
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=6.7e-12 Score=107.18 Aligned_cols=107 Identities=10% Similarity=0.043 Sum_probs=81.3
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++..+ +|+++|+++.+++.++++.. ..+++++++|+.+......-. ....|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~-~~~~~ 125 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIH-SEIGD 125 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHH-HHHCS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccc-cccCc
Confidence 35667999999999999999999754 89999999999999998762 236999999997743221000 01359
Q ss_pred eEEEEcCCcc-----ccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 197 DFAFVDAEKR-----MYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 197 DlV~id~~~~-----~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|+|++....+ ....+++.+.++ |+|||++++-+..
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRIL---LGKQGAMYLIELG 165 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHH---HTTTCEEEEEEEC
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHH---cCCCCEEEEEeCC
Confidence 9999876533 345788888888 9999987776554
No 200
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.34 E-value=1.9e-12 Score=116.83 Aligned_cols=107 Identities=18% Similarity=0.206 Sum_probs=83.9
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC
Q 023411 111 LAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 190 (282)
Q Consensus 111 l~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~ 190 (282)
+.......++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++..+++. ++++.+|..+..
T Consensus 188 ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~------ 258 (343)
T 2pjd_A 188 LLSTLTPHTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV------ 258 (343)
T ss_dssp HHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC------
T ss_pred HHHhcCcCCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc------
Confidence 33333334567999999999999999999875 579999999999999999999988875 577888886532
Q ss_pred CCCCceeEEEEcCCccc--------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 191 GEASSYDFAFVDAEKRM--------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~--------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.++||+|+++...+. ...+++.+.++ |+|||.+++-
T Consensus 259 --~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~---LkpgG~l~i~ 302 (343)
T 2pjd_A 259 --KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRH---LNSGGELRIV 302 (343)
T ss_dssp --CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGG---EEEEEEEEEE
T ss_pred --cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHh---CCCCcEEEEE
Confidence 478999999876432 24456666666 9999998874
No 201
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.34 E-value=9.7e-13 Score=110.56 Aligned_cols=104 Identities=16% Similarity=0.130 Sum_probs=76.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHH----HHHhCCCCcEEEEEcchhhHHHHHHhCC
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKY----YERAGVSHKVKIKHGLAADSLKALILNG 191 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~----~~~~g~~~~v~~~~gd~~~~l~~l~~~~ 191 (282)
...++.+|||||||+|..+..+++..| +++|+++|+++++++.+.+. ....++. +++++++|+.+. +..
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l-~~~---- 96 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERL-PPL---- 96 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTC-CSC----
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhC-CCC----
Confidence 345678999999999999999999876 78999999999988864333 3334544 599999999763 211
Q ss_pred CCCceeEEEEcCCc--------cccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 192 EASSYDFAFVDAEK--------RMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 192 ~~~~fDlV~id~~~--------~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+. |.|++.... .+...+++.+.++ |||||.+++.
T Consensus 97 -~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~ 139 (218)
T 3mq2_A 97 -SGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAV---CRPGASFLVA 139 (218)
T ss_dssp -CCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHT---EEEEEEEEEE
T ss_pred -CCC-CEEEEEccchhhhhhhhccHHHHHHHHHHH---cCCCcEEEEE
Confidence 344 777654321 1225678888888 9999999984
No 202
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.33 E-value=4.8e-12 Score=113.93 Aligned_cols=107 Identities=15% Similarity=0.216 Sum_probs=83.9
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC---CC----CcEEEEEcchhhHHHHHHhCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG---VS----HKVKIKHGLAADSLKALILNG 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g---~~----~~v~~~~gd~~~~l~~l~~~~ 191 (282)
.+++||+||||+|..+..++++.+ .+|++||+++.+++.|++++...+ ++ ++++++.+|+.+.+......
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc-
Confidence 578999999999999999998643 799999999999999999976321 22 27999999999988754211
Q ss_pred CCCceeEEEEcCCc-c--------ccHHHHHHH----HHhhcCCCCCcEEEEeC
Q 023411 192 EASSYDFAFVDAEK-R--------MYQEYFELL----LQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 192 ~~~~fDlV~id~~~-~--------~~~~~l~~~----~~~~~~LkpgG~lv~dd 232 (282)
.++||+||+|... + ....+++.+ .++ |+|||+++++.
T Consensus 265 -~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~---L~pgGilv~qs 314 (364)
T 2qfm_A 265 -GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKV---LKQDGKYFTQG 314 (364)
T ss_dssp -TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHT---EEEEEEEEEEE
T ss_pred -CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhh---CCCCcEEEEEc
Confidence 4789999999753 1 224566666 666 99999999874
No 203
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.33 E-value=5.6e-12 Score=109.68 Aligned_cols=165 Identities=12% Similarity=0.069 Sum_probs=103.6
Q ss_pred CCChhHHHHHHhccCChHHHHHHHHHHHc-cCCCCCccCHHHHHHHHHHHh----hcCCCEEEEEcccc--cHHHHHHHH
Q 023411 67 SVTPPLYDYILRNVREPEILRQLREETAG-MRGSQMQVSPDQAQLLAMLVQ----ILGAQRCIEVGVYT--GYSSLAIAL 139 (282)
Q Consensus 67 ~~~~~l~~y~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~----~~~~~~VLEIG~G~--G~~t~~la~ 139 (282)
+..-++++|+.......+.=++.-+...+ .|. ...+......++...++ .....+|||||||+ +..+..+++
T Consensus 22 p~~aR~yd~~LgGk~n~~~Dr~~~~~~~~~~P~-~~~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~ 100 (277)
T 3giw_A 22 AHSARIYDYIIGGKDYYPADKEAGDAMSREWPA-LPVHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQ 100 (277)
T ss_dssp CCHHHHHHHHTTCSCCCHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHH
T ss_pred CCcchhheeecCCccCCHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHH
Confidence 45568999999876655555444444432 221 11222233344444433 34567999999997 555666666
Q ss_pred HCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee-----EEEEcCCccc------c
Q 023411 140 VLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD-----FAFVDAEKRM------Y 208 (282)
Q Consensus 140 ~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD-----lV~id~~~~~------~ 208 (282)
...++++|+++|.|+.|++.|++.+...+ ..+++++++|+.+....+......+.|| .|++....+. .
T Consensus 101 ~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p 179 (277)
T 3giw_A 101 SVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDA 179 (277)
T ss_dssp HHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCH
T ss_pred HHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhH
Confidence 54348999999999999999999886443 2469999999987532110000013454 4666655332 2
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeCCCCC
Q 023411 209 QEYFELLLQLLLQIRVGGIIVIDNVLWH 236 (282)
Q Consensus 209 ~~~l~~~~~~~~~LkpgG~lv~dd~~~~ 236 (282)
...+..+.+. |+|||+|++.....+
T Consensus 180 ~~~l~~l~~~---L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 180 VGIVRRLLEP---LPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHHHHHHTT---SCTTCEEEEEEECCT
T ss_pred HHHHHHHHHh---CCCCcEEEEEeccCC
Confidence 3456666666 999999999876543
No 204
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=1.3e-12 Score=113.01 Aligned_cols=110 Identities=19% Similarity=0.131 Sum_probs=83.5
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 023411 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (282)
Q Consensus 104 ~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (282)
.+.....+...+...++.+|||||||+|.++..+++ ++++|+++|+++.+++.++++. +++++++|+.+.
T Consensus 19 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~ 88 (261)
T 3ege_A 19 DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL 88 (261)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC
T ss_pred cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC
Confidence 334444455555556788999999999999999997 2689999999999887765543 599999999653
Q ss_pred HHHHHhCCCCCceeEEEEcCCc---cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 184 LKALILNGEASSYDFAFVDAEK---RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 184 l~~l~~~~~~~~fDlV~id~~~---~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+. ..++||+|++.... .+....++.+.++ || ||.+++.+.
T Consensus 89 -~~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~---Lk-gG~~~~~~~ 131 (261)
T 3ege_A 89 -AL-----PDKSVDGVISILAIHHFSHLEKSFQEMQRI---IR-DGTIVLLTF 131 (261)
T ss_dssp -CS-----CTTCBSEEEEESCGGGCSSHHHHHHHHHHH---BC-SSCEEEEEE
T ss_pred -CC-----CCCCEeEEEEcchHhhccCHHHHHHHHHHH---hC-CcEEEEEEc
Confidence 21 14799999998764 3456778888888 99 997766554
No 205
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.32 E-value=4.7e-12 Score=101.75 Aligned_cols=102 Identities=19% Similarity=0.215 Sum_probs=75.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HHHhCCCCC
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK--ALILNGEAS 194 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~--~l~~~~~~~ 194 (282)
..++.+|||+|||+|..+..+++.++++.+++++|+++ +++. .+++++++|+.+... .+......+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCC
Confidence 45678999999999999999999864468999999999 6532 469999999876420 110000147
Q ss_pred ceeEEEEcCCccc---c-----------HHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 195 SYDFAFVDAEKRM---Y-----------QEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 195 ~fDlV~id~~~~~---~-----------~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+||+|+++..... . ...++.+.++ |+|||.+++...
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---L~~gG~l~~~~~ 137 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDV---LAPGGSFVVKVF 137 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHH---cCCCcEEEEEEe
Confidence 8999999765321 1 4677788888 999999998543
No 206
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.32 E-value=1.5e-11 Score=113.93 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=91.1
Q ss_pred CCCCccCHHHHHHHHH-HHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEE
Q 023411 98 GSQMQVSPDQAQLLAM-LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK 176 (282)
Q Consensus 98 ~~~~~~~~~~~~ll~~-l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~ 176 (282)
.+..+.++...+.+.. +....++.+|||+|||+|.+++.+++. ..+|+++|+++++++.|+++++.+++. ++++
T Consensus 268 ~~F~q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~ 342 (425)
T 2jjq_A 268 NSFFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFE 342 (425)
T ss_dssp TSCCCSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEE
T ss_pred ccccccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEE
Confidence 3445555555444333 333567789999999999999999985 469999999999999999999999886 9999
Q ss_pred EcchhhHHHHHHhCCCCCceeEEEEcCCcccc-HHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 177 HGLAADSLKALILNGEASSYDFAFVDAEKRMY-QEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 177 ~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~-~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
++|+.+.+ ..+||+|++|.+.... ...++.+. . |+|||++++..
T Consensus 343 ~~d~~~~~--------~~~fD~Vv~dPPr~g~~~~~~~~l~-~---l~p~givyvsc 387 (425)
T 2jjq_A 343 VASDREVS--------VKGFDTVIVDPPRAGLHPRLVKRLN-R---EKPGVIVYVSC 387 (425)
T ss_dssp ECCTTTCC--------CTTCSEEEECCCTTCSCHHHHHHHH-H---HCCSEEEEEES
T ss_pred ECChHHcC--------ccCCCEEEEcCCccchHHHHHHHHH-h---cCCCcEEEEEC
Confidence 99998753 2389999999885443 34566665 3 79999999863
No 207
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.31 E-value=1.1e-11 Score=112.97 Aligned_cols=117 Identities=23% Similarity=0.249 Sum_probs=92.7
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+.+..+..+..++ ..++.+|||+|||+|.+++.++...+ .++|+|+|+++.+++.|++++..+|+.++++++++|+.
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~ 278 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDAT 278 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGG
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 45666777777777 77888999999999999999998754 46899999999999999999999999778999999998
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCcc-------c----cHHHHHHHHHhhcCCCCCcEEEE
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKR-------M----YQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~-------~----~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+.... .++||+|+++.+.. . +..+++.+.++ | +|+.+++
T Consensus 279 ~~~~~------~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~---l-~g~~~~i 328 (373)
T 3tm4_A 279 QLSQY------VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKV---L-EKRGVFI 328 (373)
T ss_dssp GGGGT------CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHH---E-EEEEEEE
T ss_pred hCCcc------cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHH---c-CCeEEEE
Confidence 75321 47899999987622 1 35566777777 8 4444444
No 208
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.31 E-value=4.9e-11 Score=99.16 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=84.2
Q ss_pred cCHHHHHHHHHHHh---hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc
Q 023411 103 VSPDQAQLLAMLVQ---ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (282)
Q Consensus 103 ~~~~~~~ll~~l~~---~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (282)
..+.....+...+. ..++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..++ +++++++|
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 105 (207)
T 1wy7_A 30 TPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGD 105 (207)
T ss_dssp CCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESC
T ss_pred CchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECc
Confidence 34444444444333 3467899999999999999999862 35899999999999999999998887 59999999
Q ss_pred hhhHHHHHHhCCCCCceeEEEEcCCc-----cccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 180 AADSLKALILNGEASSYDFAFVDAEK-----RMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 180 ~~~~l~~l~~~~~~~~fDlV~id~~~-----~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+.+. .++||+|+++.+. .....+++.+.++ + |+++++.
T Consensus 106 ~~~~---------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~---l--~~~~~~~ 148 (207)
T 1wy7_A 106 VSEF---------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEI---S--DVVYSIH 148 (207)
T ss_dssp GGGC---------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHH---C--SEEEEEE
T ss_pred hHHc---------CCCCCEEEEcCCCccccCCchHHHHHHHHHh---c--CcEEEEE
Confidence 9763 3589999999773 2345678888887 7 6655543
No 209
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.31 E-value=3.9e-12 Score=119.68 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=80.2
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++.+++.++++++++|+.+.. + .++|
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~-----~~~f 225 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L-----PEQV 225 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C-----SSCE
T ss_pred hcCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--c-----CCCe
Confidence 346789999999999999999874 3 46999999998 99999999999999888999999997631 1 3689
Q ss_pred eEEEEcCCc-----cccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 197 DFAFVDAEK-----RMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 197 DlV~id~~~-----~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|+|+++... +.....+..+.++ |+|||++++
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~---LkpgG~li~ 261 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKY---LKPSGNMFP 261 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGG---EEEEEEEES
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHh---cCCCCEEEE
Confidence 999997652 2223334444455 999999985
No 210
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.31 E-value=3.3e-12 Score=108.64 Aligned_cols=101 Identities=10% Similarity=0.100 Sum_probs=81.4
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..+..++.. +.+|+++|+++.+++.++++. ...+++++++|+.+.. . ..++||
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~--~----~~~~fD 118 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLP--F----ENEQFE 118 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCS--S----CTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCC--C----CCCCcc
Confidence 36779999999999999999986 479999999999999988764 2356999999987642 1 157999
Q ss_pred EEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 198 FAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 198 lV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
+|++....+ +....++.+.++ |+|||++++....
T Consensus 119 ~v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 119 AIMAINSLEWTEEPLRALNEIKRV---LKSDGYACIAILG 155 (242)
T ss_dssp EEEEESCTTSSSCHHHHHHHHHHH---EEEEEEEEEEEEC
T ss_pred EEEEcChHhhccCHHHHHHHHHHH---hCCCeEEEEEEcC
Confidence 999876643 445678888888 9999999997643
No 211
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.31 E-value=1.6e-11 Score=107.62 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=75.0
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEec-CccHHHHHHHHH-----HHhCCC----CcEEEEEcchhhHHHHH
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACER-DARSLEVAKKYY-----ERAGVS----HKVKIKHGLAADSLKAL 187 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~-s~~~~~~a~~~~-----~~~g~~----~~v~~~~gd~~~~l~~l 187 (282)
.++++|||+|||+|..++.+++. + ..+|+++|+ ++++++.+++++ +.+++. ++++++..+..+....+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 46779999999999999998875 2 359999999 899999999999 555554 46888865543321111
Q ss_pred HhCCCCCceeEEEE-cCC--ccccHHHHHHHHHhhcCCC---C--CcEEEE
Q 023411 188 ILNGEASSYDFAFV-DAE--KRMYQEYFELLLQLLLQIR---V--GGIIVI 230 (282)
Q Consensus 188 ~~~~~~~~fDlV~i-d~~--~~~~~~~l~~~~~~~~~Lk---p--gG~lv~ 230 (282)
......++||+|++ |.. ......+++.+.++ |+ | ||.+++
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~---Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSFHQAHDALLRSVKML---LALPANDPTAVALV 203 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHH---BCCTTTCTTCEEEE
T ss_pred HhhccCCCCCEEEEeCcccChHHHHHHHHHHHHH---hcccCCCCCCEEEE
Confidence 10000478999997 433 33466788888888 99 9 997655
No 212
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.31 E-value=4.7e-12 Score=109.87 Aligned_cols=106 Identities=14% Similarity=0.088 Sum_probs=74.5
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC
Q 023411 111 LAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 190 (282)
Q Consensus 111 l~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~ 190 (282)
+...+...++.+|||||||+|..+..+++. +++|+++|+|+.+++.+++++.... -...+...+.. .....
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~-~~~~~--- 107 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAE-IPKEL--- 107 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSC-CCGGG---
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccc-ccccc---
Confidence 333445567789999999999999999985 4799999999999999999876431 11222222210 00111
Q ss_pred CCCCceeEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 191 GEASSYDFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.++||+|+++...++ ....+..+.++ | |||.+++.
T Consensus 108 --~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~l---L-PGG~l~lS 147 (261)
T 3iv6_A 108 --AGHFDFVLNDRLINRFTTEEARRACLGMLSL---V-GSGTVRAS 147 (261)
T ss_dssp --TTCCSEEEEESCGGGSCHHHHHHHHHHHHHH---H-TTSEEEEE
T ss_pred --CCCccEEEEhhhhHhCCHHHHHHHHHHHHHh---C-cCcEEEEE
Confidence 478999999876443 34466677777 9 99999986
No 213
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.31 E-value=5.9e-12 Score=114.85 Aligned_cols=102 Identities=12% Similarity=0.080 Sum_probs=82.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH-HHhCCCCCcee
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA-LILNGEASSYD 197 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~-l~~~~~~~~fD 197 (282)
++++|||+| |+|.+++.++...+ .++|+++|+++.+++.|+++++.+|+. +++++++|+.+.++. . .++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~-----~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYA-----LHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTT-----SSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhc-----cCCcc
Confidence 578999999 99999999998754 579999999999999999999999987 799999999763321 1 36899
Q ss_pred EEEEcCCcc--ccHHHHHHHHHhhcCCCCCc-EEEEe
Q 023411 198 FAFVDAEKR--MYQEYFELLLQLLLQIRVGG-IIVID 231 (282)
Q Consensus 198 lV~id~~~~--~~~~~l~~~~~~~~~LkpgG-~lv~d 231 (282)
+|++|.+.. ....+++.+.+. |+||| ++++.
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~---LkpgG~~~~~~ 277 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIAT---LKGPRCAGYFG 277 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHT---BCSTTCEEEEE
T ss_pred EEEECCCCchHHHHHHHHHHHHH---cccCCeEEEEE
Confidence 999997632 235566777777 99999 44554
No 214
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.30 E-value=2e-11 Score=111.12 Aligned_cols=124 Identities=17% Similarity=0.062 Sum_probs=89.5
Q ss_pred CCCCccCHHHHHHHHH-HHhhc--CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEE
Q 023411 98 GSQMQVSPDQAQLLAM-LVQIL--GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVK 174 (282)
Q Consensus 98 ~~~~~~~~~~~~ll~~-l~~~~--~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~ 174 (282)
.+..++++.....+.. +.... .+.+|||+|||+|.+++.+++. ..+|+++|+++++++.|+++++.+++. +++
T Consensus 189 ~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~ 264 (369)
T 3bt7_A 189 NSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHID-NVQ 264 (369)
T ss_dssp TSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCC-SEE
T ss_pred CCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ceE
Confidence 3445556665444433 33322 3578999999999999999875 369999999999999999999999985 699
Q ss_pred EEEcchhhHHHHHHhCCC----------CCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 175 IKHGLAADSLKALILNGE----------ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 175 ~~~gd~~~~l~~l~~~~~----------~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
++++|+.+.++.+..... ..+||+|++|++.... ...+.+. |+++|.++.-
T Consensus 265 ~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~~---l~~~g~ivyv 325 (369)
T 3bt7_A 265 IIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL---DSETEKM---VQAYPRILYI 325 (369)
T ss_dssp EECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC---CHHHHHH---HTTSSEEEEE
T ss_pred EEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcccc---HHHHHHH---HhCCCEEEEE
Confidence 999999887765531100 0379999999875432 2345555 6778777663
No 215
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.30 E-value=8.2e-13 Score=113.85 Aligned_cols=110 Identities=14% Similarity=0.111 Sum_probs=79.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCC----------------------------
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV---------------------------- 169 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~---------------------------- 169 (282)
.++.+|||||||+|..+..++.... .+|+++|+++.+++.+++++...+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4567999999999999998887532 4899999999999999988764321
Q ss_pred CCcE-EEEEcchhhHHHHHHhCCCCCceeEEEEcCCcc----c---cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 170 SHKV-KIKHGLAADSLKALILNGEASSYDFAFVDAEKR----M---YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 170 ~~~v-~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~----~---~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
..++ +++++|+.+..+.. ....++||+|++....+ + ....++.+.++ |+|||++++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~--~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~---LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLG--GVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSL---LKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTTT--TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTT---EEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCCC--ccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhh---CCCCcEEEEEecC
Confidence 0127 89999987643211 00127899999977644 3 44455555555 9999999997754
No 216
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.30 E-value=7.4e-12 Score=106.15 Aligned_cols=99 Identities=14% Similarity=0.124 Sum_probs=77.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++. .+++++++|+.+... .++||
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-------~~~~D 102 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-------GRKFS 102 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-------SSCEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-------CCCCc
Confidence 467899999999999999999874 38999999999999998864 248999999875321 47899
Q ss_pred EEEEcC-Cc------cccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 198 FAFVDA-EK------RMYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 198 lV~id~-~~------~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
+|++.. .. ......++.+.++ |+|||.++++....
T Consensus 103 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~---L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 103 AVVSMFSSVGYLKTTEELGAAVASFAEH---LEPGGVVVVEPWWF 144 (239)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHT---EEEEEEEEECCCCC
T ss_pred EEEEcCchHhhcCCHHHHHHHHHHHHHh---cCCCeEEEEEeccC
Confidence 999643 32 2234566667676 99999999986544
No 217
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.30 E-value=1.2e-11 Score=109.92 Aligned_cols=108 Identities=11% Similarity=0.067 Sum_probs=80.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC------CCCcEEEEEcchhhHHH--HHHhC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG------VSHKVKIKHGLAADSLK--ALILN 190 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g------~~~~v~~~~gd~~~~l~--~l~~~ 190 (282)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.++++....+ ...+++++++|+.+... .+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-- 109 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR-- 109 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS--
T ss_pred CCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc--
Confidence 6679999999999999999874 2 5799999999999999999987653 23469999999876420 010
Q ss_pred CCCCceeEEEEcCCccc-------cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 191 GEASSYDFAFVDAEKRM-------YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~-------~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
...++||+|++....+. ....++.+.++ |+|||++++...
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~---LkpgG~li~~~~ 156 (313)
T 3bgv_A 110 DPQMCFDICSCQFVCHYSFESYEQADMMLRNACER---LSPGGYFIGTTP 156 (313)
T ss_dssp STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTT---EEEEEEEEEEEE
T ss_pred cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHH---hCCCcEEEEecC
Confidence 00358999999866432 23556666666 999999998644
No 218
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.29 E-value=1.2e-11 Score=101.08 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=81.5
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH
Q 023411 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (282)
Q Consensus 108 ~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l 187 (282)
..++..+ ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++. +++++++|+.+.. .
T Consensus 37 ~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~ 103 (195)
T 3cgg_A 37 ARLIDAM--APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQ--I 103 (195)
T ss_dssp HHHHHHH--SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSC--C
T ss_pred HHHHHHh--ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCC--C
Confidence 3444444 346789999999999999999986 4799999999999999988752 4899999987531 1
Q ss_pred HhCCCCCceeEEEEc-CCccc-----cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 188 ILNGEASSYDFAFVD-AEKRM-----YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 188 ~~~~~~~~fDlV~id-~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
..++||+|++. ...++ ...+++.+.++ |+|||.+++...
T Consensus 104 ----~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~---l~~~G~l~~~~~ 148 (195)
T 3cgg_A 104 ----SETDFDLIVSAGNVMGFLAEDGREPALANIHRA---LGADGRAVIGFG 148 (195)
T ss_dssp ----CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred ----CCCceeEEEECCcHHhhcChHHHHHHHHHHHHH---hCCCCEEEEEeC
Confidence 14789999997 33322 35677788888 999999998643
No 219
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.28 E-value=3.7e-12 Score=106.25 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=76.0
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|..+..+ + ..+++++|+++.+++.++++. .+++++++|+.+. + . ..++||+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~----~~~~fD~ 98 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEAL-P-F----PGESFDV 98 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSC-C-S----CSSCEEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccC-C-C----CCCcEEE
Confidence 6679999999999988776 2 239999999999999998876 3589999998653 1 1 1478999
Q ss_pred EEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 199 AFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 199 V~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|++....+ +....++.+.++ |+|||.+++....
T Consensus 99 v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 99 VLLFTTLEFVEDVERVLLEARRV---LRPGGALVVGVLE 134 (211)
T ss_dssp EEEESCTTTCSCHHHHHHHHHHH---EEEEEEEEEEEEC
T ss_pred EEEcChhhhcCCHHHHHHHHHHH---cCCCCEEEEEecC
Confidence 99987643 356677888888 9999999997554
No 220
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.27 E-value=4.7e-11 Score=106.11 Aligned_cols=99 Identities=19% Similarity=0.199 Sum_probs=79.1
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+......++..++...++.+|||+|||+|+.+..++..++..++|+++|+++.+++.++++++..|+. +++++++|+.
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~ 163 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFL 163 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGG
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChH
Confidence 344444556666777778899999999999999999998765689999999999999999999999986 4999999987
Q ss_pred hHHHHHHhCCCCCceeEEEEcCC
Q 023411 182 DSLKALILNGEASSYDFAFVDAE 204 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~ 204 (282)
+..+... ..++||.|++|++
T Consensus 164 ~~~~~~~---~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 164 AVSPSDP---RYHEVHYILLDPS 183 (309)
T ss_dssp GSCTTCG---GGTTEEEEEECCC
T ss_pred hcCcccc---ccCCCCEEEEcCC
Confidence 6432110 0157999999865
No 221
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.27 E-value=1.2e-12 Score=113.58 Aligned_cols=113 Identities=15% Similarity=0.068 Sum_probs=75.0
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCC----------------------------
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV---------------------------- 169 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~---------------------------- 169 (282)
.++.+|||||||+|..+..++... ..+|+|+|+|+.+++.|+++++....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 356799999999998777655431 13799999999999999988754310
Q ss_pred CCcEE-EEEcchhhHHHHHHhCCCCCceeEEEEcCCccc----cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 170 SHKVK-IKHGLAADSLKALILNGEASSYDFAFVDAEKRM----YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 170 ~~~v~-~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~----~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
..+++ ++++|..+..+.. ....++||+|++....++ ..++...+.+++++|||||.+++.+..
T Consensus 132 ~~~i~~~~~~D~~~~~~~~--~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLA--PAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHEEEEEECCTTSSSTTT--TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HhhhheEEeccccCCCCCC--ccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 11243 8888887632110 001468999998755332 233334444444449999999998654
No 222
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.25 E-value=8.8e-12 Score=109.36 Aligned_cols=111 Identities=11% Similarity=0.041 Sum_probs=72.9
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh-----------------CCC-----------
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-----------------GVS----------- 170 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-----------------g~~----------- 170 (282)
++.+|||||||+|..+..++.. + ..+|+++|+|+.+++.|+++++.. +..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 6789999999999955444432 2 469999999999999998865421 110
Q ss_pred -CcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc-------cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 171 -HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-------YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 171 -~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~-------~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
..++++.+|+.+.++.-......++||+|++....+. ....++.+.++ |||||++++.+.+
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~---LkpGG~l~~~~~~ 217 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTL---LRPGGHLLLIGAL 217 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTT---EEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHh---cCCCCEEEEEEec
Confidence 0156777787652221000011367999999876443 34455555555 9999999997543
No 223
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.25 E-value=4.4e-12 Score=105.60 Aligned_cols=102 Identities=9% Similarity=0.091 Sum_probs=79.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++..+ .+++++|+++.+++.++++... ..+++++++|+.+. + + ..++||
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~-~-~----~~~~fD 109 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL-D-F----PSASFD 109 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC-C-S----CSSCEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC-C-C----CCCccc
Confidence 4677999999999999999998643 3899999999999999988763 24699999998764 1 1 147899
Q ss_pred EEEEcCCc------------------cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 198 FAFVDAEK------------------RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 198 lV~id~~~------------------~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+|++.... ......++.+.++ |+|||.+++...
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~li~~~~ 160 (215)
T 2pxx_A 110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRV---LVPGGRFISMTS 160 (215)
T ss_dssp EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHH---EEEEEEEEEEES
T ss_pred EEEECcchhhhccccccccccccchhHHHHHHHHHHHHh---CcCCCEEEEEeC
Confidence 99986442 1235677777787 999999998653
No 224
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.24 E-value=5e-11 Score=110.79 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=84.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|.+++.+++. ..+|+++|+++++++.|+++++.+++. +++++++|+.+.++.+.. ..++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~~~~~--~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVTKQPW--AKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCSSSGG--GTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhhhhhh--hcCCCC
Confidence 46689999999999999999986 479999999999999999999999887 699999999874332100 036899
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|++|.+.......++.+.+ ++|++++.+.
T Consensus 359 ~Vv~dPPr~g~~~~~~~l~~----~~p~~ivyvs 388 (433)
T 1uwv_A 359 KVLLDPARAGAAGVMQQIIK----LEPIRIVYVS 388 (433)
T ss_dssp EEEECCCTTCCHHHHHHHHH----HCCSEEEEEE
T ss_pred EEEECCCCccHHHHHHHHHh----cCCCeEEEEE
Confidence 99999886655666666665 5899988875
No 225
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.24 E-value=5.7e-11 Score=102.36 Aligned_cols=149 Identities=13% Similarity=0.157 Sum_probs=104.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHH---C---CCCCEEEEEe-----cCcc-------------------HHHHHHHHH---
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALV---L---PESGCLVACE-----RDAR-------------------SLEVAKKYY--- 164 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~---~---~~~~~v~~iD-----~s~~-------------------~~~~a~~~~--- 164 (282)
.-+..|+|+||..|.++..++.. + ....+|+++| ..+. ..+..++.+
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 45679999999999999987753 1 2357899999 2211 111122222
Q ss_pred ---HHhCC-CCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCc-cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcc
Q 023411 165 ---ERAGV-SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHGKV 239 (282)
Q Consensus 165 ---~~~g~-~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~-~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~ 239 (282)
+..+. .++++++.|++.+.++.+..+....+||+|++|+.. ..+..+++.+.+. |+|||+|++||+.+++-
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~---l~~GGvIv~DD~~~~~w- 223 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPY---LTKGSIVAFDELDNPKW- 223 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGG---EEEEEEEEESSTTCTTC-
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHH---hCCCcEEEEcCCCCCCC-
Confidence 23454 478999999999999887554434689999999985 4566678888888 99999999999853221
Q ss_pred cCCcCCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEE
Q 023411 240 ADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQ 280 (282)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~Gl~~~~ 280 (282)
. ..+.|+++| ..+.++....+|++.+...++
T Consensus 224 -----~-G~~~A~~ef----~~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 224 -----P-GENIAMRKV----LGLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp -----T-HHHHHHHHH----TCTTSSCCEECTTCSCCEEEE
T ss_pred -----h-HHHHHHHHH----HhhCCCeEEEccCCCCCEEEE
Confidence 1 123444444 456688899999998877654
No 226
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.23 E-value=8.1e-11 Score=97.45 Aligned_cols=92 Identities=16% Similarity=0.209 Sum_probs=72.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++++. +++++++|+.+. .++||
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~---------~~~~D 112 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEI---------SGKYD 112 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGC---------CCCEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHC---------CCCee
Confidence 36789999999999999999986 3 3589999999999999998875 589999999763 36899
Q ss_pred EEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|+++.+... ...+++.+.+. + |+++++.
T Consensus 113 ~v~~~~p~~~~~~~~~~~~l~~~~~~---~--g~~~~~~ 146 (200)
T 1ne2_A 113 TWIMNPPFGSVVKHSDRAFIDKAFET---S--MWIYSIG 146 (200)
T ss_dssp EEEECCCC-------CHHHHHHHHHH---E--EEEEEEE
T ss_pred EEEECCCchhccCchhHHHHHHHHHh---c--CcEEEEE
Confidence 9999977322 34577777777 6 5655554
No 227
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.23 E-value=2e-11 Score=105.46 Aligned_cols=95 Identities=16% Similarity=0.180 Sum_probs=75.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.++++.. . .++++|+.+.. . ..++||+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~--~----~~~~fD~ 117 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLP--F----PSGAFEA 117 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCC--S----CTTCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCC--C----CCCCEEE
Confidence 6789999999999999999975 4799999999999999988753 1 27888886532 1 1478999
Q ss_pred EEEcCC----ccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 199 AFVDAE----KRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 199 V~id~~----~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
|++... ..+....++.+.++ |+|||.+++..
T Consensus 118 v~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~l~~~~ 152 (260)
T 2avn_A 118 VLALGDVLSYVENKDKAFSEIRRV---LVPDGLLIATV 152 (260)
T ss_dssp EEECSSHHHHCSCHHHHHHHHHHH---EEEEEEEEEEE
T ss_pred EEEcchhhhccccHHHHHHHHHHH---cCCCeEEEEEe
Confidence 998764 23456778888888 99999999854
No 228
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.23 E-value=5e-11 Score=104.77 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=77.8
Q ss_pred CccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch
Q 023411 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (282)
Q Consensus 101 ~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (282)
+..++.....+...+...++.+|||||||+|..+..+++. +++|+++|+++.+++.+++++...+..++++++++|+
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 3456666666666666677889999999999999999987 3699999999999999999987766656799999999
Q ss_pred hhHHHHHHhCCCCCceeEEEEcCCcccc
Q 023411 181 ADSLKALILNGEASSYDFAFVDAEKRMY 208 (282)
Q Consensus 181 ~~~l~~l~~~~~~~~fDlV~id~~~~~~ 208 (282)
.+.. ..+||+|+++.+..-.
T Consensus 87 ~~~~--------~~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 87 LKTD--------LPFFDTCVANLPYQIS 106 (285)
T ss_dssp TTSC--------CCCCSEEEEECCGGGH
T ss_pred eccc--------chhhcEEEEecCcccc
Confidence 7541 2579999998765433
No 229
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.23 E-value=4.7e-11 Score=98.71 Aligned_cols=99 Identities=14% Similarity=0.170 Sum_probs=70.4
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH------------
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL------------ 184 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l------------ 184 (282)
.++.+|||+|||+|.++..+++..++ +++|+++|+++.. .. .+++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 46679999999999999999998863 5899999999842 12 35899999986532
Q ss_pred -------HHHHhCCCCCceeEEEEcCCccc-------c-------HHHHHHHHHhhcCCCCCcEEEEe
Q 023411 185 -------KALILNGEASSYDFAFVDAEKRM-------Y-------QEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 185 -------~~l~~~~~~~~fDlV~id~~~~~-------~-------~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
..+......++||+|+++..... . ...++.+.++ |+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~---LkpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQY---INIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHH---ccCCCEEEEE
Confidence 00000001468999999865322 1 1245666677 9999999985
No 230
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.22 E-value=2.8e-11 Score=104.78 Aligned_cols=95 Identities=19% Similarity=0.206 Sum_probs=76.8
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.++++. .++.++.+|+.+. + . ..++||
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~----~~~~fD 150 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL-P-F----SDTSMD 150 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-S-B----CTTCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-C-C----CCCcee
Confidence 4678999999999999999999875 679999999999999988764 2478999998653 1 1 147899
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+|++..... .++.+.++ |+|||.+++..
T Consensus 151 ~v~~~~~~~----~l~~~~~~---L~pgG~l~~~~ 178 (269)
T 1p91_A 151 AIIRIYAPC----KAEELARV---VKPGGWVITAT 178 (269)
T ss_dssp EEEEESCCC----CHHHHHHH---EEEEEEEEEEE
T ss_pred EEEEeCChh----hHHHHHHh---cCCCcEEEEEE
Confidence 999865533 36778888 99999998854
No 231
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.22 E-value=1.1e-11 Score=111.79 Aligned_cols=106 Identities=12% Similarity=0.090 Sum_probs=80.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+..+|||||||+|..+..+++..| +.+++++|+ +.++. +++.+..++.++++++.+|+.+. + . +|
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~---~-----p-~~ 248 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE---V-----P-HA 248 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC---C-----C-CC
T ss_pred ccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC---C-----C-CC
Confidence 45678999999999999999999987 689999999 44444 44444456667899999998632 1 3 89
Q ss_pred eEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 197 DFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 197 DlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
|+|++....+++ ...++.+.+. |||||.|++.+...+..
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~---LkpgG~l~i~e~~~~~~ 292 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRV---MPAHGRVLVIDAVVPEG 292 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHT---CCTTCEEEEEECCBCSS
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHh---cCCCCEEEEEEeccCCC
Confidence 999997765443 3456666666 99999999887766554
No 232
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.20 E-value=8.4e-12 Score=115.16 Aligned_cols=102 Identities=14% Similarity=0.140 Sum_probs=74.4
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||||||+|.++..+++. +.+|+++|+++.+++.|+++ +......+...+..+.++.. .++|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~-----~~~f 172 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT-----EGPA 172 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH-----HCCE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC-----CCCE
Confidence 346779999999999999999975 46999999999999988875 34322222222222223322 4899
Q ss_pred eEEEEcCCccc---cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 197 DFAFVDAEKRM---YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 197 DlV~id~~~~~---~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
|+|++....++ ...+++.+.++ |||||++++...
T Consensus 173 D~I~~~~vl~h~~d~~~~l~~~~r~---LkpgG~l~i~~~ 209 (416)
T 4e2x_A 173 NVIYAANTLCHIPYVQSVLEGVDAL---LAPDGVFVFEDP 209 (416)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHH---EEEEEEEEEEEE
T ss_pred EEEEECChHHhcCCHHHHHHHHHHH---cCCCeEEEEEeC
Confidence 99999877544 45677777777 999999999743
No 233
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.19 E-value=7.9e-11 Score=97.45 Aligned_cols=95 Identities=15% Similarity=0.222 Sum_probs=68.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH--HHH---Hh-CC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KAL---IL-NG 191 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~l---~~-~~ 191 (282)
.++.+|||+|||+|.++..+++. +++|+|+|+++.. .. .+++++++|+.+.. ..+ .. .+
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhccc
Confidence 46789999999999999999986 5899999999852 12 35999999986531 111 10 00
Q ss_pred CCCceeEEEEcCCccc--------------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 192 EASSYDFAFVDAEKRM--------------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 192 ~~~~fDlV~id~~~~~--------------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.++||+|++|..+.. ....++.+.++ |||||.+++.
T Consensus 89 -~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~---LkpGG~lv~k 138 (191)
T 3dou_A 89 -IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRY---LRNGGNVLLK 138 (191)
T ss_dssp -CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred -CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHH---ccCCCEEEEE
Confidence 148999999865211 12345566677 9999999985
No 234
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.18 E-value=4.4e-11 Score=104.50 Aligned_cols=106 Identities=17% Similarity=0.216 Sum_probs=74.7
Q ss_pred CCCEEEEEcccccH----HHHHHHHHCCC---CCEEEEEecCccHHHHHHHHHH--------------H---------hC
Q 023411 119 GAQRCIEVGVYTGY----SSLAIALVLPE---SGCLVACERDARSLEVAKKYYE--------------R---------AG 168 (282)
Q Consensus 119 ~~~~VLEIG~G~G~----~t~~la~~~~~---~~~v~~iD~s~~~~~~a~~~~~--------------~---------~g 168 (282)
++.+|+|+|||+|. .+..+++.++. +.+|+|+|+|+++++.|+++.- . .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 55666666442 3589999999999999998641 0 00
Q ss_pred -------CCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 169 -------VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 169 -------~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+..+|+|.++|..+. + .. ..++||+|+|-+.... ....++.+.+. |+|||+|++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~-~-~~---~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~---L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK-Q-YN---VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPL---LKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS-S-CC---CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGG---EEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCC-C-CC---cCCCeeEEEECCchHhCCHHHHHHHHHHHHHH---hCCCcEEEEEe
Confidence 113699999998762 1 10 0368999999776432 23455556665 99999999943
No 235
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.18 E-value=1.2e-11 Score=103.89 Aligned_cols=98 Identities=15% Similarity=0.093 Sum_probs=74.6
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||+|||+|..+..+++. + .+++++|+++.+++.++++. .+++++|+.+..... .+++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~----~~~~fD 95 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY----EEEQFD 95 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS----CTTCEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC----CCCccC
Confidence 46789999999999999999986 3 79999999999998887643 267888886421111 147899
Q ss_pred EEEEcCCccc---cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 198 FAFVDAEKRM---YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 198 lV~id~~~~~---~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+|++....++ ....++.+.++ |+|||.+++...
T Consensus 96 ~v~~~~~l~~~~~~~~~l~~~~~~---L~~gG~l~~~~~ 131 (230)
T 3cc8_A 96 CVIFGDVLEHLFDPWAVIEKVKPY---IKQNGVILASIP 131 (230)
T ss_dssp EEEEESCGGGSSCHHHHHHHTGGG---EEEEEEEEEEEE
T ss_pred EEEECChhhhcCCHHHHHHHHHHH---cCCCCEEEEEeC
Confidence 9999876444 34556666666 999999998643
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.17 E-value=9.9e-11 Score=105.49 Aligned_cols=116 Identities=13% Similarity=0.081 Sum_probs=88.6
Q ss_pred cCHHHHHHHHHHHh----hcCCCEEEEEcccccHHHHHHHHHCCCC----CEEEEEecCccHHHHHHHHHHHhCCCCcEE
Q 023411 103 VSPDQAQLLAMLVQ----ILGAQRCIEVGVYTGYSSLAIALVLPES----GCLVACERDARSLEVAKKYYERAGVSHKVK 174 (282)
Q Consensus 103 ~~~~~~~ll~~l~~----~~~~~~VLEIG~G~G~~t~~la~~~~~~----~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~ 174 (282)
.......++..++. ..++.+|||+|||+|.++..+++.++.. .+++|+|+++.+++.|+.++...|+ +++
T Consensus 110 TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~ 187 (344)
T 2f8l_A 110 TPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMT 187 (344)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCE
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--Cce
Confidence 44455555555543 3356799999999999999999887532 7899999999999999999998887 489
Q ss_pred EEEcchhhHHHHHHhCCCCCceeEEEEcCCcccc---------------------HHHHHHHHHhhcCCCCCcEEEE
Q 023411 175 IKHGLAADSLKALILNGEASSYDFAFVDAEKRMY---------------------QEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 175 ~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~---------------------~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
++++|+.+..+ .++||+|+.+.+.... ..+++.+.+. |+|||++++
T Consensus 188 i~~~D~l~~~~-------~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~---Lk~gG~~~~ 254 (344)
T 2f8l_A 188 LLHQDGLANLL-------VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRY---TKPGGYLFF 254 (344)
T ss_dssp EEESCTTSCCC-------CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHT---EEEEEEEEE
T ss_pred EEECCCCCccc-------cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHH---hCCCCEEEE
Confidence 99999875321 4789999998772211 2467777777 999998877
No 237
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.17 E-value=7.4e-10 Score=100.15 Aligned_cols=107 Identities=11% Similarity=0.104 Sum_probs=83.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+..+|+|||||+|..+..+++..| +.+++..|. |++++.+++++...+ .++|+++.+|+.+.. ...+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~--------~~~~ 245 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDP--------LPEA 245 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSC--------CCCC
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCC--------CCCc
Confidence 45667999999999999999999998 789999997 889999998876544 578999999987531 3568
Q ss_pred eEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
|++++....+++ ...++.+.+. |+|||.+++-+.+.+.
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~a---l~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHT---CKPGGGILVIESLLDE 288 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHH---CCTTCEEEEEECCCCT
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhh---CCCCCEEEEEEeeeCC
Confidence 999987664443 3457777777 9999988877665543
No 238
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.16 E-value=4.7e-11 Score=100.38 Aligned_cols=98 Identities=23% Similarity=0.353 Sum_probs=76.4
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
.+....++.+|||||||+|..+..++.. +++|+++.+++.++++ +++++++|+.+. + . .
T Consensus 41 ~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~----~ 99 (219)
T 1vlm_A 41 AVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L----K 99 (219)
T ss_dssp HHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S----C
T ss_pred HHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C----C
Confidence 3444455889999999999999887642 9999999999998876 478999988653 2 1 1
Q ss_pred CCceeEEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 193 ASSYDFAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 193 ~~~fDlV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
.++||+|++..... +...+++.+.++ |+|||.+++....
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~---L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 100 DESFDFALMVTTICFVDDPERALKEAYRI---LKKGGYLIVGIVD 141 (219)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHHHHH---EEEEEEEEEEEEC
T ss_pred CCCeeEEEEcchHhhccCHHHHHHHHHHH---cCCCcEEEEEEeC
Confidence 46899999987643 356678888888 9999999997553
No 239
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.16 E-value=6.6e-11 Score=102.43 Aligned_cols=108 Identities=18% Similarity=0.140 Sum_probs=78.9
Q ss_pred CCCEEEEEcccccHHHHHHHHH-------CCC----CCEEEEEecCc--------------cHHHHHHHHHHHhC-----
Q 023411 119 GAQRCIEVGVYTGYSSLAIALV-------LPE----SGCLVACERDA--------------RSLEVAKKYYERAG----- 168 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~-------~~~----~~~v~~iD~s~--------------~~~~~a~~~~~~~g----- 168 (282)
++.+|||||+|+|++++.+++. .|. ..+++++|..| +..+.+++.++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999999998775 342 24899999987 44446777766421
Q ss_pred -----C---CCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCcc--c----cHHHHHHHHHhhcCCCCCcEEEE
Q 023411 169 -----V---SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR--M----YQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 169 -----~---~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~--~----~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+ ..+++++.||+.+.++.+.... ...||+||+|+... + ..++++.+.++ |+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~-~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~---L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSL-NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARL---ARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGG-TTCEEEEEECSSCTTTCGGGCCHHHHHHHHHH---EEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhccccc-CCeEEEEEECCCCcccChhhcCHHHHHHHHHH---cCCCcEEEE
Confidence 1 1357899999998776652100 13799999997521 2 56789999999 999999986
No 240
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.16 E-value=3.7e-11 Score=104.13 Aligned_cols=90 Identities=19% Similarity=0.236 Sum_probs=73.2
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCc-------cHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDA-------RSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 110 ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~-------~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
++...+...++.+|||+|||+|..++.++.. +++|+++|+++ ++++.|+++.+.+++.++++++++|+.+
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE 150 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH
Confidence 3444444556679999999999999999985 47899999999 9999999999888877789999999988
Q ss_pred HHHHHHhCCCCCceeEEEEcCC
Q 023411 183 SLKALILNGEASSYDFAFVDAE 204 (282)
Q Consensus 183 ~l~~l~~~~~~~~fDlV~id~~ 204 (282)
.++.+... .++||+|++|..
T Consensus 151 ~l~~~~~~--~~~fD~V~~dP~ 170 (258)
T 2r6z_A 151 QMPALVKT--QGKPDIVYLDPM 170 (258)
T ss_dssp HHHHHHHH--HCCCSEEEECCC
T ss_pred HHHhhhcc--CCCccEEEECCC
Confidence 76655210 168999999975
No 241
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.16 E-value=1.2e-10 Score=103.10 Aligned_cols=95 Identities=15% Similarity=0.253 Sum_probs=73.1
Q ss_pred CccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch
Q 023411 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (282)
Q Consensus 101 ~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (282)
+..++.....+...+...++.+|||||||+|..+..+++. +++|+++|+++.+++.+++++...+. ++++++++|+
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~ 99 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDA 99 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----C
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECch
Confidence 3456666666666666667889999999999999999875 47999999999999999999987776 4699999998
Q ss_pred hhHHHHHHhCCCCCceeEEEEcCCccc
Q 023411 181 ADSLKALILNGEASSYDFAFVDAEKRM 207 (282)
Q Consensus 181 ~~~l~~l~~~~~~~~fDlV~id~~~~~ 207 (282)
.+.. ..+||+|+++.+..-
T Consensus 100 ~~~~--------~~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 100 IKTV--------FPKFDVCTANIPYKI 118 (299)
T ss_dssp CSSC--------CCCCSEEEEECCGGG
T ss_pred hhCC--------cccCCEEEEcCCccc
Confidence 7541 358999999877543
No 242
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.15 E-value=1.9e-10 Score=94.57 Aligned_cols=100 Identities=10% Similarity=0.092 Sum_probs=71.0
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCC--------CEEEEEecCccHHHHHHHHHHHhCCCCcEEEE-EcchhhHHH--H
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPES--------GCLVACERDARSLEVAKKYYERAGVSHKVKIK-HGLAADSLK--A 186 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~--------~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~-~gd~~~~l~--~ 186 (282)
.++.+|||+|||+|.++..+++.++.. ++|+++|+++.. .. .+++++ ++|..+... .
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHH
Confidence 467899999999999999999987633 899999999852 12 358889 888765321 1
Q ss_pred HHhCCCCCceeEEEEcCCccc-------c-------HHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 187 LILNGEASSYDFAFVDAEKRM-------Y-------QEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 187 l~~~~~~~~fDlV~id~~~~~-------~-------~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+......++||+|+++..... . ...++.+.++ |+|||.+++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDI---LQPGGTFLCKT 145 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH---EEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHH---hcCCCEEEEEe
Confidence 100011358999999763221 1 2556777777 99999999864
No 243
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.14 E-value=1.8e-11 Score=107.64 Aligned_cols=97 Identities=14% Similarity=0.082 Sum_probs=71.2
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEE-cchhhHHH-HHHhCCCCCce
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH-GLAADSLK-ALILNGEASSY 196 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~-gd~~~~l~-~l~~~~~~~~f 196 (282)
++.+|||||||+|.++..+++. + .++|+|+|+++.|++.+.++ ..++.... .++..... .+ ...+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~l----~~~~f 152 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVDF----TEGLP 152 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGGC----TTCCC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh------CcccceecccCceecchhhC----CCCCC
Confidence 4679999999999999999885 2 46999999999999875432 12444332 34332211 11 12459
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|+|++|.........+..+.++ |+|||.+++
T Consensus 153 D~v~~d~sf~sl~~vL~e~~rv---LkpGG~lv~ 183 (291)
T 3hp7_A 153 SFASIDVSFISLNLILPALAKI---LVDGGQVVA 183 (291)
T ss_dssp SEEEECCSSSCGGGTHHHHHHH---SCTTCEEEE
T ss_pred CEEEEEeeHhhHHHHHHHHHHH---cCcCCEEEE
Confidence 9999998877777889999999 999999877
No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.14 E-value=1.8e-11 Score=104.46 Aligned_cols=97 Identities=13% Similarity=0.175 Sum_probs=67.1
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc-chhhHH-HHHHhCCCCCce
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSL-KALILNGEASSY 196 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l-~~l~~~~~~~~f 196 (282)
++++|||||||+|.++..+++. + ..+|+|+|+++++++.++++.. ++..... +..... ..+ ....|
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~~----~~~~~ 104 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLADF----EQGRP 104 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGGC----CSCCC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhHc----CcCCC
Confidence 4679999999999999999986 2 2599999999999998766432 2322211 221110 011 01236
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|.+.+|.........+..+.++ |||||.+++
T Consensus 105 d~~~~D~v~~~l~~~l~~i~rv---LkpgG~lv~ 135 (232)
T 3opn_A 105 SFTSIDVSFISLDLILPPLYEI---LEKNGEVAA 135 (232)
T ss_dssp SEEEECCSSSCGGGTHHHHHHH---SCTTCEEEE
T ss_pred CEEEEEEEhhhHHHHHHHHHHh---ccCCCEEEE
Confidence 7777776655567788999999 999999988
No 245
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.13 E-value=1.7e-10 Score=99.11 Aligned_cols=145 Identities=8% Similarity=0.029 Sum_probs=98.8
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||+|-+++.++...| ..+|+++|+++.+++.+++++..+|+. .++.+.|.....+ .++||
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p-------~~~~D 200 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRL-------DEPAD 200 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCC-------CSCCS
T ss_pred CCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCC-------CCCcc
Confidence 5688999999999999999887554 789999999999999999999999876 6888888765332 68999
Q ss_pred EEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCC-CCCcccCCcCCChhhHHHHHHHHHhhhCCCeEEEEee
Q 023411 198 FAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVL-WHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVP 271 (282)
Q Consensus 198 lV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 271 (282)
++++.-..+.. ...+ .+..- |+++|++|--+.. ..|. .- . -..-..++++....+.++..-.+-
T Consensus 201 vaL~lkti~~Le~q~kg~g~-~ll~a---L~~~~vvVSfp~ksl~Gr----s~-g-m~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 201 VTLLLKTLPCLETQQRGSGW-EVIDI---VNSPNIVVTFPTKSLGQR----SK-G-MFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp EEEETTCHHHHHHHSTTHHH-HHHHH---SSCSEEEEEEECC------------C-HHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hHHHHHHHHHhhhhhhHHHH-HHHHH---hCCCCEEEeccchhhcCC----Cc-c-hhhHHHHHHHHHHHhcCCceeeee
Confidence 99987663332 2234 45555 8999999886662 1111 00 0 011122333333333455666677
Q ss_pred cCCceEEEEEC
Q 023411 272 IGDGMTICQKR 282 (282)
Q Consensus 272 ~~~Gl~~~~k~ 282 (282)
+++=|..+.+|
T Consensus 271 ~~nEl~y~i~k 281 (281)
T 3lcv_B 271 IGNELIYVIQK 281 (281)
T ss_dssp ETTEEEEEEC-
T ss_pred ecCeeEEEecC
Confidence 77776666543
No 246
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.12 E-value=1.4e-10 Score=101.73 Aligned_cols=106 Identities=15% Similarity=0.206 Sum_probs=87.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh--C--CCCcEEEEEcchhhHHHHHHhCCC
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--G--VSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g--~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
...+++||-||.|.|..+..+++..+ ..+|+.||+++..++.+++.+... + -+.|++++.+|+.+++...
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~----- 154 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT----- 154 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-----
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-----
Confidence 45788999999999999999998654 579999999999999999998642 1 2468999999999876543
Q ss_pred CCceeEEEEcCCcc-------ccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 193 ASSYDFAFVDAEKR-------MYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 193 ~~~fDlV~id~~~~-------~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.++||+|++|.... ...++++.+.+. |+|||+++..
T Consensus 155 ~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~---L~p~Gv~v~q 197 (294)
T 3o4f_A 155 SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRC---LNPGGIFVAQ 197 (294)
T ss_dssp SCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHT---EEEEEEEEEE
T ss_pred cccCCEEEEeCCCcCCCchhhcCHHHHHHHHHH---hCCCCEEEEe
Confidence 58999999996521 246789999998 9999999985
No 247
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.12 E-value=4.5e-10 Score=99.38 Aligned_cols=88 Identities=16% Similarity=0.098 Sum_probs=71.9
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
+...++.+|||+|||+|..+..+++.++ +++|+++|+|+++++.|+++++.++ ++++++++|+.+....+...+ ..
T Consensus 22 L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g-~~ 97 (301)
T 1m6y_A 22 LKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLG-IE 97 (301)
T ss_dssp HCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTT-CS
T ss_pred cCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcC-CC
Confidence 3445778999999999999999999987 7899999999999999999998877 579999999876533232111 25
Q ss_pred ceeEEEEcCCcc
Q 023411 195 SYDFAFVDAEKR 206 (282)
Q Consensus 195 ~fDlV~id~~~~ 206 (282)
+||.|++|.+..
T Consensus 98 ~~D~Vl~D~gvS 109 (301)
T 1m6y_A 98 KVDGILMDLGVS 109 (301)
T ss_dssp CEEEEEEECSCC
T ss_pred CCCEEEEcCccc
Confidence 899999998643
No 248
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.11 E-value=2.1e-10 Score=105.24 Aligned_cols=119 Identities=14% Similarity=0.156 Sum_probs=89.7
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCC---C----------------------------------C
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLP---E----------------------------------S 144 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~---~----------------------------------~ 144 (282)
.+.+..+..+..++...++..|||.+||+|.+++.++.... + .
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 35666666666677677788999999999999988776532 1 1
Q ss_pred CEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCcc-------ccHHHHHHHHH
Q 023411 145 GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFELLLQ 217 (282)
Q Consensus 145 ~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~-------~~~~~l~~~~~ 217 (282)
.+|+|+|+++.+++.|++++..+|+.++++++++|+.+... .++||+|+++.+.. ....++..+.+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~ 336 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-------EDEYGVVVANPPYGERLEDEEAVRQLYREMGI 336 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-------CCCCCEEEECCCCccccCCchhHHHHHHHHHH
Confidence 56999999999999999999999998889999999987532 46899999998843 22334444555
Q ss_pred hhcCCCC--CcEEEE
Q 023411 218 LLLQIRV--GGIIVI 230 (282)
Q Consensus 218 ~~~~Lkp--gG~lv~ 230 (282)
. |++ ||.+.+
T Consensus 337 ~---lk~~~g~~~~i 348 (393)
T 3k0b_A 337 V---YKRMPTWSVYV 348 (393)
T ss_dssp H---HHTCTTCEEEE
T ss_pred H---HhcCCCCEEEE
Confidence 4 444 665544
No 249
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.09 E-value=2.5e-10 Score=95.43 Aligned_cols=95 Identities=15% Similarity=0.138 Sum_probs=72.0
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH
Q 023411 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (282)
Q Consensus 108 ~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l 187 (282)
..++..+....++.+|||||||+|..+..++ .+++++|+++. +++++++|+.+. + .
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~-~-~ 111 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQV-P-L 111 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSC-S-C
T ss_pred HHHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccC-C-C
Confidence 3455555555677899999999999887662 58999999987 367888888653 1 1
Q ss_pred HhCCCCCceeEEEEcCCc--cccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 188 ILNGEASSYDFAFVDAEK--RMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 188 ~~~~~~~~fDlV~id~~~--~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
..++||+|++.... .+....++.+.++ |+|||.+++.+.
T Consensus 112 ----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~---L~~gG~l~i~~~ 152 (215)
T 2zfu_A 112 ----EDESVDVAVFCLSLMGTNIRDFLEEANRV---LKPGGLLKVAEV 152 (215)
T ss_dssp ----CTTCEEEEEEESCCCSSCHHHHHHHHHHH---EEEEEEEEEEEC
T ss_pred ----CCCCEeEEEEehhccccCHHHHHHHHHHh---CCCCeEEEEEEc
Confidence 14789999987653 3456778888888 999999999654
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.09 E-value=9.1e-10 Score=97.10 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=78.7
Q ss_pred CCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc
Q 023411 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (282)
Q Consensus 100 ~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (282)
.+.+++.....+...+...++.+|||||||+|..|..+++. ..+|++||+++++++.+++++.. . ++++++++|
T Consensus 31 nfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~--~-~~v~vi~gD 104 (295)
T 3gru_A 31 CFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKEL--Y-NNIEIIWGD 104 (295)
T ss_dssp CEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHH--C-SSEEEEESC
T ss_pred cccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhcc--C-CCeEEEECc
Confidence 35567777777777777778889999999999999999987 47999999999999999999873 2 369999999
Q ss_pred hhhHHHHHHhCCCCCceeEEEEcCCccccHH
Q 023411 180 AADSLKALILNGEASSYDFAFVDAEKRMYQE 210 (282)
Q Consensus 180 ~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~ 210 (282)
+.+.... ..+||.|+.+.+..-...
T Consensus 105 ~l~~~~~------~~~fD~Iv~NlPy~is~p 129 (295)
T 3gru_A 105 ALKVDLN------KLDFNKVVANLPYQISSP 129 (295)
T ss_dssp TTTSCGG------GSCCSEEEEECCGGGHHH
T ss_pred hhhCCcc------cCCccEEEEeCcccccHH
Confidence 9864211 357999998877554433
No 251
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.08 E-value=5.4e-10 Score=102.12 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=90.5
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCC-------------------------------------C
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE-------------------------------------S 144 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~-------------------------------------~ 144 (282)
.+.+..+..+..+....++..++|.+||+|.+.+.++..... .
T Consensus 177 pl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 177 PIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 345566666666777778889999999999999887764321 1
Q ss_pred CEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCcc-------ccHHHHHHHHH
Q 023411 145 GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFELLLQ 217 (282)
Q Consensus 145 ~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~-------~~~~~l~~~~~ 217 (282)
.+++|+|+++.+++.|++|++.+|+.++++++++|+.+... .++||+|++|.+.. ....++..+.+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~ 329 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT-------NKINGVLISNPPYGERLLDDKAVDILYNEMGE 329 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC-------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc-------cCCcCEEEECCchhhccCCHHHHHHHHHHHHH
Confidence 56999999999999999999999999899999999987532 36899999998742 23445555555
Q ss_pred hhcCCCC--CcEEEE
Q 023411 218 LLLQIRV--GGIIVI 230 (282)
Q Consensus 218 ~~~~Lkp--gG~lv~ 230 (282)
. |++ ||.+.+
T Consensus 330 ~---lk~~~g~~~~i 341 (384)
T 3ldg_A 330 T---FAPLKTWSQFI 341 (384)
T ss_dssp H---HTTCTTSEEEE
T ss_pred H---HhhCCCcEEEE
Confidence 5 554 765544
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.07 E-value=2.7e-10 Score=104.28 Aligned_cols=118 Identities=14% Similarity=0.131 Sum_probs=87.7
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCC-------------------------------------CCC
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLP-------------------------------------ESG 145 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~-------------------------------------~~~ 145 (282)
+.+..+..+..+....++..|||.|||+|.+++.++.... ...
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 3455555555555666788999999999999998877532 125
Q ss_pred EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc-------cHHHHHHHHHh
Q 023411 146 CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-------YQEYFELLLQL 218 (282)
Q Consensus 146 ~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~-------~~~~l~~~~~~ 218 (282)
+|+|+|+++.+++.|++++..+|+.+.+++.++|+.+... .++||+|+++++... ....+..+.+.
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~ 331 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS-------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYA 331 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC-------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc-------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHH
Confidence 7999999999999999999999998889999999987532 468999999988432 23344445455
Q ss_pred hcCCCC--CcEEEE
Q 023411 219 LLQIRV--GGIIVI 230 (282)
Q Consensus 219 ~~~Lkp--gG~lv~ 230 (282)
|++ |+.+.+
T Consensus 332 ---lk~~~g~~~~i 342 (385)
T 3ldu_A 332 ---FRKLKNWSYYL 342 (385)
T ss_dssp ---HHTSBSCEEEE
T ss_pred ---HhhCCCCEEEE
Confidence 544 655443
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.07 E-value=1.8e-10 Score=106.16 Aligned_cols=109 Identities=16% Similarity=0.202 Sum_probs=82.1
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
...+....++..++...++.+|||+|||+|.++..+++..+...+++|+|+++.+++.| .+++++++|+.
T Consensus 22 ~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~ 91 (421)
T 2ih2_A 22 ETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFL 91 (421)
T ss_dssp CCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGG
T ss_pred eCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChh
Confidence 44555666666666544567999999999999999998764368999999999998766 36999999997
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCcc--------------c------------------cHHHHHHHHHhhcCCCCCcEEE
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKR--------------M------------------YQEYFELLLQLLLQIRVGGIIV 229 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~--------------~------------------~~~~l~~~~~~~~~LkpgG~lv 229 (282)
+..+ .++||+|+++++.. . +..+++.+.++ |+|||.++
T Consensus 92 ~~~~-------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~---Lk~~G~~~ 161 (421)
T 2ih2_A 92 LWEP-------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRL---LKPGGVLV 161 (421)
T ss_dssp GCCC-------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHH---EEEEEEEE
T ss_pred hcCc-------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHH---hCCCCEEE
Confidence 6421 46899999975421 0 11456677777 99999887
Q ss_pred E
Q 023411 230 I 230 (282)
Q Consensus 230 ~ 230 (282)
+
T Consensus 162 ~ 162 (421)
T 2ih2_A 162 F 162 (421)
T ss_dssp E
T ss_pred E
Confidence 6
No 254
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.06 E-value=2.5e-10 Score=109.67 Aligned_cols=105 Identities=17% Similarity=0.211 Sum_probs=77.5
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.++.+|||||||.|..+..||+. +++|+|||+++.+++.|+......|.. ++++.++++.+..... ++++||
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~----~~~~fD 136 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAAL----EEGEFD 136 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHC----CTTSCS
T ss_pred CCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhc----cCCCcc
Confidence 35679999999999999999985 689999999999999999999887754 4999999997765432 157899
Q ss_pred EEEEcCCccccHHH--HHHHHHhhcCCCCCcEEEE
Q 023411 198 FAFVDAEKRMYQEY--FELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 198 lV~id~~~~~~~~~--l~~~~~~~~~LkpgG~lv~ 230 (282)
+|++-...++..+. +..+.++.+.|+++|...+
T Consensus 137 ~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 137 LAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp EEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred EEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 99998775554321 1122222222666664444
No 255
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.04 E-value=2.6e-10 Score=103.68 Aligned_cols=100 Identities=15% Similarity=0.126 Sum_probs=78.2
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ ..+++++.+|+.+.. ... |
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~--------p~~-D 263 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPA-------FSGVEHLGGDMFDGV--------PKG-D 263 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTCC--------CCC-S
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhh-------cCCCEEEecCCCCCC--------CCC-C
Confidence 3568999999999999999999987 789999999 888766553 247999999987521 223 9
Q ss_pred EEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 198 FAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 198 lV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
+|++....+++ ...++.+.+. |+|||.|++.+...+..
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~---L~pgG~l~i~e~~~~~~ 306 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAA---LPDHGKVIVAEYILPPS 306 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHH---SCTTCEEEEEECCCCSS
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHH---cCCCCEEEEEEeccCCC
Confidence 99987765432 3467777777 99999999888776554
No 256
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.04 E-value=3.7e-10 Score=103.65 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=67.7
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHh--CCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
++.+|||+|||+|..++.+++. +++|+++|+|+.+++.|+++++.+ |+ ++++++++|+.+.++... .++|
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~----~~~f 164 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK----TFHP 164 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH----HHCC
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc----CCCc
Confidence 3789999999999999999875 479999999999999999999988 87 579999999988665431 3589
Q ss_pred eEEEEcCC
Q 023411 197 DFAFVDAE 204 (282)
Q Consensus 197 DlV~id~~ 204 (282)
|+||+|.+
T Consensus 165 DvV~lDPP 172 (410)
T 3ll7_A 165 DYIYVDPA 172 (410)
T ss_dssp SEEEECCE
T ss_pred eEEEECCC
Confidence 99999965
No 257
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.04 E-value=4e-10 Score=102.37 Aligned_cols=101 Identities=16% Similarity=0.099 Sum_probs=78.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ .++++++.+|+.+.. ...
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~~~--------p~~- 260 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMFKEV--------PSG- 260 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTCC--------CCC-
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcCCCC--------CCC-
Confidence 34578999999999999999999987 789999999 887766553 257999999987521 223
Q ss_pred eEEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 197 DFAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 197 DlV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
|+|++....+++ ...++.+.+. |+|||.|++.+...+..
T Consensus 261 D~v~~~~vlh~~~d~~~~~~L~~~~~~---L~pgG~l~i~e~~~~~~ 304 (364)
T 3p9c_A 261 DTILMKWILHDWSDQHCATLLKNCYDA---LPAHGKVVLVQCILPVN 304 (364)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHH---SCTTCEEEEEECCBCSS
T ss_pred CEEEehHHhccCCHHHHHHHHHHHHHH---cCCCCEEEEEEeccCCC
Confidence 999987765433 3567777777 99999998887776553
No 258
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.04 E-value=4.9e-09 Score=89.09 Aligned_cols=101 Identities=11% Similarity=0.016 Sum_probs=77.4
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
....++.+|||||||+|.+++.++ + ..+|+++|+++.+++.+++++...|. +.++..+|.....+ .+
T Consensus 101 ~~~~~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~-------~~ 167 (253)
T 3frh_A 101 FSAETPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPP-------AE 167 (253)
T ss_dssp TSSCCCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCC-------CC
T ss_pred hcCCCCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCC-------CC
Confidence 333578899999999999998877 3 78999999999999999999988774 47899888865432 57
Q ss_pred ceeEEEEcCCccc-----cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 195 SYDFAFVDAEKRM-----YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 195 ~fDlV~id~~~~~-----~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+||+|++.-..+. ....+ .+..- |+++|++|--.
T Consensus 168 ~~DvvLllk~lh~LE~q~~~~~~-~ll~a---L~~~~vvVsfP 206 (253)
T 3frh_A 168 AGDLALIFKLLPLLEREQAGSAM-ALLQS---LNTPRMAVSFP 206 (253)
T ss_dssp BCSEEEEESCHHHHHHHSTTHHH-HHHHH---CBCSEEEEEEE
T ss_pred CcchHHHHHHHHHhhhhchhhHH-HHHHH---hcCCCEEEEcC
Confidence 9999987644221 22234 44445 89999888765
No 259
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.01 E-value=2.5e-10 Score=103.08 Aligned_cols=100 Identities=14% Similarity=0.150 Sum_probs=78.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ . .+++++.+|+.+. + ..|
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~---~------p~~ 247 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFTS---I------PNA 247 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTTC---C------CCC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------C-CCcEEEeccccCC---C------CCc
Confidence 34668999999999999999999887 689999999 988877664 1 2499999998652 1 249
Q ss_pred eEEEEcCCcccc-----HHHHHHHHHhhcCCCC---CcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKRMY-----QEYFELLLQLLLQIRV---GGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~~~-----~~~l~~~~~~~~~Lkp---gG~lv~dd~~~~g 237 (282)
|+|++....+++ ...++.+.+. |+| ||.+++.+..++.
T Consensus 248 D~v~~~~~lh~~~d~~~~~~l~~~~~~---L~p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 248 DAVLLKYILHNWTDKDCLRILKKCKEA---VTNDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHH---HSGGGCCCEEEEEECEECT
T ss_pred cEEEeehhhccCCHHHHHHHHHHHHHh---CCCCCCCcEEEEEEeecCC
Confidence 999987764432 2567777777 999 9999887776554
No 260
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.00 E-value=2.1e-10 Score=104.40 Aligned_cols=99 Identities=15% Similarity=0.119 Sum_probs=78.2
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ . .+++++.+|+.+. + .. ||
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~---~-----~~-~D 269 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFAS---V-----PQ-GD 269 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTTC---C-----CC-EE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCcccC---C-----CC-CC
Confidence 4568999999999999999999987 689999999 888877654 1 3599999999752 1 23 99
Q ss_pred EEEEcCCcccc-----HHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 198 FAFVDAEKRMY-----QEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 198 lV~id~~~~~~-----~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
+|++....+++ ...++.+.+. |+|||.+++.+...+.
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~~~---L~pgG~l~i~e~~~~~ 311 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCHKA---LSPNGKVIIVEFILPE 311 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHH---EEEEEEEEEEEEEECS
T ss_pred EEEEecccccCCHHHHHHHHHHHHHh---cCCCCEEEEEEeccCC
Confidence 99998775443 2567777777 9999999988776554
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.99 E-value=4.6e-10 Score=104.66 Aligned_cols=120 Identities=9% Similarity=0.075 Sum_probs=93.3
Q ss_pred CccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCC------------CCCEEEEEecCccHHHHHHHHHHHhC
Q 023411 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLP------------ESGCLVACERDARSLEVAKKYYERAG 168 (282)
Q Consensus 101 ~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~------------~~~~v~~iD~s~~~~~~a~~~~~~~g 168 (282)
.........++..++...++.+|+|.|||+|.+.+.+++.+. ...+++|+|+++.+++.|+.++...|
T Consensus 153 fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g 232 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG 232 (445)
T ss_dssp GCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT
T ss_pred ccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC
Confidence 345666677777777777778999999999999999887641 13579999999999999999999888
Q ss_pred CCC-cEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc--------------------cHHHHHHHHHhhcCCCCCcE
Q 023411 169 VSH-KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--------------------YQEYFELLLQLLLQIRVGGI 227 (282)
Q Consensus 169 ~~~-~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~--------------------~~~~l~~~~~~~~~LkpgG~ 227 (282)
+.. .++++++|+..... .++||+|+.+++... ...+++.+.++ |+|||.
T Consensus 233 ~~~~~~~i~~gD~l~~~~-------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~---Lk~gG~ 302 (445)
T 2okc_A 233 IGTDRSPIVCEDSLEKEP-------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLM---LKTGGR 302 (445)
T ss_dssp CCSSCCSEEECCTTTSCC-------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHH---EEEEEE
T ss_pred CCcCCCCEeeCCCCCCcc-------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHH---hccCCE
Confidence 753 57899999875421 358999999866221 13577888888 999998
Q ss_pred EEE
Q 023411 228 IVI 230 (282)
Q Consensus 228 lv~ 230 (282)
+++
T Consensus 303 ~a~ 305 (445)
T 2okc_A 303 AAV 305 (445)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.95 E-value=2.2e-09 Score=92.74 Aligned_cols=97 Identities=11% Similarity=0.046 Sum_probs=74.9
Q ss_pred CCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc
Q 023411 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (282)
Q Consensus 100 ~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (282)
.+..++.....+...+...++.+|||||||+|..|..+++. +++|+++|+++++++.+++++.. .++++++++|
T Consensus 10 nFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D 83 (255)
T 3tqs_A 10 HFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQND 83 (255)
T ss_dssp CEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESC
T ss_pred ccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcc
Confidence 34566777777777777778899999999999999999985 37999999999999999998864 3469999999
Q ss_pred hhhHH-HHHHhCCCCCceeEEEEcCCcc
Q 023411 180 AADSL-KALILNGEASSYDFAFVDAEKR 206 (282)
Q Consensus 180 ~~~~l-~~l~~~~~~~~fDlV~id~~~~ 206 (282)
+.+.. +.+. ..++|| |+.+.+..
T Consensus 84 ~~~~~~~~~~---~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 84 ALQFDFSSVK---TDKPLR-VVGNLPYN 107 (255)
T ss_dssp TTTCCGGGSC---CSSCEE-EEEECCHH
T ss_pred hHhCCHHHhc---cCCCeE-EEecCCcc
Confidence 98752 2210 125688 66666644
No 263
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.95 E-value=5.7e-10 Score=96.51 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=69.3
Q ss_pred HHHHHHhhcCC--CEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC--------CCCcEEEEEcc
Q 023411 110 LLAMLVQILGA--QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--------VSHKVKIKHGL 179 (282)
Q Consensus 110 ll~~l~~~~~~--~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--------~~~~v~~~~gd 179 (282)
.+...+...++ .+|||+|||+|..++.+++. +++|++||+++.+.+.++++++... +.++++++++|
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 34455555566 89999999999999999987 4689999999998888887776442 33579999999
Q ss_pred hhhHHHHHHhCCCCCceeEEEEcCCc
Q 023411 180 AADSLKALILNGEASSYDFAFVDAEK 205 (282)
Q Consensus 180 ~~~~l~~l~~~~~~~~fDlV~id~~~ 205 (282)
+.+.++.+ .++||+||+|+..
T Consensus 154 ~~~~L~~~-----~~~fDvV~lDP~y 174 (258)
T 2oyr_A 154 SLTALTDI-----TPRPQVVYLDPMF 174 (258)
T ss_dssp HHHHSTTC-----SSCCSEEEECCCC
T ss_pred HHHHHHhC-----cccCCEEEEcCCC
Confidence 98766543 3579999999864
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.93 E-value=4e-09 Score=91.86 Aligned_cols=119 Identities=14% Similarity=0.056 Sum_probs=85.0
Q ss_pred CCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEE
Q 023411 98 GSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH 177 (282)
Q Consensus 98 ~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~ 177 (282)
+..+..++.....+...+...++ +|||||||+|..|..+++. +++|+++|+|+++++.+++++. ..++++++
T Consensus 26 GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~----~~~v~vi~ 97 (271)
T 3fut_A 26 GQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLS----GLPVRLVF 97 (271)
T ss_dssp SCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTT----TSSEEEEE
T ss_pred CccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcC----CCCEEEEE
Confidence 33455677777777777777777 9999999999999999986 3689999999999999998875 24699999
Q ss_pred cchhhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 178 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 178 gd~~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|+.+....- ...+|.|+.+.+..-....+..+... . .-..+++++.
T Consensus 98 ~D~l~~~~~~-----~~~~~~iv~NlPy~iss~il~~ll~~-~-~~~~~~lm~Q 144 (271)
T 3fut_A 98 QDALLYPWEE-----VPQGSLLVANLPYHIATPLVTRLLKT-G-RFARLVFLVQ 144 (271)
T ss_dssp SCGGGSCGGG-----SCTTEEEEEEECSSCCHHHHHHHHHH-C-CEEEEEEEEE
T ss_pred CChhhCChhh-----ccCccEEEecCcccccHHHHHHHhcC-C-CCCEEEEEee
Confidence 9998752110 13689999887755544444444332 1 1234555554
No 265
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.93 E-value=1.3e-08 Score=91.95 Aligned_cols=120 Identities=13% Similarity=0.090 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCC-----CcEEEEEcch
Q 023411 106 DQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS-----HKVKIKHGLA 180 (282)
Q Consensus 106 ~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-----~~v~~~~gd~ 180 (282)
....+...++...++.+|||+++|.|+-|..++.... ++.|+++|+++..++..+++++..+.. +++.+...|+
T Consensus 135 ~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 135 AASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp GGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch
Confidence 4455666677788899999999999999999998664 578999999999999999999988764 4689999998
Q ss_pred hhHHHHHHhCCCCCceeEEEEcCCccc---------------------------cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 181 ADSLKALILNGEASSYDFAFVDAEKRM---------------------------YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 181 ~~~l~~l~~~~~~~~fDlV~id~~~~~---------------------------~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
....+.. .+.||.|++|++... ....++...++ |||||+||..-.
T Consensus 214 ~~~~~~~-----~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~---lkpGG~LVYsTC 285 (359)
T 4fzv_A 214 RKWGELE-----GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLA---TKPGGHVVYSTC 285 (359)
T ss_dssp GGHHHHS-----TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHT---EEEEEEEEEEES
T ss_pred hhcchhc-----cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhc---CCCCcEEEEEeC
Confidence 7654432 579999999976211 12234444555 999999998655
Q ss_pred C
Q 023411 234 L 234 (282)
Q Consensus 234 ~ 234 (282)
-
T Consensus 286 S 286 (359)
T 4fzv_A 286 S 286 (359)
T ss_dssp C
T ss_pred C
Confidence 4
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.91 E-value=4e-09 Score=100.55 Aligned_cols=123 Identities=8% Similarity=-0.014 Sum_probs=94.1
Q ss_pred CCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCC-----------------CCEEEEEecCccHHHHHHH
Q 023411 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE-----------------SGCLVACERDARSLEVAKK 162 (282)
Q Consensus 100 ~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~-----------------~~~v~~iD~s~~~~~~a~~ 162 (282)
..........++..++...++.+|+|.+||+|.+.+.+++.+.. ...++|+|+++.+++.|+.
T Consensus 150 ~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~ 229 (541)
T 2ar0_A 150 QYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALM 229 (541)
T ss_dssp CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHH
T ss_pred eeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHH
Confidence 34455666777777777777789999999999999988876532 1379999999999999999
Q ss_pred HHHHhCCCC----cEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc-----------------cHHHHHHHHHhhcC
Q 023411 163 YYERAGVSH----KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-----------------YQEYFELLLQLLLQ 221 (282)
Q Consensus 163 ~~~~~g~~~----~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~-----------------~~~~l~~~~~~~~~ 221 (282)
++...|... ++.++++|+....... .++||+|+.+++... ...++..+.++
T Consensus 230 nl~l~gi~~~~~~~~~I~~gDtL~~~~~~-----~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~--- 301 (541)
T 2ar0_A 230 NCLLHDIEGNLDHGGAIRLGNTLGSDGEN-----LPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIET--- 301 (541)
T ss_dssp HHHTTTCCCBGGGTBSEEESCTTSHHHHT-----SCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHH---
T ss_pred HHHHhCCCccccccCCeEeCCCccccccc-----ccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHH---
Confidence 998888764 3789999987653321 478999999876221 12577777787
Q ss_pred CCCCcEEEE
Q 023411 222 IRVGGIIVI 230 (282)
Q Consensus 222 LkpgG~lv~ 230 (282)
|+|||.+++
T Consensus 302 Lk~gGr~a~ 310 (541)
T 2ar0_A 302 LHPGGRAAV 310 (541)
T ss_dssp EEEEEEEEE
T ss_pred hCCCCEEEE
Confidence 999997765
No 267
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.90 E-value=1.8e-10 Score=100.80 Aligned_cols=99 Identities=6% Similarity=-0.087 Sum_probs=67.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHH-HHhCCCCcEEEE--EcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYY-ERAGVSHKVKIK--HGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-~~~g~~~~v~~~--~gd~~~~l~~l~~~~~~~ 194 (282)
.++.+|||+|||+|.++..+++. ++|+|||+++ ++..+++.. .......+++++ ++|+.+. + ++
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~-------~~ 147 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM-E-------PF 147 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-C-------CC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC-C-------CC
Confidence 46779999999999999999975 5899999998 432222110 000111158899 8998763 1 47
Q ss_pred ceeEEEEcCCc--cc-----c--HHHHHHHHHhhcCCCCCc--EEEEeC
Q 023411 195 SYDFAFVDAEK--RM-----Y--QEYFELLLQLLLQIRVGG--IIVIDN 232 (282)
Q Consensus 195 ~fDlV~id~~~--~~-----~--~~~l~~~~~~~~~LkpgG--~lv~dd 232 (282)
+||+|++|... .. . ...++.+.++ |+||| .++++.
T Consensus 148 ~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~---LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 148 QADTVLCDIGESNPTAAVEASRTLTVLNVISRW---LEYNQGCGFCVKV 193 (276)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH---HHHSTTCEEEEEE
T ss_pred CcCEEEECCCcCCCchhhhHHHHHHHHHHHHHH---hccCCCcEEEEEe
Confidence 89999998651 11 1 1246666677 99999 998853
No 268
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.89 E-value=5.8e-09 Score=89.44 Aligned_cols=76 Identities=11% Similarity=0.076 Sum_probs=60.9
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+++.....+...+...++.+|||||||+|..+..+++.. ++|+++|+++++++.+++++.. .++++++++|+.
T Consensus 13 l~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~---~~~v~~~~~D~~ 86 (244)
T 1qam_A 13 ITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD---HDNFQVLNKDIL 86 (244)
T ss_dssp CCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT---CCSEEEECCCGG
T ss_pred cCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc---CCCeEEEEChHH
Confidence 4455555555555555677899999999999999999874 7999999999999999998763 246999999997
Q ss_pred hH
Q 023411 182 DS 183 (282)
Q Consensus 182 ~~ 183 (282)
+.
T Consensus 87 ~~ 88 (244)
T 1qam_A 87 QF 88 (244)
T ss_dssp GC
T ss_pred hC
Confidence 64
No 269
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.89 E-value=2e-09 Score=97.34 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=77.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ . .+++++.+|+.+ + ...|
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~--~-------~~~~ 252 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK--S-------IPSA 252 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT--C-------CCCC
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC--C-------CCCc
Confidence 34678999999999999999999987 689999999 777766553 2 349999999875 2 1359
Q ss_pred eEEEEcCCcccc-----HHHHHHHHHhhcCCCC---CcEEEEeCCCCCC
Q 023411 197 DFAFVDAEKRMY-----QEYFELLLQLLLQIRV---GGIIVIDNVLWHG 237 (282)
Q Consensus 197 DlV~id~~~~~~-----~~~l~~~~~~~~~Lkp---gG~lv~dd~~~~g 237 (282)
|+|++....+++ ...++.+.+. |+| ||.+++.+...+.
T Consensus 253 D~v~~~~vlh~~~d~~~~~~l~~~~~~---L~p~~~gG~l~i~e~~~~~ 298 (358)
T 1zg3_A 253 DAVLLKWVLHDWNDEQSLKILKNSKEA---ISHKGKDGKVIIIDISIDE 298 (358)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHH---TGGGGGGCEEEEEECEECT
T ss_pred eEEEEcccccCCCHHHHHHHHHHHHHh---CCCCCCCcEEEEEEeccCC
Confidence 999997764432 2567777777 999 9998887766543
No 270
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.88 E-value=3.9e-09 Score=92.74 Aligned_cols=89 Identities=20% Similarity=0.237 Sum_probs=66.7
Q ss_pred cCCCEEEEEcccc------cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEE-EEcchhhHHHHHHhC
Q 023411 118 LGAQRCIEVGVYT------GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKI-KHGLAADSLKALILN 190 (282)
Q Consensus 118 ~~~~~VLEIG~G~------G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~-~~gd~~~~l~~l~~~ 190 (282)
.++.+|||+|||+ |. ..+++.++++++|+++|+++. + .++++ +++|+.+.. .
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~--~--- 120 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVH--T--- 120 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCC--C---
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCC--c---
Confidence 4677999999954 66 556777776789999999998 1 25888 999997632 1
Q ss_pred CCCCceeEEEEcCCcc--------------ccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 191 GEASSYDFAFVDAEKR--------------MYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~--------------~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.++||+|+++.... .+...++.+.++ |||||.+++..
T Consensus 121 --~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~---LkpGG~~v~~~ 171 (290)
T 2xyq_A 121 --ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQK---LALGGSIAVKI 171 (290)
T ss_dssp --SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHH---EEEEEEEEEEE
T ss_pred --cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHh---cCCCcEEEEEE
Confidence 36899999975321 123567788888 99999999964
No 271
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.87 E-value=8.4e-09 Score=99.33 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=74.3
Q ss_pred CCEEEEEcccccHHHHHHHH---HCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 120 AQRCIEVGVYTGYSSLAIAL---VLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~---~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
...|+|+|||+|..+...++ ......+|++||.++ +...+++..+.+++.++|++++||..++. + ++++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~--L-----PEKV 429 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV--A-----PEKA 429 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC--C-----SSCE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc--C-----Cccc
Confidence 45799999999998544444 333224799999997 67789999999999999999999998752 2 5899
Q ss_pred eEEEEcCC-----ccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 197 DFAFVDAE-----KRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 197 DlV~id~~-----~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|+|+..-- .+.....+....++ |||||+++=+
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~---LKPgGimiPs 466 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHF---LKDDGVSIPG 466 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGG---EEEEEEEESC
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHh---cCCCcEEccc
Confidence 99996421 33344444444444 9999997644
No 272
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.87 E-value=5.8e-10 Score=98.89 Aligned_cols=96 Identities=10% Similarity=0.044 Sum_probs=66.4
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEec----CccHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHHhCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACER----DARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGE 192 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~----s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~l~~~~~ 192 (282)
.++.+|||+|||+|.++..+++. ++|++||+ ++.+++.+. .+..+ .++++++++ |+.+. +
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l-~------- 145 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI-P------- 145 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS-C-------
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC-C-------
Confidence 45679999999999999999975 57999999 453321110 11111 146999999 87653 1
Q ss_pred CCceeEEEEcCCcc--c----cH---HHHHHHHHhhcCCCCCcEEEEe
Q 023411 193 ASSYDFAFVDAEKR--M----YQ---EYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 193 ~~~fDlV~id~~~~--~----~~---~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.++||+|++|.... + .. ..+..+.++ |||||.++++
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~---LkpGG~~v~k 190 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENW---LSNNTQFCVK 190 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHH---CCTTCEEEEE
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHH---hCCCCEEEEE
Confidence 46899999986532 1 11 345556666 9999999985
No 273
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.87 E-value=2.4e-10 Score=99.42 Aligned_cols=100 Identities=11% Similarity=-0.022 Sum_probs=67.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHH-HHhCCCCcEEEE--EcchhhHHHHHHhCCCC
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYY-ERAGVSHKVKIK--HGLAADSLKALILNGEA 193 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-~~~g~~~~v~~~--~gd~~~~l~~l~~~~~~ 193 (282)
..++.+|||+|||+|.++..+++. ++|+|||+++ ++..+++.. .......+++++ ++|+.+. + +
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~-------~ 138 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL-P-------V 138 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS-C-------C
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC-C-------C
Confidence 346779999999999999999875 6899999998 432221110 000011158889 8898763 1 4
Q ss_pred CceeEEEEcCCc--ccc----H---HHHHHHHHhhcCCCCCc--EEEEeC
Q 023411 194 SSYDFAFVDAEK--RMY----Q---EYFELLLQLLLQIRVGG--IIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~--~~~----~---~~l~~~~~~~~~LkpgG--~lv~dd 232 (282)
++||+|++|... .+. . ..++.+.++ |+||| .+++..
T Consensus 139 ~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~---LkpGG~~~fv~kv 185 (265)
T 2oxt_A 139 ERTDVIMCDVGESSPKWSVESERTIKILELLEKW---KVKNPSADFVVKV 185 (265)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH---HHHCTTCEEEEEE
T ss_pred CCCcEEEEeCcccCCccchhHHHHHHHHHHHHHH---hccCCCeEEEEEe
Confidence 789999998651 111 1 246666677 99999 999854
No 274
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.84 E-value=9.5e-11 Score=100.57 Aligned_cols=114 Identities=10% Similarity=0.137 Sum_probs=79.5
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
.+.+.....+...+...++.+|||||||+|..+..+++.. ++|+++|+++++++.+++++. ..++++++++|+.
T Consensus 12 l~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~ 85 (245)
T 1yub_A 12 LTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDIL 85 (245)
T ss_dssp CCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCT
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc---cCCceEEEECChh
Confidence 3344444445555555677899999999999999999873 799999999999998887765 2357999999997
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccccHH--------------HH----HHHHHhhcCCCCCcEEEE
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRMYQE--------------YF----ELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~~~~--------------~l----~~~~~~~~~LkpgG~lv~ 230 (282)
+.. .. ..++| .|+.+.+...... .+ +.+.++ |+|||.+++
T Consensus 86 ~~~--~~---~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rl---l~~~G~l~v 143 (245)
T 1yub_A 86 QFQ--FP---NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRT---LDIHRTLGL 143 (245)
T ss_dssp TTT--CC---CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHH---HCGGGSHHH
T ss_pred hcC--cc---cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHH---hCCCCchhh
Confidence 642 10 02578 6676654222111 12 456666 999998755
No 275
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.83 E-value=6.5e-09 Score=93.98 Aligned_cols=146 Identities=14% Similarity=0.134 Sum_probs=101.7
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC---C----CCcEEEEEcchhhHHHHHHhCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG---V----SHKVKIKHGLAADSLKALILNG 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g---~----~~~v~~~~gd~~~~l~~l~~~~ 191 (282)
++++||-||.|.|..+..++++ + ..+++.||+++..++.+++.+.... . .++++++.+|+.+++......
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~- 281 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 281 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc-
Confidence 5789999999999999999986 4 3799999999999999999864311 1 246999999999988754322
Q ss_pred CCCceeEEEEcCCc-------c------ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHHHHH
Q 023411 192 EASSYDFAFVDAEK-------R------MYQEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKN 258 (282)
Q Consensus 192 ~~~~fDlV~id~~~-------~------~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~ 258 (282)
.++||+|++|... . ...++++.+.+. |+|||+++.+.-. +. . ...+..+.+.
T Consensus 282 -~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~---L~p~GVlv~Q~~s----~~----~---~~~~~~i~~t 346 (381)
T 3c6k_A 282 -GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKV---LKQDGKYFTQGNC----VN----L---TEALSLYEEQ 346 (381)
T ss_dssp -TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHT---EEEEEEEEEEEEE----TT----C---HHHHHHHHHH
T ss_pred -cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHh---cCCCCEEEEecCC----Cc----c---hhHHHHHHHH
Confidence 4689999999531 0 134577888888 9999999986311 11 0 1234555555
Q ss_pred hhhC-CCeEE----EEeec---CCceEEEEEC
Q 023411 259 LMED-ERVSI----SMVPI---GDGMTICQKR 282 (282)
Q Consensus 259 ~~~~-~~~~~----~~lp~---~~Gl~~~~k~ 282 (282)
+.+- +.+.. ..+|. ..|+.+|.|+
T Consensus 347 l~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 347 LGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 5442 44432 23453 4788888874
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.80 E-value=9.7e-09 Score=100.76 Aligned_cols=125 Identities=14% Similarity=0.112 Sum_probs=89.8
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHC---C------------------------------------
Q 023411 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVL---P------------------------------------ 142 (282)
Q Consensus 102 ~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~---~------------------------------------ 142 (282)
.+.+..+..+..++...++..|||.+||+|.+.+.++... +
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 3556666666666666778899999999999998877642 1
Q ss_pred --CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc-------cHHHHH
Q 023411 143 --ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-------YQEYFE 213 (282)
Q Consensus 143 --~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~-------~~~~l~ 213 (282)
...+++|+|+++.+++.|++|+..+|+.+.+++.++|+.+..+.. ..++||+|+++++... ...++.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~----~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~ 328 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL----PKGPYGTVLSNPPYGERLDSEPALIALHS 328 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC----TTCCCCEEEECCCCCC---CCHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc----ccCCCCEEEeCCCccccccchhHHHHHHH
Confidence 125799999999999999999999999988999999998742110 0238999999987432 233344
Q ss_pred HHHHhhcCCCCCcEEEE
Q 023411 214 LLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 214 ~~~~~~~~LkpgG~lv~ 230 (282)
.+.+..+.+.|||.+.+
T Consensus 329 ~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 329 LLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHhhCCCCeEEE
Confidence 44333122457886544
No 277
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.79 E-value=1.7e-08 Score=86.92 Aligned_cols=117 Identities=16% Similarity=0.089 Sum_probs=80.2
Q ss_pred CccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch
Q 023411 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (282)
Q Consensus 101 ~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (282)
...++.....+...+...++.+|||||||+|..+..+++. + ..+|+++|+|+.+++.++++ + ..+++++++|+
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~ 85 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----G-DERLEVINEDA 85 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcch
Confidence 4556666666666666677889999999999999999985 2 47999999999999999876 2 34699999999
Q ss_pred hhHH-HHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 181 ADSL-KALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 181 ~~~l-~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+.. +.+ .+.+ .|+.+.+..-....+..+.+. ...-+.+++++.
T Consensus 86 ~~~~~~~~-----~~~~-~vv~NlPy~i~~~il~~ll~~-~~~~~~~~~m~Q 130 (249)
T 3ftd_A 86 SKFPFCSL-----GKEL-KVVGNLPYNVASLIIENTVYN-KDCVPLAVFMVQ 130 (249)
T ss_dssp TTCCGGGS-----CSSE-EEEEECCTTTHHHHHHHHHHT-GGGCSEEEEEEE
T ss_pred hhCChhHc-----cCCc-EEEEECchhccHHHHHHHHhc-CCCCceEEEEEe
Confidence 7642 211 1233 666676655444444444432 112345566664
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.77 E-value=1.5e-08 Score=88.69 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=64.3
Q ss_pred CCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc
Q 023411 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 178 (282)
Q Consensus 100 ~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g 178 (282)
....++.....+...+...++.+|||||||+|..|..+++..+. +++|+++|+++++++.++++. ..+++++++
T Consensus 23 ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~ 97 (279)
T 3uzu_A 23 NFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAG 97 (279)
T ss_dssp CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEES
T ss_pred cccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEEC
Confidence 34566666666666667778889999999999999999987652 355999999999999999883 346999999
Q ss_pred chhhH
Q 023411 179 LAADS 183 (282)
Q Consensus 179 d~~~~ 183 (282)
|+.+.
T Consensus 98 D~~~~ 102 (279)
T 3uzu_A 98 DALTF 102 (279)
T ss_dssp CGGGC
T ss_pred ChhcC
Confidence 99875
No 279
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.73 E-value=1.4e-08 Score=96.85 Aligned_cols=124 Identities=11% Similarity=0.105 Sum_probs=92.6
Q ss_pred CCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCC--------------CCEEEEEecCccHHHHHHHH
Q 023411 98 GSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE--------------SGCLVACERDARSLEVAKKY 163 (282)
Q Consensus 98 ~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~--------------~~~v~~iD~s~~~~~~a~~~ 163 (282)
.+...+.+....+|..++...++ +|+|.+||+|.+.+.+++.+.. ...++|+|+++.+++.|+.+
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 34556778888888888876544 9999999999998887654421 35899999999999999999
Q ss_pred HHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc--------------------------------cHHH
Q 023411 164 YERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--------------------------------YQEY 211 (282)
Q Consensus 164 ~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~--------------------------------~~~~ 211 (282)
+..+|+..++.+.++|....... ...+||+|+.+++... ...+
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~F 377 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQH-----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAW 377 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCSC-----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHH
T ss_pred HHHhCCCcccceeccchhcCccc-----ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHH
Confidence 99999876666688887643111 1478999999866221 0146
Q ss_pred HHHHHHhhcCCCCCcEEEE
Q 023411 212 FELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 212 l~~~~~~~~~LkpgG~lv~ 230 (282)
+..+.++ |+|||.+++
T Consensus 378 l~~~l~~---Lk~gGr~ai 393 (544)
T 3khk_A 378 MLHMLYH---LAPTGSMAL 393 (544)
T ss_dssp HHHHHHT---EEEEEEEEE
T ss_pred HHHHHHH---hccCceEEE
Confidence 6777777 999998655
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.66 E-value=7.1e-08 Score=93.09 Aligned_cols=107 Identities=11% Similarity=-0.016 Sum_probs=72.6
Q ss_pred CCEEEEEcccccHHHHHHHHHCC------------CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLP------------ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~------------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l 187 (282)
.+.|||+|||+|..+...+.+.. ...+|++||.++.+....+... .+++.++|+++++|..++....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~-~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMN-VRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHH-HHTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHH-hcCCCCeEEEEeCchhhccccc
Confidence 45899999999999754333221 1349999999997765555444 4899999999999998863211
Q ss_pred HhCCCCCceeEEEEcCC-----ccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 188 ILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 188 ~~~~~~~~fDlV~id~~-----~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
...+ .++.|+|+..-- .+...+.+..+.+. |+|||+++=+
T Consensus 489 ~~~~-~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~---Lkp~Gi~iP~ 533 (745)
T 3ua3_A 489 KDRG-FEQPDIIVSELLGSFGDNELSPECLDGVTGF---LKPTTISIPQ 533 (745)
T ss_dssp HHTT-CCCCSEEEECCCBTTBGGGSHHHHHHTTGGG---SCTTCEEESC
T ss_pred ccCC-CCcccEEEEeccccccchhccHHHHHHHHHh---CCCCcEEECC
Confidence 1111 479999997532 23334445555555 9999987644
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.65 E-value=5.6e-08 Score=83.73 Aligned_cols=100 Identities=11% Similarity=-0.105 Sum_probs=68.3
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 103 ~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
+++.....+...+...++.+|||||||+|..|. +.. .+ ..+|+++|+++++++.+++++... ++++++++|+.+
T Consensus 5 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~ 78 (252)
T 1qyr_A 5 NDQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMT 78 (252)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGG
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhh
Confidence 344555555555666677899999999999999 654 22 234999999999999999876532 369999999987
Q ss_pred H-HHHHHhCCCCCceeEEEEcCCccccHH
Q 023411 183 S-LKALILNGEASSYDFAFVDAEKRMYQE 210 (282)
Q Consensus 183 ~-l~~l~~~~~~~~fDlV~id~~~~~~~~ 210 (282)
. ++..... .+..|.|+.+.+..-...
T Consensus 79 ~~~~~~~~~--~~~~~~vvsNlPY~i~~~ 105 (252)
T 1qyr_A 79 FNFGELAEK--MGQPLRVFGNLPYNISTP 105 (252)
T ss_dssp CCHHHHHHH--HTSCEEEEEECCTTTHHH
T ss_pred CCHHHhhcc--cCCceEEEECCCCCccHH
Confidence 4 3332100 023467777766544333
No 282
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.63 E-value=1.3e-07 Score=90.04 Aligned_cols=126 Identities=10% Similarity=0.100 Sum_probs=96.2
Q ss_pred CCCCccCHHHHHHHHHHHh----hcCCCEEEEEcccccHHHHHHHHHCCC--CCEEEEEecCccHHHHHHHHHHHhCCC-
Q 023411 98 GSQMQVSPDQAQLLAMLVQ----ILGAQRCIEVGVYTGYSSLAIALVLPE--SGCLVACERDARSLEVAKKYYERAGVS- 170 (282)
Q Consensus 98 ~~~~~~~~~~~~ll~~l~~----~~~~~~VLEIG~G~G~~t~~la~~~~~--~~~v~~iD~s~~~~~~a~~~~~~~g~~- 170 (282)
.+...+.+....+|..++. ..++.+|+|.+||+|.+.+.+++.+.. ...++|+|+++.++..|+.++..+|+.
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 3455677888888888887 456779999999999999999988742 468999999999999999999988885
Q ss_pred CcEEEEEcchhhHH-HHHHhCCCCCceeEEEEcCCccc----------------c----------HHHHHHHHHhhcCCC
Q 023411 171 HKVKIKHGLAADSL-KALILNGEASSYDFAFVDAEKRM----------------Y----------QEYFELLLQLLLQIR 223 (282)
Q Consensus 171 ~~v~~~~gd~~~~l-~~l~~~~~~~~fDlV~id~~~~~----------------~----------~~~l~~~~~~~~~Lk 223 (282)
+++.+.++|..... +. ....+||+|+.+++... + ..++..+.++ |+
T Consensus 276 ~~~~I~~gDtL~~d~p~----~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~---Lk 348 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWPT----QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYH---LK 348 (542)
T ss_dssp GGEEEEESCTTTSCSCC----SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHT---BC
T ss_pred CccceEecceecccccc----cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHH---hC
Confidence 46899999987531 11 11478999998865110 0 1256666676 99
Q ss_pred -CCcEEEE
Q 023411 224 -VGGIIVI 230 (282)
Q Consensus 224 -pgG~lv~ 230 (282)
+||.+.+
T Consensus 349 ~~gGr~a~ 356 (542)
T 3lkd_A 349 QDNGVMAI 356 (542)
T ss_dssp TTTCEEEE
T ss_pred CCceeEEE
Confidence 9998755
No 283
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.62 E-value=4.4e-07 Score=88.92 Aligned_cols=150 Identities=9% Similarity=0.037 Sum_probs=95.3
Q ss_pred ccCChHHHHHHHHHHHcc--CCCCCccCHHHHHHHHHHHhh------cCCCEEEEEcccccHHHHHHHHHCCC--CCEEE
Q 023411 79 NVREPEILRQLREETAGM--RGSQMQVSPDQAQLLAMLVQI------LGAQRCIEVGVYTGYSSLAIALVLPE--SGCLV 148 (282)
Q Consensus 79 ~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~ll~~l~~~------~~~~~VLEIG~G~G~~t~~la~~~~~--~~~v~ 148 (282)
....++..+.+.+..... ..+...+.+..+.++..++.. .++.+|+|.|||+|.+.+.++..++. ..+++
T Consensus 273 r~~~DdL~ell~eya~k~Rkk~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~Iy 352 (878)
T 3s1s_A 273 ILTGDELAELIHDIATRGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIW 352 (878)
T ss_dssp HCSSHHHHHHHHHHHTTSCCCCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEE
T ss_pred cCchHHHHHHHHHHHHHhCCcCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEE
Confidence 344455555544444222 234556778888888887321 24679999999999999999987741 35799
Q ss_pred EEecCccHHHHH--HHHHHHhCCCC---cEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc----------------
Q 023411 149 ACERDARSLEVA--KKYYERAGVSH---KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM---------------- 207 (282)
Q Consensus 149 ~iD~s~~~~~~a--~~~~~~~g~~~---~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~---------------- 207 (282)
|+|+++.+++.| +.++..+++.+ ...+...|..+..... .++||+|+.+++...
T Consensus 353 GvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~-----~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~ 427 (878)
T 3s1s_A 353 ANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPED-----FANVSVVVMNPPYVSGVTDPAIKRKFAHKII 427 (878)
T ss_dssp EECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGG-----GTTEEEEEECCBCCSSCCCHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccc-----cCCCCEEEECCCccccccchhhhhhHHHHhh
Confidence 999999999999 54444322221 1355555655421111 478999999876311
Q ss_pred ----------------cHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 208 ----------------YQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 208 ----------------~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
+..+++.+.++ |++||.+++ ++.++.
T Consensus 428 ~g~p~~p~s~~G~~DLy~aFIe~Al~l---LKpGGrLAf--IlP~s~ 469 (878)
T 3s1s_A 428 QLTGNRPQTLFGQIGVEALFLELVTEL---VQDGTVISA--IMPKQY 469 (878)
T ss_dssp HHHSSCCSSCSSSCCHHHHHHHHHHHH---SCTTCEEEE--EEETHH
T ss_pred hhccccccccccccchHHHHHHHHHHh---cCCCcEEEE--EEChHH
Confidence 12245666677 999998876 444443
No 284
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.57 E-value=2.2e-07 Score=80.63 Aligned_cols=83 Identities=12% Similarity=0.079 Sum_probs=67.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++..+||.+||.|..|..+++. +++|+|+|.++++++.|++ ++. ++++++++++.+....+...+ .++
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g-~~~ 89 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALG-VER 89 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTT-CSC
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcC-CCC
Confidence 4557789999999999999999986 5899999999999999998 643 589999999987654444333 368
Q ss_pred eeEEEEcCCccc
Q 023411 196 YDFAFVDAEKRM 207 (282)
Q Consensus 196 fDlV~id~~~~~ 207 (282)
+|.|+.|.+...
T Consensus 90 vDgIL~DLGvSS 101 (285)
T 1wg8_A 90 VDGILADLGVSS 101 (285)
T ss_dssp EEEEEEECSCCH
T ss_pred cCEEEeCCcccc
Confidence 999999977543
No 285
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.55 E-value=2.1e-08 Score=81.00 Aligned_cols=90 Identities=13% Similarity=0.119 Sum_probs=67.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||+|||. +++|+++.|++.|+++... +++++++|+.+.... ...+++|
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~---~~~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQS---AHKESSF 64 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGG---CCCSSCE
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccc---cCCCCCE
Confidence 35678999999985 2399999999999987532 389999998764210 0015789
Q ss_pred eEEEEcCCc----cccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 197 DFAFVDAEK----RMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 197 DlV~id~~~----~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|+|++.... .+....++.+.++ |||||.+++.+..
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~---LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARI---LRPGGCLFLKEPV 103 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHH---EEEEEEEEEEEEE
T ss_pred eEEEECChhhhcccCHHHHHHHHHHH---CCCCEEEEEEccc
Confidence 999986542 4557788999888 9999999996543
No 286
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.35 E-value=3.4e-07 Score=79.48 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=81.0
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
..+..+||+-+|||..++.+++. +.+++.||.++...+..++|++. .++++++++|+...+..+... ..+||
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~--~~~fd 161 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPP--PEKRG 161 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSC--TTSCE
T ss_pred hcCCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCC--CCCcc
Confidence 34567999999999999988872 47999999999999999998864 457999999998877765332 24799
Q ss_pred EEEEcCCcc---ccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 198 FAFVDAEKR---MYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 198 lV~id~~~~---~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+||+|++.+ .+...++.+.+ ..++.++|++++
T Consensus 162 LVfiDPPYe~k~~~~~vl~~L~~-~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 162 LIFIDPSYERKEEYKEIPYAIKN-AYSKFSTGLYCV 196 (283)
T ss_dssp EEEECCCCCSTTHHHHHHHHHHH-HHHHCTTSEEEE
T ss_pred EEEECCCCCCCcHHHHHHHHHHH-hCccCCCeEEEE
Confidence 999999865 35555555554 233778999887
No 287
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.33 E-value=2.2e-06 Score=76.08 Aligned_cols=86 Identities=23% Similarity=0.149 Sum_probs=68.8
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...++..++|..+|.|..|..+++.++++++|+|+|.++++++.++ .+ ..++++++++++.+....+...+-.++
T Consensus 54 ~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 54 NIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp CCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 3467789999999999999999999877899999999999999884 33 246899999999877665544332247
Q ss_pred eeEEEEcCCcc
Q 023411 196 YDFAFVDAEKR 206 (282)
Q Consensus 196 fDlV~id~~~~ 206 (282)
+|.|+.|-+..
T Consensus 129 vDgILfDLGVS 139 (347)
T 3tka_A 129 IDGILLDLGVS 139 (347)
T ss_dssp EEEEEEECSCC
T ss_pred ccEEEECCccC
Confidence 99999986533
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.33 E-value=2.2e-06 Score=66.93 Aligned_cols=85 Identities=15% Similarity=0.053 Sum_probs=60.5
Q ss_pred CCCEEEEEccccc-HHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 119 GAQRCIEVGVYTG-YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 119 ~~~~VLEIG~G~G-~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
++.+|||||||.| ..+.+|++.. +..|+++|++|..++ +++.|..+....+ -+.||
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~~-----Y~~~D 91 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRMEI-----YRGAA 91 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHHH-----HTTEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCcccc-----cCCcC
Confidence 4569999999999 5999999753 578999999998764 7888887643332 25899
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|+.-.++.+...++-.+.+- -|.-+++-
T Consensus 92 LIYsirPP~El~~~i~~lA~~-----v~adliI~ 120 (153)
T 2k4m_A 92 LIYSIRPPAEIHSSLMRVADA-----VGARLIIK 120 (153)
T ss_dssp EEEEESCCTTTHHHHHHHHHH-----HTCEEEEE
T ss_pred EEEEcCCCHHHHHHHHHHHHH-----cCCCEEEE
Confidence 997766656555555555443 34455554
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.99 E-value=2.7e-05 Score=73.94 Aligned_cols=104 Identities=8% Similarity=0.019 Sum_probs=80.5
Q ss_pred CCCCccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHHHCCC------------CCEEEEEecCccHHHHHHHHHH
Q 023411 98 GSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE------------SGCLVACERDARSLEVAKKYYE 165 (282)
Q Consensus 98 ~~~~~~~~~~~~ll~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~------------~~~v~~iD~s~~~~~~a~~~~~ 165 (282)
.+...+.+....++..++...++.+|+|-+||+|.+.+.+.+.+.. ...++|+|+++.....|+-++-
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 3456778888999999998888899999999999998887765432 2469999999999999999998
Q ss_pred HhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCC
Q 023411 166 RAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE 204 (282)
Q Consensus 166 ~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~ 204 (282)
.+|... ..+.++|...... ...++..+||+|+.+++
T Consensus 276 lhg~~~-~~I~~~dtL~~~~--~~~~~~~~fD~Il~NPP 311 (530)
T 3ufb_A 276 LHGLEY-PRIDPENSLRFPL--REMGDKDRVDVILTNPP 311 (530)
T ss_dssp HHTCSC-CEEECSCTTCSCG--GGCCGGGCBSEEEECCC
T ss_pred hcCCcc-ccccccccccCch--hhhcccccceEEEecCC
Confidence 888764 5778888764211 11111358999999876
No 290
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.97 E-value=9.1e-06 Score=70.07 Aligned_cols=105 Identities=14% Similarity=0.105 Sum_probs=63.4
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+..+|||+|||+|.++.+++...+ ...++++|+.-+....... ....+. ++..+.+++ +... + ..++|
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-~~~~g~--~ii~~~~~~-dv~~-l----~~~~~ 141 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-VQSLGW--NIITFKDKT-DIHR-L----EPVKC 141 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-CCBTTG--GGEEEECSC-CTTT-S----CCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-cCcCCC--CeEEEeccc-eehh-c----CCCCc
Confidence 45677999999999999999887543 3578888877442100000 000011 234455554 2211 1 15789
Q ss_pred eEEEEcCCcc----cc-----HHHHHHHHHhhcCCCCC-cEEEEeCCCC
Q 023411 197 DFAFVDAEKR----MY-----QEYFELLLQLLLQIRVG-GIIVIDNVLW 235 (282)
Q Consensus 197 DlV~id~~~~----~~-----~~~l~~~~~~~~~Lkpg-G~lv~dd~~~ 235 (282)
|+|++|..+. .. ...++.+.++ |+|| |.+|+ .++.
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~---LkpG~G~FV~-KVf~ 186 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKW---LACGVDNFCV-KVLA 186 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHH---HTTCCSEEEE-EESC
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHH---hCCCCCeEEE-EecC
Confidence 9999997533 11 1234556677 9999 99999 4554
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.88 E-value=2.9e-05 Score=69.91 Aligned_cols=84 Identities=8% Similarity=0.060 Sum_probs=59.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..++.+|||+||+.|++|..+++. +++|++||+.+-. .. +. ...+|+++++|+.+..+. .++|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~-~~----l~---~~~~V~~~~~d~~~~~~~------~~~~ 271 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA-QS----LM---DTGQVTWLREDGFKFRPT------RSNI 271 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC-HH----HH---TTTCEEEECSCTTTCCCC------SSCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC-hh----hc---cCCCeEEEeCccccccCC------CCCc
Confidence 357889999999999999999875 6899999986522 11 11 124699999998775431 4689
Q ss_pred eEEEEcCCccccHHHHHHHHHh
Q 023411 197 DFAFVDAEKRMYQEYFELLLQL 218 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~ 218 (282)
|+|++|.... .......+.+.
T Consensus 272 D~vvsDm~~~-p~~~~~l~~~w 292 (375)
T 4auk_A 272 SWMVCDMVEK-PAKVAALMAQW 292 (375)
T ss_dssp EEEEECCSSC-HHHHHHHHHHH
T ss_pred CEEEEcCCCC-hHHhHHHHHHH
Confidence 9999998743 23334444443
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.84 E-value=6.3e-06 Score=70.16 Aligned_cols=99 Identities=16% Similarity=0.154 Sum_probs=62.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHHH--CCC-CCEEEEEec--CccHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHHhC
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALV--LPE-SGCLVACER--DARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILN 190 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~--~~~-~~~v~~iD~--s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~l~~~ 190 (282)
..++.+|||+||+.|.|+.++++. +.. .+.++++|+ .|-.. . ..|+ +-++++++ |+.+..
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~------~-~~Gv-~~i~~~~G~Df~~~~------ 136 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM------Q-SYGW-NIVTMKSGVDVFYKP------ 136 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC------C-STTG-GGEEEECSCCGGGSC------
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc------c-CCCc-eEEEeeccCCccCCC------
Confidence 457889999999999999999986 321 255666662 22100 0 0111 12466667 987621
Q ss_pred CCCCceeEEEEcCCccc---------cHHHHHHHHHhhcCCCCCc-EEEEeCCCC
Q 023411 191 GEASSYDFAFVDAEKRM---------YQEYFELLLQLLLQIRVGG-IIVIDNVLW 235 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~---------~~~~l~~~~~~~~~LkpgG-~lv~dd~~~ 235 (282)
..++|+|++|..+.. ....++.+.++ |+||| .+++. ++-
T Consensus 137 --~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~---Lk~gG~~FvvK-VFq 185 (269)
T 2px2_A 137 --SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDW---LSRGPKEFCIK-ILC 185 (269)
T ss_dssp --CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH---HTTCCSEEEEE-ESC
T ss_pred --CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHH---hhcCCcEEEEE-ECC
Confidence 358999999975321 11245666666 99999 88884 443
No 293
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.81 E-value=4.8e-06 Score=71.89 Aligned_cols=102 Identities=14% Similarity=0.059 Sum_probs=62.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+..+|||+|||.|.++.+++...+ ...|+++|+.......+.. ....+ .++.....+. +.. .+ ..+++
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~-~~~~g--~~ii~~~~~~-dv~-~l----~~~~~ 157 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIM-RTTLG--WNLIRFKDKT-DVF-NM----EVIPG 157 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTT--GGGEEEECSC-CGG-GS----CCCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCccccccc-cccCC--CceEEeeCCc-chh-hc----CCCCc
Confidence 45777999999999999999987554 4578999997653211110 00011 1223333222 111 11 15799
Q ss_pred eEEEEcCCcc----c-----cHHHHHHHHHhhcCCCCC--cEEEEe
Q 023411 197 DFAFVDAEKR----M-----YQEYFELLLQLLLQIRVG--GIIVID 231 (282)
Q Consensus 197 DlV~id~~~~----~-----~~~~l~~~~~~~~~Lkpg--G~lv~d 231 (282)
|+|++|..+. . ....++.+..+ |+|| |.+|+.
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~---Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQW---LQEGNYTEFCIK 200 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHH---HHHHCCCEEEEE
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHH---cCCCCCCcEEEE
Confidence 9999997643 1 11245555666 9999 999995
No 294
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.74 E-value=8.6e-05 Score=66.73 Aligned_cols=59 Identities=8% Similarity=-0.010 Sum_probs=49.9
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (282)
...|||||.|.|.+|..++.... ..+|++||+++..+...++.+ . .++++++++|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 47999999999999999998642 368999999999998888766 2 35799999999875
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.63 E-value=0.00013 Score=61.38 Aligned_cols=106 Identities=15% Similarity=0.051 Sum_probs=67.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHHhCCCCC
Q 023411 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEAS 194 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~l~~~~~~~ 194 (282)
...+..+|+|+||++|.++.+++...+ ..+|+|+|+-..-.+. -..++..|. +.++|+.+ |..... ..
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv~~~~--------~~ 143 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDVFYLP--------PE 143 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCGGGCC--------CC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccceeecC--------Cc
Confidence 345778999999999999999887654 3479999986542210 001122333 35999999 864321 46
Q ss_pred ceeEEEEcCCcccc---------HHHHHHHHHhhcCCCCCcEEEEeCCCCCC
Q 023411 195 SYDFAFVDAEKRMY---------QEYFELLLQLLLQIRVGGIIVIDNVLWHG 237 (282)
Q Consensus 195 ~fDlV~id~~~~~~---------~~~l~~~~~~~~~LkpgG~lv~dd~~~~g 237 (282)
++|.|+||...... ...++.+.+ ||++ |-+++ -++-+.
T Consensus 144 ~~DtllcDIgeSs~~~~vE~~RtlrvLela~~---wL~~-~~fc~-KVl~py 190 (267)
T 3p8z_A 144 KCDTLLCDIGESSPSPTVEESRTIRVLKMVEP---WLKN-NQFCI-KVLNPY 190 (267)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHGG---GCSS-CEEEE-EESCCC
T ss_pred cccEEEEecCCCCCChhhhhhHHHHHHHHHHH---hccc-CCEEE-EEccCC
Confidence 79999999763321 123344444 4988 67777 354443
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.62 E-value=0.00026 Score=62.03 Aligned_cols=51 Identities=18% Similarity=0.090 Sum_probs=43.7
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH 171 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~ 171 (282)
.++..|||++||+|..++.++.. +.+++|+|+++++++.|+++++......
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~~~ 284 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVPGF 284 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTC
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhcccc
Confidence 57789999999999999988764 4699999999999999999998764433
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.61 E-value=0.00016 Score=62.77 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=65.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHHhCCCCCc
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEASS 195 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~l~~~~~~~~ 195 (282)
..+..+|||+||++|.++.+++...+ ..+|+|+|+-..-.+. -..++..+. +-|.++.+ |+.... ..+
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~-P~~~~ql~w-~lV~~~~~~Dv~~l~--------~~~ 160 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEE-PQLVQSYGW-NIVTMKSGVDVFYRP--------SEC 160 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCC-CCCCCBTTG-GGEEEECSCCTTSSC--------CCC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccC-cchhhhcCC-cceEEEeccCHhhCC--------CCC
Confidence 45777999999999999998887543 3479999986541100 000011122 23888887 764332 367
Q ss_pred eeEEEEcCCccc---------cHHHHHHHHHhhcCCCCC-cEEEEeCCC
Q 023411 196 YDFAFVDAEKRM---------YQEYFELLLQLLLQIRVG-GIIVIDNVL 234 (282)
Q Consensus 196 fDlV~id~~~~~---------~~~~l~~~~~~~~~Lkpg-G~lv~dd~~ 234 (282)
+|+|+||..... ....++.+.+. |++| |-+++. ++
T Consensus 161 ~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~w---L~~~~~~f~~K-Vl 205 (321)
T 3lkz_A 161 CDTLLCDIGESSSSAEVEEHRTIRVLEMVEDW---LHRGPREFCVK-VL 205 (321)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH---HTTCCCEEEEE-ES
T ss_pred CCEEEEECccCCCChhhhhhHHHHHHHHHHHH---hccCCCcEEEE-Ec
Confidence 999999976221 22245555565 9988 888883 44
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.58 E-value=0.00058 Score=59.33 Aligned_cols=101 Identities=14% Similarity=0.072 Sum_probs=61.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHHhCCCCCc
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEASS 195 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~l~~~~~~~~ 195 (282)
..++.+|||+||++|.|+.++++..+ -..|+++|+.......... ....+. +-+.+..+ |..+ + ..++
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~----l----~~~~ 147 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFT----M----PTEP 147 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTT----S----CCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccccCC-ceEEeecCceeee----c----CCCC
Confidence 34678999999999999999997643 3578999987532100000 000000 11333322 2221 1 1478
Q ss_pred eeEEEEcCCcc----c-----cHHHHHHHHHhhcCCCCC-cEEEEe
Q 023411 196 YDFAFVDAEKR----M-----YQEYFELLLQLLLQIRVG-GIIVID 231 (282)
Q Consensus 196 fDlV~id~~~~----~-----~~~~l~~~~~~~~~Lkpg-G~lv~d 231 (282)
+|+|++|..+. . ....++.+..+ |+|| |.+|+.
T Consensus 148 ~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~---LkpG~G~FV~K 190 (300)
T 3eld_A 148 SDTLLCDIGESSSNPLVERDRTMKVLENFERW---KHVNTENFCVK 190 (300)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHH---CCTTCCEEEEE
T ss_pred cCEEeecCcCCCCCHHHHHHHHHHHHHHHHHH---hcCCCCcEEEE
Confidence 99999997644 1 12345556676 9999 999996
No 299
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.50 E-value=0.00011 Score=71.97 Aligned_cols=110 Identities=16% Similarity=0.135 Sum_probs=74.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-------CC----CCEEEEEecCccHHHHHHHH--------------HHHh-----C
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-------PE----SGCLVACERDARSLEVAKKY--------------YERA-----G 168 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-------~~----~~~v~~iD~s~~~~~~a~~~--------------~~~~-----g 168 (282)
+.-+|+|+|.|+|++.+.+.+.+ |. ..+++++|..|-..+..++. ++.. |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34589999999999988877653 11 15799999977544444432 2221 1
Q ss_pred -----CC---CcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc------cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 169 -----VS---HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM------YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 169 -----~~---~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~------~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+. -.++++.||+.+.++.+.... ...+|.+|+|+.... ...++..+.++ ++|||.+....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~-~~~~da~flD~f~p~~np~~w~~~~~~~l~~~---~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSL-NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARM---TRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGG-TTCEEEEEECSSCC--CCTTCSHHHHHHHHHH---EEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhccccc-CCceeEEEECCCCCCCChhhhhHHHHHHHHHH---hCCCCEEEecc
Confidence 11 157888999998877652110 268999999986333 36788888888 99999887643
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.47 E-value=0.00052 Score=60.27 Aligned_cols=136 Identities=19% Similarity=0.177 Sum_probs=80.8
Q ss_pred CCEEEEEcccccHHHHHHHHH---CCCCC--EEEEEecCc--------c-HHHHHHHHHHHhC--CCC--cEEEEEcchh
Q 023411 120 AQRCIEVGVYTGYSSLAIALV---LPESG--CLVACERDA--------R-SLEVAKKYYERAG--VSH--KVKIKHGLAA 181 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~---~~~~~--~v~~iD~s~--------~-~~~~a~~~~~~~g--~~~--~v~~~~gd~~ 181 (282)
.-+|+|+|-|+|...+..... ..+.. +++++|..+ + ..+.......... ... .+++..||+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 348999999999986543322 12244 567888533 1 2222333333211 012 3567889998
Q ss_pred hHHHHHHhCCCCCceeEEEEcCC-----ccc-cHHHHHHHHHhhcCCCCCcEEEEeCCCCCCcccCCcCCChhhHHHHHH
Q 023411 182 DSLKALILNGEASSYDFAFVDAE-----KRM-YQEYFELLLQLLLQIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNF 255 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~-----~~~-~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~ 255 (282)
+.++.+. ...+|+||.|+- ++. ..++++.+.++ ++|||+++--.+ .| .+|.-
T Consensus 177 ~~l~~l~----~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~---~~pgg~laTYta--ag-------------~VRR~ 234 (308)
T 3vyw_A 177 KRIKEVE----NFKADAVFHDAFSPYKNPELWTLDFLSLIKER---IDEKGYWVSYSS--SL-------------SVRKS 234 (308)
T ss_dssp HHGGGCC----SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTT---EEEEEEEEESCC--CH-------------HHHHH
T ss_pred HHHhhhc----ccceeEEEeCCCCcccCcccCCHHHHHHHHHH---hCCCcEEEEEeC--cH-------------HHHHH
Confidence 8777651 358999999975 122 35578888887 999999875221 12 23332
Q ss_pred HHHhhhCCCeEEEEee-cC--CceEEEEE
Q 023411 256 NKNLMEDERVSISMVP-IG--DGMTICQK 281 (282)
Q Consensus 256 ~~~~~~~~~~~~~~lp-~~--~Gl~~~~k 281 (282)
+ ..-+|++.-.| +| -.|++|++
T Consensus 235 L----~~aGF~V~k~~G~g~KReml~A~~ 259 (308)
T 3vyw_A 235 L----LTLGFKVGSSREIGRKRKGTVASL 259 (308)
T ss_dssp H----HHTTCEEEEEECC---CEEEEEES
T ss_pred H----HHCCCEEEecCCCCCCCceeEEec
Confidence 2 34588888777 32 35666653
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.42 E-value=0.00036 Score=60.46 Aligned_cols=93 Identities=18% Similarity=0.214 Sum_probs=62.4
Q ss_pred CCCEEEEEcc------cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 119 GAQRCIEVGV------YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 119 ~~~~VLEIG~------G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
.+.+|||+|+ ..|.+ .+.+..|.++.|+++|+.+-.. ..+ .+++||..+...
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da~--~~IqGD~~~~~~------- 166 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DAD--STLIGDCATVHT------- 166 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SSS--EEEESCGGGEEE-------
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CCC--eEEEcccccccc-------
Confidence 4679999996 66763 3444556457999999987531 112 559999754211
Q ss_pred CCceeEEEEcCCcc--------c------cHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 193 ASSYDFAFVDAEKR--------M------YQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 193 ~~~fDlV~id~~~~--------~------~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
.++||+|+.|..+. + ....++.+.+. |+|||.+++. ++.|.
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~---LkpGGsFvVK--VFQGs 221 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQK---LALGGSIAVK--ITEHS 221 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHH---EEEEEEEEEE--ECSSS
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHh---CcCCCEEEEE--EecCC
Confidence 48999999985421 1 23345666777 9999999997 44454
No 302
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.08 E-value=0.0012 Score=60.45 Aligned_cols=61 Identities=11% Similarity=0.152 Sum_probs=48.8
Q ss_pred hcCCCEEEEEcccccHHHHHHH-HHCCCCCEEEEEecCccHHHHHHHHHHH--hCCC-CcEEEEE
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIA-LVLPESGCLVACERDARSLEVAKKYYER--AGVS-HKVKIKH 177 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la-~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~~-~~v~~~~ 177 (282)
..++..|+|||++.|.+++.++ +..++.++|+++|++|...+..+++++. ++.. ++++++.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~ 288 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHG 288 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEE
Confidence 3577899999999999999988 5555448999999999999999999987 3222 4565554
No 303
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.98 E-value=0.0037 Score=56.54 Aligned_cols=37 Identities=11% Similarity=0.197 Sum_probs=26.7
Q ss_pred CCEEEEEcccccHHHHHHHHHC--------------CCCCEEEEEecCccH
Q 023411 120 AQRCIEVGVYTGYSSLAIALVL--------------PESGCLVACERDARS 156 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~--------------~~~~~v~~iD~s~~~ 156 (282)
+.+|+|+||++|..|+.+...+ ++..+|+.-|+...-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ND 103 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSND 103 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccc
Confidence 5689999999999998873321 235678888875543
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.89 E-value=0.0019 Score=55.25 Aligned_cols=48 Identities=8% Similarity=0.149 Sum_probs=40.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG 168 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g 168 (282)
.++..|||..||+|..++.+.+. +-+++++|+++..++.++++++.++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 57789999999999998887764 4699999999999999999998655
No 305
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.88 E-value=0.0036 Score=60.85 Aligned_cols=108 Identities=19% Similarity=0.204 Sum_probs=70.5
Q ss_pred CEEEEEcccccHHHHHHHHHC-------CC----CCEEEEEec---CccHHHH-----------HHHHHHHhCC------
Q 023411 121 QRCIEVGVYTGYSSLAIALVL-------PE----SGCLVACER---DARSLEV-----------AKKYYERAGV------ 169 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~-------~~----~~~v~~iD~---s~~~~~~-----------a~~~~~~~g~------ 169 (282)
-+|+|+|-|+|...+...+.+ |. .-+++++|. +++.+.. +++..+....
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999987766653 11 146999998 4443332 2222222211
Q ss_pred -------CCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCc-----cc-cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 170 -------SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----RM-YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 170 -------~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~-----~~-~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.-.+++..||+.+.++.+.... ...||.+|.|+.. +. ..+++..+.++ ++|||.+....
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~-~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~---~~~g~~~~t~~ 219 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSL-NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARL---ARPGGTLATFT 219 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGG-TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHH---EEEEEEEEESC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhccccc-CCcccEEEECCCCCcCChhhhhHHHHHHHHHH---hCCCCEEEecc
Confidence 1235678899988777652111 3679999999762 22 45678888888 99999987644
No 306
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.79 E-value=0.0047 Score=54.74 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=67.6
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
...++++||-+|+|. |..+..+++.. +++|+++|.+++..+.+++ .|.+.-+.....+..+.+... .+
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~-----~g 231 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKE-----IG 231 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH-----HS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHh-----CC
Confidence 456788999999875 88888899887 4799999999988776654 454321111112222222221 24
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.+|.||..... ...++.+.++ |+++|.++.-..
T Consensus 232 ~~d~vid~~g~---~~~~~~~~~~---l~~~G~iv~~G~ 264 (340)
T 3s2e_A 232 GAHGVLVTAVS---PKAFSQAIGM---VRRGGTIALNGL 264 (340)
T ss_dssp SEEEEEESSCC---HHHHHHHHHH---EEEEEEEEECSC
T ss_pred CCCEEEEeCCC---HHHHHHHHHH---hccCCEEEEeCC
Confidence 79999876542 3456778888 999999987543
No 307
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.79 E-value=0.0018 Score=58.68 Aligned_cols=77 Identities=8% Similarity=-0.016 Sum_probs=44.6
Q ss_pred CCEEEEEcccccHHHHHHHHH-------------C---CCCCEEEEEecC-----------ccHHHHHHHHHHHhCCCCc
Q 023411 120 AQRCIEVGVYTGYSSLAIALV-------------L---PESGCLVACERD-----------ARSLEVAKKYYERAGVSHK 172 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~-------------~---~~~~~v~~iD~s-----------~~~~~~a~~~~~~~g~~~~ 172 (282)
.-+|+|+||++|..|+.+... . ++..+|+.-|+. +.+.+.. -+..|....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~---~~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNL---EKENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHH---HHHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhh---hhhccCCCC
Confidence 468999999999999988776 1 124578888875 2222221 112232122
Q ss_pred EEEEEcchhhHHHHHHhCCCCCceeEEEEc
Q 023411 173 VKIKHGLAADSLKALILNGEASSYDFAFVD 202 (282)
Q Consensus 173 v~~~~gd~~~~l~~l~~~~~~~~fDlV~id 202 (282)
..|+.|..-.+...+. ..+++|+|+..
T Consensus 130 ~~f~~gvpgSFy~rlf---p~~S~d~v~Ss 156 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLF---PEESMHFLHSC 156 (384)
T ss_dssp SEEEEECCSCTTSCCS---CTTCEEEEEEE
T ss_pred ceEEEecchhhhhccC---CCCceEEEEec
Confidence 3566554433221111 15899999975
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.78 E-value=0.0019 Score=57.80 Aligned_cols=75 Identities=13% Similarity=0.053 Sum_probs=54.8
Q ss_pred CEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~ 200 (282)
.+|+|+.||.|.+++.+.++--+-..++++|+++.+++..+.|+.. ..++++|+.+....... ...+|+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~---~~~~D~l~ 73 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFD---RLSFDMIL 73 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHH---HHCCSEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcC---cCCcCEEE
Confidence 4899999999999999987631012699999999999888887642 35678888775432110 12689999
Q ss_pred EcCC
Q 023411 201 VDAE 204 (282)
Q Consensus 201 id~~ 204 (282)
.+.+
T Consensus 74 ~gpP 77 (343)
T 1g55_A 74 MSPP 77 (343)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8765
No 309
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.74 E-value=0.0035 Score=56.28 Aligned_cols=102 Identities=21% Similarity=0.276 Sum_probs=65.9
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|.+.-+.....+..+.+..+. .
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~~~~----~ 256 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCG--ASIIIAVDIVESRLELAKQ----LGATHVINSKTQDPVAAIKEIT----D 256 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHT--CSEEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHH----cCCCEEecCCccCHHHHHHHhc----C
Confidence 456788999999875 777888888764 5 79999999988877754 3433111111112222222221 2
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+.+|+||-.... ...++...++ |+++|.++.=..
T Consensus 257 gg~D~vid~~g~---~~~~~~~~~~---l~~~G~iv~~G~ 290 (371)
T 1f8f_A 257 GGVNFALESTGS---PEILKQGVDA---LGILGKIAVVGA 290 (371)
T ss_dssp SCEEEEEECSCC---HHHHHHHHHT---EEEEEEEEECCC
T ss_pred CCCcEEEECCCC---HHHHHHHHHH---HhcCCEEEEeCC
Confidence 479999865542 2346777788 999999987443
No 310
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.67 E-value=0.0061 Score=55.15 Aligned_cols=101 Identities=13% Similarity=0.028 Sum_probs=68.0
Q ss_pred CEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH-HHhC-CCCCceeE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA-LILN-GEASSYDF 198 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~-l~~~-~~~~~fDl 198 (282)
.+|+|+.||.|.+++-+.++- -..+.++|+++.+.+..+.|+. ...++++|+.+.... +... .....+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 489999999999999988762 1347799999998887777653 367888998775322 2100 01368999
Q ss_pred EEEcCCccc----------------cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 199 AFVDAEKRM----------------YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 199 V~id~~~~~----------------~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
|+.+.+... +..+++.+.. ++|. +++++||-
T Consensus 75 i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~----~~P~-~~v~ENV~ 121 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSE----LQPL-FFLAENVP 121 (376)
T ss_dssp EEECCCCCTTC-------CHHHHHHHHHHHHHHHH----HCCS-EEEEEECT
T ss_pred EEecCCCCCcccccCCCCCCchHHHHHHHHHHHHH----hCCC-EEEEecch
Confidence 998766211 2223333333 6885 88899984
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.65 E-value=0.0046 Score=56.17 Aligned_cols=107 Identities=16% Similarity=0.289 Sum_probs=68.3
Q ss_pred HHhhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch-hhHHHHHHhC
Q 023411 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA-ADSLKALILN 190 (282)
Q Consensus 114 l~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~-~~~l~~l~~~ 190 (282)
.+...++++||-+|+|. |..+..+++..+ + +|+++|.+++.++.+++ .|. +-+.....+. .+.+..+.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~~~~~~-- 250 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLG--AACVIVGDQNPERLKLLSD----AGF-ETIDLRNSAPLRDQIDQIL-- 250 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHT--CSEEEEEESCHHHHHHHHT----TTC-EEEETTSSSCHHHHHHHHH--
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHH----cCC-cEEcCCCcchHHHHHHHHh--
Confidence 44566889999999876 778888888764 5 99999999988776653 343 1111111222 22233222
Q ss_pred CCCCceeEEEEcCCccc-----------cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 191 GEASSYDFAFVDAEKRM-----------YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~-----------~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
....+|+||-...... ....++.+.++ |++||.+++=..
T Consensus 251 -~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~---l~~gG~iv~~G~ 300 (398)
T 2dph_A 251 -GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDV---VRAGGAIGIPGI 300 (398)
T ss_dssp -SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHH---EEEEEEEECCSC
T ss_pred -CCCCCCEEEECCCCccccccccccccccHHHHHHHHHH---HhcCCEEEEecc
Confidence 1237999986554321 12357778888 999999876433
No 312
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.65 E-value=0.0026 Score=51.68 Aligned_cols=100 Identities=13% Similarity=0.177 Sum_probs=60.6
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||.+|+ |.|..+..++... +++|+++|.+++..+.+++ .|.. . .+..+..+....+......
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~-~~d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGVE--Y-VGDSRSVDFADEILELTDG 105 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCCS--E-EEETTCSTHHHHHHHHTTT
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC--E-EeeCCcHHHHHHHHHHhCC
Confidence 3456789999994 4566666666654 4799999999877655543 3432 1 1221111222222211112
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
..+|++|..... ..++.+.++ |++||.++.=
T Consensus 106 ~~~D~vi~~~g~----~~~~~~~~~---l~~~G~~v~~ 136 (198)
T 1pqw_A 106 YGVDVVLNSLAG----EAIQRGVQI---LAPGGRFIEL 136 (198)
T ss_dssp CCEEEEEECCCT----HHHHHHHHT---EEEEEEEEEC
T ss_pred CCCeEEEECCch----HHHHHHHHH---hccCCEEEEE
Confidence 479999976542 356777777 9999998874
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.64 E-value=0.011 Score=52.74 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=67.1
Q ss_pred HHhhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc---hhhHHHHHH
Q 023411 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGL---AADSLKALI 188 (282)
Q Consensus 114 l~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd---~~~~l~~l~ 188 (282)
.+...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|.+ .++..+ ..+....+.
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMG--AAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVE 236 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHH
Confidence 34566788999999875 777888888764 5 89999999987776653 4543 222222 123222222
Q ss_pred hCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 189 LNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
... ...+|+||-..... ..++...++ |++||.++.=.
T Consensus 237 ~~~-~~g~D~vid~~g~~---~~~~~~~~~---l~~~G~iv~~G 273 (356)
T 1pl8_A 237 GQL-GCKPEVTIECTGAE---ASIQAGIYA---TRSGGTLVLVG 273 (356)
T ss_dssp HHH-TSCCSEEEECSCCH---HHHHHHHHH---SCTTCEEEECS
T ss_pred HHh-CCCCCEEEECCCCh---HHHHHHHHH---hcCCCEEEEEe
Confidence 111 25799998655432 346677788 99999998743
No 314
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.53 E-value=0.0014 Score=72.47 Aligned_cols=103 Identities=16% Similarity=0.142 Sum_probs=57.1
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCC----CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPE----SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~----~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
+..+|||||.|+|..+..+...+.. ..+++..|+++.+.+.+++.++... ++...-|..+..+. ..+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~~~~-----~~~ 1310 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANPAPG-----SLG 1310 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCCCC---------
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----cccccccccccccC-----CCC
Confidence 4569999999999988887777642 1379999999999888888876532 22211121110000 146
Q ss_pred ceeEEEEcCCccc---cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 195 SYDFAFVDAEKRM---YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 195 ~fDlV~id~~~~~---~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+||+|+.....+. ....+..++++ |+|||.+++...
T Consensus 1311 ~ydlvia~~vl~~t~~~~~~l~~~~~l---L~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPAVAVGNMAAT---LKEGGFLLLHTL 1349 (2512)
T ss_dssp -CCEEEEECC-----------------------CCEEEEEEC
T ss_pred ceeEEEEcccccccccHHHHHHHHHHh---cCCCcEEEEEec
Confidence 7999998766443 34456666666 999999988754
No 315
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.46 E-value=0.0006 Score=61.34 Aligned_cols=80 Identities=9% Similarity=0.051 Sum_probs=47.5
Q ss_pred CCEEEEEcccccHHHHHHHHH---------------CCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH
Q 023411 120 AQRCIEVGVYTGYSSLAIALV---------------LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 184 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~---------------~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l 184 (282)
+-+|+|+||++|..|+.+... -++..+|+.-|+.......+-+.+.......+..|+.|..-.+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 347999999999998876654 23356899999877766555444432110012345544332211
Q ss_pred HHHHhCCCCCceeEEEEc
Q 023411 185 KALILNGEASSYDFAFVD 202 (282)
Q Consensus 185 ~~l~~~~~~~~fDlV~id 202 (282)
..+. ..+++|+||..
T Consensus 132 ~rlf---p~~S~d~v~Ss 146 (359)
T 1m6e_X 132 GRLF---PRNTLHFIHSS 146 (359)
T ss_dssp SCCS---CTTCBSCEEEE
T ss_pred hccC---CCCceEEEEeh
Confidence 1111 15899999975
No 316
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.35 E-value=0.012 Score=52.12 Aligned_cols=95 Identities=15% Similarity=0.137 Sum_probs=65.5
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
..+++|+.||.|..++.+.++- -..+.++|+++.+++..+.|+... . ++|+.+..+.. -..+|+|
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~-----~~~~D~l 75 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKT-----IPDHDIL 75 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGG-----SCCCSEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhh-----CCCCCEE
Confidence 4589999999999999988752 235889999999998888887421 1 67877653322 2468999
Q ss_pred EEcCCc------------cc-----cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 200 FVDAEK------------RM-----YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 200 ~id~~~------------~~-----~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
+.+.+. .+ +..+++.+.. ++|. +++++||-
T Consensus 76 ~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~----~~P~-~~~~ENV~ 122 (327)
T 2c7p_A 76 CAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE----KKPK-VVFMENVK 122 (327)
T ss_dssp EEECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHH----HCCS-EEEEEEEG
T ss_pred EECCCCCCcchhcccCCCcchhhHHHHHHHHHHHh----ccCc-EEEEeCcH
Confidence 986431 01 2334444433 6886 88999984
No 317
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.26 E-value=0.023 Score=50.66 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=68.9
Q ss_pred HHhhcCCCEEEEEcccc-cHHHHHHHHHCCCCCE-EEEEecCccHHHHHHHHHHHhCCCCcEEEEEc--chhhHHHHHHh
Q 023411 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESGC-LVACERDARSLEVAKKYYERAGVSHKVKIKHG--LAADSLKALIL 189 (282)
Q Consensus 114 l~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~-v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g--d~~~~l~~l~~ 189 (282)
.+...++++||-+|+|. |..++.+++..+ ++ |+++|.+++..+.+++. . ..-+.+... +..+....+..
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l-~----~~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAG--ACPLVITDIDEGRLKFAKEI-C----PEVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEEESCHHHHHHHHHH-C----TTCEEEECCSCCHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHh-c----hhcccccccccchHHHHHHHHH
Confidence 34566788999999864 777888888764 55 99999999998888765 2 122333211 12223233322
Q ss_pred CCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 190 NGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
......+|+||-..... ..++.+.++ |++||.+++=.
T Consensus 247 ~t~g~g~Dvvid~~g~~---~~~~~~~~~---l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTGVE---SSIAAAIWA---VKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSCCH---HHHHHHHHH---SCTTCEEEECC
T ss_pred HhCCCCCCEEEECCCCh---HHHHHHHHH---hcCCCEEEEEc
Confidence 21235899998655422 346777788 99999998744
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.22 E-value=0.0087 Score=53.79 Aligned_cols=106 Identities=20% Similarity=0.188 Sum_probs=68.4
Q ss_pred HHHhhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHh--
Q 023411 113 MLVQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL-- 189 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~-- 189 (282)
..+...++++||-+|+|. |..++.+++..+ ..+|+++|.+++..+.+++ .|... ++.....+....+..
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~i~~~~ 247 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATA---TVDPSAGDVVEAIAGPV 247 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSE---EECTTSSCHHHHHHSTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCE---EECCCCcCHHHHHHhhh
Confidence 344566788999999874 777788888764 2399999999988776655 45432 222112222233322
Q ss_pred -CCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 190 -NGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 190 -~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.. .+.+|+||-.... ...++.+.++ |++||.+++=..
T Consensus 248 ~~~-~gg~Dvvid~~G~---~~~~~~~~~~---l~~~G~vv~~G~ 285 (370)
T 4ej6_A 248 GLV-PGGVDVVIECAGV---AETVKQSTRL---AKAGGTVVILGV 285 (370)
T ss_dssp SSS-TTCEEEEEECSCC---HHHHHHHHHH---EEEEEEEEECSC
T ss_pred hcc-CCCCCEEEECCCC---HHHHHHHHHH---hccCCEEEEEec
Confidence 11 2489999865442 2456778888 999999988543
No 319
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.20 E-value=0.11 Score=45.46 Aligned_cols=110 Identities=13% Similarity=0.094 Sum_probs=71.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCC--CCcEEEEEcchhh-HHHHHHhCC-CCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV--SHKVKIKHGLAAD-SLKALILNG-EAS 194 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~v~~~~gd~~~-~l~~l~~~~-~~~ 194 (282)
..+.||++|||.=.....+. .+++.+++-|| .|+.++..++.+...+. ..+..++.+|..+ +...+...+ +.+
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 45689999997654433222 24357999999 59999999999986543 4578899999876 333333322 223
Q ss_pred ceeEEEEcCCc-----cccHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 195 SYDFAFVDAEK-----RMYQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 195 ~fDlV~id~~~-----~~~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
..=++++.+.. +.....++.+... +.||+.|+++.+.
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~---~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGL---SAVGSRIAVETSP 220 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHT---CCTTCEEEEECCC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHh---CCCCeEEEEEecC
Confidence 33455555552 2334456666665 8899999998764
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.19 E-value=0.034 Score=49.37 Aligned_cols=107 Identities=17% Similarity=0.222 Sum_probs=65.9
Q ss_pred HHhhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEE-cchhhHHHHHHhCC
Q 023411 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH-GLAADSLKALILNG 191 (282)
Q Consensus 114 l~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~-gd~~~~l~~l~~~~ 191 (282)
.+...++++||-+|+|. |..+..+++.. +++|+++|.+++..+.+++ .|.+.-+.... .+..+.+.......
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHhccc
Confidence 34566788999999864 67778888876 4789999999988777653 45432111110 22222222221100
Q ss_pred CCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 192 EASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 192 ~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
....+|+||-..... ..++...++ |+++|.++.=.
T Consensus 237 ~g~g~D~vid~~g~~---~~~~~~~~~---l~~~G~iv~~G 271 (352)
T 1e3j_A 237 IGDLPNVTIDCSGNE---KCITIGINI---TRTGGTLMLVG 271 (352)
T ss_dssp SSSCCSEEEECSCCH---HHHHHHHHH---SCTTCEEEECS
T ss_pred cCCCCCEEEECCCCH---HHHHHHHHH---HhcCCEEEEEe
Confidence 014699998655432 346677788 99999988743
No 321
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.16 E-value=0.017 Score=51.62 Aligned_cols=101 Identities=10% Similarity=0.090 Sum_probs=65.8
Q ss_pred HHhhcCCCEEEEEc--ccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCC
Q 023411 114 LVQILGAQRCIEVG--VYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG 191 (282)
Q Consensus 114 l~~~~~~~~VLEIG--~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~ 191 (282)
.....++++||-+| .|.|..+..+++.. +++|++++.+++..+.+++ .|.. .++..+..+....+....
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHC
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHhc
Confidence 34556788999999 45688888888876 4799999999887776654 3433 122221112222221111
Q ss_pred CCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 192 EASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 192 ~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
...+|+||-.... ..++.+.++ |+++|.++.=
T Consensus 229 -~~g~D~vid~~g~----~~~~~~~~~---l~~~G~iv~~ 260 (362)
T 2c0c_A 229 -PEGVDVVYESVGG----AMFDLAVDA---LATKGRLIVI 260 (362)
T ss_dssp -TTCEEEEEECSCT----HHHHHHHHH---EEEEEEEEEC
T ss_pred -CCCCCEEEECCCH----HHHHHHHHH---HhcCCEEEEE
Confidence 3579999876553 356777788 9999988874
No 322
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.15 E-value=0.023 Score=50.92 Aligned_cols=98 Identities=15% Similarity=0.211 Sum_probs=64.5
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc-----chhhHHHHHH
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHG-----LAADSLKALI 188 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-----d~~~~l~~l~ 188 (282)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++.++.+++ .|.. .++.. +..+.+..+.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~ 259 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAG--AKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKMT 259 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHHh
Confidence 445778999999864 667788888764 5 89999999998887654 3543 12211 1222222221
Q ss_pred hCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCC-cEEEEeC
Q 023411 189 LNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVG-GIIVIDN 232 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkpg-G~lv~dd 232 (282)
.+.+|+||-.... ...++.+.++ |+++ |.++.-.
T Consensus 260 ----~~g~D~vid~~g~---~~~~~~~~~~---l~~~~G~iv~~G 294 (374)
T 1cdo_A 260 ----NGGVDFSLECVGN---VGVMRNALES---CLKGWGVSVLVG 294 (374)
T ss_dssp ----TSCBSEEEECSCC---HHHHHHHHHT---BCTTTCEEEECS
T ss_pred ----CCCCCEEEECCCC---HHHHHHHHHH---hhcCCcEEEEEc
Confidence 2479999865443 2346677788 9999 9988743
No 323
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.08 E-value=0.024 Score=50.82 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=64.9
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEE--cchhhHHHHHHhCC
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH--GLAADSLKALILNG 191 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~--gd~~~~l~~l~~~~ 191 (282)
...++++||-+|+|. |..++.+++..+ + +|+++|.+++..+.+++ .|...-+.... .+..+.+..+.
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~v~~~~--- 262 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAG--ASRIIAIDINGEKFPKAKA----LGATDCLNPRELDKPVQDVITELT--- 262 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHH---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHH----hCCcEEEccccccchHHHHHHHHh---
Confidence 445778999999863 677788888764 5 89999999998877654 35431111100 12222222222
Q ss_pred CCCceeEEEEcCCccccHHHHHHHHHhhcCCCCC-cEEEEeCC
Q 023411 192 EASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVG-GIIVIDNV 233 (282)
Q Consensus 192 ~~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkpg-G~lv~dd~ 233 (282)
.+.+|+||-.... ...++.+.++ |+++ |.+++-..
T Consensus 263 -~~g~Dvvid~~G~---~~~~~~~~~~---l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 263 -AGGVDYSLDCAGT---AQTLKAAVDC---TVLGWGSCTVVGA 298 (376)
T ss_dssp -TSCBSEEEESSCC---HHHHHHHHHT---BCTTTCEEEECCC
T ss_pred -CCCccEEEECCCC---HHHHHHHHHH---hhcCCCEEEEECC
Confidence 2479999865442 2346677788 9999 99887443
No 324
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.08 E-value=0.031 Score=50.54 Aligned_cols=107 Identities=19% Similarity=0.204 Sum_probs=67.6
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc-hhhHHHHHHhCCC
Q 023411 115 VQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL-AADSLKALILNGE 192 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd-~~~~l~~l~~~~~ 192 (282)
+...++++||-+|+|. |..++.+++..+ ..+|+++|.+++.++.+++ .|.. .+.....+ ..+.+..+. .
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa~-~i~~~~~~~~~~~v~~~t---~ 251 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGFE-IADLSLDTPLHEQIAALL---G 251 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCE-EEETTSSSCHHHHHHHHH---S
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCCc-EEccCCcchHHHHHHHHh---C
Confidence 4556788999999865 778888888764 2389999999988877654 3542 11111111 222222221 1
Q ss_pred CCceeEEEEcCCccc------------cHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 193 ASSYDFAFVDAEKRM------------YQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 193 ~~~fDlV~id~~~~~------------~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
...+|+||-...... ....++.+.++ |++||.+++-..
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~G~iv~~G~ 301 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQV---TRVAGKIGIPGL 301 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHH---EEEEEEEEECSC
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHHHHHHH---HhcCCEEEEecc
Confidence 247999986544321 12357778888 999999987543
No 325
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.07 E-value=0.056 Score=48.42 Aligned_cols=96 Identities=20% Similarity=0.263 Sum_probs=64.3
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
...++++||-+|+|. |..+..+++.. +++|++++.+++..+.+++ .|.. .++.....+....+ .+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~-----~~ 256 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAH-----LK 256 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTT-----TT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHh-----hc
Confidence 456788999999874 77778888876 4789999999998887765 3433 22222222222222 25
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+|+||-....... ++...++ |+++|.++.=
T Consensus 257 g~Dvvid~~g~~~~---~~~~~~~---l~~~G~iv~~ 287 (369)
T 1uuf_A 257 SFDFILNTVAAPHN---LDDFTTL---LKRDGTMTLV 287 (369)
T ss_dssp CEEEEEECCSSCCC---HHHHHTT---EEEEEEEEEC
T ss_pred CCCEEEECCCCHHH---HHHHHHH---hccCCEEEEe
Confidence 79999865553322 4556677 9999998864
No 326
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.07 E-value=0.018 Score=50.95 Aligned_cols=103 Identities=19% Similarity=0.255 Sum_probs=67.7
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
...++++||-+|+|. |..+..+++... +.+|+++|.+++..+.+++ .|.+.-+.. ..+..+.+..+. ...
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~-~~~~~~~v~~~t---~g~ 238 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGADAAVKS-GAGAADAIRELT---GGQ 238 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-STTHHHHHHHHH---GGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCCEEEcC-CCcHHHHHHHHh---CCC
Confidence 456788999999875 777888888764 5799999999988877654 454321111 112222222221 124
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.+|+||-..... ..++.+.++ |+++|.++.=..
T Consensus 239 g~d~v~d~~G~~---~~~~~~~~~---l~~~G~iv~~G~ 271 (345)
T 3jv7_A 239 GATAVFDFVGAQ---STIDTAQQV---VAVDGHISVVGI 271 (345)
T ss_dssp CEEEEEESSCCH---HHHHHHHHH---EEEEEEEEECSC
T ss_pred CCeEEEECCCCH---HHHHHHHHH---HhcCCEEEEECC
Confidence 799998655432 356778888 999999987543
No 327
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.05 E-value=0.087 Score=46.72 Aligned_cols=116 Identities=10% Similarity=0.108 Sum_probs=77.1
Q ss_pred HHHHhhcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC--------------------CCC
Q 023411 112 AMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--------------------VSH 171 (282)
Q Consensus 112 ~~l~~~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--------------------~~~ 171 (282)
..++...+...|+.+|||.......+....+ +.+++-||. |+.++.-++.+...+ ..+
T Consensus 90 ~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~ 167 (334)
T 1rjd_A 90 LEFLVANEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQG 167 (334)
T ss_dssp HHHHHHCSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECS
T ss_pred HHHHHHCCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCC
Confidence 3333335677999999999998888887544 567888887 888888777777642 135
Q ss_pred cEEEEEcchhhH--HHHHHhC-CCCCceeEEEEcCC-----ccccHHHHHHHHHhhcCCCCCcEEE-EeCC
Q 023411 172 KVKIKHGLAADS--LKALILN-GEASSYDFAFVDAE-----KRMYQEYFELLLQLLLQIRVGGIIV-IDNV 233 (282)
Q Consensus 172 ~v~~~~gd~~~~--l~~l~~~-~~~~~fDlV~id~~-----~~~~~~~l~~~~~~~~~LkpgG~lv-~dd~ 233 (282)
+.+++.+|..+. +..+... ++.+...+++..+. .+.....++.+... . |+|.++ ++-+
T Consensus 168 ~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~---~-~~~~~v~~e~i 234 (334)
T 1rjd_A 168 RYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSK---F-SHGLWISYDPI 234 (334)
T ss_dssp SEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHH---C-SSEEEEEEEEC
T ss_pred ceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhh---C-CCcEEEEEecc
Confidence 799999998763 3332222 22356678887776 33345566667665 5 676654 5544
No 328
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.04 E-value=0.011 Score=52.16 Aligned_cols=97 Identities=18% Similarity=0.217 Sum_probs=61.8
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEE---cchhhHHHHHHhC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH---GLAADSLKALILN 190 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~---gd~~~~l~~l~~~ 190 (282)
...++++||-+|+ |.|..+..++... +++|+++|.+++.++.+++ .|.. ..+-. .+..+.+....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~-- 211 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQ----IGFD--AAFNYKTVNSLEEALKKAS-- 211 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS--EEEETTSCSCHHHHHHHHC--
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCc--EEEecCCHHHHHHHHHHHh--
Confidence 4557789999997 5666666777665 4799999999887766632 3432 22211 12222222221
Q ss_pred CCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 191 GEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+.+|++|..... ..++...++ |++||.+++=
T Consensus 212 --~~~~d~vi~~~g~----~~~~~~~~~---l~~~G~~v~~ 243 (333)
T 1v3u_A 212 --PDGYDCYFDNVGG----EFLNTVLSQ---MKDFGKIAIC 243 (333)
T ss_dssp --TTCEEEEEESSCH----HHHHHHHTT---EEEEEEEEEC
T ss_pred --CCCCeEEEECCCh----HHHHHHHHH---HhcCCEEEEE
Confidence 2579999877663 235666677 9999998864
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.04 E-value=0.02 Score=51.29 Aligned_cols=98 Identities=15% Similarity=0.184 Sum_probs=64.3
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc-----chhhHHHHHH
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHG-----LAADSLKALI 188 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-----d~~~~l~~l~ 188 (282)
...++++||-+|+|. |..++.+++..+ + +|+++|.+++..+.+++ .|.+ .++.. +..+.+..+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~t 258 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAG--ASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEKT 258 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHHh
Confidence 455788999999864 667778888764 5 89999999998877654 4543 12211 1222222221
Q ss_pred hCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCC-cEEEEeC
Q 023411 189 LNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVG-GIIVIDN 232 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkpg-G~lv~dd 232 (282)
.+.+|+||-.... ...++.+.++ |+++ |.++.-.
T Consensus 259 ----~gg~Dvvid~~g~---~~~~~~~~~~---l~~~~G~iv~~G 293 (373)
T 1p0f_A 259 ----NGGVDYAVECAGR---IETMMNALQS---TYCGSGVTVVLG 293 (373)
T ss_dssp ----TSCBSEEEECSCC---HHHHHHHHHT---BCTTTCEEEECC
T ss_pred ----CCCCCEEEECCCC---HHHHHHHHHH---HhcCCCEEEEEc
Confidence 2479999865442 2346677787 9999 9988744
No 330
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.03 E-value=0.022 Score=50.67 Aligned_cols=106 Identities=18% Similarity=0.172 Sum_probs=67.2
Q ss_pred HHHhhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC
Q 023411 113 MLVQILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 190 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~ 190 (282)
..+...++++||-+|+|. |..+..+++..+ + +|+++|.+++.++.+++ .|.. .++..+..+....+...
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLG--AGRIFAVGSRKHCCDIALE----YGAT---DIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT--CSSEEEECCCHHHHHHHHH----HTCC---EEECGGGSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CcEEEEECCCHHHHHHHHH----hCCc---eEEcCCCcCHHHHHHHH
Confidence 344556788999999874 777788887653 5 89999999887777655 3543 22222122222222221
Q ss_pred CCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 191 GEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.....+|+||-..... ..++.+.++ |++||.++.=..
T Consensus 231 t~g~g~D~v~d~~g~~---~~~~~~~~~---l~~~G~~v~~G~ 267 (352)
T 3fpc_A 231 TDGKGVDKVVIAGGDV---HTFAQAVKM---IKPGSDIGNVNY 267 (352)
T ss_dssp TTTCCEEEEEECSSCT---THHHHHHHH---EEEEEEEEECCC
T ss_pred cCCCCCCEEEECCCCh---HHHHHHHHH---HhcCCEEEEecc
Confidence 1134799998644432 236677788 999999987544
No 331
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.02 E-value=0.0097 Score=52.53 Aligned_cols=102 Identities=18% Similarity=0.097 Sum_probs=65.1
Q ss_pred HhhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 115 VQILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 115 ~~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
....++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+. +..|.. .++.....+....+....
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~---~~~g~~---~~~~~~~~~~~~~~~~~~- 215 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLV---EELGFD---GAIDYKNEDLAAGLKREC- 215 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH---HTTCCS---EEEETTTSCHHHHHHHHC-
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HHcCCC---EEEECCCHHHHHHHHHhc-
Confidence 45567889999998 4677777788775 479999999988766652 223442 122211122222222111
Q ss_pred CCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 193 ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 193 ~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+.+|+||..... ..++.+.++ |+++|.++.=.
T Consensus 216 ~~~~d~vi~~~g~----~~~~~~~~~---l~~~G~iv~~G 248 (336)
T 4b7c_A 216 PKGIDVFFDNVGG----EILDTVLTR---IAFKARIVLCG 248 (336)
T ss_dssp TTCEEEEEESSCH----HHHHHHHTT---EEEEEEEEECC
T ss_pred CCCceEEEECCCc----chHHHHHHH---HhhCCEEEEEe
Confidence 3579999876553 356777777 99999988743
No 332
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.01 E-value=0.0076 Score=53.40 Aligned_cols=103 Identities=13% Similarity=0.043 Sum_probs=65.0
Q ss_pred HhhcCCCEEEEEccc--ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 115 VQILGAQRCIEVGVY--TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G--~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
+...++++||-+|+| .|..+..+++.. +++|++++.+++..+.+++ .|... ++.....+....+.....
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lga~~---~~~~~~~~~~~~~~~~~~ 210 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLR----LGAAY---VIDTSTAPLYETVMELTN 210 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCSE---EEETTTSCHHHHHHHHTT
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----CCCcE---EEeCCcccHHHHHHHHhC
Confidence 345678899999986 577778888765 4799999999998887765 34331 222211222222221111
Q ss_pred CCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 193 ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 193 ~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
...+|+||-...... .....++ |+++|.++.=..
T Consensus 211 ~~g~Dvvid~~g~~~----~~~~~~~---l~~~G~iv~~G~ 244 (340)
T 3gms_A 211 GIGADAAIDSIGGPD----GNELAFS---LRPNGHFLTIGL 244 (340)
T ss_dssp TSCEEEEEESSCHHH----HHHHHHT---EEEEEEEEECCC
T ss_pred CCCCcEEEECCCChh----HHHHHHH---hcCCCEEEEEee
Confidence 358999987655332 2233366 999999988544
No 333
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.98 E-value=0.029 Score=50.24 Aligned_cols=99 Identities=16% Similarity=0.235 Sum_probs=64.7
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc-----chhhHHHHHH
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHG-----LAADSLKALI 188 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-----d~~~~l~~l~ 188 (282)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|.. .++.. +..+.+..+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~ 258 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAG--AARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEMS 258 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHHh
Confidence 445778999999864 667778888764 5 89999999998877653 3443 12211 1222222221
Q ss_pred hCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCC-cEEEEeCC
Q 023411 189 LNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVG-GIIVIDNV 233 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkpg-G~lv~dd~ 233 (282)
.+.+|+||-.... ...++...++ |+++ |.++.=..
T Consensus 259 ----~~g~D~vid~~g~---~~~~~~~~~~---l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 259 ----NGGVDFSFEVIGR---LDTMVTALSC---CQEAYGVSVIVGV 294 (374)
T ss_dssp ----TSCBSEEEECSCC---HHHHHHHHHH---BCTTTCEEEECSC
T ss_pred ----CCCCcEEEECCCC---HHHHHHHHHH---hhcCCcEEEEecc
Confidence 2479999865443 2346677788 9999 99887443
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.97 E-value=0.011 Score=52.94 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=66.0
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 115 VQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
....++++||-+|+|. |..+..+++.. +++|++++.+++.++.+++ .|... ++..+..+....+......
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGADH---GINRLEEDWVERVYALTGD 255 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCCE---EEcCCcccHHHHHHHHhCC
Confidence 3456788999999774 77778888876 4799999999988777654 35432 2222211222222111113
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
..+|+||-..... .++.+.++ |++||.+++=..
T Consensus 256 ~g~D~vid~~g~~----~~~~~~~~---l~~~G~iv~~G~ 288 (363)
T 3uog_A 256 RGADHILEIAGGA----GLGQSLKA---VAPDGRISVIGV 288 (363)
T ss_dssp CCEEEEEEETTSS----CHHHHHHH---EEEEEEEEEECC
T ss_pred CCceEEEECCChH----HHHHHHHH---hhcCCEEEEEec
Confidence 4799998765532 25667778 999999887544
No 335
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.90 E-value=0.085 Score=46.47 Aligned_cols=108 Identities=18% Similarity=0.153 Sum_probs=68.6
Q ss_pred HHhhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 114 l~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
.....++++||-+|+|. |..+..+++... ...++++|.+++.++.+++ .|...-+.....+..+....+..
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~--- 226 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRE--- 226 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGG---
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcc---
Confidence 33456788999999874 556777888765 3568999999987776654 45443222222333333333321
Q ss_pred CCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCCCC
Q 023411 193 ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 193 ~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
...+|+||-.... ...++.+.++ |++||.+++-....
T Consensus 227 ~~g~d~v~d~~G~---~~~~~~~~~~---l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 227 LRFNQLILETAGV---PQTVELAVEI---AGPHAQLALVGTLH 263 (346)
T ss_dssp GCSSEEEEECSCS---HHHHHHHHHH---CCTTCEEEECCCCS
T ss_pred cCCcccccccccc---cchhhhhhhe---ecCCeEEEEEeccC
Confidence 3567888765442 2456777888 99999998865543
No 336
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.87 E-value=0.074 Score=46.92 Aligned_cols=105 Identities=18% Similarity=0.128 Sum_probs=67.2
Q ss_pred HhhcCCCEEEEEccccc-HHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 115 VQILGAQRCIEVGVYTG-YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~G-~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
....++++||-+|+|.+ ..+..+++... +.+|+++|.+++..+.+++ .|...-+.....|..+.+..+. ..
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t---~g 230 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT---GG 230 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT---TS
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc---CC
Confidence 34567889999999864 45566666554 5899999999987665544 4444323333344444333331 13
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
..+|.++.+.... ..+....++ |+++|.+++-..
T Consensus 231 ~g~d~~~~~~~~~---~~~~~~~~~---l~~~G~~v~~g~ 264 (348)
T 4eez_A 231 LGVQSAIVCAVAR---IAFEQAVAS---LKPMGKMVAVAV 264 (348)
T ss_dssp SCEEEEEECCSCH---HHHHHHHHT---EEEEEEEEECCC
T ss_pred CCceEEEEeccCc---chhheehee---ecCCceEEEEec
Confidence 5688888776533 346677777 999999887543
No 337
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.86 E-value=0.035 Score=50.36 Aligned_cols=106 Identities=11% Similarity=0.088 Sum_probs=62.5
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 117 ILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 117 ~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
..++++||-+|+|. |..++.+++..+ + +|+++|.+++..+.+++ .|.. .++..+..+....+.......
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAG--ASKVILSEPSEVRRNLAKE----LGAD---HVIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHH----cCCC---EEEcCCCCCHHHHHHHHhCCC
Confidence 45778999999864 667777888764 5 99999999988877764 3433 222221122222222211134
Q ss_pred ceeEEEEcCCccccHHHHHHHHHh-hcCCCCCcEEEEeCC
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQL-LLQIRVGGIIVIDNV 233 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~-~~~LkpgG~lv~dd~ 233 (282)
.+|+||-..... ...+..+.+. ++.+++||.+++=..
T Consensus 282 g~D~vid~~g~~--~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 282 GAKLFLEATGVP--QLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CCSEEEECSSCH--HHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCEEEECCCCc--HHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 799998654433 1123334344 011599999988443
No 338
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.86 E-value=0.018 Score=51.03 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=64.5
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|... ++..+ .+....+......
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~---v~~~~-~~~~~~v~~~~~~ 225 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGADI---VLPLE-EGWAKAVREATGG 225 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSE---EEESS-TTHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcE---EecCc-hhHHHHHHHHhCC
Confidence 3457889999996 4677888888876 4799999999998877765 34332 22222 2222222211113
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
..+|+||-..... .++.+.++ |+++|.++.=.
T Consensus 226 ~g~Dvvid~~g~~----~~~~~~~~---l~~~G~iv~~G 257 (342)
T 4eye_A 226 AGVDMVVDPIGGP----AFDDAVRT---LASEGRLLVVG 257 (342)
T ss_dssp SCEEEEEESCC------CHHHHHHT---EEEEEEEEEC-
T ss_pred CCceEEEECCchh----HHHHHHHh---hcCCCEEEEEE
Confidence 4799998765543 35667777 99999988743
No 339
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.82 E-value=0.013 Score=51.75 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=64.8
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.. .++..+..+....+......
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~~~ 215 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGAE---YLINASKEDILRQVLKFTNG 215 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHTTT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEEeCCCchHHHHHHHHhCC
Confidence 3457889999994 4577777788775 4799999999887776654 3432 22222222222222221113
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
..+|+||-.... ..++.+.++ |++||.++.=.
T Consensus 216 ~g~D~vid~~g~----~~~~~~~~~---l~~~G~iv~~G 247 (334)
T 3qwb_A 216 KGVDASFDSVGK----DTFEISLAA---LKRKGVFVSFG 247 (334)
T ss_dssp SCEEEEEECCGG----GGHHHHHHH---EEEEEEEEECC
T ss_pred CCceEEEECCCh----HHHHHHHHH---hccCCEEEEEc
Confidence 579999876553 246677788 99999988743
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.79 E-value=0.031 Score=50.00 Aligned_cols=98 Identities=14% Similarity=0.216 Sum_probs=64.1
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc-----chhhHHHHHH
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHG-----LAADSLKALI 188 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-----d~~~~l~~l~ 188 (282)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|... ++.. +..+.+..+.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~G--a~~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~~~v~~~~ 257 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAG--ASRIIGVDINKDKFARAKE----FGATE---CINPQDFSKPIQEVLIEMT 257 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHH----HTCSE---EECGGGCSSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHH----cCCce---EeccccccccHHHHHHHHh
Confidence 445778999999764 667777887763 5 89999999998887764 34431 2211 1222222221
Q ss_pred hCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCC-cEEEEeC
Q 023411 189 LNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVG-GIIVIDN 232 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkpg-G~lv~dd 232 (282)
.+.+|+||-.... ...++.+.++ |+++ |.++.=.
T Consensus 258 ----~~g~D~vid~~g~---~~~~~~~~~~---l~~~~G~iv~~G 292 (373)
T 2fzw_A 258 ----DGGVDYSFECIGN---VKVMRAALEA---CHKGWGVSVVVG 292 (373)
T ss_dssp ----TSCBSEEEECSCC---HHHHHHHHHT---BCTTTCEEEECS
T ss_pred ----CCCCCEEEECCCc---HHHHHHHHHh---hccCCcEEEEEe
Confidence 2479999865443 2346677777 9999 9988744
No 341
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.68 E-value=0.021 Score=51.28 Aligned_cols=104 Identities=20% Similarity=0.218 Sum_probs=65.8
Q ss_pred hhcCCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEE--EcchhhHHHHHHhCCC
Q 023411 116 QILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK--HGLAADSLKALILNGE 192 (282)
Q Consensus 116 ~~~~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~--~gd~~~~l~~l~~~~~ 192 (282)
...++++||-+|+| .|..++.+++..+ -.+|+++|.+++.++.+++ .|...-+... ..+..+.+..+.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~i~~~~---- 260 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAKK----FGVNEFVNPKDHDKPIQEVIVDLT---- 260 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHHT----TTCCEEECGGGCSSCHHHHHHHHT----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCCcEEEccccCchhHHHHHHHhc----
Confidence 44578899999986 3777788888764 2389999999998876653 4543211111 112222222221
Q ss_pred CCceeEEEEcCCccccHHHHHHHHHhhcCCCCC-cEEEEeCCC
Q 023411 193 ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVG-GIIVIDNVL 234 (282)
Q Consensus 193 ~~~fDlV~id~~~~~~~~~l~~~~~~~~~Lkpg-G~lv~dd~~ 234 (282)
.+.+|+||-.... ...++.+.++ |++| |.+++=...
T Consensus 261 ~gg~D~vid~~g~---~~~~~~~~~~---l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 261 DGGVDYSFECIGN---VSVMRAALEC---CHKGWGTSVIVGVA 297 (378)
T ss_dssp TSCBSEEEECSCC---HHHHHHHHHT---BCTTTCEEEECSCC
T ss_pred CCCCCEEEECCCC---HHHHHHHHHH---hhccCCEEEEEccc
Confidence 3489999865543 2346777788 9997 998875443
No 342
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=95.66 E-value=0.06 Score=42.11 Aligned_cols=103 Identities=14% Similarity=0.188 Sum_probs=68.0
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
..-|||+|-|+|..=-.+.+.+| +-+++.+|..-.... ....+.-.++.||+.+.++...... ..+.-++
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~hp--------~~~P~~e~~ilGdi~~tL~~~~~r~-g~~a~La 110 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASHP--------DSTPPEAQLILGDIRETLPATLERF-GATASLV 110 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCCG--------GGCCCGGGEEESCHHHHHHHHHHHH-CSCEEEE
T ss_pred CCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccCC--------CCCCchHheecccHHHHHHHHHHhc-CCceEEE
Confidence 34799999999999999999998 788999996422110 0122335789999999887642211 3455566
Q ss_pred EEcCCccc---cHHHH----HHHHHhhcCCCCCcEEEEeCCCC
Q 023411 200 FVDAEKRM---YQEYF----ELLLQLLLQIRVGGIIVIDNVLW 235 (282)
Q Consensus 200 ~id~~~~~---~~~~l----~~~~~~~~~LkpgG~lv~dd~~~ 235 (282)
-.|-...+ ..... ..+.++ |.|||++|-+..+.
T Consensus 111 HaD~G~g~~~~d~a~a~~lsplI~~~---la~GGi~vS~~pl~ 150 (174)
T 3iht_A 111 HADLGGHNREKNDRFARLISPLIEPH---LAQGGLMVSSDRMY 150 (174)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHGGG---EEEEEEEEESSCCC
T ss_pred EeecCCCCcchhHHHHHhhhHHHHHH---hcCCcEEEeCCccC
Confidence 66654222 11122 233455 99999999988773
No 343
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.58 E-value=0.023 Score=50.01 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=62.9
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
+..++++||-+|+ |.|..+..++... +++|++++.+++.++.+++ .|.. . .+..+..+....+......
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~--~-~~d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCH--H-TINYSTQDFAEVVREITGG 212 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS--E-EEETTTSCHHHHHHHHHTT
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC--E-EEECCCHHHHHHHHHHhCC
Confidence 3457789999995 5677777777765 4799999999887776654 3432 1 2221111222222111012
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
..+|++|..... ..++.+.++ |+++|.++.=
T Consensus 213 ~~~d~vi~~~g~----~~~~~~~~~---l~~~G~iv~~ 243 (333)
T 1wly_A 213 KGVDVVYDSIGK----DTLQKSLDC---LRPRGMCAAY 243 (333)
T ss_dssp CCEEEEEECSCT----TTHHHHHHT---EEEEEEEEEC
T ss_pred CCCeEEEECCcH----HHHHHHHHh---hccCCEEEEE
Confidence 479999976554 235677777 9999988774
No 344
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.56 E-value=0.036 Score=49.10 Aligned_cols=100 Identities=11% Similarity=0.075 Sum_probs=63.1
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEE---cchhhHHHHHHhC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH---GLAADSLKALILN 190 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~---gd~~~~l~~l~~~ 190 (282)
...++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .|.. ..+-. .+..+.+....
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~-- 235 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGE--VFIDFTKEKDIVGAVLKAT-- 235 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCC--EEEETTTCSCHHHHHHHHH--
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCc--eEEecCccHhHHHHHHHHh--
Confidence 3457789999998 4677777777765 4799999999887766554 3432 11111 12222222221
Q ss_pred CCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 191 GEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
.+.+|+||..... ...++.+.+. |+++|.++.=..
T Consensus 236 --~~~~D~vi~~~g~---~~~~~~~~~~---l~~~G~iv~~g~ 270 (347)
T 2hcy_A 236 --DGGAHGVINVSVS---EAAIEASTRY---VRANGTTVLVGM 270 (347)
T ss_dssp --TSCEEEEEECSSC---HHHHHHHTTS---EEEEEEEEECCC
T ss_pred --CCCCCEEEECCCc---HHHHHHHHHH---HhcCCEEEEEeC
Confidence 2379999876553 2345666666 999999887433
No 345
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.55 E-value=0.015 Score=51.12 Aligned_cols=102 Identities=13% Similarity=0.046 Sum_probs=64.9
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
+..++++||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.. .++..+..+....+......
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAW---ETIDYSHEDVAKRVLELTDG 207 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCccHHHHHHHHhCC
Confidence 3457889999883 4577777788765 4799999999988877664 3432 22222222222222221113
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
..+|+||-..... .++.+.++ |++||.++.-..
T Consensus 208 ~g~Dvvid~~g~~----~~~~~~~~---l~~~G~iv~~g~ 240 (325)
T 3jyn_A 208 KKCPVVYDGVGQD----TWLTSLDS---VAPRGLVVSFGN 240 (325)
T ss_dssp CCEEEEEESSCGG----GHHHHHTT---EEEEEEEEECCC
T ss_pred CCceEEEECCChH----HHHHHHHH---hcCCCEEEEEec
Confidence 5799998765542 35667777 999999888543
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.51 E-value=0.056 Score=47.72 Aligned_cols=100 Identities=23% Similarity=0.186 Sum_probs=64.0
Q ss_pred hhcCCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 116 QILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 116 ~~~~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
...++++||-+|+| .|..+..+++.. +.+|++++.+++.++.+++ .|...-+.....+..+.+... .+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~d~~~~~~~~~~~~~-----~~ 229 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGADLVVNPLKEDAAKFMKEK-----VG 229 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTCSEEECTTTSCHHHHHHHH-----HS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCCCEEecCCCccHHHHHHHH-----hC
Confidence 45678899999986 477777788776 4799999999988776653 344311111011222222222 14
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+|+||..... ...++...++ |+++|.++.=.
T Consensus 230 ~~d~vid~~g~---~~~~~~~~~~---l~~~G~~v~~g 261 (339)
T 1rjw_A 230 GVHAAVVTAVS---KPAFQSAYNS---IRRGGACVLVG 261 (339)
T ss_dssp SEEEEEESSCC---HHHHHHHHHH---EEEEEEEEECC
T ss_pred CCCEEEECCCC---HHHHHHHHHH---hhcCCEEEEec
Confidence 79999876543 2346677788 99999988643
No 347
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.49 E-value=0.022 Score=50.65 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=64.3
Q ss_pred hhcCCCEEEEEc--ccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVG--VYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG--~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||-+| .|.|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+.... .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~----~ 233 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAET----G 233 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH----S
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHh----C
Confidence 345788999985 34577777788776 4799999999988877765 3433111111122222222222 3
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
..+|+||...... .++...+. |+++|.++.=..
T Consensus 234 ~g~Dvvid~~g~~----~~~~~~~~---l~~~G~iv~~g~ 266 (353)
T 4dup_A 234 QGVDIILDMIGAA----YFERNIAS---LAKDGCLSIIAF 266 (353)
T ss_dssp SCEEEEEESCCGG----GHHHHHHT---EEEEEEEEECCC
T ss_pred CCceEEEECCCHH----HHHHHHHH---hccCCEEEEEEe
Confidence 6799998766543 35666777 999999887443
No 348
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.44 E-value=0.044 Score=48.53 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=66.2
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCCEE-EEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHH-HHHhCCCCCcee
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESGCL-VACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK-ALILNGEASSYD 197 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~~v-~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~-~l~~~~~~~~fD 197 (282)
.-+++|+.||.|..++-+..+--+.-.+ .++|+++.+.+.-+.|+.. .++++|+.+..+ .+. ...+|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-------~~~~~DI~~~~~~~i~----~~~~D 78 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-------EVQVKNLDSISIKQIE----SLNCN 78 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-------CCBCCCTTTCCHHHHH----HTCCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-------CcccCChhhcCHHHhc----cCCCC
Confidence 4589999999999999888752101246 7999999998888887742 156778766533 221 13689
Q ss_pred EEEEcCCcccc---------------HHHHHHHHH-hhcCC--CCCcEEEEeCCC
Q 023411 198 FAFVDAEKRMY---------------QEYFELLLQ-LLLQI--RVGGIIVIDNVL 234 (282)
Q Consensus 198 lV~id~~~~~~---------------~~~l~~~~~-~~~~L--kpgG~lv~dd~~ 234 (282)
+++...+...+ ...+..+.+ +...+ +|. +++++||.
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lENV~ 132 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIENVP 132 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEEECG
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEEchh
Confidence 99875442221 123334444 43335 564 88999984
No 349
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.42 E-value=0.083 Score=46.74 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=63.9
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
...++++||-+|+|. |..+..+++.. +++|++++.+++..+.+++ .|.+. ++ .+. +. + ..
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~---v~-~~~-~~---~-----~~ 233 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALS----MGVKH---FY-TDP-KQ---C-----KE 233 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHH----TTCSE---EE-SSG-GG---C-----CS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHh----cCCCe---ec-CCH-HH---H-----hc
Confidence 556788999999875 77788888876 4799999999998877654 45432 22 332 11 1 24
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+|+||-...... .++.+.++ |+++|.++.=.
T Consensus 234 ~~D~vid~~g~~~---~~~~~~~~---l~~~G~iv~~G 265 (348)
T 3two_A 234 ELDFIISTIPTHY---DLKDYLKL---LTYNGDLALVG 265 (348)
T ss_dssp CEEEEEECCCSCC---CHHHHHTT---EEEEEEEEECC
T ss_pred CCCEEEECCCcHH---HHHHHHHH---HhcCCEEEEEC
Confidence 8999986554332 25566677 99999998843
No 350
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.40 E-value=0.017 Score=51.04 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=63.2
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc---chhhHHHHHHhC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG---LAADSLKALILN 190 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g---d~~~~l~~l~~~ 190 (282)
...++++||-+|+ |.|..+..+++.. +++|++++.+++.++.+++. .|.. ..+-.. +..+.+....
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~---~g~~--~~~d~~~~~~~~~~~~~~~-- 222 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTK---FGFD--DAFNYKEESDLTAALKRCF-- 222 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT---SCCS--EEEETTSCSCSHHHHHHHC--
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---cCCc--eEEecCCHHHHHHHHHHHh--
Confidence 4457889999997 4677777777765 47999999998877666532 2432 112111 2222333221
Q ss_pred CCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 191 GEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+.+|+||..... ..++.+.++ |++||.+++=
T Consensus 223 --~~~~d~vi~~~g~----~~~~~~~~~---l~~~G~~v~~ 254 (345)
T 2j3h_A 223 --PNGIDIYFENVGG----KMLDAVLVN---MNMHGRIAVC 254 (345)
T ss_dssp --TTCEEEEEESSCH----HHHHHHHTT---EEEEEEEEEC
T ss_pred --CCCCcEEEECCCH----HHHHHHHHH---HhcCCEEEEE
Confidence 2579999876553 246667777 9999998873
No 351
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.40 E-value=0.017 Score=50.66 Aligned_cols=101 Identities=17% Similarity=0.114 Sum_probs=62.7
Q ss_pred hhcCCCEEEEEc--ccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVG--VYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG--~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||-+| .|.|..+..+++.. +++|++++.+++..+.+++ .|.. . ++..+..+....+......
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW--Q-VINYREEDLVERLKEITGG 207 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS--E-EEETTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC--E-EEECCCccHHHHHHHHhCC
Confidence 345778999998 34566666677654 4799999999887777654 2432 1 2221111222222211113
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
..+|++|.... . ..++.+.++ |+++|.++.=.
T Consensus 208 ~~~D~vi~~~g-~---~~~~~~~~~---l~~~G~iv~~g 239 (327)
T 1qor_A 208 KKVRVVYDSVG-R---DTWERSLDC---LQRRGLMVSFG 239 (327)
T ss_dssp CCEEEEEECSC-G---GGHHHHHHT---EEEEEEEEECC
T ss_pred CCceEEEECCc-h---HHHHHHHHH---hcCCCEEEEEe
Confidence 47999997766 2 235677777 99999988743
No 352
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.35 E-value=0.035 Score=48.78 Aligned_cols=97 Identities=14% Similarity=0.015 Sum_probs=63.3
Q ss_pred EEEEEcccccHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEE
Q 023411 122 RCIEVGVYTGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~ 200 (282)
+|||+-||.|.+++-+-++ +. .+.++|+++.+.+.-+.|+. -.++.+|+.+..... -..+|+++
T Consensus 2 kvidLFsG~GG~~~G~~~a---G~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~-----~~~~D~l~ 66 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA---GFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDE-----FPKCDGII 66 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT---TCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGG-----SCCCSEEE
T ss_pred eEEEeCcCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhh-----CCcccEEE
Confidence 7999999999999888764 23 47899999998877776642 367889987753322 35789887
Q ss_pred EcCC------------ccc-cHHHHHHHHHhhcCCCCCcEEEEeCCC
Q 023411 201 VDAE------------KRM-YQEYFELLLQLLLQIRVGGIIVIDNVL 234 (282)
Q Consensus 201 id~~------------~~~-~~~~l~~~~~~~~~LkpgG~lv~dd~~ 234 (282)
...+ ..+ ....+..+.++...++|. +++++||-
T Consensus 67 ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~ 112 (331)
T 3ubt_Y 67 GGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVK 112 (331)
T ss_dssp CCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECC
T ss_pred ecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeeeec
Confidence 5432 111 112222222222226886 88999984
No 353
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.26 E-value=0.041 Score=48.64 Aligned_cols=101 Identities=17% Similarity=0.172 Sum_probs=64.7
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||-+|+ |.|..+..+++.. +.+|++++.+++.++.+++ .|... ++..+..+....+......
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~~---~~d~~~~~~~~~~~~~~~~ 233 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGADE---TVNYTHPDWPKEVRRLTGG 233 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSE---EEETTSTTHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCCE---EEcCCcccHHHHHHHHhCC
Confidence 3456789999998 5777888888876 4799999999988877654 34331 2222111222222111112
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
..+|+||.... .. .++.+.++ |+++|.++.=.
T Consensus 234 ~~~d~vi~~~g-~~---~~~~~~~~---l~~~G~~v~~g 265 (343)
T 2eih_A 234 KGADKVVDHTG-AL---YFEGVIKA---TANGGRIAIAG 265 (343)
T ss_dssp TCEEEEEESSC-SS---SHHHHHHH---EEEEEEEEESS
T ss_pred CCceEEEECCC-HH---HHHHHHHh---hccCCEEEEEe
Confidence 47999997766 32 35667777 99999888743
No 354
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.21 E-value=0.14 Score=45.84 Aligned_cols=102 Identities=16% Similarity=0.186 Sum_probs=63.9
Q ss_pred hcCCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc---hhhHHHHHHhCCC
Q 023411 117 ILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL---AADSLKALILNGE 192 (282)
Q Consensus 117 ~~~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd---~~~~l~~l~~~~~ 192 (282)
..++++||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++ .|.. .++..+ ..+....+.....
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHHTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHHhC
Confidence 4567899999966 3667777888763 1599999999988777653 4543 223222 2222222221111
Q ss_pred CCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 193 ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 193 ~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
...+|+||-..... ..++.+.++ |+++|.++.=.
T Consensus 265 g~g~Dvvid~~g~~---~~~~~~~~~---l~~~G~iv~~G 298 (380)
T 1vj0_A 265 GRGADFILEATGDS---RALLEGSEL---LRRGGFYSVAG 298 (380)
T ss_dssp TSCEEEEEECSSCT---THHHHHHHH---EEEEEEEEECC
T ss_pred CCCCcEEEECCCCH---HHHHHHHHH---HhcCCEEEEEe
Confidence 23799998655432 235677788 99999988743
No 355
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.13 E-value=0.035 Score=49.25 Aligned_cols=104 Identities=15% Similarity=0.106 Sum_probs=64.4
Q ss_pred CEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~ 200 (282)
-+++|+.||.|..++-+..+--..-.+.++|+++.+.+.-+.|+.. ..++++|+.+..+.... ...+|+++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~---~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIK---KWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHH---HTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhc---cCCCCEEE
Confidence 3799999999999998887521013478999999888777766531 34677888765332211 23689998
Q ss_pred EcCCc------------cc-cHHHHHHHHHhhcCCC-CCcEEEEeCCC
Q 023411 201 VDAEK------------RM-YQEYFELLLQLLLQIR-VGGIIVIDNVL 234 (282)
Q Consensus 201 id~~~------------~~-~~~~l~~~~~~~~~Lk-pgG~lv~dd~~ 234 (282)
...+. .+ ....+..+.++...++ |. +++++||-
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~-~~vlENV~ 121 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVD-YILMENVK 121 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCC-EEEEEECT
T ss_pred ecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCCC-EEEEecch
Confidence 65431 00 1111222233322255 65 88999985
No 356
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.12 E-value=0.04 Score=48.93 Aligned_cols=102 Identities=11% Similarity=0.055 Sum_probs=62.8
Q ss_pred HhhcCC--CEEEEEcc--cccHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHh
Q 023411 115 VQILGA--QRCIEVGV--YTGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (282)
Q Consensus 115 ~~~~~~--~~VLEIG~--G~G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~ 189 (282)
....++ ++||-.|+ |.|..+..+++.. ++ +|++++.+++..+.+++. .|.. . ++..+..+....+..
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~---~g~~--~-~~d~~~~~~~~~~~~ 225 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSE---LGFD--A-AINYKKDNVAEQLRE 225 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT---SCCS--E-EEETTTSCHHHHHHH
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHH---cCCc--e-EEecCchHHHHHHHH
Confidence 345567 89999997 4566666677665 46 999999998766655432 3432 1 222111122222211
Q ss_pred CCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 190 NGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.. .+.+|++|..... ..++.+.++ |++||.++.=.
T Consensus 226 ~~-~~~~d~vi~~~G~----~~~~~~~~~---l~~~G~iv~~G 260 (357)
T 2zb4_A 226 SC-PAGVDVYFDNVGG----NISDTVISQ---MNENSHIILCG 260 (357)
T ss_dssp HC-TTCEEEEEESCCH----HHHHHHHHT---EEEEEEEEECC
T ss_pred hc-CCCCCEEEECCCH----HHHHHHHHH---hccCcEEEEEC
Confidence 11 2379999877663 456777777 99999988743
No 357
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.12 E-value=0.03 Score=49.55 Aligned_cols=100 Identities=15% Similarity=0.109 Sum_probs=64.6
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch-hhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA-ADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~-~~~l~~l~~~~~~ 193 (282)
.. ++++||-+|+|. |..+..+++...++++|++++.+++..+.+++ .|.+ .++..+. .+....+.. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~---g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD---YVSEMKDAESLINKLTD---G 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS---EEECHHHHHHHHHHHHT---T
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC---EEeccccchHHHHHhhc---C
Confidence 45 788999999864 66777788776114789999999988777654 3433 2221111 122233321 2
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
..+|+||-.... ...++.+.++ |+++|.++.=.
T Consensus 237 ~g~D~vid~~g~---~~~~~~~~~~---l~~~G~iv~~g 269 (344)
T 2h6e_A 237 LGASIAIDLVGT---EETTYNLGKL---LAQEGAIILVG 269 (344)
T ss_dssp CCEEEEEESSCC---HHHHHHHHHH---EEEEEEEEECC
T ss_pred CCccEEEECCCC---hHHHHHHHHH---hhcCCEEEEeC
Confidence 379999866543 2346777788 99999988743
No 358
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.12 E-value=0.049 Score=48.23 Aligned_cols=101 Identities=14% Similarity=0.213 Sum_probs=63.4
Q ss_pred HhhcCCCEEEEEccc--ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc--hhhHHHHHHhC
Q 023411 115 VQILGAQRCIEVGVY--TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL--AADSLKALILN 190 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G--~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd--~~~~l~~l~~~ 190 (282)
+...++++||-+|+| .|..+..+++... +++|+++|.+++..+.+++ .|.. ..+-..+ ..+....+.
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~-- 236 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGAD--YVINASMQDPLAEIRRIT-- 236 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHT--
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCC--EEecCCCccHHHHHHHHh--
Confidence 345678899999987 5556667776651 4799999999988777654 3432 1221111 111122221
Q ss_pred CCC-CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 191 GEA-SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 191 ~~~-~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
. +.+|+||...... ..++.+.++ |+++|.++.=.
T Consensus 237 --~~~~~d~vi~~~g~~---~~~~~~~~~---l~~~G~iv~~g 271 (347)
T 1jvb_A 237 --ESKGVDAVIDLNNSE---KTLSVYPKA---LAKQGKYVMVG 271 (347)
T ss_dssp --TTSCEEEEEESCCCH---HHHTTGGGG---EEEEEEEEECC
T ss_pred --cCCCceEEEECCCCH---HHHHHHHHH---HhcCCEEEEEC
Confidence 2 5899998765532 345566677 99999988743
No 359
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.09 E-value=0.042 Score=47.94 Aligned_cols=76 Identities=12% Similarity=-0.026 Sum_probs=52.3
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCE-EEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGC-LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~-v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
...+++|+-||.|..++.+.++-- ... +.++|+++.+.+.-+.++. ...++.+|+.+........ .+.+|
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~--~~~~D 85 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQE--WGPFD 85 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHH--TCCCS
T ss_pred CCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcc--cCCcC
Confidence 455899999999999988877521 122 6999999988776666542 2467889988754322111 24789
Q ss_pred EEEEcC
Q 023411 198 FAFVDA 203 (282)
Q Consensus 198 lV~id~ 203 (282)
+++...
T Consensus 86 ll~ggp 91 (295)
T 2qrv_A 86 LVIGGS 91 (295)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 998653
No 360
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.08 E-value=0.018 Score=49.07 Aligned_cols=52 Identities=19% Similarity=0.211 Sum_probs=38.6
Q ss_pred EEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc-----------------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 173 VKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-----------------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 173 v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~-----------------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+++++|+.+.+..+. .++||+||+|++... ....++.+.++ |+|||.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~----~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~---Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVE----NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDK---LDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSC----TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred CeEEechHHHHHHhcc----ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHH---hcCCeEEEEE
Confidence 5688999998877663 468999999988321 12345555666 9999999885
No 361
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.06 E-value=0.039 Score=49.08 Aligned_cols=101 Identities=10% Similarity=0.117 Sum_probs=62.5
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
+..++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.. .++..+..+....+......
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~~~~~~~~~~~~~ 237 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQ----NGAH---EVFNHREVNYIDKIKKYVGE 237 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTSTTHHHHHHHHHCT
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHH----cCCC---EEEeCCCchHHHHHHHHcCC
Confidence 3457789999996 4566777777765 4799999999887765543 3432 12222112222222111112
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
..+|+||..... ..++...++ |+++|.++.=.
T Consensus 238 ~~~D~vi~~~G~----~~~~~~~~~---l~~~G~iv~~g 269 (351)
T 1yb5_A 238 KGIDIIIEMLAN----VNLSKDLSL---LSHGGRVIVVG 269 (351)
T ss_dssp TCEEEEEESCHH----HHHHHHHHH---EEEEEEEEECC
T ss_pred CCcEEEEECCCh----HHHHHHHHh---ccCCCEEEEEe
Confidence 479999876543 235667777 99999988743
No 362
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.99 E-value=0.071 Score=47.47 Aligned_cols=97 Identities=22% Similarity=0.206 Sum_probs=63.3
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchh-hHHHHHHhCCC
Q 023411 115 VQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA-DSLKALILNGE 192 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~-~~l~~l~~~~~ 192 (282)
+...++++||-+|+|. |..+..+++.. +++|++++.+++.++.+++ .|.. .++..+.. +....+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~----- 240 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKY----- 240 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHS-----
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHh-----
Confidence 3456788999999853 66777788775 4789999999998877765 3433 22222212 233333
Q ss_pred CCceeEEEEcCCc--cccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 193 ASSYDFAFVDAEK--RMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 193 ~~~fDlV~id~~~--~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+.+|+||..... .. .++.+.++ |++||.++.=
T Consensus 241 ~~~~D~vid~~g~~~~~---~~~~~~~~---l~~~G~iv~~ 275 (360)
T 1piw_A 241 FDTFDLIVVCASSLTDI---DFNIMPKA---MKVGGRIVSI 275 (360)
T ss_dssp CSCEEEEEECCSCSTTC---CTTTGGGG---EEEEEEEEEC
T ss_pred hcCCCEEEECCCCCcHH---HHHHHHHH---hcCCCEEEEe
Confidence 2579999865543 22 13445566 9999998864
No 363
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.87 E-value=0.022 Score=50.24 Aligned_cols=54 Identities=11% Similarity=0.236 Sum_probs=39.5
Q ss_pred CcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc-----------------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 171 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-----------------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 171 ~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~-----------------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
++.++++||..+.+..+. .++||+||+|++... ....+..+.++ |+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~----~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rv---Lk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP----EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKK---LKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSC----SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCC----CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHH---CcCCcEEEEE
Confidence 458999999987665442 578999999987421 23455566666 9999998874
No 364
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.86 E-value=0.11 Score=46.38 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=63.1
Q ss_pred CCCEEEEEc-cc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 119 GAQRCIEVG-VY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 119 ~~~~VLEIG-~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
++++||-+| +| .|..+..+++.+. +++|++++.+++..+.+++ .|.+ .++... .+....+... ..+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~-~~~~~~v~~~-~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGAH---HVIDHS-KPLAAEVAAL-GLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTCS---EEECTT-SCHHHHHHTT-CSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCCC---EEEeCC-CCHHHHHHHh-cCCCc
Confidence 567899998 44 5778888888643 5799999999987777654 4543 122111 1222333222 24689
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|+||-.... ...++.+.++ |+++|.++.=
T Consensus 241 Dvvid~~g~---~~~~~~~~~~---l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTHT---DKHAAEIADL---IAPQGRFCLI 269 (363)
T ss_dssp EEEEECSCH---HHHHHHHHHH---SCTTCEEEEC
T ss_pred eEEEECCCc---hhhHHHHHHH---hcCCCEEEEE
Confidence 988865442 2346778888 9999998863
No 365
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.75 E-value=0.13 Score=44.54 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=62.0
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch-hhHHHHHHhCCCC
Q 023411 117 ILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA-ADSLKALILNGEA 193 (282)
Q Consensus 117 ~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~-~~~l~~l~~~~~~ 193 (282)
..++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.. .++..+. .+....+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~------ 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAW------ 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHT------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHh------
Confidence 457789999997 4577788888876 4799999999988777654 3432 2222211 2222222
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
..+|+||. .... .++...++ |+++|.++.=
T Consensus 188 ~~~d~vid-~g~~----~~~~~~~~---l~~~G~~v~~ 217 (302)
T 1iz0_A 188 GGLDLVLE-VRGK----EVEESLGL---LAHGGRLVYI 217 (302)
T ss_dssp TSEEEEEE-CSCT----THHHHHTT---EEEEEEEEEC
T ss_pred cCceEEEE-CCHH----HHHHHHHh---hccCCEEEEE
Confidence 57999997 5542 35667777 9999988863
No 366
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.72 E-value=0.092 Score=46.64 Aligned_cols=99 Identities=11% Similarity=0.081 Sum_probs=61.8
Q ss_pred HhhcCC------CEEEEEccc-ccHHH-HHHH-HHCCCCCE-EEEEecCcc---HHHHHHHHHHHhCCCCcEEEEEcchh
Q 023411 115 VQILGA------QRCIEVGVY-TGYSS-LAIA-LVLPESGC-LVACERDAR---SLEVAKKYYERAGVSHKVKIKHGLAA 181 (282)
Q Consensus 115 ~~~~~~------~~VLEIG~G-~G~~t-~~la-~~~~~~~~-v~~iD~s~~---~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (282)
+...++ ++||-+|+| .|..+ +.++ +.. +++ |++++.+++ ..+.+++ .|.+ .+.....+..
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~ 234 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEE----LDAT-YVDSRQTPVE 234 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHH----TTCE-EEETTTSCGG
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHH----cCCc-ccCCCccCHH
Confidence 345566 899999974 35566 6777 655 455 999999988 7776653 3432 1211111222
Q ss_pred hHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 182 ~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+ +..+ .+.+|+||-..... ..++.+.++ |+++|.++.=.
T Consensus 235 ~-i~~~-----~gg~Dvvid~~g~~---~~~~~~~~~---l~~~G~iv~~g 273 (357)
T 2b5w_A 235 D-VPDV-----YEQMDFIYEATGFP---KHAIQSVQA---LAPNGVGALLG 273 (357)
T ss_dssp G-HHHH-----SCCEEEEEECSCCH---HHHHHHHHH---EEEEEEEEECC
T ss_pred H-HHHh-----CCCCCEEEECCCCh---HHHHHHHHH---HhcCCEEEEEe
Confidence 3 3332 13899998654422 346777788 99999988743
No 367
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.65 E-value=0.036 Score=48.85 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=39.4
Q ss_pred CcEEEE-EcchhhHHHHHHhCCCCCceeEEEEcCCccc--------------cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 171 HKVKIK-HGLAADSLKALILNGEASSYDFAFVDAEKRM--------------YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 171 ~~v~~~-~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~--------------~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
...+++ ++|+.+.+..+. .++||+||+|++... ....+..+.++ |+|||.+++.
T Consensus 37 ~~~~l~i~gD~l~~L~~l~----~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rv---Lk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLP----DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERV---LSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTSC----TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHH---EEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCc----cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHH---cCCCeEEEEE
Confidence 346788 999998876553 468999999988432 22344555666 9999999885
No 368
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.58 E-value=0.091 Score=46.48 Aligned_cols=98 Identities=17% Similarity=0.192 Sum_probs=61.7
Q ss_pred CCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 119 GAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 119 ~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
++++||-+|+|. |..+..+++.. ++ +|++++.+++..+.+++ .|.. .++..+..+....+........+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKK----VGAD---YVINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH----hCCC---EEECCCCcCHHHHHHHHcCCCCC
Confidence 678999999853 66777788776 45 89999999887776653 3432 12221111222222111112479
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|+||-.... ...++.+.++ |+++|.++.=
T Consensus 238 D~vid~~g~---~~~~~~~~~~---l~~~G~iv~~ 266 (348)
T 2d8a_A 238 DVFLEFSGA---PKALEQGLQA---VTPAGRVSLL 266 (348)
T ss_dssp EEEEECSCC---HHHHHHHHHH---EEEEEEEEEC
T ss_pred CEEEECCCC---HHHHHHHHHH---HhcCCEEEEE
Confidence 999865543 2346677788 9999988864
No 369
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.55 E-value=0.1 Score=46.05 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=62.4
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||-+|+ |.|..+..+++.. +++|+++ .+++.++.+++ .|... +. ...+..+.+.... ..
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~----lGa~~-i~-~~~~~~~~~~~~~---~~ 214 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD----LGATP-ID-ASREPEDYAAEHT---AG 214 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH----HTSEE-EE-TTSCHHHHHHHHH---TT
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH----cCCCE-ec-cCCCHHHHHHHHh---cC
Confidence 4457889999994 4577788888876 4799999 88877666544 45432 22 1122222222221 13
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
..+|+||-.... ..++.+.++ |+++|.++.-
T Consensus 215 ~g~D~vid~~g~----~~~~~~~~~---l~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYDTLGG----PVLDASFSA---VKRFGHVVSC 245 (343)
T ss_dssp SCEEEEEESSCT----HHHHHHHHH---EEEEEEEEES
T ss_pred CCceEEEECCCc----HHHHHHHHH---HhcCCeEEEE
Confidence 579998865552 356777788 9999998873
No 370
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.49 E-value=0.074 Score=47.25 Aligned_cols=101 Identities=11% Similarity=0.107 Sum_probs=62.9
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
...++++||-+|+ |.|..+..++... +++|++++.+++.++.+++ .|.. . ++..+..+....+......
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~~~~~~~~~~~~ 229 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEK----LGAA--A-GFNYKKEDFSEATLKFTKG 229 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCS--E-EEETTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCc--E-EEecCChHHHHHHHHHhcC
Confidence 3456789999984 4566677777765 4799999999888777643 2432 1 2222112222222211112
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
..+|++|...... .++...++ |++||.++.=.
T Consensus 230 ~~~d~vi~~~G~~----~~~~~~~~---l~~~G~iv~~G 261 (354)
T 2j8z_A 230 AGVNLILDCIGGS----YWEKNVNC---LALDGRWVLYG 261 (354)
T ss_dssp SCEEEEEESSCGG----GHHHHHHH---EEEEEEEEECC
T ss_pred CCceEEEECCCch----HHHHHHHh---ccCCCEEEEEe
Confidence 4799998776643 35566777 99999988743
No 371
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.33 E-value=0.038 Score=48.07 Aligned_cols=53 Identities=19% Similarity=0.297 Sum_probs=37.4
Q ss_pred cEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc----------------c-------HHHHHHHHHhhcCCCCCcEE
Q 023411 172 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM----------------Y-------QEYFELLLQLLLQIRVGGII 228 (282)
Q Consensus 172 ~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~----------------~-------~~~l~~~~~~~~~LkpgG~l 228 (282)
++++++||..+.++.+. +++||+||+|++... + ...+..+.++ |+|||.+
T Consensus 21 ~~~i~~gD~~~~l~~l~----~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rv---Lk~~G~l 93 (297)
T 2zig_A 21 VHRLHVGDAREVLASFP----EASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRL---LVPGGRL 93 (297)
T ss_dssp CEEEEESCHHHHHTTSC----TTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHH---EEEEEEE
T ss_pred CCEEEECcHHHHHhhCC----CCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHH---cCCCcEE
Confidence 58999999998765442 479999999987421 1 1234455566 9999988
Q ss_pred EEe
Q 023411 229 VID 231 (282)
Q Consensus 229 v~d 231 (282)
++.
T Consensus 94 ~i~ 96 (297)
T 2zig_A 94 VIV 96 (297)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 372
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.31 E-value=0.13 Score=45.41 Aligned_cols=95 Identities=18% Similarity=0.262 Sum_probs=61.2
Q ss_pred CCCEEEEEc-cc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 119 GAQRCIEVG-VY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 119 ~~~~VLEIG-~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
++++||-+| +| .|..+..+++.. +++|++++.+++.++.+++ .|... +--...+..+.+... . ...+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~-vi~~~~~~~~~~~~~---~-~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGADI-VLNHKESLLNQFKTQ---G-IELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCSE-EECTTSCHHHHHHHH---T-CCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcE-EEECCccHHHHHHHh---C-CCCc
Confidence 678999884 44 477777788876 4799999999988777765 34331 110011222222222 1 4689
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|+||-.... ...++.+.++ |+++|.++.
T Consensus 219 Dvv~d~~g~---~~~~~~~~~~---l~~~G~iv~ 246 (346)
T 3fbg_A 219 DYVFCTFNT---DMYYDDMIQL---VKPRGHIAT 246 (346)
T ss_dssp EEEEESSCH---HHHHHHHHHH---EEEEEEEEE
T ss_pred cEEEECCCc---hHHHHHHHHH---hccCCEEEE
Confidence 999865442 2346777788 999999875
No 373
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.13 E-value=0.27 Score=43.88 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=61.5
Q ss_pred cCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 118 LGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 118 ~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
.++++||-+|+ +.|..+..+++.. +++|+++. +++..+.+++ .|...-+.....+..+.+..+. .+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t----~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKS----RGAEEVFDYRAPNLAQTIRTYT----KNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHH----TTCSEEEETTSTTHHHHHHHHT----TTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHH----cCCcEEEECCCchHHHHHHHHc----cCC
Confidence 56789999998 3788888899886 47898885 7877766543 4543212211222222222221 345
Q ss_pred eeEEEEcCCccccHHHHHHHHHhhcCC-CCCcEEEEeC
Q 023411 196 YDFAFVDAEKRMYQEYFELLLQLLLQI-RVGGIIVIDN 232 (282)
Q Consensus 196 fDlV~id~~~~~~~~~l~~~~~~~~~L-kpgG~lv~dd 232 (282)
+|+||-..... ..++.+.+. | ++||.++.=.
T Consensus 232 ~d~v~d~~g~~---~~~~~~~~~---l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCITNV---ESTTFCFAA---IGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESSCSH---HHHHHHHHH---SCTTCEEEEESS
T ss_pred ccEEEECCCch---HHHHHHHHH---hhcCCCEEEEEe
Confidence 99998654432 346667777 8 6999988743
No 374
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.92 E-value=0.2 Score=38.11 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=56.8
Q ss_pred CEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCcee
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYD 197 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~fD 197 (282)
.+|+=+|+ |.++..+++.+. .+..|+++|.+++.++.+++ .| +.++.+|..+. +... + -..+|
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g----~~~i~gd~~~~~~l~~a---~-i~~ad 73 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG----VRAVLGNAANEEIMQLA---H-LECAK 73 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEESCTTSHHHHHHT---T-GGGCS
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC----CCEEECCCCCHHHHHhc---C-cccCC
Confidence 46887887 556655555542 24689999999987766543 22 67888988653 2221 1 35789
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+|++...........-...+. +.|+..+++
T Consensus 74 ~vi~~~~~~~~n~~~~~~a~~---~~~~~~iia 103 (140)
T 3fwz_A 74 WLILTIPNGYEAGEIVASARA---KNPDIEIIA 103 (140)
T ss_dssp EEEECCSCHHHHHHHHHHHHH---HCSSSEEEE
T ss_pred EEEEECCChHHHHHHHHHHHH---HCCCCeEEE
Confidence 988765543322222223333 677777665
No 375
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.80 E-value=0.2 Score=45.88 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=64.1
Q ss_pred HhhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch------------
Q 023411 115 VQILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA------------ 180 (282)
Q Consensus 115 ~~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~------------ 180 (282)
+...++++||-+|+ |.|..+..+++.. ++++++++.+++.++.+++ .|...-+.....+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVV 289 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccc
Confidence 34567889999986 3577777888876 4799999998887776643 45443121111111
Q ss_pred ------hhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 181 ------ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 181 ------~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+.+.... ...+|+||-.... ..++...++ |++||.++.=.
T Consensus 290 ~~~~~~~~~v~~~~----g~g~Dvvid~~G~----~~~~~~~~~---l~~~G~iv~~G 336 (447)
T 4a0s_A 290 ETGRKLAKLVVEKA----GREPDIVFEHTGR----VTFGLSVIV---ARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHH----SSCCSEEEECSCH----HHHHHHHHH---SCTTCEEEESC
T ss_pred hhhhHHHHHHHHHh----CCCceEEEECCCc----hHHHHHHHH---HhcCCEEEEEe
Confidence 11111211 3579999876553 246777788 99999988743
No 376
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.63 E-value=0.22 Score=43.75 Aligned_cols=56 Identities=7% Similarity=0.096 Sum_probs=42.3
Q ss_pred HHHHHHh--hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCc---cHHHHHHHHHHHhC
Q 023411 110 LLAMLVQ--ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDA---RSLEVAKKYYERAG 168 (282)
Q Consensus 110 ll~~l~~--~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~---~~~~~a~~~~~~~g 168 (282)
++..++. ..++..|||--||+|..+...... +-+.+++|+++ +.++.+++++...+
T Consensus 231 l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 231 VIERLVRALSHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4444443 357789999999999988877765 35899999999 99999999988766
No 377
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.48 E-value=0.14 Score=47.19 Aligned_cols=101 Identities=15% Similarity=0.180 Sum_probs=64.1
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch-------------
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA------------- 180 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~------------- 180 (282)
...++++||-+|+ |.|..++.+++.. ++++++++.+++.++.+++ .|...-+.....|.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHH
Confidence 4467889999997 4577788888876 4799999988887777654 35432111111111
Q ss_pred ----hhHHHHHHhCCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 181 ----ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 181 ----~~~l~~l~~~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+.+..+. ....+|+||-.... ..++...++ |++||.++.=.
T Consensus 299 ~~~~~~~i~~~t---~g~g~Dvvid~~G~----~~~~~~~~~---l~~~G~iv~~G 344 (456)
T 3krt_A 299 WKRFGKRIRELT---GGEDIDIVFEHPGR----ETFGASVFV---TRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHH---TSCCEEEEEECSCH----HHHHHHHHH---EEEEEEEEESC
T ss_pred HHHHHHHHHHHh---CCCCCcEEEEcCCc----hhHHHHHHH---hhCCcEEEEEe
Confidence 01222221 13589998865443 356777788 99999998743
No 378
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.47 E-value=0.093 Score=46.20 Aligned_cols=61 Identities=7% Similarity=-0.036 Sum_probs=46.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (282)
..++..|||-.||+|..+...... +-+.+++|+++...+.++++++..+.. ...++.|+.+
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~ 310 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNR 310 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHH
Confidence 357789999999999987776653 468999999999999999998866643 3444444443
No 379
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.45 E-value=0.065 Score=47.35 Aligned_cols=93 Identities=11% Similarity=0.136 Sum_probs=60.2
Q ss_pred CCCEEEEEcccc-cHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEc---chhhHHHHHHhCCCC
Q 023411 119 GAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHG---LAADSLKALILNGEA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g---d~~~~l~~l~~~~~~ 193 (282)
++++||-+|+|. |..+..+++.. ++ +|++++.+++..+.+++. . + .++.. +..+.+..+. .
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~----~ 229 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVT----G 229 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHH----S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhc----C
Confidence 678999999853 66777788776 46 899999998877666542 1 1 12221 2222222221 2
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
..+|+||-.... ...++...++ |+++|.++.=
T Consensus 230 ~g~D~vid~~g~---~~~~~~~~~~---l~~~G~iv~~ 261 (343)
T 2dq4_A 230 SGVEVLLEFSGN---EAAIHQGLMA---LIPGGEARIL 261 (343)
T ss_dssp SCEEEEEECSCC---HHHHHHHHHH---EEEEEEEEEC
T ss_pred CCCCEEEECCCC---HHHHHHHHHH---HhcCCEEEEE
Confidence 579999865543 2346677788 9999988864
No 380
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.11 E-value=0.33 Score=43.25 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=59.1
Q ss_pred CCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 119 GAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 119 ~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
++++||-+|+|. |..+..+++.. +++|++++.+++..+.+++ ..|.. .++..+-.+.+..+ .+.+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~-----~~~~D 253 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAA-----AGTLD 253 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHT-----TTCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHh-----hCCCC
Confidence 678999999753 55667777765 4799999999887766543 23432 22222212223332 25799
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+||........ ++...++ |+++|.++.=
T Consensus 254 ~vid~~g~~~~---~~~~~~~---l~~~G~iv~~ 281 (366)
T 1yqd_A 254 GIIDTVSAVHP---LLPLFGL---LKSHGKLILV 281 (366)
T ss_dssp EEEECCSSCCC---SHHHHHH---EEEEEEEEEC
T ss_pred EEEECCCcHHH---HHHHHHH---HhcCCEEEEE
Confidence 99876553321 3455677 8999988763
No 381
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.11 E-value=0.23 Score=46.27 Aligned_cols=59 Identities=15% Similarity=0.099 Sum_probs=42.9
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 184 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l 184 (282)
.-+++|+-||.|++++-+..+ +. .|.++|+++.+.+.-+.|+. ......++++|+.+..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhhh
Confidence 358999999999999888764 33 48999999987776666552 1122456778887654
No 382
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.90 E-value=0.084 Score=46.20 Aligned_cols=96 Identities=15% Similarity=0.209 Sum_probs=59.0
Q ss_pred cCCC-EEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch-hhHHHHHHhCCCC
Q 023411 118 LGAQ-RCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA-ADSLKALILNGEA 193 (282)
Q Consensus 118 ~~~~-~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~-~~~l~~l~~~~~~ 193 (282)
.+++ +||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|... + +-..+. .+....+ ..
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~-~-i~~~~~~~~~~~~~----~~ 214 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGAKE-V-LAREDVMAERIRPL----DK 214 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTCSE-E-EECC---------C----CS
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCCcE-E-EecCCcHHHHHHHh----cC
Confidence 3443 7999997 5677788888876 4789999999888777654 45432 1 111111 1111111 13
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+.+|+||-..... .++...++ ++++|.++.=.
T Consensus 215 ~~~d~vid~~g~~----~~~~~~~~---l~~~G~~v~~G 246 (328)
T 1xa0_A 215 QRWAAAVDPVGGR----TLATVLSR---MRYGGAVAVSG 246 (328)
T ss_dssp CCEEEEEECSTTT----THHHHHHT---EEEEEEEEECS
T ss_pred CcccEEEECCcHH----HHHHHHHh---hccCCEEEEEe
Confidence 5799988655432 35667777 99999988743
No 383
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=92.55 E-value=0.49 Score=41.85 Aligned_cols=107 Identities=12% Similarity=0.119 Sum_probs=59.6
Q ss_pred hhcCC-CEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEE---cchhhHHHHHHh
Q 023411 116 QILGA-QRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH---GLAADSLKALIL 189 (282)
Q Consensus 116 ~~~~~-~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~---gd~~~~l~~l~~ 189 (282)
...++ ++||-+|+ +.|..++.+++.. +++++++..+++.++..++.++..|.+.-+.... .+..+.+..+..
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhh
Confidence 34567 89999886 4677788888876 4788888766554222223344556542111110 122222222210
Q ss_pred CCCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 190 NGEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 190 ~~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
++ ...+|+||-..... ... ...++ |+++|.++.=.
T Consensus 241 ~~-~~g~Dvvid~~G~~---~~~-~~~~~---l~~~G~~v~~g 275 (364)
T 1gu7_A 241 QS-GGEAKLALNCVGGK---SST-GIARK---LNNNGLMLTYG 275 (364)
T ss_dssp HH-TCCEEEEEESSCHH---HHH-HHHHT---SCTTCEEEECC
T ss_pred cc-CCCceEEEECCCch---hHH-HHHHH---hccCCEEEEec
Confidence 00 35799998655432 122 45577 99999988743
No 384
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.51 E-value=1.3 Score=32.77 Aligned_cols=95 Identities=18% Similarity=0.123 Sum_probs=53.8
Q ss_pred CEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
.+|+=+|+ |..+..++..+. .+.+|+.+|.+++..+..++. .+ +.++.+|..+. ..+.... ...+|+|
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~----~~~~~~d~~~~-~~l~~~~-~~~~d~v 73 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID----ALVINGDCTKI-KTLEDAG-IEDADMY 73 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS----SEEEESCTTSH-HHHHHTT-TTTCSEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC----cEEEEcCCCCH-HHHHHcC-cccCCEE
Confidence 47888876 666666666542 246899999988765543321 12 45677776432 1111111 2578999
Q ss_pred EEcCCccccHHHHHHHHHhhcCCCCCcEEE
Q 023411 200 FVDAEKRMYQEYFELLLQLLLQIRVGGIIV 229 (282)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~~~~LkpgG~lv 229 (282)
++..........+..+.+. +.++-+++
T Consensus 74 i~~~~~~~~~~~~~~~~~~---~~~~~ii~ 100 (140)
T 1lss_A 74 IAVTGKEEVNLMSSLLAKS---YGINKTIA 100 (140)
T ss_dssp EECCSCHHHHHHHHHHHHH---TTCCCEEE
T ss_pred EEeeCCchHHHHHHHHHHH---cCCCEEEE
Confidence 9876543333333344444 67764443
No 385
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.34 E-value=0.32 Score=43.10 Aligned_cols=98 Identities=17% Similarity=0.217 Sum_probs=60.7
Q ss_pred hhc-CCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QIL-GAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~-~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
... ++++||-+|+| .|..+..+++.. +++|++++.+++..+.+++ ..|.+. ++..+-.+.+..+ .
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~~~~~-----~ 242 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGADD---YVIGSDQAKMSEL-----A 242 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCCSC---EEETTCHHHHHHS-----T
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCCce---eeccccHHHHHHh-----c
Confidence 344 77899999976 356667777765 4799999999887666542 344432 2221112222222 2
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
+.+|+||-....... ++...++ |+++|.++.=.
T Consensus 243 ~g~D~vid~~g~~~~---~~~~~~~---l~~~G~iv~~G 275 (357)
T 2cf5_A 243 DSLDYVIDTVPVHHA---LEPYLSL---LKLDGKLILMG 275 (357)
T ss_dssp TTEEEEEECCCSCCC---SHHHHTT---EEEEEEEEECS
T ss_pred CCCCEEEECCCChHH---HHHHHHH---hccCCEEEEeC
Confidence 579999865543321 3445567 99999988743
No 386
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.27 E-value=0.59 Score=41.94 Aligned_cols=94 Identities=12% Similarity=0.088 Sum_probs=62.2
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCC-cEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
+.+||.|+.+.|..+++++.. .++.+.-|--....++.|+..+++.+ .+++... .+. . ...||+
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~---~-----~~~~~~ 103 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TAD---Y-----PQQPGV 103 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TSC---C-----CSSCSE
T ss_pred CCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--ccc---c-----ccCCCE
Confidence 347999999999999988753 23555333334456678899998875 3666532 221 1 578999
Q ss_pred EEEcCCcc--ccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 199 AFVDAEKR--MYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 199 V~id~~~~--~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
|++.-++. .....+..+... |++|+.|++-
T Consensus 104 v~~~lpk~~~~l~~~L~~l~~~---l~~~~~i~~~ 135 (375)
T 4dcm_A 104 VLIKVPKTLALLEQQLRALRKV---VTSDTRIIAG 135 (375)
T ss_dssp EEEECCSCHHHHHHHHHHHHTT---CCTTSEEEEE
T ss_pred EEEEcCCCHHHHHHHHHHHHhh---CCCCCEEEEE
Confidence 99876643 233345555555 9999988764
No 387
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.21 E-value=1.4 Score=31.36 Aligned_cols=74 Identities=23% Similarity=0.175 Sum_probs=47.5
Q ss_pred CCEEEEEcccccHHHHHHHHHCC-CC-CEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCc
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLP-ES-GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASS 195 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~-~~-~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~ 195 (282)
.++|+-+|+ |..+..++..+. .+ .+|+.+|.+++..+... ...+.++.+|..+. +... -..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~-----~~~ 69 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKA-----LGG 69 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHH-----TTT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHH-----HcC
Confidence 357888998 666666665542 23 58999999987655443 12366777777542 2333 257
Q ss_pred eeEEEEcCCcccc
Q 023411 196 YDFAFVDAEKRMY 208 (282)
Q Consensus 196 fDlV~id~~~~~~ 208 (282)
+|+||...+....
T Consensus 70 ~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 70 FDAVISAAPFFLT 82 (118)
T ss_dssp CSEEEECSCGGGH
T ss_pred CCEEEECCCchhh
Confidence 8999987764443
No 388
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=91.88 E-value=0.27 Score=45.00 Aligned_cols=49 Identities=16% Similarity=0.166 Sum_probs=39.4
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCC----CCCEEEEEecCccHHHHHHHHHHH
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLP----ESGCLVACERDARSLEVAKKYYER 166 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~----~~~~v~~iD~s~~~~~~a~~~~~~ 166 (282)
..+-.|+|+|.|+|....-+++.+. ...+++.||+|+...+.-++.+..
T Consensus 136 ~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 136 SGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred cCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 3467999999999999888776542 124899999999998888888765
No 389
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.80 E-value=0.66 Score=34.86 Aligned_cols=72 Identities=10% Similarity=0.119 Sum_probs=46.7
Q ss_pred CEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
++|+=+|+ |.++..+++.+. .+.+|+++|.+++.++.+++ .+ +.++.+|..+.. .+..-+ ...+|.|
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~-~l~~~~-~~~~d~v 74 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG----FDAVIADPTDES-FYRSLD-LEGVSAV 74 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEECCTTCHH-HHHHSC-CTTCSEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC----CcEEECCCCCHH-HHHhCC-cccCCEE
Confidence 47888887 556666666553 24689999999987665543 22 678888886531 111111 3578999
Q ss_pred EEcCC
Q 023411 200 FVDAE 204 (282)
Q Consensus 200 ~id~~ 204 (282)
++..+
T Consensus 75 i~~~~ 79 (141)
T 3llv_A 75 LITGS 79 (141)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 88655
No 390
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.74 E-value=0.14 Score=44.50 Aligned_cols=89 Identities=13% Similarity=0.090 Sum_probs=57.3
Q ss_pred hhcCCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 116 QILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 116 ~~~~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
...++++||-+|+| .|..+..+++.. +++|++++ +++..+.+++ .|.+ .++ .| . ..+ ..
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~-~d-~---~~v-----~~ 198 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAK----RGVR---HLY-RE-P---SQV-----TQ 198 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHH----HTEE---EEE-SS-G---GGC-----CS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHH----cCCC---EEE-cC-H---HHh-----CC
Confidence 34578899999996 377788888876 47999999 9988887765 3432 222 23 1 122 36
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+|+||-...... +..+.++ |+++|.++.=
T Consensus 199 g~Dvv~d~~g~~~----~~~~~~~---l~~~G~~v~~ 228 (315)
T 3goh_A 199 KYFAIFDAVNSQN----AAALVPS---LKANGHIICI 228 (315)
T ss_dssp CEEEEECC-----------TTGGG---EEEEEEEEEE
T ss_pred CccEEEECCCchh----HHHHHHH---hcCCCEEEEE
Confidence 8999884433221 2345566 9999988764
No 391
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.67 E-value=0.14 Score=44.70 Aligned_cols=91 Identities=14% Similarity=0.090 Sum_probs=59.7
Q ss_pred EEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 122 RCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 122 ~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
+||-+|+ +.|..+..+++.. +++|++++.+++..+.+++ .|.+. ++.....+. . .....+.+|+|
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~---~-~~~~~~~~d~v 215 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGANR---ILSRDEFAE---S-RPLEKQLWAGA 215 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCSE---EEEGGGSSC---C-CSSCCCCEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCE---EEecCCHHH---H-HhhcCCCccEE
Confidence 4998886 4688888899886 4799999999998887765 35332 221111111 1 11113679988
Q ss_pred EEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 200 FVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
|-.... ..++.+.++ |+++|.++.=.
T Consensus 216 ~d~~g~----~~~~~~~~~---l~~~G~iv~~G 241 (324)
T 3nx4_A 216 IDTVGD----KVLAKVLAQ---MNYGGCVAACG 241 (324)
T ss_dssp EESSCH----HHHHHHHHT---EEEEEEEEECC
T ss_pred EECCCc----HHHHHHHHH---HhcCCEEEEEe
Confidence 754432 257777788 99999988743
No 392
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=91.61 E-value=0.17 Score=44.71 Aligned_cols=99 Identities=12% Similarity=0.103 Sum_probs=55.8
Q ss_pred HhhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCC
Q 023411 115 VQILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (282)
Q Consensus 115 ~~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~ 192 (282)
....++++||-+|+ +.|..+..+++... ..+|++++ +++..+.++ .|...-+. ...+..+.+..+ .
T Consensus 138 ~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~~~~~~~~~---~- 205 (349)
T 4a27_A 138 ANLREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVTHLFD-RNADYVQEVKRI---S- 205 (349)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSCHHHHHHHH---C-
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCccHHHHHHHh---c-
Confidence 34567889999998 34667777777654 46899988 555444433 34432111 112222222222 1
Q ss_pred CCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 193 ASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 193 ~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+.+|+||-...... ++.+.++ |+++|.+++-.
T Consensus 206 ~~g~Dvv~d~~g~~~----~~~~~~~---l~~~G~~v~~G 238 (349)
T 4a27_A 206 AEGVDIVLDCLCGDN----TGKGLSL---LKPLGTYILYG 238 (349)
T ss_dssp TTCEEEEEEECC-----------CTT---EEEEEEEEEEC
T ss_pred CCCceEEEECCCchh----HHHHHHH---hhcCCEEEEEC
Confidence 468999986554332 2455566 99999988643
No 393
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.48 E-value=0.6 Score=41.57 Aligned_cols=96 Identities=15% Similarity=0.137 Sum_probs=55.5
Q ss_pred CCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 119 GAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 119 ~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
++++|+=+|+| .|..+..++... +++|+.+|.+++.++.+++.... .+..+..+..+....+ ..+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~------~~~D 232 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAV------AEAD 232 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHH------HTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHH------cCCC
Confidence 45899999985 233445555555 36999999999888777665431 2333322322222222 3689
Q ss_pred EEEEcCCcccc--HH-HHHHHHHhhcCCCCCcEEEE
Q 023411 198 FAFVDAEKRMY--QE-YFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 198 lV~id~~~~~~--~~-~l~~~~~~~~~LkpgG~lv~ 230 (282)
+|+........ +. ..+...+. +++||+++-
T Consensus 233 vVI~~~~~~~~~~~~li~~~~~~~---~~~g~~ivd 265 (361)
T 1pjc_A 233 LLIGAVLVPGRRAPILVPASLVEQ---MRTGSVIVD 265 (361)
T ss_dssp EEEECCCCTTSSCCCCBCHHHHTT---SCTTCEEEE
T ss_pred EEEECCCcCCCCCCeecCHHHHhh---CCCCCEEEE
Confidence 99865432210 00 12334456 899987664
No 394
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.12 E-value=0.42 Score=42.44 Aligned_cols=94 Identities=12% Similarity=0.111 Sum_probs=57.9
Q ss_pred CCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCc---cHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 120 AQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDA---RSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 120 ~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~---~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
+++||-+|+|. |..+..+++.. +++|++++.++ +..+.+++ .|.. .+. ..+..+.+... .+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga~-~v~--~~~~~~~~~~~-----~~~ 246 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKTN-YYN--SSNGYDKLKDS-----VGK 246 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTCE-EEE--CTTCSHHHHHH-----HCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCCc-eec--hHHHHHHHHHh-----CCC
Confidence 78999999842 45556666655 46999999988 66665543 3432 121 11222222221 257
Q ss_pred eeEEEEcCCccccHHHH-HHHHHhhcCCCCCcEEEEeCC
Q 023411 196 YDFAFVDAEKRMYQEYF-ELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 196 fDlV~id~~~~~~~~~l-~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+|+||....... .+ +.+.++ |+++|.++.=..
T Consensus 247 ~d~vid~~g~~~---~~~~~~~~~---l~~~G~iv~~g~ 279 (366)
T 2cdc_A 247 FDVIIDATGADV---NILGNVIPL---LGRNGVLGLFGF 279 (366)
T ss_dssp EEEEEECCCCCT---HHHHHHGGG---EEEEEEEEECSC
T ss_pred CCEEEECCCChH---HHHHHHHHH---HhcCCEEEEEec
Confidence 999987655332 24 666777 999999887443
No 395
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.98 E-value=2.2 Score=34.95 Aligned_cols=96 Identities=18% Similarity=0.112 Sum_probs=59.1
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
..+|+=+|+ |..+..+++.+...+.|+.+|.+++.++.++ . .+.++.+|+.+. ..+...+ -...|.|
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~-~~l~~a~-i~~ad~v 75 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----S----GANFVHGDPTRV-SDLEKAN-VRGARAV 75 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T----TCEEEESCTTCH-HHHHHTT-CTTCSEE
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c----CCeEEEcCCCCH-HHHHhcC-cchhcEE
Confidence 457888876 7888888888864334999999988665433 1 278899998653 1221111 3678998
Q ss_pred EEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 200 FVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
++...............+- +.|+..+++.
T Consensus 76 i~~~~~d~~n~~~~~~a~~---~~~~~~iia~ 104 (234)
T 2aef_A 76 IVDLESDSETIHCILGIRK---IDESVRIIAE 104 (234)
T ss_dssp EECCSCHHHHHHHHHHHHH---HCSSSEEEEE
T ss_pred EEcCCCcHHHHHHHHHHHH---HCCCCeEEEE
Confidence 8865543322223333333 6777666664
No 396
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.83 E-value=0.6 Score=41.90 Aligned_cols=98 Identities=13% Similarity=0.151 Sum_probs=55.1
Q ss_pred cCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
.++++|+=+|+|. |.....++..+ +.+|+++|.+++.++.+++.+ |.. +.....+..+ +.... ...
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~---g~~--~~~~~~~~~~-l~~~l-----~~a 232 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEF---CGR--IHTRYSSAYE-LEGAV-----KRA 232 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TTS--SEEEECCHHH-HHHHH-----HHC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhc---CCe--eEeccCCHHH-HHHHH-----cCC
Confidence 4678999999852 33344455554 469999999998776665433 322 2222222222 22221 467
Q ss_pred eEEEEcCCccc--cHH-HHHHHHHhhcCCCCCcEEEEe
Q 023411 197 DFAFVDAEKRM--YQE-YFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 197 DlV~id~~~~~--~~~-~l~~~~~~~~~LkpgG~lv~d 231 (282)
|+|+....... ... ..+...+. ++|||+++-=
T Consensus 233 DvVi~~~~~p~~~t~~li~~~~l~~---mk~g~~iV~v 267 (377)
T 2vhw_A 233 DLVIGAVLVPGAKAPKLVSNSLVAH---MKPGAVLVDI 267 (377)
T ss_dssp SEEEECCCCTTSCCCCCBCHHHHTT---SCTTCEEEEG
T ss_pred CEEEECCCcCCCCCcceecHHHHhc---CCCCcEEEEE
Confidence 99987433111 111 12345556 8999987653
No 397
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=90.61 E-value=0.66 Score=40.81 Aligned_cols=97 Identities=10% Similarity=0.041 Sum_probs=56.8
Q ss_pred CEEEEE-ccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 121 QRCIEV-GVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 121 ~~VLEI-G~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
++||=. |+| .|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+..... ...+|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~~---~~g~D~ 236 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAAHVLNEKAPDFEATLREVMK---AEQPRI 236 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCSEEEETTSTTHHHHHHHHHH---HHCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCcHHHHHHHHHHhc---CCCCcE
Confidence 566643 332 455666677765 4799999999998877764 34331111111222222222210 247999
Q ss_pred EEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 199 AFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 199 V~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
||-..... .++.+.++ |+++|.++.=..
T Consensus 237 vid~~g~~----~~~~~~~~---l~~~G~iv~~G~ 264 (349)
T 3pi7_A 237 FLDAVTGP----LASAIFNA---MPKRARWIIYGR 264 (349)
T ss_dssp EEESSCHH----HHHHHHHH---SCTTCEEEECCC
T ss_pred EEECCCCh----hHHHHHhh---hcCCCEEEEEec
Confidence 98655532 24567777 999999987443
No 398
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.51 E-value=1.4 Score=34.56 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=54.9
Q ss_pred CCEEEEEcccccHHHHHHHHHCC-C-CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLP-E-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~-~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
..+|+=+|+ |..+..+++.+. . +.+|+++|.+++..+.+++ .| +.++.+|..+. ..+..-.....+|
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~-~~l~~~~~~~~ad 107 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDP-DFWERILDTGHVK 107 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCH-HHHHTBCSCCCCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCH-HHHHhccCCCCCC
Confidence 447888886 566666665543 2 4579999999877655432 23 45677776542 1121110135789
Q ss_pred EEEEcCCccc-cHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKRM-YQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~~-~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+|++...... .......+. . +.|++.+++.
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~-~---~~~~~~ii~~ 138 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQ-R---RNYKGQIAAI 138 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHH-H---TTCCSEEEEE
T ss_pred EEEEeCCChHHHHHHHHHHH-H---HCCCCEEEEE
Confidence 9988554322 222233333 3 5677777763
No 399
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=90.44 E-value=3.4 Score=34.49 Aligned_cols=83 Identities=14% Similarity=0.132 Sum_probs=53.9
Q ss_pred CCCEEEEEccccc-HHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--H----HHHHhC
Q 023411 119 GAQRCIEVGVYTG-YSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--L----KALILN 190 (282)
Q Consensus 119 ~~~~VLEIG~G~G-~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l----~~l~~~ 190 (282)
.++++|-.|++++ .++..+++.+ ..+++|+.++.+++.++.+.+.++..+-. ++.++++|..+. . ......
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQP-EAHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCS-SCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5778898886431 2444444433 13689999999999888888877765533 578888887542 1 111111
Q ss_pred CCCCceeEEEEcCC
Q 023411 191 GEASSYDFAFVDAE 204 (282)
Q Consensus 191 ~~~~~fDlV~id~~ 204 (282)
-++.|.++.++.
T Consensus 84 --~G~iD~lvnnAg 95 (256)
T 4fs3_A 84 --VGNIDGVYHSIA 95 (256)
T ss_dssp --HCCCSEEEECCC
T ss_pred --hCCCCEEEeccc
Confidence 378999987643
No 400
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.31 E-value=4.1 Score=34.68 Aligned_cols=84 Identities=18% Similarity=0.118 Sum_probs=51.6
Q ss_pred cCCCEEEEEccccc-HHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--
Q 023411 118 LGAQRCIEVGVYTG-YSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-- 191 (282)
Q Consensus 118 ~~~~~VLEIG~G~G-~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~-- 191 (282)
..++++|-.|++.| .++..+++.+ ..+.+|+.++.++...+.+++..+..+ ++.++.+|..+. ...+.+.-
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 45678998887633 2444444443 235799999998766565555555443 488899987653 22221100
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
..+.+|+++..+.
T Consensus 106 ~~g~iD~lVnnAG 118 (293)
T 3grk_A 106 KWGKLDFLVHAIG 118 (293)
T ss_dssp HTSCCSEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 0258999998765
No 401
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.11 E-value=1.3 Score=39.57 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=54.5
Q ss_pred cCCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
.++++|+-+|+| .|.....++... +.+|+++|.+++.++.+++.+ +. .+.....+..+ +.... ..+
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~-l~~~~-----~~~ 230 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEAN-IKKSV-----QHA 230 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHH-HHHHH-----HHC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHH-HHHHH-----hCC
Confidence 356899999984 233333344444 479999999988766554422 32 23333223322 22321 468
Q ss_pred eEEEEcCCccc--cHH-HHHHHHHhhcCCCCCcEEEEeC
Q 023411 197 DFAFVDAEKRM--YQE-YFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 197 DlV~id~~~~~--~~~-~l~~~~~~~~~LkpgG~lv~dd 232 (282)
|+|+....... ... ..+...+. +++||+++.-.
T Consensus 231 DvVi~~~g~~~~~~~~li~~~~l~~---mk~gg~iV~v~ 266 (369)
T 2eez_A 231 DLLIGAVLVPGAKAPKLVTRDMLSL---MKEGAVIVDVA 266 (369)
T ss_dssp SEEEECCC-------CCSCHHHHTT---SCTTCEEEECC
T ss_pred CEEEECCCCCccccchhHHHHHHHh---hcCCCEEEEEe
Confidence 99987655321 111 13445566 89999876543
No 402
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.98 E-value=2.2 Score=32.45 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=56.7
Q ss_pred CEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCc-cHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCce
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDA-RSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSY 196 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~-~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~f 196 (282)
++|+=+|+ |..+..+++.+. .+.+|+.+|.++ +..+..++.. ...+.++.||..+. +... + -...
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a---~-i~~a 72 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA---G-IDRC 72 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH---T-TTTC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc---C-hhhC
Confidence 46777775 777777776653 246899999974 4443333322 12378899998653 2222 1 3678
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|.|++...............+. +.|...+++
T Consensus 73 d~vi~~~~~d~~n~~~~~~a~~---~~~~~~ii~ 103 (153)
T 1id1_A 73 RAILALSDNDADNAFVVLSAKD---MSSDVKTVL 103 (153)
T ss_dssp SEEEECSSCHHHHHHHHHHHHH---HTSSSCEEE
T ss_pred CEEEEecCChHHHHHHHHHHHH---HCCCCEEEE
Confidence 9998875544333333333344 566666665
No 403
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.54 E-value=3.6 Score=35.10 Aligned_cols=83 Identities=13% Similarity=0.057 Sum_probs=52.2
Q ss_pred CCCEEEEEcccc-cHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYT-GYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~-G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.++++|-.|++. ..++..+++.+ ..+.+|+.++.+++..+.+++..+..+ ++.++.+|..+. ...+.+.- .
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899888753 24555555544 236799999999877766666665544 367888887652 12221100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+.+|+++..+.
T Consensus 106 ~g~iD~lVnnAG 117 (296)
T 3k31_A 106 WGSLDFVVHAVA 117 (296)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899998764
No 404
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.45 E-value=1.6 Score=33.39 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=54.8
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
.+..+|+=+|+ |..+..+++.+. .+.+|+.+|.+++.++.+++ . ..+.++.+|..+. ..+...+ ...+
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~-~~l~~~~-~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEF-ETLKECG-MEKA 85 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSH-HHHHTTT-GGGC
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCH-HHHHHcC-cccC
Confidence 35678999987 566665555442 24689999999876543221 1 1245667776432 2221111 2578
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|+||+.............+.+. +.+...++.
T Consensus 86 d~Vi~~~~~~~~~~~~~~~~~~---~~~~~~iv~ 116 (155)
T 2g1u_A 86 DMVFAFTNDDSTNFFISMNARY---MFNVENVIA 116 (155)
T ss_dssp SEEEECSSCHHHHHHHHHHHHH---TSCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHH---HCCCCeEEE
Confidence 9999876543333333333333 455555555
No 405
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=89.19 E-value=1.6 Score=42.96 Aligned_cols=59 Identities=10% Similarity=-0.001 Sum_probs=40.7
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCC---C-CEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPE---S-GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~---~-~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (282)
+..+|||+-||.|+++.-+.++... . -.+.++|+++.+++.-+.|+. ...++++|..+.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp------~~~~~~~di~~i 273 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP------QTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT------TSEEEESCHHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC------CCceecCcHHHh
Confidence 3458999999999998887765210 0 147899999988877666642 245566666544
No 406
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.17 E-value=1.2 Score=36.19 Aligned_cols=93 Identities=17% Similarity=0.108 Sum_probs=57.0
Q ss_pred EEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCceeE
Q 023411 122 RCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYDF 198 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~fDl 198 (282)
+|+=+|+ |..+..+++.+. .+..|+.+|.+++.++...+. . .+.++.+|+.+. +... + -...|+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a---~-i~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDA---E-VSKNDV 68 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHH---T-CCTTCE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhc---C-cccCCE
Confidence 4666675 777777776653 246899999999876544322 1 267899998753 2222 1 367899
Q ss_pred EEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 199 AFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 199 V~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|++...............+. +.+...+++
T Consensus 69 vi~~~~~d~~n~~~~~~a~~---~~~~~~iia 97 (218)
T 3l4b_C 69 VVILTPRDEVNLFIAQLVMK---DFGVKRVVS 97 (218)
T ss_dssp EEECCSCHHHHHHHHHHHHH---TSCCCEEEE
T ss_pred EEEecCCcHHHHHHHHHHHH---HcCCCeEEE
Confidence 98876544433334444443 556666655
No 407
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.13 E-value=0.73 Score=41.00 Aligned_cols=97 Identities=12% Similarity=0.119 Sum_probs=58.2
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 117 ILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 117 ~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
..++++||-+|+ |.|..+..+++.. +++|++++ +++..+.++ ..|.+ .++..+..+....+.. ..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~----~lGa~---~v~~~~~~~~~~~~~~---~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVR----KLGAD---DVIDYKSGSVEEQLKS---LK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH----HTTCS---EEEETTSSCHHHHHHT---SC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHH----HcCCC---EEEECCchHHHHHHhh---cC
Confidence 457789999983 4577788888876 47999998 666665553 34543 2222221223233321 25
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.+|+||-...... ..++...++ |++||.++.=
T Consensus 248 g~D~vid~~g~~~--~~~~~~~~~---l~~~G~iv~~ 279 (375)
T 2vn8_A 248 PFDFILDNVGGST--ETWAPDFLK---KWSGATYVTL 279 (375)
T ss_dssp CBSEEEESSCTTH--HHHGGGGBC---SSSCCEEEES
T ss_pred CCCEEEECCCChh--hhhHHHHHh---hcCCcEEEEe
Confidence 7999986554321 123344455 9999998873
No 408
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.78 E-value=0.83 Score=41.00 Aligned_cols=42 Identities=24% Similarity=0.274 Sum_probs=31.5
Q ss_pred CCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHH
Q 023411 119 GAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKK 162 (282)
Q Consensus 119 ~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~ 162 (282)
++.+|+=+|+|. |..+..++..++ .+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 678999999873 445566666664 689999999887766543
No 409
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=88.67 E-value=0.98 Score=39.17 Aligned_cols=97 Identities=11% Similarity=0.034 Sum_probs=60.1
Q ss_pred HHHhhcCCCEEEEEc-cc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC
Q 023411 113 MLVQILGAQRCIEVG-VY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 190 (282)
Q Consensus 113 ~l~~~~~~~~VLEIG-~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~ 190 (282)
..+...++++||-+| +| .|..+..+++.. +++|++++ +++..+.+ +..|.+. ++..+..+.....
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~----~~lGa~~---~i~~~~~~~~~~~--- 212 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFL----KALGAEQ---CINYHEEDFLLAI--- 212 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHH----HHHTCSE---EEETTTSCHHHHC---
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHH----HHcCCCE---EEeCCCcchhhhh---
Confidence 344567888999986 44 577888888876 47999987 44444444 4456542 2322222212221
Q ss_pred CCCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 191 GEASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 191 ~~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
...+|+||-..... .++...++ |+++|.++.-
T Consensus 213 --~~g~D~v~d~~g~~----~~~~~~~~---l~~~G~iv~~ 244 (321)
T 3tqh_A 213 --STPVDAVIDLVGGD----VGIQSIDC---LKETGCIVSV 244 (321)
T ss_dssp --CSCEEEEEESSCHH----HHHHHGGG---EEEEEEEEEC
T ss_pred --ccCCCEEEECCCcH----HHHHHHHh---ccCCCEEEEe
Confidence 25799998655432 23566677 9999998874
No 410
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=88.66 E-value=2 Score=37.49 Aligned_cols=96 Identities=17% Similarity=0.093 Sum_probs=59.0
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
.++|+=+|+ |..+..+++.+...+.|+.+|.+++.++ +++ ..+.++.||+.+. ..+...+ -+..|.+
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~-~~L~~a~-i~~a~~v 181 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR--------SGANFVHGDPTRV-SDLEKAN-VRGARAV 181 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH--------TTCEEEESCTTSH-HHHHHTC-STTEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh--------CCcEEEEeCCCCH-HHHHhcC-hhhccEE
Confidence 347887775 7888888887753344999999998776 442 1378999998753 2222222 4678998
Q ss_pred EEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 200 FVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
++....+...-..-...+- +.|...+++.
T Consensus 182 i~~~~~d~~n~~~~~~ar~---~~~~~~iiar 210 (336)
T 1lnq_A 182 IVDLESDSETIHCILGIRK---IDESVRIIAE 210 (336)
T ss_dssp EECCSSHHHHHHHHHHHHT---TCTTSEEEEE
T ss_pred EEcCCccHHHHHHHHHHHH---HCCCCeEEEE
Confidence 8765533222222222233 6777666653
No 411
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.33 E-value=0.12 Score=45.26 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=59.5
Q ss_pred cCCC-EEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQ-RCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~-~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
.+++ +||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|... ++ |..+...........+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~---v~--~~~~~~~~~~~~~~~~ 216 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGASE---VI--SREDVYDGTLKALSKQ 216 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTCSE---EE--EHHHHCSSCCCSSCCC
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcE---EE--ECCCchHHHHHHhhcC
Confidence 3443 7999996 4677778888776 4789999999888877754 34331 22 1111100000001134
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
.+|+||-.... ..++...++ +++||.++.=.
T Consensus 217 ~~d~vid~~g~----~~~~~~~~~---l~~~G~iv~~G 247 (330)
T 1tt7_A 217 QWQGAVDPVGG----KQLASLLSK---IQYGGSVAVSG 247 (330)
T ss_dssp CEEEEEESCCT----HHHHHHHTT---EEEEEEEEECC
T ss_pred CccEEEECCcH----HHHHHHHHh---hcCCCEEEEEe
Confidence 79998865543 246667777 99999988743
No 412
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.18 E-value=2.8 Score=36.25 Aligned_cols=85 Identities=12% Similarity=0.012 Sum_probs=57.9
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.+++||-.|++ |+++..+++.+ ..+.+|+.++.+++.++.+.+.+...+...++.++.+|..+. +..+...- ..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 45688888865 55666666655 236799999999998888877777666544799999998653 11111100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|++|..+.
T Consensus 86 g~id~lv~nAg 96 (319)
T 3ioy_A 86 GPVSILCNNAG 96 (319)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 67899998765
No 413
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=88.01 E-value=0.95 Score=40.82 Aligned_cols=53 Identities=15% Similarity=0.074 Sum_probs=38.5
Q ss_pred CEEEEEcccccHHHHHHHHHCC------CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP------ESGCLVACERDARSLEVAKKYYERAGVSHKVKIK 176 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~ 176 (282)
-.|+|+|.|+|..+.-+++.+. ...+++.||+|+...+.-++.+... +++++.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~---~~v~W~ 140 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI---RNIHWH 140 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC---SSEEEE
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC---CCeEEe
Confidence 3799999999999888876542 1358999999998877666655432 146554
No 414
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.74 E-value=6.8 Score=31.29 Aligned_cols=70 Identities=16% Similarity=0.061 Sum_probs=48.0
Q ss_pred EEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEE
Q 023411 122 RCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~ 200 (282)
+||=+| |+|..+..+++.+- .+.+|++++.+++..+. . .+++++.+|..+....+... -..+|.||
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~-~~~~~~~~D~~d~~~~~~~~--~~~~d~vi 68 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------Y-NNVKAVHFDVDWTPEEMAKQ--LHGMDAII 68 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------C-TTEEEEECCTTSCHHHHHTT--TTTCSEEE
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------c-CCceEEEecccCCHHHHHHH--HcCCCEEE
Confidence 577677 47888888888774 34699999998764321 1 46999999987612222221 35789999
Q ss_pred EcCC
Q 023411 201 VDAE 204 (282)
Q Consensus 201 id~~ 204 (282)
..+.
T Consensus 69 ~~ag 72 (219)
T 3dqp_A 69 NVSG 72 (219)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 8765
No 415
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.51 E-value=0.96 Score=40.70 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=32.5
Q ss_pred CCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHH
Q 023411 119 GAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKK 162 (282)
Q Consensus 119 ~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~ 162 (282)
++.+|+=||+| .|..+..++..+ +++|+++|.+++.++.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 67899999998 355566666666 4799999999988777654
No 416
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.44 E-value=5.1 Score=34.69 Aligned_cols=89 Identities=11% Similarity=0.005 Sum_probs=52.8
Q ss_pred CEEEEEcccccHHHHHHHHHCCC-C-CEEEEEecCcc---HHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHHhCCCCC
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPE-S-GCLVACERDAR---SLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEAS 194 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~-~-~~v~~iD~s~~---~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~l~~~~~~~ 194 (282)
.+|.=||+ |..+..++..+.. + .+|+++|.+++ ..+...+.+...|. .. +..+. -.
T Consensus 25 m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~---------~~ 86 (317)
T 4ezb_A 25 TTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAG---------IA 86 (317)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGG---------GG
T ss_pred CeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHH---------Hh
Confidence 47888886 5566666655432 4 58999999973 22222233333342 22 33332 14
Q ss_pred ceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 195 SYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
..|+||+..+.......++.+.+. +++|.++|-
T Consensus 87 ~aDvVi~avp~~~~~~~~~~i~~~---l~~~~ivv~ 119 (317)
T 4ezb_A 87 CADVVLSLVVGAATKAVAASAAPH---LSDEAVFID 119 (317)
T ss_dssp GCSEEEECCCGGGHHHHHHHHGGG---CCTTCEEEE
T ss_pred cCCEEEEecCCHHHHHHHHHHHhh---cCCCCEEEE
Confidence 569999887766555556666666 888766554
No 417
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.44 E-value=3.1 Score=35.46 Aligned_cols=82 Identities=26% Similarity=0.207 Sum_probs=52.3
Q ss_pred hcCCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--
Q 023411 117 ILGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-- 191 (282)
Q Consensus 117 ~~~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~-- 191 (282)
...++.+|--|.+.| ++..+++.+. .+++|+.+|.+++.++.+.+.+ + .++..+.+|..+. ...+.+.-
T Consensus 26 rL~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 26 RLNAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TTTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhCCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 356788888887655 5666666552 3689999999988776554433 3 3577888887542 11111110
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
.-++.|+++.++.
T Consensus 100 ~~G~iDiLVNNAG 112 (273)
T 4fgs_A 100 EAGRIDVLFVNAG 112 (273)
T ss_dssp HHSCEEEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1378999987754
No 418
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=87.37 E-value=6.6 Score=32.55 Aligned_cols=85 Identities=9% Similarity=-0.027 Sum_probs=51.7
Q ss_pred CCCEEEEEccccc-HHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYTG-YSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G-~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.++++|-.|++.| .++..+++.+ ..+.+|+.++.++...+.+++..+..+- .++.++.+|..+. ...+.+.- .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 4568888887522 2444444443 2367999999988777776666665442 2589999987652 12211100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+.+|.++..+.
T Consensus 85 ~g~id~li~~Ag 96 (266)
T 3oig_A 85 VGVIHGIAHCIA 96 (266)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCeeEEEEccc
Confidence 257899987654
No 419
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.30 E-value=10 Score=30.59 Aligned_cols=72 Identities=17% Similarity=0.102 Sum_probs=48.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcE-EEEEcchhhHHHHHHhCCCCCce
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKV-KIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v-~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
.+++||=.|+ +|..+..+++.+- .+.+|++++.+++..+.... ..+ +++.+|..+.+... -+.+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~-----~~~~ 85 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHA-----FASI 85 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGG-----GTTC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHH-----HcCC
Confidence 4668997775 6777777777652 35799999999876543322 147 88999986322222 2578
Q ss_pred eEEEEcCC
Q 023411 197 DFAFVDAE 204 (282)
Q Consensus 197 DlV~id~~ 204 (282)
|.||..+.
T Consensus 86 D~vi~~ag 93 (236)
T 3e8x_A 86 DAVVFAAG 93 (236)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99998765
No 420
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.19 E-value=2 Score=37.43 Aligned_cols=90 Identities=20% Similarity=0.196 Sum_probs=55.6
Q ss_pred CEEEEEcccccHHHHHHHHHCCC-CC--EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCcee
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPE-SG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~-~~--~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fD 197 (282)
.+|.=||+| ..+..++..+.. +. +|+++|.+++.++.+. ..|..+ . ...+..+. . -...|
T Consensus 34 ~kI~IIG~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~----~~G~~~--~-~~~~~~~~---~-----~~~aD 96 (314)
T 3ggo_A 34 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--E-GTTSIAKV---E-----DFSPD 96 (314)
T ss_dssp SEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--E-EESCTTGG---G-----GGCCS
T ss_pred CEEEEEeeC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----HCCCcc--h-hcCCHHHH---h-----hccCC
Confidence 578889975 444444433311 23 8999999998766554 334322 1 12233220 1 24679
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
+||+..+.......++.+.+. +++|.+ |+|
T Consensus 97 vVilavp~~~~~~vl~~l~~~---l~~~~i-v~d 126 (314)
T 3ggo_A 97 FVMLSSPVRTFREIAKKLSYI---LSEDAT-VTD 126 (314)
T ss_dssp EEEECSCGGGHHHHHHHHHHH---SCTTCE-EEE
T ss_pred EEEEeCCHHHHHHHHHHHhhc---cCCCcE-EEE
Confidence 999988877777788888887 888765 454
No 421
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.73 E-value=1.4 Score=40.14 Aligned_cols=95 Identities=18% Similarity=0.131 Sum_probs=57.8
Q ss_pred CEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
.+|+=+|+ |.++..+++.+. .+..|+.||.+++.++.+++ .| +.++.||+.+. ..+...+ -...|+|
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~-~~L~~ag-i~~A~~v 72 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRM-DLLESAG-AAKAEVL 72 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCH-HHHHHTT-TTTCSEE
T ss_pred CeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCH-HHHHhcC-CCccCEE
Confidence 46777776 556666665552 24689999999998876653 23 56788998763 1222212 3678998
Q ss_pred EEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 200 FVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
++...........-...+. +.|+..+++
T Consensus 73 iv~~~~~~~n~~i~~~ar~---~~p~~~Iia 100 (413)
T 3l9w_A 73 INAIDDPQTNLQLTEMVKE---HFPHLQIIA 100 (413)
T ss_dssp EECCSSHHHHHHHHHHHHH---HCTTCEEEE
T ss_pred EECCCChHHHHHHHHHHHH---hCCCCeEEE
Confidence 8766543322223333333 678766655
No 422
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=86.67 E-value=1.1 Score=39.51 Aligned_cols=101 Identities=13% Similarity=0.068 Sum_probs=54.4
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEE-EecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH-HHHHHhCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVA-CERDARSLEVAKKYYERAGVSHKVKIKHGLAADS-LKALILNG 191 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~-iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~-l~~l~~~~ 191 (282)
+..++++||-+|+ |.|..++.+++.. ++++++ ++.++... ...+.++..|.. .++. ..+. ...+....
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~-~~~~~~~~lGa~---~vi~--~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQ-KLSDRLKSLGAE---HVIT--EEELRRPEMKNFF 235 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHH-HHHHHHHHTTCS---EEEE--HHHHHSGGGGGTT
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchH-HHHHHHHhcCCc---EEEe--cCcchHHHHHHHH
Confidence 4567889999996 4677888888876 366554 44444321 112334455643 2222 1110 01111111
Q ss_pred CC-CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 192 EA-SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 192 ~~-~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
.. +.+|+||-..... . .....++ |++||.++.=
T Consensus 236 ~~~~~~Dvvid~~g~~---~-~~~~~~~---l~~~G~iv~~ 269 (357)
T 1zsy_A 236 KDMPQPRLALNCVGGK---S-STELLRQ---LARGGTMVTY 269 (357)
T ss_dssp SSSCCCSEEEESSCHH---H-HHHHHTT---SCTTCEEEEC
T ss_pred hCCCCceEEEECCCcH---H-HHHHHHh---hCCCCEEEEE
Confidence 01 2589988554422 1 2345566 9999998874
No 423
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=86.17 E-value=4.5 Score=35.73 Aligned_cols=81 Identities=14% Similarity=0.101 Sum_probs=51.7
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh--HHHHHHhCCCCCcee
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD--SLKALILNGEASSYD 197 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~--~l~~l~~~~~~~~fD 197 (282)
..+|+-+|| |..+..+++.+.+...|+.+|.+.+.++.+++ .++.+..|+.+ .+..+. ...|
T Consensus 16 ~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~~-----~~~D 79 (365)
T 3abi_A 16 HMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEVM-----KEFE 79 (365)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHHH-----TTCS
T ss_pred ccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHHH-----hCCC
Confidence 458999998 67777777777666889999999876654432 34556666644 333332 5679
Q ss_pred EEEEcCCccccHHHHHHHH
Q 023411 198 FAFVDAEKRMYQEYFELLL 216 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~ 216 (282)
+|+.-.++.......+.|.
T Consensus 80 vVi~~~p~~~~~~v~~~~~ 98 (365)
T 3abi_A 80 LVIGALPGFLGFKSIKAAI 98 (365)
T ss_dssp EEEECCCGGGHHHHHHHHH
T ss_pred EEEEecCCcccchHHHHHH
Confidence 9887655443333344443
No 424
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.89 E-value=3.8 Score=34.48 Aligned_cols=84 Identities=19% Similarity=0.114 Sum_probs=57.3
Q ss_pred cCCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--C
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.+++.+|--|.+.| ++..+++.+ ..+++|+.+|.+++.++.+.+.++..|. ++.++++|..+. ...+.+.- .
T Consensus 5 L~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36778888886655 566666554 2368999999999999888888887663 588999987652 11111110 1
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
-++.|+++.++.
T Consensus 82 ~G~iDiLVNNAG 93 (254)
T 4fn4_A 82 YSRIDVLCNNAG 93 (254)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 378999987654
No 425
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.81 E-value=3.7 Score=34.32 Aligned_cols=83 Identities=13% Similarity=0.035 Sum_probs=56.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCc
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASS 195 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~ 195 (282)
.++++|-.|+ +|.++..+++.+. .+.+|+.++.+++.++...+.+...+...++.++.+|..+. ...+.+. -+.
T Consensus 9 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~g~ 85 (267)
T 3t4x_A 9 KGKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK--YPK 85 (267)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH--CCC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh--cCC
Confidence 4567887775 4566666666552 36799999999988877777776655455688888887652 2222222 368
Q ss_pred eeEEEEcCC
Q 023411 196 YDFAFVDAE 204 (282)
Q Consensus 196 fDlV~id~~ 204 (282)
+|+++..+.
T Consensus 86 id~lv~nAg 94 (267)
T 3t4x_A 86 VDILINNLG 94 (267)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998754
No 426
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=85.74 E-value=1 Score=40.16 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=47.0
Q ss_pred cCCCEEEEEcccc---cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC
Q 023411 118 LGAQRCIEVGVYT---GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (282)
Q Consensus 118 ~~~~~VLEIG~G~---G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~ 194 (282)
.++++||-+|+|. |..++.+++.. +++|++++.+++..+.+++ .|.+.-+.....+..+.+..+.. ..
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~v~~~t~---~~ 239 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD--GIKLVNIVRKQEQADLLKA----QGAVHVCNAASPTFMQDLTEALV---ST 239 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHH----TTCSCEEETTSTTHHHHHHHHHH---HH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCCcEEEeCCChHHHHHHHHHhc---CC
Confidence 5778899885444 55566677765 4789999999988777664 45443222222233332222211 23
Q ss_pred ceeEEEEcCCc
Q 023411 195 SYDFAFVDAEK 205 (282)
Q Consensus 195 ~fDlV~id~~~ 205 (282)
.+|+||-....
T Consensus 240 g~d~v~d~~g~ 250 (379)
T 3iup_A 240 GATIAFDATGG 250 (379)
T ss_dssp CCCEEEESCEE
T ss_pred CceEEEECCCc
Confidence 69998865443
No 427
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.71 E-value=4 Score=34.40 Aligned_cols=88 Identities=17% Similarity=0.184 Sum_probs=53.0
Q ss_pred EEEEEcccccHHHHHHHHHCCC-CC--EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC-cee
Q 023411 122 RCIEVGVYTGYSSLAIALVLPE-SG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS-SYD 197 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~~-~~--~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~-~fD 197 (282)
+|.=||+| ..+..++..+.. +. +|+++|.+++..+.++ ..|... . ...+..+. -. ..|
T Consensus 3 ~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~-~~~~~~~~---------~~~~aD 64 (281)
T 2g5c_A 3 NVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--E-GTTSIAKV---------EDFSPD 64 (281)
T ss_dssp EEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG---------GGTCCS
T ss_pred EEEEEecC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--c-ccCCHHHH---------hcCCCC
Confidence 67778875 444444443321 23 7999999987765543 334421 1 11222221 24 679
Q ss_pred EEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 198 FAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 198 lV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
+||+..........++.+.+. ++++.+++.
T Consensus 65 vVilavp~~~~~~v~~~l~~~---l~~~~iv~~ 94 (281)
T 2g5c_A 65 FVMLSSPVRTFREIAKKLSYI---LSEDATVTD 94 (281)
T ss_dssp EEEECSCHHHHHHHHHHHHHH---SCTTCEEEE
T ss_pred EEEEcCCHHHHHHHHHHHHhh---CCCCcEEEE
Confidence 999987766666777777777 888875543
No 428
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.51 E-value=4.8 Score=32.17 Aligned_cols=70 Identities=17% Similarity=0.040 Sum_probs=47.2
Q ss_pred EEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEE
Q 023411 122 RCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~ 200 (282)
+||-+|+ +|..+..+++.+ ..+.+|++++.+++..... ....++++.+|..+..... -+.+|.||
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~-----~~~~d~vi 67 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEAD-----LDSVDAVV 67 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHH-----HTTCSEEE
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhh-----cccCCEEE
Confidence 5777774 688888877765 2357999999987644321 1235899999987642222 25789999
Q ss_pred EcCCc
Q 023411 201 VDAEK 205 (282)
Q Consensus 201 id~~~ 205 (282)
..+..
T Consensus 68 ~~ag~ 72 (224)
T 3h2s_A 68 DALSV 72 (224)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 87653
No 429
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.16 E-value=8.3 Score=32.25 Aligned_cols=83 Identities=19% Similarity=0.145 Sum_probs=51.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecC------------ccHHHHHHHHHHHhCCCCcEEEEEcchhhH--
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERD------------ARSLEVAKKYYERAGVSHKVKIKHGLAADS-- 183 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s------------~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~-- 183 (282)
.+++||-.|++ |.++..+++.+- .+.+|+.+|.+ .+.++.+.+.+...+ .++.++.+|..+.
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 46788888865 556666666552 35799999987 555555555555544 4689999998653
Q ss_pred HHHHHhCC--CCCceeEEEEcCC
Q 023411 184 LKALILNG--EASSYDFAFVDAE 204 (282)
Q Consensus 184 l~~l~~~~--~~~~fDlV~id~~ 204 (282)
...+...- ..+.+|+++..+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 11111100 0257899998755
No 430
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.72 E-value=4.3 Score=33.26 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=53.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.+++||-.| |+|.++..+++.+- .+.+|+.++.+++..+...+.++..+ .++.++.+|..+. +..+...- ..
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 456788666 46778888777653 35799999999877666655555443 3588899987652 22221100 01
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|.||..+.
T Consensus 87 ~~~d~vi~~Ag 97 (255)
T 1fmc_A 87 GKVDILVNNAG 97 (255)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998654
No 431
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.37 E-value=6.2 Score=36.14 Aligned_cols=105 Identities=16% Similarity=0.240 Sum_probs=58.9
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHH------------HHhCCCCcEEEEEcchhhHHH
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYY------------ERAGVSHKVKIKHGLAADSLK 185 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~------------~~~g~~~~v~~~~gd~~~~l~ 185 (282)
..-+|-=||+ |+++..+|..+.. +.+|+++|++++.++..++.. +.+-...++++. .|..+.
T Consensus 7 ~~~~~~vIGl--G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~~ea-- 81 (446)
T 4a7p_A 7 GSVRIAMIGT--GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDLAEG-- 81 (446)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHH--
T ss_pred CceEEEEEcC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCHHHH--
Confidence 3446777776 5666666555432 468999999998876654420 000001233332 222221
Q ss_pred HHHhCCCCCceeEEEEcCC-cc----------ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 186 ALILNGEASSYDFAFVDAE-KR----------MYQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 186 ~l~~~~~~~~fDlV~id~~-~~----------~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
+ ...|+||+.-+ +. ......+.+.+. |++|.++|......+|.
T Consensus 82 -~------~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~---l~~g~iVV~~STv~pgt 135 (446)
T 4a7p_A 82 -V------KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAEN---LTKPSVIVTKSTVPVGT 135 (446)
T ss_dssp -H------TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHS---CCSCCEEEECSCCCTTH
T ss_pred -H------hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHh---cCCCCEEEEeCCCCchH
Confidence 1 45689887633 21 234455566666 99988887766555554
No 432
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=84.34 E-value=1.4 Score=39.93 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=31.6
Q ss_pred cCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHH
Q 023411 118 LGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAK 161 (282)
Q Consensus 118 ~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~ 161 (282)
.++.+|+=+|+|. |..+..++..++ .+|+++|.+++..+.++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 3578999999873 445566666664 79999999998776653
No 433
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=84.29 E-value=1.4 Score=39.94 Aligned_cols=42 Identities=19% Similarity=0.204 Sum_probs=32.9
Q ss_pred CCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHH
Q 023411 119 GAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKK 162 (282)
Q Consensus 119 ~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~ 162 (282)
++.+|+-||+| .|..+..++..+ +++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 57899999998 355666677776 4799999999988776654
No 434
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.26 E-value=2.8 Score=34.74 Aligned_cols=83 Identities=23% Similarity=0.121 Sum_probs=54.0
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC--CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP--ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~--~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
++++||-.| |+|.++..+++.+- .+.+|+.++.+++..+...+.+...+ .++.++.+|..+. +..+...- .
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 356788666 56778888777653 36799999999877766666666543 3588899987652 22221100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+.+|+||..+.
T Consensus 80 ~g~id~li~~Ag 91 (276)
T 1wma_A 80 YGGLDVLVNNAG 91 (276)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 147999997754
No 435
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=84.14 E-value=14 Score=31.26 Aligned_cols=83 Identities=16% Similarity=0.212 Sum_probs=50.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCcc-HHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDAR-SLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~-~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.+++||-.|++ |.++..+++.+- .+.+|+.++.+++ ..+.+.+..+..+ .++.++.+|..+. ...+...- .
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45688888864 556666666552 3579999998875 3444444454433 4689999998653 11111100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+.+|+++..+.
T Consensus 123 ~g~iD~lvnnAg 134 (291)
T 3ijr_A 123 LGSLNILVNNVA 134 (291)
T ss_dssp HSSCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899998644
No 436
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=84.06 E-value=10 Score=34.61 Aligned_cols=106 Identities=10% Similarity=0.153 Sum_probs=59.2
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHH------------HHHhCCCCcEEEEEcchhhHHH
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKY------------YERAGVSHKVKIKHGLAADSLK 185 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~------------~~~~g~~~~v~~~~gd~~~~l~ 185 (282)
....+|--||+ |+.+..++..+..+.+|+++|++++.++..++. +.. + ..++++. .|..+.
T Consensus 34 ~~~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~-~~~l~~t-td~~ea-- 106 (432)
T 3pid_A 34 SEFMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K-PLNFRAT-TDKHDA-- 106 (432)
T ss_dssp -CCCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S-CCCEEEE-SCHHHH--
T ss_pred cCCCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c-cCCeEEE-cCHHHH--
Confidence 34457887886 556555555554357899999999887765541 111 0 1123332 222221
Q ss_pred HHHhCCCCCceeEEEEcCCcc--------ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 186 ALILNGEASSYDFAFVDAEKR--------MYQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 186 ~l~~~~~~~~fDlV~id~~~~--------~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
+ ...|+||+..+.. +.......+..+.. |+||.++|......+|.
T Consensus 107 -~------~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgt 159 (432)
T 3pid_A 107 -Y------RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGF 159 (432)
T ss_dssp -H------TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTH
T ss_pred -H------hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHH
Confidence 1 4568998764422 12233333444444 78888888766666664
No 437
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=84.00 E-value=5.2 Score=30.37 Aligned_cols=97 Identities=12% Similarity=-0.026 Sum_probs=50.5
Q ss_pred cccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCcc
Q 023411 127 GVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR 206 (282)
Q Consensus 127 G~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~ 206 (282)
+.|+++.+....+......+|..+|-++...+..+..+...+.. .+.....+..+.+..+. ...+|+|++|....
T Consensus 8 ~~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~al~~l~----~~~~dlvilD~~l~ 82 (164)
T 3t8y_A 8 HHHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDM-KVVGFAKDGLEAVEKAI----ELKPDVITMDIEMP 82 (164)
T ss_dssp ----------------CCEEEEEECSCHHHHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHH----HHCCSEEEECSSCS
T ss_pred ccccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHhc----cCCCCEEEEeCCCC
Confidence 34566666666665443468999999999888888888765421 12223456655555443 35799999997643
Q ss_pred c--cHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 207 M--YQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 207 ~--~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
. -.+.++.+... .+--++++..
T Consensus 83 ~~~g~~l~~~lr~~----~~~~ii~~s~ 106 (164)
T 3t8y_A 83 NLNGIEALKLIMKK----APTRVIMVSS 106 (164)
T ss_dssp SSCHHHHHHHHHHH----SCCEEEEEES
T ss_pred CCCHHHHHHHHHhc----CCceEEEEec
Confidence 3 34455666554 3444555543
No 438
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=83.92 E-value=6.7 Score=32.97 Aligned_cols=81 Identities=15% Similarity=0.051 Sum_probs=56.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--H----HHHHhCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--L----KALILNG 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l----~~l~~~~ 191 (282)
.++.+|--|.+. .++..+++.+. .+++|+.+|.+++.++.+.+.+...|. ++..+.+|..+. . ......
T Consensus 8 ~gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~- 83 (255)
T 4g81_D 8 TGKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY--DAHGVAFDVTDELAIEAAFSKLDAE- 83 (255)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHHT-
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHH-
Confidence 567788777654 46666666552 368999999999988888877777663 588888887552 1 222222
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
.++.|+++.++.
T Consensus 84 -~G~iDiLVNNAG 95 (255)
T 4g81_D 84 -GIHVDILINNAG 95 (255)
T ss_dssp -TCCCCEEEECCC
T ss_pred -CCCCcEEEECCC
Confidence 478999998754
No 439
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=83.91 E-value=4.1 Score=34.21 Aligned_cols=85 Identities=16% Similarity=0.165 Sum_probs=56.2
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.+++||-.|+ +|.++..+++.+- .+.+|+.++.+++.++...+.+...+...++.++.+|..+. +..+...- ..
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 4568887775 5667777766552 35799999999887777666676666556788899887653 12211100 01
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+||..+.
T Consensus 110 g~iD~vi~~Ag 120 (279)
T 1xg5_A 110 SGVDICINNAG 120 (279)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998654
No 440
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.89 E-value=4.5 Score=33.57 Aligned_cols=84 Identities=18% Similarity=0.088 Sum_probs=53.5
Q ss_pred cCCCEEEEEccc-ccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--
Q 023411 118 LGAQRCIEVGVY-TGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-- 191 (282)
Q Consensus 118 ~~~~~VLEIG~G-~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~-- 191 (282)
.+.++||-.|++ +|.++..+++.+. .+.+|+.++.++...+.+++..+..+ ++.++.+|..+. ...+.+.-
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHH
Confidence 467799988874 3556666666542 35799999998776666666555543 378888887652 12221100
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
..+++|++|..+.
T Consensus 89 ~~g~id~lv~nAg 101 (271)
T 3ek2_A 89 HWDSLDGLVHSIG 101 (271)
T ss_dssp HCSCEEEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 1258999998754
No 441
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=83.79 E-value=8.1 Score=32.00 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=51.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH--HHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~l~~~~--~~ 193 (282)
.++++|-.|++ |.++..+++.+ ..+.+|+.++.+++.++...+.+ ..++.++.+|..+.- ..+.+.- ..
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 56788888865 55666666655 23679999999988766655544 236899999886531 1111100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 81 g~id~lv~nAg 91 (255)
T 4eso_A 81 GAIDLLHINAG 91 (255)
T ss_dssp SSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 58999998754
No 442
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=83.57 E-value=9.3 Score=33.79 Aligned_cols=90 Identities=8% Similarity=0.117 Sum_probs=54.7
Q ss_pred CCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
..+|.=||+ |..+..++..+. .+.+|+++|.+++..+.+.+ .|. .. ..+..+.... ....|+
T Consensus 22 ~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----~g~----~~-~~s~~e~~~~------a~~~Dv 84 (358)
T 4e21_A 22 SMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALER----EGI----AG-ARSIEEFCAK------LVKPRV 84 (358)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----TTC----BC-CSSHHHHHHH------SCSSCE
T ss_pred CCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----CCC----EE-eCCHHHHHhc------CCCCCE
Confidence 457888887 555555555442 24689999999876654432 232 11 2233333332 245699
Q ss_pred EEEcCCccccHHHHHHHHHhhcCCCCCcEEE
Q 023411 199 AFVDAEKRMYQEYFELLLQLLLQIRVGGIIV 229 (282)
Q Consensus 199 V~id~~~~~~~~~l~~~~~~~~~LkpgG~lv 229 (282)
||+..........++.+.+. |++|.++|
T Consensus 85 Vi~~vp~~~v~~vl~~l~~~---l~~g~iiI 112 (358)
T 4e21_A 85 VWLMVPAAVVDSMLQRMTPL---LAANDIVI 112 (358)
T ss_dssp EEECSCGGGHHHHHHHHGGG---CCTTCEEE
T ss_pred EEEeCCHHHHHHHHHHHHhh---CCCCCEEE
Confidence 99876655666667777776 88876554
No 443
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=83.49 E-value=9.4 Score=34.04 Aligned_cols=83 Identities=8% Similarity=0.007 Sum_probs=55.9
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCC-CC-CEEEEEecCccHHHHHHHHHHHhCC--CCcEEEEEcchhhHH--HHHHhCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLP-ES-GCLVACERDARSLEVAKKYYERAGV--SHKVKIKHGLAADSL--KALILNG 191 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~-~~-~~v~~iD~s~~~~~~a~~~~~~~g~--~~~v~~~~gd~~~~l--~~l~~~~ 191 (282)
..+++||-.|+ +|..+..+++.+- .+ .+|++++.++..+....+.+..... ..++.++.+|..+.. ..+..
T Consensus 33 ~~~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-- 109 (399)
T 3nzo_A 33 VSQSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKA-- 109 (399)
T ss_dssp HHTCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHH--
T ss_pred hCCCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHH--
Confidence 34678998775 6888888887763 24 5899999998877655555544321 246899999987632 22211
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
...+|.||..+.
T Consensus 110 -~~~~D~Vih~Aa 121 (399)
T 3nzo_A 110 -DGQYDYVLNLSA 121 (399)
T ss_dssp -CCCCSEEEECCC
T ss_pred -hCCCCEEEECCC
Confidence 367899998765
No 444
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.46 E-value=7.5 Score=32.32 Aligned_cols=82 Identities=17% Similarity=0.101 Sum_probs=55.4
Q ss_pred cCCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHH----HHhC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKA----LILN 190 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~----l~~~ 190 (282)
..++++|-.|++.| ++..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. ... +.+.
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35678888887554 555555554 236799999999988887777776654 4589999997653 122 1111
Q ss_pred CCCCceeEEEEcCC
Q 023411 191 GEASSYDFAFVDAE 204 (282)
Q Consensus 191 ~~~~~fDlV~id~~ 204 (282)
.+++|+++..+.
T Consensus 86 --~g~id~lv~nAg 97 (264)
T 3ucx_A 86 --YGRVDVVINNAF 97 (264)
T ss_dssp --TSCCSEEEECCC
T ss_pred --cCCCcEEEECCC
Confidence 258999998763
No 445
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=83.35 E-value=6.6 Score=35.30 Aligned_cols=89 Identities=15% Similarity=0.092 Sum_probs=54.4
Q ss_pred CEEEEEcccccHHHHHHHHHCCCC----CEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhh--HHHHHHhCCCCC
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPES----GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD--SLKALILNGEAS 194 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~~----~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~--~l~~l~~~~~~~ 194 (282)
++|+=+|+ |+.+..+++.+... .+|+.++.+++..+...+.+...+ ..++..+..|..+ .+..+.. ..
T Consensus 2 ~kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~---~~ 75 (405)
T 4ina_A 2 AKVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALIN---EV 75 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHH---HH
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHH---hh
Confidence 37888888 46777776655322 389999999887776666555432 1247888888754 2333321 11
Q ss_pred ceeEEEEcCCccccHHHHHHH
Q 023411 195 SYDFAFVDAEKRMYQEYFELL 215 (282)
Q Consensus 195 ~fDlV~id~~~~~~~~~l~~~ 215 (282)
..|+|+............+.+
T Consensus 76 ~~DvVin~ag~~~~~~v~~a~ 96 (405)
T 4ina_A 76 KPQIVLNIALPYQDLTIMEAC 96 (405)
T ss_dssp CCSEEEECSCGGGHHHHHHHH
T ss_pred CCCEEEECCCcccChHHHHHH
Confidence 479999876654333333333
No 446
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.18 E-value=2.5 Score=39.40 Aligned_cols=88 Identities=10% Similarity=0.076 Sum_probs=53.6
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCc
Q 023411 117 ILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (282)
Q Consensus 117 ~~~~~~VLEIG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~ 195 (282)
...+++|+-+|+|. |......++.+ +.+|+++|.++...+.+++ .|. ++ .+..+ . -..
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e----~-----l~~ 329 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMM----EGF----DV--VTVEE----A-----IGD 329 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTC----EE--CCHHH----H-----GGG
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----EE--ecHHH----H-----HhC
Confidence 35688999999852 44444455554 4799999999886655432 343 22 22222 2 246
Q ss_pred eeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 196 YDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 196 fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
.|+|+......+.. -....+. +|+||+++-
T Consensus 330 aDvVi~atgt~~~i--~~~~l~~---mk~ggilvn 359 (494)
T 3ce6_A 330 ADIVVTATGNKDII--MLEHIKA---MKDHAILGN 359 (494)
T ss_dssp CSEEEECSSSSCSB--CHHHHHH---SCTTCEEEE
T ss_pred CCEEEECCCCHHHH--HHHHHHh---cCCCcEEEE
Confidence 79999865433321 1245566 899998875
No 447
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=83.15 E-value=23 Score=31.04 Aligned_cols=119 Identities=7% Similarity=-0.044 Sum_probs=68.3
Q ss_pred HHHHHhhc-CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhC---------------------
Q 023411 111 LAMLVQIL-GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--------------------- 168 (282)
Q Consensus 111 l~~l~~~~-~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--------------------- 168 (282)
+..++... +...|+-+|||.=.-...+.....++.+++=||. |+.++.=++.+...+
T Consensus 81 v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~ 159 (334)
T 3iei_A 81 IKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHI 159 (334)
T ss_dssp HHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTE
T ss_pred HHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhccccccccccccccc
Confidence 33434433 5679999999876666666543212568888887 555554444444311
Q ss_pred -CCCcEEEEEcchhh--HHHH-HHhCC-CCCceeEEEEcCC-----ccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 169 -VSHKVKIKHGLAAD--SLKA-LILNG-EASSYDFAFVDAE-----KRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 169 -~~~~v~~~~gd~~~--~l~~-l~~~~-~~~~fDlV~id~~-----~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
...+.+++.+|..+ .+.. +...+ +.+..=+++..+. .+.....++.+... ..+|..++.+-+
T Consensus 160 l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~---f~~~~~i~yE~i 231 (334)
T 3iei_A 160 LDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANS---FERAMFINYEQV 231 (334)
T ss_dssp EECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHH---CSSEEEEEEEEC
T ss_pred CCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHh---CCCceEEEEecc
Confidence 14578999999876 3333 22222 2334446666665 33455667777766 555555555544
No 448
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=83.10 E-value=2.6 Score=37.14 Aligned_cols=101 Identities=15% Similarity=0.176 Sum_probs=58.3
Q ss_pred HhhcCCCEEEEEccc-ccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcc--hhhHHHHHHhCC
Q 023411 115 VQILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL--AADSLKALILNG 191 (282)
Q Consensus 115 ~~~~~~~~VLEIG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd--~~~~l~~l~~~~ 191 (282)
+...++++||-+|+| .|..+..+++... +++|+++|.+++..+.+++ .|.+. ++..+ ..+.+..+.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~v~~~~--- 250 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAER----LGADH---VVDARRDPVKQVMELT--- 250 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHH----TTCSE---EEETTSCHHHHHHHHT---
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHH----hCCCE---EEeccchHHHHHHHHh---
Confidence 455678899999985 3555667777662 4799999999887776653 45332 22211 112222221
Q ss_pred CCCceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEeC
Q 023411 192 EASSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVIDN 232 (282)
Q Consensus 192 ~~~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd 232 (282)
....+|+||-...... ...++...+ + ++|.++.=.
T Consensus 251 ~g~g~Dvvid~~G~~~-~~~~~~~~~----~-~~G~~v~~g 285 (359)
T 1h2b_A 251 RGRGVNVAMDFVGSQA-TVDYTPYLL----G-RMGRLIIVG 285 (359)
T ss_dssp TTCCEEEEEESSCCHH-HHHHGGGGE----E-EEEEEEECC
T ss_pred CCCCCcEEEECCCCch-HHHHHHHhh----c-CCCEEEEEe
Confidence 1237999986544321 002333332 4 899887743
No 449
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=82.60 E-value=8.6 Score=32.03 Aligned_cols=77 Identities=22% Similarity=0.247 Sum_probs=46.0
Q ss_pred CEEEEEcccc-cHHH-HHHHHHCCCCCEEEEEecCc-------------------cHHHHHHHHHHHhCCCCcEEEEEcc
Q 023411 121 QRCIEVGVYT-GYSS-LAIALVLPESGCLVACERDA-------------------RSLEVAKKYYERAGVSHKVKIKHGL 179 (282)
Q Consensus 121 ~~VLEIG~G~-G~~t-~~la~~~~~~~~v~~iD~s~-------------------~~~~~a~~~~~~~g~~~~v~~~~gd 179 (282)
.+|+=+|+|. |... ..++.. + -++++.+|.+. .-.+.+++.+...+..-+++.+..+
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-G-v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 109 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-G-VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 109 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-C-CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 4899999862 3322 223332 2 26899999987 5667777777765433346666554
Q ss_pred hhh-HHHHHHhCCCCCceeEEEEcCC
Q 023411 180 AAD-SLKALILNGEASSYDFAFVDAE 204 (282)
Q Consensus 180 ~~~-~l~~l~~~~~~~~fDlV~id~~ 204 (282)
..+ ....+ -..+|+|+...+
T Consensus 110 ~~~~~~~~~-----~~~~DvVi~~~d 130 (249)
T 1jw9_B 110 LDDAELAAL-----IAEHDLVLDCTD 130 (249)
T ss_dssp CCHHHHHHH-----HHTSSEEEECCS
T ss_pred CCHhHHHHH-----HhCCCEEEEeCC
Confidence 432 22222 257899987554
No 450
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.58 E-value=12 Score=27.95 Aligned_cols=41 Identities=17% Similarity=0.171 Sum_probs=30.3
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHH
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVA 160 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a 160 (282)
..+++|+=||+ |..+..++..+.. +.+|+.+|.+++..+..
T Consensus 19 ~~~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~ 60 (144)
T 3oj0_A 19 NGGNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAF 60 (144)
T ss_dssp HCCCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHH
T ss_pred ccCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHH
Confidence 34789999997 6777777777642 45799999998765543
No 451
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.58 E-value=4.5 Score=33.53 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=55.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC-CCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-EAS 194 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~-~~~ 194 (282)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++.++.+.+.++..+ .++.++.+|..+. ...+...- +.+
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 45678878865 456666666552 35799999999998888877777654 4689999998653 22221110 015
Q ss_pred ceeEEEEcCC
Q 023411 195 SYDFAFVDAE 204 (282)
Q Consensus 195 ~fDlV~id~~ 204 (282)
.+|+++..+.
T Consensus 83 ~id~lv~nAg 92 (252)
T 3h7a_A 83 PLEVTIFNVG 92 (252)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEECCC
Confidence 7999998765
No 452
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=82.57 E-value=3.2 Score=36.82 Aligned_cols=94 Identities=14% Similarity=0.070 Sum_probs=56.0
Q ss_pred CEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHHHH------hCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYER------AGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~------~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
.+|.=||+ |.++..++..+.. +.+|+.+|.+++.++..++.-.. ..+..++++. .|..+ .+
T Consensus 30 mkI~VIGa--G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~e---a~------ 97 (356)
T 3k96_A 30 HPIAILGA--GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKA---SL------ 97 (356)
T ss_dssp SCEEEECC--SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHH---HH------
T ss_pred CeEEEECc--cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHH---HH------
Confidence 47888887 4555555554432 34799999998876655543110 0111223332 22222 12
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEE
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIV 229 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv 229 (282)
...|+||+.-+.....+.++.+.+. ++++.+++
T Consensus 98 ~~aDvVilaVp~~~~~~vl~~i~~~---l~~~~ivv 130 (356)
T 3k96_A 98 EGVTDILIVVPSFAFHEVITRMKPL---IDAKTRIA 130 (356)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHGGG---CCTTCEEE
T ss_pred hcCCEEEECCCHHHHHHHHHHHHHh---cCCCCEEE
Confidence 4679999887766666777777777 88876554
No 453
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=82.47 E-value=2.4 Score=47.33 Aligned_cols=103 Identities=9% Similarity=0.078 Sum_probs=65.3
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCC
Q 023411 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (282)
Q Consensus 116 ~~~~~~~VLEIG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~ 193 (282)
+..++++||-.|+ |.|..++.+++.. +++|++++.+++..+.+++.+...|... ++.....+....+......
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~--Ga~Viat~~s~~k~~~l~~~~~~lga~~---v~~~~~~~~~~~i~~~t~g 1738 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSR--GCRVFTTVGSAEKRAYLQARFPQLDETC---FANSRDTSFEQHVLRHTAG 1738 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTCCSTT---EEESSSSHHHHHHHHTTTS
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHc--CCEEEEEeCChhhhHHHHhhcCCCCceE---EecCCCHHHHHHHHHhcCC
Confidence 3567889998864 5677788888886 4799999998887776665432233332 2222222333333322223
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
..+|+||-... ...++...++ |+++|.++.
T Consensus 1739 ~GvDvVld~~g----~~~l~~~l~~---L~~~Gr~V~ 1768 (2512)
T 2vz8_A 1739 KGVDLVLNSLA----EEKLQASVRC---LAQHGRFLE 1768 (2512)
T ss_dssp CCEEEEEECCC----HHHHHHHHTT---EEEEEEEEE
T ss_pred CCceEEEECCC----chHHHHHHHh---cCCCcEEEE
Confidence 57999986443 3457777787 999998875
No 454
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=82.36 E-value=4.3 Score=32.57 Aligned_cols=74 Identities=14% Similarity=0.164 Sum_probs=48.2
Q ss_pred CEEEEEcccccHHHHHHHHHCC--CCCEEEEEecCcc-HHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCc
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP--ESGCLVACERDAR-SLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASS 195 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~--~~~~v~~iD~s~~-~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~ 195 (282)
++||-+|+ +|..+..+++.+- .+.+|++++.+++ .++... . ...++.++.+|..+. +... -..
T Consensus 6 k~vlVtGa-sg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~~D~~d~~~~~~~-----~~~ 73 (221)
T 3r6d_A 6 XYITILGA-AGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I--DHERVTVIEGSFQNPGXLEQA-----VTN 73 (221)
T ss_dssp SEEEEEST-TSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H--TSTTEEEEECCTTCHHHHHHH-----HTT
T ss_pred EEEEEEeC-CcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c--CCCceEEEECCCCCHHHHHHH-----HcC
Confidence 35887774 5777777666553 4679999999876 433221 1 124589999998753 2333 256
Q ss_pred eeEEEEcCCcc
Q 023411 196 YDFAFVDAEKR 206 (282)
Q Consensus 196 fDlV~id~~~~ 206 (282)
+|+||......
T Consensus 74 ~d~vv~~ag~~ 84 (221)
T 3r6d_A 74 AEVVFVGAMES 84 (221)
T ss_dssp CSEEEESCCCC
T ss_pred CCEEEEcCCCC
Confidence 89999887653
No 455
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.35 E-value=5.5 Score=33.07 Aligned_cols=84 Identities=18% Similarity=0.133 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-cccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGV-YTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~-G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.+++||-.|+ |.| ++..+++.+ ..+.+|+.++.+++.++.+.+.+...+ ..++.++.+|..+. ...+...- .
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4668888876 444 344444433 236799999999988877777775543 24699999998653 11111100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+++|+++..+.
T Consensus 99 ~g~id~li~~Ag 110 (266)
T 3o38_A 99 AGRLDVLVNNAG 110 (266)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCcEEEECCC
Confidence 257899998765
No 456
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=82.31 E-value=8.6 Score=31.38 Aligned_cols=81 Identities=14% Similarity=0.123 Sum_probs=55.1
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHH----HHhCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKA----LILNG 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~----l~~~~ 191 (282)
.++++|=.|+ +|.++..+++.+. .+.+|+.++.+++..+...+.++..+ .++.++.+|..+. ... +...
T Consensus 4 ~~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~- 79 (247)
T 3lyl_A 4 NEKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAE- 79 (247)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHT-
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH-
Confidence 3567887775 5666666666552 35799999999988877777776654 3589999998653 122 2211
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
.+++|+++..+.
T Consensus 80 -~~~id~li~~Ag 91 (247)
T 3lyl_A 80 -NLAIDILVNNAG 91 (247)
T ss_dssp -TCCCSEEEECCC
T ss_pred -cCCCCEEEECCC
Confidence 357899998754
No 457
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=82.16 E-value=4.7 Score=37.27 Aligned_cols=105 Identities=10% Similarity=0.102 Sum_probs=58.2
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHHHH---hCC---------CCcEEEEEcchhhHHH
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYER---AGV---------SHKVKIKHGLAADSLK 185 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~---~g~---------~~~v~~~~gd~~~~l~ 185 (282)
...+|.-||+| +.+..++..+.. +.+|+++|++++.++..++.... .++ ..++++. .|..+.+
T Consensus 7 ~~~~I~VIG~G--~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~a~- 82 (478)
T 2y0c_A 7 GSMNLTIIGSG--SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEAAV- 82 (478)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHHHH-
T ss_pred CCceEEEECcC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHHHh-
Confidence 45588889876 444443333321 45899999999877665542100 000 1123332 2222211
Q ss_pred HHHhCCCCCceeEEEEcCCc----------cccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 186 ALILNGEASSYDFAFVDAEK----------RMYQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 186 ~l~~~~~~~~fDlV~id~~~----------~~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
...|+||+.-+. ......++.+.+. +++|.+++......+|.
T Consensus 83 --------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~---l~~~~iVV~~STv~~gt 134 (478)
T 2y0c_A 83 --------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRY---MTGFKVIVDKSTVPVGT 134 (478)
T ss_dssp --------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHH---CCSCEEEEECSCCCTTH
T ss_pred --------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHh---cCCCCEEEEeCCcCCCc
Confidence 356899886543 3455566677777 99988776654444443
No 458
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.09 E-value=2.9 Score=38.53 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=49.7
Q ss_pred CEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCcee
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYD 197 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~fD 197 (282)
.+|+=+|| |..+..+++.+.. +..|+.||.+++.++.+.+.+ .+..++||+.+. +... + -+..|
T Consensus 4 M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A---g-i~~ad 70 (461)
T 4g65_A 4 MKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA---G-AQDAD 70 (461)
T ss_dssp EEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH---T-TTTCS
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc---C-CCcCC
Confidence 46776665 6788888888853 357999999999887665543 278899998763 3332 2 46789
Q ss_pred EEEEcCC
Q 023411 198 FAFVDAE 204 (282)
Q Consensus 198 lV~id~~ 204 (282)
+++.--.
T Consensus 71 ~~ia~t~ 77 (461)
T 4g65_A 71 MLVAVTN 77 (461)
T ss_dssp EEEECCS
T ss_pred EEEEEcC
Confidence 8876433
No 459
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.89 E-value=7 Score=32.55 Aligned_cols=85 Identities=15% Similarity=0.107 Sum_probs=54.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH--HHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~l~~~~--~~ 193 (282)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++.++.+.+.+....-..++.++.+|..+.. ..+...- ..
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 45688888865 456666665542 367999999999888777776665322335889999876531 1111100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 86 g~id~lvnnAg 96 (265)
T 3lf2_A 86 GCASILVNNAG 96 (265)
T ss_dssp CSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998754
No 460
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.80 E-value=4.7 Score=34.04 Aligned_cols=85 Identities=14% Similarity=0.020 Sum_probs=55.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH---HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS---LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~---l~~l~~~~--~ 192 (282)
.+++||-.|++ |.++..+++.+ ..+.+|+.++.+++..+.+.+.+...+. .++.++.+|..+. ...+...- .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 45678877764 56677766665 2367999999999887777766665443 3699999988653 11111100 0
Q ss_pred CCceeEEEEcCCc
Q 023411 193 ASSYDFAFVDAEK 205 (282)
Q Consensus 193 ~~~fDlV~id~~~ 205 (282)
.+.+|++|..+..
T Consensus 89 ~g~iD~lv~nAg~ 101 (311)
T 3o26_A 89 FGKLDILVNNAGV 101 (311)
T ss_dssp HSSCCEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2589999988763
No 461
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=81.46 E-value=7.8 Score=35.31 Aligned_cols=106 Identities=9% Similarity=0.225 Sum_probs=54.1
Q ss_pred CCEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC------CC
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN------GE 192 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~------~~ 192 (282)
+.+.--||+ |+.+..+|..+.+ +.+|+++|++++.++..++. .. .+..-...+.+...... .+
T Consensus 11 ~~~~~ViGl--GyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g-----~~---pi~epgl~~ll~~~~~~g~l~~ttd 80 (431)
T 3ojo_A 11 GSKLTVVGL--GYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNG-----QI---SIEEPGLQEVYEEVLSSGKLKVSTT 80 (431)
T ss_dssp -CEEEEECC--STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-----CC---SSCCTTHHHHHHHHHHTTCEEEESS
T ss_pred CCccEEEee--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCC-----CC---CcCCCCHHHHHHhhcccCceEEeCc
Confidence 345555676 5555555554432 45899999999877665431 10 00111111111110000 00
Q ss_pred CCceeEEEEcCCcc---------ccHHH---HHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 193 ASSYDFAFVDAEKR---------MYQEY---FELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 193 ~~~fDlV~id~~~~---------~~~~~---l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
...-|+||+.-+.+ +.... .+.+.+. |++|.++|......+|.
T Consensus 81 ~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~---l~~g~iVV~~STV~pgt 135 (431)
T 3ojo_A 81 PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPF---LKKGNTIIVESTIAPKT 135 (431)
T ss_dssp CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGG---CCTTEEEEECSCCCTTH
T ss_pred hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHh---CCCCCEEEEecCCChhH
Confidence 13468888753311 22222 3444455 89998888777777775
No 462
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.27 E-value=6.2 Score=32.63 Aligned_cols=85 Identities=16% Similarity=0.037 Sum_probs=54.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCC-CcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++.++.+.+.+...... .++.++.+|..+. ...+...- .
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 45678877765 555666655542 2579999999998887777777665322 4688899887652 11111100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+.+|+++..+.
T Consensus 85 ~g~iD~lvnnAg 96 (250)
T 3nyw_A 85 YGAVDILVNAAA 96 (250)
T ss_dssp HCCEEEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 258999998765
No 463
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=81.15 E-value=5.8 Score=34.20 Aligned_cols=80 Identities=9% Similarity=0.074 Sum_probs=51.1
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCC---CcEEEEEcchhhH--HHHHHhCCC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVS---HKVKIKHGLAADS--LKALILNGE 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~---~~v~~~~gd~~~~--l~~l~~~~~ 192 (282)
..++||-.| |+|.++..+++.+ ..+.+|++++.++.......+.+...... .+++++.+|..+. +..+
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----- 97 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV----- 97 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH-----
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH-----
Confidence 456899777 4788888887766 23579999998664322222222221100 3699999998663 3333
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
-..+|.||..+.
T Consensus 98 ~~~~d~Vih~A~ 109 (351)
T 3ruf_A 98 MKGVDHVLHQAA 109 (351)
T ss_dssp TTTCSEEEECCC
T ss_pred hcCCCEEEECCc
Confidence 357899998765
No 464
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=81.12 E-value=6.7 Score=33.45 Aligned_cols=83 Identities=18% Similarity=0.090 Sum_probs=55.9
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.+++||-.|++ |.++..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. ...+...- ..
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 56788888875 55666666655 235799999999988888777776654 3589999998653 22221100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 107 g~id~lvnnAg 117 (301)
T 3tjr_A 107 GGVDVVFSNAG 117 (301)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998765
No 465
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=80.80 E-value=10 Score=31.45 Aligned_cols=83 Identities=14% Similarity=0.043 Sum_probs=51.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEE-ecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVAC-ERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~i-D~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.++++|-.|++ |.++..+++.+. .+.+|+.+ +.+++..+.+.+.++..+ .++.++.+|..+. ...+.+.- .
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888865 456666666552 35788888 666666666666665544 4588899987653 12221100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+.+|+++..+.
T Consensus 84 ~g~id~lv~nAg 95 (259)
T 3edm_A 84 FGEIHGLVHVAG 95 (259)
T ss_dssp HCSEEEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 258999998753
No 466
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=80.70 E-value=6.3 Score=33.20 Aligned_cols=83 Identities=22% Similarity=0.234 Sum_probs=53.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. ...+...- ..
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45688888864 556666666552 36799999999988877777676544 4589999998653 11111100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+++|+++..+.
T Consensus 100 g~id~lv~nAg 110 (279)
T 3sju_A 100 GPIGILVNSAG 110 (279)
T ss_dssp CSCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 57899998754
No 467
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=80.67 E-value=6.8 Score=32.91 Aligned_cols=85 Identities=11% Similarity=0.003 Sum_probs=55.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCC-CcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.+++||-.|+ +|.++..+++.+ ..+.+|+.++.+++.++.+.+.++..+.. .++.++.+|..+. ...+.+.- .
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4568887876 455666666655 23679999999998887777777655432 2689999998653 11111100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+++|+++..+.
T Consensus 89 ~g~id~lv~nAg 100 (281)
T 3svt_A 89 HGRLHGVVHCAG 100 (281)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899998755
No 468
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=80.34 E-value=8.2 Score=31.82 Aligned_cols=84 Identities=8% Similarity=-0.037 Sum_probs=53.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch--hh--HHHHHHhCC--
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA--AD--SLKALILNG-- 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~--~~--~l~~l~~~~-- 191 (282)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++.++.+.+.+...+- .++.++.+|. .+ ....+...-
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHHH
Confidence 46688877764 556666666552 367999999999887777666665442 2478888887 32 122221100
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
..+.+|+++..+.
T Consensus 89 ~~g~id~lv~nAg 101 (252)
T 3f1l_A 89 NYPRLDGVLHNAG 101 (252)
T ss_dssp HCSCCSEEEECCC
T ss_pred hCCCCCEEEECCc
Confidence 1358999998654
No 469
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.32 E-value=10 Score=34.72 Aligned_cols=78 Identities=19% Similarity=0.149 Sum_probs=55.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
+.++|+=+|. |..+.++|+.+.+..+|.-+|.+++..+.+.+.+ + +..+++||+.+. .-+...+ -+..|+
T Consensus 234 ~~~~v~I~Gg--G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l-----~-~~~Vi~GD~td~-~~L~ee~-i~~~D~ 303 (461)
T 4g65_A 234 PYRRIMIVGG--GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL-----E-NTIVFCGDAADQ-ELLTEEN-IDQVDV 303 (461)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC-----T-TSEEEESCTTCH-HHHHHTT-GGGCSE
T ss_pred cccEEEEEcc--hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC-----C-CceEEeccccch-hhHhhcC-chhhcE
Confidence 4568887764 6788888888876789999999998877766654 2 478999999873 1122111 368899
Q ss_pred EEEcCCcc
Q 023411 199 AFVDAEKR 206 (282)
Q Consensus 199 V~id~~~~ 206 (282)
++.--...
T Consensus 304 ~ia~T~~D 311 (461)
T 4g65_A 304 FIALTNED 311 (461)
T ss_dssp EEECCSCH
T ss_pred EEEcccCc
Confidence 88765543
No 470
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=79.74 E-value=9.2 Score=31.76 Aligned_cols=85 Identities=18% Similarity=0.098 Sum_probs=53.7
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.++++|-.|+ +|.++..+++.+- .+.+|+.++.+++.++.+.+.+.......++.++.+|..+. +..+...- ..
T Consensus 12 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4568887876 5666777666552 35799999999887766666555442224588899987652 22221100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 91 g~id~lv~nAg 101 (267)
T 1iy8_A 91 GRIDGFFNNAG 101 (267)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998754
No 471
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=79.74 E-value=7.5 Score=31.90 Aligned_cols=83 Identities=22% Similarity=0.154 Sum_probs=55.3
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.+++||-.|+ +|.++..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++.+|..+. ...+...- ..
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4568888886 4566666666652 35799999999988877777776544 4688999998653 12211100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|.++..+.
T Consensus 85 g~id~li~~Ag 95 (253)
T 3qiv_A 85 GGIDYLVNNAA 95 (253)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998764
No 472
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.41 E-value=6.4 Score=34.19 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=55.6
Q ss_pred CEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHH----hCCCCcEE--EEEcchhhHHHHHHhCCCC
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYER----AGVSHKVK--IKHGLAADSLKALILNGEA 193 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~----~g~~~~v~--~~~gd~~~~l~~l~~~~~~ 193 (282)
.+|.=||+| ..+..++..+. .+.+|+.+|.+++.++..++.... .+...... ....+ +... .
T Consensus 5 mki~iiG~G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~ 73 (359)
T 1bg6_A 5 KTYAVLGLG--NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSD----IGLA-----V 73 (359)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESC----HHHH-----H
T ss_pred CeEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCC----HHHH-----H
Confidence 478889985 44444444332 146899999998776655442100 00000000 11112 2222 1
Q ss_pred CceeEEEEcCCccccHHHHHHHHHhhcCCCCCcEEEEe
Q 023411 194 SSYDFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIVID 231 (282)
Q Consensus 194 ~~fDlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv~d 231 (282)
..+|+||+........+.++.+.+. +++|.+++..
T Consensus 74 ~~~D~vi~~v~~~~~~~~~~~l~~~---l~~~~~vv~~ 108 (359)
T 1bg6_A 74 KDADVILIVVPAIHHASIAANIASY---ISEGQLIILN 108 (359)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHGGG---CCTTCEEEES
T ss_pred hcCCEEEEeCCchHHHHHHHHHHHh---CCCCCEEEEc
Confidence 4689999987766667777777777 8888766654
No 473
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=79.16 E-value=8 Score=31.53 Aligned_cols=84 Identities=18% Similarity=0.075 Sum_probs=53.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcch--hh--HHHHHHhCC--
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA--AD--SLKALILNG-- 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~--~~--~l~~l~~~~-- 191 (282)
.+++||-.|+ +|.++..+++.+- .+.+|+.++.+++.++...+.++..+.. ++.++..|. .+ ....+.+.-
T Consensus 13 ~~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 13 KGRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP-QPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSC-CCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCC-CceEEEeccccCCHHHHHHHHHHHHH
Confidence 4568887776 4666667666652 3579999999998888888777766533 467777665 22 111111100
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
..+.+|+++..+.
T Consensus 91 ~~g~id~lv~nAg 103 (247)
T 3i1j_A 91 EFGRLDGLLHNAS 103 (247)
T ss_dssp HHSCCSEEEECCC
T ss_pred hCCCCCEEEECCc
Confidence 0257899998754
No 474
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=78.72 E-value=27 Score=29.02 Aligned_cols=83 Identities=17% Similarity=0.110 Sum_probs=50.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCc-cHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--C
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDA-RSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~-~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~ 192 (282)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+. +..+...+.++..+ .++.++.+|..+. ...+...- .
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56788888865 556666666552 357898886653 45555555555544 4588999988653 12211100 0
Q ss_pred CCceeEEEEcCC
Q 023411 193 ASSYDFAFVDAE 204 (282)
Q Consensus 193 ~~~fDlV~id~~ 204 (282)
.+++|+++..+.
T Consensus 107 ~g~iD~lvnnAg 118 (271)
T 3v2g_A 107 LGGLDILVNSAG 118 (271)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCcEEEECCC
Confidence 257899998754
No 475
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=78.69 E-value=7.1 Score=32.99 Aligned_cols=83 Identities=16% Similarity=0.099 Sum_probs=53.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.++.+|-.|++ |.++..+++.+. .+.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. ...+...- ..
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56688878865 556666666552 36799999999887777666665433 4688999998653 11211100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 104 g~iD~lVnnAg 114 (283)
T 3v8b_A 104 GHLDIVVANAG 114 (283)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 58999998654
No 476
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=78.61 E-value=15 Score=27.25 Aligned_cols=78 Identities=5% Similarity=0.060 Sum_probs=51.0
Q ss_pred CEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCC--ceeEEEEcCCcc--ccHHHHHHHHHhhc
Q 023411 145 GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS--SYDFAFVDAEKR--MYQEYFELLLQLLL 220 (282)
Q Consensus 145 ~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~--~fDlV~id~~~~--~~~~~l~~~~~~~~ 220 (282)
.+|..+|-++...+..++.++..|.. +.....+..+.+..+. .. .+|+|++|.... .-.+.++.+++.
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~~--v~~~~~~~~~al~~l~----~~~~~~dliilD~~l~~~~g~~~~~~lr~~-- 108 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGFN--IIDTAADGEEAVIKYK----NHYPNIDIVTLXITMPKMDGITCLSNIMEF-- 108 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----HHGGGCCEEEECSSCSSSCHHHHHHHHHHH--
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHH----hcCCCCCEEEEeccCCCccHHHHHHHHHhh--
Confidence 37999999999999999999887642 3324556666555443 23 789999997643 234556666654
Q ss_pred CCCCC-cEEEEeC
Q 023411 221 QIRVG-GIIVIDN 232 (282)
Q Consensus 221 ~Lkpg-G~lv~dd 232 (282)
- ++ -++++.+
T Consensus 109 -~-~~~~ii~ls~ 119 (157)
T 3hzh_A 109 -D-KNARVIMISA 119 (157)
T ss_dssp -C-TTCCEEEEES
T ss_pred -C-CCCcEEEEec
Confidence 3 43 3555543
No 477
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=78.52 E-value=7.8 Score=32.60 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=55.2
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++.+|..+. ...+.+.- ..
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56788877765 556666666552 35799999999988887777776654 3588899987653 22221100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+++|+++..+.
T Consensus 108 g~iD~lvnnAg 118 (276)
T 3r1i_A 108 GGIDIAVCNAG 118 (276)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999998754
No 478
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=78.40 E-value=6.9 Score=30.81 Aligned_cols=72 Identities=25% Similarity=0.169 Sum_probs=48.1
Q ss_pred EEEEEcccccHHHHHHHHHCCCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCceeEE
Q 023411 122 RCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYDFA 199 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~fDlV 199 (282)
+||=.| |+|..+..+++.+-.. +|+.++.+++..+...+.+. . .++.+|..+. +..+... .+.+|.|
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~-----~--~~~~~D~~~~~~~~~~~~~--~~~id~v 70 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG-----A--RALPADLADELEAKALLEE--AGPLDLL 70 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT-----C--EECCCCTTSHHHHHHHHHH--HCSEEEE
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc-----C--cEEEeeCCCHHHHHHHHHh--cCCCCEE
Confidence 567666 5788899999988766 99999998876554444332 1 7777887653 2222211 1479999
Q ss_pred EEcCC
Q 023411 200 FVDAE 204 (282)
Q Consensus 200 ~id~~ 204 (282)
|..+.
T Consensus 71 i~~ag 75 (207)
T 2yut_A 71 VHAVG 75 (207)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98754
No 479
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=78.37 E-value=6.9 Score=39.66 Aligned_cols=76 Identities=13% Similarity=-0.028 Sum_probs=51.8
Q ss_pred CCEEEEEcccccHHHHHHHHHCCCCC--EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhC------C
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLPESG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN------G 191 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~~~~--~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~------~ 191 (282)
.-+++|+-||.|++++-+..+ +. .+.++|+++.+.+.-+.|+. ...++.+|+.++....... +
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A---G~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA---GISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH---TSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCeEEEeccCccHHHHHHHHC---CCCceEEEEECCHHHHHHHHHhCC------CCccccccHHHHhhhccchhhhhhhh
Confidence 448999999999999988775 33 57899999988776665542 2567888886654322110 0
Q ss_pred ----CCCceeEEEEcCC
Q 023411 192 ----EASSYDFAFVDAE 204 (282)
Q Consensus 192 ----~~~~fDlV~id~~ 204 (282)
..+.+|+|+...+
T Consensus 611 ~~lp~~~~vDll~GGpP 627 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGPP 627 (1002)
T ss_dssp CBCCCTTTCSEEEECCC
T ss_pred hhcccCCCeeEEEEcCC
Confidence 1246899986543
No 480
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=78.28 E-value=1.6 Score=37.08 Aligned_cols=45 Identities=20% Similarity=0.413 Sum_probs=28.2
Q ss_pred CceeEEEEcCC----ccccHHHH------HHHH-HhhcCCCCCcEEEEeCCCCCCc
Q 023411 194 SSYDFAFVDAE----KRMYQEYF------ELLL-QLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 194 ~~fDlV~id~~----~~~~~~~l------~~~~-~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
++||+||++.. .++|++=- +++. +-.+.|+|||.+++....+...
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR 265 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADR 265 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSH
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccccc
Confidence 89999999866 33343311 1111 1135599999999987755443
No 481
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=78.15 E-value=4.5 Score=37.11 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=25.9
Q ss_pred CEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHH
Q 023411 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAK 161 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~ 161 (282)
.+|--||+ ||.++.+|..+. .+.+|+++|++++.++..+
T Consensus 22 ~~IaViGl--GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGL--GYVGVVHAVGFALLGHRVVGYDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEcc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 47777876 555554444332 1468999999998776543
No 482
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=78.09 E-value=6 Score=34.47 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=52.8
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCCC--CC-EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCC
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLPE--SG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGE 192 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~~--~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~ 192 (282)
...++||-.| |+|.++..+++.+-. +. +|++++.++.......+.+. ..+++++.+|..+. +...
T Consensus 19 ~~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~----- 88 (344)
T 2gn4_A 19 LDNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYA----- 88 (344)
T ss_dssp TTTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHH-----
T ss_pred hCCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHH-----
Confidence 3467898776 468888887776532 44 89999998776554444332 24699999998763 2333
Q ss_pred CCceeEEEEcCCc
Q 023411 193 ASSYDFAFVDAEK 205 (282)
Q Consensus 193 ~~~fDlV~id~~~ 205 (282)
-..+|.||..+..
T Consensus 89 ~~~~D~Vih~Aa~ 101 (344)
T 2gn4_A 89 LEGVDICIHAAAL 101 (344)
T ss_dssp TTTCSEEEECCCC
T ss_pred HhcCCEEEECCCC
Confidence 3578999987763
No 483
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=77.86 E-value=7.3 Score=32.31 Aligned_cols=83 Identities=19% Similarity=0.146 Sum_probs=55.3
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.+++||-.|+ +|.++..+++.+ ..+.+|+.++.+++.++...+.+...+ .++.++.+|..+. ...+...- ..
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4568887775 566777777665 236799999999988877777776654 4689999988653 12111100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|.++..+.
T Consensus 105 g~id~lv~~Ag 115 (262)
T 3rkr_A 105 GRCDVLVNNAG 115 (262)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998754
No 484
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=77.78 E-value=12 Score=34.07 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=58.7
Q ss_pred EEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHH------------HHhCCCCcEEEEEcchhhHHHHHH
Q 023411 122 RCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYY------------ERAGVSHKVKIKHGLAADSLKALI 188 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~------------~~~g~~~~v~~~~gd~~~~l~~l~ 188 (282)
+|.=||+ |+.+..++..+.. +.+|+++|++++.++..++.. +..-...++++. .|..+ .
T Consensus 4 kI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~e----a- 75 (450)
T 3gg2_A 4 DIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQ----A- 75 (450)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHH----H-
T ss_pred EEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHH----H-
Confidence 6777877 5666665555432 468999999998776655411 000001224332 22221 1
Q ss_pred hCCCCCceeEEEEcCCcc----------ccHHHHHHHHHhhcCCCCCcEEEEeCCCCCCc
Q 023411 189 LNGEASSYDFAFVDAEKR----------MYQEYFELLLQLLLQIRVGGIIVIDNVLWHGK 238 (282)
Q Consensus 189 ~~~~~~~fDlV~id~~~~----------~~~~~l~~~~~~~~~LkpgG~lv~dd~~~~g~ 238 (282)
-...|+||+..+.. .....++.+.+. +++|.++|......+|.
T Consensus 76 ----~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~---l~~g~iVV~~STv~pgt 128 (450)
T 3gg2_A 76 ----VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRA---MSRYILIVTKSTVPVGS 128 (450)
T ss_dssp ----GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHH---CCSCEEEEECSCCCTTH
T ss_pred ----HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhh---CCCCCEEEEeeeCCCcc
Confidence 14579998865433 455566777777 88887777655544443
No 485
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=77.77 E-value=14 Score=30.79 Aligned_cols=83 Identities=13% Similarity=0.018 Sum_probs=54.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.+++||-.|+ +|.++..+++.+- .+.+|+.++.+++..+...+.++..+ .++.++.+|..+. +..+...- ..
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 4568887775 5667777776652 35799999999887776666666544 3689999997653 22211100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|.|+..+.
T Consensus 107 g~iD~li~~Ag 117 (272)
T 1yb1_A 107 GDVSILVNNAG 117 (272)
T ss_dssp CCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 57899998764
No 486
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=77.74 E-value=8.7 Score=32.55 Aligned_cols=85 Identities=24% Similarity=0.171 Sum_probs=56.5
Q ss_pred CCCEEEEEcccccHHHHHHHHHCCC-CC---EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC-
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLPE-SG---CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG- 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~~-~~---~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~- 191 (282)
.++++|-.|++ |.++..+++.+-. +. +|+.++.+++.++.+.+.+.......++.++.+|..+. ...+.+.-
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 56788988865 5566666655421 23 99999999988887777776654345689999988652 33333221
Q ss_pred -CCCceeEEEEcCC
Q 023411 192 -EASSYDFAFVDAE 204 (282)
Q Consensus 192 -~~~~fDlV~id~~ 204 (282)
..+.+|+++..+.
T Consensus 111 ~~~g~iD~lVnnAG 124 (287)
T 3rku_A 111 QEFKDIDILVNNAG 124 (287)
T ss_dssp GGGCSCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 1257999998754
No 487
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.74 E-value=4.1 Score=34.84 Aligned_cols=86 Identities=15% Similarity=0.184 Sum_probs=52.8
Q ss_pred CEEEEEcccccHHHHHHHHHCCC-CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEE
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV 199 (282)
.+|.=||+| ..+..++..+.. +.+|+++|.+++..+.+.+ .| +++ ..+ +.+. .. .|+|
T Consensus 16 ~~I~vIG~G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----~g----~~~-~~~----~~~~-----~~-aDvv 74 (296)
T 3qha_A 16 LKLGYIGLG--NMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----AG----ATL-ADS----VADV-----AA-ADLI 74 (296)
T ss_dssp CCEEEECCS--TTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH----TT----CEE-CSS----HHHH-----TT-SSEE
T ss_pred CeEEEECcC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----CC----CEE-cCC----HHHH-----Hh-CCEE
Confidence 468888875 555566655532 3589999999987665443 23 222 112 2233 35 8999
Q ss_pred EEcCCc-cccHHHHHHHHHhhcCCCCCcEEEE
Q 023411 200 FVDAEK-RMYQEYFELLLQLLLQIRVGGIIVI 230 (282)
Q Consensus 200 ~id~~~-~~~~~~l~~~~~~~~~LkpgG~lv~ 230 (282)
|+..+. ......++.+.+. +++|.+++-
T Consensus 75 i~~vp~~~~~~~v~~~l~~~---l~~g~ivv~ 103 (296)
T 3qha_A 75 HITVLDDAQVREVVGELAGH---AKPGTVIAI 103 (296)
T ss_dssp EECCSSHHHHHHHHHHHHTT---CCTTCEEEE
T ss_pred EEECCChHHHHHHHHHHHHh---cCCCCEEEE
Confidence 987663 3445556666666 888766554
No 488
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=77.73 E-value=7.5 Score=32.21 Aligned_cols=83 Identities=17% Similarity=0.092 Sum_probs=54.3
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.++++|-.|++ |.++..+++.+- .+.+|+.++.+++..+...+.+...+ .++.++.+|..+. ...+...- ..
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45678877765 556666665542 25799999999988877777776654 4589999988653 11111100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 88 g~id~lv~nAg 98 (256)
T 3gaf_A 88 GKITVLVNNAG 98 (256)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998754
No 489
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=77.71 E-value=7.7 Score=31.54 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=49.0
Q ss_pred CEEEEEcccccHHHHHHHHHCCC-C-CEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCCCCCce
Q 023411 121 QRCIEVGVYTGYSSLAIALVLPE-S-GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSY 196 (282)
Q Consensus 121 ~~VLEIG~G~G~~t~~la~~~~~-~-~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~~~~~f 196 (282)
++||-.| |+|.++..+++.+-. + .+|++++.+++.+.. -...+++++.+|..+. +.... ..+
T Consensus 24 k~vlVtG-atG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~-----~~~ 89 (236)
T 3qvo_A 24 KNVLILG-AGGQIARHVINQLADKQTIKQTLFARQPAKIHK--------PYPTNSQIIMGDVLNHAALKQAM-----QGQ 89 (236)
T ss_dssp EEEEEET-TTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS--------SCCTTEEEEECCTTCHHHHHHHH-----TTC
T ss_pred cEEEEEe-CCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc--------cccCCcEEEEecCCCHHHHHHHh-----cCC
Confidence 4777666 468888888877643 3 489999988764321 1124689999998653 33332 567
Q ss_pred eEEEEcCCcccc
Q 023411 197 DFAFVDAEKRMY 208 (282)
Q Consensus 197 DlV~id~~~~~~ 208 (282)
|.||........
T Consensus 90 D~vv~~a~~~~~ 101 (236)
T 3qvo_A 90 DIVYANLTGEDL 101 (236)
T ss_dssp SEEEEECCSTTH
T ss_pred CEEEEcCCCCch
Confidence 999987665443
No 490
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=77.30 E-value=6.5 Score=28.81 Aligned_cols=74 Identities=11% Similarity=0.134 Sum_probs=43.5
Q ss_pred CCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeE
Q 023411 120 AQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (282)
Q Consensus 120 ~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDl 198 (282)
.++|+=+|+ |..+..+++.+. .+.+|+.+|.+++..+.++ .. ...++.+|..+. ..+... ..+.+|+
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~----~~~~~~~d~~~~-~~l~~~-~~~~~d~ 73 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEE-NELLSL-GIRNFEY 73 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT----CSEEEECCTTCH-HHHHTT-TGGGCSE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh----CCEEEEeCCCCH-HHHHhc-CCCCCCE
Confidence 356888886 667766666552 2457999999876543221 11 135677776542 222111 1257899
Q ss_pred EEEcCCc
Q 023411 199 AFVDAEK 205 (282)
Q Consensus 199 V~id~~~ 205 (282)
|++....
T Consensus 74 vi~~~~~ 80 (144)
T 2hmt_A 74 VIVAIGA 80 (144)
T ss_dssp EEECCCS
T ss_pred EEECCCC
Confidence 9987664
No 491
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=77.06 E-value=11 Score=29.86 Aligned_cols=95 Identities=19% Similarity=0.154 Sum_probs=51.7
Q ss_pred EEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEE
Q 023411 122 RCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~ 200 (282)
+|+=+| +.|..+..++..+. .+.+|+.+|.+++..+...+.+...-....+. ..+..+.+ ...|+||
T Consensus 2 ~i~iiG-a~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~D~Vi 69 (212)
T 1jay_A 2 RVALLG-GTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT--GMKNEDAA---------EACDIAV 69 (212)
T ss_dssp EEEEET-TTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE--EEEHHHHH---------HHCSEEE
T ss_pred eEEEEc-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC--hhhHHHHH---------hcCCEEE
Confidence 566677 14566666655542 24689999999876655544322100001233 22322221 3579999
Q ss_pred EcCCccccHHHHHHHHHhhcCCCCCcEEEEeCC
Q 023411 201 VDAEKRMYQEYFELLLQLLLQIRVGGIIVIDNV 233 (282)
Q Consensus 201 id~~~~~~~~~l~~~~~~~~~LkpgG~lv~dd~ 233 (282)
+........+.++.+.+. + + |.++++..
T Consensus 70 ~~~~~~~~~~~~~~l~~~---~-~-~~~vi~~~ 97 (212)
T 1jay_A 70 LTIPWEHAIDTARDLKNI---L-R-EKIVVSPL 97 (212)
T ss_dssp ECSCHHHHHHHHHHTHHH---H-T-TSEEEECC
T ss_pred EeCChhhHHHHHHHHHHH---c-C-CCEEEEcC
Confidence 877655555566666555 6 4 55666543
No 492
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=77.03 E-value=20 Score=30.47 Aligned_cols=88 Identities=9% Similarity=0.076 Sum_probs=50.6
Q ss_pred cCCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+++|+=||+| ..+..+++.+. .+.+|+++|.+++..+.++ ..| ++.+. . +.+..+ -...
T Consensus 153 l~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g----~~~~~--~-~~l~~~-----l~~a 214 (293)
T 3d4o_A 153 IHGANVAVLGLG--RVGMSVARKFAALGAKVKVGARESDLLARIA----EMG----MEPFH--I-SKAAQE-----LRDV 214 (293)
T ss_dssp STTCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----SEEEE--G-GGHHHH-----TTTC
T ss_pred CCCCEEEEEeeC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC----CeecC--h-hhHHHH-----hcCC
Confidence 467899999975 44444444321 1469999999886543332 233 23222 1 223333 3678
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEE
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIV 229 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv 229 (282)
|+|++..+...... ..... ++||++++
T Consensus 215 DvVi~~~p~~~i~~---~~l~~---mk~~~~li 241 (293)
T 3d4o_A 215 DVCINTIPALVVTA---NVLAE---MPSHTFVI 241 (293)
T ss_dssp SEEEECCSSCCBCH---HHHHH---SCTTCEEE
T ss_pred CEEEECCChHHhCH---HHHHh---cCCCCEEE
Confidence 99998876443322 23345 88987665
No 493
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=77.03 E-value=18 Score=30.61 Aligned_cols=83 Identities=17% Similarity=0.157 Sum_probs=50.8
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCc--cHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDA--RSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-- 191 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~--~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~-- 191 (282)
.++++|-.|+ +|.++..+++.+- .+.+|+.++.+. ...+...+.++..+ .++.++.+|..+. ...+.+.-
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4568888886 4566667666652 357899988863 34455555555544 4588999887652 11111100
Q ss_pred CCCceeEEEEcCC
Q 023411 192 EASSYDFAFVDAE 204 (282)
Q Consensus 192 ~~~~fDlV~id~~ 204 (282)
..+.+|+++..+.
T Consensus 125 ~~g~iD~lv~nAg 137 (294)
T 3r3s_A 125 ALGGLDILALVAG 137 (294)
T ss_dssp HHTCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 0257899998754
No 494
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=76.96 E-value=1 Score=37.57 Aligned_cols=86 Identities=14% Similarity=0.201 Sum_probs=49.1
Q ss_pred EEEEEcccccHHHHHHHHHCCC-CC----EEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 122 RCIEVGVYTGYSSLAIALVLPE-SG----CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 122 ~VLEIG~G~G~~t~~la~~~~~-~~----~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
+|.=||+| ..+..++..+.. +. +|+.+|.+++..+...+.+ | ++. ..+..+.. ...
T Consensus 4 ~i~iIG~G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g----~~~-~~~~~e~~---------~~a 64 (247)
T 3gt0_A 4 QIGFIGCG--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---G----LTT-TTDNNEVA---------KNA 64 (247)
T ss_dssp CEEEECCS--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---C----CEE-CSCHHHHH---------HHC
T ss_pred eEEEECcc--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---C----CEE-eCChHHHH---------HhC
Confidence 57778875 444444444321 22 7999999988766554432 3 222 22222222 346
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEE
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIV 229 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv 229 (282)
|+||+........+.++.+.+. +++|.+++
T Consensus 65 DvVilav~~~~~~~v~~~l~~~---l~~~~~vv 94 (247)
T 3gt0_A 65 DILILSIKPDLYASIINEIKEI---IKNDAIIV 94 (247)
T ss_dssp SEEEECSCTTTHHHHC---CCS---SCTTCEEE
T ss_pred CEEEEEeCHHHHHHHHHHHHhh---cCCCCEEE
Confidence 9999887666666666666665 78877655
No 495
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=76.94 E-value=8.5 Score=32.78 Aligned_cols=84 Identities=17% Similarity=0.073 Sum_probs=54.4
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHH--HHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~l~~~~--~~ 193 (282)
.+++||-.|+ +|.++..+++.+ ..+.+|+.++.+++.++.+.+.+...+. .++.++.+|..+.. ..+...- ..
T Consensus 40 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4567887775 456666666655 2357999999999887777766655442 36899999986531 1111100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 118 g~iD~lvnnAg 128 (293)
T 3rih_A 118 GALDVVCANAG 128 (293)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998754
No 496
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=76.65 E-value=8.6 Score=31.94 Aligned_cols=84 Identities=18% Similarity=0.144 Sum_probs=54.9
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.++++|-.|+ +|.++..+++.+- .+.+|+.++.+++.++.+.+.++..+. .++.++.+|..+. ...+.+.- ..
T Consensus 9 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4567887775 4666777666652 357999999999888777777765442 3689999998653 12211100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 87 g~id~lvnnAg 97 (262)
T 3pk0_A 87 GGIDVVCANAG 97 (262)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999998754
No 497
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=76.45 E-value=22 Score=30.21 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=50.3
Q ss_pred cCCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCce
Q 023411 118 LGAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (282)
Q Consensus 118 ~~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~f 196 (282)
..+++|+=||+| ..+..+++.+ ..+.+|+++|.+++..+.+. ..| ++.+.. +.+..+ -...
T Consensus 155 l~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g----~~~~~~---~~l~~~-----l~~a 216 (300)
T 2rir_A 155 IHGSQVAVLGLG--RTGMTIARTFAALGANVKVGARSSAHLARIT----EMG----LVPFHT---DELKEH-----VKDI 216 (300)
T ss_dssp STTSEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----CEEEEG---GGHHHH-----STTC
T ss_pred CCCCEEEEEccc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCC----CeEEch---hhHHHH-----hhCC
Confidence 467899999985 4444444332 12469999999876543332 223 233221 223333 3678
Q ss_pred eEEEEcCCccccHHHHHHHHHhhcCCCCCcEEE
Q 023411 197 DFAFVDAEKRMYQEYFELLLQLLLQIRVGGIIV 229 (282)
Q Consensus 197 DlV~id~~~~~~~~~l~~~~~~~~~LkpgG~lv 229 (282)
|+|+...+...... ..... ++||++++
T Consensus 217 DvVi~~~p~~~i~~---~~~~~---mk~g~~li 243 (300)
T 2rir_A 217 DICINTIPSMILNQ---TVLSS---MTPKTLIL 243 (300)
T ss_dssp SEEEECCSSCCBCH---HHHTT---SCTTCEEE
T ss_pred CEEEECCChhhhCH---HHHHh---CCCCCEEE
Confidence 99998876543321 23355 88887654
No 498
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=76.42 E-value=16 Score=26.88 Aligned_cols=80 Identities=14% Similarity=0.041 Sum_probs=51.2
Q ss_pred CCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHHhCCCCCceeEEEEcCCccc--cHHHHHHHHHhhcC
Q 023411 144 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--YQEYFELLLQLLLQ 221 (282)
Q Consensus 144 ~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~l~~~~~~~~fDlV~id~~~~~--~~~~l~~~~~~~~~ 221 (282)
..+|..+|-++...+..++.+...+... +.....+..+.+..+. ...+|+|++|..... -.+.++.+.+.
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~----~~~~dlii~d~~l~~~~g~~~~~~l~~~--- 86 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSVN-VVGEADDGAAALELIK----AHLPDVALLDYRMPGMDGAQVAAAVRSY--- 86 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSEE-EEEEESSHHHHHHHHH----HHCCSEEEEETTCSSSCHHHHHHHHHHT---
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCeE-EEEEeCCHHHHHHHHH----hcCCCEEEEeCCCCCCCHHHHHHHHHhc---
Confidence 4689999999999988899898876321 2223556655555443 357999999976432 34455556553
Q ss_pred CCCC-cEEEEeC
Q 023411 222 IRVG-GIIVIDN 232 (282)
Q Consensus 222 Lkpg-G~lv~dd 232 (282)
.|. -++++.+
T Consensus 87 -~~~~~ii~~s~ 97 (152)
T 3eul_A 87 -ELPTRVLLISA 97 (152)
T ss_dssp -TCSCEEEEEES
T ss_pred -CCCCeEEEEEc
Confidence 344 3555543
No 499
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=76.38 E-value=8.6 Score=32.19 Aligned_cols=83 Identities=16% Similarity=0.058 Sum_probs=54.3
Q ss_pred CCCEEEEEcccccHHHHHHHHHC-CCCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.++++|-.|++ |.++..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. ...+...- ..
T Consensus 3 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34678877765 55666666655 236799999999988887777776654 3588888887652 12211100 02
Q ss_pred CceeEEEEcCC
Q 023411 194 SSYDFAFVDAE 204 (282)
Q Consensus 194 ~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 80 g~iD~lVnnAG 90 (264)
T 3tfo_A 80 GRIDVLVNNAG 90 (264)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998754
No 500
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=76.24 E-value=14 Score=30.77 Aligned_cols=83 Identities=13% Similarity=0.113 Sum_probs=53.6
Q ss_pred CCCEEEEEcccccHHHHHHHHHCC-CCCEEEEEecCccHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHHhCC--CC
Q 023411 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (282)
Q Consensus 119 ~~~~VLEIG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~l~~~~--~~ 193 (282)
.++++|-.|+ +|.++..+++.+- .+.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. ...+...- ..
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4568887776 5666777666652 35799999999887766666565543 3588899887652 12211100 01
Q ss_pred -CceeEEEEcCC
Q 023411 194 -SSYDFAFVDAE 204 (282)
Q Consensus 194 -~~fDlV~id~~ 204 (282)
+.+|+++..+.
T Consensus 97 ~g~id~lv~nAg 108 (273)
T 1ae1_A 97 DGKLNILVNNAG 108 (273)
T ss_dssp TSCCCEEEECCC
T ss_pred CCCCcEEEECCC
Confidence 67899998754
Done!