Query 023414
Match_columns 282
No_of_seqs 105 out of 1197
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 06:23:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023414.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023414hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2opw_A Phyhd1 protein; double- 100.0 2.4E-51 8.2E-56 362.5 20.0 278 4-281 1-291 (291)
2 2fct_A Syringomycin biosynthes 100.0 5E-38 1.7E-42 280.0 21.0 236 1-273 4-275 (313)
3 2a1x_A Phytanoyl-COA dioxygena 100.0 4.7E-38 1.6E-42 279.6 18.7 238 4-271 20-266 (308)
4 3emr_A ECTD; double stranded b 100.0 1.5E-38 5.2E-43 282.6 13.2 221 5-260 33-270 (310)
5 3gja_A CYTC3; halogenase, beta 100.0 1.4E-37 4.9E-42 277.5 17.1 224 4-267 9-271 (319)
6 2rdq_A 1-deoxypentalenic acid 100.0 3.9E-34 1.3E-38 251.9 13.6 220 6-260 17-254 (288)
7 3nnf_A CURA; non-HAEM Fe(II)/a 100.0 2.5E-30 8.6E-35 220.1 6.6 224 4-266 22-281 (344)
8 2dbn_A Hypothetical protein YB 99.6 1.3E-14 4.3E-19 131.5 14.6 222 5-259 112-407 (461)
9 2hbt_A EGL nine homolog 1; pro 98.8 2.5E-07 8.5E-12 78.9 16.3 82 147-259 128-214 (247)
10 2jig_A Prolyl-4 hydroxylase; h 98.4 8E-06 2.7E-10 68.5 14.1 94 147-259 108-218 (224)
11 3itq_A Prolyl 4-hydroxylase, a 98.2 3.7E-05 1.3E-09 64.0 13.7 165 16-259 37-213 (216)
12 3dkq_A PKHD-type hydroxylase S 98.2 4.3E-06 1.5E-10 70.8 7.9 84 147-259 109-196 (243)
13 2rg4_A Uncharacterized protein 97.7 0.00042 1.4E-08 57.6 12.3 133 108-259 70-208 (216)
14 3kt7_A PKHD-type hydroxylase T 97.3 0.0025 8.5E-08 60.0 11.8 122 111-259 97-229 (633)
15 3s57_A Alpha-ketoglutarate-dep 91.9 4.2 0.00014 32.8 15.7 39 218-256 158-201 (204)
16 1e5r_A Proline oxidase; oxidor 87.8 0.96 3.3E-05 38.8 6.1 103 116-257 74-176 (290)
17 3pl0_A Uncharacterized protein 83.8 7.1 0.00024 32.7 9.4 37 223-259 203-248 (254)
18 3qh6_A CT296; iron, modeling; 82.4 6.2 0.00021 29.3 7.4 42 5-46 5-46 (157)
19 2iuw_A Alkylated repair protei 81.3 5.1 0.00018 33.1 7.7 43 217-259 184-231 (238)
20 1ds1_A Clavaminate synthase 1; 81.3 1.8 6E-05 37.6 5.0 40 219-258 259-302 (324)
21 1otj_A Alpha-ketoglutarate-dep 80.3 1.9 6.5E-05 36.5 4.8 41 218-258 234-275 (283)
22 1nx8_A CARC, carbapenem syntha 79.8 2.2 7.6E-05 35.8 5.0 40 217-256 229-270 (273)
23 3eat_X Pyoverdine biosynthesis 79.8 1.9 6.5E-05 36.9 4.6 41 218-258 240-281 (293)
24 1oih_A Putative alkylsulfatase 78.6 2.1 7.2E-05 36.6 4.5 41 218-258 243-284 (301)
25 3rcq_A Aspartyl/asparaginyl be 75.8 6.1 0.00021 31.8 6.2 39 221-260 147-185 (197)
26 3r1j_A Alpha-ketoglutarate-dep 74.2 5 0.00017 34.5 5.7 40 219-258 237-277 (301)
27 3pvj_A Alpha-ketoglutarate-dep 72.8 3.7 0.00013 34.8 4.5 39 219-257 233-272 (277)
28 3i3q_A Alpha-ketoglutarate-dep 72.5 36 0.0012 27.4 10.5 41 219-259 155-204 (211)
29 2wbq_A L-arginine beta-hydroxy 71.9 4.3 0.00015 35.6 4.8 40 219-258 296-339 (358)
30 2og5_A Putative oxygenase; non 70.4 4.7 0.00016 35.5 4.7 40 219-258 291-334 (357)
31 1jr7_A GABT protein, hypotheti 68.0 8.5 0.00029 33.2 5.7 43 217-259 256-303 (311)
32 2opk_A Hypothetical protein; p 66.4 3.4 0.00011 29.7 2.5 35 222-256 75-109 (112)
33 1gp6_A Leucoanthocyanidin diox 61.7 42 0.0014 29.3 9.1 96 144-282 223-331 (356)
34 3o2g_A Gamma-butyrobetaine dio 61.3 8.6 0.00029 34.2 4.7 41 218-259 327-370 (388)
35 1w9y_A 1-aminocyclopropane-1-c 59.6 44 0.0015 28.7 8.8 92 150-282 174-279 (319)
36 1o4t_A Putative oxalate decarb 58.1 9.3 0.00032 28.1 3.7 23 220-242 96-118 (133)
37 1o5u_A Novel thermotoga mariti 57.7 1.5 5.1E-05 31.2 -0.9 22 221-242 69-90 (101)
38 2gu9_A Tetracenomycin polyketi 56.8 11 0.00036 26.2 3.7 22 221-242 63-84 (113)
39 1v70_A Probable antibiotics sy 55.5 10 0.00035 25.7 3.4 22 221-242 68-89 (105)
40 2q4a_A Clavaminate synthase-li 53.7 5.6 0.00019 34.4 2.0 25 219-243 293-318 (330)
41 3cew_A Uncharacterized cupin p 52.9 13 0.00043 26.7 3.6 38 221-259 67-104 (125)
42 3ht1_A REMF protein; cupin fol 52.8 13 0.00045 27.2 3.8 24 220-243 79-102 (145)
43 3h8u_A Uncharacterized conserv 52.4 9.2 0.00032 27.4 2.8 22 221-242 80-101 (125)
44 1x82_A Glucose-6-phosphate iso 51.8 11 0.00037 29.8 3.3 25 218-242 117-141 (190)
45 4i4a_A Similar to unknown prot 51.8 8.8 0.0003 27.6 2.6 37 221-258 73-109 (128)
46 2fqp_A Hypothetical protein BP 49.9 13 0.00046 25.4 3.2 27 220-247 59-85 (97)
47 1lr5_A Auxin binding protein 1 48.7 17 0.00058 27.5 3.9 25 219-243 87-111 (163)
48 1vj2_A Novel manganese-contain 47.9 13 0.00045 26.8 3.0 23 221-243 87-109 (126)
49 2oa2_A BH2720 protein; 1017534 47.9 11 0.00037 28.2 2.6 23 220-242 88-110 (148)
50 2bnm_A Epoxidase; oxidoreducta 45.5 14 0.00047 29.0 3.0 23 220-242 162-184 (198)
51 2ozj_A Cupin 2, conserved barr 45.3 12 0.0004 26.4 2.3 22 221-242 77-98 (114)
52 2b8m_A Hypothetical protein MJ 45.2 9.8 0.00034 26.9 1.9 20 223-242 69-88 (117)
53 2arc_A ARAC, arabinose operon 45.1 16 0.00056 27.2 3.3 40 220-259 56-95 (164)
54 3kgz_A Cupin 2 conserved barre 44.3 13 0.00045 28.4 2.6 22 221-242 83-104 (156)
55 1y9q_A Transcriptional regulat 42.6 16 0.00054 28.5 2.9 29 220-249 144-172 (192)
56 2i45_A Hypothetical protein; n 41.9 14 0.00048 25.6 2.3 22 221-242 68-89 (107)
57 3jzv_A Uncharacterized protein 41.5 17 0.00058 28.1 2.9 22 221-242 92-113 (166)
58 3l2h_A Putative sugar phosphat 40.7 22 0.00074 26.9 3.4 22 221-242 87-109 (162)
59 3i7d_A Sugar phosphate isomera 40.6 23 0.00078 27.0 3.5 23 221-243 84-108 (163)
60 1zrr_A E-2/E-2' protein; nicke 40.5 42 0.0015 26.2 5.1 39 218-259 120-158 (179)
61 1odm_A Isopenicillin N synthas 39.7 1.1E+02 0.0037 26.2 8.1 31 9-42 30-61 (331)
62 3d82_A Cupin 2, conserved barr 39.5 16 0.00053 24.8 2.2 22 221-242 69-90 (102)
63 1vr3_A Acireductone dioxygenas 38.9 39 0.0013 26.9 4.6 45 218-266 125-169 (191)
64 3lqv_P Splicing factor 3B subu 38.7 19 0.00064 20.7 1.9 21 3-23 19-39 (39)
65 2q30_A Uncharacterized protein 37.3 19 0.00065 24.7 2.4 22 221-242 75-96 (110)
66 2fho_A Spliceosomal protein SF 35.7 23 0.00077 21.3 2.1 22 3-24 18-39 (47)
67 2f4p_A Hypothetical protein TM 35.5 12 0.00041 28.1 1.1 21 222-242 89-109 (147)
68 4e2g_A Cupin 2 conserved barre 34.9 36 0.0012 24.1 3.6 23 221-243 80-102 (126)
69 3ibm_A Cupin 2, conserved barr 34.0 22 0.00075 27.3 2.4 22 221-242 95-116 (167)
70 2pfw_A Cupin 2, conserved barr 32.4 23 0.0008 24.7 2.2 22 221-242 73-94 (116)
71 2xlg_A SLL1785 protein, CUCA; 32.4 41 0.0014 27.6 4.0 37 219-256 101-137 (239)
72 3fjs_A Uncharacterized protein 31.8 25 0.00086 24.9 2.3 22 221-242 75-96 (114)
73 3es1_A Cupin 2, conserved barr 31.4 38 0.0013 26.4 3.4 36 221-259 119-154 (172)
74 4gjz_A Lysine-specific demethy 31.4 21 0.00071 28.5 2.0 26 217-242 198-223 (235)
75 2o8q_A Hypothetical protein; c 30.8 21 0.00071 25.9 1.7 23 220-242 83-105 (134)
76 2k1g_A Lipoprotein SPR; soluti 30.6 19 0.00065 26.9 1.4 13 222-234 66-78 (135)
77 1fi2_A Oxalate oxidase, germin 30.2 29 0.001 27.4 2.6 24 219-242 118-141 (201)
78 1sef_A Conserved hypothetical 29.8 28 0.00097 29.0 2.6 39 221-259 103-142 (274)
79 1sfn_A Conserved hypothetical 29.7 22 0.00076 29.2 1.9 24 220-243 204-227 (246)
80 1yhf_A Hypothetical protein SP 29.4 28 0.00096 24.2 2.2 23 221-243 79-101 (115)
81 1sef_A Conserved hypothetical 29.3 21 0.00072 29.8 1.7 24 220-243 221-244 (274)
82 4e2q_A Ureidoglycine aminohydr 26.8 23 0.00078 29.8 1.4 30 221-250 226-255 (266)
83 3h7j_A Bacilysin biosynthesis 26.4 40 0.0014 27.5 2.9 38 220-259 184-221 (243)
84 1g6u_A Domain swapped dimer; d 26.4 89 0.003 17.8 3.4 28 11-45 8-35 (48)
85 3pbi_A Invasion protein; pepti 25.6 22 0.00074 28.9 1.0 11 223-233 158-168 (214)
86 1sq4_A GLXB, glyoxylate-induce 25.3 53 0.0018 27.5 3.5 34 221-254 109-142 (278)
87 1rc6_A Hypothetical protein YL 24.5 30 0.001 28.5 1.8 33 221-253 219-252 (261)
88 2pyt_A Ethanolamine utilizatio 24.1 39 0.0013 24.8 2.2 22 220-241 93-114 (133)
89 2kz3_A Putative uncharacterize 23.5 15 0.00053 25.0 -0.2 29 3-31 8-36 (83)
90 3bcw_A Uncharacterized protein 23.0 40 0.0014 24.5 2.0 23 221-243 88-110 (123)
91 3ne0_A Resuscitation promoting 22.8 37 0.0013 27.5 1.9 12 222-233 157-168 (214)
92 3lwc_A Uncharacterized protein 22.7 44 0.0015 24.0 2.2 21 221-241 78-98 (119)
93 4diq_A Lysine-specific demethy 22.3 1.2E+02 0.004 27.9 5.3 39 218-257 226-264 (489)
94 1qwr_A Mannose-6-phosphate iso 22.1 73 0.0025 27.3 3.8 24 220-243 158-181 (319)
95 1sq4_A GLXB, glyoxylate-induce 22.1 51 0.0017 27.6 2.7 38 220-258 230-268 (278)
96 3eqe_A Putative cystein deoxyg 22.0 81 0.0028 24.4 3.7 37 220-259 117-153 (171)
97 3rns_A Cupin 2 conserved barre 22.0 56 0.0019 26.3 2.9 34 220-254 191-224 (227)
98 3al5_A HTYW5, JMJC domain-cont 21.9 75 0.0026 27.4 3.9 40 218-260 238-277 (338)
99 4h7l_A Uncharacterized protein 21.8 50 0.0017 25.3 2.3 21 221-241 87-107 (157)
100 3oox_A Putative 2OG-Fe(II) oxy 21.4 1.1E+02 0.0037 25.9 4.8 37 9-45 24-61 (312)
101 2vqa_A SLL1358 protein, MNCA; 20.8 69 0.0024 27.5 3.5 23 220-242 278-300 (361)
No 1
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=100.00 E-value=2.4e-51 Score=362.50 Aligned_cols=278 Identities=47% Similarity=0.824 Sum_probs=230.1
Q ss_pred CCCCCHHHHHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCC--CceeeecCcc--cc--ccccccccccccccee
Q 023414 4 AGNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCS--TSSVFSTTNQ--QK--VTDDYFYESAEKISFF 77 (282)
Q Consensus 4 ~~~lt~~~~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~--~~~~~~~~~~--~~--~~~~~f~~~~~~i~~~ 77 (282)
|..||++++++|+++||+||+++|++++|++++++++++++..... ....|.+... .+ ..++||+.+++.++++
T Consensus 1 m~~Lt~e~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~y~l~~~~~~~~~ 80 (291)
T 2opw_A 1 MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSGDKIRFF 80 (291)
T ss_dssp -CCCCHHHHHHHHHHSEEEETTSSCHHHHHHHHHHHHHHHHTCCCCGGGSSCCCSHHHHHHHHHHHHHHHHTTTTSEEEE
T ss_pred CCcCCHHHHHHHHhCCEEEecCCCCHHHHHHHHHHHHHHHhhcccccCCcceecccccchhhccccccccccCCCceeee
Confidence 4689999999999999999999999999999999999998774211 1123432110 00 2356888888999999
Q ss_pred ecccccCCCCCcccccccccccccccccccCHHHHhhhcChhHHHHHHHhCCCCccccccceeeeCCCCCCCCcccCCCC
Q 023414 78 FEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNS 157 (282)
Q Consensus 78 ~e~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~~~~~~llg~~~~~~~s~~~~~~p~~~~~~~wH~D~~ 157 (282)
||+++++.+|.+..++...+|+++|.++..++.|.+++.+|+|++++++|+|++++++++++++|+|+.+..++||||..
T Consensus 81 ~e~~~~~~~g~~~~~~~~~in~i~~~~~~~~~~f~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~k~Pg~~~~~~wHqD~~ 160 (291)
T 2opw_A 81 FEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDAS 160 (291)
T ss_dssp ECTTSBCTTSCBSSCGGGSEEEEEECHHHHCHHHHHHHTCHHHHHHHHHHTCSSEEEEEEEEECCCTTTBCCEEEECGGG
T ss_pred cccccccccCcccCchhhhhhhhhhHhhhhCHHHHHHhcCHHHHHHHHHhcCCCccchheeEEecCCCCCCCcCCeeCCc
Confidence 99999999998777766778999888888899999999999999999999999999999999999999877789999999
Q ss_pred CCcCCCC-cceEEeeeeeecCCcCceEEEEcCCCCCCcceeeeeCC-C--Ce-eecCCCCCCCCCCeEEeeecCceEEEE
Q 023414 158 FLITEPS-TCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFIRGE-E--GV-YFDRPPPSYDQNDFVPIEVKAGSLVLI 232 (282)
Q Consensus 158 ~~~~~p~-~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~~v~~~~~~Gdvvlf 232 (282)
||..+|. ..+++||+|+|++++||||+|+||||+++...++.+.. + +. .+..++..+...+++.++++|||+|||
T Consensus 161 ~~~~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~~~f 240 (291)
T 2opw_A 161 FLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLI 240 (291)
T ss_dssp TSCEESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGGCEEECBCTTCEEEE
T ss_pred ccccCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCCeeecccCCCcEEEE
Confidence 9977776 89999999999999999999999999997665544332 1 11 132222334445689999999999999
Q ss_pred eCccccCCCCCCCCCCceEEEEEEEeCCCcccCCCCccccCCC--CCCCCC
Q 023414 233 HGDLIHQSFENQSSKSRHAYSLHVVETDGCRWSQENWIRRKVE--PEPLYA 281 (282)
Q Consensus 233 ~~~~~H~s~~n~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 281 (282)
|++++|+|++|.|+.+|++++++|++++++.|.+++|++++++ |+.||+
T Consensus 241 ~~~~~H~s~~N~s~~~R~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 291 (291)
T 2opw_A 241 HGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLYT 291 (291)
T ss_dssp ETTCEEEECCBCSSSCCCEEEEEEEECTTCEECTTSSCCCCSSCCCCBSCC
T ss_pred cCCceecCCCCCCCCceEEEEEEEEcCCCCccCccccccCCCCCCcccccC
Confidence 9999999999999999999999999986789999999999865 777774
No 2
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=100.00 E-value=5e-38 Score=279.98 Aligned_cols=236 Identities=21% Similarity=0.311 Sum_probs=176.7
Q ss_pred CCCCCCCCHHHHHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCCCceeeecCcccccccccccccccccceeecc
Q 023414 1 MGLAGNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEE 80 (282)
Q Consensus 1 ~~~~~~lt~~~~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~i~~~~e~ 80 (282)
|.....||++++++|+++||+||+++|++++|+++++++++.+..... ..|...+
T Consensus 4 ~~~~~~Lt~e~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~l~~~~~---~~~~~~~---------------------- 58 (313)
T 2fct_A 4 MSKKFALTAEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDRSA---AAYQDLD---------------------- 58 (313)
T ss_dssp --CTTCCCHHHHHHHHHHSEEEEEESSCHHHHHHHHHHHHHHHTCCTT---CSCCCCC----------------------
T ss_pred ccccCCCCHHHHHHHHhCCEEECCCCCCHHHHHHHHHHHHHHHhcccc---ccccccc----------------------
Confidence 556778999999999999999999999999999999999887643211 2232110
Q ss_pred cccCCCCCcccccccccccccccccccCHHHHhhhcChhHHHHHHHhCCCCccccccceeeeCCCCCCCCcccCCCCCCc
Q 023414 81 KAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLI 160 (282)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~~~~~~llg~~~~~~~s~~~~~~p~~~~~~~wH~D~~~~~ 160 (282)
.++.++.. ..+ ..+..++.|.+++.+|+|++++++|+|++++++++++++|+|+.+. ++||||..||.
T Consensus 59 -~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~p~l~~~~~~llG~~~~~~~~~~~~k~Pg~~~-~~wHqD~~~~~ 126 (313)
T 2fct_A 59 -AISGGTNI-----ANY-----DRHLDDDFLASHICRPEICDRVESILGPNVLCWRTEFFPKYPGDEG-TDWHQADTFAN 126 (313)
T ss_dssp -C----CGG-----GGB-----CGGGTCHHHHHHTTCHHHHHHHHHHHCSCEEEEEEEEEEECTTCCE-ECCBCCSSSCT
T ss_pred -ccCCccch-----hcc-----ccccccHHHHHHHcChHHHHHHHHHcCCCeEeeeeeEEEeCCCCCC-CCccccccccc
Confidence 00001100 001 1134578999999999999999999999999999999999998654 69999999876
Q ss_pred CC--CC----------cceEEeeeeeecCCcCceEEEEcCCCCCCccee---eeeC-C-------CC--eee---c----
Q 023414 161 TE--PS----------TCTGLWLALEDATIINGCLWAIPGSHKNGLVRR---FIRG-E-------EG--VYF---D---- 208 (282)
Q Consensus 161 ~~--p~----------~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~---~~~~-~-------~~--~~~---~---- 208 (282)
.+ |. ..+++||+|+|++++||||+|+||||++..... +... + .+ ..+ +
T Consensus 127 ~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l 206 (313)
T 2fct_A 127 ASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDETKRMTYEPDANNSVVKDGVRRGFFGYDYRQL 206 (313)
T ss_dssp TTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCTTSCCBCTTSCCCCCTTTCSSCEETTEEEEBTTBCGGGG
T ss_pred cCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcCCCcCCccccccccccChhhhhhhhhccccccccccchhhh
Confidence 44 21 479999999999999999999999999864321 1100 0 01 011 0
Q ss_pred CCCCCC--CCCCeEEeeecCceEEEEeCccccCCCCCC--CCCCceEEEEEEEeCCCcccCCCCccccC
Q 023414 209 RPPPSY--DQNDFVPIEVKAGSLVLIHGDLIHQSFENQ--SSKSRHAYSLHVVETDGCRWSQENWIRRK 273 (282)
Q Consensus 209 ~~~~~~--~~~~~v~~~~~~Gdvvlf~~~~~H~s~~n~--s~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 273 (282)
..++.+ ...+++.++++|||++|||++++|+|++|. ++.+|++++++|++.+...|..++|++..
T Consensus 207 ~~~~~~~~~~~~~v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~R~a~~~~y~~~~~~~~~~~~~~~~~ 275 (313)
T 2fct_A 207 QIDENWKPDEASAVPMQMKAGQFIIFWSTLMHASYPHSGESQEMRMGFASRYVPSFVHVYPDSDHIEEY 275 (313)
T ss_dssp BSSTTCCCCGGGCEEECBCTTEEEEEETTSEEEECCBCSSSSSCEEEEEEEEEETTSEESTTCSEEEET
T ss_pred ccccccCCccCceeEeeeCCceEEEEeCCceeeCCCCCCCCCCceEEEEEEEECCCceEcCCCCccccC
Confidence 001111 235679999999999999999999999999 89999999999999976789999998865
No 3
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=100.00 E-value=4.7e-38 Score=279.60 Aligned_cols=238 Identities=24% Similarity=0.385 Sum_probs=171.4
Q ss_pred CCCCCHHHHHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCCC-ceeeecCcccccccccccccccccceeecccc
Q 023414 4 AGNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCST-SSVFSTTNQQKVTDDYFYESAEKISFFFEEKA 82 (282)
Q Consensus 4 ~~~lt~~~~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~~~~~i~~~~e~~~ 82 (282)
+..||++++++|+++||++|+++|++++|++++++++++++...... ...+. + +. +..
T Consensus 20 ~~~Lt~e~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~---------~--------~~--~~~-- 78 (308)
T 2a1x_A 20 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMR---------D--------VT--ISK-- 78 (308)
T ss_dssp C--CCSTHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEEC---------C--------EE--ECC--
T ss_pred CCCCCHHHHHHHHhCCEEEccCCCCHHHHHHHHHHHHHHHhccccCCCccccc---------c--------cc--ccc--
Confidence 46799999999999999999999999999999999999987642111 01110 0 00 000
Q ss_pred cCCCCCcccccccccccccccccccCHHHHhhhcChhHHHHHHHhCCCCccccccceeeeCCCCCCC---CcccCCCCCC
Q 023414 83 FGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGE---VVPHQDNSFL 159 (282)
Q Consensus 83 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~~~~~~llg~~~~~~~s~~~~~~p~~~~~---~~wH~D~~~~ 159 (282)
+. ..+....++++++ +..++.|.+++.+|+|++++++|+|+++++++++++.|+|+.+.. ++||||..||
T Consensus 79 ---~~--~~~~~~~~~~~~~--~~~~~~~~~l~~~p~l~~~~~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~ 151 (308)
T 2a1x_A 79 ---SE--YAPSEKMITKVQD--FQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYF 151 (308)
T ss_dssp ---CE-------EECCEEEC--CTTSHHHHHHHHCHHHHHHHHHHHCSSEEEEEEEEEEECCC--------CCBCGGGGC
T ss_pred ---cc--cCchHHHHhhhhh--hhhCHHHHHHHhCHHHHHHHHHhcCCCcceecceEEEcCCCCCCCccCCCCccCCccc
Confidence 00 0011122344443 245899999999999999999999999888899999999987643 5899999999
Q ss_pred cCCCC-cceEEeeeeeecCCcCceEEEEcCCCCCCcceeee-eCCCCe--eecCCCCCCC-CCCeEEeeecCceEEEEeC
Q 023414 160 ITEPS-TCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFI-RGEEGV--YFDRPPPSYD-QNDFVPIEVKAGSLVLIHG 234 (282)
Q Consensus 160 ~~~p~-~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~~~-~~~~~~--~~~~~~~~~~-~~~~v~~~~~~Gdvvlf~~ 234 (282)
+..|. ..+++||||+|++++||||+|+||||+.+..++.. ...++. .+... +.+. ..+++.++++|||++||++
T Consensus 152 ~~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~aGd~vlf~~ 230 (308)
T 2a1x_A 152 PFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGI-QDYEENKARVHLVMEKGDTVFFHP 230 (308)
T ss_dssp CEECGGGEEEEEEESSCBCTTBTCEEECTTGGGSCCCCCCC-----------CCC-CC-CCCSCCEEECBCTTCEEEECT
T ss_pred cCCCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCccccccccccccCccccccCC-ccccccCCeEEccCCCccEEEECC
Confidence 77664 68999999999999999999999999987553211 111111 11111 1122 2568999999999999999
Q ss_pred ccccCCCCCCCCCCceEEEEEEEeCCCcccCCCCccc
Q 023414 235 DLIHQSFENQSSKSRHAYSLHVVETDGCRWSQENWIR 271 (282)
Q Consensus 235 ~~~H~s~~n~s~~~R~~~~~~~~~~~~~~~~~~~~~~ 271 (282)
+++|+|++|.|+.+|++++++|++. ++.|....+..
T Consensus 231 ~~~H~s~~N~s~~~R~~~~~~y~~~-~~~y~~~~~~~ 266 (308)
T 2a1x_A 231 LLIHGSGQNKTQGFRKAISCHFASA-DCHYIDVKGTS 266 (308)
T ss_dssp TCCEEECCBCSSSCEEEEEEEEEET-TCEECCCTTSG
T ss_pred CccccCCCCCCCCceEEEEEEEECC-CceEccCCCCc
Confidence 9999999999999999999999998 47777665433
No 4
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=100.00 E-value=1.5e-38 Score=282.56 Aligned_cols=221 Identities=21% Similarity=0.234 Sum_probs=166.6
Q ss_pred CCCCHHHHHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCCCceeeecCcccccccccccccccccceeecccccC
Q 023414 5 GNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAFG 84 (282)
Q Consensus 5 ~~lt~~~~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~i~~~~e~~~~~ 84 (282)
..||++|+++|+++||++|+++|++++|++++++++++++....... .+. . +++
T Consensus 33 ~~LT~eqi~~f~~dGyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~-~~~----------~-----------~~~---- 86 (310)
T 3emr_A 33 APITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVAS-DKV----------I-----------REP---- 86 (310)
T ss_dssp SSSCHHHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCC-TTE----------E-----------ECT----
T ss_pred CCCCHHHHHHHHhCCEEEccCCCCHHHHHHHHHHHHHHHhcccccCC-ccc----------e-----------ecC----
Confidence 78999999999999999999999999999999999999876432110 000 0 000
Q ss_pred CCCCcccccccccccccccccccCHHHHhhhcChhHHHHHHHhCCCCccccccceeeeCCCCCCCCcccCCCCCCcCC--
Q 023414 85 DDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITE-- 162 (282)
Q Consensus 85 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~~~~~~llg~~~~~~~s~~~~~~p~~~~~~~wH~D~~~~~~~-- 162 (282)
+|. .+.++ +.++..++.|.+++.+|+|++++++|+|.+++++++++++|+|+.+..++||||..||+..
T Consensus 87 -~~~-------~~r~~-~~~~~~~~~f~~l~~~p~l~~i~~~llG~~~~l~~s~~~~k~p~~g~~~~wHqD~~~~~~~~g 157 (310)
T 3emr_A 87 -ESN-------DIRSI-FHVHQDDNYFQDVANDKRILDIVRHLLGSDVYVHQSRINYKPGFKGKEFDWHSDFETWHVEDG 157 (310)
T ss_dssp -TTC-------CEEEE-ECHHHHCHHHHHHHTCHHHHHHHHHHHTSCEEEEEEEEECCCTTCCCCEEEECHHHHHHHHHC
T ss_pred -CCc-------ceeEE-eehhhccHHHHHHHhChHHHHHHHHHcCCceEEEeeEEEEcCCCCCCCCCcCCCCccccccCC
Confidence 010 01111 1245678999999999999999999999999999999999999877788999999988543
Q ss_pred -C-CcceEEeeeeeecCCcCceEEEEcCCCCCCcceee-eeCCC------CeeecCCCCC-----CCCCC-eEEeeecCc
Q 023414 163 -P-STCTGLWLALEDATIINGCLWAIPGSHKNGLVRRF-IRGEE------GVYFDRPPPS-----YDQND-FVPIEVKAG 227 (282)
Q Consensus 163 -p-~~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~~-~~~~~------~~~~~~~~~~-----~~~~~-~v~~~~~~G 227 (282)
| ...+++||+|+|++++||||+||||||++...+.- ..... ...+..++.. ....+ ++.++++||
T Consensus 158 ~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~~g~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aG 237 (310)
T 3emr_A 158 MPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAG 237 (310)
T ss_dssp CCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEECCC-----------------CCCHHHHHHHHHHHTSCBCCCBSTT
T ss_pred CcccceEEEEEEecCCCCcCCCEEEEeCCCCCcccccccccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCc
Confidence 3 37899999999999999999999999998643200 00000 0001111100 01123 788999999
Q ss_pred eEEEEeCccccCCCCCCCCCCceEEEEEEEeCC
Q 023414 228 SLVLIHGDLIHQSFENQSSKSRHAYSLHVVETD 260 (282)
Q Consensus 228 dvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~~ 260 (282)
|++||+++++|+|++|.|+.+|++++++|++.+
T Consensus 238 dvl~f~~~~~H~s~~N~S~~~R~~l~~~y~~~~ 270 (310)
T 3emr_A 238 SVTLFESNTMHGSTSNITPYPRNNLFMVYNSVK 270 (310)
T ss_dssp CEEEEETTCCEEECCCCSSCCCCEEEEEEEEGG
T ss_pred eEEEEeCCceecCCCCCCCCCeEEEEEEEeCCc
Confidence 999999999999999999999999999999974
No 5
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=100.00 E-value=1.4e-37 Score=277.46 Aligned_cols=224 Identities=19% Similarity=0.260 Sum_probs=162.8
Q ss_pred CCCCCHHHHHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCCCceeeecCcccccccccccccccccceeeccccc
Q 023414 4 AGNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAF 83 (282)
Q Consensus 4 ~~~lt~~~~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~i~~~~e~~~~ 83 (282)
...||++|+++|+++||++|+++|++++++++++++++.+..... ..+...
T Consensus 9 ~~~Lt~eq~~~f~~~Gyv~i~~~l~~~~v~~l~~~i~~~l~~~~~---~~~~~~-------------------------- 59 (319)
T 3gja_A 9 NFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSL---AIYPDS-------------------------- 59 (319)
T ss_dssp CCCCCHHHHHHHHHHSEEEEEESSCHHHHHHHHHHHHHHHHCCTT---CSSCSC--------------------------
T ss_pred CCCCCHHHHHHHHHCCEEECcCCCCHHHHHHHHHHHHHHhhcCcc---ccccCC--------------------------
Confidence 578999999999999999999999999999999999986643211 111100
Q ss_pred CCCCCcccccccccccccccccccCHHHHhhhcChhHHHHHHHhCCCCccccccceeeeCCCCCCCCcccCCCCCCcCC-
Q 023414 84 GDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITE- 162 (282)
Q Consensus 84 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~~~~~~llg~~~~~~~s~~~~~~p~~~~~~~wH~D~~~~~~~- 162 (282)
.|.. ...+ ..++..++.|.+++.+|+|++++++|+|++++++++++++|+|+.+. ++||||..||..+
T Consensus 60 --~g~~----~~~~----~~~~~~~~~f~~l~~~p~l~~~~~~llG~~~~~~~s~~~~k~Pg~~~-~~wHqD~~y~~~~g 128 (319)
T 3gja_A 60 --NGKA----NISN----YDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEFFPKYQGDEG-TDWHQAATFAHATG 128 (319)
T ss_dssp --SSHH----HHTT----TTGGGTCHHHHHHHHCHHHHHHHHHHHCSSEEEEEEEEEEECTTCCC-EEEEEECCBCTTTC
T ss_pred --Cccc----hhhh----hhhcccCHHHHHHHcChHHHHHHHHHcCCceEEeeeeEeecCCCCCC-CCcccCCcccccCC
Confidence 0000 0000 12346689999999999999999999999999999999999998766 7999999887543
Q ss_pred ------C------C--cceEEeeeeeecCCcCceEEEEcCCCCCCcceee----eeCC-------CC--eeecC------
Q 023414 163 ------P------S--TCTGLWLALEDATIINGCLWAIPGSHKNGLVRRF----IRGE-------EG--VYFDR------ 209 (282)
Q Consensus 163 ------p------~--~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~~----~~~~-------~~--~~~~~------ 209 (282)
| . ..+++||+|+|++++||||+||||||+++..+.. +..+ .+ ..+..
T Consensus 129 ~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l 208 (319)
T 3gja_A 129 KPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHTSMNYDESKGMDYDADAINQREKDGIKRGFFGYDYRSL 208 (319)
T ss_dssp CBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSCC---CEECCC------------------------------
T ss_pred CccccCccccccccccceEEEEEEeccCCCcCcCEEEEeCCccCcccCcccccccCchhhhhhccccccccccccchhhh
Confidence 2 1 3699999999999999999999999999854211 0000 00 00100
Q ss_pred C-CCC--CCCCCeEEeeecCceEEEEeCccccCCCCCC--CCCCceEEEEEEEeCCCcccCCC
Q 023414 210 P-PPS--YDQNDFVPIEVKAGSLVLIHGDLIHQSFENQ--SSKSRHAYSLHVVETDGCRWSQE 267 (282)
Q Consensus 210 ~-~~~--~~~~~~v~~~~~~Gdvvlf~~~~~H~s~~n~--s~~~R~~~~~~~~~~~~~~~~~~ 267 (282)
+ ++. ....+++.++|+|||+||||++++|+|++|. |+.+|++++++|++.+...|...
T Consensus 209 ~~~~~~~~~~~~~v~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R~a~~~~y~~~~~~~~~~~ 271 (319)
T 3gja_A 209 QKDPDWKPDESQAYPMVLKPGEAVIFWSNTMHASLPHTGSKTDYRMGFAARYVPTQVQVYPGT 271 (319)
T ss_dssp ------------CCBCCBCTTEEEEEETTSCEEECCCCSCTTCCEEEEEEEEEETTSEESCSC
T ss_pred ccccccccccCceeEeeECCCeEEEEcCCccccCCCCCCCCCCcEEEEEEEEECCCceECCCC
Confidence 0 011 1235689999999999999999999999999 89999999999999865556543
No 6
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=100.00 E-value=3.9e-34 Score=251.88 Aligned_cols=220 Identities=17% Similarity=0.208 Sum_probs=153.2
Q ss_pred CCCHHH--HHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCCCceeeecCcccccccccccccccccceeeccccc
Q 023414 6 NLNSDN--LNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAF 83 (282)
Q Consensus 6 ~lt~~~--~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~i~~~~e~~~~ 83 (282)
.||+++ +++|+++||+||+++|++++|++++++++++++.......+.. .+.++. +.+++.
T Consensus 17 ~ls~~~~~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~p~~~--------~~~~~~------~~~~~~--- 79 (288)
T 2rdq_A 17 LLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMREGLVALGAADPHAT--------LEELTI------DSFESV--- 79 (288)
T ss_dssp GTTCHHHHHHHHHHHSEEEECSCSCHHHHHHHHHHHHHHHHHHSCCCTTCC--------TTTCCC------SCSTTS---
T ss_pred ccCCHHHHHHHHHhCCEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCCCCCC--------cchhhh------hhhccc---
Confidence 467665 9999999999999999999999999999998875211000000 001110 000100
Q ss_pred CCCCCcccccccccccccccccccCHHHHhhhcChhHHHHHHHhCCCCccccccceeeeCCC--------CCCCCcccCC
Q 023414 84 GDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPG--------IGGEVVPHQD 155 (282)
Q Consensus 84 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~~~~~~llg~~~~~~~s~~~~~~p~--------~~~~~~wH~D 155 (282)
.... +...+.|.+++.+|+|++++++|+|.+++++.+.++.+.|+ .+..++||||
T Consensus 80 ---------~~~~--------~~~~~~~~~l~~~p~l~~~~~~llG~~~~l~~~~~~~~~p~~~~~k~p~~g~~~~wHqD 142 (288)
T 2rdq_A 80 ---------DEVA--------MHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQD 142 (288)
T ss_dssp ---------CHHH--------HHHHCCHHHHHTSHHHHHHHHHHHSSCEEEEEEEEEEEECCCTTCSSCCCTTSCCSBCH
T ss_pred ---------cccc--------ccchHHHHHHHcCHHHHHHHHHHhCCCceeeeeeeeeecCCcccccccCcCCCcCcccc
Confidence 0000 01123789999999999999999998877765554433333 2667899999
Q ss_pred CCCCcCCCCcceEEeeeeeecCCcCceEEEEcCCCCCCcceeee----eCCCCe-eecCCCCCCCCCCeEEeeecCceEE
Q 023414 156 NSFLITEPSTCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFI----RGEEGV-YFDRPPPSYDQNDFVPIEVKAGSLV 230 (282)
Q Consensus 156 ~~~~~~~p~~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~v~~~~~~Gdvv 230 (282)
..||...+ ..+++||+|+|++++||||+||||||+++..+... +..+.. .............++.++++|||++
T Consensus 143 ~~~~~~~~-~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGdv~ 221 (288)
T 2rdq_A 143 GFYIGPNQ-DFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDIL 221 (288)
T ss_dssp HHHSCSCC-CCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECCCCCTTCEE
T ss_pred ccccCCCC-CeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccCceeecccCCCCEE
Confidence 98876433 68999999999999999999999999998654311 111110 0110001122345789999999999
Q ss_pred EEeCccccCCCCCCCCC---CceEEEEEEEeCC
Q 023414 231 LIHGDLIHQSFENQSSK---SRHAYSLHVVETD 260 (282)
Q Consensus 231 lf~~~~~H~s~~n~s~~---~R~~~~~~~~~~~ 260 (282)
||+++++|+|++|.|+. .|+++.++|++++
T Consensus 222 lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~~ 254 (288)
T 2rdq_A 222 LFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPAK 254 (288)
T ss_dssp EEETTCCEEEECCCCCTTCCCEEEEEEEEEETT
T ss_pred EEeCCceecCCCCCCCCccceEEEEEEEEecCc
Confidence 99999999999999984 4689999999984
No 7
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=99.96 E-value=2.5e-30 Score=220.08 Aligned_cols=224 Identities=17% Similarity=0.209 Sum_probs=149.3
Q ss_pred CCCCCHHHHHH----hhhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCCCceeeecCcccccccccccccccccceeec
Q 023414 4 AGNLNSDNLNF----FNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFE 79 (282)
Q Consensus 4 ~~~lt~~~~~~----f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~i~~~~e 79 (282)
.+.|+++|+++ |+++||++|+++|++++|++++++++.+-.........+. |. +
T Consensus 22 ~~~l~~~qve~~~~~fE~eGYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~-------------------i~---~ 79 (344)
T 3nnf_A 22 SNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVT-------------------LK---L 79 (344)
T ss_dssp ---CCSHHHHHHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHH-------------------HH---T
T ss_pred cCcCCHHHHHHHHhhhccCceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccce-------------------ec---C
Confidence 46799999999 9999999999999999999999999998655322111000 00 0
Q ss_pred ccccCCCCCcccccccccccccccccccCHHHHhh--hcChhHHHHHHHhCCCCccccccceeeeCCCCCCCCcccCCCC
Q 023414 80 EKAFGDDGNLKQPKELSINKVGHALHELDPVFKKF--SRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNS 157 (282)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~p~i~~~~~~llg~~~~~~~s~~~~~~p~~~~~~~wH~D~~ 157 (282)
+ | +..+..+- |..+....+. ...+++++++++|+|++.++.+++.+.+.|| +..++||+|..
T Consensus 80 ~------~------s~~lrs~~---H~~~~f~~h~~s~l~~rll~vl~~LlG~el~i~qs~~fe~kPG-~KGFpWH~D~~ 143 (344)
T 3nnf_A 80 G------G------IDDIDTND---HAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNALFSVEPN-HKGLPWHVGVG 143 (344)
T ss_dssp T------S------CCCCBCSE---EEECSSCHHHHHHHHGGGHHHHHHHHTSCEEEEEEEEEEECBT-CCBSCSBCTTT
T ss_pred C------C------ccchhccc---ccchhHHHHHHHHHHHHHHHHHHHHhCCceeeeecceEeeCCC-CCCCCceeccc
Confidence 0 0 01111111 1222222222 2234999999999999999999998888888 57789999987
Q ss_pred CCcCC--CCcceEEeeeeeecCC-cCceEEEEcCCCCCCcce---------eeeeCCC-Ceeec----CC-----CCC--
Q 023414 158 FLITE--PSTCTGLWLALEDATI-INGCLWAIPGSHKNGLVR---------RFIRGEE-GVYFD----RP-----PPS-- 213 (282)
Q Consensus 158 ~~~~~--p~~~v~~~i~L~d~~~-~~G~l~~ipGSH~~~~~~---------~~~~~~~-~~~~~----~~-----~~~-- 213 (282)
++... +..++++||+|+++++ .||||.+||+|+..+... +.+..+. ..... .. .+.
T Consensus 144 ~F~~~~~eD~a~S~WIpLd~i~~e~nGGM~~VP~s~~Sgs~~y~~~d~~~~~~Lk~qe~~~sLee~la~~~gi~~~~~~~ 223 (344)
T 3nnf_A 144 SFSFTKTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDLHLKNNIKWDESQGDLNEYVANANTIYNKITED 223 (344)
T ss_dssp TTTTBCTTSCEEEEEEESSCBCTTTBCSEEEECTTTCCTHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHCCCHHHHCCHH
T ss_pred ccccccCCCCeEEEEEECCCCCccCCCceEEecCcccCcceeeecchHHHHHHhhccCCcccHHHHHHhhcCcccCcccc
Confidence 33222 3489999999999995 999999999555444110 0011110 00000 00 010
Q ss_pred -C---CCCCeEEeeecCceEEEEeCccccCCCCCC--CCCCceEEEEEEEeCCCcccCC
Q 023414 214 -Y---DQNDFVPIEVKAGSLVLIHGDLIHQSFENQ--SSKSRHAYSLHVVETDGCRWSQ 266 (282)
Q Consensus 214 -~---~~~~~v~~~~~~Gdvvlf~~~~~H~s~~n~--s~~~R~~~~~~~~~~~~~~~~~ 266 (282)
+ -+...+...+++||+|+||.+++||+.++. +...|+++.+||... +..|+.
T Consensus 224 ~i~~~le~~~~ewd~epGDav~F~~~tlHga~plgn~~~~rRRAfS~RfvGD-Daryd~ 281 (344)
T 3nnf_A 224 VIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRLVDY-DTRVDE 281 (344)
T ss_dssp HHHHHHTTCEEECCBCTTCEEEEETTCEEEECCBCTTSCSCEEEEEEEEEET-TCBBCH
T ss_pred ccchhhhhhhccccCCCCcEEEEecceeecCCCCCCCCccceeEEEEEEecC-cceehH
Confidence 0 124567889999999999999999999544 456889999999996 567775
No 8
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=99.60 E-value=1.3e-14 Score=131.49 Aligned_cols=222 Identities=18% Similarity=0.189 Sum_probs=140.9
Q ss_pred CCCCHHHHHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCCCceeeecCcccccccccccccccccceeecccccC
Q 023414 5 GNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAFG 84 (282)
Q Consensus 5 ~~lt~~~~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~i~~~~e~~~~~ 84 (282)
+.+|+++++.+++.||+||+|+|+++++.++.+++.+.++..... ..+.. ..+++| + ++.
T Consensus 112 ~~~s~~~~~~ir~rG~vVIRgvvp~e~A~~~~~~~~~yl~~n~~~--~t~~~-----p~d~~~-~---~l~--------- 171 (461)
T 2dbn_A 112 GHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFD--EVYKG-----PGDNFF-G---TLS--------- 171 (461)
T ss_dssp TCCCHHHHHHHHHHSEEEEETSSCHHHHHHHHHHHHHHHHHTTHH--HHC------------------------------
T ss_pred CCCCHHHHHHHHhccEEEECCCCCHHHHHHHHHHHHHHHHhCCCc--ccccC-----cccccc-c---cCC---------
Confidence 568999999999999999999999999999999999999775210 01100 001111 0 000
Q ss_pred CCCCcccccccccccccccccccCHHHHhhhcChhHHHHHH---HhCCC--Ccccc---------ccceeeeCCCCCC-C
Q 023414 85 DDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLH---SLGYK--RPVDI---------QSMYIFKQPGIGG-E 149 (282)
Q Consensus 85 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~~~~~---~llg~--~~~~~---------~s~~~~~~p~~~~-~ 149 (282)
.....+..+ --++.-.+...||.|+++.+ +|-.. +...+ -+++..++|+... .
T Consensus 172 -------~~~p~~y~~-----Yws~~Q~~AR~hP~v~~aq~fln~LW~~~s~~~~~vs~d~~~~YaDR~riR~Pg~~~~~ 239 (461)
T 2dbn_A 172 -------ASRPEIYPI-----YWSQAQMQARQSEEMANAQSFLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKG 239 (461)
T ss_dssp ---------CCEEECC-----CCCHHHHHHHTSHHHHHHHHHHHTTSBCEETTEECCEEEEECCCCCCEEECCTTCCBCC
T ss_pred -------CCCCcEEEe-----eCCHHHHHHhcChhHHHHHHHHHHhhCCCCCCcceecCCCCcccccccccCCCCCCcCC
Confidence 000111111 12588889999999999999 44332 21111 1456677887643 4
Q ss_pred CcccCCCC--------------------CC-cCCC--------------------C--cceEEeeeeeecCCcCceEEEE
Q 023414 150 VVPHQDNS--------------------FL-ITEP--------------------S--TCTGLWLALEDATIINGCLWAI 186 (282)
Q Consensus 150 ~~wH~D~~--------------------~~-~~~p--------------------~--~~v~~~i~L~d~~~~~G~l~~i 186 (282)
...|.|.. .| ..+| . +++|.|++|+++.++.|+|+|+
T Consensus 240 l~pHvD~GSlERWe~~~y~~vY~~If~G~WedyDPwda~~R~~a~~y~~~~~~~Cs~FR~fQGwlaLS~~gP~eGtL~v~ 319 (461)
T 2dbn_A 240 LGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVV 319 (461)
T ss_dssp EEEEECSCSTHHHHCHHHHHHTHHHHTSCGGGCCTTBCTTGGGCCCCCCC---CCCSCCSEEEEEESSCBCTTSSCEEEC
T ss_pred CCcccCCCchhhcccchhhHHHHHhhcCCccccCcccccccccceecccCCCCcccccceeeeehhccCCCCCCCcEEEe
Confidence 56799982 22 1122 1 5699999999999999999999
Q ss_pred cCCCCCC---cceeeeeCC------C---CeeecCCCCC---CCCCCeEEeeecCceEEEEeCccccCCCCCC-CCCCce
Q 023414 187 PGSHKNG---LVRRFIRGE------E---GVYFDRPPPS---YDQNDFVPIEVKAGSLVLIHGDLIHQSFENQ-SSKSRH 250 (282)
Q Consensus 187 pGSH~~~---~~~~~~~~~------~---~~~~~~~~~~---~~~~~~v~~~~~~Gdvvlf~~~~~H~s~~n~-s~~~R~ 250 (282)
| +++.. +++.+++.. | +......+.. ........+.++|||.|+||++++|+..++. ++..|.
T Consensus 320 P-~~~atAY~LLRpFf~~~~d~~~~Ga~pg~~q~~~~~~HP~L~~~mv~iP~vePGD~V~WH~D~iH~V~~~h~g~~~s~ 398 (461)
T 2dbn_A 320 P-IPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGN 398 (461)
T ss_dssp S-CTTHHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHHTTCEECCCBCTTCEEEEETTCCEEECCBSSCCSCCC
T ss_pred e-chhhHHHHhhhhhhccCCcccccCCCCCcccCCCcccCCcccCceeeCCCCCCCCEEEEcCCCccccccCCCCCccee
Confidence 9 86511 122332210 0 1111000111 1123355567999999999999999997765 568999
Q ss_pred EEEEEEEeC
Q 023414 251 AYSLHVVET 259 (282)
Q Consensus 251 ~~~~~~~~~ 259 (282)
++++.++|.
T Consensus 399 V~YIpa~P~ 407 (461)
T 2dbn_A 399 VMYIPAAPM 407 (461)
T ss_dssp EEECCBCEE
T ss_pred EEEecCCCC
Confidence 999999887
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=98.79 E-value=2.5e-07 Score=78.88 Aligned_cols=82 Identities=23% Similarity=0.317 Sum_probs=62.5
Q ss_pred CCCCcccCCCCCCcCCCCcceEEeeeeeec---CCcCceEEEEcCCCCCCcceeeeeCCCCeeecCCCCCCCCCCeEEee
Q 023414 147 GGEVVPHQDNSFLITEPSTCTGLWLALEDA---TIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIE 223 (282)
Q Consensus 147 ~~~~~wH~D~~~~~~~p~~~v~~~i~L~d~---~~~~G~l~~ipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 223 (282)
|....||.|... ...+.+++.+||.|- ...+|.|++.|.. ......+.
T Consensus 128 G~~y~~H~D~~~---~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~--------------------------~~~~~~v~ 178 (247)
T 2hbt_A 128 GTGYVRHVDNPN---GDGRCVTCIYYLNKDWDAKVSGGILRIFPEG--------------------------KAQFADIE 178 (247)
T ss_dssp SCCEEEECSSCS---CCSEEEEEEEECBTTCCHHHHBCCEEECCTT--------------------------CSSCEEEC
T ss_pred CCcccccccCCC---CCCceEEEEEEeCCCCCCCCCceeEEEecCC--------------------------CCceEEEE
Confidence 455789999832 334789999999985 3467888876542 01235678
Q ss_pred ecCceEEEEeCc--cccCCCCCCCCCCceEEEEEEEeC
Q 023414 224 VKAGSLVLIHGD--LIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 224 ~~~Gdvvlf~~~--~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
.++|.+|+|.+. ++|++.+ +...|++++.+|...
T Consensus 179 P~~grlv~F~s~~~~~H~V~p--~~~~R~sit~W~~~~ 214 (247)
T 2hbt_A 179 PKFDRLLFFWSDRRNPHEVQP--AYATRYAITVWYFDA 214 (247)
T ss_dssp CBTTEEEEEECSTTCCEEECC--BSSCEEEEEEEEEEH
T ss_pred cCCCEEEEEecCCCceeeecc--CCCEEEEEEEEEcCC
Confidence 899999999986 8999998 457999999999775
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=98.38 E-value=8e-06 Score=68.45 Aligned_cols=94 Identities=12% Similarity=0.143 Sum_probs=63.0
Q ss_pred CCCCcccCCCCCCcC------CCCcceEEeeeeeecCCcCceEEEEcCCCCCCcceeeeeCCCCeeecCCCCCCCC--CC
Q 023414 147 GGEVVPHQDNSFLIT------EPSTCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQ--ND 218 (282)
Q Consensus 147 ~~~~~wH~D~~~~~~------~p~~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 218 (282)
|..+.+|.|...-.. ...+.+|+.+||.|+. ++|.|.| |....... . ..+.. ..
T Consensus 108 G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~-~GGeT~F-p~~~~~~~---------~-------~~~~~c~~~ 169 (224)
T 2jig_A 108 GQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVE-EGGETVL-PNAEQKVT---------G-------DGWSECAKR 169 (224)
T ss_dssp TCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCS-EECCEEE-TTSSSCCC---------S-------TTSCTTGGG
T ss_pred CccccCcccCCCCccccccccCCCeEEEEEEEecCCC-CCCceeC-CCcccccc---------c-------ccccccccC
Confidence 455789999854321 1237799999999975 6777777 54321100 0 01111 23
Q ss_pred eEEeeecCceEEEEeC---------ccccCCCCCCCCCCceEEEEEEEeC
Q 023414 219 FVPIEVKAGSLVLIHG---------DLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~---------~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
.+.+..++|++|||.+ +++|++.+.. ...|++++.++...
T Consensus 170 ~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~-~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTL-KGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEE-ESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEeeCCCCCCCCCCcccCCccc-cceEEEEEEeEEcC
Confidence 5788999999999965 8999999974 34689888888654
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=98.19 E-value=3.7e-05 Score=63.96 Aligned_cols=165 Identities=16% Similarity=0.107 Sum_probs=95.0
Q ss_pred hhCcEEEEcCCCCHHHHHHHHHHHHHHHcccCCCCceeeecCcccccccccccccccccceeecccccCCCCCccccccc
Q 023414 16 NSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAFGDDGNLKQPKEL 95 (282)
Q Consensus 16 ~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~i~~~~e~~~~~~~g~~~~~~~~ 95 (282)
.+-..++++|||+++|++.|.+..+..+....-. .... ...+| .+.+
T Consensus 37 ~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~----~~~~-------------~~~~R--------tS~~-------- 83 (216)
T 3itq_A 37 EEPLIVVLGNVLSDEECDELIELSKSKLARSKVG----SSRD-------------VNDIR--------TSSG-------- 83 (216)
T ss_dssp TTTTEEEEESCSCHHHHHHHHHHHHHHHC------------C-------------CCCGG--------GTTC--------
T ss_pred CCCCEEEECCcCCHHHHHHHHHHhhcccccceec----cCCc-------------cCCcE--------eeee--------
Confidence 3567789999999999999999998765442100 0000 00010 0000
Q ss_pred ccccccccccccCHHHHhhhcChhHHHHHHHhCCCCccccccceeeeCCCCCCCCcccCCCCCCcC---CCCcceEEeee
Q 023414 96 SINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLIT---EPSTCTGLWLA 172 (282)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~p~i~~~~~~llg~~~~~~~s~~~~~~p~~~~~~~wH~D~~~~~~---~p~~~v~~~i~ 172 (282)
.....++... +|.+.+.+++|-+.......-+.+-. .|....+|.|...-.. ...+.+|+.+|
T Consensus 84 -------~wl~~~~~v~------~i~~Ri~~~~gl~~~~~E~lqv~~Y~-~G~~y~~H~D~~~~~~~~~~~~R~~T~l~Y 149 (216)
T 3itq_A 84 -------AFLDDNELTA------KIEKRISSIMNVPASHGEGLHILNYE-VDQQYKAHYDYFAEHSRSAANNRISTLVMY 149 (216)
T ss_dssp -------EECCCCHHHH------HHHHHHHHHHTSCGGGBCCCEEEEEC-BTCCEEEECSSCCTTSGGGGGCEEEEEEEE
T ss_pred -------EEeCCcHHHH------HHHHHHHHhcCceeccccceeEEEeC-CCCccccccCCCcCCCcccCCceEEEEEEe
Confidence 0011133332 34455555555332211111122222 2455789999864321 12367999999
Q ss_pred eeecCCcCceEEEEcCCCCCCcceeeeeCCCCeeecCCCCCCCCCCeEEeeecCceEEEEeC---------ccccCCCCC
Q 023414 173 LEDATIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSLVLIHG---------DLIHQSFEN 243 (282)
Q Consensus 173 L~d~~~~~G~l~~ipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdvvlf~~---------~~~H~s~~n 243 (282)
|.|+ .++|.+.| |. ..+.+..++|++|||.+ +++|++.+.
T Consensus 150 Lnd~-~~GGeT~F-p~-----------------------------~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV 198 (216)
T 3itq_A 150 LNDV-EEGGETFF-PK-----------------------------LNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPV 198 (216)
T ss_dssp CSCC-SEECCEEE-TT-----------------------------TTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCE
T ss_pred cccC-CcCceeEe-cC-----------------------------CCCEEecCCCeEEEEeccCCCCCCCCcccccccee
Confidence 9997 35666655 21 02457889999999998 799999997
Q ss_pred CCCCCceEEEEEEEeC
Q 023414 244 QSSKSRHAYSLHVVET 259 (282)
Q Consensus 244 ~s~~~R~~~~~~~~~~ 259 (282)
.. ..|++++.++...
T Consensus 199 ~~-G~K~v~~~W~~~~ 213 (216)
T 3itq_A 199 TK-GEKWIATQWVRRG 213 (216)
T ss_dssp EE-SCEEEEEEEEESS
T ss_pred cc-ccEEEEEeeEecC
Confidence 53 4688888887653
No 12
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=98.17 E-value=4.3e-06 Score=70.79 Aligned_cols=84 Identities=26% Similarity=0.165 Sum_probs=60.0
Q ss_pred CCCCcccCCCCCCcCC--C-CcceEEeeeeeecC-CcCceEEEEcCCCCCCcceeeeeCCCCeeecCCCCCCCCCCeEEe
Q 023414 147 GGEVVPHQDNSFLITE--P-STCTGLWLALEDAT-IINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPI 222 (282)
Q Consensus 147 ~~~~~wH~D~~~~~~~--p-~~~v~~~i~L~d~~-~~~G~l~~ipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 222 (282)
|..+.||.|....... . .+.+++.+||+|.. .++|.|.|... .....+
T Consensus 109 G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~----------------------------~~~~~V 160 (243)
T 3dkq_A 109 GETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT----------------------------YGQQSI 160 (243)
T ss_dssp TCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET----------------------------TEEEEE
T ss_pred CCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC----------------------------CCcEEE
Confidence 4557899998653221 1 25789999999853 35566665432 012457
Q ss_pred eecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 023414 223 EVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 223 ~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
..++|++|+|.+.++|++.+.. ...|++++.++..-
T Consensus 161 ~P~~G~~v~F~s~~lH~v~pV~-~G~R~~~~~Wi~s~ 196 (243)
T 3dkq_A 161 KLSAGSLVLYPSSSLHQVTPVL-SGERTAAFMWLQSM 196 (243)
T ss_dssp CCCTTCEEEEETTSEEEECCEE-EECEEEEEEEEEES
T ss_pred ecCCCEEEEECCCCeEcCcccc-ccCEEEEEEehhhc
Confidence 7889999999999999999963 45799999988754
No 13
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=97.74 E-value=0.00042 Score=57.61 Aligned_cols=133 Identities=13% Similarity=0.024 Sum_probs=80.2
Q ss_pred CHHHHhhhc--ChhHHHHHHHhC-CC---CccccccceeeeCCCCCCCCcccCCCCCCcCCCCcceEEeeeeeecCCcCc
Q 023414 108 DPVFKKFSR--SEKTSNLLHSLG-YK---RPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEPSTCTGLWLALEDATIING 181 (282)
Q Consensus 108 ~~~~~~l~~--~p~i~~~~~~ll-g~---~~~~~~s~~~~~~p~~~~~~~wH~D~~~~~~~p~~~v~~~i~L~d~~~~~G 181 (282)
+|.|..|.. .+.+..+++++. +. ++.+..+-+++-.+| .....|.|. ...++..+||+ +..++|
T Consensus 70 ~p~~~~L~~~i~~~~~~~~~~l~~~~~~~~~~i~~~W~~~~~~G--~~~~~H~H~-------~~~lSgV~Yl~-~p~~~G 139 (216)
T 2rg4_A 70 FPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIWINILPEG--GVHGSHIHP-------HSVISGTTYVA-MPEGTS 139 (216)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCTTCCCEEEEEEEEEECTT--CCEEEECCT-------TCSEEEEEEEE-CCSCSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEeeEEEEEcCCC--CcccCccCC-------CCeEEEEEEEE-CCCCCc
Confidence 567766553 456777777763 22 222212223333333 334788773 34678888887 566788
Q ss_pred eEEEEcCCCCCCcceeeeeCCCCeeecCCCCCCCCCCeEEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 023414 182 CLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 182 ~l~~ipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
.|.+........... . . ...+........+.+..++|++|||-+.++|++.+|.++..|.++.+.+...
T Consensus 140 ~L~f~~p~~~~~~~~----~----~-~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~~~ 208 (216)
T 2rg4_A 140 ALKLEDPRLPFMMAA----P----T-RRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWG 208 (216)
T ss_dssp CEEEECTTGGGCSSS----C----C-CCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEEC-
T ss_pred cEEEeCCcccccccc----C----c-ccccCcccCCCeeEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEeecC
Confidence 998873211100000 0 0 0000001112345789999999999999999999999999999999988875
No 14
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=97.25 E-value=0.0025 Score=60.03 Aligned_cols=122 Identities=15% Similarity=0.119 Sum_probs=81.1
Q ss_pred HHhhhcChhHHHHHHHhCCC-Ccc--ccccceeeeCCCCCCCCcccCCCCCCcCCCCcceEEeeeeeec-----CCcCce
Q 023414 111 FKKFSRSEKTSNLLHSLGYK-RPV--DIQSMYIFKQPGIGGEVVPHQDNSFLITEPSTCTGLWLALEDA-----TIINGC 182 (282)
Q Consensus 111 ~~~l~~~p~i~~~~~~llg~-~~~--~~~s~~~~~~p~~~~~~~wH~D~~~~~~~p~~~v~~~i~L~d~-----~~~~G~ 182 (282)
+++.+..+.++++++++.|. +.. .....+..-.+ |.....|.|.. ..+.|++.+||.+- ...+|.
T Consensus 97 Lr~~L~S~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~--G~fL~~H~D~~-----~~RrvS~VLYLN~pd~~W~~e~GGe 169 (633)
T 3kt7_A 97 LRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTK--GCHLLTHDDVI-----GSRRISFILYLPDPDRKWKSHYGGG 169 (633)
T ss_dssp HHHHHTSHHHHHHHHHHHTCCCCCSSCCCEEEEEECT--TCEEEEECCCC-----TTEEEEEEEECSCTTSCCCGGGBCC
T ss_pred HHHHHhcHHHHHHHHHHhCCcccCCCceeEEEEEeCC--CCeeeecCCCC-----CCeEEEEEEEcCCCCCCCCccCCce
Confidence 45566789999999999775 321 11111221122 34467999953 13789999999972 235777
Q ss_pred EEEEcCCCCCCcceeeeeCCCCeeecCCCCCCCCCCeEEeeecCceEEEEeCc---cccCCCCCCCCCCceEEEEEEEeC
Q 023414 183 LWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSLVLIHGD---LIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 183 l~~ipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdvvlf~~~---~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
|++.+..... . + .......+....|.++||... .+|+..+......|+++..+|...
T Consensus 170 L~Lyd~d~~~--~----------------P--~~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~~p 229 (633)
T 3kt7_A 170 LRLFPSILPN--V----------------P--HSDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYHIP 229 (633)
T ss_dssp EEECCEEETT--E----------------E--CSSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEEECC
T ss_pred EEEecCCCcC--C----------------C--CCCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEeccC
Confidence 8887542110 0 0 012245677889999999974 999988776689999999999765
No 15
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=91.91 E-value=4.2 Score=32.82 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=30.2
Q ss_pred CeEEeeecCceEEEEeCcc---c-cCCCCCC-CCCCceEEEEEE
Q 023414 218 DFVPIEVKAGSLVLIHGDL---I-HQSFENQ-SSKSRHAYSLHV 256 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~~---~-H~s~~n~-s~~~R~~~~~~~ 256 (282)
..+.+.++.||++++...+ | |+..... ....|.++++|.
T Consensus 158 ~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR~ 201 (204)
T 3s57_A 158 AVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRK 201 (204)
T ss_dssp CCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEEC
T ss_pred ceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEeee
Confidence 4678999999999999974 3 7765543 347899999874
No 16
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=87.81 E-value=0.96 Score=38.80 Aligned_cols=103 Identities=16% Similarity=0.169 Sum_probs=63.2
Q ss_pred cChhHHHHHHHhCCCCccccccceeeeCCCCCCCCcccCCCCCCcCCCCcceEEeeeeeecCCcCceEEEEcCCCCCCcc
Q 023414 116 RSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEPSTCTGLWLALEDATIINGCLWAIPGSHKNGLV 195 (282)
Q Consensus 116 ~~p~i~~~~~~llg~~~~~~~s~~~~~~p~~~~~~~wH~D~~~~~~~p~~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~ 195 (282)
.-|.|.++++..++.+. +....+..+|| +.+.+|+|...........+.+-|+|.. +.|+..++
T Consensus 74 ~~P~i~~il~~~f~~~~--l~~vRlrL~PG--~~I~~HrD~~~l~~~~~~~~RlHIPL~T---np~~~f~v--------- 137 (290)
T 1e5r_A 74 HVPYLKEIVTTVFDGTH--LQMARSRNLKN--AIVIPHRDFVELDREVDRYFRTFMVLED---SPLAFHSN--------- 137 (290)
T ss_dssp SSCHHHHHHHHHBCSSS--EEEEEEEEEES--EEEEEECCC--------CBCCEEEECSC---CTTEEEEE---------
T ss_pred cChHHHHHHHHhcccch--hheEEEEeCCC--CEeeCccCccccccccCCceEEEeeEec---CCCcEEEE---------
Confidence 34788899977766543 12221233454 5689999983321111234556677743 22222221
Q ss_pred eeeeeCCCCeeecCCCCCCCCCCeEEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEE
Q 023414 196 RRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVV 257 (282)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~ 257 (282)
+-..+.|++|.+.+||....|.+.. .|+..|..+.+=|.
T Consensus 138 ----------------------dg~~~~m~~GE~w~~d~~~~H~v~N-~g~~~RIhLv~D~~ 176 (290)
T 1e5r_A 138 ----------------------EDTVIHMRPGEIWFLDAATVHSAVN-FSEISRQSLCVDFA 176 (290)
T ss_dssp ----------------------TTEEECCCTTEEEECCTTSCEEEEE-SSSSCCCEEEEEEB
T ss_pred ----------------------CCEEEecCCCCEEEEcCCCeeEEEc-CCCCCeEEEEEEec
Confidence 1245789999999999999999875 47889999998883
No 17
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=83.79 E-value=7.1 Score=32.70 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=28.8
Q ss_pred eecCceEEEEeC-ccccCCCCCCC--------CCCceEEEEEEEeC
Q 023414 223 EVKAGSLVLIHG-DLIHQSFENQS--------SKSRHAYSLHVVET 259 (282)
Q Consensus 223 ~~~~Gdvvlf~~-~~~H~s~~n~s--------~~~R~~~~~~~~~~ 259 (282)
..++||+++++- +++|.+++... ...|=++.+.|...
T Consensus 203 l~~p~d~llv~D~~~~H~vTpI~~~~~~~~~~~g~RDvlVvtf~~~ 248 (254)
T 3pl0_A 203 LEQPWTVLLLDDQQVIHESTPLLPLDPADPAVPAHRDTLVLTYRSG 248 (254)
T ss_dssp CCSTTCEEEEETTTEEEEECCEEESCTTCTTSCCEEEEEEEEEESS
T ss_pred ecCCCcEEEEeCCcccCCCCccccCCCCCCCCceEEEEEEEEecCC
Confidence 469999999985 58999998642 25688899998774
No 18
>3qh6_A CT296; iron, modeling; HET: PG4; 1.80A {Chlamydia trachomatis} PDB: 3qh7_A
Probab=82.41 E-value=6.2 Score=29.35 Aligned_cols=42 Identities=14% Similarity=0.399 Sum_probs=36.1
Q ss_pred CCCCHHHHHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHccc
Q 023414 5 GNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGF 46 (282)
Q Consensus 5 ~~lt~~~~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~~ 46 (282)
.+|--|.+..|+.+|-+.++++++.+.+..+..++...+++.
T Consensus 5 ~vLHLeHlR~FqNhGsILFE~l~~~~DC~~Le~~l~~Fv~~v 46 (157)
T 3qh6_A 5 AVLHLEHKRYFQNHGHILFEGLAPVSDCKQLEAELKLFLKEV 46 (157)
T ss_dssp CCCCHHHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHC---
T ss_pred HHhhHHHHHHHhccCceeecccCCHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999999999999999999999888764
No 19
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=81.34 E-value=5.1 Score=33.15 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=33.9
Q ss_pred CCeEEeeecCceEEEEeCcc---c-cCCCCCC-CCCCceEEEEEEEeC
Q 023414 217 NDFVPIEVKAGSLVLIHGDL---I-HQSFENQ-SSKSRHAYSLHVVET 259 (282)
Q Consensus 217 ~~~v~~~~~~Gdvvlf~~~~---~-H~s~~n~-s~~~R~~~~~~~~~~ 259 (282)
...+.+.++.||++++...+ | |+..... ....|.++++|....
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~v~~ 231 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYP 231 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEECCCC
T ss_pred CceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeeeccc
Confidence 35688999999999999874 4 9877642 357899999998654
No 20
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=81.30 E-value=1.8 Score=37.58 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=29.1
Q ss_pred eEEeeecCceEEEEeCc-cccCCCCCCC---CCCceEEEEEEEe
Q 023414 219 FVPIEVKAGSLVLIHGD-LIHQSFENQS---SKSRHAYSLHVVE 258 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~-~~H~s~~n~s---~~~R~~~~~~~~~ 258 (282)
.+...+++||++|||.+ ++|+..+-.. ...|++.-+....
T Consensus 259 ~~~~~w~~GDv~i~DN~~~lH~R~~f~~~~~~~~R~L~R~~v~~ 302 (324)
T 1ds1_A 259 TEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLHRVYIRT 302 (324)
T ss_dssp CEEECCCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEEEEEC
T ss_pred cEEEeeCCCCEEEEeCCceeecCCccCCCCCCCCcEEEEEEEec
Confidence 57789999999999987 7999776543 3467655555433
No 21
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=80.26 E-value=1.9 Score=36.50 Aligned_cols=41 Identities=7% Similarity=0.000 Sum_probs=31.7
Q ss_pred CeEEeeecCceEEEEeCc-cccCCCCCCCCCCceEEEEEEEe
Q 023414 218 DFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVE 258 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~-~~H~s~~n~s~~~R~~~~~~~~~ 258 (282)
-.+....++||++|||.+ ++|+..+-..+..|++.-+....
T Consensus 234 ~~~~~~w~~GDv~i~DN~~~lH~r~~f~~~~~R~l~R~~i~~ 275 (283)
T 1otj_A 234 FQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILG 275 (283)
T ss_dssp GEEEECCCTTCEEEEETTSEEEEECCCCTTSCEEEEEEEEEC
T ss_pred cEEEeeEcCCCEEEEECcceeecccCCCCCCceEEEEEEEec
Confidence 367889999999999987 79998886555667766555544
No 22
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=79.78 E-value=2.2 Score=35.82 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=30.9
Q ss_pred CCeEEeeecCceEEEEeCc-cccCCCCCCC-CCCceEEEEEE
Q 023414 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQS-SKSRHAYSLHV 256 (282)
Q Consensus 217 ~~~v~~~~~~Gdvvlf~~~-~~H~s~~n~s-~~~R~~~~~~~ 256 (282)
.-.+...+++||++|||.+ ++|+..+-.. ...|++.-+..
T Consensus 229 ~~~~~~~w~~GD~~i~DN~~vlH~R~~f~~~~~~R~l~R~~i 270 (273)
T 1nx8_A 229 RYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRLYRGQT 270 (273)
T ss_dssp TTEEEECCCTTCEEEEETTTEEEEECCCCCTTCEEEEEEEEE
T ss_pred ceEEEeEecCCCEEEEECCeeeeccccCCCCCCCeEEEEeec
Confidence 3468899999999999987 7999888654 45676655544
No 23
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=79.76 E-value=1.9 Score=36.93 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=32.7
Q ss_pred CeEEeeecCceEEEEeCc-cccCCCCCCCCCCceEEEEEEEe
Q 023414 218 DFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVE 258 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~-~~H~s~~n~s~~~R~~~~~~~~~ 258 (282)
-.+....++||++|||.+ ++|+......+..|.+.-+....
T Consensus 240 ~~~~~~w~~GDlviwDNr~vlH~r~~~~~~~~R~l~R~~i~g 281 (293)
T 3eat_X 240 AHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHA 281 (293)
T ss_dssp TEEEECCCTTCEEEEETTTEEEEECCBSSCCCEEEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEeCCceEEcccCCCCCCceEEEEEEEcC
Confidence 357788999999999999 69998876656678777666654
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=78.57 E-value=2.1 Score=36.65 Aligned_cols=41 Identities=12% Similarity=0.206 Sum_probs=32.2
Q ss_pred CeEEeeecCceEEEEeCc-cccCCCCCCCCCCceEEEEEEEe
Q 023414 218 DFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVE 258 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~-~~H~s~~n~s~~~R~~~~~~~~~ 258 (282)
-.+....++||++|||.+ ++|+..+-..+..|.+.-+....
T Consensus 243 ~~~~~~w~~GDvvi~DNr~~lH~r~~f~~~~~R~l~R~~i~g 284 (301)
T 1oih_A 243 NTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRVTLAG 284 (301)
T ss_dssp GEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEEEECC
T ss_pred ceEEEEEcCCCEEEEEccceeecccCCCCCCceEEEEEEEeC
Confidence 467889999999999987 79999887655677766666644
No 25
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=75.83 E-value=6.1 Score=31.78 Aligned_cols=39 Identities=13% Similarity=0.300 Sum_probs=33.4
Q ss_pred EeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETD 260 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~~ 260 (282)
....+.|.+++||....|.+- |.++..|..+++-+-..+
T Consensus 147 ~~~w~eGe~~~fDds~~Hev~-N~~d~~RvvL~~D~~rPd 185 (197)
T 3rcq_A 147 TKTWEEGKVLIFDDSFEHEVW-QDASSFRLIFIVDVWHPE 185 (197)
T ss_dssp EECCCBTCEEEECTTSCEEEE-ECSSSCEEEEEEEEECTT
T ss_pred EEEeeCCcEEEEcCCeEEEEE-ECCCCCEEEEEEeeeCCC
Confidence 457889999999999999987 458889999999987763
No 26
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=74.15 E-value=5 Score=34.47 Aligned_cols=40 Identities=10% Similarity=0.200 Sum_probs=30.8
Q ss_pred eEEeeecCceEEEEeCc-cccCCCCCCCCCCceEEEEEEEe
Q 023414 219 FVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVE 258 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~-~~H~s~~n~s~~~R~~~~~~~~~ 258 (282)
.+....++||++|||.+ ++|++...-.+..|.+.-+....
T Consensus 237 ~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R~ti~g 277 (301)
T 3r1j_A 237 TVRWSWAPGDVAMWDNRATQHRAIDDYDDQPRLMHRITLMG 277 (301)
T ss_dssp EEEECCCTTCEEEEETTSEEEEECCCSTTCCCEEEEEEECC
T ss_pred EEEeeeCCCCEEEEEcCceeecccCCCCCCCeEEEEEEEcC
Confidence 56778899999999999 69998765445677766666644
No 27
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=72.76 E-value=3.7 Score=34.78 Aligned_cols=39 Identities=5% Similarity=0.078 Sum_probs=30.2
Q ss_pred eEEeeecCceEEEEeCc-cccCCCCCCCCCCceEEEEEEE
Q 023414 219 FVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVV 257 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~-~~H~s~~n~s~~~R~~~~~~~~ 257 (282)
.+....++||++|||.+ ++|++...-.+..|.+.-+...
T Consensus 233 ~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R~ti~ 272 (277)
T 3pvj_A 233 SIRWRWQENDVAFWDNRVTQHFAVDDYRPNRRVMHRATIL 272 (277)
T ss_dssp EEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEEEEC
T ss_pred EEEEeeCCCCEEEEeCCceeeeccCCCCCCccEEEEEEec
Confidence 56778899999999999 6999887655567776655543
No 28
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=72.50 E-value=36 Score=27.42 Aligned_cols=41 Identities=12% Similarity=0.196 Sum_probs=30.2
Q ss_pred eEEeeecCceEEEEeCcc---ccCCCCCCCC------CCceEEEEEEEeC
Q 023414 219 FVPIEVKAGSLVLIHGDL---IHQSFENQSS------KSRHAYSLHVVET 259 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~~---~H~s~~n~s~------~~R~~~~~~~~~~ 259 (282)
.+.+.++.||++++...+ .|+....... ..|.++++|....
T Consensus 155 ~~~i~L~~GsllvM~G~~r~~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~ 204 (211)
T 3i3q_A 155 LKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGK 204 (211)
T ss_dssp CEEEEECTTCEEEECGGGTTCCEEECCCCCCCBTTTBTCEEEEEEECCSC
T ss_pred eEEEECCCCCEEEECchHHceEeccCcccCCcCCCCCCCEEEEEeeeccC
Confidence 567999999999998753 6776654432 3599999887654
No 29
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=71.88 E-value=4.3 Score=35.64 Aligned_cols=40 Identities=13% Similarity=0.284 Sum_probs=29.0
Q ss_pred eEEeeecCceEEEEeCc-cccCCCCCCC---CCCceEEEEEEEe
Q 023414 219 FVPIEVKAGSLVLIHGD-LIHQSFENQS---SKSRHAYSLHVVE 258 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~-~~H~s~~n~s---~~~R~~~~~~~~~ 258 (282)
.+.+.+++||++|||.+ ++|+..+-.. ...|++.-+....
T Consensus 296 ~~~~~w~pGDv~i~DNr~vlH~R~~f~~~~~~~~R~L~R~~i~~ 339 (358)
T 2wbq_A 296 LYELVLDQGDVAFIDNRRAVHGRRAFQPRYDGRDRWLKRINITR 339 (358)
T ss_dssp CEEEECCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEEEEES
T ss_pred ceEEeecCCCEEEEeCcccccCCCCCCCCCCCCCceEEEEEEec
Confidence 47788999999999998 7999776542 3457655555443
No 30
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=70.40 E-value=4.7 Score=35.47 Aligned_cols=40 Identities=18% Similarity=0.231 Sum_probs=29.7
Q ss_pred eEEeeecCceEEEEeCc-cccCCCCCCC---CCCceEEEEEEEe
Q 023414 219 FVPIEVKAGSLVLIHGD-LIHQSFENQS---SKSRHAYSLHVVE 258 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~-~~H~s~~n~s---~~~R~~~~~~~~~ 258 (282)
.+.+.+++||++|||.+ ++|+..+-.. ...|++.-+....
T Consensus 291 ~~~~~w~pGDivi~DN~~vlH~R~~f~d~~~~~~R~L~R~~i~~ 334 (357)
T 2og5_A 291 AVTHRLLPGELAIVDNRVTVHGRTEFTPRYDGTDRWLQRTFVLT 334 (357)
T ss_dssp CEEECCCTTCEEEEETTTEEEEECCCCCCCSSCSCEEEEEEEES
T ss_pred eEEEeeCCCCEEEEeCCccccCCCCCCCCCCCCCcEEEEEEEcc
Confidence 57788999999999998 7999776542 3467655555543
No 31
>1jr7_A GABT protein, hypothetical 37.4 kDa protein in ILEY-GABD interg region; gamma amino-butyric acid metabolism, GABA; 2.00A {Escherichia coli} SCOP: b.82.2.3 PDB: 2r6s_A*
Probab=68.01 E-value=8.5 Score=33.22 Aligned_cols=43 Identities=14% Similarity=0.164 Sum_probs=32.0
Q ss_pred CCeEEeeecCceEEEEeCc-cccCCCCCCCC-C-CceEE--EEEEEeC
Q 023414 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQSS-K-SRHAY--SLHVVET 259 (282)
Q Consensus 217 ~~~v~~~~~~Gdvvlf~~~-~~H~s~~n~s~-~-~R~~~--~~~~~~~ 259 (282)
...+...+++||+|+||.+ ++||-.+-..+ . .|+.+ -..|...
T Consensus 256 ~~~~~~kL~pGd~vifDN~RvLHGR~aF~~~~g~~R~L~R~~G~Y~~~ 303 (311)
T 1jr7_A 256 KGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYA 303 (311)
T ss_dssp TTCEEECCCTTCEEEEETTTEEEEECCBCCCTTCEEEEEEEEEEECCC
T ss_pred ccEEEEEcCCCcEEEEeCCccccCcCCcCCCCCCceEEecccEEEecC
Confidence 3467889999999999985 89998876532 3 46644 6777665
No 32
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=66.38 E-value=3.4 Score=29.67 Aligned_cols=35 Identities=9% Similarity=0.120 Sum_probs=24.1
Q ss_pred eeecCceEEEEeCccccCCCCCCCCCCceEEEEEE
Q 023414 222 IEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHV 256 (282)
Q Consensus 222 ~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~ 256 (282)
..+++||.+++.+.+.|+......+.....+.+.|
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 68999999999999999964432222343344444
No 33
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=61.66 E-value=42 Score=29.31 Aligned_cols=96 Identities=19% Similarity=0.228 Sum_probs=0.0
Q ss_pred CCCCCCCcccCCCCCCcCCCCcceEEeeeeeecCCcCceEEEEcCCCCCCcceeeeeCCCCeeecCCCCCCCCCCeEEee
Q 023414 144 PGIGGEVVPHQDNSFLITEPSTCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIE 223 (282)
Q Consensus 144 p~~~~~~~wH~D~~~~~~~p~~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 223 (282)
|...-...+|.|... +-|-++| +-|||+|... .+|+.+.
T Consensus 223 ~~~~~g~~~HtD~g~----------lTlL~qd---~v~GLQV~~~----------------------------g~Wi~V~ 261 (356)
T 1gp6_A 223 PELALGVEAHTDVSA----------LTFILHN---MVPGLQLFYE----------------------------GKWVTAK 261 (356)
T ss_dssp TTTCCSEEEECCCSS----------EEEEEEC---SCCCEEEEET----------------------------TEEEECC
T ss_pred cccccCcCCccCCCe----------EEEEEEc---CCCCeEEecC----------------------------CcEEECc
Q ss_pred ecCceEEEEeCc------------cccCCCCCCCCCCceEEEEEEEeCCCc-ccCCCCccccCCCCCCCCCC
Q 023414 224 VKAGSLVLIHGD------------LIHQSFENQSSKSRHAYSLHVVETDGC-RWSQENWIRRKVEPEPLYAS 282 (282)
Q Consensus 224 ~~~Gdvvlf~~~------------~~H~s~~n~s~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 282 (282)
..+|.+|+.-+. ++||+..|. ...|+++.+-+.+..+. ...+-.-+..+ +-++.|..
T Consensus 262 p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~-~~~R~Sia~F~~P~~d~~~i~pl~~~~~~-~~p~~y~~ 331 (356)
T 1gp6_A 262 CVPDSIVMHIGDTLEILSNGKYKSILHRGLVNK-EKVRISWAVFCEPPKDKIVLKPLPEMVSV-ESPAKFPP 331 (356)
T ss_dssp CCTTCEEEEECHHHHHHTTTSSCCCCEEECCCS-SCCEEEEEEEEECCTTTCEECCCGGGCCS-SSCCSSCC
T ss_pred CCCCeEEEEeccHHHHhcCCEeeccCceecCCC-CCCEEEEEEeecCCCCCcEEeCChhhcCC-CCCccCCC
No 34
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=61.35 E-value=8.6 Score=34.21 Aligned_cols=41 Identities=15% Similarity=0.197 Sum_probs=29.5
Q ss_pred CeEEeeecCceEEEEeCc-cccCCCCCCCC--CCceEEEEEEEeC
Q 023414 218 DFVPIEVKAGSLVLIHGD-LIHQSFENQSS--KSRHAYSLHVVET 259 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~-~~H~s~~n~s~--~~R~~~~~~~~~~ 259 (282)
-.+...+++||++|||.+ ++|+...-... ..|+ +.-.|...
T Consensus 327 ~~~~~~~~pGd~vi~DNr~~lH~R~~f~~~~~~~R~-L~r~yi~~ 370 (388)
T 3o2g_A 327 SKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISRH-LEGAYADW 370 (388)
T ss_dssp TCEEECCCTTCEEEEETTTEEEEECCCCCCSSCSCE-EEEEEECH
T ss_pred hEEEEEcCCCcEEEEeCcEEeeCCCCcCCCCCCCEE-EEEEEEcc
Confidence 357889999999999997 79998876532 3565 44444443
No 35
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=59.56 E-value=44 Score=28.67 Aligned_cols=92 Identities=15% Similarity=0.185 Sum_probs=0.0
Q ss_pred CcccCCCCCCcCCCCcceEEeeeeeecCCcCceEEEEcCCCCCCcceeeeeCCCCeeecCCCCCCCCCCeEEeeecCceE
Q 023414 150 VVPHQDNSFLITEPSTCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSL 229 (282)
Q Consensus 150 ~~wH~D~~~~~~~p~~~v~~~i~L~d~~~~~G~l~~ipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdv 229 (282)
...|.|... +-|-++| .+-|||+|... .+|+.++..+|.+
T Consensus 174 ~~~HtD~g~----------lTlL~qd--~~v~GLQV~~~----------------------------g~Wi~V~p~pgal 213 (319)
T 1w9y_A 174 LRAHTDAGG----------IILLFQD--DKVSGLQLLKD----------------------------GQWIDVPPMRHSI 213 (319)
T ss_dssp CCCBCCSSS----------EEEEEES--SSCCCEEEEET----------------------------TEEEECCCCTTCE
T ss_pred cccccCCCc----------eEEEEec--CCCCeeeEeeC----------------------------CeEEEcccCCCcE
Q ss_pred EEEeCc------------cccCCCCCCCCCCceEEEEEEEeCCCcccCCCCccccCC--CCCCCCCC
Q 023414 230 VLIHGD------------LIHQSFENQSSKSRHAYSLHVVETDGCRWSQENWIRRKV--EPEPLYAS 282 (282)
Q Consensus 230 vlf~~~------------~~H~s~~n~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 282 (282)
|+.-+. ++||+..| +...|+++.+-+.+..+....+-.-+..+. +-++.|..
T Consensus 214 vVNiGD~l~~~SnG~~kS~~HRVv~~-~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~ 279 (319)
T 1w9y_A 214 VVNLGDQLEVITNGKYKSVMHRVIAQ-KDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPK 279 (319)
T ss_dssp EEEECHHHHHHTTTSSCCCCEEECCC-SSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCC
T ss_pred EEEhHHHHHHHhCCeeecccceecCC-CCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCc
No 36
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=58.11 E-value=9.3 Score=28.06 Aligned_cols=23 Identities=17% Similarity=0.247 Sum_probs=19.8
Q ss_pred EEeeecCceEEEEeCccccCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
....+++||++++.+...|+...
T Consensus 96 ~~~~l~~Gd~i~i~~~~~H~~~n 118 (133)
T 1o4t_A 96 KDVPIKAGDVCFTDSGESHSIEN 118 (133)
T ss_dssp EEEEEETTEEEEECTTCEEEEEC
T ss_pred EEEEeCCCcEEEECCCCcEEeEE
Confidence 35789999999999999998654
No 37
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=57.69 E-value=1.5 Score=31.19 Aligned_cols=22 Identities=18% Similarity=0.095 Sum_probs=19.1
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+...|+-..
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~n 90 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWKV 90 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEe
Confidence 4689999999999999998543
No 38
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=56.81 E-value=11 Score=26.22 Aligned_cols=22 Identities=27% Similarity=0.354 Sum_probs=19.5
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+...|+...
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~ 84 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRN 84 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEc
Confidence 4689999999999999999654
No 39
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=55.51 E-value=10 Score=25.74 Aligned_cols=22 Identities=9% Similarity=0.007 Sum_probs=19.5
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+...|+...
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~ 89 (105)
T 1v70_A 68 EALLAPGMAAFAPAGAPHGVRN 89 (105)
T ss_dssp EEEECTTCEEEECTTSCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEe
Confidence 5789999999999999998754
No 40
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=53.69 E-value=5.6 Score=34.39 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=21.5
Q ss_pred eEEeeecCceEEEEeCc-cccCCCCC
Q 023414 219 FVPIEVKAGSLVLIHGD-LIHQSFEN 243 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~-~~H~s~~n 243 (282)
.+....++||++|||.+ ++|+..+-
T Consensus 293 ~~~~~w~~GDv~i~DN~~~lH~R~~f 318 (330)
T 2q4a_A 293 CVAVPWQRGDVLLIDNWAVLHSRRPF 318 (330)
T ss_dssp CBCCCCCTTCEEEEETTTEEEEECCE
T ss_pred EeecCCCCCCEEEEecccccccCCCC
Confidence 46678899999999987 79998875
No 41
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=52.89 E-value=13 Score=26.74 Aligned_cols=38 Identities=24% Similarity=0.167 Sum_probs=26.1
Q ss_pred EeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
...+++||++++.+..+|+... .++.+-..+.+.+.+.
T Consensus 67 ~~~l~~Gd~i~i~~~~~H~~~~-~~~~~~~~~~i~~~~~ 104 (125)
T 3cew_A 67 KIELQAGDWLRIAPDGKRQISA-ASDSPIGFLCIQVKAG 104 (125)
T ss_dssp EEEEETTEEEEECTTCCEEEEE-BTTBCEEEEEEEEETT
T ss_pred EEEeCCCCEEEECCCCcEEEEc-CCCCCEEEEEEEcCCc
Confidence 4689999999999999998653 3333333445555443
No 42
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=52.78 E-value=13 Score=27.19 Aligned_cols=24 Identities=21% Similarity=0.162 Sum_probs=20.3
Q ss_pred EEeeecCceEEEEeCccccCCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
....+++||++++.+.+.|+....
T Consensus 79 ~~~~l~~Gd~~~ip~~~~H~~~~~ 102 (145)
T 3ht1_A 79 RTEEVGPGEAIFIPRGEPHGFVTG 102 (145)
T ss_dssp EEEEECTTCEEEECTTCCBEEECC
T ss_pred EEEEECCCCEEEECCCCeEEeEcC
Confidence 357899999999999999986543
No 43
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=52.40 E-value=9.2 Score=27.43 Aligned_cols=22 Identities=18% Similarity=0.404 Sum_probs=19.2
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+..+|+...
T Consensus 80 ~~~l~~Gd~~~i~~~~~H~~~n 101 (125)
T 3h8u_A 80 VTHLKAGDIAIAKPGQVHGAMN 101 (125)
T ss_dssp EEEEETTEEEEECTTCCCEEEE
T ss_pred EEEeCCCCEEEECCCCEEEeEe
Confidence 4689999999999999998653
No 44
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=51.81 E-value=11 Score=29.78 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=21.6
Q ss_pred CeEEeeecCceEEEEeCccccCCCC
Q 023414 218 DFVPIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
+.+...+++||++++.+...|+...
T Consensus 117 ~~~~~~l~~GD~v~ip~g~~H~~~N 141 (190)
T 1x82_A 117 DAKWISMEPGTVVYVPPYWAHRTVN 141 (190)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEE
T ss_pred cEEEEEECCCcEEEECCCCeEEEEE
Confidence 4567899999999999999999654
No 45
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=51.75 E-value=8.8 Score=27.65 Aligned_cols=37 Identities=24% Similarity=0.366 Sum_probs=25.8
Q ss_pred EeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEe
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVE 258 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~ 258 (282)
...+++||++++.+..+|+.... ++.+=..+.+.|.+
T Consensus 73 ~~~l~~Gd~~~i~~~~~H~~~~~-~~~~~~~~~i~f~~ 109 (128)
T 4i4a_A 73 DFPVTKGDLIIIPLDSEHHVINN-NQEDFHFYTIWWDK 109 (128)
T ss_dssp EEEEETTCEEEECTTCCEEEEEC-SSSCEEEEEEEECH
T ss_pred EEEECCCcEEEECCCCcEEeEeC-CCCCEEEEEEEECH
Confidence 57899999999999999986543 33333335555544
No 46
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=49.88 E-value=13 Score=25.35 Aligned_cols=27 Identities=15% Similarity=0.137 Sum_probs=21.7
Q ss_pred EEeeecCceEEEEeCccccCCCCCCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFENQSSK 247 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n~s~~ 247 (282)
....+++||++.+.....|+... .++.
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~~~N-~g~~ 85 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHNVIN-PSDT 85 (97)
T ss_dssp EEEEECTTCCEEECTTCEEEEEC-CSSS
T ss_pred EEEEEcCCCEEEeCCCCcccCEe-CCCC
Confidence 45789999999999999999744 4443
No 47
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=48.66 E-value=17 Score=27.53 Aligned_cols=25 Identities=16% Similarity=0.019 Sum_probs=21.1
Q ss_pred eEEeeecCceEEEEeCccccCCCCC
Q 023414 219 FVPIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
.....+++||++++.+.+.|+....
T Consensus 87 ~~~~~l~~Gd~i~ip~~~~H~~~n~ 111 (163)
T 1lr5_A 87 PQEIPFFQNTTFSIPVNDPHQVWNS 111 (163)
T ss_dssp CEEEEECTTEEEEECTTCCEEEECC
T ss_pred cEEEEeCCCCEEEECCCCcEEeEeC
Confidence 3567999999999999999986543
No 48
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=47.87 E-value=13 Score=26.85 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=19.8
Q ss_pred EeeecCceEEEEeCccccCCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
...+++||++++.+...|+....
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~~~~~ 109 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHGFRND 109 (126)
T ss_dssp EEEEETTEEEEECTTCCEEEECC
T ss_pred EEEECCCCEEEECCCCcEEeEeC
Confidence 46899999999999999997543
No 49
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=47.86 E-value=11 Score=28.22 Aligned_cols=23 Identities=22% Similarity=0.125 Sum_probs=20.0
Q ss_pred EEeeecCceEEEEeCccccCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
....+++||++++.+.+.|+...
T Consensus 88 ~~~~l~~Gd~i~ip~g~~H~~~n 110 (148)
T 2oa2_A 88 FQEEVFDDYAILIPAGTWHNVRN 110 (148)
T ss_dssp EEEEEETTCEEEECTTCEEEEEE
T ss_pred eeEEECCCCEEEECCCCcEEEEE
Confidence 45789999999999999998654
No 50
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=45.51 E-value=14 Score=28.98 Aligned_cols=23 Identities=9% Similarity=0.122 Sum_probs=20.0
Q ss_pred EEeeecCceEEEEeCccccCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
....+++||.+++++...|+...
T Consensus 162 ~~~~l~~GD~~~~~~~~~H~~~n 184 (198)
T 2bnm_A 162 KEALLPTGASMFVEEHVPHAFTA 184 (198)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred ccEEECCCCEEEeCCCCceEEEe
Confidence 56799999999999999998653
No 51
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=45.28 E-value=12 Score=26.40 Aligned_cols=22 Identities=14% Similarity=0.279 Sum_probs=19.4
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+...|+...
T Consensus 77 ~~~l~~Gd~i~i~~~~~H~~~~ 98 (114)
T 2ozj_A 77 KIDLVPEDVLMVPAHKIHAIAG 98 (114)
T ss_dssp EEEECTTCEEEECTTCCBEEEE
T ss_pred EEEecCCCEEEECCCCcEEEEe
Confidence 5689999999999999998654
No 52
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=45.22 E-value=9.8 Score=26.95 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=18.1
Q ss_pred eecCceEEEEeCccccCCCC
Q 023414 223 EVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 223 ~~~~Gdvvlf~~~~~H~s~~ 242 (282)
.+++||++++.+...|+...
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~ 88 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQN 88 (117)
T ss_dssp EEETTCEEEECTTCEEEEEC
T ss_pred EeCCCCEEEECCCCcEEeEc
Confidence 78999999999999998654
No 53
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=45.06 E-value=16 Score=27.15 Aligned_cols=40 Identities=10% Similarity=0.069 Sum_probs=26.3
Q ss_pred EEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
....+++||+++.++..+|+........+-..+.+.|.+.
T Consensus 56 ~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~~~ 95 (164)
T 2arc_A 56 REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPR 95 (164)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEECCC
T ss_pred EEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEECCh
Confidence 3568999999999999999854322112223355666553
No 54
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=44.28 E-value=13 Score=28.37 Aligned_cols=22 Identities=32% Similarity=0.237 Sum_probs=19.4
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+..+|+...
T Consensus 83 ~~~l~~Gd~i~ip~~~~H~~~n 104 (156)
T 3kgz_A 83 ISDVAQGDLVFIPPMTWHQFRA 104 (156)
T ss_dssp EEEEETTCEEEECTTCCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEe
Confidence 5689999999999999998654
No 55
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=42.57 E-value=16 Score=28.55 Aligned_cols=29 Identities=17% Similarity=0.096 Sum_probs=22.1
Q ss_pred EEeeecCceEEEEeCccccCCCCCCCCCCc
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSR 249 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R 249 (282)
....+++||++++++.+.|+.... ++.+-
T Consensus 144 ~~~~l~~GD~i~i~~~~~H~~~n~-~~~~~ 172 (192)
T 1y9q_A 144 QWHELQQGEHIRFFSDQPHGYAAV-TEKAV 172 (192)
T ss_dssp EEEEECTTCEEEEECSSSEEEEES-SSCEE
T ss_pred EEEEeCCCCEEEEcCCCCeEeECC-CCCcE
Confidence 356899999999999999986543 44433
No 56
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=41.91 E-value=14 Score=25.63 Aligned_cols=22 Identities=9% Similarity=0.401 Sum_probs=19.6
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+.+.|+...
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~ 89 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRS 89 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEe
Confidence 5689999999999999998665
No 57
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=41.50 E-value=17 Score=28.06 Aligned_cols=22 Identities=32% Similarity=0.084 Sum_probs=19.5
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+.++|+...
T Consensus 92 ~~~l~~GD~i~ip~g~~H~~~n 113 (166)
T 3jzv_A 92 VSAVAPYDLVTIPGWSWHQFRA 113 (166)
T ss_dssp EEEECTTCEEEECTTCCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEe
Confidence 5789999999999999998653
No 58
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=40.73 E-value=22 Score=26.85 Aligned_cols=22 Identities=14% Similarity=0.131 Sum_probs=19.0
Q ss_pred EeeecCceEEEEeCc-cccCCCC
Q 023414 221 PIEVKAGSLVLIHGD-LIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~-~~H~s~~ 242 (282)
...+++||++++.+. ..|+...
T Consensus 87 ~~~l~~Gd~i~i~~~~~~H~~~n 109 (162)
T 3l2h_A 87 QYPIAPGDFVGFPCHAAAHSISN 109 (162)
T ss_dssp EEEECTTCEEEECTTSCCEEEEC
T ss_pred EEEeCCCCEEEECCCCceEEeEe
Confidence 468999999999998 9998644
No 59
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=40.60 E-value=23 Score=27.03 Aligned_cols=23 Identities=13% Similarity=0.027 Sum_probs=19.8
Q ss_pred EeeecCceEEEEeCc--cccCCCCC
Q 023414 221 PIEVKAGSLVLIHGD--LIHQSFEN 243 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~--~~H~s~~n 243 (282)
...+++||++++... +.|+....
T Consensus 84 ~~~l~~GD~i~ip~~~~~~H~~~n~ 108 (163)
T 3i7d_A 84 EHPMVPGDCAAFPAGDPNGHQFVNR 108 (163)
T ss_dssp EEEECTTCEEEECTTCCCCBEEECC
T ss_pred EEEeCCCCEEEECCCCCcceEEEEC
Confidence 578999999999999 99986543
No 60
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=40.53 E-value=42 Score=26.25 Aligned_cols=39 Identities=8% Similarity=0.121 Sum_probs=27.5
Q ss_pred CeEEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 023414 218 DFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
.+..+.+++||+++....+.|+-... +..+ ...+++...
T Consensus 120 ~~~~~~l~~GDli~IP~g~~H~~~~~--~~~~-~~~ir~F~~ 158 (179)
T 1zrr_A 120 EVFQVLCEKNDLISVPAHTPHWFDMG--SEPN-FTAIRIFDN 158 (179)
T ss_dssp CEEEEECCCSCEEEECTTCCBCCCCS--SCSS-CEEEEEECC
T ss_pred EEEEEEECCCCEEEECCCCeEeeecC--CCce-EEEEEeccC
Confidence 45678899999999999999996542 2234 445555543
No 61
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=39.67 E-value=1.1e+02 Score=26.23 Aligned_cols=31 Identities=3% Similarity=0.058 Sum_probs=22.3
Q ss_pred HHHHHHhhhCcEEEEcC-CCCHHHHHHHHHHHHHH
Q 023414 9 SDNLNFFNSQGYVVLES-FASDEEIEAMRKQMDHL 42 (282)
Q Consensus 9 ~~~~~~f~~~Gyvvi~~-~~~~~~v~~l~~~~~~~ 42 (282)
++..+++++.||+.|.| =+ .++++.+...+.
T Consensus 30 ~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F 61 (331)
T 1odm_A 30 QQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEF 61 (331)
T ss_dssp HHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEccce---eHHHHHHHHHhc
Confidence 45678889999999886 22 666666666666
No 62
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=39.52 E-value=16 Score=24.83 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=19.3
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+...|+...
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~ 90 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMA 90 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEc
Confidence 4688999999999999998654
No 63
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=38.86 E-value=39 Score=26.86 Aligned_cols=45 Identities=11% Similarity=0.323 Sum_probs=31.0
Q ss_pred CeEEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeCCCcccCC
Q 023414 218 DFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETDGCRWSQ 266 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~~~~~~~~ 266 (282)
.+..+.+++||+|+....+.|+-... +. .....+++... ...|.+
T Consensus 125 ~~~~i~v~~GDlIiIPaG~~H~f~~~--~~-~~~~airlF~~-~~~W~~ 169 (191)
T 1vr3_A 125 KWIRISMEKGDMITLPAGIYHRFTLD--EK-NYVKAMRLFVG-EPVWTP 169 (191)
T ss_dssp CEEEEEEETTEEEEECTTCCEEEEEC--TT-CCEEEEEEESS-SCCCCC
T ss_pred eEEEEEECCCCEEEECcCCcCCcccC--CC-CCEEEEEEECC-CCCccC
Confidence 35578999999999999999986532 22 34556666665 244554
No 64
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=38.74 E-value=19 Score=20.69 Aligned_cols=21 Identities=29% Similarity=0.464 Sum_probs=16.4
Q ss_pred CCCCCCHHHHHHhhhCcEEEE
Q 023414 3 LAGNLNSDNLNFFNSQGYVVL 23 (282)
Q Consensus 3 ~~~~lt~~~~~~f~~~Gyvvi 23 (282)
+...||+|+++..==.||-|+
T Consensus 19 RNrpltDEeLD~mLP~GYkIl 39 (39)
T 3lqv_P 19 RNRPLSDEELDAMFPEGYKVL 39 (39)
T ss_dssp TTCCCCHHHHHHTCCSSEEEC
T ss_pred hcCCCCHHHHHHhCCCCcccC
Confidence 567789999888776788774
No 65
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=37.26 E-value=19 Score=24.75 Aligned_cols=22 Identities=14% Similarity=0.073 Sum_probs=19.2
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+...|+...
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~~~~ 96 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHGVRA 96 (110)
T ss_dssp EEEECTTEEEEEETTSCEEEEE
T ss_pred EEEECCCCEEEeCCCCcEEEEE
Confidence 4689999999999999998554
No 66
>2fho_A Spliceosomal protein SF3B155; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.74 E-value=23 Score=21.31 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=18.1
Q ss_pred CCCCCCHHHHHHhhhCcEEEEc
Q 023414 3 LAGNLNSDNLNFFNSQGYVVLE 24 (282)
Q Consensus 3 ~~~~lt~~~~~~f~~~Gyvvi~ 24 (282)
+...||+|+++..==.||.|++
T Consensus 18 rnrpltDEeLD~~LP~GY~il~ 39 (47)
T 2fho_A 18 RNRPLSDEELDAMFPEGYKVLP 39 (47)
T ss_dssp CCCCSCTTHHHHHSCTTEEECC
T ss_pred ccCCCCHHHHHHhCCCCCeecC
Confidence 4567999999887778999986
No 67
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=35.48 E-value=12 Score=28.06 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=18.7
Q ss_pred eeecCceEEEEeCccccCCCC
Q 023414 222 IEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 222 ~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
..+++||++++.+...|+...
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n 109 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGA 109 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEE
T ss_pred EEECCCCEEEECCCCcEEeEe
Confidence 589999999999999998654
No 68
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=34.87 E-value=36 Score=24.10 Aligned_cols=23 Identities=17% Similarity=0.196 Sum_probs=20.0
Q ss_pred EeeecCceEEEEeCccccCCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
...+++||++++.+.+.|+....
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~~~ 102 (126)
T 4e2g_A 80 TRVLRPGMAYTIPGGVRHRARTF 102 (126)
T ss_dssp EEEECTTEEEEECTTCCEEEECC
T ss_pred EEEeCCCCEEEECCCCcEEeEEC
Confidence 47899999999999999997643
No 69
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=34.01 E-value=22 Score=27.32 Aligned_cols=22 Identities=18% Similarity=0.018 Sum_probs=19.5
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+.++|+...
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~n 116 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIHA 116 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEe
Confidence 5789999999999999998654
No 70
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=32.41 E-value=23 Score=24.68 Aligned_cols=22 Identities=14% Similarity=0.105 Sum_probs=19.5
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+...|+...
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~ 94 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVC 94 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred EEEeCCCCEEEECcCCceeeEe
Confidence 5789999999999999998654
No 71
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=32.38 E-value=41 Score=27.62 Aligned_cols=37 Identities=14% Similarity=0.194 Sum_probs=26.6
Q ss_pred eEEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEE
Q 023414 219 FVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHV 256 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~ 256 (282)
.....+++||++++...+.|+-. |.++.+.+.+.+.+
T Consensus 101 ~~~~~l~~GD~i~iP~g~~H~~~-N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 101 LYSIQSEPKQLIYSPNHYMHGFV-NPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEEECCTTEEEEECTTEEEEEE-CCSSSCEEEEEEEE
T ss_pred eeEEEECCCCEEEECCCCCEEEE-eCCCCCEEEEEEEE
Confidence 34679999999999999999955 45555544323444
No 72
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=31.83 E-value=25 Score=24.85 Aligned_cols=22 Identities=14% Similarity=0.240 Sum_probs=19.6
Q ss_pred EeeecCceEEEEeCccccCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
...+++||++++.+...|+...
T Consensus 75 ~~~l~~Gd~i~ip~~~~H~~~~ 96 (114)
T 3fjs_A 75 QRRLHQGDLLYLGAGAAHDVNA 96 (114)
T ss_dssp EEEECTTEEEEECTTCCEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEe
Confidence 5789999999999999998754
No 73
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=31.45 E-value=38 Score=26.38 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=24.3
Q ss_pred EeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
...+++||++ +...+.|+-. |.++.+=+ +.+.+.++
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~-N~g~~~ar-~l~V~~P~ 154 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWR-NTTDKPCR-IAFILIEA 154 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEE-CCSSSCEE-EEEEEEEC
T ss_pred EEEECCCCEE-EeCCCcEEEE-eCCCCCEE-EEEEEcCC
Confidence 4689999999 9999999864 55554333 23334454
No 74
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=31.42 E-value=21 Score=28.54 Aligned_cols=26 Identities=15% Similarity=0.238 Sum_probs=22.4
Q ss_pred CCeEEeeecCceEEEEeCccccCCCC
Q 023414 217 NDFVPIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 217 ~~~v~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
.....++++|||+|+.=+.-||.+..
T Consensus 198 ~~~~~~~l~pGD~LyiP~gW~H~V~~ 223 (235)
T 4gjz_A 198 APFLSCILSPGEILFIPVKYWHYVRA 223 (235)
T ss_dssp CCCEEEEECTTCEEEECTTCEEEEEE
T ss_pred CCcEEEEECCCCEEEeCCCCcEEEEE
Confidence 35678899999999999999998754
No 75
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=30.80 E-value=21 Score=25.87 Aligned_cols=23 Identities=13% Similarity=0.226 Sum_probs=20.0
Q ss_pred EEeeecCceEEEEeCccccCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
....+++||++++...+.|+...
T Consensus 83 ~~~~l~~Gd~~~ip~g~~H~~~~ 105 (134)
T 2o8q_A 83 GAVMLEAGGSAFQPPGVRHRELR 105 (134)
T ss_dssp EEEEEETTCEEECCTTCCEEEEE
T ss_pred EEEEecCCCEEEECCCCcEEeEe
Confidence 35789999999999999998654
No 76
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=30.57 E-value=19 Score=26.93 Aligned_cols=13 Identities=31% Similarity=0.636 Sum_probs=10.6
Q ss_pred eeecCceEEEEeC
Q 023414 222 IEVKAGSLVLIHG 234 (282)
Q Consensus 222 ~~~~~Gdvvlf~~ 234 (282)
-.++|||+|||..
T Consensus 66 ~~l~pGDLvFf~~ 78 (135)
T 2k1g_A 66 SNLRTGDLVLFRA 78 (135)
T ss_dssp GGCCTTEEEEEEE
T ss_pred HHccCCcEEEECC
Confidence 3689999999954
No 77
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=30.15 E-value=29 Score=27.42 Aligned_cols=24 Identities=29% Similarity=0.458 Sum_probs=20.6
Q ss_pred eEEeeecCceEEEEeCccccCCCC
Q 023414 219 FVPIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 219 ~v~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
.....+++||++++...++|....
T Consensus 118 ~~~~~l~~GD~~~iP~g~~H~~~N 141 (201)
T 1fi2_A 118 LYSRVVRAGETFVIPRGLMHFQFN 141 (201)
T ss_dssp EEEEEEETTCEEEECTTCCEEEEE
T ss_pred EEEEEECCCCEEEECCCCeEEEEe
Confidence 447799999999999999999643
No 78
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=29.82 E-value=28 Score=28.99 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=28.4
Q ss_pred EeeecCceEEEEeCccccCCCCCCCCCCceEEEE-EEEeC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSL-HVVET 259 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~-~~~~~ 259 (282)
...+++||.+.|.+...|+-....+...|..++. +|.+.
T Consensus 103 ~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~~~y~~~ 142 (274)
T 1sef_A 103 THELEAGGYAYFTPEMKMYLANAQEADTEVFLYKKRYQPL 142 (274)
T ss_dssp EEEEETTEEEEECTTSCCEEEESSSSCEEEEEEEEECCCC
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEeeeeeC
Confidence 4689999999999999999765434455665555 45443
No 79
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=29.72 E-value=22 Score=29.20 Aligned_cols=24 Identities=13% Similarity=-0.025 Sum_probs=20.0
Q ss_pred EEeeecCceEEEEeCccccCCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
...++++||++++.+...|+-...
T Consensus 204 ~~~~l~~GD~~~~~~~~pH~~~n~ 227 (246)
T 1sfn_A 204 NYYPVTAGDIIWMGAHCPQWYGAL 227 (246)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEE
T ss_pred EEEEcCCCCEEEECCCCCEEEEcC
Confidence 345899999999999999986543
No 80
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=29.41 E-value=28 Score=24.19 Aligned_cols=23 Identities=13% Similarity=0.320 Sum_probs=19.7
Q ss_pred EeeecCceEEEEeCccccCCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
...+++||++++.+...|+....
T Consensus 79 ~~~l~~Gd~~~ip~~~~H~~~~~ 101 (115)
T 1yhf_A 79 TYRVAEGQTIVMPAGIPHALYAV 101 (115)
T ss_dssp EEEEETTCEEEECTTSCEEEEES
T ss_pred EEEECCCCEEEECCCCCEEEEEC
Confidence 46899999999999999986543
No 81
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=29.30 E-value=21 Score=29.80 Aligned_cols=24 Identities=8% Similarity=0.175 Sum_probs=20.3
Q ss_pred EEeeecCceEEEEeCccccCCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
....+++||++++.+.+.|+-...
T Consensus 221 ~~~~l~~GD~i~i~~~~~H~~~n~ 244 (274)
T 1sef_A 221 EWYPVEKGDYIFMSAYVPQAAYAV 244 (274)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEE
T ss_pred EEEEECCCCEEEECCCCCEEEEeC
Confidence 357899999999999999986543
No 82
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=26.83 E-value=23 Score=29.80 Aligned_cols=30 Identities=17% Similarity=0.074 Sum_probs=22.5
Q ss_pred EeeecCceEEEEeCccccCCCCCCCCCCce
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRH 250 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~ 250 (282)
..++++||++++.+...|+-...-.+.-|+
T Consensus 226 ~~~V~~GD~i~~~~~~~h~~~n~G~e~~~y 255 (266)
T 4e2q_A 226 WYPVQAGDVIWMAPFVPQWYAALGKTRSRY 255 (266)
T ss_dssp EEEEETTCEEEECTTCCEEEEEESSSCEEE
T ss_pred EEEecCCCEEEECCCCcEEEEeCCCCCEEE
Confidence 468999999999999999976543333343
No 83
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=26.43 E-value=40 Score=27.47 Aligned_cols=38 Identities=13% Similarity=0.122 Sum_probs=25.5
Q ss_pred EEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
....+++||++++.+...|+.........| +..-|.+.
T Consensus 184 ~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~--~l~v~~p~ 221 (243)
T 3h7j_A 184 CTVEMKFGTAYFCEPREDHGAINRSEKESK--SINIFFPP 221 (243)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECSSSCEE--EEEEEESC
T ss_pred EEEEECCCCEEEECCCCcEEeEeCCCCCEE--EEEEEcCC
Confidence 356899999999999999987543222333 33444454
No 84
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=26.43 E-value=89 Score=17.81 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=21.1
Q ss_pred HHHHhhhCcEEEEcCCCCHHHHHHHHHHHHHHHcc
Q 023414 11 NLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDG 45 (282)
Q Consensus 11 ~~~~f~~~Gyvvi~~~~~~~~v~~l~~~~~~~~~~ 45 (282)
++..+...| |+++++.++..++..+-.+
T Consensus 8 elqalkkeg-------fspeelaaleselqalekk 35 (48)
T 1g6u_A 8 ELQALKKEG-------FSPEELAALESELQALEKK 35 (48)
T ss_dssp HHHHHHHTT-------CSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcC-------CCHHHHHHHHHHHHHHHHH
Confidence 456667777 5899999999988876443
No 85
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=25.59 E-value=22 Score=28.90 Aligned_cols=11 Identities=36% Similarity=0.619 Sum_probs=9.7
Q ss_pred eecCceEEEEe
Q 023414 223 EVKAGSLVLIH 233 (282)
Q Consensus 223 ~~~~Gdvvlf~ 233 (282)
.+++||+|||.
T Consensus 158 ~lqpGDLVff~ 168 (214)
T 3pbi_A 158 EAKRGDLIFYG 168 (214)
T ss_dssp GCCTTCEEEES
T ss_pred hCCCCCEEEec
Confidence 68999999994
No 86
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=25.29 E-value=53 Score=27.50 Aligned_cols=34 Identities=9% Similarity=0.081 Sum_probs=25.1
Q ss_pred EeeecCceEEEEeCccccCCCCCCCCCCceEEEE
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSL 254 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~ 254 (282)
...+++||.+++.+...|+-....+...|+..+.
T Consensus 109 ~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~ 142 (278)
T 1sq4_A 109 VHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIR 142 (278)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEECCCCCEEEEEEE
Confidence 4689999999999999999765433445554443
No 87
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=24.46 E-value=30 Score=28.55 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=0.0
Q ss_pred EeeecCceEEEEeCccccCCCCCCC-CCCceEEE
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFENQS-SKSRHAYS 253 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n~s-~~~R~~~~ 253 (282)
...+++||++++.+...|+-..... ..-|+.++
T Consensus 219 ~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~ 252 (261)
T 1rc6_A 219 WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYS 252 (261)
T ss_dssp EEEEETTCEEEECSSEEEEEEEC----CEEEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEE
No 88
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=24.07 E-value=39 Score=24.85 Aligned_cols=22 Identities=18% Similarity=0.089 Sum_probs=19.0
Q ss_pred EEeeecCceEEEEeCccccCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSF 241 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~ 241 (282)
....+++||+++|.....|.-.
T Consensus 93 ~~~~l~~GD~i~~p~g~~h~~~ 114 (133)
T 2pyt_A 93 ETMIAKAGDVMFIPKGSSIEFG 114 (133)
T ss_dssp EEEEEETTCEEEECTTCEEEEE
T ss_pred EEEEECCCcEEEECCCCEEEEE
Confidence 3468999999999999998865
No 89
>2kz3_A Putative uncharacterized protein RAD51L3; RAD51D, homologous recombination, unknown function; NMR {Homo sapiens}
Probab=23.51 E-value=15 Score=24.97 Aligned_cols=29 Identities=14% Similarity=0.239 Sum_probs=25.6
Q ss_pred CCCCCCHHHHHHhhhCcEEEEcCCCCHHH
Q 023414 3 LAGNLNSDNLNFFNSQGYVVLESFASDEE 31 (282)
Q Consensus 3 ~~~~lt~~~~~~f~~~Gyvvi~~~~~~~~ 31 (282)
....||++.++.|+++|..-+.+|++.+.
T Consensus 8 ~~p~Lse~~~~~L~~~~I~Tv~Dfl~~d~ 36 (83)
T 2kz3_A 8 LCPGLTEEMIQLLRSHRIKTVVDLVSADL 36 (83)
T ss_dssp SSTTCCHHHHHHHHHTTCCCHHHHTTSCH
T ss_pred cCCCCCHHHHHHHHHCCCCCHHHHHhCCH
Confidence 34689999999999999999999988773
No 90
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=22.97 E-value=40 Score=24.45 Aligned_cols=23 Identities=17% Similarity=0.105 Sum_probs=19.6
Q ss_pred EeeecCceEEEEeCccccCCCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
...+++||++++.....|+-...
T Consensus 88 ~~~l~~GD~~~ip~g~~h~~~~~ 110 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGYTGRWEVD 110 (123)
T ss_dssp EEEEETTCEEEECTTCCCEEEEE
T ss_pred EEEECCCCEEEECCCCeEEEEEC
Confidence 57899999999999999886653
No 91
>3ne0_A Resuscitation promoting factor interacting protei; cell WALL, peptidoglycan, hydrolase; 1.00A {Mycobacterium tuberculosis} PDB: 3pbc_A 3s0q_A 2xiv_A*
Probab=22.79 E-value=37 Score=27.47 Aligned_cols=12 Identities=8% Similarity=0.432 Sum_probs=10.1
Q ss_pred eeecCceEEEEe
Q 023414 222 IEVKAGSLVLIH 233 (282)
Q Consensus 222 ~~~~~Gdvvlf~ 233 (282)
-.+++||+|||.
T Consensus 157 ~~lqpGDLvFf~ 168 (214)
T 3ne0_A 157 SQMRRGDVIFYG 168 (214)
T ss_dssp GGCCTTCEEEES
T ss_pred hhCCCCCEEEec
Confidence 368999999994
No 92
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=22.69 E-value=44 Score=23.97 Aligned_cols=21 Identities=10% Similarity=0.088 Sum_probs=18.5
Q ss_pred EeeecCceEEEEeCccccCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSF 241 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~ 241 (282)
...+++||++++.....|.-.
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~~ 98 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTIR 98 (119)
T ss_dssp EEEECTTCEEEECTTCEEEEE
T ss_pred EEEECCCCEEEECCCCEEEEE
Confidence 568999999999999999853
No 93
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=22.34 E-value=1.2e+02 Score=27.88 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=28.3
Q ss_pred CeEEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEE
Q 023414 218 DFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVV 257 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~ 257 (282)
....+.+++||+++.-...||.+.... +..-..+++.+.
T Consensus 226 p~~e~~L~pGDvLYiP~g~~H~~~s~~-~~~SlhlTi~~~ 264 (489)
T 4diq_A 226 PVLQTVLEPGDLLYFPRGFIHQAECQD-GVHSLHLTLSTY 264 (489)
T ss_dssp CSEEEEECTTCEEEECTTCEEEEEBCS-SCCEEEEEEEEC
T ss_pred cceEEEECCCCEEEECCCCceEEEecC-CCceEEEeeccc
Confidence 456789999999999999999988753 233344444443
No 94
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=22.12 E-value=73 Score=27.32 Aligned_cols=24 Identities=17% Similarity=0.354 Sum_probs=21.7
Q ss_pred EEeeecCceEEEEeCccccCCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFEN 243 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n 243 (282)
..+++++||+++-.+.++|+-+..
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G 181 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCKG 181 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECSS
T ss_pred eEEEcCCCCEEEcCCCCceEecCC
Confidence 578999999999999999997765
No 95
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=22.11 E-value=51 Score=27.60 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=26.8
Q ss_pred EEeeecCceEEEEeCccccCCCCCCCC-CCceEEEEEEEe
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFENQSS-KSRHAYSLHVVE 258 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n~s~-~~R~~~~~~~~~ 258 (282)
...++++||++++.....|+-. |.++ .-|+.++.-++.
T Consensus 230 ~~~~v~~GD~~~~~~~~~h~~~-n~g~~~~~yl~~~d~nr 268 (278)
T 1sq4_A 230 DWVEVEAGDFMWLRAFCPQACY-SGGPGRFRYLLYKDVNR 268 (278)
T ss_dssp EEEEEETTCEEEEEESCCEEEE-CCSSSCEEEEEEEECSS
T ss_pred EEEEeCCCCEEEECCCCCEEEE-cCCCCCEEEEEEEEcCC
Confidence 4578999999999999999844 4344 346665554433
No 96
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=22.04 E-value=81 Score=24.39 Aligned_cols=37 Identities=30% Similarity=0.362 Sum_probs=28.3
Q ss_pred EEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~ 259 (282)
....+.+|++.++...-+|+. .|.++ +.++.++....
T Consensus 117 ~~~~l~~G~~~~~~~~~iH~V-~N~~~--~~aVSlHvY~p 153 (171)
T 3eqe_A 117 NSYFVHEGECLISTKGLIHKM-SNPTS--ERMVSLHVYSP 153 (171)
T ss_dssp EEEEEETTCEEEECTTCEEEE-ECCSS--SCEEEEEEEES
T ss_pred ceEEeCCCcEEEeCCCCEEEE-ECCCC--CCEEEEEEeCC
Confidence 356789999999999999997 45454 56777776554
No 97
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=21.98 E-value=56 Score=26.25 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=24.6
Q ss_pred EEeeecCceEEEEeCccccCCCCCCCCCCceEEEE
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSL 254 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~ 254 (282)
....+++||.+++.+.+.|+.... ....++.+++
T Consensus 191 ~~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 191 KPFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp EEEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred EEEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 357999999999999999986552 2344544443
No 98
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=21.91 E-value=75 Score=27.38 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=30.3
Q ss_pred CeEEeeecCceEEEEeCccccCCCCCCCCCCceEEEEEEEeCC
Q 023414 218 DFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETD 260 (282)
Q Consensus 218 ~~v~~~~~~Gdvvlf~~~~~H~s~~n~s~~~R~~~~~~~~~~~ 260 (282)
....+.++|||+|+.-..-||.+..-. .=.++.+.|....
T Consensus 238 ~~~~~~L~pGD~LyiP~gWwH~v~~l~---~sisvn~~~~~~~ 277 (338)
T 3al5_A 238 RRYECSLEAGDVLFIPALWFHNVISEE---FGVGVNIFWKHLP 277 (338)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEESS---CEEEEEEEECSSC
T ss_pred CCEEEEECCCCEEEECCCCeEEEeeCC---CEEEEEEEecCCc
Confidence 478899999999999999999987642 2255666665543
No 99
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=21.75 E-value=50 Score=25.34 Aligned_cols=21 Identities=10% Similarity=-0.053 Sum_probs=19.1
Q ss_pred EeeecCceEEEEeCccccCCC
Q 023414 221 PIEVKAGSLVLIHGDLIHQSF 241 (282)
Q Consensus 221 ~~~~~~Gdvvlf~~~~~H~s~ 241 (282)
...+++||+++..+...|+..
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~ 107 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIV 107 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEE
T ss_pred EEEeCCCCEEEECCCCeEeeE
Confidence 478999999999999999974
No 100
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=21.38 E-value=1.1e+02 Score=25.95 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=31.5
Q ss_pred HHHHHHhhhCcEEEEcC-CCCHHHHHHHHHHHHHHHcc
Q 023414 9 SDNLNFFNSQGYVVLES-FASDEEIEAMRKQMDHLLDG 45 (282)
Q Consensus 9 ~~~~~~f~~~Gyvvi~~-~~~~~~v~~l~~~~~~~~~~ 45 (282)
++..+++++.||+.|.| =++.+.++++.+...+.++-
T Consensus 24 ~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~l 61 (312)
T 3oox_A 24 QELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFAL 61 (312)
T ss_dssp HHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCC
Confidence 45668899999999988 58999999999999988763
No 101
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=20.79 E-value=69 Score=27.54 Aligned_cols=23 Identities=9% Similarity=0.042 Sum_probs=20.2
Q ss_pred EEeeecCceEEEEeCccccCCCC
Q 023414 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (282)
Q Consensus 220 v~~~~~~Gdvvlf~~~~~H~s~~ 242 (282)
....+++||++++....+|+-..
T Consensus 278 ~~~~l~~GD~~~ip~~~~H~~~n 300 (361)
T 2vqa_A 278 SVSRLQQGDVGYVPKGYGHAIRN 300 (361)
T ss_dssp EEEEECTTCEEEECTTCEEEEEC
T ss_pred EEEEECCCCEEEECCCCeEEeEE
Confidence 46899999999999999998654
Done!