BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023415
(282 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 239 bits (611), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 163/254 (64%), Gaps = 7/254 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
MAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++PD+I+
Sbjct: 196 MAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 254
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
FYG++ +S+D RI+N HF R+ L+D+ KV+ HGG D+
Sbjct: 255 IQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA----HGGTWDQ 310
Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
+ IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN KPLA Y+F+NN+
Sbjct: 311 SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNE 370
Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
K+ ++ + S+GG+ ND VH+ V +LPFGGV SGMGAYHGK SF+ FSH+++ L +
Sbjct: 371 KVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 430
Query: 241 GFIGDVP--VRYPP 252
+ + RYPP
Sbjct: 431 SLLNEEAHKARYPP 444
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 161/254 (63%), Gaps = 7/254 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
M AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++PD+I+
Sbjct: 213 MTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 271
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
FYG++ +S+D RI+++ HF R+ L++ KV+ +GG D
Sbjct: 272 IQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA----YGGTGDA 327
Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
IAPT+L DV S +M EEIFGP+LPI+ V +E++ IN KPLA Y+F++N
Sbjct: 328 ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSND 387
Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
K+ ++ + S+GG+ ND VH+ +HSLPFGGV SGMG+YHGK SF+ FSH+++ L R
Sbjct: 388 KVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR 447
Query: 241 GFIGD--VPVRYPP 252
+ D + VRYPP
Sbjct: 448 PLMNDEGLKVRYPP 461
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 10/239 (4%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
M AAAKHLTPV+LELGGK P++ +L +++ GK+ N+GQ CI+PD++
Sbjct: 223 MQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTCIAPDYL----- 276
Query: 61 YAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 119
Y K L E ++V RL LL+ G+++ G + D
Sbjct: 277 YVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQAD 334
Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLFTN 178
+K ++ T++ V + +MSEE+FGP+LP+L D + + D +N KPLA Y+F
Sbjct: 335 VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGK 394
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + + + +G +N +H LPFGG+ SGMG YHG FS+ F+HKK+V
Sbjct: 395 DMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
M AAAKHLTPV+LELGGK P++ +L +++ GK+ N+GQ I+PD++
Sbjct: 223 MQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIAPDYL----- 276
Query: 61 YAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 119
Y K L E ++V RL LL+ G+++ G + D
Sbjct: 277 YVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQAD 334
Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLFTN 178
+K ++ T++ V + +MSEE+FGP+LP+L D + + D +N KPLA Y+F
Sbjct: 335 VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGK 394
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + + + +G +N +H LPFGG+ SGMG YHG FS+ F+HKK+V
Sbjct: 395 DMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 9/243 (3%)
Query: 1 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
M AAA+ + PV LELGGKSP VVFD NL +A + G + N GQ C + +I +
Sbjct: 260 MTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQE 318
Query: 60 DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
+ A +PLE L +V++ + ++ K + + K G I+ GGE
Sbjct: 319 NIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGE 378
Query: 118 RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
R K + PT++ DV I EE+FGP+L + T E + ++ N L A
Sbjct: 379 RPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAA 438
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ + + K ++F + G + IN + LP+GG + SG G GK+ + F +
Sbjct: 439 VMSKDVKRCERFTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNI 496
Query: 235 KAV 237
K V
Sbjct: 497 KQV 499
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 1 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
M AAA+ + PV L LGGKSP VVFD NL +A + G + N GQ C + +I +
Sbjct: 260 MTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQE 318
Query: 60 DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
+ A +PLE L +V++ + ++ K + + K G I+ GGE
Sbjct: 319 NIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGE 378
Query: 118 RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
R K + PT++ DV I EE+FGP+L + T E + ++ N L A
Sbjct: 379 RPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAA 438
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ + + K ++F + G + IN + LP+GG + SG G GK+ + F +
Sbjct: 439 VMSKDVKRCERFTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNI 496
Query: 235 KAV 237
K V
Sbjct: 497 KQV 499
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 8/230 (3%)
Query: 11 VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXX 70
+ LELGG +P + +L A +I G + GQ CIS I+ + A
Sbjct: 238 IALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFV 296
Query: 71 XXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDKNKLRIAPT 128
NPL+ K D+ +++ H + K+++ GK++ GG+RDK PT
Sbjct: 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK--ALFYPT 354
Query: 129 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 188
+L +V RD+++ E F P++PI+ ++ E+ DI NS L + +FTN+ +F E
Sbjct: 355 IL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAE 412
Query: 189 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
+ GG+VIND+++ ++PFGGV++SG+G K++ + S+ K ++
Sbjct: 413 NLEFGGVVINDSSL-FRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTK 59
M AAA+ + PV LELGGKSP+V ++L A I G W NGQ C + +I +
Sbjct: 247 MTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFW--TNGQICSATSRLILHE 304
Query: 60 DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
A +PLE L +V+ + ++ K + + K G I+ GG
Sbjct: 305 SIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGS 364
Query: 118 RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
R K I PT++ DV + I EE+FGP+L + T E++ D+ N L A
Sbjct: 365 RPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAA 424
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ +N+ + ++ + AG + +N + P+GGV+ SG G G++ D +
Sbjct: 425 VISNDLERCERVTKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482
Query: 235 KAVLSRGFIGDVPVRY--PP 252
K V +I + P + PP
Sbjct: 483 KQVTQ--YISEEPWGWYQPP 500
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
MA AAK++T V LELGGK+P + +L++A + ++ + N+GQ C + + K
Sbjct: 238 MATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSR-VINSGQVCNCAERVYVQKG 296
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
NP E D++ ++N+ R+ + + G ++ GG+
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK 356
Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
+ K PTLLLDV ++ IM EE FGP+LP++ D +ED+ + N L + ++
Sbjct: 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIY 416
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
T N + + ++ + G IN A+ G ++SG+G GK + +
Sbjct: 417 TQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 237 V 237
V
Sbjct: 475 V 475
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
MA AAK++T V LELGGK+P + +L++A + ++ + N+GQ C + + K
Sbjct: 238 MATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSR-VINSGQVCNCAERVYVQKG 296
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLS-KLLDDDKVSGKIVHGGE 117
NP E D++ ++N+ R+ K+ + ++ GG+
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK 356
Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
+ K PTLLLDV ++ IM EE FGP+LP++ D +ED+ + N L + ++
Sbjct: 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIY 416
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
T N + + ++ + G IN A+ G ++SG+G GK + +
Sbjct: 417 TQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 237 V 237
V
Sbjct: 475 V 475
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
MA+AA+ + PV LELGGKSP+V +++ I G + NGQ C + ++ +
Sbjct: 244 MASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFW-TNGQICSATSRLLVHES 302
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
A +P E L +++ + ++ K + K G I++GG R
Sbjct: 303 IAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSR 362
Query: 119 D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
K I PT++ D+ I EE+FGP+L + T +++ + N LAA +
Sbjct: 363 PEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAV 422
Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
F+N+ + ++ + + G + +N + P+GG++ SG G G++ + + K
Sbjct: 423 FSNDLERCERITKALEVGAVWVNCS--QPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIK 480
Query: 236 AV 237
V
Sbjct: 481 QV 482
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 112/253 (44%), Gaps = 12/253 (4%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTK 59
MA+AA + PV LELGGKSP+V +++ A + G W NGQ C + ++
Sbjct: 264 MASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFW--TNGQICSATSRLLIHT 321
Query: 60 DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
A +PLE L +V+ + ++ K + + K G I+ GG
Sbjct: 322 KIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGV 381
Query: 118 RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
R + I PT++ D+ I EE+FGP+L + +++ ++ N LA
Sbjct: 382 RPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGA 441
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ + +++ Q+ E + AG + +N P+GG + SG G G+ D +
Sbjct: 442 VISGDRERCQRLSEEIDAGCIWVN--CSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSV 499
Query: 235 KAVLSRGFIGDVP 247
K V +I D P
Sbjct: 500 KQVTE--YISDEP 510
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
MA AAK++T V LELGGK+P + +L++A + ++ + N+GQ C + + K
Sbjct: 238 MATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSR-VINSGQVCNCAERVYVQKG 296
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLS-KLLDDDKVSGKIVHGGE 117
NP E D++ ++N+ R+ K+ + ++ GG+
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGK 356
Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
+ K PTLLLDV ++ IM EE FGP+LP++ D +E++ + N L + ++
Sbjct: 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIY 416
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
T N + + ++ + G IN A+ G ++SG+G GK + +
Sbjct: 417 TQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 237 V 237
V
Sbjct: 475 V 475
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 16/261 (6%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITT 58
M AA+ + PV LELGGKSP+V ++L + G C NGQ C + +I
Sbjct: 247 MTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFG---CFFTNGQICSATSRLIVH 303
Query: 59 KDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGE 117
+ A +PLE L IV+ + ++ + K G + G
Sbjct: 304 ESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGG 363
Query: 118 RDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
R L+ + PT++ DV I EE+FGP+L + T E++ ++ N L +
Sbjct: 364 RRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGS 423
Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233
+ +N+ + ++ + + AG + IN + P+GG++ SG G G++ + +
Sbjct: 424 AVMSNDLERCERLSKALQAGIVWIN--CAQPSFIQAPWGGIKRSGFGRELGEWGLENYLS 481
Query: 234 KKAVLSRGFIGDVPVRY--PP 252
K V + D P + PP
Sbjct: 482 VKQVTR--YTSDEPWGWYQPP 500
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 14/243 (5%)
Query: 4 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
+A+++TPV+LELGGK+P+V +L A + G++ N GQ C + +
Sbjct: 247 SAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFA-NCGQVCTCVERLYVHASVYD 305
Query: 64 XXXXXXXXXXXXFYGKNPLES-KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG------ 116
+P+++ + N + ++ + G V G
Sbjct: 306 EFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATV 365
Query: 117 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
E + PT+L+DV +D++++ EE FGP+LPI+ V +E + + N L+AY+
Sbjct: 366 EGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVH 425
Query: 177 TNNKKLKQQFVETVSAGGLVIND--TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
T + Q + + G + IN H H+ G ++SG G GKF + + K
Sbjct: 426 TQSFANINQAISDLEVGEVYINRGMGEQHQGFHN----GWKQSGFGGEDGKFGLEQYLEK 481
Query: 235 KAV 237
K V
Sbjct: 482 KTV 484
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 4 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
AAK V LELGGKSP + +++K A + GK N GQ C + ++
Sbjct: 238 AAKDFKKVSLELGGKSPYIVLDDVDIKEAAK-ATTGKVVNNTGQVCTAGTRVLVPNKIKD 296
Query: 64 XXXXXXXXXXXXFYGKNPLES-KDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKN 121
NP E + I++ F ++ ++ G ++ +GG
Sbjct: 297 AFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPE 356
Query: 122 KLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
L PT+ ++V I EEIFGP+ ++T + ++++ I N LA Y+
Sbjct: 357 GLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIG 416
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+K+ + ++ AG + IN+ LPFGG ++SG+G G + + F K++
Sbjct: 417 KDKETLHKVARSIEAGTVEINEAGRK---PDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 14/255 (5%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
M +AK + V LELGGKSP++ L+ A R +M + GQ C + + ++
Sbjct: 250 MEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQRE 308
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE- 117
P +PL ++ + +++ ++ + K G +++ GGE
Sbjct: 309 IMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEP 368
Query: 118 ------RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
+ KN ++P +L + D + EEIFGP++ +L D E+ N+ T L
Sbjct: 369 LTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGL 428
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
A+ +FT + + + AG IN ++ +PFGG + SG G +G+ + D +
Sbjct: 429 ASGVFTRDISRAHRVAANLEAGTCYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYY 486
Query: 232 SHKKAVLSRGFIGDV 246
S K V+ +GDV
Sbjct: 487 SQLKTVIVE--MGDV 499
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 3/231 (1%)
Query: 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
+ P++LELGGK + +L++ + +I G +G + GQ C + ++ + A
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVE 302
Query: 68 XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
NP + D++ ++++ + L++D G + + L I P
Sbjct: 303 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICP 361
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
L V D + EE FGP+LPI+ V +E++ +I N L A +FTN+
Sbjct: 362 ILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA 421
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
E + G + IN+ + PF G ++SG G K+S + + K+V+
Sbjct: 422 EQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 3/231 (1%)
Query: 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
+ P++LELGGK + +L++ + +I G +G + GQ C + ++ + A
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVE 302
Query: 68 XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
NP + D++ ++++ + L++D G + + L I P
Sbjct: 303 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICP 361
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
L V D + EE FGP+LPI+ V +E++ +I N L A +FTN+
Sbjct: 362 ILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA 421
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
E + G + IN+ + PF G ++SG G K+S + + K+V+
Sbjct: 422 EQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 3/220 (1%)
Query: 7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXX 66
HL V++E+GGK VV D +L +A +++ +G + GQ C + + KD
Sbjct: 280 HLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFS-GQKCSAGSRAVIHKDVYDEVL 338
Query: 67 XXXXXXXXXFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LR 124
+P + + +++ F ++ ++ K G+++ GGE D +
Sbjct: 339 EKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFF 398
Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
I PT++ D+ +++IM EEIFGP++ + + + +I N+ L + T N+ +
Sbjct: 399 IQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIE 458
Query: 185 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
Q G L N V PFGG + SG + G
Sbjct: 459 QAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 3/231 (1%)
Query: 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
+ P++L LGGK + +L++ + +I G +G + GQ C + ++ + A
Sbjct: 244 MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVE 302
Query: 68 XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
NP + D++ ++++ + L++D G + + L I P
Sbjct: 303 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICP 361
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
L V D + EE FGP+LPI+ V +E++ +I N L A +FTN+
Sbjct: 362 ILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA 421
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
E + G + IN+ + PF G ++SG G K+S + + K+V+
Sbjct: 422 EQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V LELGGKSP + S ++ A + + N GQ C + +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + AG + +N V A PFGG + SG G G++ ++ K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGQELGEYGLQAYTEVKTV 491
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 9/240 (3%)
Query: 4 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YA 62
AA+ L P LELGGKS + ++L A M+ N GQ C++ I+ + Y
Sbjct: 244 AAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYD 302
Query: 63 PXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK- 120
G + + +++ R+ + G ++V GG R +
Sbjct: 303 EIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG 362
Query: 121 --NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
N I PT+ DV I EEIFGP+L I+ D ED+ I N LA ++T
Sbjct: 363 LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTT 422
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
+ + + + G IN A PFGG + SG+G +G + F+ +K+VL
Sbjct: 423 DVPKGIKISQQIRTGTYGINWYAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V LELGGKSP + S ++ A + + N GQ C + +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + AG + +N V A PFGG + SG G G++ ++ K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V LELGGKSP + S ++ A + + N GQ C + +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + AG + +N V A PFGG + SG G G++ ++ K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V LELGGKSP + S ++ A + + N GQ C + +D
Sbjct: 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 307
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 308 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 367
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 368 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 427
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + AG + +N V A PFGG + SG G G++ ++ K V
Sbjct: 428 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 485
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 3/231 (1%)
Query: 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
+ P++LELGGK + +L++ + +I G +G + GQ + ++ + A
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYS-GQRSTAVKRVLVMESVADELVE 302
Query: 68 XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
NP + D++ ++++ + L++D G + + L I P
Sbjct: 303 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICP 361
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
L V D + EE FGP+LPI+ V +E++ +I N L A +FTN+
Sbjct: 362 ILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA 421
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
E + G + IN+ + PF G ++SG G K+S + + K+V+
Sbjct: 422 EQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 13 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXX 71
+E GGK+ ++ D + +A +++ +G GQ C + +I T+ Y P
Sbjct: 287 VETGGKNAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 72 XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLL 130
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+
Sbjct: 346 AERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVF 404
Query: 131 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 190
+VP + I EEIFGP+L ++ V ++ ++ N L +++ ++ +
Sbjct: 405 TEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREF 464
Query: 191 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 240
G L N V PFGG + SG A G + +F KAV R
Sbjct: 465 HVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 4 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
AA+ + V LELGGK P + + +L A + G + N GQ CIS ++ +
Sbjct: 260 AARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRD 318
Query: 64 XXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--D 119
+PL E + ++ H ++ + SG +++ GGER
Sbjct: 319 ALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGR 378
Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 179
+ L APT+ V D I EEIFGP+L LT +++ + N+ L+A +++ N
Sbjct: 379 EAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTN 438
Query: 180 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ Q + + AG IN +V LP GG ++SG+G G++ FD +S K V
Sbjct: 439 LETALQTIRRIRAGRCWIN--SVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 5/231 (2%)
Query: 13 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXX 71
+E GGK ++ D + +A +++ +G GQ C + +I T+ Y P
Sbjct: 287 VETGGKDAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 72 XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLL 130
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+
Sbjct: 346 AERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVF 404
Query: 131 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 190
+VP + I EEIFGP+L ++ V ++ ++ N L +++ ++ +
Sbjct: 405 TEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREF 464
Query: 191 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 240
G L N V PFGG + SG A G + +F KAV R
Sbjct: 465 HVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 9/242 (3%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
AAAA HL V +ELGGKSP++ +++ A ++G + ++GQ C + + K
Sbjct: 246 AAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKA 304
Query: 62 APXXXXXXXXXXXXFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
+PL+ + L +V+ ++ ++ K G ++ GG
Sbjct: 305 KARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIP 364
Query: 120 KN----KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
N + PT+ DV D I EEIFGP++ +L D ++ N+ LA +
Sbjct: 365 NNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGV 424
Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
FT + + V+ + AG L IN +L +PFGG ++SG G + + + +S K
Sbjct: 425 FTADLARAHRVVDGLEAGTLWIN--TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482
Query: 236 AV 237
V
Sbjct: 483 TV 484
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 6/240 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V L+LGGKSP + S ++ A + + N GQ+C + +D
Sbjct: 255 VAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQSCSAGSRTFVQED 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + AG + +N V A PFGG + SG G G++ ++ K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
+ PV+LELGGK P + +LK+ +++ G + + GQ C + + A
Sbjct: 253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYS-GQRCTAIKRVFVQDSVADQLVA 311
Query: 68 XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
+P + D++ +++ A + L+DD +G + G + + L ++P
Sbjct: 312 NIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL-LSP 370
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
TLL DV + EE FGP+LPI+ V ++ + N L A +FT +
Sbjct: 371 TLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIG 430
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
+ + G + IN H PF GV++SG+G
Sbjct: 431 KHLEVGTVHINAKTERGPDH-FPFLGVKKSGLG 462
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Query: 13 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXX 72
+E GGK ++ D + +A +++ +G + + I+T Y P
Sbjct: 287 VETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRA 346
Query: 73 XXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLL 131
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+
Sbjct: 347 ERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFT 405
Query: 132 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 191
+VP + I EEIFGP+L ++ V ++ ++ N L +++ ++ +
Sbjct: 406 EVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFH 465
Query: 192 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 240
G L N V PFGG + SG A G + +F KAV R
Sbjct: 466 VGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 98/234 (41%), Gaps = 6/234 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V LELGGKSP + S ++ A + + N GQ C + +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
+ + + AG + +N V A PFGG + SG G G++ +
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 9/244 (3%)
Query: 4 AAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY- 61
AA + V +ELGG +P +VFDS N+ A + K+ N GQ C+ + + +
Sbjct: 248 AANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQFLVQRGIH 305
Query: 62 -APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
A G E ++N ++ K ++D G +V GG+R
Sbjct: 306 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 365
Query: 120 K-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
+ K PTLL +V +D L EE FGPL P++ D E++ I N+ LA Y ++
Sbjct: 366 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 425
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
+ + E + G + +N+ + PFGGV++SG+G K+ D + K V
Sbjct: 426 DPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483
Query: 239 SRGF 242
G
Sbjct: 484 YGGL 487
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V LELGGKSP + S ++ A + + N GQ + +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQED 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + AG + +N V A PFGG + SG G G++ ++ K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V LELGGKSP + S ++ A + + N GQ + +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCXCAGSRTFVQED 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + + AG + +N V A PFGG + SG G G++ ++ K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 8/244 (3%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA +L V LE+GGKSP + S ++ A + + N GQ C + +D
Sbjct: 254 VAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 312
Query: 61 -YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
YA G NP +S+ + V+ F ++ + K G K++ GG
Sbjct: 313 IYAEFVERSVARAKSRVVG-NPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGG 371
Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
++ I PT+ D+ I EEIFGP++ IL +E+ N+ LAA +F
Sbjct: 372 AAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVF 431
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
T + + + AG + +N V A PFGG + SG G G++ ++ K
Sbjct: 432 TKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKLSGSGRELGEYGLQAYTEVKT 489
Query: 237 VLSR 240
V R
Sbjct: 490 VTVR 493
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 11/224 (4%)
Query: 7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPXX 65
HL V+ E+GGK VV D ++++A + + +G GQ C + ++ K Y
Sbjct: 280 HLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFA-GQKCSAGSRAVVHEKVYDEVL 338
Query: 66 XXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LR 124
G+ + +++ F ++ ++ K G++V GG+ D +K
Sbjct: 339 KRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYF 398
Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK---- 180
I PT+ D+ + +M EEIFGP++ V +++ ++ N+ L + T N+
Sbjct: 399 IEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHIN 458
Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
+ KQ+F G L N V PFGG + SG + G
Sbjct: 459 RAKQEF----HVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
AA +L V LELGGKSP + + +L A G + + GQ CI+ + +
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESI 315
Query: 62 APXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
+ NPL + +S+ ++ + ++ L++ K G K+ GG
Sbjct: 316 YDEFVRRSVERAKKYVLGNPL-TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGP 374
Query: 119 DKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
NK I PT+ DV D I EEIFGP+ I+ ++D N+ L+A +FT
Sbjct: 375 WGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFT 434
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
N+ + +G + +N +V A PFGG + SG G G++ F ++ K V
Sbjct: 435 NDIDKAITVSSALQSGTVWVNCYSVVSA--QCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 6/234 (2%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
+AA + +L V LELGGKSP + S ++ A + + N GQ + +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQED 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
NP +SK + V+ F ++ ++ K G + GG
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
I PT+ DV I EEIFGP++ IL IE+ N+ T LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
+ + + AG + +N V A PFGG + SG G G++ +
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 9/244 (3%)
Query: 4 AAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY- 61
AA + V +ELGG +P +VFDS N+ A + K+ N GQ + + + +
Sbjct: 248 AANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTAVCSNQFLVQRGIH 305
Query: 62 -APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
A G E ++N ++ K ++D G +V GG+R
Sbjct: 306 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 365
Query: 120 K-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
+ K PTLL +V +D L EE FGPL P++ D E++ I N+ LA Y ++
Sbjct: 366 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 425
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
+ + E + G + +N+ + PFGGV++SG+G K+ D + K V
Sbjct: 426 DPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483
Query: 239 SRGF 242
G
Sbjct: 484 YGGL 487
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 10/242 (4%)
Query: 4 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDY 61
AA+ P LELGGK P + NL++A ++ WG N GQ+C+S + I +
Sbjct: 222 AARRFIPAYLELGGKDPAIVLESANLELATSAIL---WGAVVNTGQSCLSIERIYVAESK 278
Query: 62 APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG---E 117
PL E + I+ ++ + D G ++H G E
Sbjct: 279 FEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVE 338
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
PT+ +V + +EE FGP+ P+ +E++ + N L+A +F
Sbjct: 339 ELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFA 398
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHKKA 236
++ + ++AG + IND A+ H SG+G G F K+A
Sbjct: 399 GSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQA 458
Query: 237 VL 238
L
Sbjct: 459 FL 460
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 1 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
M AA ++T + LELGGK+P ++FD + ++A + + G + + GQ C + I+
Sbjct: 266 MKNAANNVTNIALELGGKNPNIIFDDA-DFELAVDQALNGGY-FHAGQVCSAGSRILVQN 323
Query: 60 DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
N ++ ++ ++++ H ++ +D K G I GG+
Sbjct: 324 SIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK 383
Query: 118 R-DKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
R D++ L+ PT++ + I+ EE+FGP++ + + +++ + N LA
Sbjct: 384 RPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLA 443
Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
+F+ + Q+ + G + IND H P+GG ++SG+G GK + +
Sbjct: 444 GAVFSKDIGKAQRVANKLKLGTVWIND--FHPYFAQAPWGGYKQSGIGRELGKEGLEEYL 501
Query: 233 HKKAVLS 239
K +L+
Sbjct: 502 VSKHILT 508
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 8/235 (3%)
Query: 1 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI-ITT 58
MA +A + + LELGG +P +VFD +L A I K+ NNGQ C+ + +
Sbjct: 244 MAQSAPTVKKLTLELGGNAPFIVFDDA-DLDAAVEGAIASKYR-NNGQTCVCTNRFFVHE 301
Query: 59 KDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
+ Y G+ L ++N ++ + D G ++ GG+
Sbjct: 302 RVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGK 361
Query: 118 RDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
R PT+L V D + EE FGPL P+ E+ + N LAAYL+
Sbjct: 362 RHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLY 421
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
+ + + E + G + IN + V PFGGV++SG+G + D +
Sbjct: 422 SRDIGRVWRVAEALEYGMVGINTGLISNEVA--PFGGVKQSGLGREGSHYGIDDY 474
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 101/247 (40%), Gaps = 18/247 (7%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
MA A + + LELGG +P + +L A ++ K+ N GQ C+ + I +
Sbjct: 264 MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRG 322
Query: 61 -YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
Y G + ++ ++ ++D G K++ GG +
Sbjct: 323 VYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGG-K 381
Query: 119 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
+ L P +L V D L+ EE FGPL P+ D E+ N LAAY +T
Sbjct: 382 ELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTE 441
Query: 179 NKKLKQQFVETVSAG------GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
N + E + G GL+ N+ A PFGGV++SG+G K+ + +
Sbjct: 442 NFSRAIRVSEALEYGMVGHNTGLISNEVA--------PFGGVKQSGLGREGSKYGIEEYL 493
Query: 233 HKKAVLS 239
K + S
Sbjct: 494 ETKYICS 500
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 6/233 (2%)
Query: 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
L +LELGG P + + +L++A + + G++ N GQ C + I + A
Sbjct: 228 LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQVCAAAKRFIVEEGIAQAFTD 286
Query: 68 XXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI 125
+PL E DL + L + + G +++ GGE+ +
Sbjct: 287 RFVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNY 346
Query: 126 -APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
A T+L DV D +E+FGP+ I + + N L+A +FT + L
Sbjct: 347 YAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAA 406
Query: 185 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + GG+ IN + A + FGGV++SG G F F + + V
Sbjct: 407 EXAARLECGGVFINGYSASDA--RVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 17/249 (6%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
M AA HL + ELGGKSP + + +L+ A ++ + N G+ C + ++ +
Sbjct: 258 MRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFN-GERCTASSRLLVEEK 316
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
+PL+ + ++ +++ H R+ ++ K G +++ GGER
Sbjct: 317 IFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGER 376
Query: 119 DKNKLR---------IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 169
K R + PT+ + I EEIFGP+L + E++ N
Sbjct: 377 AKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKY 435
Query: 170 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSF 228
LAAY+FT + + + + AG + +N V HL PFGGV+ SG G ++
Sbjct: 436 GLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPT---PFGGVKGSGDRREGGTYAL 492
Query: 229 DVFSHKKAV 237
D ++ K +
Sbjct: 493 DFYTDLKTI 501
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 8/240 (3%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD- 60
AA +L V LELGGKSP + + +L A + G + N GQ C + I +
Sbjct: 255 AAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVF-FNQGQCCTAGSRIFVEESI 313
Query: 61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD- 119
Y G + + ++ + ++ +L+ G + G +
Sbjct: 314 YEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGL 373
Query: 120 -KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
+ I PT+ +V D I EEIFGP+ IL +++ + N+ L A +FTN
Sbjct: 374 GRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTN 433
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + AG + IN + A+++ PFGG + SG G G+F +S K V
Sbjct: 434 DINKALMVSSAMQAGTVWIN---CYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 490
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 13 LELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXX 70
+ELGGK+PV VFD V G + N GQ C + I K Y
Sbjct: 266 MELGGKAPVIVFDDADIEAVVEGVRTFGYY--NAGQDCTAACRIYAQKGIYDTLVEKLGA 323
Query: 71 XXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDK-NKLRIAP 127
G ES +L + + H R+ K +++ K +G K++ GGE+ K N AP
Sbjct: 324 AVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAP 383
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
TLL +D I+ +E+FGP++ + D E + N LA+ ++T + +
Sbjct: 384 TLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVS 443
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG---AYHGKFSFDVFSH 233
+ G +N + V +P GG + SG G + +G + V H
Sbjct: 444 ARLQYGCTWVNTH--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 490
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+A++ L V +ELGGKSP++ +L A +M + ++GQ C + + +
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQ 298
Query: 62 APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
+P E+ + +V+ H + ++ K +++ GGER
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
+ +APT+ D D I+ EEIFGP++ IL D +++ N LAA
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ T + + + + AG IN A +P GG ++SG+G +G + ++
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 476
Query: 235 KAV 237
K+V
Sbjct: 477 KSV 479
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+A++ L V +ELGGKSP++ +L A +M + ++GQ C + + +
Sbjct: 239 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQ 297
Query: 62 APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
+P E+ + +V+ H + ++ K +++ GGER
Sbjct: 298 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 357
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
+ +APT+ D D I+ EEIFGP++ IL D +++ N LAA
Sbjct: 358 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 417
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ T + + + + AG IN A +P GG ++SG+G +G + ++
Sbjct: 418 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 475
Query: 235 KAV 237
K+V
Sbjct: 476 KSV 478
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 18/240 (7%)
Query: 1 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
M AK + V LELGG +P +VFD +L A + K+ N GQ C+ + +
Sbjct: 241 MEQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQD 298
Query: 60 DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG- 116
+ + L++ + +++ A++ + + D G ++V GG
Sbjct: 299 GVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 358
Query: 117 --ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPL 171
ER N + PT+L+DVP ++ + EE FGPL P+ + +D D+I N L
Sbjct: 359 AHERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGL 413
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
AAY + + + E + G + IN + V PFGG++ SG+G K+ + +
Sbjct: 414 AAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 18/240 (7%)
Query: 1 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
M AK + V LELGG +P +VFD +L A + K+ N GQ C+ + +
Sbjct: 241 MEQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQD 298
Query: 60 DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG- 116
+ + L++ + +++ A++ + + D G ++V GG
Sbjct: 299 GVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 358
Query: 117 --ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPL 171
ER N + PT+L+DVP ++ + EE FGPL P+ + +D D+I N L
Sbjct: 359 AHERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGL 413
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
AAY + + + E + G + IN + V PFGG++ SG+G K+ + +
Sbjct: 414 AAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 10/243 (4%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+A++ L V + LGGKSP++ +L A +M + ++GQ C + + +
Sbjct: 239 SASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQ 297
Query: 62 APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
+P E+ + +V+ H + ++ K +++ GGER
Sbjct: 298 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 357
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
+ +APT+ D D I+ EEIFGP++ IL D +++ N LAA
Sbjct: 358 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 417
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ T + + + + AG IN A +P GG ++SG+G +G + ++
Sbjct: 418 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 475
Query: 235 KAV 237
K+V
Sbjct: 476 KSV 478
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 10/243 (4%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+A++ L V +ELGGKSP++ +L A +M + ++GQ + + +
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVATNGTRVFIHRSQ 298
Query: 62 APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
+P E+ + +V+ H + ++ K +++ GGER
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
+ +APT+ D D I+ EEIFGP++ IL D +++ N LAA
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ T + + + + AG IN A +P GG ++SG+G +G + ++
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 476
Query: 235 KAV 237
K+V
Sbjct: 477 KSV 479
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 10/243 (4%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+A++ L V +ELGGKSP++ +L A +M + ++GQ + + +
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVXTNGTRVFIHRSQ 298
Query: 62 APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
+P E+ + +V+ H + ++ K +++ GGER
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
+ +APT+ D D I+ EEIFGP++ IL D +++ N LAA
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
+ T + + + + AG IN A +P GG ++SG+G +G + ++
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 476
Query: 235 KAV 237
K+V
Sbjct: 477 KSV 479
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 8/240 (3%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
AAA +L V LELG K+P + + +L A G + N GQ+CI+ + +
Sbjct: 257 AAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVF-TNQGQSCIAASKLFVEEAI 315
Query: 62 APXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
+ NPL + +N ++ +L++ K G K+ GG
Sbjct: 316 YDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPW 375
Query: 120 KNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
NK I PT+ +V D I EEIFGP+ I+ +++ N+ L A +FT
Sbjct: 376 GNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTK 435
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ + AG + +N +LA + P GG + SG G G++ ++ K V
Sbjct: 436 DLDKAVTVSSALQAGTVWVN---CYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTV 492
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 6/236 (2%)
Query: 4 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YA 62
A + + LELGG +P S ++ A I GK+ + GQ C+ + II +D Y
Sbjct: 243 AGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYD 301
Query: 63 PXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKN 121
YG + ++N + ++++ K G ++ G+R N
Sbjct: 302 EFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGN 361
Query: 122 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 181
L P + + +S I E+F P+ I+ +++ D+ N L++ +FT++ +
Sbjct: 362 VL--TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLE 419
Query: 182 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
++F + +G +ND +V+ + ++ FGG + SG+G + + + F+ K +
Sbjct: 420 KGEKFALQIDSGMTHVNDQSVNDS-PNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
+ V LELGG +P V + ++ A + +G + + GQ C+S + +I
Sbjct: 254 MKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLE 312
Query: 68 XXXXXXXXFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIA 126
+P E + ++N + + L + ++ K G V + +L +
Sbjct: 313 KFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VH 371
Query: 127 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 186
P + DV D I EEIFGPL+ +L D + ++ N+ L+A +++ + QF
Sbjct: 372 PHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQF 431
Query: 187 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
+ +G + IND V+ H + FGG + SG+G ++G ++ + F+ + +
Sbjct: 432 ALQIDSGMVHINDLTVNDEPHVM-FGGSKNSGLGRFNGDWAIEEFTTDRWI 481
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
+ PT+ +V + I +EIF P+L ++ V ++++ +I N A LFT+N +
Sbjct: 363 VGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIR 422
Query: 185 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH--GKFSFDVFSHKKAVLSR 240
F E + AG L IN V + PF G + S G H GK S D ++ KK V +R
Sbjct: 423 YFRENIDAGMLGIN-LGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 8/242 (3%)
Query: 5 AKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPX 64
A+ + + LELGG +P + +L+ A +I K+ GQ C+ + I + A
Sbjct: 247 AEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFR-GGGQTCVCANRIFVHEKVADA 305
Query: 65 -XXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK--- 120
G + D+ ++N F ++ + L D G + G++
Sbjct: 306 FGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELG 365
Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
+ L PT++ V R+ EE FGPL+P E+ D N LA+Y+FT +
Sbjct: 366 DGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADA 425
Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
+ Q+ + G + N PFGG + SG+G G F + V R
Sbjct: 426 ERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV-PR 482
Query: 241 GF 242
GF
Sbjct: 483 GF 484
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 87 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 143
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 144 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 198
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 199 DTAVHLAVHSLPFGGVQESG 218
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 87 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 143
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 144 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 198
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 199 DTAVHLAVHSLPFGGVQESG 218
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 87 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 143
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 144 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 198
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 199 DTAVHLAVHSLPFGGVQESG 218
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 87 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 143
S ++++ FAR+ K L+ + S I+ GG+ +++ + P ++ IM EE
Sbjct: 388 FSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEE 447
Query: 144 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 198
IFGP+L + DK ++ +++S T L +F +K + Q+ + +AG IN
Sbjct: 448 IFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYIN 507
Query: 199 DTAVHLAVHSLPFGGVQESG 218
D + V PFGG + SG
Sbjct: 508 DKSTGSVVGQQPFGGARASG 527
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 12/224 (5%)
Query: 3 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 62
AA K+L ELGG + + +V R ++ N+GQ C S II K
Sbjct: 220 AAGKNLKKSTXELGGNDAFIVLDDADPQV-LRNVLNDARTYNDGQVCTSSKRIIVEKSRY 278
Query: 63 PXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF-----ARLSKLLDDDKVSGKIVHG-G 116
+PLE+ NS A++ + +D K+ +
Sbjct: 279 DEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAID---AGAKVFYQYP 335
Query: 117 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
E D PT+L D+ +D+ + +E+FGP+ + V+ + + N + L + +
Sbjct: 336 EIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVI 395
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
++ ++ + G VIN + LPFGG+++SG G
Sbjct: 396 GSDIDRAKKVSAQIETGXTVIN--GRWITSGELPFGGIKKSGYG 437
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 18/246 (7%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+ A ++ V LELGGKSP++ + +L A +M M N G+ CI+ + +
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESI 334
Query: 62 APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
NPLE R N NH A L KL++ K +V
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
GG + + PT+ DV I EE FGP++ I ++ N+ L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
A+ +FT + + + AG + IN + + PFGG ++SG G G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
K V
Sbjct: 508 LRIKTV 513
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 18/246 (7%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+ A ++ V L+LGGKSP++ + +L A +M M N G+ CI+ + +
Sbjct: 276 SCALSNVKKVSLQLGGKSPLIIFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESI 334
Query: 62 APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
NPLE R N NH A L KL++ K +V
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
GG + + PT+ DV I EE FGP++ I ++ N+ L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
A+ +FT + + + AG + IN + + PFGG ++SG G G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
K V
Sbjct: 508 LRIKTV 513
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+ A ++ V L LGGKSP++ + +L A + M M N G+ CI+ + +
Sbjct: 276 SCALSNVKKVSLALGGKSPLIIFADCDLNKAVQ-MGMSSVFFNKGENCIAAGRLFVEESI 334
Query: 62 APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
NPLE R N NH A L KL++ K +V
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
GG + + PT+ DV I EE FGP++ I ++ N+ L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
A+ +FT + + + AG + IN + + PFGG ++SG G G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
K V
Sbjct: 508 LRIKTV 513
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 31/250 (12%)
Query: 4 AAKHLTPVLLELGGK-SPVVF-DSGIN-LKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
A+ L V LELGGK + ++F D+ I+ L+ R N+GQ+C +P ++ +
Sbjct: 260 ASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFY-----NSGQSCNAPTRMLVEQA 314
Query: 61 -YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-- 116
Y G + +V+ + ++ L+ G +V GG
Sbjct: 315 IYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTG 374
Query: 117 -----ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
ER + PT+ DV I EEIFGP+L +L + +++ + N L
Sbjct: 375 LPMGMERG---YYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGL 431
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP----FGGVQESGMGAYHGKFS 227
Y+ + ++ ++ V +G + +N H LP FGGV+ SG G +
Sbjct: 432 TNYIQSQDRSKCRRIAAQVRSGMVEVNG-------HELPGGSYFGGVKFSGRAREGGLWG 484
Query: 228 FDVFSHKKAV 237
F KA+
Sbjct: 485 IKEFLDTKAI 494
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+ A ++ V LELGGKSP++ + +L A +M M N G+ I+ + +
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESI 334
Query: 62 APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
NPLE R N NH A L KL++ K +V
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
GG + + PT+ DV I EE FGP++ I ++ N+ L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
A+ +FT + + + AG + IN + + PFGG ++SG G G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
K V
Sbjct: 508 LRIKTV 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+ A ++ V LELGGKSP++ + +L A +M M N G+ I+ + +
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNKGENSIAAGRLFVEESI 334
Query: 62 APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
NPLE R N NH A L KL++ K +V
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
GG + + PT+ DV I EE FGP++ I ++ N+ L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
A+ +FT + + + AG + IN + + PFGG ++SG G G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
K V
Sbjct: 508 LRIKTV 513
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 11/238 (4%)
Query: 1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM-IMGKWGCNNGQACISPDHIITTK 59
+AAAAK + LELGGK+PV+ +L+ + G + N GQ C + I
Sbjct: 256 LAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY--NAGQDCTAACRIYAEA 313
Query: 60 D-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDD--DKVSGKIVHGG 116
Y Y + ++ +++ R++ ++ D+ +I GG
Sbjct: 314 GIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGG 373
Query: 117 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
++ PT++ ++ I+ E+FGP++ + +D+ N LA+ +
Sbjct: 374 RTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSV 433
Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAV-HSLPFGGVQESGMGAYHGKFSFDVFS 232
+T + + + G IN H + + P GG+++SG G ++ + ++
Sbjct: 434 WTKDISKAXRAASRLQYGCTWIN---THFXLTNEXPHGGIKQSGYGKDXSVYALEDYT 488
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 18/246 (7%)
Query: 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
+ A ++ V L LGGKSP++ + +L A + M M N G+ I+ + +
Sbjct: 276 SCALSNVKKVSLALGGKSPLIIFADCDLNKAVQ-MGMSSVFFNKGENAIAAGRLFVEESI 334
Query: 62 APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
NPLE R N NH A L KL++ K +V
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
GG + + PT+ DV I EE FGP++ I ++ N+ L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
A+ +FT + + + AG + IN + + PFGG ++SG G G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
K V
Sbjct: 508 LRIKTV 513
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Query: 83 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVPR 135
E D +V R+ L+D G K+V G RD +N I L DV
Sbjct: 340 EKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDDVTP 398
Query: 136 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 195
D I EIFGP+L ++ E++ + ++T + + F ++ G +
Sbjct: 399 DXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGXV 458
Query: 196 VIN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 240
+N V LA HS FGG + S G HG S ++ K + SR
Sbjct: 459 GVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%)
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
T++ + + I EEIFGP+L ++ + + + NS L +F+ + + +
Sbjct: 896 TIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
G L IN V PFGG + SG+G G
Sbjct: 956 REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 130 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 189
+LDV + EE FGPLL ++ + N+ LAA L +++++ +QF+
Sbjct: 367 ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFL-V 425
Query: 190 VSAGGLVINDTAVHLAVHSLPFGGVQESG 218
S G+V + + A S PFGG+ SG
Sbjct: 426 ESRAGIVNWNKQLTGAASSAPFGGIGASG 454
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 99/241 (41%), Gaps = 6/241 (2%)
Query: 12 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXX 71
LLELGG + ++ +L + + G GQ C + ++ +
Sbjct: 265 LLELGGNNAIIVFEDADLNLVVPSAVFASVG-TAGQRCTTTRRLMLHESVHDAVVERIAK 323
Query: 72 XXXXFYGKNPLESKDLSRIVNSNHFA--RLSKLLDDDKVSGKIVHGGE-RDKNKLRIAPT 128
+P + L +++ L+ + + G +V GG+ D+ + PT
Sbjct: 324 AYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPT 383
Query: 129 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFV 187
++ + D+ I+ E F P+L +L E++F N + L++ +FT + ++ +
Sbjct: 384 IITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLG 443
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP 247
S G+V + A FGG + +G G G S+ + +++ + + D+P
Sbjct: 444 PKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQY-MRRSTCTINYSKDLP 502
Query: 248 V 248
+
Sbjct: 503 L 503
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 5/227 (2%)
Query: 12 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXX 71
LLELGG + ++ +L + + G GQ C + + +
Sbjct: 267 LLELGGNNAIIAFEDADLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKK 325
Query: 72 XXXXFYGKNPLESKDLSRIVNSNHFAR--LSKLLDDDKVSGKIVHGGE-RDKNKLRIAPT 128
NP + L +++ L + + K G +V+GG+ D+ + PT
Sbjct: 326 AYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPT 385
Query: 129 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFV 187
++ + D+ I E F P+L + E+ F N + L++ +FT + ++ +
Sbjct: 386 IVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLG 445
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
S G+V + A FGG + +G G G ++ + +
Sbjct: 446 PKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 492
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 30.4 bits (67), Expect = 1.0, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 140 MSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 197
++EE+FGP+L ++ + +E I L + + + ++ V G + +
Sbjct: 883 LTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYV 942
Query: 198 NDTAVHLAVHSLPFGGVQESGMGAYHG 224
N + V PFGG SG G G
Sbjct: 943 NRNMIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|2WYB|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq With A Covalently Bound Dodecanoic Acid
pdb|2WYC|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq In Complex With 3-Oxo-Lauric Acid
pdb|2WYD|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq In Complex With Dodecanoic Acid
pdb|2WYE|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq Is An Ntn-Hydrolase With An Unusual
Substrate-Binding Pocket
pdb|3L91|B Chain B, Structure Of Pseudomonas Aerugionsa Pvdq Bound To
Octanoate
pdb|3L94|B Chain B, Structure Of Pvdq Covalently Acylated With Myristate
pdb|3SRA|B Chain B, Structure Of Pseudomonas Aerugionsa Pvdq Covalently
Acylated With Myristic Acid From Pvdiq
pdb|3SRB|B Chain B, Structure Of Pseudomonas Aeruginosa Pvdq Bound To Smer28
pdb|3SRC|B Chain B, Structure Of Pseudomonas Aeruginosa Pvdq Bound To Ns2028
Length = 546
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 78 GKNPLESKDLSRIVNSNHFARLSKLLDD 105
GK PLE+K L +V +NH ++L D
Sbjct: 307 GKQPLEAKTLEEMVTANHVFSADQVLPD 334
>pdb|1FNN|A Chain A, Crystal Structure Of Cdc6p From Pyrobaculum Aerophilum
pdb|1FNN|B Chain B, Crystal Structure Of Cdc6p From Pyrobaculum Aerophilum
Length = 389
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 213 GVQESGMGAYHGKFSFDVFSHKKAVL------SRGFIGDVPVRYPPYTKGKL 258
G + +GA+ + + + H AVL +RG +G +R+ PYTK ++
Sbjct: 149 GQEADKLGAF--RIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQI 198
>pdb|3OYO|A Chain A, Crystal Structure Of Hemopexin Fold Protein Cp4 From Cow
Pea
pdb|3OYO|B Chain B, Crystal Structure Of Hemopexin Fold Protein Cp4 From Cow
Pea
Length = 225
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 135 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 183
D +++ + P+L EDS D TK YLF NK ++
Sbjct: 92 NDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGNKYVR 140
>pdb|2RSM|A Chain A, Solution Structure And Sirna-Mediated Knockdown Analysis
Of The Mitochondrial Disease-Related Protein C12orf65
(Ict2)
Length = 115
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 212
+G K A L N +L++QFV+ GG N T+ + + +P G
Sbjct: 32 AGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSG 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,472,133
Number of Sequences: 62578
Number of extensions: 348467
Number of successful extensions: 965
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 756
Number of HSP's gapped (non-prelim): 90
length of query: 282
length of database: 14,973,337
effective HSP length: 98
effective length of query: 184
effective length of database: 8,840,693
effective search space: 1626687512
effective search space used: 1626687512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)