Query 023415
Match_columns 282
No_of_seqs 185 out of 1711
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 06:24:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sza_A Aldehyde dehydrogenase, 100.0 3.8E-64 1.3E-68 475.7 25.9 252 2-259 214-468 (469)
2 2wme_A BADH, betaine aldehyde 100.0 6.6E-62 2.3E-66 461.9 26.8 236 3-241 241-483 (490)
3 3iwj_A Putative aminoaldehyde 100.0 2.8E-60 9.7E-65 453.0 26.5 238 2-242 248-490 (503)
4 3ros_A NAD-dependent aldehyde 100.0 1.7E-60 5.8E-65 452.1 23.6 239 2-243 219-460 (484)
5 3rh9_A Succinate-semialdehyde 100.0 7.2E-60 2.5E-64 449.8 25.2 237 2-241 244-484 (506)
6 3ed6_A Betaine aldehyde dehydr 100.0 1.2E-59 4E-64 449.7 25.8 237 2-241 267-510 (520)
7 3ifg_A Succinate-semialdehyde 100.0 6.5E-60 2.2E-64 448.3 23.5 236 2-240 245-483 (484)
8 3r31_A BADH, betaine aldehyde 100.0 3.6E-60 1.2E-64 452.9 21.1 239 2-243 246-490 (517)
9 1wnd_A Putative betaine aldehy 100.0 2.7E-59 9.3E-64 445.0 26.2 236 2-240 255-494 (495)
10 4h7n_A Aldehyde dehydrogenase; 100.0 1.6E-59 5.5E-64 445.1 24.1 247 2-249 220-471 (474)
11 3u4j_A NAD-dependent aldehyde 100.0 1.5E-59 5.1E-64 449.7 24.1 237 2-241 258-498 (528)
12 4f3x_A Putative aldehyde dehyd 100.0 1.1E-59 3.7E-64 448.0 22.6 236 2-240 257-496 (498)
13 3k2w_A Betaine-aldehyde dehydr 100.0 2.2E-59 7.4E-64 446.2 23.4 238 2-242 245-489 (497)
14 2imp_A Lactaldehyde dehydrogen 100.0 5.6E-59 1.9E-63 441.9 25.6 236 2-240 239-478 (479)
15 3jz4_A Succinate-semialdehyde 100.0 5.6E-59 1.9E-63 442.1 25.4 236 2-240 242-480 (481)
16 3ek1_A Aldehyde dehydrogenase; 100.0 1.2E-59 4.2E-64 448.0 20.8 236 2-241 265-502 (504)
17 3qan_A 1-pyrroline-5-carboxyla 100.0 2.7E-59 9.1E-64 448.8 23.3 239 2-241 269-516 (538)
18 3b4w_A Aldehyde dehydrogenase; 100.0 2.5E-59 8.5E-64 445.4 22.5 235 2-240 242-481 (495)
19 3prl_A NADP-dependent glyceral 100.0 2.9E-59 9.9E-64 445.8 22.9 230 8-241 253-483 (505)
20 2o2p_A Formyltetrahydrofolate 100.0 3.5E-59 1.2E-63 446.1 23.0 236 2-240 275-516 (517)
21 1bxs_A Aldehyde dehydrogenase; 100.0 5.9E-59 2E-63 443.2 24.4 237 2-241 256-496 (501)
22 1a4s_A ALDH, betaine aldehyde 100.0 6E-59 2.1E-63 443.6 24.1 237 2-241 251-496 (503)
23 3r64_A NAD dependent benzaldeh 100.0 1.4E-58 4.9E-63 441.7 25.9 237 2-242 246-486 (508)
24 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.5E-58 5E-63 442.1 25.7 236 2-241 259-505 (515)
25 3pqa_A Lactaldehyde dehydrogen 100.0 8.3E-59 2.8E-63 440.7 23.6 228 8-241 235-464 (486)
26 3lns_A Benzaldehyde dehydrogen 100.0 6.7E-59 2.3E-63 439.0 22.8 232 2-240 224-456 (457)
27 1o04_A Aldehyde dehydrogenase, 100.0 4.8E-59 1.6E-63 443.8 21.3 237 2-241 255-495 (500)
28 3i44_A Aldehyde dehydrogenase; 100.0 1.7E-58 5.9E-63 439.6 24.9 232 2-238 258-495 (497)
29 4e4g_A Methylmalonate-semialde 100.0 6.5E-59 2.2E-63 444.6 22.0 238 2-241 258-505 (521)
30 3etf_A Putative succinate-semi 100.0 1.2E-58 4.2E-63 438.0 23.2 237 2-241 222-461 (462)
31 2ve5_A BADH, betaine aldehyde 100.0 2.9E-58 9.9E-63 438.3 25.7 237 2-241 239-483 (490)
32 2j6l_A Aldehyde dehydrogenase 100.0 1.5E-58 5E-63 440.8 22.4 237 2-240 257-498 (500)
33 4dng_A Uncharacterized aldehyd 100.0 1.3E-58 4.4E-63 440.2 21.7 236 2-241 241-478 (485)
34 2w8n_A Succinate-semialdehyde 100.0 1.4E-58 4.7E-63 439.8 21.1 236 2-240 246-485 (487)
35 1uzb_A 1-pyrroline-5-carboxyla 100.0 3.2E-58 1.1E-62 440.0 23.8 234 6-240 280-515 (516)
36 1uxt_A Glyceraldehyde-3-phosph 100.0 4.3E-58 1.5E-62 437.5 21.0 230 8-241 257-492 (501)
37 3ty7_A Putative aldehyde dehyd 100.0 9.2E-58 3.2E-62 433.6 22.3 233 2-238 236-474 (478)
38 4e3x_A Delta-1-pyrroline-5-car 100.0 2.1E-57 7.2E-62 437.0 24.5 249 2-252 296-561 (563)
39 1euh_A NADP dependent non phos 100.0 1E-57 3.6E-62 432.8 21.6 228 8-240 244-473 (475)
40 1t90_A MMSDH, probable methylm 100.0 5.5E-57 1.9E-61 428.8 21.9 237 2-241 237-480 (486)
41 2y53_A Aldehyde dehydrogenase 100.0 4E-56 1.4E-60 427.3 19.9 236 5-241 251-519 (534)
42 4f9i_A Proline dehydrogenase/d 100.0 1.6E-54 5.3E-59 438.6 23.3 235 6-241 773-1010(1026)
43 3ju8_A Succinylglutamic semial 100.0 9.2E-54 3.1E-58 407.0 21.5 231 2-241 235-471 (490)
44 3haz_A Proline dehydrogenase; 100.0 4.7E-53 1.6E-57 426.9 20.9 231 7-241 753-987 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 3.4E-51 1.2E-55 392.6 15.1 226 2-237 272-514 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 1.1E-49 3.7E-54 380.7 17.9 224 2-238 239-480 (510)
47 3k9d_A LMO1179 protein, aldehy 100.0 3.6E-47 1.2E-51 359.5 10.5 222 2-240 205-448 (464)
48 1vlu_A Gamma-glutamyl phosphat 100.0 6.4E-47 2.2E-51 357.6 8.7 210 8-255 231-449 (468)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 2.1E-45 7.2E-50 346.8 9.5 200 8-256 241-445 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 3.5E-44 1.2E-48 337.3 11.1 193 8-241 240-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 3.8E-44 1.3E-48 335.5 8.6 191 8-241 228-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 2.1E-43 7.3E-48 332.7 7.2 215 2-241 200-444 (452)
53 1kae_A HDH, histidinol dehydro 89.3 7.3 0.00025 35.6 13.2 78 150-236 306-391 (434)
54 2fiu_A Conserved hypothetical 67.0 16 0.00055 26.0 6.2 59 92-169 16-76 (99)
55 1s7i_A Hypothetical protein PA 61.4 28 0.00096 25.8 6.9 71 95-170 31-108 (124)
56 4gic_A HDH, histidinol dehydro 43.6 21 0.00073 32.4 4.2 78 150-236 313-398 (423)
57 3hhl_A RPA0582; alpha-beta-bar 38.1 66 0.0023 24.4 5.7 63 90-168 45-109 (143)
58 1mwq_A Hypothetical protein HI 33.1 1E+02 0.0034 21.4 5.7 22 148-169 62-83 (101)
59 3lo3_A Uncharacterized conserv 31.9 1.3E+02 0.0043 20.8 6.1 23 147-169 53-75 (94)
60 2ec4_A FAS-associated factor 1 29.3 20 0.00068 28.4 1.4 48 142-189 25-76 (178)
No 1
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=3.8e-64 Score=475.71 Aligned_cols=252 Identities=46% Similarity=0.830 Sum_probs=234.5
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++ |+|
T Consensus 214 ~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~ 291 (469)
T 3sza_A 214 TAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GED 291 (469)
T ss_dssp HHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSC
T ss_pred HHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCC
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999999999986 555
Q ss_pred -CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415 82 -LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 160 (282)
Q Consensus 82 -~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 160 (282)
++++++||++++.+++|+++++ +|+++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 292 ~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 367 (469)
T 3sza_A 292 AKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEA 367 (469)
T ss_dssp GGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHH
T ss_pred CcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHH
Confidence 5789999999999999999998 58899999987778999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415 161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240 (282)
Q Consensus 161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 240 (282)
|+++|+++|||+++|||+|.+++++++.++++|.|+||+...+...+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 368 i~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~ 447 (469)
T 3sza_A 368 IQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR 447 (469)
T ss_dssp HHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEEC
T ss_pred HHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEEC
Confidence 99999999999999999999999999999999999999987666678999999999999999999999999999999999
Q ss_pred CCCCC--CCCcCCCCchhHHH
Q 023415 241 GFIGD--VPVRYPPYTKGKLR 259 (282)
Q Consensus 241 ~~~~~--~~~~~~~~~~~~~~ 259 (282)
+++.. .+++||||+.++.+
T Consensus 448 ~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 448 PLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp CSSCCGGGGGGSSSCCC----
T ss_pred CcccccccccccCCCCccccc
Confidence 76544 57899999987654
No 2
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.6e-62 Score=461.91 Aligned_cols=236 Identities=25% Similarity=0.410 Sum_probs=224.7
Q ss_pred hhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC
Q 023415 3 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 82 (282)
Q Consensus 3 ~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~ 82 (282)
+|++++||++||||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.
T Consensus 241 ~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~ 319 (490)
T 2wme_A 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319 (490)
T ss_dssp HHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred hhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCc
Confidence 467789999999999999999999999999999999999 9999999999999999999999999999999999999996
Q ss_pred -CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415 83 -ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 155 (282)
Q Consensus 83 -~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~ 155 (282)
+++++||++++.+++++.++|++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (490)
T 2wme_A 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYD 399 (490)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeC
Confidence 6899999999999999999999986 578999999753 258999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415 156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235 (282)
Q Consensus 156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 235 (282)
|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus 400 ~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K 477 (490)
T 2wme_A 400 DEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477 (490)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred CHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhcee
Confidence 99999999999999999999999999999999999999999998643 4678999999999999999999999999999
Q ss_pred EEeEeC
Q 023415 236 AVLSRG 241 (282)
Q Consensus 236 ~v~~~~ 241 (282)
+|+++.
T Consensus 478 ~v~i~~ 483 (490)
T 2wme_A 478 SVQVEL 483 (490)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999875
No 3
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2.8e-60 Score=452.95 Aligned_cols=238 Identities=30% Similarity=0.486 Sum_probs=226.4
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 248 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 326 (503)
T 3iwj_A 248 TAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDP 326 (503)
T ss_dssp HHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC---CCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 156 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~ 156 (282)
. +++++||++++.+++++.+++++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 327 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 406 (503)
T 3iwj_A 327 LEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFST 406 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCC
Confidence 6 6899999999999999999999986 578999999764 4689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415 157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236 (282)
Q Consensus 157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 236 (282)
+||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 407 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~ 484 (503)
T 3iwj_A 407 EEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQ 484 (503)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEE
Confidence 9999999999999999999999999999999999999999998643 56789999999999999999999999999999
Q ss_pred EeEeCC
Q 023415 237 VLSRGF 242 (282)
Q Consensus 237 v~~~~~ 242 (282)
|+++..
T Consensus 485 v~~~~~ 490 (503)
T 3iwj_A 485 VTQYIS 490 (503)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 998753
No 4
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.7e-60 Score=452.12 Aligned_cols=239 Identities=23% Similarity=0.378 Sum_probs=227.1
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 219 ~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 297 (484)
T 3ros_A 219 EAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDP 297 (484)
T ss_dssp HHHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 5678999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 158 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 158 (282)
. +++++||++++.++++++++|++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 298 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 377 (484)
T 3ros_A 298 LEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDN 377 (484)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHH
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHH
Confidence 6 6899999999999999999999986 57899999975 3579999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415 159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238 (282)
Q Consensus 159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 238 (282)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 378 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~ 455 (484)
T 3ros_A 378 AAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVI 455 (484)
T ss_dssp HHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEE
T ss_pred HHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEE
Confidence 99999999999999999999999999999999999999999643 5688999999999999999999999999999999
Q ss_pred EeCCC
Q 023415 239 SRGFI 243 (282)
Q Consensus 239 ~~~~~ 243 (282)
++...
T Consensus 456 ~~~~~ 460 (484)
T 3ros_A 456 DVTKN 460 (484)
T ss_dssp ECGGG
T ss_pred ECCCC
Confidence 87643
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=7.2e-60 Score=449.78 Aligned_cols=237 Identities=24% Similarity=0.406 Sum_probs=225.0
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|
T Consensus 244 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 322 (506)
T 3rh9_A 244 VDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDG 322 (506)
T ss_dssp HHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCT
T ss_pred HHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
. +++++||++++.++++++++|++++ +|+++++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 323 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (506)
T 3rh9_A 323 MNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTE 402 (506)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCH
Confidence 5 6899999999999999999999996 57899999975 33 6899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|
T Consensus 403 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v 480 (506)
T 3rh9_A 403 EEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTV 480 (506)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEE
Confidence 999999999999999999999999999999999999999999865 357899999999999999999999999999999
Q ss_pred eEeC
Q 023415 238 LSRG 241 (282)
Q Consensus 238 ~~~~ 241 (282)
+++.
T Consensus 481 ~~~~ 484 (506)
T 3rh9_A 481 PRGF 484 (506)
T ss_dssp EEC-
T ss_pred EEcC
Confidence 8875
No 6
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.2e-59 Score=449.67 Aligned_cols=237 Identities=23% Similarity=0.434 Sum_probs=226.3
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 267 ~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p 345 (520)
T 3ed6_A 267 KNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNG 345 (520)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCT
T ss_pred HHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV 154 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~ 154 (282)
. +.+++||++++.++++++++|++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 346 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 425 (520)
T 3ed6_A 346 FDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGF 425 (520)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEe
Confidence 6 6899999999999999999999986 577999999764 46899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415 155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234 (282)
Q Consensus 155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~ 234 (282)
+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ .+.+||||+|.||+|+++|++++++|++.
T Consensus 426 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~ 503 (520)
T 3ed6_A 426 ETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVS 503 (520)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhce
Confidence 9999999999999999999999999999999999999999999998754 57899999999999999999999999999
Q ss_pred cEEeEeC
Q 023415 235 KAVLSRG 241 (282)
Q Consensus 235 k~v~~~~ 241 (282)
|+|+++.
T Consensus 504 k~v~~~~ 510 (520)
T 3ed6_A 504 KHILTNT 510 (520)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 9999875
No 7
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=6.5e-60 Score=448.35 Aligned_cols=236 Identities=24% Similarity=0.396 Sum_probs=224.0
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 245 ~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 323 (484)
T 3ifg_A 245 AQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG 323 (484)
T ss_dssp HHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 158 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 158 (282)
. +++++||++++.++++++++|++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 403 (484)
T 3ifg_A 324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEE 403 (484)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHH
Confidence 5 6899999999999999999999986 578999999764 369999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415 159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238 (282)
Q Consensus 159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 238 (282)
|||+++|+++|||+++|||+|.++++++++++++|.|+||+.. ...+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 404 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~ 481 (484)
T 3ifg_A 404 ELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGL--ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLC 481 (484)
T ss_dssp HHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC--CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999864 35688999999999999999999999999999987
Q ss_pred Ee
Q 023415 239 SR 240 (282)
Q Consensus 239 ~~ 240 (282)
+.
T Consensus 482 ~~ 483 (484)
T 3ifg_A 482 VA 483 (484)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 8
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.6e-60 Score=452.95 Aligned_cols=239 Identities=28% Similarity=0.455 Sum_probs=225.4
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 246 ~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 324 (517)
T 3r31_A 246 AAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDP 324 (517)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC----CCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 155 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~ 155 (282)
. +++++||++++.++++++++|++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (517)
T 3r31_A 325 LDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD 404 (517)
T ss_dssp TSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEEC
T ss_pred CCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeC
Confidence 6 6899999999999999999999986 578999999312 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415 156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235 (282)
Q Consensus 156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 235 (282)
|+||||+++|+++|||+++|||+|.++++++++++++|.|+||+... ..+.+||||+|.||+|+++|++++++|++.|
T Consensus 405 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 405 DEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp CHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred CHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999653 5688999999999999999999999999999
Q ss_pred EEeEeCCC
Q 023415 236 AVLSRGFI 243 (282)
Q Consensus 236 ~v~~~~~~ 243 (282)
+|+++...
T Consensus 483 ~v~~~~~~ 490 (517)
T 3r31_A 483 TVYVSTGK 490 (517)
T ss_dssp EEEECCC-
T ss_pred EEEEcCCC
Confidence 99987643
No 9
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=2.7e-59 Score=444.96 Aligned_cols=236 Identities=25% Similarity=0.414 Sum_probs=224.1
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 255 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 333 (495)
T 1wnd_A 255 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP 333 (495)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCT
T ss_pred HHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hc-CeEeeCCc-cCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VS-GKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~-~~~~~gg~-~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
. +++++||++++.++++++++|+++. +| +++++||. .++.|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 334 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (495)
T 1wnd_A 334 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413 (495)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCH
Confidence 6 5899999999999999999999986 46 79999997 5446899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v 491 (495)
T 1wnd_A 414 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491 (495)
T ss_dssp HHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEE
Confidence 999999999999999999999999999999999999999998653 458899999999999999999999999999998
Q ss_pred eEe
Q 023415 238 LSR 240 (282)
Q Consensus 238 ~~~ 240 (282)
+.+
T Consensus 492 ~~~ 494 (495)
T 1wnd_A 492 MVK 494 (495)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 10
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.6e-59 Score=445.13 Aligned_cols=247 Identities=24% Similarity=0.395 Sum_probs=231.1
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||++||||||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|++++.+++.|+|
T Consensus 220 ~~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 298 (474)
T 4h7n_A 220 ETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298 (474)
T ss_dssp HHHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCS
T ss_pred hhhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC--CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
. +++++||++++.++++++++++++. ++++++.||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 299 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~ 378 (474)
T 4h7n_A 299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDV 378 (474)
T ss_dssp SGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred cccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCH
Confidence 6 6889999999999999999999986 577888888753 36899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKA 236 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~ 236 (282)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+...+.+||||++.||+| +++|.+++++|++.|+
T Consensus 379 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~ 458 (474)
T 4h7n_A 379 EEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQA 458 (474)
T ss_dssp HHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEE
T ss_pred HHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEE
Confidence 999999999999999999999999999999999999999999887777789999999999998 7899999999999999
Q ss_pred EeEeCCCCCCCCc
Q 023415 237 VLSRGFIGDVPVR 249 (282)
Q Consensus 237 v~~~~~~~~~~~~ 249 (282)
|+++......|++
T Consensus 459 v~~~~~~~~~p~w 471 (474)
T 4h7n_A 459 FLIKTNSTSDPWW 471 (474)
T ss_dssp EEEECSSSCCTTS
T ss_pred EEECCCCCCCCCC
Confidence 9998754444444
No 11
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-59 Score=449.71 Aligned_cols=237 Identities=29% Similarity=0.452 Sum_probs=226.3
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 258 ~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 258 EIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 5678999999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC--CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
. +++++||++++.+++++.+++++++ +|+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 6 6899999999999999999999986 5789999997644 6999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|
T Consensus 417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v 494 (528)
T 3u4j_A 417 DEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494 (528)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999999764 468899999999999999999999999999999
Q ss_pred eEeC
Q 023415 238 LSRG 241 (282)
Q Consensus 238 ~~~~ 241 (282)
+++.
T Consensus 495 ~~~~ 498 (528)
T 3u4j_A 495 HVTL 498 (528)
T ss_dssp EEES
T ss_pred EEeC
Confidence 9875
No 12
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.1e-59 Score=448.04 Aligned_cols=236 Identities=20% Similarity=0.361 Sum_probs=224.9
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 257 ~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (498)
T 4f3x_A 257 AAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD 335 (498)
T ss_dssp HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCS
T ss_pred HHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcC-eEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~-~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
. +++++||++++.++++++++|++++ +|+ ++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 336 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 415 (498)
T 4f3x_A 336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGK 415 (498)
T ss_dssp SGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTT
T ss_pred ccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCH
Confidence 5 6899999999999999999999986 577 99999975 347999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 416 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v 493 (498)
T 4f3x_A 416 DDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493 (498)
T ss_dssp SCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999998764 48899999999999999999999999999999
Q ss_pred eEe
Q 023415 238 LSR 240 (282)
Q Consensus 238 ~~~ 240 (282)
++.
T Consensus 494 ~~~ 496 (498)
T 4f3x_A 494 MIN 496 (498)
T ss_dssp EEE
T ss_pred EEe
Confidence 875
No 13
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=2.2e-59 Score=446.25 Aligned_cols=238 Identities=25% Similarity=0.455 Sum_probs=224.5
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 245 ~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc--C-C--CCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER--D-K--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV 154 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~--~-~--~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~ 154 (282)
. +++++||++++.+++++++++++++ +|+++++||.. . . .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 6 6899999999999999999999986 68899999973 2 2 6899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415 155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234 (282)
Q Consensus 155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~ 234 (282)
+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ .+.+||||+|.||+|+++|++++++|++.
T Consensus 404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~ 481 (497)
T 3k2w_A 404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEK 481 (497)
T ss_dssp SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcce
Confidence 9999999999999999999999999999999999999999999998764 48899999999999999999999999999
Q ss_pred cEEeEeCC
Q 023415 235 KAVLSRGF 242 (282)
Q Consensus 235 k~v~~~~~ 242 (282)
|+|+++..
T Consensus 482 k~v~~~~~ 489 (497)
T 3k2w_A 482 KTVYINEA 489 (497)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 99998753
No 14
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=5.6e-59 Score=441.94 Aligned_cols=236 Identities=25% Similarity=0.457 Sum_probs=224.1
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 317 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 317 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCc
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C--CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 82 L--ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 82 ~--~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
. +++++||++++.+++|+++++++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~ 397 (479)
T 2imp_A 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397 (479)
T ss_dssp TTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred cccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence 5 5899999999999999999999986 57899999975 335899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ .+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 398 ~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v 475 (479)
T 2imp_A 398 EDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475 (479)
T ss_dssp HHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEE
Confidence 9999999999999999999999999999999999999999997654 57899999999999999999999999999999
Q ss_pred eEe
Q 023415 238 LSR 240 (282)
Q Consensus 238 ~~~ 240 (282)
+.+
T Consensus 476 ~~~ 478 (479)
T 2imp_A 476 YLQ 478 (479)
T ss_dssp EEE
T ss_pred Eec
Confidence 865
No 15
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=5.6e-59 Score=442.11 Aligned_cols=236 Identities=24% Similarity=0.431 Sum_probs=224.5
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus 242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 320 (481)
T 3jz4_A 242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDG 320 (481)
T ss_dssp HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCT
T ss_pred HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 158 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 158 (282)
. +++++||++++.+++++++++++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 321 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 400 (481)
T 3jz4_A 321 LDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEA 400 (481)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred ccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHH
Confidence 5 6899999999999999999999986 57899999976 4468999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415 159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238 (282)
Q Consensus 159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 238 (282)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 401 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~ 478 (481)
T 3jz4_A 401 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMC 478 (481)
T ss_dssp HHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEE
Confidence 99999999999999999999999999999999999999999764 4678999999999999999999999999999998
Q ss_pred Ee
Q 023415 239 SR 240 (282)
Q Consensus 239 ~~ 240 (282)
+.
T Consensus 479 ~~ 480 (481)
T 3jz4_A 479 IG 480 (481)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 16
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.2e-59 Score=448.03 Aligned_cols=236 Identities=25% Similarity=0.431 Sum_probs=224.6
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus 265 ~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 265 AQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 159 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 159 (282)
. +++++||++++.++++++++|++++ +|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 422 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEE 422 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHH
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHH
Confidence 5 6899999999999999999999986 57899999975 3689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415 160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 239 (282)
Q Consensus 160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 239 (282)
||+++|+++|||+++|||+|.++++++++++++|.|+||+... ..+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 423 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 500 (504)
T 3ek1_A 423 VIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICS 500 (504)
T ss_dssp HHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEE
T ss_pred HHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999998653 56789999999999999999999999999999987
Q ss_pred eC
Q 023415 240 RG 241 (282)
Q Consensus 240 ~~ 241 (282)
..
T Consensus 501 ~~ 502 (504)
T 3ek1_A 501 AY 502 (504)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 17
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2.7e-59 Score=448.84 Aligned_cols=239 Identities=25% Similarity=0.421 Sum_probs=224.8
Q ss_pred hhhhhc------CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh
Q 023415 2 AAAAKH------LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN 75 (282)
Q Consensus 2 ~~aa~~------~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 75 (282)
++|+++ +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++
T Consensus 269 ~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 347 (538)
T 3qan_A 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKN 347 (538)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTT
T ss_pred HHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHh
Confidence 456677 9999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ccCCCCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415 76 FYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 153 (282)
Q Consensus 76 ~~~g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~ 153 (282)
+++|+|. +++++||++++.+++++.++|+++++.+++++||..++ .|+|++|||+.+++++|++++||+||||++|++
T Consensus 348 ~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 427 (538)
T 3qan_A 348 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427 (538)
T ss_dssp CCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred ccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEE
Confidence 9999996 68999999999999999999999875449999998654 699999999999999999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhh
Q 023415 154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFS 232 (282)
Q Consensus 154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~ 232 (282)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+..++...+.+||||+|.||+| +++|++++++|+
T Consensus 428 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft 507 (538)
T 3qan_A 428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHM 507 (538)
T ss_dssp ESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhh
Confidence 9999999999999999999999999999999999999999999995444444789999999999999 999999999999
Q ss_pred hccEEeEeC
Q 023415 233 HKKAVLSRG 241 (282)
Q Consensus 233 ~~k~v~~~~ 241 (282)
+.|+|+++.
T Consensus 508 ~~k~v~~~~ 516 (538)
T 3qan_A 508 QAKTVSEMY 516 (538)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEec
Confidence 999999875
No 18
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-59 Score=445.44 Aligned_cols=235 Identities=28% Similarity=0.441 Sum_probs=223.9
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 320 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPP 320 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCT
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC---CCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 156 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~ 156 (282)
. +++++||++++.+++|+++++++++ +|+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 321 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (495)
T 3b4w_A 321 SDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDT 400 (495)
T ss_dssp TCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCC
Confidence 5 6899999999999999999999986 5789999997643 589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415 157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236 (282)
Q Consensus 157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 236 (282)
+||||+++|+++|||+++|||+|.+++++++.++++|.|+||++. ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 401 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~ 477 (495)
T 3b4w_A 401 EEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKS 477 (495)
T ss_dssp HHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred HHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeE
Confidence 999999999999999999999999999999999999999999864 45789999999999999999999999999999
Q ss_pred EeEe
Q 023415 237 VLSR 240 (282)
Q Consensus 237 v~~~ 240 (282)
|+.+
T Consensus 478 v~~~ 481 (495)
T 3b4w_A 478 VLLP 481 (495)
T ss_dssp EECC
T ss_pred EEEc
Confidence 9875
No 19
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.9e-59 Score=445.78 Aligned_cols=230 Identities=26% Similarity=0.449 Sum_probs=220.9
Q ss_pred CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL 87 (282)
Q Consensus 8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~ 87 (282)
+||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 253 l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 331 (505)
T 3prl_A 253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADI 331 (505)
T ss_dssp SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSB
T ss_pred CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcC
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999998888899
Q ss_pred cccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhc
Q 023415 88 SRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 166 (282)
Q Consensus 88 gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~ 166 (282)
||++++.+++++++++++++ +|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 332 gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~ 409 (505)
T 3prl_A 332 TPVIDEKSAAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQ 409 (505)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999986 57899999974 6899999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415 167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 241 (282)
Q Consensus 167 ~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 241 (282)
++|||+++|||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 410 ~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 410 SDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp SSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 9999999999999999999999999999999998653 4688999999999999999999999999999998875
No 20
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.5e-59 Score=446.11 Aligned_cols=236 Identities=24% Similarity=0.388 Sum_probs=224.0
Q ss_pred hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415 2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 80 (282)
Q Consensus 2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~ 80 (282)
++|+ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 275 ~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGd 353 (517)
T 2o2p_A 275 KSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGN 353 (517)
T ss_dssp HHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred HHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 4567 899999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCC-
Q 023415 81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK- 156 (282)
Q Consensus 81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~- 156 (282)
|. +++++||++++.++++++++|++++ +|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 354 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 354 PLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 95 6899999999999999999999986 5789999997643 689999999999999999999999999999999999
Q ss_pred -HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415 157 -IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235 (282)
Q Consensus 157 -~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 235 (282)
+||||+++|+++|||+++|||+|.+++++++.++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k 511 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCce
Confidence 9999999999999999999999999999999999999999998753 4578999999999999999999999999999
Q ss_pred EEeEe
Q 023415 236 AVLSR 240 (282)
Q Consensus 236 ~v~~~ 240 (282)
+|+++
T Consensus 512 ~v~~~ 516 (517)
T 2o2p_A 512 TVTFE 516 (517)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 99864
No 21
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=5.9e-59 Score=443.24 Aligned_cols=237 Identities=26% Similarity=0.419 Sum_probs=224.3
Q ss_pred hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415 2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 80 (282)
Q Consensus 2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~ 80 (282)
++|+ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 256 ~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (501)
T 1bxs_A 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 334 (501)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred HHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCC
Confidence 4567 899999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
|. +++++||++++.+++|++++|++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 335 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 96 6899999999999999999999986 578999999763 36899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v 492 (501)
T 1bxs_A 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492 (501)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEE
Confidence 999999999999999999999999999999999999999998754 457899999999999999999999999999999
Q ss_pred eEeC
Q 023415 238 LSRG 241 (282)
Q Consensus 238 ~~~~ 241 (282)
+.+.
T Consensus 493 ~~~~ 496 (501)
T 1bxs_A 493 TIKI 496 (501)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 8763
No 22
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=6e-59 Score=443.60 Aligned_cols=237 Identities=27% Similarity=0.465 Sum_probs=225.0
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 251 ~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 329 (503)
T 1a4s_A 251 EMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329 (503)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-------CCCceecceEEeeCCCCCcccccccccceeeEE
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL 152 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~ 152 (282)
. +++++||++++.+++|+++++++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 330 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 409 (503)
T 1a4s_A 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEE
Confidence 6 6899999999999999999999986 578999999764 358999999999999999999999999999999
Q ss_pred eeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 023415 153 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232 (282)
Q Consensus 153 ~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~ 232 (282)
+|+|+||||+++|+++|||+++|||+|.+++++++.++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++|+
T Consensus 410 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~ 487 (503)
T 1a4s_A 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYS 487 (503)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSE
T ss_pred ecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999764 4578999999999999999999999999
Q ss_pred hccEEeEeC
Q 023415 233 HKKAVLSRG 241 (282)
Q Consensus 233 ~~k~v~~~~ 241 (282)
+.|+|+.+.
T Consensus 488 ~~k~v~~~~ 496 (503)
T 1a4s_A 488 QLKTVIVEM 496 (503)
T ss_dssp EEEEEEECC
T ss_pred CceEEEEcc
Confidence 999998763
No 23
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.4e-58 Score=441.65 Aligned_cols=237 Identities=24% Similarity=0.434 Sum_probs=208.1
Q ss_pred hhhhh--cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCC
Q 023415 2 AAAAK--HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 79 (282)
Q Consensus 2 ~~aa~--~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g 79 (282)
++|++ ++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|
T Consensus 246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 324 (508)
T 3r64_A 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG 324 (508)
T ss_dssp HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 45666 89999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 80 NPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 80 ~~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
+|. +++++||++++.+++++++++++++ +|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (508)
T 3r64_A 325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDE 402 (508)
T ss_dssp CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCH
Confidence 986 6899999999999999999999997 57899999975 6899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|+++|++++++|++.|+|
T Consensus 403 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v 481 (508)
T 3r64_A 403 AHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481 (508)
T ss_dssp HHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999998754 468899999999999999999999999999999
Q ss_pred eEeCC
Q 023415 238 LSRGF 242 (282)
Q Consensus 238 ~~~~~ 242 (282)
+++..
T Consensus 482 ~~~~~ 486 (508)
T 3r64_A 482 GIKRS 486 (508)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 98763
No 24
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-58 Score=442.10 Aligned_cols=236 Identities=25% Similarity=0.429 Sum_probs=224.1
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 337 (515)
T 2d4e_A 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP 337 (515)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCc
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC---------CCceecceEEeeCCCCCcccccccccceee
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLP 150 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~---------~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~ 150 (282)
. +++++||++++.++++++++|++++ +|+++++||..+. .|+|++|||+.+ +++|++++||+||||++
T Consensus 338 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~ 416 (515)
T 2d4e_A 338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLV 416 (515)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEE
T ss_pred ccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceE
Confidence 6 5799999999999999999999986 5789999997643 589999999999 99999999999999999
Q ss_pred EEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHH
Q 023415 151 ILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV 230 (282)
Q Consensus 151 v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~ 230 (282)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++
T Consensus 417 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ 494 (515)
T 2d4e_A 417 AIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDF 494 (515)
T ss_dssp EEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHH
T ss_pred EEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999998754 56789999999999999999999999
Q ss_pred hhhccEEeEeC
Q 023415 231 FSHKKAVLSRG 241 (282)
Q Consensus 231 ~~~~k~v~~~~ 241 (282)
|++.|+|+.+.
T Consensus 495 ~~~~K~v~~~~ 505 (515)
T 2d4e_A 495 YTDLKTIALPL 505 (515)
T ss_dssp HEEEEEEEEES
T ss_pred hCceeEEEEcC
Confidence 99999998874
No 25
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=8.3e-59 Score=440.75 Aligned_cols=228 Identities=32% Similarity=0.574 Sum_probs=218.2
Q ss_pred CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCCc
Q 023415 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKD 86 (282)
Q Consensus 8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~ 86 (282)
+||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. ++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 313 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTD 313 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCC
Confidence 9999999999999999999999999999999999 9999999999999999999999999999999999999995 6899
Q ss_pred ccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHh
Q 023415 87 LSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN 165 (282)
Q Consensus 87 ~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n 165 (282)
+||++++.++++++++++++. +|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|
T Consensus 314 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN 389 (486)
T 3pqa_A 314 VGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIAN 389 (486)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHh
Confidence 999999999999999999986 57899999975 5899999999 9999999999999999999999999 99999999
Q ss_pred cCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415 166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 241 (282)
Q Consensus 166 ~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 241 (282)
+++|||+++|||+|.++++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 390 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 390 STEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp CSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999999998654 3458999999999999999999999999999999875
No 26
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=6.7e-59 Score=439.04 Aligned_cols=232 Identities=35% Similarity=0.643 Sum_probs=220.1
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++ |
T Consensus 224 ~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p 299 (457)
T 3lns_A 224 QAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---P 299 (457)
T ss_dssp HHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---C
T ss_pred HHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---C
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999999999987 5
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415 82 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 161 (282)
Q Consensus 82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 161 (282)
.+. ++||++++.+++|+++++++++ +++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 300 ~~~-~~gpli~~~~~~rv~~~i~~a~--~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 376 (457)
T 3lns_A 300 EIN-STGKLVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAI 376 (457)
T ss_dssp STT-TTCCCSSHHHHHHHHHHHHHCC--SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHH
T ss_pred Ccc-cccCCCCHHHHHHHHHHHHhcC--CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHH
Confidence 545 9999999999999999999763 6999999876679999999999999999999999999999999999999999
Q ss_pred HHHhc-CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415 162 DIINS-GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240 (282)
Q Consensus 162 ~~~n~-~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 240 (282)
+++|+ ++|||+++|||+|.++++++++++++|.|+||++..+...+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus 377 ~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 377 DQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999 99999999999999999999999999999999987665678999999999999999999999999999999865
No 27
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=4.8e-59 Score=443.78 Aligned_cols=237 Identities=27% Similarity=0.399 Sum_probs=224.5
Q ss_pred hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415 2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 80 (282)
Q Consensus 2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~ 80 (282)
++|+ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 333 (500)
T 1o04_A 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333 (500)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCC
Confidence 4577 899999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
|. +++++||++++.+++|++++|++++ +|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 334 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 96 6899999999999999999999986 578999999764 35899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v 491 (500)
T 1o04_A 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491 (500)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEE
Confidence 999999999999999999999999999999999999999998754 457899999999999999999999999999999
Q ss_pred eEeC
Q 023415 238 LSRG 241 (282)
Q Consensus 238 ~~~~ 241 (282)
+.+.
T Consensus 492 ~~~~ 495 (500)
T 1o04_A 492 TVKV 495 (500)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8763
No 28
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.7e-58 Score=439.65 Aligned_cols=232 Identities=23% Similarity=0.367 Sum_probs=219.6
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++||| +.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 258 ~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (497)
T 3i44_A 258 KNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG 335 (497)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 567889999999999999999999999 999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCc-cCC---CCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGE-RDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 155 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~-~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~ 155 (282)
. +++++||++++.++++++++|++++ +|+++++||. ... .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp TSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 6 6899999999999999999999986 5789999994 322 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415 156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235 (282)
Q Consensus 156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 235 (282)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||. . ...+.+||||+|.||+|+++|.+++++|++.|
T Consensus 416 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K 492 (497)
T 3i44_A 416 TEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTK 492 (497)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhccee
Confidence 99999999999999999999999999999999999999999995 2 34578999999999999999999999999999
Q ss_pred EEe
Q 023415 236 AVL 238 (282)
Q Consensus 236 ~v~ 238 (282)
+|+
T Consensus 493 ~v~ 495 (497)
T 3i44_A 493 AIS 495 (497)
T ss_dssp EES
T ss_pred EEE
Confidence 976
No 29
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.5e-59 Score=444.64 Aligned_cols=238 Identities=21% Similarity=0.307 Sum_probs=224.7
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhhccCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKN 80 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~ 80 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++ ++|+|+++|+++++++++|+
T Consensus 258 ~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~ 336 (521)
T 4e4g_A 258 GTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP 336 (521)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCC
T ss_pred HHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999 99999999999999999999
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-----CCCCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415 81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 153 (282)
Q Consensus 81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-----~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~ 153 (282)
|. +++++||++++.++++++++|++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++
T Consensus 337 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 416 (521)
T 4e4g_A 337 YTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVR 416 (521)
T ss_dssp TTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECC
T ss_pred CCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEE
Confidence 85 6899999999999999999999986 57899999964 24689999999999999999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC--CcchHHHHHHh
Q 023415 154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVF 231 (282)
Q Consensus 154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~ 231 (282)
|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ...+.+||||+|.||+| +++|++++++|
T Consensus 417 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~f 495 (521)
T 4e4g_A 417 ARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFW 495 (521)
T ss_dssp BSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHT
T ss_pred eCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999753 34578999999999999 78999999999
Q ss_pred hhccEEeEeC
Q 023415 232 SHKKAVLSRG 241 (282)
Q Consensus 232 ~~~k~v~~~~ 241 (282)
++.|+|+++.
T Consensus 496 t~~K~v~~~~ 505 (521)
T 4e4g_A 496 TRTKTITSRW 505 (521)
T ss_dssp EEEEEEEECC
T ss_pred heEEEEEEec
Confidence 9999999864
No 30
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.2e-58 Score=438.02 Aligned_cols=237 Identities=24% Similarity=0.439 Sum_probs=225.3
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 222 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 300 (462)
T 3etf_A 222 AQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDP 300 (462)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 158 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 158 (282)
. +.+++||++++.++++++++++++. +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 301 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~d 380 (462)
T 3etf_A 301 LVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAA 380 (462)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred ccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHH
Confidence 5 6889999999999999999999986 57899999874 3578999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415 159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238 (282)
Q Consensus 159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 238 (282)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 381 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~ 458 (462)
T 3etf_A 381 HALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458 (462)
T ss_dssp HHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEE
Confidence 99999999999999999999999999999999999999999764 4688999999999999999999999999999998
Q ss_pred EeC
Q 023415 239 SRG 241 (282)
Q Consensus 239 ~~~ 241 (282)
++.
T Consensus 459 ~~r 461 (462)
T 3etf_A 459 KNR 461 (462)
T ss_dssp ECC
T ss_pred Eec
Confidence 764
No 31
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.9e-58 Score=438.28 Aligned_cols=237 Identities=25% Similarity=0.412 Sum_probs=224.7
Q ss_pred hhh-hhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415 2 AAA-AKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 80 (282)
Q Consensus 2 ~~a-a~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~ 80 (282)
++| ++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 239 ~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 456 8899999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415 81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 153 (282)
Q Consensus 81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~ 153 (282)
|. +++++||++++.+++++.++++++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 318 p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~ 397 (490)
T 2ve5_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEE
Confidence 85 6889999999999999999999986 578999999762 3589999999999999999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhh
Q 023415 154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233 (282)
Q Consensus 154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~ 233 (282)
|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 398 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~pfGG~k~SG~G~~~G~~~~~~f~~ 475 (490)
T 2ve5_A 398 YDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTR 475 (490)
T ss_dssp ESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCCCCCCCCCcchHHHHHHhhe
Confidence 9999999999999999999999999999999999999999999999754 45889999999999999999999999999
Q ss_pred ccEEeEeC
Q 023415 234 KKAVLSRG 241 (282)
Q Consensus 234 ~k~v~~~~ 241 (282)
.|+|+++.
T Consensus 476 ~k~v~~~~ 483 (490)
T 2ve5_A 476 IKSVQVEL 483 (490)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEcc
Confidence 99998864
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.5e-58 Score=440.83 Aligned_cols=237 Identities=18% Similarity=0.300 Sum_probs=223.3
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus 257 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (500)
T 2j6l_A 257 LMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335 (500)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCc
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 158 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 158 (282)
. +++++||++++.+++|+++++++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 336 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (500)
T 2j6l_A 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEE 415 (500)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHH
T ss_pred ccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHH
Confidence 6 5899999999999999999999986 57899999976 3468999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHH--hhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415 159 DSFDIINSGTKPLAAYLFTNNKKLKQQFV--ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236 (282)
Q Consensus 159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 236 (282)
|||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ...+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~ 494 (500)
T 2j6l_A 416 EVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTS-GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494 (500)
T ss_dssp HHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTT-CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEE
T ss_pred HHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCc-cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEE
Confidence 99999999999999999999999999999 679999999998654 245689999999999999999999999999999
Q ss_pred EeEe
Q 023415 237 VLSR 240 (282)
Q Consensus 237 v~~~ 240 (282)
|+++
T Consensus 495 v~~~ 498 (500)
T 2j6l_A 495 CTIN 498 (500)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9875
No 33
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-58 Score=440.21 Aligned_cols=236 Identities=20% Similarity=0.390 Sum_probs=202.0
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus 241 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 241 EIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999998
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 159 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 159 (282)
. +++++||++++.+++++++++++++ +|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 397 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQE 397 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHH
Confidence 6 6899999999999999999999986 57899999975 689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415 160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 239 (282)
Q Consensus 160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 239 (282)
||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 398 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~ 476 (485)
T 4dng_A 398 AIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISI 476 (485)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEE
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999998754 56889999999999999999999999999999988
Q ss_pred eC
Q 023415 240 RG 241 (282)
Q Consensus 240 ~~ 241 (282)
+.
T Consensus 477 ~~ 478 (485)
T 4dng_A 477 QK 478 (485)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 34
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.4e-58 Score=439.76 Aligned_cols=236 Identities=25% Similarity=0.460 Sum_probs=224.2
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh-ccCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKN 80 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~ 80 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++ ++.|+
T Consensus 246 ~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~ 324 (487)
T 2w8n_A 246 HHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGN 324 (487)
T ss_dssp HHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCC
Confidence 5678899999999999999999999999999999999999 999999999999999999999999999999999 99999
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCc-eecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415 81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKL-RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 157 (282)
Q Consensus 81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~-~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~ 157 (282)
|. +++++||++++.+++++++++++++ +|+++++||..++.|+ |++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 404 (487)
T 2w8n_A 325 GFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTE 404 (487)
T ss_dssp TTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCH
T ss_pred cccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCH
Confidence 85 6899999999999999999999986 5779999998655688 9999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415 158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237 (282)
Q Consensus 158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 237 (282)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ .+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 405 ~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v 482 (487)
T 2w8n_A 405 EEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482 (487)
T ss_dssp HHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEE
Confidence 9999999999999999999999999999999999999999997654 46799999999999999999999999999999
Q ss_pred eEe
Q 023415 238 LSR 240 (282)
Q Consensus 238 ~~~ 240 (282)
+.+
T Consensus 483 ~~~ 485 (487)
T 2w8n_A 483 CYG 485 (487)
T ss_dssp EEC
T ss_pred EEe
Confidence 865
No 35
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=3.2e-58 Score=440.03 Aligned_cols=234 Identities=24% Similarity=0.409 Sum_probs=221.4
Q ss_pred hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 023415 6 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK 85 (282)
Q Consensus 6 ~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 85 (282)
+++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 280 ~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 358 (516)
T 1uzb_A 280 TWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENP 358 (516)
T ss_dssp CSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCC
T ss_pred cccceeEEecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCcccc
Confidence 789999999999999999999999999999999999 9999999999999999999999999999999999999996689
Q ss_pred cccccCCHHHHHHHHHHHHHHHhcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415 86 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII 164 (282)
Q Consensus 86 ~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 164 (282)
++||++++.++++++++|+++++.+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 359 ~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a 438 (516)
T 1uzb_A 359 DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVA 438 (516)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHH
Confidence 999999999999999999998765589999976 3468999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEeEe
Q 023415 165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR 240 (282)
Q Consensus 165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v~~~ 240 (282)
|+++|||+++|||+|.++++++++++++|.|+||++..+...+.+||||+|.||+|+ ++|.+++++|++.|+|+++
T Consensus 439 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 439 NDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred hcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999999999999999999999999999997666566789999999999995 7899999999999998764
No 36
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=4.3e-58 Score=437.49 Aligned_cols=230 Identities=20% Similarity=0.384 Sum_probs=219.9
Q ss_pred CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCCc
Q 023415 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKD 86 (282)
Q Consensus 8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~ 86 (282)
+||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|. ++++
T Consensus 257 l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 335 (501)
T 1uxt_A 257 VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVD 335 (501)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCc
Confidence 9999999999999999999999999999999999 9999999999999999999999999999999999999996 6899
Q ss_pred ccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCC-ceecceEEeeCC---CCCcccccccccceeeEEeeCCHHHHH
Q 023415 87 LSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNK-LRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSF 161 (282)
Q Consensus 87 ~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g-~~~~Ptv~~~~~---~~~~i~~~E~fgPvl~v~~~~~~~eai 161 (282)
+||++++.++++++++++++. +|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||
T Consensus 336 ~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi 413 (501)
T 1uxt_A 336 VGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAI 413 (501)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHH
Confidence 999999999999999999986 46799999975 58 999999999999 999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415 162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 241 (282)
Q Consensus 162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 241 (282)
+++|+++|||+++|||+|.++++++++++++|.|+||+++ +...+.+||||+|.||+|+++|.+++++|++.|+|+.+.
T Consensus 414 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 414 ELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp HHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred HHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 9999999999999999999999999999999999999874 335688999999999999999999999999999998874
No 37
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=9.2e-58 Score=433.58 Aligned_cols=233 Identities=26% Similarity=0.487 Sum_probs=200.5
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 236 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 314 (478)
T 3ty7_A 236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP 314 (478)
T ss_dssp CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-C---CCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415 82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 155 (282)
Q Consensus 82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~ 155 (282)
. +++++||++++.++++++++++++. +|+++++||.. . ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 6 6899999999999999999999986 68899999842 2 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415 156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235 (282)
Q Consensus 156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 235 (282)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ . ...+.+||||+|.||+|+++|++++++||+.|
T Consensus 395 ~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k 471 (478)
T 3ty7_A 395 DLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVK 471 (478)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-C--C----------------------CCGGGEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcCeE
Confidence 99999999999999999999999999999999999999999999 3 24578999999999999999999999999999
Q ss_pred EEe
Q 023415 236 AVL 238 (282)
Q Consensus 236 ~v~ 238 (282)
+|+
T Consensus 472 ~v~ 474 (478)
T 3ty7_A 472 SIA 474 (478)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 38
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.1e-57 Score=436.97 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=229.5
Q ss_pred hhhhhcCCc------EEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh
Q 023415 2 AAAAKHLTP------VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN 75 (282)
Q Consensus 2 ~~aa~~~~~------~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 75 (282)
++|++++|| +++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++
T Consensus 296 ~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~ 374 (563)
T 4e3x_A 296 RQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR 374 (563)
T ss_dssp HHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred HHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence 467788885 9999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ccCCCC-C-CCCcccccCCHHHHHHHHHHHHHHH--hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceee
Q 023415 76 FYGKNP-L-ESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLP 150 (282)
Q Consensus 76 ~~~g~~-~-~~~~~gpli~~~~~~~i~~~i~~a~--~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~ 150 (282)
+++|+| . +++++||++++.+++++.++|++++ .++++++||..+ ..|+|++|||+.+++++|++++||+||||++
T Consensus 375 l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~ 454 (563)
T 4e3x_A 375 IKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLT 454 (563)
T ss_dssp CCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEE
T ss_pred ccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEE
Confidence 999998 5 6899999999999999999999997 467999999764 3689999999999999999999999999999
Q ss_pred EEeeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--cceEEECCCCcccCCCCCCcccCCCCCCC-Ccch
Q 023415 151 ILTVDK--IEDSFDII-NSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHG 224 (282)
Q Consensus 151 v~~~~~--~~eai~~~-n~~~~gL~a~i~t~d~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g 224 (282)
|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+||+.+++...+.+||||+|.||+| +.+|
T Consensus 455 V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G 534 (563)
T 4e3x_A 455 VYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 534 (563)
T ss_dssp EEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTS
T ss_pred EEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCC
Confidence 999996 79999999 789999999999999999999999975 99999999876666788999999999998 8899
Q ss_pred HHHHHHhhhccEEeEeCCCCCCCCcCCC
Q 023415 225 KFSFDVFSHKKAVLSRGFIGDVPVRYPP 252 (282)
Q Consensus 225 ~~~l~~~~~~k~v~~~~~~~~~~~~~~~ 252 (282)
++++++|++.|+|..+ +..+.+++||.
T Consensus 535 ~~~l~~~~~~k~v~~~-~~~~~~~~yp~ 561 (563)
T 4e3x_A 535 PHYILRWTSPQVIKET-HKPLGDWRYSY 561 (563)
T ss_dssp TTGGGGGBCCEEEEEE-CSCCCCSSCTT
T ss_pred HHHHHHhCceEEEEEe-CcCCCcccCCC
Confidence 9999999999999876 44455666764
No 39
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1e-57 Score=432.77 Aligned_cols=228 Identities=26% Similarity=0.460 Sum_probs=218.4
Q ss_pred CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL 87 (282)
Q Consensus 8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~ 87 (282)
+||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|.+++++
T Consensus 244 ~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 322 (475)
T 1euh_A 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADI 322 (475)
T ss_dssp TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSB
T ss_pred CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCcc
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999668999
Q ss_pred cccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhc
Q 023415 88 SRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 166 (282)
Q Consensus 88 gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~ 166 (282)
||++++.+++++++++++++ +|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 323 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~ 400 (475)
T 1euh_A 323 TPLIDTKSADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNK 400 (475)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhC
Confidence 99999999999999999986 57799999875 5899999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEecCCHHHHHHHHhhcccceEEECC-CCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415 167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240 (282)
Q Consensus 167 ~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 240 (282)
++|||+++|||+|.++++++++++++|.|+||+ +..+ .+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 401 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 401 SEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp SSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999999999999999998 5543 57899999999999999999999999999999875
No 40
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5.5e-57 Score=428.77 Aligned_cols=237 Identities=22% Similarity=0.357 Sum_probs=222.6
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCe-EEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLLESLKNELENFYGKN 80 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~g~ 80 (282)
++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++| ||||++ +|+|+++|+++++++++|+
T Consensus 237 ~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~ 314 (486)
T 1t90_A 237 KKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGN 314 (486)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSC
T ss_pred HHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCC
Confidence 4678899999999999999999999999999999999999 999999999999 999999 9999999999999999998
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC--CCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415 81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 156 (282)
Q Consensus 81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~ 156 (282)
|. +++++||++++.++++++++++++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 315 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~ 394 (486)
T 1t90_A 315 GLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKN 394 (486)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCC
Confidence 85 6899999999999999999999986 578999998742 3589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC--CcchHHHHHHhhhc
Q 023415 157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHK 234 (282)
Q Consensus 157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~ 234 (282)
+||||+++|+++|||+++|||+|.++++++++++++|.|+||++. +...+.+||||+|.||+| +++|++++++|++.
T Consensus 395 ~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~ 473 (486)
T 1t90_A 395 LKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRK 473 (486)
T ss_dssp HHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEE
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhce
Confidence 999999999999999999999999999999999999999999854 334578999999999999 89999999999999
Q ss_pred cEEeEeC
Q 023415 235 KAVLSRG 241 (282)
Q Consensus 235 k~v~~~~ 241 (282)
|+|+.+.
T Consensus 474 k~v~~~~ 480 (486)
T 1t90_A 474 KVVTARY 480 (486)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998764
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=4e-56 Score=427.30 Aligned_cols=236 Identities=14% Similarity=0.237 Sum_probs=219.1
Q ss_pred hhcCCcEEEeCCCCCceEEcCCC-----CHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCC
Q 023415 5 AKHLTPVLLELGGKSPVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 79 (282)
Q Consensus 5 a~~~~~~~lElgG~np~iV~~dA-----Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g 79 (282)
++++||+++|||||||+||++|| |++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 251 a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG 329 (534)
T 2y53_A 251 VQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 329 (534)
T ss_dssp HTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBB
T ss_pred hcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCC
Confidence 48999999999999999999999 99999999999999 9999999999999999999999999999999999999
Q ss_pred CCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccC-------CCCceecceEEeeCCCC--Cccccccccccee
Q 023415 80 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLL 149 (282)
Q Consensus 80 ~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~--~~i~~~E~fgPvl 149 (282)
+|. +++++||++++.++++++++|+++.+++++++||... ..|+|++|||+.+++++ |++++||+||||+
T Consensus 330 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl 409 (534)
T 2y53_A 330 NPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVA 409 (534)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEE
T ss_pred CCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEE
Confidence 996 6899999999999999999999987788999998642 35899999999999877 6899999999999
Q ss_pred eEEeeC---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ccceEEECCCCcc-------cCCCCCCcc
Q 023415 150 PILTVD---KI-----EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVH-------LAVHSLPFG 212 (282)
Q Consensus 150 ~v~~~~---~~-----~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l--~~g~v~iN~~~~~-------~~~~~~pfG 212 (282)
+|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+|+||++... ...+.+|||
T Consensus 410 ~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfG 489 (534)
T 2y53_A 410 SVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHG 489 (534)
T ss_dssp EEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEEC
T ss_pred EEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCC
Confidence 999999 99 999999999999999999999999999999999 8999999986421 235789999
Q ss_pred cCCCCCCCCc-chHHHHHHhhhccEEeEeC
Q 023415 213 GVQESGMGAY-HGKFSFDVFSHKKAVLSRG 241 (282)
Q Consensus 213 G~~~SG~G~~-~g~~~l~~~~~~k~v~~~~ 241 (282)
|+|.||+|++ +|.+++++|++.|++...+
T Consensus 490 G~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 490 GPGRAGGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp CSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred CcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence 9999999999 6999999999999988764
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.6e-54 Score=438.59 Aligned_cols=235 Identities=19% Similarity=0.313 Sum_probs=223.7
Q ss_pred hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CC
Q 023415 6 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ES 84 (282)
Q Consensus 6 ~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~ 84 (282)
+++||+++|||||||+||++|||++.|++.+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|. ++
T Consensus 773 ~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~ 851 (1026)
T 4f9i_A 773 ANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPA 851 (1026)
T ss_dssp CSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred cCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCccccc
Confidence 578999999999999999999999999999999999 9999999999999999999999999999999999999996 68
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCC-CceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHH
Q 023415 85 KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 163 (282)
Q Consensus 85 ~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~-g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 163 (282)
+++||++++.+++++.++|+++++.+++++||..++. |+|++|||+.++++++++++||+||||++|++|+|+||||++
T Consensus 852 t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~ 931 (1026)
T 4f9i_A 852 NYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEW 931 (1026)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHH
Confidence 9999999999999999999999865699999976555 999999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEeEeC
Q 023415 164 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG 241 (282)
Q Consensus 164 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v~~~~ 241 (282)
+|+++|||+++|||+|.++++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|.+..
T Consensus 932 aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 932 ANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999999999999999999999999999998776667889999999999995 68999999999999998875
No 43
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9.2e-54 Score=407.02 Aligned_cols=231 Identities=19% Similarity=0.243 Sum_probs=214.7
Q ss_pred hhhhhcCCcE-EEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCc-HHHHHHHHHHHHhhccCC
Q 023415 2 AAAAKHLTPV-LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGK 79 (282)
Q Consensus 2 ~~aa~~~~~~-~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g 79 (282)
++|++++||+ ++|||||||+||++|||++.|++.+++++| +|+||.|++++|+|||+++ +|+|+++|++++++++.|
T Consensus 235 ~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G 313 (490)
T 3ju8_A 235 SQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVG 313 (490)
T ss_dssp HHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBC
T ss_pred HHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCC
Confidence 4677899998 799999999999999999999999999999 9999999999999999997 999999999999999999
Q ss_pred C-CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415 80 N-PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 155 (282)
Q Consensus 80 ~-~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~ 155 (282)
+ |. +.+++||++++.++++++++++++. +|+++++||.. +..|+|++|||+. ++++|++++||+||||++|++|+
T Consensus 314 ~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~ 392 (490)
T 3ju8_A 314 RFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS 392 (490)
T ss_dssp CTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEES
T ss_pred CCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeC
Confidence 8 75 6899999999999999999999986 57899999865 3478999999999 99999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415 156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235 (282)
Q Consensus 156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 235 (282)
|+||||+++|+++|||+++|||+|.+++++++.++++|.|+||++.. ...+.+||||+|.||.+ ++++|++.|
T Consensus 393 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~~~SG~~------~~~~~~~~k 465 (490)
T 3ju8_A 393 DFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT-GAASSAPFGGIGASGNH------RPSAYYAAD 465 (490)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSS-CCCTTSEECCCGGGBSS------CCEETTHHH
T ss_pred CHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcC-CCCCCCCcCCccccchh------HHHhhheeE
Confidence 99999999999999999999999999999999999999999999764 34578999999999975 478999999
Q ss_pred EEeEeC
Q 023415 236 AVLSRG 241 (282)
Q Consensus 236 ~v~~~~ 241 (282)
+|++..
T Consensus 466 ~v~~~~ 471 (490)
T 3ju8_A 466 YCAYPV 471 (490)
T ss_dssp HHEEEE
T ss_pred EEEEec
Confidence 987664
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=4.7e-53 Score=426.91 Aligned_cols=231 Identities=18% Similarity=0.313 Sum_probs=217.9
Q ss_pred cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415 7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK 85 (282)
Q Consensus 7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~ 85 (282)
++||+++|||||||+||++|||++.|++.+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++
T Consensus 753 ~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t 831 (1001)
T 3haz_A 753 PIVPLIAETGGINAMIADATALPEQVADDVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVAT 831 (1001)
T ss_dssp CCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred CCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccC
Confidence 48999999999999999999999999999999999 9999999999999999999999999999999999999995 689
Q ss_pred cccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCC--HHHHHHH
Q 023415 86 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDI 163 (282)
Q Consensus 86 ~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~ 163 (282)
++||++++.+++++.++|+++++.+++ +||..++.|+|++|||+.+ +++.+++||+||||++|++|++ ++|||++
T Consensus 832 ~~Gpli~~~~~~rv~~~i~~a~~~g~v-~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~ 908 (1001)
T 3haz_A 832 HVGPVIDVEAKQRLDAHIARMKTEARL-HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRA 908 (1001)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHHSEE-EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhcCeE-eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHH
Confidence 999999999999999999999876688 8888776799999999974 6788999999999999999986 7999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEeEeC
Q 023415 164 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 241 (282)
Q Consensus 164 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~~ 241 (282)
+|+++|||+++|||+|.+++++++.++++|.|+||+...+...+.+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus 909 aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 909 IERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999999999999999999999999999999877666678999999999999 568899999999999999875
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.4e-51 Score=392.57 Aligned_cols=226 Identities=17% Similarity=0.200 Sum_probs=207.6
Q ss_pred hhhhhcC--CcEEEeCCCCCceEEcCCC---CHHHHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhh
Q 023415 2 AAAAKHL--TPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELEN 75 (282)
Q Consensus 2 ~~aa~~~--~~~~lElgG~np~iV~~dA---Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~ 75 (282)
++|++++ ||+++|||||||+||++|| |++.|++.+++++| .|+||.|++++|||||++ +||+|+++|++++++
T Consensus 272 ~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~ 350 (528)
T 3v4c_A 272 DLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAK 350 (528)
T ss_dssp HHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred HHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHh
Confidence 4678889 9999999999999999999 88999999999999 999999999999999998 999999999999998
Q ss_pred ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCC---CcccccccccceeeEE
Q 023415 76 FYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPIL 152 (282)
Q Consensus 76 ~~~g~~~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~---~~i~~~E~fgPvl~v~ 152 (282)
++.+ +.+||++++.+.++++++++ .+|+++++||.. .|+|++|||+.+++++ |++++||+||||++|+
T Consensus 351 ~~~~-----~~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~ 421 (528)
T 3v4c_A 351 VAPQ-----TMLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVV 421 (528)
T ss_dssp CCCE-----ECSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEE
T ss_pred cccC-----CCCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEE
Confidence 7643 68999999888888888774 467899999975 6899999999988887 8999999999999999
Q ss_pred eeCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhhcc--cceEEECCCCccc-CCCCCCccc-CCCCCCCCcc--h
Q 023415 153 TVDKIEDSFDIINSGTKPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHL-AVHSLPFGG-VQESGMGAYH--G 224 (282)
Q Consensus 153 ~~~~~~eai~~~n~~~~gL~a~i~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~G~~~--g 224 (282)
+|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||+++++. ..+.+|||| +|.||+|+++ |
T Consensus 422 ~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G 501 (528)
T 3v4c_A 422 RVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVG 501 (528)
T ss_dssp EESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSS
T ss_pred ecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCc
Confidence 99999999999999999999999999 8999999999998 9999999976533 458899999 9999999986 9
Q ss_pred HHHHHHhhhccEE
Q 023415 225 KFSFDVFSHKKAV 237 (282)
Q Consensus 225 ~~~l~~~~~~k~v 237 (282)
++++++|++.|++
T Consensus 502 ~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 502 TMSIRRFLRPVAY 514 (528)
T ss_dssp GGGGGGGEEEEEE
T ss_pred HHHHHHhchhHHh
Confidence 9999999999863
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.1e-49 Score=380.68 Aligned_cols=224 Identities=16% Similarity=0.190 Sum_probs=202.9
Q ss_pred hhhhhcC--CcEEEeCCCCCceEEcCCCCHH--HHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhhc
Q 023415 2 AAAAKHL--TPVLLELGGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENF 76 (282)
Q Consensus 2 ~~aa~~~--~~~~lElgG~np~iV~~dADl~--~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~ 76 (282)
++|++++ ||+++|||||||+||++|||++ .|++.+++++| .|+||.|++++|||||++ ++|+|+++|+++++++
T Consensus 239 ~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~ 317 (510)
T 1ez0_A 239 NLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ 317 (510)
T ss_dssp HHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred HHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhc
Confidence 4677776 9999999999999999999999 99999999999 999999999999999999 9999999999999987
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHH--hcCeEeeCCccCCCCceecceEEeeCCCC---CcccccccccceeeE
Q 023415 77 YGKNPLESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPI 151 (282)
Q Consensus 77 ~~g~~~~~~~~gpli~~~~~~~i~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~---~~i~~~E~fgPvl~v 151 (282)
+. ||++++.+.+++.++++++. +|+++++||. .|+|++|||+.+++++ |++++||+||||++|
T Consensus 318 ~~---------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v 385 (510)
T 1ez0_A 318 SP---------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLI 385 (510)
T ss_dssp CC---------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEE
T ss_pred CC---------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEE
Confidence 53 67888889999999999886 3679999987 3899999999988777 999999999999999
Q ss_pred EeeCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHhhc--ccceEEECCCCccc-CCCCCCccc-CCCCCCCCc--c
Q 023415 152 LTVDKIEDSFDIINSGTKPLAAYLFTNNK--KLKQQFVETV--SAGGLVINDTAVHL-AVHSLPFGG-VQESGMGAY--H 223 (282)
Q Consensus 152 ~~~~~~~eai~~~n~~~~gL~a~i~t~d~--~~~~~~~~~l--~~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~G~~--~ 223 (282)
++|+|+||||+++|+++|||+++|||+|. ++++++++++ ++|.|+||++..+. ..+.+|||| ++.||.|+. +
T Consensus 386 ~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~ 465 (510)
T 1ez0_A 386 VVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV 465 (510)
T ss_dssp EEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSS
T ss_pred EEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCc
Confidence 99999999999999999999999999987 7999999999 79999999875432 346899999 789998754 8
Q ss_pred hHHHHHHhhhccEEe
Q 023415 224 GKFSFDVFSHKKAVL 238 (282)
Q Consensus 224 g~~~l~~~~~~k~v~ 238 (282)
|.+++++|++.|++.
T Consensus 466 G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 466 GAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SGGGGGGGEEEEEEE
T ss_pred cHHHHHHhheEEEEc
Confidence 999999999887654
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=3.6e-47 Score=359.54 Aligned_cols=222 Identities=14% Similarity=0.244 Sum_probs=200.1
Q ss_pred hhhhhcCCcEEEeCC-CCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHh------
Q 023415 2 AAAAKHLTPVLLELG-GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE------ 74 (282)
Q Consensus 2 ~~aa~~~~~~~lElg-G~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~------ 74 (282)
++|++++||+ +|+| ||||+||++|||++.|++.+++++| +|+||.|+++++||||+++||+|+++|+++..
T Consensus 205 ~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~ 282 (464)
T 3k9d_A 205 KAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDA 282 (464)
T ss_dssp HHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHH
T ss_pred HHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChh
Confidence 5678899999 8888 9999999999999999999999999 99999999999999999999999999999863
Q ss_pred -hccCCCCC--CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceee
Q 023415 75 -NFYGKNPL--ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLP 150 (282)
Q Consensus 75 -~~~~g~~~--~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~ 150 (282)
.++.|+|. +++++||+++..+++++.++++.+. +++++++||.. ++++++++. +|+||||++
T Consensus 283 ~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~ 348 (464)
T 3k9d_A 283 EAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILA 348 (464)
T ss_dssp HHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEE
T ss_pred hhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEE
Confidence 34556653 5789999999999999999998765 57899998863 467788865 899999999
Q ss_pred EEeeCCHHHHH----HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcc-------cCCCCCCcccCCCCCC
Q 023415 151 ILTVDKIEDSF----DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH-------LAVHSLPFGGVQESGM 219 (282)
Q Consensus 151 v~~~~~~~eai----~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~ 219 (282)
|++|+|+|||| +++|+++|||+++|||+|.+++++|+.++++|+|+||++..+ ...+.+|||| +.+|.
T Consensus 349 v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~ 427 (464)
T 3k9d_A 349 FYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGG 427 (464)
T ss_dssp EEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGT
T ss_pred EEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCC
Confidence 99999999997 799999999999999999999999999999999999998753 2568999999 78999
Q ss_pred CCcchHHHHHHhhhccEEeEe
Q 023415 220 GAYHGKFSFDVFSHKKAVLSR 240 (282)
Q Consensus 220 G~~~g~~~l~~~~~~k~v~~~ 240 (282)
|.++|..++++|++.|+|...
T Consensus 428 g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 428 SSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp CSCCSBCCGGGSEEEEEEEEC
T ss_pred CcCCCCCCHHHheEEEEEEec
Confidence 999999999999999998754
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=6.4e-47 Score=357.64 Aligned_cols=210 Identities=18% Similarity=0.181 Sum_probs=154.8
Q ss_pred CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC---CCCCCC
Q 023415 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLES 84 (282)
Q Consensus 8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~ 84 (282)
+||+++|||||||+||++|||++.|++.+++++| .|+| .|++++|||||+++ |+|+++|+++++++++ |+|.+
T Consensus 231 ~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~- 306 (468)
T 1vlu_A 231 KIPVLGHADGICSIYLDEDADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL- 306 (468)
T ss_dssp CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-
T ss_pred CCCEEeecCCccceEECCCCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-
Confidence 8999999999999999999999999999999999 9999 99999999999999 9999999999999876 65421
Q ss_pred CcccccCCHHHHHHHHHH-HHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHH
Q 023415 85 KDLSRIVNSNHFARLSKL-LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 163 (282)
Q Consensus 85 ~~~gpli~~~~~~~i~~~-i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 163 (282)
+++ ++++. ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||++
T Consensus 307 ---------------~~~~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 360 (468)
T 1vlu_A 307 ---------------KTAYFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQH 360 (468)
T ss_dssp ---------------HHHHHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHH
T ss_pred ---------------hcccccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHH
Confidence 344 55554 4667775 4 689987 7889999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhccEEe
Q 023415 164 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG-----GVQESGMGAYHGKFSFDVFSHKKAVL 238 (282)
Q Consensus 164 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfG-----G~~~SG~G~~~g~~~l~~~~~~k~v~ 238 (282)
+|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||| |++.||+|++ |++++++|++.|+|+
T Consensus 361 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~ 437 (468)
T 1vlu_A 361 INTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQI 437 (468)
T ss_dssp HTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEE
T ss_pred HHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEE
Confidence 999999999999999999999999999999999999764 35778999 9999999999 999999999999998
Q ss_pred EeCCCCCCCCcCCCCch
Q 023415 239 SRGFIGDVPVRYPPYTK 255 (282)
Q Consensus 239 ~~~~~~~~~~~~~~~~~ 255 (282)
.+.. ..+ |||+.
T Consensus 438 ~~~~----~~r-~py~~ 449 (468)
T 1vlu_A 438 RGDG----QVA-SDYLG 449 (468)
T ss_dssp ECSS----CCS-CCC--
T ss_pred ECCC----CcC-ccccc
Confidence 7642 344 88873
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-45 Score=346.84 Aligned_cols=200 Identities=18% Similarity=0.193 Sum_probs=167.1
Q ss_pred CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL 87 (282)
Q Consensus 8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~ 87 (282)
+||+++|||||||+||++|||++.|++.+++++| .| ||.|++++|||||+++||
T Consensus 241 l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------
Confidence 9999999999999999999999999999999999 99 999999999999999998
Q ss_pred cccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhc
Q 023415 88 SRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 166 (282)
Q Consensus 88 gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~ 166 (282)
||+ ++ ++++++. +|++++.|+.....++|+ +++|++++||+||||++|++|+|+||||+++|+
T Consensus 295 ~p~-----~~---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~ 358 (463)
T 2h5g_A 295 TPL-----FD---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHK 358 (463)
T ss_dssp SHH-----HH---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHH
T ss_pred hHH-----HH---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHc
Confidence 232 23 3455554 567887554322234442 578999999999999999999999999999999
Q ss_pred CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhccEEeEeCC
Q 023415 167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AY--HGKFSFDVFSHKKAVLSRGF 242 (282)
Q Consensus 167 ~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~--~g~~~l~~~~~~k~v~~~~~ 242 (282)
.+|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+| ++ +|++++++|++.|+|+.+..
T Consensus 359 ~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 359 YGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp HCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred CCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 999999999999999999999999999999999764 3578999999999999 65 89999999999999988752
Q ss_pred CCCCCCcCCCCchh
Q 023415 243 IGDVPVRYPPYTKG 256 (282)
Q Consensus 243 ~~~~~~~~~~~~~~ 256 (282)
..+ |||+..
T Consensus 437 ----~~r-~~y~~~ 445 (463)
T 2h5g_A 437 ----HVV-SDFSEH 445 (463)
T ss_dssp ----CCG-GGGSTT
T ss_pred ----ccc-CCcccc
Confidence 234 666644
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.5e-44 Score=337.28 Aligned_cols=193 Identities=19% Similarity=0.231 Sum_probs=161.9
Q ss_pred CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC---CCCCCC
Q 023415 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLES 84 (282)
Q Consensus 8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~ 84 (282)
+||+++|||||||+||++|||++.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++++ |+|.
T Consensus 240 ~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-- 315 (444)
T 4ghk_A 240 RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-- 315 (444)
T ss_dssp CSCBCCCCCCCCEEEECTTCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH--
T ss_pred CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH--
Confidence 8999999999999999999999999999999999 9999 9999999999999999999999999999876 5431
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415 85 KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII 164 (282)
Q Consensus 85 ~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 164 (282)
..++++++. .| ++ +++++++++||+||||++|++|+|+||||+++
T Consensus 316 --------------~~~~i~~a~-------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~a 360 (444)
T 4ghk_A 316 --------------ARAVLEAAG-------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHI 360 (444)
T ss_dssp --------------HHHHHHHTT-------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHH
T ss_pred --------------HHHHHHhcc-------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHH
Confidence 245665442 12 12 35678999999999999999999999999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEeEe
Q 023415 165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSR 240 (282)
Q Consensus 165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~ 240 (282)
|+++|||++||||+|.++++++++++++|.|+||+++. ..+.+||||.+.||+| +++|++++++||+.|+|++.
T Consensus 361 N~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~ 438 (444)
T 4ghk_A 361 NEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLG 438 (444)
T ss_dssp HHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEE
T ss_pred HhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEEC
Confidence 99999999999999999999999999999999999765 3578999999999988 67899999999999999876
Q ss_pred C
Q 023415 241 G 241 (282)
Q Consensus 241 ~ 241 (282)
.
T Consensus 439 ~ 439 (444)
T 4ghk_A 439 H 439 (444)
T ss_dssp E
T ss_pred C
Confidence 4
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=3.8e-44 Score=335.53 Aligned_cols=191 Identities=20% Similarity=0.295 Sum_probs=169.9
Q ss_pred CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415 8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL 87 (282)
Q Consensus 8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~ 87 (282)
+||+++|||||||+||++|||+|.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++..+
T Consensus 228 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------- 297 (427)
T 1o20_A 228 TVPVLETGVGNCHIFVDESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-------- 297 (427)
T ss_dssp SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE--------
T ss_pred CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe--------
Confidence 7999999999999999999999999999999999 9999 99999999999999999999999999886431
Q ss_pred cccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 023415 88 SRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 167 (282)
Q Consensus 88 gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 167 (282)
+.||... .+ |+ ||| . ++++++++||+||||++|++|+|+||||+++|++
T Consensus 298 -------------------------~~gg~~~-~~-~~-Ptl-~--~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 346 (427)
T 1o20_A 298 -------------------------VRGCEKT-RE-IV-PDV-V--PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKY 346 (427)
T ss_dssp -------------------------EEECHHH-HH-HS-TTS-E--ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred -------------------------eecChhh-hh-hC-Ccc-c--CCCcchhhcccccceEEEEEECCHHHHHHHHHhC
Confidence 1222211 12 33 885 2 4578999999999999999999999999999999
Q ss_pred CCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEeEeC
Q 023415 168 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRG 241 (282)
Q Consensus 168 ~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 241 (282)
+|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||.+.||+| +++|++++++|++.|+|+...
T Consensus 347 ~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 347 STGHSESILTENYSNAKKFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp CCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred CCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999999999999999998764 3577999999999997 467999999999999998764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.1e-43 Score=332.74 Aligned_cols=215 Identities=21% Similarity=0.308 Sum_probs=168.4
Q ss_pred hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415 2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 81 (282)
Q Consensus 2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~ 81 (282)
++|++++||+++|+|||||+||++|||++.|++.+++|+| +|+||.|+|+++||||+++||+|+++|+++
T Consensus 200 ~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------- 269 (452)
T 3my7_A 200 KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------- 269 (452)
T ss_dssp HHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------
T ss_pred HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------
Confidence 4677899999999999999999999999999999999999 999999999999999999999999999764
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC----CCCceecceE-------EeeCCCCCccccccccccee
Q 023415 82 LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIAPTL-------LLDVPRDSLIMSEEIFGPLL 149 (282)
Q Consensus 82 ~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~----~~g~~~~Ptv-------~~~~~~~~~i~~~E~fgPvl 149 (282)
.||++++.++++++++++++. .++++ +||... ..|+|++||+ +.++++++++++ |+||||+
T Consensus 270 -----~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl 342 (452)
T 3my7_A 270 -----KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTL 342 (452)
T ss_dssp -----TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEE
T ss_pred -----CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEE
Confidence 489999999999999997654 34455 576542 3589999997 668889999876 8999999
Q ss_pred eEEeeCCHHHHHHHHhcCC----CCceEEEecCCHHHHHH---HHhhcccceEEECCCCcccCCCCCCcccCCC------
Q 023415 150 PILTVDKIEDSFDIINSGT----KPLAAYLFTNNKKLKQQ---FVETVSAGGLVINDTAVHLAVHSLPFGGVQE------ 216 (282)
Q Consensus 150 ~v~~~~~~~eai~~~n~~~----~gL~a~i~t~d~~~~~~---~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~------ 216 (282)
+|++|+|+||||+++|++. |||+++|||+|.+++++ ++.++++|+|+||++.. |||.|.
T Consensus 343 ~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~--------~Gg~G~~~~f~~ 414 (452)
T 3my7_A 343 GMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTT--------HGGIGDLYNFNV 414 (452)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC--------------------
T ss_pred EEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCC--------CcccccccccCc
Confidence 9999999999999999974 99999999999777766 99999999999999653 444332
Q ss_pred -----CCCCCcchHHHHHHhhhccEEeEeC
Q 023415 217 -----SGMGAYHGKFSFDVFSHKKAVLSRG 241 (282)
Q Consensus 217 -----SG~G~~~g~~~l~~~~~~k~v~~~~ 241 (282)
-|+|.++|...-++.+...-+++++
T Consensus 415 ~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~ 444 (452)
T 3my7_A 415 APSLTLGCGSWGGNSISENVGPKHLINKKT 444 (452)
T ss_dssp ----------------CCCCCGGGGEEEEE
T ss_pred CceEeeeccccCCCccCCCCChhHeeeeeE
Confidence 1667776665544444444444443
No 53
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=89.32 E-value=7.3 Score=35.56 Aligned_cols=78 Identities=19% Similarity=0.327 Sum_probs=52.7
Q ss_pred eEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc-cceEEECCCCcc-------cCCCCCCcccCCCCCCCC
Q 023415 150 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVINDTAVH-------LAVHSLPFGGVQESGMGA 221 (282)
Q Consensus 150 ~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~-~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~ 221 (282)
.++.++|++||++++|.-- +--.-|.++|+. .+..+++ +|.|++..++.- ..++-+|.+| +.+
T Consensus 306 ~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G-----~AR 376 (434)
T 1kae_A 306 RLIVTKDLAQCVEISNQYG-PEHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTA 376 (434)
T ss_dssp EEEECSSHHHHHHHHHHHC-CSEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGG
T ss_pred eEEEECCHHHHHHHHHHhh-hHhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCCC-----cee
Confidence 5677899999999999831 235688899885 5566665 899999975321 2456677666 344
Q ss_pred cchHHHHHHhhhccE
Q 023415 222 YHGKFSFDVFSHKKA 236 (282)
Q Consensus 222 ~~g~~~l~~~~~~k~ 236 (282)
+.+..+.+.|...-+
T Consensus 377 ~~sgLsV~~F~K~~s 391 (434)
T 1kae_A 377 TCSSLGLADFQKRMT 391 (434)
T ss_dssp TCCCSCGGGGEEEEE
T ss_pred ccCCCcHHhccceee
Confidence 444556677765443
No 54
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=67.00 E-value=16 Score=25.97 Aligned_cols=59 Identities=12% Similarity=0.155 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHHHH--HhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCC
Q 023415 92 NSNHFARLSKLLDDD--KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 169 (282)
Q Consensus 92 ~~~~~~~i~~~i~~a--~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 169 (282)
+++.+++..+.+... +-+++++..|.. |.++.+.. .+-+.|+.|.|.+.|.++.|+-.|
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~--------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS--------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC--------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC--------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCHHH
Confidence 444444444444333 357888876542 44544311 237789999999999999996543
No 55
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=61.44 E-value=28 Score=25.82 Aligned_cols=71 Identities=7% Similarity=0.061 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhcCeEeeCCccC--CCCcee-----cceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 023415 95 HFARLSKLLDDDKVSGKIVHGGERD--KNKLRI-----APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 167 (282)
Q Consensus 95 ~~~~i~~~i~~a~~~~~~~~gg~~~--~~g~~~-----~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 167 (282)
..+...++.++..+.+.++.|+.-. ..+..+ .|+|.++.-.+ ..|..| =+.|+.++|.|||++++.+.
T Consensus 31 ~~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lg-G~~iie~~s~deA~e~A~~~ 105 (124)
T 1s7i_A 31 IVDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLG-GFYLIEARDLNQALQIAAKI 105 (124)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEE-EEEEEEESSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecCCCcC----Ccccce-eEEEEEeCCHHHHHHHHHhC
Confidence 3445556666655556666554321 112221 23333321111 345555 46778899999999999987
Q ss_pred CCC
Q 023415 168 TKP 170 (282)
Q Consensus 168 ~~g 170 (282)
++.
T Consensus 106 P~~ 108 (124)
T 1s7i_A 106 PPG 108 (124)
T ss_dssp GGG
T ss_pred Ccc
Confidence 764
No 56
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=43.58 E-value=21 Score=32.42 Aligned_cols=78 Identities=19% Similarity=0.327 Sum_probs=47.7
Q ss_pred eEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc-cceEEECCCCcc-------cCCCCCCcccCCCCCCCC
Q 023415 150 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVINDTAVH-------LAVHSLPFGGVQESGMGA 221 (282)
Q Consensus 150 ~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~-~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~ 221 (282)
.++.++|++|+++++|.-- +--.-|.++|+. .+..+++ +|.|++...+.- ..++-+|.+| ..+
T Consensus 313 ~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G-----~Ar 383 (423)
T 4gic_A 313 GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSG-----TAR 383 (423)
T ss_dssp EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCCCCSEEEEC----------------CCCCTT-----GGG
T ss_pred eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCC-----ccc
Confidence 5666899999999999821 235678888875 4666665 899999875321 1344555554 445
Q ss_pred cchHHHHHHhhhccE
Q 023415 222 YHGKFSFDVFSHKKA 236 (282)
Q Consensus 222 ~~g~~~l~~~~~~k~ 236 (282)
+.+..+...|...-+
T Consensus 384 ~~sgLsv~~F~K~~s 398 (423)
T 4gic_A 384 FSSPLGVYDFQKRSS 398 (423)
T ss_dssp TCCCCCGGGGEEEEE
T ss_pred ccCCCCHHHeeeeee
Confidence 555556677765443
No 57
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=38.06 E-value=66 Score=24.42 Aligned_cols=63 Identities=13% Similarity=0.216 Sum_probs=40.2
Q ss_pred cCCHHHHHHHHHHHHHH--HhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 023415 90 IVNSNHFARLSKLLDDD--KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 167 (282)
Q Consensus 90 li~~~~~~~i~~~i~~a--~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 167 (282)
+.+++.+++..+.+..+ +-|+++++.|.. +.++.+.. .|.+ ..+.|+.|.|.+.++++.++-
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~--------~~~lEG~~-------~e~~-~~~viieFPS~~aa~a~y~Sp 108 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF--------ELMLIGPQ-------DEHW-DHVFIAEYPSVAAFVEMIRDP 108 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE--------EEEEESCT-------TCCC-SEEEEEEESCHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC--------ceeEECCC-------CCCC-CeEEEEECCCHHHHHHHHcCH
Confidence 45566666666555544 247888876653 23444321 1222 578999999999999999865
Q ss_pred C
Q 023415 168 T 168 (282)
Q Consensus 168 ~ 168 (282)
.
T Consensus 109 e 109 (143)
T 3hhl_A 109 V 109 (143)
T ss_dssp H
T ss_pred H
Confidence 3
No 58
>1mwq_A Hypothetical protein HI0828; YCII_HAEIN, structural genomic structure 2 function project, S2F, unknown function; HET: MSE 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=33.06 E-value=1e+02 Score=21.38 Aligned_cols=22 Identities=9% Similarity=0.052 Sum_probs=18.5
Q ss_pred eeeEEeeCCHHHHHHHHhcCCC
Q 023415 148 LLPILTVDKIEDSFDIINSGTK 169 (282)
Q Consensus 148 vl~v~~~~~~~eai~~~n~~~~ 169 (282)
-+.|+.++|.+||.+++.+.+|
T Consensus 62 g~~i~~a~s~eea~~~~~~dP~ 83 (101)
T 1mwq_A 62 STVIAQFENLQAAKDWAAQDPY 83 (101)
T ss_dssp EEEEEECSSHHHHHHHHHTCHH
T ss_pred EEEEEEeCCHHHHHHHHHhCCh
Confidence 5567788999999999998765
No 59
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=31.88 E-value=1.3e+02 Score=20.83 Aligned_cols=23 Identities=22% Similarity=0.211 Sum_probs=19.8
Q ss_pred ceeeEEeeCCHHHHHHHHhcCCC
Q 023415 147 PLLPILTVDKIEDSFDIINSGTK 169 (282)
Q Consensus 147 Pvl~v~~~~~~~eai~~~n~~~~ 169 (282)
..+.|+.|.|.+.|.++.|+-.|
T Consensus 53 ~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHH
Confidence 57899999999999999997544
No 60
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.25 E-value=20 Score=28.42 Aligned_cols=48 Identities=23% Similarity=0.420 Sum_probs=33.5
Q ss_pred cccccceeeEEeeCCHHHHHHHH----hcCCCCceEEEecCCHHHHHHHHhh
Q 023415 142 EEIFGPLLPILTVDKIEDSFDII----NSGTKPLAAYLFTNNKKLKQQFVET 189 (282)
Q Consensus 142 ~E~fgPvl~v~~~~~~~eai~~~----n~~~~gL~a~i~t~d~~~~~~~~~~ 189 (282)
||-||+..+..--.++++|++.| .+...-|-.++++........|..+
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~ 76 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQ 76 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHH
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHH
Confidence 34556555555457899999999 7777779999999765444555543
Done!