Query 023416
Match_columns 282
No_of_seqs 290 out of 1119
Neff 11.7
Searched_HMMs 46136
Date Fri Mar 29 03:52:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023416.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023416hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.4E-35 3E-40 232.4 21.6 252 1-276 34-293 (294)
2 PLN02679 hydrolase, alpha/beta 100.0 1.1E-33 2.4E-38 226.4 22.2 254 1-278 93-358 (360)
3 PRK03592 haloalkane dehalogena 100.0 4E-33 8.7E-38 218.7 20.4 252 1-279 32-291 (295)
4 TIGR02240 PHA_depoly_arom poly 100.0 3.8E-33 8.2E-38 216.7 18.7 239 1-279 30-268 (276)
5 PLN02578 hydrolase 100.0 2.1E-32 4.6E-37 218.9 21.7 255 1-275 91-353 (354)
6 PLN02965 Probable pheophorbida 100.0 2.3E-32 4.9E-37 209.8 19.5 241 1-277 8-253 (255)
7 KOG4178 Soluble epoxide hydrol 100.0 2.1E-32 4.5E-37 204.8 17.1 256 1-277 49-320 (322)
8 PRK00870 haloalkane dehalogena 100.0 2.5E-31 5.3E-36 209.1 19.4 240 1-277 51-301 (302)
9 PRK03204 haloalkane dehalogena 100.0 4E-31 8.6E-36 205.7 18.0 244 1-274 39-285 (286)
10 PRK10349 carboxylesterase BioH 100.0 1.5E-30 3.3E-35 200.1 19.9 235 1-276 18-255 (256)
11 TIGR03343 biphenyl_bphD 2-hydr 100.0 8.6E-30 1.9E-34 198.8 20.4 242 1-275 35-281 (282)
12 PLN03084 alpha/beta hydrolase 100.0 1.5E-29 3.3E-34 201.6 21.5 243 1-276 132-383 (383)
13 TIGR03056 bchO_mg_che_rel puta 100.0 1.6E-29 3.5E-34 196.9 19.7 244 1-275 33-278 (278)
14 KOG1454 Predicted hydrolase/ac 100.0 3.1E-30 6.8E-35 201.2 14.3 254 1-278 63-325 (326)
15 KOG4409 Predicted hydrolase/ac 100.0 7E-29 1.5E-33 186.5 19.9 255 1-276 95-363 (365)
16 PRK10673 acyl-CoA esterase; Pr 100.0 3.6E-29 7.8E-34 192.5 18.7 233 1-276 21-254 (255)
17 PLN03087 BODYGUARD 1 domain co 100.0 1.5E-28 3.3E-33 199.6 23.2 254 1-277 206-479 (481)
18 PLN02385 hydrolase; alpha/beta 100.0 6.6E-29 1.4E-33 198.8 20.5 247 1-279 92-347 (349)
19 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.3E-28 2.7E-33 188.8 19.4 233 1-275 18-251 (251)
20 PHA02857 monoglyceride lipase; 100.0 5.6E-28 1.2E-32 187.9 22.0 235 1-278 30-274 (276)
21 PRK11126 2-succinyl-6-hydroxy- 100.0 1.5E-28 3.2E-33 187.6 18.1 233 1-276 7-241 (242)
22 PRK06489 hypothetical protein; 100.0 2.1E-28 4.5E-33 196.5 19.6 247 1-278 74-358 (360)
23 TIGR01738 bioH putative pimelo 100.0 5.4E-28 1.2E-32 184.7 20.4 234 1-274 9-245 (245)
24 TIGR03611 RutD pyrimidine util 100.0 2E-28 4.4E-33 188.5 17.3 236 1-276 18-257 (257)
25 PF12697 Abhydrolase_6: Alpha/ 100.0 1.4E-28 3E-33 185.7 15.1 223 1-269 3-228 (228)
26 PLN02298 hydrolase, alpha/beta 100.0 2.9E-27 6.2E-32 188.3 21.8 241 1-280 64-320 (330)
27 PRK10749 lysophospholipase L2; 100.0 2.4E-28 5.2E-33 193.8 14.9 251 1-277 59-329 (330)
28 PRK08775 homoserine O-acetyltr 100.0 8.6E-28 1.9E-32 191.8 16.8 239 13-280 84-342 (343)
29 PRK07581 hypothetical protein; 100.0 3E-27 6.4E-32 188.8 18.7 248 12-278 55-337 (339)
30 TIGR03695 menH_SHCHC 2-succiny 100.0 6.5E-27 1.4E-31 179.1 18.6 242 1-275 6-251 (251)
31 PRK14875 acetoin dehydrogenase 100.0 1E-26 2.2E-31 188.4 20.7 234 1-276 136-370 (371)
32 PLN02894 hydrolase, alpha/beta 100.0 3.6E-26 7.8E-31 185.0 23.0 258 1-278 110-386 (402)
33 PLN02211 methyl indole-3-aceta 100.0 7E-27 1.5E-31 180.2 16.9 244 1-278 23-271 (273)
34 TIGR01250 pro_imino_pep_2 prol 100.0 5.9E-26 1.3E-30 177.6 22.3 245 1-275 30-288 (288)
35 TIGR01392 homoserO_Ac_trn homo 99.9 1.6E-26 3.6E-31 185.0 17.7 256 1-275 36-351 (351)
36 PRK00175 metX homoserine O-ace 99.9 4E-26 8.6E-31 184.1 18.7 262 1-279 53-376 (379)
37 PLN02652 hydrolase; alpha/beta 99.9 5.1E-26 1.1E-30 182.6 15.0 238 1-279 141-389 (395)
38 KOG1455 Lysophospholipase [Lip 99.9 4.9E-25 1.1E-29 162.9 18.2 242 2-277 60-312 (313)
39 COG2267 PldB Lysophospholipase 99.9 2.6E-25 5.6E-30 172.1 16.8 247 1-280 39-297 (298)
40 PLN02980 2-oxoglutarate decarb 99.9 3.4E-25 7.3E-30 204.6 20.2 246 1-280 1376-1642(1655)
41 PLN02511 hydrolase 99.9 2.2E-24 4.8E-29 174.0 16.6 243 1-277 105-365 (388)
42 KOG2984 Predicted hydrolase [G 99.9 4.8E-25 1E-29 152.6 10.0 226 1-277 47-276 (277)
43 PRK05855 short chain dehydroge 99.9 5.5E-25 1.2E-29 188.6 12.5 249 1-278 30-293 (582)
44 TIGR01607 PST-A Plasmodium sub 99.9 7.6E-23 1.6E-27 161.9 18.8 231 15-275 64-331 (332)
45 PF00561 Abhydrolase_1: alpha/ 99.9 2.3E-24 5E-29 163.2 7.8 222 30-271 1-229 (230)
46 TIGR01249 pro_imino_pep_1 prol 99.9 1.4E-22 2.9E-27 159.6 17.6 96 1-109 32-129 (306)
47 KOG2382 Predicted alpha/beta h 99.9 5.4E-22 1.2E-26 149.3 16.9 245 1-278 57-314 (315)
48 PRK05077 frsA fermentation/res 99.9 3.6E-21 7.9E-26 156.0 20.7 204 11-277 208-412 (414)
49 TIGR03100 hydr1_PEP hydrolase, 99.9 3E-21 6.6E-26 149.1 18.7 219 10-276 42-274 (274)
50 COG1647 Esterase/lipase [Gener 99.9 1.1E-21 2.5E-26 138.2 14.5 220 1-276 20-243 (243)
51 PRK06765 homoserine O-acetyltr 99.9 7.4E-21 1.6E-25 152.4 20.1 231 29-276 99-387 (389)
52 PRK10985 putative hydrolase; P 99.9 4.3E-21 9.4E-26 152.0 16.7 241 1-277 63-320 (324)
53 TIGR01836 PHA_synth_III_C poly 99.8 4.5E-19 9.8E-24 142.1 18.0 89 13-110 82-171 (350)
54 TIGR01838 PHA_synth_I poly(R)- 99.8 1.7E-19 3.7E-24 148.5 14.9 247 1-264 193-462 (532)
55 PRK13604 luxD acyl transferase 99.8 8.4E-19 1.8E-23 133.6 15.4 200 2-260 43-247 (307)
56 PRK11071 esterase YqiA; Provis 99.8 9.2E-18 2E-22 122.1 16.3 181 1-275 6-189 (190)
57 PLN02872 triacylglycerol lipas 99.8 1.5E-18 3.2E-23 139.2 11.7 265 1-280 79-392 (395)
58 COG0596 MhpC Predicted hydrola 99.8 3.5E-17 7.6E-22 126.3 16.8 245 2-275 27-280 (282)
59 PRK07868 acyl-CoA synthetase; 99.8 1.5E-17 3.3E-22 149.4 16.4 261 1-280 72-364 (994)
60 KOG2564 Predicted acetyltransf 99.8 2.7E-18 5.8E-23 125.4 7.6 95 8-108 84-180 (343)
61 PRK10566 esterase; Provisional 99.7 3.7E-16 8.1E-21 119.7 18.0 203 1-277 32-248 (249)
62 PF06342 DUF1057: Alpha/beta h 99.7 3.9E-16 8.5E-21 115.2 16.3 92 8-110 45-137 (297)
63 COG3208 GrsT Predicted thioest 99.7 1.1E-15 2.4E-20 110.6 15.2 211 10-276 19-235 (244)
64 TIGR03101 hydr2_PEP hydrolase, 99.7 1.2E-16 2.5E-21 121.3 10.0 102 1-109 30-133 (266)
65 KOG2931 Differentiation-relate 99.7 7.2E-15 1.6E-19 108.5 17.2 227 16-276 70-305 (326)
66 COG0429 Predicted hydrolase of 99.6 4.8E-15 1E-19 111.9 13.2 242 1-279 80-342 (345)
67 KOG1838 Alpha/beta hydrolase [ 99.6 9.9E-15 2.1E-19 114.2 14.1 101 1-108 130-234 (409)
68 KOG4667 Predicted esterase [Li 99.6 1.2E-14 2.6E-19 102.4 12.9 195 2-260 39-242 (269)
69 PF03096 Ndr: Ndr family; Int 99.6 1.3E-15 2.9E-20 113.9 7.8 226 16-277 47-279 (283)
70 PF12695 Abhydrolase_5: Alpha/ 99.6 1.2E-14 2.6E-19 101.9 11.1 140 1-257 4-145 (145)
71 KOG1552 Predicted alpha/beta h 99.6 1.1E-14 2.4E-19 106.3 10.9 176 15-279 77-254 (258)
72 COG2021 MET2 Homoserine acetyl 99.6 8E-13 1.7E-17 101.7 19.9 231 29-276 92-367 (368)
73 PF00326 Peptidase_S9: Prolyl 99.6 3.2E-14 6.9E-19 106.3 12.1 191 14-278 3-210 (213)
74 COG4757 Predicted alpha/beta h 99.5 1.3E-13 2.8E-18 98.5 11.1 227 10-274 42-280 (281)
75 TIGR03230 lipo_lipase lipoprot 99.5 3.2E-14 6.9E-19 114.4 8.7 107 1-109 46-153 (442)
76 PF10230 DUF2305: Uncharacteri 99.5 3.3E-12 7.2E-17 97.8 17.9 232 11-257 15-264 (266)
77 TIGR01839 PHA_synth_II poly(R) 99.5 4.4E-13 9.6E-18 109.9 13.0 87 15-110 237-328 (560)
78 TIGR02821 fghA_ester_D S-formy 99.5 1.1E-11 2.4E-16 96.1 17.6 100 1-109 47-172 (275)
79 PLN02442 S-formylglutathione h 99.5 5E-12 1.1E-16 98.2 15.1 97 1-109 52-177 (283)
80 COG1506 DAP2 Dipeptidyl aminop 99.4 6.7E-12 1.5E-16 107.6 14.7 205 2-279 400-618 (620)
81 PRK11460 putative hydrolase; P 99.4 8.7E-12 1.9E-16 94.0 13.1 170 1-274 21-209 (232)
82 KOG4391 Predicted alpha/beta h 99.4 2.7E-12 5.8E-17 90.9 7.4 193 8-278 88-283 (300)
83 cd00707 Pancreat_lipase_like P 99.3 2.2E-12 4.7E-17 99.4 5.6 105 1-109 41-146 (275)
84 PF06500 DUF1100: Alpha/beta h 99.3 1.3E-11 2.9E-16 97.6 10.0 200 13-277 206-409 (411)
85 PRK10162 acetyl esterase; Prov 99.3 3.7E-10 8E-15 89.3 17.5 91 9-109 95-194 (318)
86 PF00975 Thioesterase: Thioest 99.3 1.7E-10 3.6E-15 87.3 15.0 94 2-108 6-102 (229)
87 PF08538 DUF1749: Protein of u 99.2 1.4E-11 3E-16 93.5 6.3 99 2-111 39-149 (303)
88 TIGR01849 PHB_depoly_PhaZ poly 99.2 5.4E-10 1.2E-14 89.4 14.8 85 15-111 120-209 (406)
89 KOG2565 Predicted hydrolases o 99.2 2.1E-10 4.6E-15 87.9 11.6 100 1-108 157-262 (469)
90 PF05728 UPF0227: Uncharacteri 99.2 1.7E-09 3.7E-14 77.8 15.7 86 2-109 5-90 (187)
91 PF06821 Ser_hydrolase: Serine 99.2 1E-10 2.2E-15 83.1 8.7 152 1-261 3-157 (171)
92 PF01738 DLH: Dienelactone hyd 99.2 7.9E-10 1.7E-14 82.9 13.2 164 13-276 29-216 (218)
93 TIGR01840 esterase_phb esteras 99.2 2.2E-10 4.8E-15 85.4 10.1 81 29-109 43-129 (212)
94 PRK05371 x-prolyl-dipeptidyl a 99.1 9.3E-09 2E-13 89.9 19.5 88 17-109 271-372 (767)
95 TIGR03502 lipase_Pla1_cef extr 99.1 1.5E-10 3.3E-15 99.3 8.3 89 1-95 454-575 (792)
96 COG2945 Predicted hydrolase of 99.1 5.3E-09 1.1E-13 73.2 14.3 153 15-275 50-205 (210)
97 TIGR00976 /NonD putative hydro 99.1 9.7E-10 2.1E-14 93.5 12.2 87 17-109 45-131 (550)
98 PF12146 Hydrolase_4: Putative 99.1 1.8E-10 4E-15 70.5 5.0 58 1-64 21-79 (79)
99 PRK10252 entF enterobactin syn 99.1 1.1E-09 2.4E-14 102.7 12.2 93 2-108 1074-1169(1296)
100 PLN00021 chlorophyllase 99.1 3.8E-10 8.3E-15 88.3 7.6 103 1-109 57-165 (313)
101 PLN02733 phosphatidylcholine-s 99.1 3.4E-10 7.3E-15 92.0 7.1 92 9-113 105-204 (440)
102 PF02273 Acyl_transf_2: Acyl t 99.0 1.6E-09 3.5E-14 78.6 7.5 202 3-263 37-242 (294)
103 COG3243 PhaC Poly(3-hydroxyalk 99.0 4E-09 8.7E-14 82.8 9.9 245 16-278 130-400 (445)
104 KOG3975 Uncharacterized conser 98.9 1.7E-07 3.7E-12 68.4 13.3 243 10-274 41-300 (301)
105 PF05448 AXE1: Acetyl xylan es 98.8 5.4E-07 1.2E-11 71.0 16.8 63 208-276 254-319 (320)
106 PF09752 DUF2048: Uncharacteri 98.8 2.1E-07 4.5E-12 72.3 12.3 58 218-275 289-347 (348)
107 COG0412 Dienelactone hydrolase 98.8 3.5E-07 7.5E-12 68.9 13.3 165 13-278 42-234 (236)
108 PF02129 Peptidase_S15: X-Pro 98.8 8.4E-07 1.8E-11 68.9 15.6 84 21-110 53-136 (272)
109 PF03583 LIP: Secretory lipase 98.8 1.1E-06 2.4E-11 68.5 16.0 59 218-279 219-283 (290)
110 PF07859 Abhydrolase_3: alpha/ 98.7 1.6E-07 3.5E-12 70.0 10.3 84 15-109 18-109 (211)
111 PTZ00472 serine carboxypeptida 98.7 5.4E-06 1.2E-10 68.9 19.2 80 30-109 122-215 (462)
112 COG3571 Predicted hydrolase of 98.7 2.5E-06 5.5E-11 58.1 13.8 167 10-277 28-211 (213)
113 PRK10115 protease 2; Provision 98.7 1.2E-06 2.6E-11 76.3 15.8 95 7-109 456-558 (686)
114 PF06057 VirJ: Bacterial virul 98.7 8E-08 1.7E-12 68.0 6.9 83 16-109 20-106 (192)
115 PF02230 Abhydrolase_2: Phosph 98.7 3.9E-07 8.6E-12 68.1 11.2 56 218-277 155-215 (216)
116 COG3545 Predicted esterase of 98.6 2.4E-06 5.1E-11 59.4 12.3 135 49-276 40-178 (181)
117 COG3319 Thioesterase domains o 98.5 2.2E-06 4.8E-11 64.7 11.8 89 9-109 11-102 (257)
118 COG3458 Acetyl esterase (deace 98.5 1.3E-06 2.9E-11 64.8 10.0 189 29-279 109-319 (321)
119 PF06028 DUF915: Alpha/beta hy 98.5 3.2E-06 6.9E-11 64.1 12.1 104 1-110 16-143 (255)
120 smart00824 PKS_TE Thioesterase 98.5 8.2E-07 1.8E-11 66.1 8.9 88 9-108 10-100 (212)
121 PF12740 Chlorophyllase2: Chlo 98.5 3.2E-07 6.9E-12 68.8 6.2 103 1-109 22-130 (259)
122 KOG1515 Arylacetamide deacetyl 98.5 1.3E-05 2.8E-10 63.2 15.0 94 10-110 107-207 (336)
123 PF07819 PGAP1: PGAP1-like pro 98.5 1E-06 2.2E-11 65.9 7.9 104 1-110 9-123 (225)
124 COG0400 Predicted esterase [Ge 98.4 4.8E-06 1E-10 60.9 9.9 119 55-277 83-205 (207)
125 COG0657 Aes Esterase/lipase [L 98.4 2.6E-05 5.7E-10 61.9 14.5 85 16-110 100-191 (312)
126 KOG2624 Triglyceride lipase-ch 98.3 4E-06 8.7E-11 67.4 8.8 102 1-110 78-199 (403)
127 PF08840 BAAT_C: BAAT / Acyl-C 98.3 1E-05 2.2E-10 60.2 9.4 52 55-110 5-56 (213)
128 KOG1553 Predicted alpha/beta h 98.2 3.6E-06 7.9E-11 64.6 5.4 75 29-108 268-343 (517)
129 KOG2100 Dipeptidyl aminopeptid 98.2 4.2E-05 9.1E-10 67.4 12.6 190 10-280 545-750 (755)
130 PF05577 Peptidase_S28: Serine 98.2 6E-06 1.3E-10 68.6 6.8 91 17-110 50-148 (434)
131 PF08386 Abhydrolase_4: TAP-li 98.1 1.5E-05 3.3E-10 51.7 7.2 61 218-278 34-95 (103)
132 KOG3043 Predicted hydrolase re 98.1 7.4E-06 1.6E-10 59.2 5.2 60 218-277 164-240 (242)
133 PF00151 Lipase: Lipase; Inte 98.0 7E-07 1.5E-11 70.5 -1.7 109 1-110 76-187 (331)
134 KOG4840 Predicted hydrolases o 98.0 0.00024 5.1E-09 51.5 11.0 86 15-110 56-144 (299)
135 KOG2281 Dipeptidyl aminopeptid 98.0 0.00019 4E-09 60.1 11.6 193 8-276 657-866 (867)
136 PF07224 Chlorophyllase: Chlor 97.9 2.3E-05 5.1E-10 58.2 5.4 103 2-110 52-157 (307)
137 PF00450 Peptidase_S10: Serine 97.9 0.00046 1E-08 57.2 13.1 80 30-109 86-180 (415)
138 PF01674 Lipase_2: Lipase (cla 97.8 2.1E-06 4.6E-11 63.4 -1.1 87 1-95 6-95 (219)
139 PRK04940 hypothetical protein; 97.8 0.004 8.6E-08 44.4 14.8 52 219-275 125-178 (180)
140 PF05677 DUF818: Chlamydia CHL 97.7 0.00013 2.8E-09 56.6 6.8 73 18-96 163-236 (365)
141 PF11339 DUF3141: Protein of u 97.7 0.0044 9.6E-08 51.1 15.4 61 48-109 114-174 (581)
142 KOG4627 Kynurenine formamidase 97.7 0.00031 6.7E-09 50.3 7.8 51 209-261 200-251 (270)
143 KOG1551 Uncharacterized conser 97.7 0.001 2.3E-08 49.6 10.8 58 221-278 309-367 (371)
144 PF05990 DUF900: Alpha/beta hy 97.7 0.00016 3.5E-09 54.5 6.9 77 31-109 50-136 (233)
145 PLN02633 palmitoyl protein thi 97.7 0.0012 2.7E-08 50.9 11.4 100 1-110 30-131 (314)
146 PF02450 LCAT: Lecithin:choles 97.7 3.7E-05 8E-10 62.7 3.5 86 13-113 66-163 (389)
147 KOG2551 Phospholipase/carboxyh 97.7 0.00016 3.5E-09 52.4 6.2 57 218-276 163-219 (230)
148 PLN02606 palmitoyl-protein thi 97.7 0.016 3.5E-07 44.9 17.3 100 1-110 31-132 (306)
149 COG1075 LipA Predicted acetylt 97.6 0.00014 3.1E-09 58.0 5.4 96 1-110 64-164 (336)
150 PF05705 DUF829: Eukaryotic pr 97.5 0.0035 7.5E-08 47.8 12.3 57 218-274 178-240 (240)
151 PF12715 Abhydrolase_7: Abhydr 97.5 0.00022 4.7E-09 56.6 5.4 84 16-107 151-257 (390)
152 KOG3253 Predicted alpha/beta h 97.5 0.0022 4.7E-08 53.6 11.1 43 218-260 304-348 (784)
153 KOG2182 Hydrolytic enzymes of 97.2 0.001 2.2E-08 54.3 6.3 88 19-109 111-206 (514)
154 KOG2183 Prolylcarboxypeptidase 97.2 0.0012 2.5E-08 52.6 6.4 79 30-108 112-200 (492)
155 PLN02517 phosphatidylcholine-s 97.2 0.00037 8E-09 58.4 3.9 94 11-112 155-265 (642)
156 PF12048 DUF3530: Protein of u 97.2 0.0043 9.3E-08 49.0 9.7 36 74-109 192-228 (310)
157 PF10503 Esterase_phd: Esteras 97.2 0.0021 4.4E-08 47.9 7.4 84 19-109 39-131 (220)
158 PF00756 Esterase: Putative es 97.2 0.00046 9.9E-09 53.0 4.2 53 54-109 97-149 (251)
159 KOG2369 Lecithin:cholesterol a 97.1 0.00064 1.4E-08 55.1 3.9 90 12-112 124-227 (473)
160 KOG2541 Palmitoyl protein thio 96.8 0.011 2.3E-07 44.6 8.2 99 1-109 28-127 (296)
161 PF07082 DUF1350: Protein of u 96.8 0.0042 9.1E-08 46.4 5.7 94 7-107 29-122 (250)
162 PF05057 DUF676: Putative seri 96.7 0.0022 4.9E-08 47.9 4.2 85 1-94 9-97 (217)
163 PF04301 DUF452: Protein of un 96.7 0.047 1E-06 40.3 10.7 37 222-260 169-205 (213)
164 COG2936 Predicted acyl esteras 96.7 0.006 1.3E-07 51.3 6.7 84 20-111 75-160 (563)
165 PF03959 FSH1: Serine hydrolas 96.6 0.002 4.4E-08 48.0 3.2 46 218-263 161-207 (212)
166 PF01764 Lipase_3: Lipase (cla 96.5 0.0047 1E-07 42.6 4.4 36 54-95 49-84 (140)
167 cd00741 Lipase Lipase. Lipase 96.5 0.0069 1.5E-07 42.6 5.2 35 74-108 27-65 (153)
168 PRK10439 enterobactin/ferric e 96.5 0.0092 2E-07 49.2 6.6 53 55-109 269-322 (411)
169 PF10142 PhoPQ_related: PhoPQ- 96.4 0.09 2E-06 42.4 11.6 61 212-277 258-320 (367)
170 COG2819 Predicted hydrolase of 96.4 0.007 1.5E-07 45.8 4.9 50 56-109 121-171 (264)
171 COG4188 Predicted dienelactone 96.3 0.018 3.9E-07 45.7 6.6 83 9-95 82-179 (365)
172 COG3509 LpqC Poly(3-hydroxybut 96.2 0.018 4E-07 44.1 6.0 88 19-109 84-178 (312)
173 COG4782 Uncharacterized protei 96.2 0.017 3.7E-07 45.6 6.0 74 30-109 147-233 (377)
174 COG3150 Predicted esterase [Ge 96.2 0.033 7.2E-07 38.9 6.6 65 35-109 26-90 (191)
175 PF06259 Abhydrolase_8: Alpha/ 96.1 0.019 4.2E-07 41.1 5.6 58 52-110 87-144 (177)
176 KOG3724 Negative regulator of 96.0 0.013 2.8E-07 50.8 5.1 83 30-115 133-226 (973)
177 COG1073 Hydrolases of the alph 95.9 0.029 6.4E-07 43.9 6.6 66 210-277 225-297 (299)
178 cd00519 Lipase_3 Lipase (class 95.7 0.019 4.2E-07 43.4 4.7 22 74-95 127-148 (229)
179 PLN02571 triacylglycerol lipas 95.7 0.021 4.5E-07 46.5 4.7 39 53-95 208-246 (413)
180 PF11288 DUF3089: Protein of u 95.3 0.042 9.1E-07 40.3 5.0 61 30-95 46-115 (207)
181 PF11187 DUF2974: Protein of u 95.3 0.048 1E-06 40.9 5.3 36 74-109 83-122 (224)
182 PLN02454 triacylglycerol lipas 95.2 0.026 5.7E-07 45.9 4.0 20 76-95 229-248 (414)
183 PLN02408 phospholipase A1 95.2 0.038 8.1E-07 44.3 4.7 37 55-95 184-220 (365)
184 COG4099 Predicted peptidase [G 95.2 0.082 1.8E-06 40.7 6.1 43 63-109 261-303 (387)
185 PLN02324 triacylglycerol lipas 95.0 0.045 9.8E-07 44.5 4.7 37 55-95 199-235 (415)
186 PLN02162 triacylglycerol lipas 95.0 0.045 9.7E-07 45.1 4.7 34 55-94 264-297 (475)
187 cd00312 Esterase_lipase Estera 94.8 0.053 1.2E-06 46.2 4.9 85 19-109 117-212 (493)
188 PLN00413 triacylglycerol lipas 94.7 0.057 1.2E-06 44.6 4.7 35 54-94 269-303 (479)
189 PLN02802 triacylglycerol lipas 94.6 0.062 1.3E-06 44.8 4.7 37 55-95 314-350 (509)
190 PLN02310 triacylglycerol lipas 94.4 0.078 1.7E-06 43.1 4.6 39 54-94 190-228 (405)
191 COG4814 Uncharacterized protei 94.4 0.043 9.3E-07 41.1 2.9 99 2-109 51-175 (288)
192 PLN02934 triacylglycerol lipas 94.3 0.075 1.6E-06 44.3 4.4 35 54-94 306-340 (515)
193 PF10340 DUF2424: Protein of u 93.9 0.31 6.7E-06 39.4 7.1 75 30-110 155-235 (374)
194 PLN03037 lipase class 3 family 93.7 0.12 2.6E-06 43.2 4.7 39 54-94 299-337 (525)
195 PLN02761 lipase class 3 family 93.7 0.12 2.6E-06 43.3 4.7 40 55-94 274-313 (527)
196 KOG4569 Predicted lipase [Lipi 93.7 0.12 2.7E-06 41.4 4.6 37 53-95 155-191 (336)
197 COG1770 PtrB Protease II [Amin 93.6 0.14 3.1E-06 43.9 4.9 83 20-110 472-562 (682)
198 PLN02213 sinapoylglucose-malat 93.4 0.14 3.1E-06 40.9 4.5 80 30-109 2-95 (319)
199 PLN02753 triacylglycerol lipas 93.3 0.14 3E-06 43.0 4.4 39 55-94 293-331 (531)
200 PF11144 DUF2920: Protein of u 93.1 0.24 5.1E-06 40.3 5.3 36 75-110 184-219 (403)
201 KOG3101 Esterase D [General fu 93.1 0.11 2.5E-06 37.8 3.1 36 74-109 140-175 (283)
202 PLN02719 triacylglycerol lipas 92.7 0.19 4.2E-06 42.0 4.4 21 74-94 297-317 (518)
203 PF02089 Palm_thioest: Palmito 92.6 0.084 1.8E-06 40.7 2.1 102 1-109 10-115 (279)
204 COG1505 Serine proteases of th 92.5 1.5 3.3E-05 37.5 9.2 88 13-108 438-533 (648)
205 PF01083 Cutinase: Cutinase; 92.4 0.19 4.1E-06 36.4 3.6 89 17-109 27-121 (179)
206 PLN02209 serine carboxypeptida 92.0 0.63 1.4E-05 38.9 6.6 80 30-109 118-211 (437)
207 COG4553 DepA Poly-beta-hydroxy 91.9 5 0.00011 31.3 13.0 83 15-109 121-208 (415)
208 PLN02213 sinapoylglucose-malat 91.9 0.66 1.4E-05 37.1 6.4 58 218-276 233-316 (319)
209 COG3946 VirJ Type IV secretory 91.7 0.2 4.4E-06 40.4 3.3 74 10-94 268-345 (456)
210 PLN02847 triacylglycerol lipas 91.6 0.33 7.1E-06 41.5 4.5 21 74-94 250-270 (633)
211 COG2382 Fes Enterochelin ester 91.6 0.34 7.4E-06 37.6 4.3 37 73-109 175-211 (299)
212 KOG1282 Serine carboxypeptidas 91.5 0.95 2.1E-05 37.8 7.0 80 30-109 118-212 (454)
213 PF03403 PAF-AH_p_II: Platelet 91.1 0.28 6E-06 40.2 3.6 34 75-109 228-261 (379)
214 PLN03016 sinapoylglucose-malat 91.0 0.95 2.1E-05 37.9 6.7 58 218-276 347-430 (433)
215 COG0627 Predicted esterase [Ge 90.8 0.13 2.8E-06 40.8 1.4 34 76-109 153-186 (316)
216 KOG2237 Predicted serine prote 90.8 0.49 1.1E-05 40.6 4.7 77 29-109 499-583 (712)
217 PLN02209 serine carboxypeptida 90.7 0.4 8.7E-06 40.1 4.3 58 218-276 351-434 (437)
218 PF08237 PE-PPE: PE-PPE domain 90.6 1.5 3.3E-05 33.0 6.9 63 29-95 2-68 (225)
219 PF09949 DUF2183: Uncharacteri 90.5 2.9 6.2E-05 26.9 7.1 89 7-105 6-97 (100)
220 KOG3967 Uncharacterized conser 89.9 2.2 4.7E-05 31.5 6.7 74 29-108 144-225 (297)
221 PF05277 DUF726: Protein of un 89.9 0.71 1.5E-05 37.1 4.8 36 74-109 219-259 (345)
222 PLN03016 sinapoylglucose-malat 89.8 0.59 1.3E-05 39.1 4.5 79 30-108 116-208 (433)
223 PF05576 Peptidase_S37: PS-10 87.2 0.17 3.7E-06 41.0 -0.1 75 30-107 89-166 (448)
224 COG2939 Carboxypeptidase C (ca 86.6 0.34 7.3E-06 40.4 1.2 80 30-109 147-235 (498)
225 KOG2112 Lysophospholipase [Lip 86.4 1.3 2.8E-05 32.4 3.9 99 2-107 9-125 (206)
226 PF05576 Peptidase_S37: PS-10 85.7 1.8 4E-05 35.4 4.8 64 208-275 343-412 (448)
227 KOG2029 Uncharacterized conser 85.1 0.81 1.8E-05 39.0 2.7 20 74-93 525-544 (697)
228 PF06850 PHB_depo_C: PHB de-po 84.0 3.3 7.2E-05 30.2 5.0 59 218-276 134-201 (202)
229 KOG2112 Lysophospholipase [Lip 82.2 2.5 5.4E-05 31.0 3.9 55 218-276 144-203 (206)
230 cd01714 ETF_beta The electron 82.0 7.6 0.00017 28.7 6.5 51 31-95 79-133 (202)
231 COG2830 Uncharacterized protei 81.3 3.2 6.9E-05 29.1 3.9 34 74-109 56-89 (214)
232 COG5153 CVT17 Putative lipase 81.2 3.6 7.8E-05 31.9 4.5 33 74-108 275-307 (425)
233 KOG4540 Putative lipase essent 81.2 3.6 7.8E-05 31.9 4.5 33 74-108 275-307 (425)
234 KOG2521 Uncharacterized conser 81.1 9.3 0.0002 30.9 7.0 63 218-280 225-293 (350)
235 COG2272 PnbA Carboxylesterase 80.7 2.3 5E-05 35.6 3.7 85 18-110 117-217 (491)
236 COG4287 PqaA PhoPQ-activated p 79.6 14 0.00031 30.0 7.4 56 218-276 329-386 (507)
237 PF00135 COesterase: Carboxyle 79.3 3.4 7.3E-05 35.7 4.5 85 18-110 149-245 (535)
238 KOG1202 Animal-type fatty acid 76.7 14 0.00031 35.2 7.5 86 8-108 2129-2217(2376)
239 PF07519 Tannase: Tannase and 75.3 3 6.6E-05 35.4 3.0 77 29-109 59-149 (474)
240 PLN00021 chlorophyllase 73.2 13 0.00029 29.7 6.0 45 218-262 189-245 (313)
241 KOG4372 Predicted alpha/beta h 72.3 2.1 4.5E-05 34.9 1.3 80 1-92 85-167 (405)
242 COG4947 Uncharacterized protei 72.2 4.2 9.1E-05 28.9 2.6 36 74-109 100-135 (227)
243 PF07519 Tannase: Tannase and 70.6 12 0.00026 31.9 5.5 63 218-280 353-430 (474)
244 PF03959 FSH1: Serine hydrolas 69.4 9 0.0002 28.6 4.1 52 51-109 85-144 (212)
245 COG1576 Uncharacterized conser 68.5 16 0.00034 25.6 4.7 50 29-94 67-117 (155)
246 PRK05579 bifunctional phosphop 67.4 49 0.0011 27.6 8.2 80 14-107 135-235 (399)
247 PRK00103 rRNA large subunit me 66.8 14 0.00031 26.1 4.4 47 30-90 68-114 (157)
248 COG0218 Predicted GTPase [Gene 65.6 6.6 0.00014 28.8 2.6 31 32-64 72-102 (200)
249 PF02590 SPOUT_MTase: Predicte 65.5 5.3 0.00012 28.1 2.1 48 29-90 67-114 (155)
250 KOG3847 Phospholipase A2 (plat 64.8 3.1 6.8E-05 32.8 0.9 31 9-43 129-159 (399)
251 smart00824 PKS_TE Thioesterase 63.4 4.4 9.6E-05 29.6 1.5 56 218-273 153-211 (212)
252 KOG1282 Serine carboxypeptidas 61.9 8.9 0.00019 32.3 3.0 60 218-277 363-448 (454)
253 TIGR00521 coaBC_dfp phosphopan 61.7 75 0.0016 26.5 8.2 80 13-107 130-232 (390)
254 PF08484 Methyltransf_14: C-me 60.1 9.5 0.00021 27.0 2.6 50 55-108 53-102 (160)
255 PF03681 UPF0150: Uncharacteri 57.4 10 0.00022 20.3 1.9 32 28-64 12-43 (48)
256 COG4188 Predicted dienelactone 55.2 6.5 0.00014 31.8 1.2 55 210-266 245-303 (365)
257 PF12242 Eno-Rase_NADH_b: NAD( 53.6 36 0.00078 20.6 3.8 22 74-95 39-60 (78)
258 PF05577 Peptidase_S28: Serine 53.5 18 0.00039 30.5 3.6 37 218-257 376-413 (434)
259 COG2939 Carboxypeptidase C (ca 52.1 24 0.00051 30.1 3.9 31 246-276 460-490 (498)
260 PF10605 3HBOH: 3HB-oligomer h 50.8 24 0.00052 30.8 3.8 34 77-110 287-321 (690)
261 PF11713 Peptidase_C80: Peptid 50.5 7.9 0.00017 27.3 0.9 52 36-87 60-116 (157)
262 KOG1200 Mitochondrial/plastidi 49.6 98 0.0021 23.0 6.1 26 9-38 22-47 (256)
263 PLN02661 Putative thiazole syn 49.4 35 0.00076 27.9 4.4 32 74-107 92-123 (357)
264 cd08769 DAP_dppA_2 Peptidase M 49.3 67 0.0015 25.1 5.7 51 218-274 147-200 (270)
265 TIGR00246 tRNA_RlmH_YbeA rRNA 48.7 40 0.00087 23.7 4.1 46 30-90 66-111 (153)
266 TIGR03131 malonate_mdcH malona 48.0 26 0.00056 27.7 3.5 30 59-94 66-95 (295)
267 PF06792 UPF0261: Uncharacteri 48.0 82 0.0018 26.3 6.3 89 12-106 15-126 (403)
268 PF10503 Esterase_phd: Esteras 46.2 21 0.00045 26.9 2.6 25 218-242 169-193 (220)
269 KOG3847 Phospholipase A2 (plat 43.1 81 0.0018 25.4 5.3 63 209-275 280-346 (399)
270 smart00827 PKS_AT Acyl transfe 42.6 32 0.00068 27.2 3.3 29 60-94 73-101 (298)
271 cd08770 DAP_dppA_3 Peptidase M 42.0 1E+02 0.0022 24.1 5.7 52 218-275 147-200 (263)
272 PRK02399 hypothetical protein; 42.0 1.5E+02 0.0032 24.9 6.8 89 12-106 17-128 (406)
273 PF03403 PAF-AH_p_II: Platelet 40.6 30 0.00066 28.6 3.0 31 3-39 107-137 (379)
274 cd08663 DAP_dppA_1 Peptidase M 40.5 1.1E+02 0.0025 23.8 5.8 52 218-275 147-201 (266)
275 COG1598 Predicted nuclease of 40.5 78 0.0017 18.9 4.0 31 28-63 14-44 (73)
276 PF00698 Acyl_transf_1: Acyl t 40.3 18 0.0004 28.9 1.7 29 59-93 74-102 (318)
277 PF08197 TT_ORF2a: pORF2a trun 39.3 25 0.00055 18.3 1.5 14 30-43 35-48 (49)
278 KOG2385 Uncharacterized conser 38.7 62 0.0013 27.9 4.3 36 74-109 446-486 (633)
279 cd01852 AIG1 AIG1 (avrRpt2-ind 38.4 1.1E+02 0.0024 22.3 5.5 17 29-45 48-64 (196)
280 PF01715 IPPT: IPP transferase 38.4 17 0.00037 28.1 1.1 34 46-83 32-65 (253)
281 PF06833 MdcE: Malonate decarb 38.1 32 0.0007 26.1 2.5 57 31-92 67-125 (234)
282 PF06289 FlbD: Flagellar prote 37.8 67 0.0015 18.4 3.2 35 242-277 23-58 (60)
283 KOG1516 Carboxylesterase and r 37.6 47 0.001 29.0 3.8 58 48-109 169-231 (545)
284 cd00281 DAP_dppA Peptidase M55 37.3 1.3E+02 0.0029 23.5 5.7 51 218-274 146-199 (265)
285 PF06309 Torsin: Torsin; Inte 36.3 1.1E+02 0.0024 20.8 4.5 60 218-277 51-116 (127)
286 PF03283 PAE: Pectinacetyleste 36.2 1.1E+02 0.0024 25.2 5.5 21 74-94 155-175 (361)
287 PRK06731 flhF flagellar biosyn 35.5 2.2E+02 0.0048 22.4 7.8 76 15-106 143-219 (270)
288 PRK13982 bifunctional SbtC-lik 34.4 3.1E+02 0.0067 23.8 8.6 78 15-108 200-304 (475)
289 PF11144 DUF2920: Protein of u 34.1 45 0.00098 27.7 2.9 38 1-43 40-79 (403)
290 PRK14729 miaA tRNA delta(2)-is 32.9 36 0.00078 27.1 2.2 32 48-83 70-101 (300)
291 COG0324 MiaA tRNA delta(2)-iso 32.1 39 0.00085 27.0 2.2 33 48-84 70-102 (308)
292 COG1582 FlgEa Uncharacterized 31.7 1.1E+02 0.0024 17.7 3.4 46 232-278 14-59 (67)
293 PHA02114 hypothetical protein 31.6 56 0.0012 20.8 2.4 22 10-35 94-115 (127)
294 PF13709 DUF4159: Domain of un 31.5 1.9E+02 0.004 21.7 5.6 39 218-256 53-91 (207)
295 COG0373 HemA Glutamyl-tRNA red 31.1 2.3E+02 0.005 23.9 6.4 57 42-107 151-209 (414)
296 TIGR00128 fabD malonyl CoA-acy 30.5 69 0.0015 25.1 3.5 20 75-94 83-102 (290)
297 PF14253 AbiH: Bacteriophage a 30.3 42 0.00091 26.0 2.2 14 74-87 234-247 (270)
298 PRK10279 hypothetical protein; 29.9 72 0.0016 25.5 3.4 22 75-96 33-54 (300)
299 TIGR03169 Nterm_to_SelD pyridi 29.9 75 0.0016 25.9 3.7 34 76-109 1-34 (364)
300 PF06500 DUF1100: Alpha/beta h 29.3 1.2E+02 0.0026 25.5 4.6 59 218-277 189-255 (411)
301 TIGR01425 SRP54_euk signal rec 29.3 2.8E+02 0.006 23.7 6.7 64 29-106 182-247 (429)
302 PF09994 DUF2235: Uncharacteri 28.7 1.2E+02 0.0025 23.9 4.3 50 50-108 71-121 (277)
303 COG3887 Predicted signaling pr 28.2 1.3E+02 0.0028 26.6 4.7 50 51-109 322-377 (655)
304 cd07225 Pat_PNPLA6_PNPLA7 Pata 28.1 79 0.0017 25.3 3.4 21 75-95 43-63 (306)
305 PF04951 Peptidase_M55: D-amin 28.1 70 0.0015 25.0 2.9 53 218-276 147-202 (265)
306 TIGR03712 acc_sec_asp2 accesso 27.9 4.1E+02 0.0088 23.1 9.3 56 35-95 321-377 (511)
307 PF00448 SRP54: SRP54-type pro 27.0 1.3E+02 0.0028 22.2 4.1 65 29-106 83-148 (196)
308 PRK14974 cell division protein 26.9 3.2E+02 0.007 22.3 6.6 64 29-106 222-287 (336)
309 TIGR02354 thiF_fam2 thiamine b 26.8 1.2E+02 0.0026 22.5 3.9 33 74-109 21-54 (200)
310 PF03572 Peptidase_S41: Peptid 26.5 43 0.00093 23.6 1.5 28 10-41 16-43 (169)
311 COG1252 Ndh NADH dehydrogenase 26.5 1.4E+02 0.0031 25.1 4.6 36 74-110 3-38 (405)
312 PF04491 Pox_T4_N: Poxvirus T4 26.2 53 0.0012 17.4 1.4 10 28-37 36-45 (46)
313 COG1092 Predicted SAM-dependen 26.1 2E+02 0.0042 24.2 5.3 17 30-46 291-307 (393)
314 PRK06193 hypothetical protein; 26.1 1.2E+02 0.0026 22.7 3.7 37 50-90 135-171 (206)
315 cd01853 Toc34_like Toc34-like 26.0 1.3E+02 0.0029 23.2 4.1 16 29-44 78-93 (249)
316 PLN02925 4-hydroxy-3-methylbut 25.7 1.3E+02 0.0028 27.2 4.3 42 30-82 630-671 (733)
317 PF07521 RMMBL: RNA-metabolisi 25.5 1.1E+02 0.0023 15.9 2.6 25 30-67 7-31 (43)
318 COG2240 PdxK Pyridoxal/pyridox 25.5 3.5E+02 0.0075 21.5 9.1 82 17-110 20-113 (281)
319 cd07212 Pat_PNPLA9 Patatin-lik 25.4 58 0.0013 26.1 2.2 17 78-94 35-51 (312)
320 PLN02840 tRNA dimethylallyltra 25.2 58 0.0013 27.4 2.2 32 48-83 88-119 (421)
321 COG1752 RssA Predicted esteras 25.0 1E+02 0.0023 24.5 3.6 22 74-95 38-59 (306)
322 cd06896 PX_PI3K_C2_gamma The p 24.8 1.8E+02 0.004 18.8 3.8 42 237-278 40-82 (101)
323 PF06961 DUF1294: Protein of u 24.7 29 0.00062 19.5 0.3 16 79-94 32-47 (55)
324 PLN02748 tRNA dimethylallyltra 24.5 67 0.0014 27.5 2.4 33 48-84 89-121 (468)
325 cd07227 Pat_Fungal_NTE1 Fungal 24.0 1.1E+02 0.0024 23.9 3.5 20 76-95 39-58 (269)
326 COG1255 Uncharacterized protei 23.8 85 0.0018 20.9 2.3 23 13-39 24-46 (129)
327 KOG0341 DEAD-box protein abstr 23.7 3.7E+02 0.0079 22.6 6.2 56 218-273 445-509 (610)
328 cd07198 Patatin Patatin-like p 23.5 1.2E+02 0.0026 21.6 3.3 21 75-95 26-46 (172)
329 PF02044 Bombesin: Bombesin-li 23.3 19 0.00041 13.6 -0.4 6 80-85 6-11 (14)
330 PRK10319 N-acetylmuramoyl-l-al 23.3 73 0.0016 25.2 2.3 16 29-45 55-70 (287)
331 PLN02752 [acyl-carrier protein 22.5 1.4E+02 0.003 24.3 3.9 19 76-94 125-143 (343)
332 COG3673 Uncharacterized conser 22.4 2.9E+02 0.0062 22.5 5.2 80 17-108 55-151 (423)
333 cd07207 Pat_ExoU_VipD_like Exo 22.1 1.3E+02 0.0027 21.9 3.3 20 76-95 28-47 (194)
334 PRK09936 hypothetical protein; 21.9 1.7E+02 0.0036 23.3 3.9 50 10-67 36-85 (296)
335 PF07992 Pyr_redox_2: Pyridine 21.8 1.1E+02 0.0024 22.1 3.0 29 76-107 1-29 (201)
336 COG0693 ThiJ Putative intracel 21.8 1E+02 0.0022 22.3 2.7 32 245-276 65-98 (188)
337 TIGR00959 ffh signal recogniti 21.6 5.1E+02 0.011 22.1 7.0 31 29-67 182-212 (428)
338 TIGR02816 pfaB_fam PfaB family 21.5 1.2E+02 0.0026 26.6 3.4 21 74-94 264-284 (538)
339 PRK09620 hypothetical protein; 21.2 1.5E+02 0.0033 22.5 3.6 33 5-41 23-55 (229)
340 PRK14194 bifunctional 5,10-met 21.1 1.9E+02 0.0042 23.2 4.2 37 57-95 144-182 (301)
341 KOG1283 Serine carboxypeptidas 21.0 1.4E+02 0.003 24.2 3.3 65 30-94 72-141 (414)
342 PRK00676 hemA glutamyl-tRNA re 20.9 4.6E+02 0.01 21.5 6.3 52 48-108 154-206 (338)
343 COG0529 CysC Adenylylsulfate k 20.8 1.1E+02 0.0024 22.3 2.6 29 4-36 30-58 (197)
344 PF10340 DUF2424: Protein of u 20.8 2.8E+02 0.006 23.1 5.1 42 218-259 302-351 (374)
345 PF04548 AIG1: AIG1 family; I 20.6 1.2E+02 0.0027 22.5 3.0 31 29-64 48-78 (212)
346 PF13728 TraF: F plasmid trans 20.3 2E+02 0.0042 21.7 4.0 38 7-47 131-168 (215)
347 PF01276 OKR_DC_1: Orn/Lys/Arg 20.0 1.8E+02 0.0039 24.6 4.0 25 74-98 82-106 (417)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.4e-35 Score=232.44 Aligned_cols=252 Identities=18% Similarity=0.254 Sum_probs=166.6
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-------CCCchHHHHHHHHHHhhCCCCCCcCC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-------MDYNADVMEKFVVDLINAPDSPVSSS 73 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~i~~l~~~~~~~ 73 (282)
||||+. +++..|+++++.|++. |+|+++|+||||.|+.+. ..|+++++++++.+++++++
T Consensus 34 llHG~~--~~~~~w~~~~~~L~~~-----~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~------ 100 (294)
T PLN02824 34 LVHGFG--GNADHWRKNTPVLAKS-----HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV------ 100 (294)
T ss_pred EECCCC--CChhHHHHHHHHHHhC-----CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc------
Confidence 578886 4567999999999988 899999999999998753 36899999999999999998
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHH
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 153 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
..+++++||||||.+++.++.++|++|+++|++++... ..... ............+...+.........+... ....
T Consensus 101 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 177 (294)
T PLN02824 101 GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLR-GLHIK-KQPWLGRPFIKAFQNLLRETAVGKAFFKSV-ATPE 177 (294)
T ss_pred CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcc-ccccc-ccchhhhHHHHHHHHHHhchhHHHHHHHhh-cCHH
Confidence 78899999999999999999999999999999997531 11100 000000000011111111111111111111 1122
Q ss_pred HHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCC
Q 023416 154 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 233 (282)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~ 233 (282)
.++..+. ..+.+...+.++..+.+............+..+... .. .......++++ ++|+++|+|++|..++
T Consensus 178 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~l~~i--~~P~lvi~G~~D~~~~ 249 (294)
T PLN02824 178 TVKNILC-QCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISY-SG----GPLPEELLPAV--KCPVLIAWGEKDPWEP 249 (294)
T ss_pred HHHHHHH-HhccChhhccHHHHHHHHhccCCchHHHHHHHHhcc-cc----ccchHHHHhhc--CCCeEEEEecCCCCCC
Confidence 2222222 223233334444444332211111111111111111 11 11134567788 9999999999999999
Q ss_pred HHHHHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 234 KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
.+.++.+.+..++.++++++++ |+++.|+|++|++.|.+|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 250 VELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred hHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999888888999999998 999999999999999999975
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-33 Score=226.43 Aligned_cols=254 Identities=18% Similarity=0.280 Sum_probs=165.3
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
||||+. +++..|+++++.|++. |+|+++|+||||.|+.+. ..|+++++++++.+++++++ ..+++|
T Consensus 93 llHG~~--~~~~~w~~~~~~L~~~-----~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~------~~~~~l 159 (360)
T PLN02679 93 LVHGFG--ASIPHWRRNIGVLAKN-----YTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVV------QKPTVL 159 (360)
T ss_pred EECCCC--CCHHHHHHHHHHHhcC-----CEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhc------CCCeEE
Confidence 578886 4678999999999876 999999999999998864 57899999999999999987 678999
Q ss_pred EcccHHHHHHHHHHH-hCCCcccceeeecCCCCCCCCccccCCCchhh-hh---hhhhhhhcCcchhhhHHhhhhhcHHH
Q 023416 80 FGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET-RY---GLLRGTLRAPGVGWMMYNMLVSNEKA 154 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~-~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
+||||||.+++.++. .+|++|+++|++++......+.... ..... .. ..+..+...+.....++... .....
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 236 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVD--DWRIKLLLPLLWLIDFLLKQRGIASALFNRV-KQRDN 236 (360)
T ss_pred EEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccc--hHHHhhhcchHHHHHHHhhchhhHHHHHHHh-cCHHH
Confidence 999999999998886 5799999999999753211100000 00000 00 00011111111111111111 11222
Q ss_pred HHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCH
Q 023416 155 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 234 (282)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~ 234 (282)
++..+. ..+.+...+.++..+.+............+..+....... +....++++ ++|+|+|+|++|..+|.
T Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i--~~PtLii~G~~D~~~p~ 308 (360)
T PLN02679 237 LKNILL-SVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGP-----NPIKLIPRI--SLPILVLWGDQDPFTPL 308 (360)
T ss_pred HHHHHH-HhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCC-----CHHHHhhhc--CCCEEEEEeCCCCCcCc
Confidence 333222 2233334455555544432222222212222222111111 134567788 99999999999999887
Q ss_pred HH-----HHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhc
Q 023416 235 AE-----MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 235 ~~-----~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
+. .+.+.+.++++++++++++ |++++|+|++|++.|.+||.+..
T Consensus 309 ~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 309 DGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred hhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 63 3456677899999999999 99999999999999999998754
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4e-33 Score=218.65 Aligned_cols=252 Identities=17% Similarity=0.181 Sum_probs=161.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
||||+. ++...|+.+++.|++. |+||++|+||||.|+.+...|+++++++|+.+++++++ ..+++++
T Consensus 32 llHG~~--~~~~~w~~~~~~L~~~-----~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~------~~~~~lv 98 (295)
T PRK03592 32 FLHGNP--TSSYLWRNIIPHLAGL-----GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG------LDDVVLV 98 (295)
T ss_pred EECCCC--CCHHHHHHHHHHHhhC-----CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------CCCeEEE
Confidence 578875 5778999999999998 79999999999999987777999999999999999998 6899999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
||||||.+|+.++.++|++|+++|++++... +. ...... ....... ..+..+..+..+.. .....+...+.
T Consensus 99 GhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~-~~-~~~~~~---~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~ 169 (295)
T PRK03592 99 GHDWGSALGFDWAARHPDRVRGIAFMEAIVR-PM-TWDDFP---PAVRELF-QALRSPGEGEEMVL---EENVFIERVLP 169 (295)
T ss_pred EECHHHHHHHHHHHhChhheeEEEEECCCCC-Cc-chhhcc---hhHHHHH-HHHhCccccccccc---chhhHHhhccc
Confidence 9999999999999999999999999997321 10 000000 0000111 11111111111000 00111111111
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCC------CCHHHHHHHhhcccCCccEEEEecCCCCCCCH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPV------NSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 234 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~ 234 (282)
.... ...+++....+......+........+........ ....+....+.++ ++|+++|+|++|..++.
T Consensus 170 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~lii~G~~D~~~~~ 244 (295)
T PRK03592 170 GSIL---RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATS--DVPKLLINAEPGAILTT 244 (295)
T ss_pred Cccc---ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccC--CCCeEEEeccCCcccCc
Confidence 1111 12334433333332222222222211111110000 0111234556777 99999999999999944
Q ss_pred -HHHHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhcC
Q 023416 235 -AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 279 (282)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~~ 279 (282)
...+.+.+..+++++++++++ |+++.|+|++|++.|.+|+.+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 245 GAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred HHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 444444566788999999998 999999999999999999987653
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=3.8e-33 Score=216.66 Aligned_cols=239 Identities=14% Similarity=0.141 Sum_probs=158.0
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
|+||+. +++..|+.+++.|++. |+|+++|+||||.|+.+...++++++++++.+++++++ ..+++|+
T Consensus 30 llHG~~--~~~~~w~~~~~~L~~~-----~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~------~~~~~Lv 96 (276)
T TIGR02240 30 IFNGIG--ANLELVFPFIEALDPD-----LEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD------YGQVNAI 96 (276)
T ss_pred EEeCCC--cchHHHHHHHHHhccC-----ceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC------cCceEEE
Confidence 578875 4556899999999887 99999999999999887677899999999999999997 5789999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
||||||.+++.++.++|++|+++|++++........ . . . ..... ...+ ........ ........
T Consensus 97 G~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~----~--~-~~~~~-~~~~--~~~~~~~~--~~~~~~~~-- 160 (276)
T TIGR02240 97 GVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVP--G----K--P-KVLMM-MASP--RRYIQPSH--GIHIAPDI-- 160 (276)
T ss_pred EECHHHHHHHHHHHHCHHHhhheEEeccCCccccCC--C----c--h-hHHHH-hcCc--hhhhcccc--ccchhhhh--
Confidence 999999999999999999999999999853211000 0 0 0 00000 0000 00000000 00000000
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 240 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~ 240 (282)
+.......++........................ .... ..+.++++ ++|+++|+|++|++++.+..+.+
T Consensus 161 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~l~~i--~~P~lii~G~~D~~v~~~~~~~l 229 (276)
T TIGR02240 161 ---YGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAG-LGWT-----SIHWLHKI--QQPTLVLAGDDDPIIPLINMRLL 229 (276)
T ss_pred ---ccceeeccchhhhhhhhhcccCCCchHHHHHHHH-cCCc-----hhhHhhcC--CCCEEEEEeCCCCcCCHHHHHHH
Confidence 0000001111111111111111110111111111 1110 23557788 99999999999999999999999
Q ss_pred HhccCCceEEEeCCcccCCCCChHHHHHHHHHHHHhhcC
Q 023416 241 KGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTFE 279 (282)
Q Consensus 241 ~~~~~~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~~~~~ 279 (282)
.+.+++++++++++||+++.|+|+++++.|.+|+++...
T Consensus 230 ~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 230 AWRIPNAELHIIDDGHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred HHhCCCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhhh
Confidence 999999999999877999999999999999999988653
No 5
>PLN02578 hydrolase
Probab=100.00 E-value=2.1e-32 Score=218.89 Aligned_cols=255 Identities=20% Similarity=0.253 Sum_probs=166.1
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
|+||+.. ++..|+.+++.|++. |+|+++|+||||.|+++...|+.+.+++++.++++.+. ..+++++
T Consensus 91 liHG~~~--~~~~w~~~~~~l~~~-----~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~------~~~~~lv 157 (354)
T PLN02578 91 LIHGFGA--SAFHWRYNIPELAKK-----YKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV------KEPAVLV 157 (354)
T ss_pred EECCCCC--CHHHHHHHHHHHhcC-----CEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc------cCCeEEE
Confidence 5788864 578999999999886 99999999999999988778999999999999999987 6889999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhh-hhhhhhhhhcCc---chhh----hHHhhhhhcH
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET-RYGLLRGTLRAP---GVGW----MMYNMLVSNE 152 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~----~~~~~~~~~~ 152 (282)
|||+||.+++.++.++|++|+++|++++......+. ........ ...........+ .... ..+.. ...+
T Consensus 158 G~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (354)
T PLN02578 158 GNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSES--REKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQ-AKQP 234 (354)
T ss_pred EECHHHHHHHHHHHhChHhcceEEEECCCccccccc--cccccccccccchhhHHHhHHHHHHHHHHHHHHHHHH-hcCH
Confidence 999999999999999999999999998743211000 00000000 000000000000 0000 00000 0112
Q ss_pred HHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCC
Q 023416 153 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 232 (282)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~ 232 (282)
..++... ...+.+...+++...+........+.....+...+....... ......+.++++ ++|+++|+|++|.++
T Consensus 235 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i--~~PvLiI~G~~D~~v 310 (354)
T PLN02578 235 SRIESVL-KSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQ-SRYTLDSLLSKL--SCPLLLLWGDLDPWV 310 (354)
T ss_pred HHHHHHH-HHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCC-CCCCHHHHhhcC--CCCEEEEEeCCCCCC
Confidence 2222221 123333333444444433322222222222222222111100 111145677888 999999999999999
Q ss_pred CHHHHHHHHhccCCceEEEeCCcccCCCCChHHHHHHHHHHHH
Q 023416 233 SKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~ 275 (282)
+.+..+.+++..++.+++++++||+++.|+|++|++.|.+|++
T Consensus 311 ~~~~~~~l~~~~p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 311 GPAKAEKIKAFYPDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999999999964499999999999999999985
No 6
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=2.3e-32 Score=209.79 Aligned_cols=241 Identities=12% Similarity=0.037 Sum_probs=154.3
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
|+||+. .+...|+.+++.|++. ||+|+++|+||||.|+.+. ..++++++++|+.+++++++. +.++++
T Consensus 8 llHG~~--~~~~~w~~~~~~L~~~----~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~~l 76 (255)
T PLN02965 8 FVHGAS--HGAWCWYKLATLLDAA----GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP-----DHKVIL 76 (255)
T ss_pred EECCCC--CCcCcHHHHHHHHhhC----CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC-----CCCEEE
Confidence 578887 4567899999999765 6999999999999998654 468999999999999999872 359999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhh--hcCcchhhhHHhhhhhcHHHHH-
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT--LRAPGVGWMMYNMLVSNEKAIQ- 156 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 156 (282)
+||||||.+++.++.++|++|+++|++++....+ ... . ........... ............. ......+
T Consensus 77 vGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 148 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKP--GSI---I-SPRLKNVMEGTEKIWDYTFGEGPDKP--PTGIMMKP 148 (255)
T ss_pred EecCcchHHHHHHHHhCchheeEEEEEccccCCC--CCC---c-cHHHHhhhhccccceeeeeccCCCCC--cchhhcCH
Confidence 9999999999999999999999999998742111 000 0 00000000000 0000000000000 0000000
Q ss_pred HHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHH
Q 023416 157 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 236 (282)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~ 236 (282)
.......+. ..+.+...... ....+.....+.. ..+....+..+ ++|+++|+|++|..++++.
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~i--~vP~lvi~g~~D~~~~~~~ 211 (255)
T PLN02965 149 EFVRHYYYN---QSPLEDYTLSS-KLLRPAPVRAFQD-----------LDKLPPNPEAE--KVPRVYIKTAKDNLFDPVR 211 (255)
T ss_pred HHHHHHHhc---CCCHHHHHHHH-HhcCCCCCcchhh-----------hhhccchhhcC--CCCEEEEEcCCCCCCCHHH
Confidence 001011111 11111111111 1111111111100 00112234456 9999999999999999999
Q ss_pred HHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 237 MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
.+.+.+.++++++++++++ |+++.|+|++|++.|.+|++..
T Consensus 212 ~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 212 QDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999998 9999999999999999998864
No 7
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-32 Score=204.83 Aligned_cols=256 Identities=17% Similarity=0.170 Sum_probs=165.2
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--CCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
||+|+. .+|++|+.+++.|+.+ ||||+|+|+||+|.|+.|. ..||+..++.|+..++++++ ..+++
T Consensus 49 llHGfP--e~wyswr~q~~~la~~----~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg------~~k~~ 116 (322)
T KOG4178|consen 49 LLHGFP--ESWYSWRHQIPGLASR----GYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG------LKKAF 116 (322)
T ss_pred EEccCC--ccchhhhhhhhhhhhc----ceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc------cceeE
Confidence 467776 5889999999999998 8999999999999999976 68999999999999999999 78999
Q ss_pred EEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhh-hhhhhhhcCcchhhhHHhhhhhcHHHHHH
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRY-GLLRGTLRAPGVGWMMYNMLVSNEKAIQS 157 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
++||+||+++|..++..+|++|+++|.++.... .|............. ....-.+..+......+... ..+.....
T Consensus 117 lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~-~~~~~~~~ 193 (322)
T KOG4178|consen 117 LVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKD-DTEMLVKT 193 (322)
T ss_pred EEeccchhHHHHHHHHhChhhcceEEEecCCCC--CcccchhhhhccccCccceeEeccccCcchhhhccc-hhHHhHHh
Confidence 999999999999999999999999999986432 111100000000011 11111122222222222111 01111111
Q ss_pred HHhhccc----cC------CCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecC
Q 023416 158 QYKSHVY----SN------PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTE 227 (282)
Q Consensus 158 ~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~ 227 (282)
+...... .+ +...+++.++.+...+...+ -.....+.+.+... .+.....+.++ ++|+++|+|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g-~~gplNyyrn~~r~---w~a~~~~~~~i--~iPv~fi~G~ 267 (322)
T KOG4178|consen 194 FRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDG-FTGPLNYYRNFRRN---WEAAPWALAKI--TIPVLFIWGD 267 (322)
T ss_pred hhccccCCccccCCCCCCccchhhHHHHHHHHhcccccc-ccccchhhHHHhhC---chhcccccccc--ccceEEEEec
Confidence 1111111 00 11233444444443332222 11111111111111 00123445566 9999999999
Q ss_pred CCCCCCHH-HHHHHHhccCCc-eEEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 228 GSPRRSKA-EMEALKGAKGVT-KFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 228 ~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
+|.+.+.. ..+.+++..++. +.++++++ |+++.|+|++|++.|.+|+++.
T Consensus 268 ~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 268 LDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred CcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 99987765 566677777776 67888998 9999999999999999999874
No 8
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.5e-31 Score=209.08 Aligned_cols=240 Identities=14% Similarity=0.149 Sum_probs=152.3
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--CCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
|+||+. +++..|..+++.|++. ||+|+++|+||||.|+.+. ..|+++++++++.+++++++ ..+++
T Consensus 51 liHG~~--~~~~~w~~~~~~L~~~----gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~------~~~v~ 118 (302)
T PRK00870 51 LLHGEP--SWSYLYRKMIPILAAA----GHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLD------LTDVT 118 (302)
T ss_pred EECCCC--CchhhHHHHHHHHHhC----CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcC------CCCEE
Confidence 578875 5677899999999876 7999999999999998754 46899999999999999987 67899
Q ss_pred EEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHH
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 158 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (282)
++||||||.+|+.++.++|++|+++|++++........ .......+.......+. ......
T Consensus 119 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-------------~~~~~~ 179 (302)
T PRK00870 119 LVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP------MPDAFWAWRAFSQYSPV-------------LPVGRL 179 (302)
T ss_pred EEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc------chHHHhhhhcccccCch-------------hhHHHH
Confidence 99999999999999999999999999998742110000 00000000000000000 000000
Q ss_pred HhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHH---hhccC-CC-CCCHHHHHHHhhcccCCccEEEEecCCCCCCC
Q 023416 159 YKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAF---LTGLL-DP-VNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 233 (282)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~-~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~ 233 (282)
...... ....++....+...............+ ..... .. ..........+.++ ++|+++|+|++|+.++
T Consensus 180 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~lii~G~~D~~~~ 254 (302)
T PRK00870 180 VNGGTV---RDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERW--DKPFLTAFSDSDPITG 254 (302)
T ss_pred hhcccc---ccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcC--CCceEEEecCCCCccc
Confidence 000000 011222221111000000000000000 00000 00 00111234556777 9999999999999998
Q ss_pred HHHHHHHHhccCCce---EEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 234 KAEMEALKGAKGVTK---FVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 234 ~~~~~~~~~~~~~~~---~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
.+. +.+.+.+++.+ +++++++ |++++|+|++|++.|.+|+++.
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 255 GGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred Cch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 766 77888888776 8899998 9999999999999999999763
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.98 E-value=4e-31 Score=205.69 Aligned_cols=244 Identities=14% Similarity=0.166 Sum_probs=149.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
||||+. .++..|+.+++.|.+. |+|+++|+||||.|+.+. ..++.+++++++.+++++++ ..++++
T Consensus 39 ~lHG~~--~~~~~~~~~~~~l~~~-----~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l 105 (286)
T PRK03204 39 LCHGNP--TWSFLYRDIIVALRDR-----FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLG------LDRYLS 105 (286)
T ss_pred EECCCC--ccHHHHHHHHHHHhCC-----cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhC------CCCEEE
Confidence 578886 4567899999999876 999999999999998764 46899999999999999987 678999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHH
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQY 159 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
+||||||.+++.++..+|++|+++|++++.... ... . .................... ......+++
T Consensus 106 vG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~-~~~------~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 171 (286)
T PRK03204 106 MGQDWGGPISMAVAVERADRVRGVVLGNTWFWP-ADT------L---AMKAFSRVMSSPPVQYAILR----RNFFVERLI 171 (286)
T ss_pred EEECccHHHHHHHHHhChhheeEEEEECccccC-CCc------h---hHHHHHHHhccccchhhhhh----hhHHHHHhc
Confidence 999999999999999999999999998764210 000 0 00000000000000000000 001111111
Q ss_pred hhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCH-HHHH
Q 023416 160 KSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK-AEME 238 (282)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~-~~~~ 238 (282)
... . ....+++....+......+.....................+....+.+..+++|+++|+|++|..+++ ...+
T Consensus 172 ~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~ 248 (286)
T PRK03204 172 PAG-T--EHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILP 248 (286)
T ss_pred ccc-c--cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHH
Confidence 111 0 01223322222211111111111111100000000000011111111111279999999999998754 4678
Q ss_pred HHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHH
Q 023416 239 ALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 274 (282)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl 274 (282)
.+.+.+++.++++++++ |++++|+|++|++.|.+||
T Consensus 249 ~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 249 RLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 88999999999999999 9999999999999999997
No 10
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.98 E-value=1.5e-30 Score=200.07 Aligned_cols=235 Identities=13% Similarity=0.101 Sum_probs=148.2
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
||||+. +++..|+++++.|.+. |+|+++|+||||.|+.+. .++++++++++.+ +. ..+++++
T Consensus 18 llHG~~--~~~~~w~~~~~~L~~~-----~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~~----~~------~~~~~lv 79 (256)
T PRK10349 18 LLHGWG--LNAEVWRCIDEELSSH-----FTLHLVDLPGFGRSRGFG-ALSLADMAEAVLQ----QA------PDKAIWL 79 (256)
T ss_pred EECCCC--CChhHHHHHHHHHhcC-----CEEEEecCCCCCCCCCCC-CCCHHHHHHHHHh----cC------CCCeEEE
Confidence 578875 5678999999999987 999999999999998653 5788887777654 33 4689999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
||||||.+++.++.++|++|+++|++++.... ......... .......+.. .+... .....+.++.
T Consensus 80 GhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~--~~~~~~~~~---~~~~~~~~~~------~~~~~---~~~~~~~~~~ 145 (256)
T PRK10349 80 GWSLGGLVASQIALTHPERVQALVTVASSPCF--SARDEWPGI---KPDVLAGFQQ------QLSDD---FQRTVERFLA 145 (256)
T ss_pred EECHHHHHHHHHHHhChHhhheEEEecCccce--ecCCCCCcc---cHHHHHHHHH------HHHhc---hHHHHHHHHH
Confidence 99999999999999999999999999874211 000000000 0000000000 00000 0011111111
Q ss_pred hccccCCCCCChHHHHHHHHHHhh-cCCCc-chHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKR-KGARY-VPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEME 238 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~ 238 (282)
...+. ......+.. ........ ..... ........... .+..+.++++ ++|+++|+|++|.+++.+..+
T Consensus 146 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~ 216 (256)
T PRK10349 146 LQTMG-TETARQDAR-ALKKTVLALPMPEVDVLNGGLEILKT-----VDLRQPLQNV--SMPFLRLYGYLDGLVPRKVVP 216 (256)
T ss_pred HHHcc-CchHHHHHH-HHHHHhhccCCCcHHHHHHHHHHHHh-----CccHHHHhhc--CCCeEEEecCCCccCCHHHHH
Confidence 11111 111111111 11111111 10000 00101111111 1145677788 999999999999999999999
Q ss_pred HHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 239 ALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
.+.+.++++++++++++ |+++.|+|++|++.|.+|-.+
T Consensus 217 ~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 217 MLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred HHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 99999999999999999 999999999999999998543
No 11
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=8.6e-30 Score=198.83 Aligned_cols=242 Identities=17% Similarity=0.156 Sum_probs=149.7
Q ss_pred CCCcccCcccccchH---HHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCC-CchHHHHHHHHHHhhCCCCCCcCCCCc
Q 023416 1 MIPTISDVSTVEEWR---LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD-YNADVMEKFVVDLINAPDSPVSSSESD 76 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~---~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~l~~~i~~l~~~~~~~~~~ 76 (282)
||||+.. +...|. +.+..|.+. ||+|+++|+||||.|+.+... .....+++++.++++.++ ..+
T Consensus 35 llHG~~~--~~~~~~~~~~~~~~l~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~------~~~ 102 (282)
T TIGR03343 35 MLHGGGP--GAGGWSNYYRNIGPFVDA----GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALD------IEK 102 (282)
T ss_pred EECCCCC--chhhHHHHHHHHHHHHhC----CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcC------CCC
Confidence 5788753 233444 445566665 799999999999999875321 122256889999999998 678
Q ss_pred eEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHH
Q 023416 77 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 156 (282)
Q Consensus 77 ~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
++++||||||.+++.++.++|++++++|+++|..... ....... . ............+ ......
T Consensus 103 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~~~-~-~~~~~~~~~~~~~------------~~~~~~ 166 (282)
T TIGR03343 103 AHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGP--SLFAPMP-M-EGIKLLFKLYAEP------------SYETLK 166 (282)
T ss_pred eeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCc--cccccCc-h-HHHHHHHHHhcCC------------CHHHHH
Confidence 9999999999999999999999999999998742110 0000000 0 0000000000000 011111
Q ss_pred HHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHH
Q 023416 157 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 236 (282)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~ 236 (282)
.......+ +....+++..+..+..... . ......+............+....++++ ++|+++++|++|..++.+.
T Consensus 167 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlli~G~~D~~v~~~~ 241 (282)
T TIGR03343 167 QMLNVFLF-DQSLITEELLQGRWENIQR-Q-PEHLKNFLISSQKAPLSTWDVTARLGEI--KAKTLVTWGRDDRFVPLDH 241 (282)
T ss_pred HHHhhCcc-CcccCcHHHHHhHHHHhhc-C-HHHHHHHHHhccccccccchHHHHHhhC--CCCEEEEEccCCCcCCchh
Confidence 11111111 2222333332221111100 0 0001111111000000111245667788 9999999999999999999
Q ss_pred HHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 237 MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
.+.+.+..+++++++++++ |+++.|+|++|++.|.+||.
T Consensus 242 ~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 242 GLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999999999999999998 99999999999999999996
No 12
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=1.5e-29 Score=201.62 Aligned_cols=243 Identities=17% Similarity=0.205 Sum_probs=155.5
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCC----CCchHHHHHHHHHHhhCCCCCCcCCCCc
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM----DYNADVMEKFVVDLINAPDSPVSSSESD 76 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~l~~~i~~l~~~~~~~~~~ 76 (282)
||||+. ++...|+++++.|++. |+||++|+||||.|+.+.. .|+++++++++.+++++++ ..+
T Consensus 132 llHG~~--~~~~~w~~~~~~L~~~-----~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~------~~~ 198 (383)
T PLN03084 132 LIHGFP--SQAYSYRKVLPVLSKN-----YHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK------SDK 198 (383)
T ss_pred EECCCC--CCHHHHHHHHHHHhcC-----CEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC------CCC
Confidence 578886 5678999999999875 9999999999999988642 6899999999999999998 578
Q ss_pred eEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHH
Q 023416 77 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 156 (282)
Q Consensus 77 ~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
++|+|||+||.+++.++.++|++|+++|+++|..... . . ........+.... .. .++... ......
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~--~--~---~~p~~l~~~~~~l----~~-~~~~~~--~~~~~~ 264 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKE--H--A---KLPSTLSEFSNFL----LG-EIFSQD--PLRASD 264 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccc--c--c---cchHHHHHHHHHH----hh-hhhhcc--hHHHHh
Confidence 9999999999999999999999999999999853110 0 0 0000000000000 00 000000 000000
Q ss_pred HHHhhccccCCCCCChHHHHHHHHHHhhcCCCc-chHHHhhccCCCC-CCHHHHHHHh--hcccCCccEEEEecCCCCCC
Q 023416 157 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARY-VPAAFLTGLLDPV-NSREEFLQLF--ADLEGKLPLLVVSTEGSPRR 232 (282)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~l--~~i~~~~P~lii~G~~D~~~ 232 (282)
..+.. . ......++....+......++... ....+...+.... ...++....+ +++ ++|+++|+|++|.++
T Consensus 265 ~~~~~--~-~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i--~vPvLiI~G~~D~~v 339 (383)
T PLN03084 265 KALTS--C-GPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNW--KTPITVCWGLRDRWL 339 (383)
T ss_pred hhhcc--c-CccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccC--CCCEEEEeeCCCCCc
Confidence 11110 0 111233333333332222222111 1111111111110 0111122222 345 899999999999999
Q ss_pred CHHHHHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 233 SKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
+.+..+.+.+. .+.++++++++ |++++|+|+++++.|.+|+.+
T Consensus 340 ~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 340 NYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred CHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 99988888876 47899999998 999999999999999999863
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=1.6e-29 Score=196.94 Aligned_cols=244 Identities=15% Similarity=0.179 Sum_probs=154.6
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCC-CCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
++||++ .+...|+.+++.|++. |+|+++|+||||.|+.+.. .++++++++++.+++++++ ..++++
T Consensus 33 ~~hG~~--~~~~~~~~~~~~l~~~-----~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~------~~~~~l 99 (278)
T TIGR03056 33 LLHGTG--ASTHSWRDLMPPLARS-----FRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEG------LSPDGV 99 (278)
T ss_pred EEcCCC--CCHHHHHHHHHHHhhC-----cEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcC------CCCceE
Confidence 478875 4677899999999876 9999999999999987654 7899999999999999887 578899
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHH
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQY 159 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
+||||||.+++.++.++|++++++|++++... ......... . ..........+.......... ..........
T Consensus 100 vG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~-~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 172 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPVTPRMVVGINAALM-PFEGMAGTL--F---PYMARVLACNPFTPPMMSRGA-ADQQRVERLI 172 (278)
T ss_pred EEECccHHHHHHHHHhCCcccceEEEEcCccc-ccccccccc--c---chhhHhhhhcccchHHHHhhc-ccCcchhHHh
Confidence 99999999999999999999999999987421 111000000 0 000000000011000000000 0011111111
Q ss_pred hhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHH
Q 023416 160 KSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEA 239 (282)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~ 239 (282)
... ....++.....+.................... ........++++ ++|+++|+|++|..++.+..+.
T Consensus 173 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i--~~P~lii~g~~D~~vp~~~~~~ 241 (278)
T TIGR03056 173 RDT----GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQW-----DLAPLNRDLPRI--TIPLHLIAGEEDKAVPPDESKR 241 (278)
T ss_pred hcc----ccccccchhhHHHHhhcCchhhhHHHHHhhcc-----cccchhhhcccC--CCCEEEEEeCCCcccCHHHHHH
Confidence 100 00111111111111110000000011111110 011134556777 9999999999999999999999
Q ss_pred HHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 240 LKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 240 ~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
+.+..++.++++++++ |+++.|+|+++++.|.+|++
T Consensus 242 ~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 242 AATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9998999999999998 99999999999999999984
No 14
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=3.1e-30 Score=201.22 Aligned_cols=254 Identities=20% Similarity=0.261 Sum_probs=158.2
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCC-CCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS-DRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S-~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
+||||.+ +...|+++++.|++. .|++|+++|++|||.| ..+. ..|+..++++.+..++.... ..+++
T Consensus 63 llHGF~~--~~~~w~~~~~~L~~~---~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~------~~~~~ 131 (326)
T KOG1454|consen 63 LLHGFGA--SSFSWRRVVPLLSKA---KGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVF------VEPVS 131 (326)
T ss_pred EeccccC--CcccHhhhccccccc---cceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhc------CcceE
Confidence 5789985 889999999999997 3599999999999944 4444 55999999999999999888 77899
Q ss_pred EEcccHHHHHHHHHHHhCCCccccee---eecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHH
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIA---AVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 155 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lv---l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (282)
++|||+||.+|..+|..+|+.|++++ ++++..... + .........+..+............. ......
T Consensus 132 lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~ 202 (326)
T KOG1454|consen 132 LVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYST-P------KGIKGLRRLLDKFLSALELLIPLSLT--EPVRLV 202 (326)
T ss_pred EEEeCcHHHHHHHHHHhCcccccceeeecccccccccC-C------cchhHHHHhhhhhccHhhhcCccccc--cchhhe
Confidence 99999999999999999999999999 555532110 0 00000111111111000000000000 000000
Q ss_pred HHHH-h--hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCC
Q 023416 156 QSQY-K--SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 232 (282)
Q Consensus 156 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~ 232 (282)
.... . ...+.+.....+...............+.....+...... +.+.....++++. +||+++++|++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~-~~pvlii~G~~D~~~ 278 (326)
T KOG1454|consen 203 SEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLG---FDENLLSLIKKIW-KCPVLIIWGDKDQIV 278 (326)
T ss_pred eHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccC---ccchHHHhhcccc-CCceEEEEcCcCCcc
Confidence 0000 0 0111111111111111111100000111111111111111 0122455566661 499999999999999
Q ss_pred CHHHHHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhc
Q 023416 233 SKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
|.+.++.+.+..|+++++++++| |.+|+|+|+++++.|..|+.+..
T Consensus 279 p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 279 PLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred CHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 99999999988899999999998 99999999999999999998753
No 15
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=7e-29 Score=186.52 Aligned_cols=255 Identities=11% Similarity=0.108 Sum_probs=154.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCC----CCchHHHHHHHHHHhhCCCCCCcCCCCc
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM----DYNADVMEKFVVDLINAPDSPVSSSESD 76 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~l~~~i~~l~~~~~~~~~~ 76 (282)
||||++ ++...|-..++.|++. ++|+++|++|+|+|++|.. ..-...+++-+++.-...+ ..+
T Consensus 95 liHGyG--Ag~g~f~~Nf~~La~~-----~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~------L~K 161 (365)
T KOG4409|consen 95 LIHGYG--AGLGLFFRNFDDLAKI-----RNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMG------LEK 161 (365)
T ss_pred EEeccc--hhHHHHHHhhhhhhhc-----CceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcC------Ccc
Confidence 578886 5678899999999997 9999999999999999862 2234567888888888888 679
Q ss_pred eEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhh-hhhhhhhhhc--CcchhhhHHhhhhh-cH
Q 023416 77 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET-RYGLLRGTLR--APGVGWMMYNMLVS-NE 152 (282)
Q Consensus 77 ~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~-~~ 152 (282)
.+|+|||+||.+|..||.++|++|++|||++|.+...-+.. +..... ...+++.... .....-.+.+.+.+ -+
T Consensus 162 milvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~---~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp 238 (365)
T KOG4409|consen 162 MILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDS---EPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGP 238 (365)
T ss_pred eeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCc---chhhcCCChHHHhhhhhhhhcCCHHHHHHhccccch
Confidence 99999999999999999999999999999999643221100 000000 1111110000 00000000000000 01
Q ss_pred HHHHHHHhhcccc-CCCCCChHHHHHHHHH-H-hhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCC
Q 023416 153 KAIQSQYKSHVYS-NPDNVTPGIVESRYAL-T-KRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGS 229 (282)
Q Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D 229 (282)
....++ ....+. -+....++.+-.+... . .++....++..++..... ....+.+.+..++.+||+++|+|++|
T Consensus 239 ~Lv~~~-~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~---Ar~Pm~~r~~~l~~~~pv~fiyG~~d 314 (365)
T KOG4409|consen 239 KLVSRL-RPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGW---ARRPMIQRLRELKKDVPVTFIYGDRD 314 (365)
T ss_pred HHHhhh-hHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccch---hhhhHHHHHHhhccCCCEEEEecCcc
Confidence 111111 111111 1123344443333222 2 122333334333322211 22335566666634599999999999
Q ss_pred CCCCHHHHHHHHh--ccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 230 PRRSKAEMEALKG--AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 230 ~~~~~~~~~~~~~--~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
-+-. ....++.+ ....++.++++++ |.+..|+|+.|++.|..+++.
T Consensus 315 WmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 315 WMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred cccc-hhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 5433 33444433 3455789999999 999999999999999999875
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=3.6e-29 Score=192.52 Aligned_cols=233 Identities=13% Similarity=0.122 Sum_probs=149.8
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
++||+. ++...|..+++.|++. |+|+++|+||||.|..+ ..++++++++|+.+++++++ ..+++++
T Consensus 21 ~lhG~~--~~~~~~~~~~~~l~~~-----~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~------~~~~~lv 86 (255)
T PRK10673 21 LVHGLF--GSLDNLGVLARDLVND-----HDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQ------IEKATFI 86 (255)
T ss_pred EECCCC--CchhHHHHHHHHHhhC-----CeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcC------CCceEEE
Confidence 467875 4557899999999886 99999999999999875 45899999999999999987 5779999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
||||||.+++.++.++|++|+++|++++....... .........+...... .. .........+.
T Consensus 87 GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~------~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~ 150 (255)
T PRK10673 87 GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV------RRHDEIFAAINAVSEA---------GA-TTRQQAAAIMR 150 (255)
T ss_pred EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc------hhhHHHHHHHHHhhhc---------cc-ccHHHHHHHHH
Confidence 99999999999999999999999999753111000 0000000000000000 00 00000011111
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 240 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~ 240 (282)
.. .............................+.. ....+.++++ ++|+++|+|++|+.++.+..+.+
T Consensus 151 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~P~l~i~G~~D~~~~~~~~~~~ 217 (255)
T PRK10673 151 QH------LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-----IVGWEKIPAW--PHPALFIRGGNSPYVTEAYRDDL 217 (255)
T ss_pred Hh------cCCHHHHHHHHhcCCcceeEeeHHHHHHhHHH-----HhCCcccCCC--CCCeEEEECCCCCCCCHHHHHHH
Confidence 00 00011111111110000000000000000000 0001234556 89999999999999999999999
Q ss_pred HhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 241 KGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 241 ~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
.+..+++++++++++ |+++.|+|+++++.|.+||.+
T Consensus 218 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 218 LAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred HHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999999999999 999999999999999999975
No 17
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=1.5e-28 Score=199.60 Aligned_cols=254 Identities=14% Similarity=0.147 Sum_probs=150.9
Q ss_pred CCCcccCcccccchHH-HHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHH-HHhhCCCCCCcCCCCce
Q 023416 1 MIPTISDVSTVEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVV-DLINAPDSPVSSSESDL 77 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~-~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~-~~i~~l~~~~~~~~~~~ 77 (282)
|+||+. ++...|.. +++.|++.. +.+|+|+++|+||||.|+.+. ..|+++++++++. .++++++ ..++
T Consensus 206 LlHG~~--~s~~~W~~~~~~~L~~~~-~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg------~~k~ 276 (481)
T PLN03087 206 FIHGFI--SSSAFWTETLFPNFSDAA-KSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYK------VKSF 276 (481)
T ss_pred EECCCC--ccHHHHHHHHHHHHHHHh-hCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcC------CCCE
Confidence 578886 45578885 557776410 016999999999999998764 5689999999995 8999987 6789
Q ss_pred EEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcC---c--chhhhHHhhhhhcH
Q 023416 78 VIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA---P--GVGWMMYNMLVSNE 152 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~ 152 (282)
+++||||||.+++.++.++|++|+++|+++|+.. ..+. + ... ........... + ..+...........
T Consensus 277 ~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~-~~~~--~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 349 (481)
T PLN03087 277 HIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY-PVPK--G---VQA-TQYVMRKVAPRRVWPPIAFGASVACWYEHIS 349 (481)
T ss_pred EEEEECHHHHHHHHHHHhChHhccEEEEECCCcc-cccc--c---hhH-HHHHHHHhcccccCCccccchhHHHHHHHHH
Confidence 9999999999999999999999999999987532 1111 0 000 00000000000 0 00000000000000
Q ss_pred HH----------HHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEE
Q 023416 153 KA----------IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 222 (282)
Q Consensus 153 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~l 222 (282)
.. ....+.. .... ........+...... .......+..+...... ...+......+++ ++|++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~-l~~~-~~~~~~l~~~~~~~~-~~~~~~~l~~~i~~~~~--~l~~~l~~l~~~I--~vPtL 422 (481)
T PLN03087 350 RTICLVICKNHRLWEFLTR-LLTR-NRMRTFLIEGFFCHT-HNAAWHTLHNIICGSGS--KLDGYLDHVRDQL--KCDVA 422 (481)
T ss_pred hhhhcccccchHHHHHHHH-Hhhh-hhhhHHHHHHHHhcc-chhhHHHHHHHHhchhh--hhhhHHHHHHHhC--CCCEE
Confidence 00 0000000 0000 000000000000000 00000001111110000 0011123344467 99999
Q ss_pred EEecCCCCCCCHHHHHHHHhccCCceEEEeCCc-ccCCC-CChHHHHHHHHHHHHhh
Q 023416 223 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFLQQT 277 (282)
Q Consensus 223 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~-e~p~~~~~~i~~fl~~~ 277 (282)
+|+|++|.++|.+..+.+++.+|++++++++++ |+++. |+|++|++.|.+|+...
T Consensus 423 II~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 423 IFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred EEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999 99885 99999999999999764
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=6.6e-29 Score=198.76 Aligned_cols=247 Identities=13% Similarity=0.085 Sum_probs=150.6
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
|+||+.. ++...|+.+++.|++. ||+|+++|+||||.|+.+. ..++++++++|+.++++.+.........+++|
T Consensus 92 ~lHG~~~-~~~~~~~~~~~~l~~~----g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~L 166 (349)
T PLN02385 92 FCHGYGD-TCTFFFEGIARKIASS----GYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFL 166 (349)
T ss_pred EECCCCC-ccchHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEE
Confidence 5788864 2234578999999987 8999999999999998753 34589999999999998765321111457999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHH
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQY 159 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
+||||||.+++.++.++|++++++|+++|........ .. ... ....+..+. ... ... ...
T Consensus 167 vGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~-~~--~~~--~~~~~~~~~----------~~~-p~~----~~~ 226 (349)
T PLN02385 167 FGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDV-VP--PPL--VLQILILLA----------NLL-PKA----KLV 226 (349)
T ss_pred EEeccchHHHHHHHHhCcchhhheeEecccccccccc-cC--chH--HHHHHHHHH----------HHC-CCc----eec
Confidence 9999999999999999999999999999853211000 00 000 000000000 000 000 000
Q ss_pred hhccccCCCCCChHHHHHHHHHHhh-cCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHH
Q 023416 160 KSHVYSNPDNVTPGIVESRYALTKR-KGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEME 238 (282)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~ 238 (282)
....+.. ....+............ ......+......+ . ...+....+.++ ++|+|+|+|++|.+++.+..+
T Consensus 227 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~---~~~~~~~~l~~i--~~P~Lii~G~~D~vv~~~~~~ 299 (349)
T PLN02385 227 PQKDLAE-LAFRDLKKRKMAEYNVIAYKDKPRLRTAVELL-R---TTQEIEMQLEEV--SLPLLILHGEADKVTDPSVSK 299 (349)
T ss_pred CCCcccc-ccccCHHHHHHhhcCcceeCCCcchHHHHHHH-H---HHHHHHHhcccC--CCCEEEEEeCCCCccChHHHH
Confidence 0000000 00000000000000000 00000000111000 0 111245566778 999999999999999999998
Q ss_pred HHHhcc--CCceEEEeCCc-ccCCCCChHH----HHHHHHHHHHhhcC
Q 023416 239 ALKGAK--GVTKFVEVPGA-LLPQEEYPAM----VAQELYQFLQQTFE 279 (282)
Q Consensus 239 ~~~~~~--~~~~~~~~~~~-H~~~~e~p~~----~~~~i~~fl~~~~~ 279 (282)
.+.+.. ++.++++++++ |+++.|+|++ +.+.|.+||++..+
T Consensus 300 ~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 300 FLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 887765 56899999999 9999999987 88899999998754
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=1.3e-28 Score=188.78 Aligned_cols=233 Identities=15% Similarity=0.229 Sum_probs=153.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
|+||+. ++...|..+++.|.+ ||+|+++|+||||.|+.+...++++++++++.++++.++ ..+++++
T Consensus 18 ~~hg~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~------~~~v~li 84 (251)
T TIGR02427 18 FINSLG--TDLRMWDPVLPALTP-----DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLG------IERAVFC 84 (251)
T ss_pred EEcCcc--cchhhHHHHHHHhhc-----ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------CCceEEE
Confidence 356764 456789999999976 499999999999999877677899999999999999987 6789999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
|||+||.+++.++.++|.++++++++++......+. . .......... . ..... ....+..++.
T Consensus 85 G~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~-----~----~~~~~~~~~~-~----~~~~~---~~~~~~~~~~ 147 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE-----S----WNARIAAVRA-E----GLAAL---ADAVLERWFT 147 (251)
T ss_pred EeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh-----h----HHHHHhhhhh-c----cHHHH---HHHHHHHHcc
Confidence 999999999999999999999999998742111000 0 0000000000 0 00000 0111111111
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 240 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~ 240 (282)
.. +. .......+.+........ ...+......... ......++++ ++|+++++|++|..++.+..+.+
T Consensus 148 ~~-~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~--~~Pvlii~g~~D~~~~~~~~~~~ 215 (251)
T TIGR02427 148 PG-FR---EAHPARLDLYRNMLVRQP-PDGYAGCCAAIRD-----ADFRDRLGAI--AVPTLCIAGDQDGSTPPELVREI 215 (251)
T ss_pred cc-cc---cCChHHHHHHHHHHHhcC-HHHHHHHHHHHhc-----ccHHHHhhhc--CCCeEEEEeccCCcCChHHHHHH
Confidence 11 10 111111112221111111 0111111111111 1145566777 99999999999999999998989
Q ss_pred HhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 241 KGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 241 ~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
.+..++.++++++++ |+++.|+|+++.+.|.+|++
T Consensus 216 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 216 ADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred HHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 888889999999988 99999999999999999974
No 20
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=5.6e-28 Score=187.86 Aligned_cols=235 Identities=18% Similarity=0.185 Sum_probs=145.3
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCC-CCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
|+||+. +++..|..+++.|++. ||+|+++|+||||.|+.... ..++.++++|+.+.++.+..... ..++++
T Consensus 30 llHG~~--~~~~~~~~~~~~l~~~----g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~l 101 (276)
T PHA02857 30 ISHGAG--EHSGRYEELAENISSL----GILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYP--GVPVFL 101 (276)
T ss_pred EeCCCc--cccchHHHHHHHHHhC----CCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCC--CCCEEE
Confidence 358985 5678999999999987 89999999999999976432 23556666777766654421111 467999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHH
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQY 159 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
+||||||.+|+.++.++|++++++|+++|.... .... ....+.... .. ...
T Consensus 102 vG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~------~~~~----~~~~~~~~~---------~~----------~~~ 152 (276)
T PHA02857 102 LGHSMGATISILAAYKNPNLFTAMILMSPLVNA------EAVP----RLNLLAAKL---------MG----------IFY 152 (276)
T ss_pred EEcCchHHHHHHHHHhCccccceEEEecccccc------cccc----HHHHHHHHH---------HH----------HhC
Confidence 999999999999999999999999999985320 0000 000000000 00 000
Q ss_pred hhcccc--CCCCCChHHHHHHHHHHhhcCC--CcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHH
Q 023416 160 KSHVYS--NPDNVTPGIVESRYALTKRKGA--RYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA 235 (282)
Q Consensus 160 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~ 235 (282)
...... .+.....+..+ .......+.. ......+...... ........+.++ ++|+++++|++|.++|.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i--~~Pvliv~G~~D~i~~~~ 226 (276)
T PHA02857 153 PNKIVGKLCPESVSRDMDE-VYKYQYDPLVNHEKIKAGFASQVLK---ATNKVRKIIPKI--KTPILILQGTNNEISDVS 226 (276)
T ss_pred CCCccCCCCHhhccCCHHH-HHHHhcCCCccCCCccHHHHHHHHH---HHHHHHHhcccC--CCCEEEEecCCCCcCChH
Confidence 000000 00000000000 0000001100 0000111000000 011245567777 999999999999999999
Q ss_pred HHHHHHhcc-CCceEEEeCCc-ccCCCCCh---HHHHHHHHHHHHhhc
Q 023416 236 EMEALKGAK-GVTKFVEVPGA-LLPQEEYP---AMVAQELYQFLQQTF 278 (282)
Q Consensus 236 ~~~~~~~~~-~~~~~~~~~~~-H~~~~e~p---~~~~~~i~~fl~~~~ 278 (282)
.++.+.+.. ++.++++++++ |.++.|++ +++.+.|.+||+.+.
T Consensus 227 ~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 227 GAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 999887754 56889999999 99999976 579999999999863
No 21
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=1.5e-28 Score=187.64 Aligned_cols=233 Identities=14% Similarity=0.149 Sum_probs=142.4
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
|+||+. +++..|+++++.| +. |+|+++|+||||.|+.+. ..+++++++++.+++++++ ..+++++
T Consensus 7 llHG~~--~~~~~w~~~~~~l-~~-----~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~~~------~~~~~lv 71 (242)
T PRK11126 7 FLHGLL--GSGQDWQPVGEAL-PD-----YPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQTLQSYN------ILPYWLV 71 (242)
T ss_pred EECCCC--CChHHHHHHHHHc-CC-----CCEEEecCCCCCCCCCcc-ccCHHHHHHHHHHHHHHcC------CCCeEEE
Confidence 578986 4568999999988 34 999999999999998764 3589999999999999987 6899999
Q ss_pred cccHHHHHHHHHHHhCCCc-ccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHH
Q 023416 81 GGGHAATLTVRAAKKNLVK-PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQY 159 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
||||||.+|+.++.+++.. |++++++++... +.. ........ .........+... .....+..++
T Consensus 72 G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~--~~~------~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~ 137 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG--LQN------AEERQARW----QNDRQWAQRFRQE--PLEQVLADWY 137 (242)
T ss_pred EECHHHHHHHHHHHhCCcccccEEEEeCCCCC--CCC------HHHHHHHH----hhhHHHHHHhccC--cHHHHHHHHH
Confidence 9999999999999998664 999999876421 110 00000000 0000000000000 0011111111
Q ss_pred hhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHH
Q 023416 160 KSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEA 239 (282)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~ 239 (282)
....+. ....+....+...... .........+..... ....+..+.++++ ++|+++++|++|+.+. .
T Consensus 138 ~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~l~~i--~~P~lii~G~~D~~~~-~---- 204 (242)
T PRK11126 138 QQPVFA---SLNAEQRQQLVAKRSN-NNGAAVAAMLEATSL--AKQPDLRPALQAL--TFPFYYLCGERDSKFQ-A---- 204 (242)
T ss_pred hcchhh---ccCccHHHHHHHhccc-CCHHHHHHHHHhcCc--ccCCcHHHHhhcc--CCCeEEEEeCCcchHH-H----
Confidence 111111 1122111111111110 011111111111100 0111255677888 9999999999998542 2
Q ss_pred HHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 240 LKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 240 ~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
+.+. .++++++++++ |+++.|+|+++++.|.+|+.+
T Consensus 205 ~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 205 LAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred HHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 2222 36889999998 999999999999999999975
No 22
>PRK06489 hypothetical protein; Provisional
Probab=99.96 E-value=2.1e-28 Score=196.50 Aligned_cols=247 Identities=15% Similarity=0.089 Sum_probs=144.6
Q ss_pred CCCcccCcccccchH--HHHHHH--------HHhhcCCCeEEEEecCCCCCCCCCCCC-------CCchHHHHHHHHHHh
Q 023416 1 MIPTISDVSTVEEWR--LVAQDI--------VQRVGKVNWRATIVDWPGLGYSDRPKM-------DYNADVMEKFVVDLI 63 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~--~~~~~L--------~~~~~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~l~~~i 63 (282)
||||+.. +...|. .+.+.| ++ +|+||++|+||||.|+.+.. .|+++++++++.+++
T Consensus 74 llHG~~~--~~~~~~~~~~~~~l~~~~~~l~~~-----~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l 146 (360)
T PRK06489 74 VLHGTGG--SGKSFLSPTFAGELFGPGQPLDAS-----KYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLV 146 (360)
T ss_pred EeCCCCC--chhhhccchhHHHhcCCCCccccc-----CCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHH
Confidence 5778864 344554 444444 44 49999999999999987542 589999999988855
Q ss_pred -hCCCCCCcCCCCceE-EEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchh
Q 023416 64 -NAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 141 (282)
Q Consensus 64 -~~l~~~~~~~~~~~~-l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (282)
++++ ..+++ ++||||||.+|+.++.++|++|+++|++++.... ... .... ............+...
T Consensus 147 ~~~lg------i~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~-~~~----~~~~-~~~~~~~~~~~~~~~~ 214 (360)
T PRK06489 147 TEGLG------VKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTE-MSG----RNWM-WRRMLIESIRNDPAWN 214 (360)
T ss_pred HHhcC------CCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCccc-ccH----HHHH-HHHHHHHHHHhCCCCC
Confidence 7787 45664 8999999999999999999999999999874211 000 0000 0000000000000000
Q ss_pred hhHHhhhhhcHHHHHHHH------hhc---cccCCCCCChHHHHHHHHHHhhcCC---CcchHHHhhccCCCCCCHHHHH
Q 023416 142 WMMYNMLVSNEKAIQSQY------KSH---VYSNPDNVTPGIVESRYALTKRKGA---RYVPAAFLTGLLDPVNSREEFL 209 (282)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 209 (282)
...+. .......... ... .+.. .................... ...+...+...... +..
T Consensus 215 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~ 285 (360)
T PRK06489 215 NGNYT---TQPPSLKRANPMFAIATSGGTLAYQA-QAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDY-----NPS 285 (360)
T ss_pred CCCCC---CCHHHHHHHHHHHHHHHhCCHHHHHH-hcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhcc-----ChH
Confidence 00000 0000000000 000 0000 00111111111111111000 01111111111111 146
Q ss_pred HHhhcccCCccEEEEecCCCCCCCHHHH--HHHHhccCCceEEEeCC-----cccCCCCChHHHHHHHHHHHHhhc
Q 023416 210 QLFADLEGKLPLLVVSTEGSPRRSKAEM--EALKGAKGVTKFVEVPG-----ALLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 210 ~~l~~i~~~~P~lii~G~~D~~~~~~~~--~~~~~~~~~~~~~~~~~-----~H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
+.+++| ++|+|+|+|++|..+|.+.. +.+.+.+|+.+++++++ ||+++ |+|++|++.|.+||++..
T Consensus 286 ~~L~~I--~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 286 PDLEKI--KAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHHhC--CCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 778888 99999999999999998865 78889999999999998 49997 899999999999998764
No 23
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=5.4e-28 Score=184.67 Aligned_cols=234 Identities=12% Similarity=0.077 Sum_probs=145.7
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
++||+. +++..|+.+++.|++. |+|+++|+||||.|+.. ..++++++++++.+++ ..+++++
T Consensus 9 ~~HG~~--~~~~~~~~~~~~l~~~-----~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----------~~~~~lv 70 (245)
T TIGR01738 9 LIHGWG--MNAEVFRCLDEELSAH-----FTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----------PDPAIWL 70 (245)
T ss_pred EEcCCC--CchhhHHHHHHhhccC-----eEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----------CCCeEEE
Confidence 478875 5678899999999875 99999999999999764 3567888877776543 4579999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
||||||.+++.++.++|++++++|++++........ ...... .......+.. .... ........+..
T Consensus 71 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~--~~~~~~--~~~~~~~~~~------~~~~---~~~~~~~~~~~ 137 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDRVRALVTVASSPCFSARE--DWPEGI--KPDVLTGFQQ------QLSD---DYQRTIERFLA 137 (245)
T ss_pred EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCC--cccccC--CHHHHHHHHH------Hhhh---hHHHHHHHHHH
Confidence 999999999999999999999999998742110000 000000 0000000000 0000 00001111111
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCC--cchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGAR--YVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEME 238 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~ 238 (282)
...+.. .................... ..+...+..... .+....++++ ++|+++++|++|..++.+..+
T Consensus 138 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i--~~Pvlii~g~~D~~~~~~~~~ 208 (245)
T TIGR01738 138 LQTLGT--PTARQDARALKQTLLARPTPNVQVLQAGLEILAT-----VDLRQPLQNI--SVPFLRLYGYLDGLVPAKVVP 208 (245)
T ss_pred HHHhcC--CccchHHHHHHHHhhccCCCCHHHHHHHHHHhhc-----ccHHHHHhcC--CCCEEEEeecCCcccCHHHHH
Confidence 111111 11111111111111111000 111111111111 1145567788 999999999999999999999
Q ss_pred HHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHH
Q 023416 239 ALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 274 (282)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl 274 (282)
.+.+..+++++++++++ |+++.|+|++|++.|.+|+
T Consensus 209 ~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 209 YLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 89988999999999998 9999999999999999985
No 24
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.96 E-value=2e-28 Score=188.48 Aligned_cols=236 Identities=12% Similarity=0.130 Sum_probs=150.7
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC-CCCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
|+||+. +++..|..+++.|.+. |+|+++|+||||.|+.+ ...++++++++++.+++++++ ..++++
T Consensus 18 ~lhG~~--~~~~~~~~~~~~l~~~-----~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~l 84 (257)
T TIGR03611 18 LSSGLG--GSGSYWAPQLDVLTQR-----FHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALN------IERFHF 84 (257)
T ss_pred EEcCCC--cchhHHHHHHHHHHhc-----cEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC------CCcEEE
Confidence 478886 4567899999999875 99999999999999864 367899999999999999987 578999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHH
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQY 159 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
+||||||.+++.++.++|++++++|++++.... .+.. . .............. ....... .
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-~~~~-----~--~~~~~~~~~~~~~~-----------~~~~~~~-~ 144 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPERLLSLVLINAWSRP-DPHT-----R--RCFDVRIALLQHAG-----------PEAYVHA-Q 144 (257)
T ss_pred EEechhHHHHHHHHHHChHHhHHheeecCCCCC-ChhH-----H--HHHHHHHHHHhccC-----------cchhhhh-h
Confidence 999999999999999999999999999864211 0000 0 00000000000000 0000000 0
Q ss_pred hhccccCC--CCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHH
Q 023416 160 KSHVYSNP--DNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM 237 (282)
Q Consensus 160 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~ 237 (282)
....+... ................................... ....++++ ++|+++++|++|..++.+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i--~~P~l~i~g~~D~~~~~~~~ 217 (257)
T TIGR03611 145 ALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFD-----VSARLDRI--QHPVLLIANRDDMLVPYTQS 217 (257)
T ss_pred hhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCC-----cHHHhccc--CccEEEEecCcCcccCHHHH
Confidence 00000000 00000000000000000000000000000111111 33556777 99999999999999999999
Q ss_pred HHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 238 EALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
+.+.+..++.+++.++++ |+++.++|+++++.|.+||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 218 LRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred HHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999988899999999998 999999999999999999863
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=1.4e-28 Score=185.72 Aligned_cols=223 Identities=19% Similarity=0.280 Sum_probs=148.2
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--CCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
|+||+. ++...|..+++.|+ + ||+|+++|+||||.|+.+. ..++++++++++.++++++. ..+++
T Consensus 3 ~~hG~~--~~~~~~~~~~~~l~-~----~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~ 69 (228)
T PF12697_consen 3 FLHGFG--GSSESWDPLAEALA-R----GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG------IKKVI 69 (228)
T ss_dssp EE-STT--TTGGGGHHHHHHHH-T----TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT------TSSEE
T ss_pred EECCCC--CCHHHHHHHHHHHh-C----CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc------ccccc
Confidence 578886 45589999999996 4 6999999999999998854 46899999999999999998 67899
Q ss_pred EEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHH
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 158 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (282)
++|||+||.+++.++.++|++|+++|+++|..... .... .......+..+. ... .......
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~--~~~~----~~~~~~~~~~~~---------~~~----~~~~~~~ 130 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLP--DSPS----RSFGPSFIRRLL---------AWR----SRSLRRL 130 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHH--HHHC----HHHHHHHHHHHH---------HHH----HHHHHHH
T ss_pred ccccccccccccccccccccccccceeeccccccc--cccc----ccccchhhhhhh---------hcc----ccccccc
Confidence 99999999999999999999999999999853100 0000 000000111111 000 0000000
Q ss_pred HhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHH
Q 023416 159 YKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEME 238 (282)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~ 238 (282)
....... ....+........ ....+..++... ....+....++++ ++|+++++|++|..++.+..+
T Consensus 131 ~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~~~~--~~pvl~i~g~~D~~~~~~~~~ 196 (228)
T PF12697_consen 131 ASRFFYR---WFDGDEPEDLIRS-----SRRALAEYLRSN----LWQADLSEALPRI--KVPVLVIHGEDDPIVPPESAE 196 (228)
T ss_dssp HHHHHHH---HHTHHHHHHHHHH-----HHHHHHHHHHHH----HHHHHHHHHHHGS--SSEEEEEEETTSSSSHHHHHH
T ss_pred ccccccc---ccccccccccccc-----cccccccccccc----ccccccccccccc--CCCeEEeecCCCCCCCHHHHH
Confidence 0000000 0011111111111 000111111100 0122356778888 999999999999999999999
Q ss_pred HHHhccCCceEEEeCCc-ccCCCCChHHHHHH
Q 023416 239 ALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQE 269 (282)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~ 269 (282)
.+.+..+++++++++++ |+++.|+|++|++.
T Consensus 197 ~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 197 ELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 99988899999999998 99999999999874
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.9e-27 Score=188.25 Aligned_cols=241 Identities=12% Similarity=0.065 Sum_probs=149.2
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
|+||+.... ...|..++..|++. ||+|+++|+||||.|+.+. ...+++.+++|+.++++.+.......+.+++|
T Consensus 64 llHG~~~~~-~~~~~~~~~~L~~~----Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l 138 (330)
T PLN02298 64 MVHGYGNDI-SWTFQSTAIFLAQM----GFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFL 138 (330)
T ss_pred EEcCCCCCc-ceehhHHHHHHHhC----CCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEE
Confidence 578886433 45677888889987 8999999999999998643 34688999999999999876432112457999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHH
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQY 159 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
+||||||.+++.++.++|++|+++|+++|...... .. ............ ...+.
T Consensus 139 ~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~-~~~~~~~~~~~~------------------------~~~~~ 192 (330)
T PLN02298 139 YGESMGGAICLLIHLANPEGFDGAVLVAPMCKISD-KI-RPPWPIPQILTF------------------------VARFL 192 (330)
T ss_pred EEecchhHHHHHHHhcCcccceeEEEecccccCCc-cc-CCchHHHHHHHH------------------------HHHHC
Confidence 99999999999999999999999999988532110 00 000000000000 00000
Q ss_pred hhccccC-CCC----CChHHHHHHHHHHhhcC-C--CcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCC
Q 023416 160 KSHVYSN-PDN----VTPGIVESRYALTKRKG-A--RYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 231 (282)
Q Consensus 160 ~~~~~~~-~~~----~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~ 231 (282)
....... ... ........... ..+. . ........ .... ..+.....+.++ ++|+|+|+|++|.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~l~~i--~~PvLii~G~~D~i 264 (330)
T PLN02298 193 PTLAIVPTADLLEKSVKVPAKKIIAK--RNPMRYNGKPRLGTVV-ELLR---VTDYLGKKLKDV--SIPFIVLHGSADVV 264 (330)
T ss_pred CCCccccCCCcccccccCHHHHHHHH--hCccccCCCccHHHHH-HHHH---HHHHHHHhhhhc--CCCEEEEecCCCCC
Confidence 0000000 000 00000000000 0000 0 00000000 0000 111234566778 99999999999999
Q ss_pred CCHHHHHHHHhcc--CCceEEEeCCc-ccCCCCChH----HHHHHHHHHHHhhcCC
Q 023416 232 RSKAEMEALKGAK--GVTKFVEVPGA-LLPQEEYPA----MVAQELYQFLQQTFEP 280 (282)
Q Consensus 232 ~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e~p~----~~~~~i~~fl~~~~~~ 280 (282)
++.+..+.+.+.. ++.++++++++ |.++.++|+ ++.+.|.+||.+....
T Consensus 265 vp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 265 TDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred CCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 9999999887654 47899999999 999998885 4777889999886543
No 27
>PRK10749 lysophospholipase L2; Provisional
Probab=99.96 E-value=2.4e-28 Score=193.82 Aligned_cols=251 Identities=14% Similarity=0.069 Sum_probs=148.5
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC------CCCchHHHHHHHHHHhhCCCCCCcCCC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK------MDYNADVMEKFVVDLINAPDSPVSSSE 74 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~l~~~i~~l~~~~~~~~ 74 (282)
|+||+. .+...|..++..|.+. ||+|+++|+||||.|+++. ..++++++++|+.++++.+..... .
T Consensus 59 l~HG~~--~~~~~y~~~~~~l~~~----g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~ 130 (330)
T PRK10749 59 ICPGRI--ESYVKYAELAYDLFHL----GYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP--Y 130 (330)
T ss_pred EECCcc--chHHHHHHHHHHHHHC----CCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC--C
Confidence 578885 4566899999999887 8999999999999998642 125899999999999987631111 5
Q ss_pred CceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHH
Q 023416 75 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 154 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
.+++++||||||.+++.++.++|++++++|+++|......+. ... ............+..... +...
T Consensus 131 ~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~-~~~~------ 197 (330)
T PRK10749 131 RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-----PSW-MARRILNWAEGHPRIRDG-YAIG------ 197 (330)
T ss_pred CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-----CcH-HHHHHHHHHHHhcCCCCc-CCCC------
Confidence 789999999999999999999999999999998853211100 000 000000000000000000 0000
Q ss_pred HHHHHhhccccCCCCCChHHHHHHHHHHhhcCCC---cchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCC
Q 023416 155 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGAR---YVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 231 (282)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~ 231 (282)
...+.......+.-...++............... ............ ....+...++++ ++|+|+|+|++|.+
T Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i--~~P~Lii~G~~D~v 272 (330)
T PRK10749 198 TGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESIL---AGEQVLAGAGDI--TTPLLLLQAEEERV 272 (330)
T ss_pred CCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHH---HHHHHHhhccCC--CCCEEEEEeCCCee
Confidence 0000000000000001122211112211111100 001111110000 011234556677 99999999999999
Q ss_pred CCHHHHHHHHhcc-------CCceEEEeCCc-ccCCCCCh---HHHHHHHHHHHHhh
Q 023416 232 RSKAEMEALKGAK-------GVTKFVEVPGA-LLPQEEYP---AMVAQELYQFLQQT 277 (282)
Q Consensus 232 ~~~~~~~~~~~~~-------~~~~~~~~~~~-H~~~~e~p---~~~~~~i~~fl~~~ 277 (282)
++.+..+.+.+.. +++++++++++ |.++.|.+ +++.+.|.+||++.
T Consensus 273 v~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 273 VDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred eCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9998888776543 45689999999 99999886 67889999999874
No 28
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=8.6e-28 Score=191.78 Aligned_cols=239 Identities=13% Similarity=0.056 Sum_probs=141.6
Q ss_pred chHHHHH---HHH-HhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHH
Q 023416 13 EWRLVAQ---DIV-QRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATL 88 (282)
Q Consensus 13 ~w~~~~~---~L~-~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~ 88 (282)
.|..+++ .|. ++ |+||++|+||||.|.. ..++++++++|+.+++++++. ...++++||||||.+
T Consensus 84 ~w~~~v~~~~~L~~~~-----~~Vi~~Dl~G~g~s~~--~~~~~~~~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~v 151 (343)
T PRK08775 84 WWEGLVGSGRALDPAR-----FRLLAFDFIGADGSLD--VPIDTADQADAIALLLDALGI-----ARLHAFVGYSYGALV 151 (343)
T ss_pred cchhccCCCCccCccc-----cEEEEEeCCCCCCCCC--CCCCHHHHHHHHHHHHHHcCC-----CcceEEEEECHHHHH
Confidence 6888886 574 55 9999999999998843 467889999999999999983 234579999999999
Q ss_pred HHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhh--c-C---cchhhhHHhh---h-hhcHHHHHHH
Q 023416 89 TVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL--R-A---PGVGWMMYNM---L-VSNEKAIQSQ 158 (282)
Q Consensus 89 a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~---~~~~~~~~~~---~-~~~~~~~~~~ 158 (282)
|+.++.++|++|+++|++++..... +. ............ . . ...+...... . ......+...
T Consensus 152 A~~~A~~~P~~V~~LvLi~s~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (343)
T PRK08775 152 GLQFASRHPARVRTLVVVSGAHRAH-PY-------AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEER 223 (343)
T ss_pred HHHHHHHChHhhheEEEECccccCC-HH-------HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999999999999998753210 00 000000000000 0 0 0000000000 0 0011111111
Q ss_pred HhhccccCCCCCChHHHHHHHH---HHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHH
Q 023416 159 YKSHVYSNPDNVTPGIVESRYA---LTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA 235 (282)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~ 235 (282)
+..................... ..........+..+...... ....++++ ++|+|+|+|++|..++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~I--~~PtLvi~G~~D~~~p~~ 294 (343)
T PRK08775 224 FDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL-------HRVDPEAI--RVPTVVVAVEGDRLVPLA 294 (343)
T ss_pred hCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh-------cCCChhcC--CCCeEEEEeCCCEeeCHH
Confidence 1100000000011111111110 01111111111111110000 01124567 999999999999999988
Q ss_pred HHHHHHhcc-CCceEEEeCC-c-ccCCCCChHHHHHHHHHHHHhhcCC
Q 023416 236 EMEALKGAK-GVTKFVEVPG-A-LLPQEEYPAMVAQELYQFLQQTFEP 280 (282)
Q Consensus 236 ~~~~~~~~~-~~~~~~~~~~-~-H~~~~e~p~~~~~~i~~fl~~~~~~ 280 (282)
..+.+.+.+ ++++++++++ + |++++|+|++|++.|.+||.++.+.
T Consensus 295 ~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~~~ 342 (343)
T PRK08775 295 DLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTGET 342 (343)
T ss_pred HHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcccc
Confidence 888888766 7899999984 6 9999999999999999999987653
No 29
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=3e-27 Score=188.80 Aligned_cols=248 Identities=12% Similarity=0.012 Sum_probs=142.3
Q ss_pred cchHHHH---HHHHHhhcCCCeEEEEecCCCCCCCCCCC---CCCchHH-----HHHHHHH----HhhCCCCCCcCCCCc
Q 023416 12 EEWRLVA---QDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADV-----MEKFVVD----LINAPDSPVSSSESD 76 (282)
Q Consensus 12 ~~w~~~~---~~L~~~~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~-----~~~~l~~----~i~~l~~~~~~~~~~ 76 (282)
..|..++ +.|... +|+||++|+||||.|+.+. ..|+++. +++++.+ ++++++ ..+
T Consensus 55 ~~~~~~~~~~~~l~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lg------i~~ 124 (339)
T PRK07581 55 QDNEWLIGPGRALDPE----KYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFG------IER 124 (339)
T ss_pred ccchhhccCCCccCcC----ceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhC------CCc
Confidence 3455443 466543 5999999999999998653 2455544 4666655 667887 567
Q ss_pred -eEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchh---------hhHHh
Q 023416 77 -LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG---------WMMYN 146 (282)
Q Consensus 77 -~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 146 (282)
++|+||||||.+|+.++.++|++|+++|++++... ..+.. ..........+...+... ..+..
T Consensus 125 ~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~-~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (339)
T PRK07581 125 LALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK-TTPHN------FVFLEGLKAALTADPAFNGGWYAEPPERGLRA 197 (339)
T ss_pred eEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC-CCHHH------HHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHH
Confidence 57999999999999999999999999999986421 10000 000000000000000000 00000
Q ss_pred hh--hhcHHHHHHHHhhccccCCC-CCChHHHHHHHHHHhhcCCCcchHHHhhccC----CCCCC-HHHHHHHhhcccCC
Q 023416 147 ML--VSNEKAIQSQYKSHVYSNPD-NVTPGIVESRYALTKRKGARYVPAAFLTGLL----DPVNS-REEFLQLFADLEGK 218 (282)
Q Consensus 147 ~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~l~~i~~~ 218 (282)
.. .........++....+.... ...++.....................+.... ..... ..+....++++ +
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I--~ 275 (339)
T PRK07581 198 HARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI--T 275 (339)
T ss_pred HHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC--C
Confidence 00 00000001111111110000 0001222222221111111111222211110 00000 11356778888 9
Q ss_pred ccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCC-c-ccCCCCChHHHHHHHHHHHHhhc
Q 023416 219 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPG-A-LLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 219 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~-H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
+|+|+|+|++|..++.+..+.+.+.+++++++++++ + |+++.|+|++++..|.+||.+..
T Consensus 276 ~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 276 AKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 7 99999999999999999998864
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.95 E-value=6.5e-27 Score=179.13 Aligned_cols=242 Identities=13% Similarity=0.137 Sum_probs=150.5
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--CCCchHHHHHH-HHHHhhCCCCCCcCCCCce
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKF-VVDLINAPDSPVSSSESDL 77 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~-l~~~i~~l~~~~~~~~~~~ 77 (282)
++||+. ++...|.++++.|+ . ||+|+++|+||||.|+.+. ..+++++++++ +..+++.++ ..++
T Consensus 6 ~~hG~~--~~~~~~~~~~~~L~-~----~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 72 (251)
T TIGR03695 6 FLHGFL--GSGADWQALIELLG-P----HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLG------IEPF 72 (251)
T ss_pred EEcCCC--CchhhHHHHHHHhc-c----cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcC------CCeE
Confidence 478875 56778999999998 4 6999999999999998754 46788899988 778888876 6789
Q ss_pred EEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHH
Q 023416 78 VIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQS 157 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
+++|||+||.+++.++.++|..|++++++++......+. . . ... ..........+... ........
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~--~----~--~~~----~~~~~~~~~~~~~~--~~~~~~~~ 138 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEE--E----R--AAR----RQNDEQLAQRFEQE--GLEAFLDD 138 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchH--h----h--hhh----hhcchhhhhHHHhc--CccHHHHH
Confidence 999999999999999999999999999998742111000 0 0 000 00000000000000 00111111
Q ss_pred HHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHH
Q 023416 158 QYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM 237 (282)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~ 237 (282)
+.....+......++............... ......+...... ........++++ ++|+++++|++|...+ +..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~--~~P~l~i~g~~D~~~~-~~~ 212 (251)
T TIGR03695 139 WYQQPLFASQKNLPPEQRQALRAKRLANNP-EGLAKMLRATGLG--KQPSLWPKLQAL--TIPVLYLCGEKDEKFV-QIA 212 (251)
T ss_pred HhcCceeeecccCChHHhHHHHHhcccccc-hHHHHHHHHhhhh--cccchHHHhhCC--CCceEEEeeCcchHHH-HHH
Confidence 111111111111222222222211111111 1111111111000 011134556777 9999999999998664 566
Q ss_pred HHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 238 EALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
+.+.+..++.++++++++ |+++.|+|+++++.|.+|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 213 KEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 778888899999999997 99999999999999999983
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=1e-26 Score=188.41 Aligned_cols=234 Identities=20% Similarity=0.301 Sum_probs=152.5
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
|+||+. ++...|..+++.|.+. |+|+++|+||||.|......++++++++++.++++.++ ..+++++
T Consensus 136 ~~HG~~--~~~~~~~~~~~~l~~~-----~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~lv 202 (371)
T PRK14875 136 LIHGFG--GDLNNWLFNHAALAAG-----RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALG------IERAHLV 202 (371)
T ss_pred EECCCC--CccchHHHHHHHHhcC-----CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC------CccEEEE
Confidence 467765 5678899999999876 99999999999999765567899999999999999987 5789999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
|||+||.+++.++.++|.++.++++++|....+ .. ...+...+.... ....+..++.
T Consensus 203 G~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~--~~---------~~~~~~~~~~~~------------~~~~~~~~~~ 259 (371)
T PRK14875 203 GHSMGGAVALRLAARAPQRVASLTLIAPAGLGP--EI---------NGDYIDGFVAAE------------SRRELKPVLE 259 (371)
T ss_pred eechHHHHHHHHHHhCchheeEEEEECcCCcCc--cc---------chhHHHHhhccc------------chhHHHHHHH
Confidence 999999999999999999999999998753211 00 000000000000 0011111111
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 240 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~ 240 (282)
. .+.+........................+..+............+....++++ ++|+++++|++|..++.+..+.+
T Consensus 260 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~g~~D~~vp~~~~~~l 336 (371)
T PRK14875 260 L-LFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASL--AIPVLVIWGEQDRIIPAAHAQGL 336 (371)
T ss_pred H-HhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcC--CCCEEEEEECCCCccCHHHHhhc
Confidence 1 11111122222222222111111111111111111111111223355667788 99999999999999998776554
Q ss_pred HhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 241 KGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 241 ~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
.++.++.+++++ |++++|+|+++++.|.+||++
T Consensus 337 ---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 337 ---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred ---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 346789999998 999999999999999999975
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=3.6e-26 Score=184.99 Aligned_cols=258 Identities=12% Similarity=0.087 Sum_probs=145.0
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCc-h----HHHHHHHHHHhhCCCCCCcCCCC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYN-A----DVMEKFVVDLINAPDSPVSSSES 75 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~-~----~~~~~~l~~~i~~l~~~~~~~~~ 75 (282)
|+||+.. +...|.+.++.|++. |+|+++|+||||.|+.+...++ . +.+++++.++++.++ ..
T Consensus 110 llHG~~~--~~~~~~~~~~~L~~~-----~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~------~~ 176 (402)
T PLN02894 110 MVHGYGA--SQGFFFRNFDALASR-----FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKN------LS 176 (402)
T ss_pred EECCCCc--chhHHHHHHHHHHhC-----CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcC------CC
Confidence 5788853 567788889999886 9999999999999987653322 1 235667788888776 56
Q ss_pred ceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhh-hhhhhhhhh----cCcchhhhHHhhhhh
Q 023416 76 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET-RYGLLRGTL----RAPGVGWMMYNMLVS 150 (282)
Q Consensus 76 ~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~ 150 (282)
+++++||||||.+++.++.++|++|+++|+++|......+... ...... ...+...++ ...............
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp 254 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDK--SEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGP 254 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchh--HHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccc
Confidence 8999999999999999999999999999999885321111100 000000 000000000 000000000000000
Q ss_pred -cHHHHHHHHhhccc--cCCCCCChHHHH----HHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEE
Q 023416 151 -NEKAIQSQYKSHVY--SNPDNVTPGIVE----SRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLV 223 (282)
Q Consensus 151 -~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~li 223 (282)
.+..........+. ......+++..+ ..................+... .. ....+....++++ ++|+++
T Consensus 255 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~I--~vP~li 330 (402)
T PLN02894 255 WGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSF-GA-FARKPLLESASEW--KVPTTF 330 (402)
T ss_pred hhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccC-ch-hhcchHhhhcccC--CCCEEE
Confidence 00111111110000 000111211111 1111111111111111111111 00 0122355667788 999999
Q ss_pred EecCCCCCCCHHHHHHHHh-ccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhc
Q 023416 224 VSTEGSPRRSKAEMEALKG-AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 224 i~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
|+|++|.+.+ ...+.+.+ ..+.+++++++++ |+++.|+|++|++.|.+|++...
T Consensus 331 I~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 331 IYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred EEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 9999998776 44444444 3346889999999 99999999999999999987653
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.95 E-value=7e-27 Score=180.23 Aligned_cols=244 Identities=14% Similarity=0.089 Sum_probs=149.4
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
|+||+.. +...|.++++.|.+. ||+|+++|+||||.|.... ..++++++++++.++++++.. ..+++|
T Consensus 23 liHG~~~--~~~~w~~~~~~L~~~----g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~-----~~~v~l 91 (273)
T PLN02211 23 LIHGISG--GSWCWYKIRCLMENS----GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPE-----NEKVIL 91 (273)
T ss_pred EECCCCC--CcCcHHHHHHHHHhC----CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCC-----CCCEEE
Confidence 5788764 456899999999987 7999999999999986432 458999999999999998852 478999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhh--hhhhhhhhhcC-c-chhhhHHhhhhhcHHHH
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET--RYGLLRGTLRA-P-GVGWMMYNMLVSNEKAI 155 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 155 (282)
+||||||.++..++.++|++|+++|++++.... . +....... ....+...... + ..+...... .......
T Consensus 92 vGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~---~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 165 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK---L--GFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQP-PTSAIIK 165 (273)
T ss_pred EEECchHHHHHHHHHhChhheeEEEEeccccCC---C--CCCHHHHHhccccchhhhccceeeeeccCCCCC-CceeeeC
Confidence 999999999999999999999999999764210 0 00000000 00000000000 0 000000000 0000000
Q ss_pred HHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHH
Q 023416 156 QSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA 235 (282)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~ 235 (282)
..+.....+. ..+++...... ....+.....+. ... ......++. ++|+++|+|++|..+|++
T Consensus 166 ~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~-------~~~-----~~~~~~~~~-~vP~l~I~g~~D~~ip~~ 228 (273)
T PLN02211 166 KEFRRKILYQ---MSPQEDSTLAA-MLLRPGPILALR-------SAR-----FEEETGDID-KVPRVYIKTLHDHVVKPE 228 (273)
T ss_pred HHHHHHHHhc---CCCHHHHHHHH-HhcCCcCccccc-------ccc-----ccccccccC-ccceEEEEeCCCCCCCHH
Confidence 0000111111 11222221111 111111111110 000 111112221 689999999999999999
Q ss_pred HHHHHHhccCCceEEEeCCcccCCCCChHHHHHHHHHHHHhhc
Q 023416 236 EMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
.++.+.+..+..+++.++.||.+++++|+++++.|.++.....
T Consensus 229 ~~~~m~~~~~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~~ 271 (273)
T PLN02211 229 QQEAMIKRWPPSQVYELESDHSPFFSTPFLLFGLLIKAAASVG 271 (273)
T ss_pred HHHHHHHhCCccEEEEECCCCCccccCHHHHHHHHHHHHHHhc
Confidence 9999999888889999985599999999999999999876543
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=5.9e-26 Score=177.58 Aligned_cols=245 Identities=13% Similarity=0.125 Sum_probs=145.7
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-C--CCchHHHHHHHHHHhhCCCCCCcCCCCce
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-M--DYNADVMEKFVVDLINAPDSPVSSSESDL 77 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~--~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 77 (282)
++||+... +...|..+...|.+. ||+|+++|+||||.|+.+. . .++++++++++.+++++++ ..++
T Consensus 30 ~~hG~~g~-~~~~~~~~~~~l~~~----g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 98 (288)
T TIGR01250 30 LLHGGPGM-SHEYLENLRELLKEE----GREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLG------LDKF 98 (288)
T ss_pred EEcCCCCc-cHHHHHHHHHHHHhc----CCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcC------CCcE
Confidence 35676433 345566777777765 7999999999999998754 2 3899999999999999987 5679
Q ss_pred EEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhh----hhcH-
Q 023416 78 VIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNML----VSNE- 152 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~- 152 (282)
+++||||||.+++.++.++|+++++++++++.... +.... ...... ..+. ......+.... ..+.
T Consensus 99 ~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~--~~~~~------~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~ 168 (288)
T TIGR01250 99 YLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA--PEYVK------ELNRLR-KELP-PEVRAAIKRCEASGDYDNPE 168 (288)
T ss_pred EEEEeehHHHHHHHHHHhCccccceeeEecccccc--hHHHH------HHHHHH-hhcC-hhHHHHHHHHHhccCcchHH
Confidence 99999999999999999999999999999874211 10000 000000 0000 00000000000 0000
Q ss_pred --HHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhc--c-CCCCCCHHHHHHHhhcccCCccEEEEecC
Q 023416 153 --KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG--L-LDPVNSREEFLQLFADLEGKLPLLVVSTE 227 (282)
Q Consensus 153 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~l~~i~~~~P~lii~G~ 227 (282)
.....+...... .. ............ ......+..+... . ........+..+.++++ ++|+++++|+
T Consensus 169 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~lii~G~ 240 (288)
T TIGR01250 169 YQEAVEVFYHHLLC-RT-RKWPEALKHLKS----GMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEI--KVPTLLTVGE 240 (288)
T ss_pred HHHHHHHHHHHhhc-cc-ccchHHHHHHhh----ccCHHHHhcccCCccccccccccccCHHHHhhcc--CCCEEEEecC
Confidence 001100000000 00 011111110000 0000000000000 0 00000111245667788 9999999999
Q ss_pred CCCCCCHHHHHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 228 GSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 228 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
+|.. +.+..+.+.+..++.++++++++ |+++.|+|+++++.|.+||+
T Consensus 241 ~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 241 FDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 9985 56778888888899999999998 99999999999999999984
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.95 E-value=1.6e-26 Score=185.02 Aligned_cols=256 Identities=15% Similarity=0.053 Sum_probs=147.5
Q ss_pred CCCcccCccccc---------chHHHHH---HHHHhhcCCCeEEEEecCCC--CCCCCCC----C--------CCCchHH
Q 023416 1 MIPTISDVSTVE---------EWRLVAQ---DIVQRVGKVNWRATIVDWPG--LGYSDRP----K--------MDYNADV 54 (282)
Q Consensus 1 ~~p~~~~~ss~~---------~w~~~~~---~L~~~~~~~g~~vi~~D~~G--~G~S~~~----~--------~~~~~~~ 54 (282)
|++|++..+... .|+.++. .|... +|+||++|+|| ||.|... . ..|++++
T Consensus 36 l~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~----~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~ 111 (351)
T TIGR01392 36 VCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTD----RYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRD 111 (351)
T ss_pred EcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCC----ceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHH
Confidence 467777544322 5888762 44333 59999999999 6665431 1 2589999
Q ss_pred HHHHHHHHhhCCCCCCcCCCCc-eEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhh
Q 023416 55 MEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 133 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~-~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (282)
+++++.+++++++ ..+ ++++||||||.+++.++.++|++|+++|++++..... .. ...........
T Consensus 112 ~~~~~~~~~~~l~------~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~-----~~~~~~~~~~~ 178 (351)
T TIGR01392 112 DVKAQKLLLDHLG------IEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHS--AW-----CIAFNEVQRQA 178 (351)
T ss_pred HHHHHHHHHHHcC------CCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCC--HH-----HHHHHHHHHHH
Confidence 9999999999997 456 9999999999999999999999999999998753211 00 00000000000
Q ss_pred hhcC-------------cchhhhHHhhh----hhcHHHHHHHHhhccccCCCC----CChHHHHHHH----HHHhhcCCC
Q 023416 134 TLRA-------------PGVGWMMYNML----VSNEKAIQSQYKSHVYSNPDN----VTPGIVESRY----ALTKRKGAR 188 (282)
Q Consensus 134 ~~~~-------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~ 188 (282)
.... +..+......+ ......+...+.......... ......+.+. .........
T Consensus 179 ~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 258 (351)
T TIGR01392 179 ILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDA 258 (351)
T ss_pred HHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCc
Confidence 0000 00000000000 001111221111110000000 0000111111 011111000
Q ss_pred cchHHHhhccCCCC--CCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCCceEE-----EeCCc-ccCCC
Q 023416 189 YVPAAFLTGLLDPV--NSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFV-----EVPGA-LLPQE 260 (282)
Q Consensus 189 ~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-----~~~~~-H~~~~ 260 (282)
..+........... ....+..+.++++ ++|+|+|+|++|.++|++..+.+.+.+++.+++ +++++ |++++
T Consensus 259 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~I--~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l 336 (351)
T TIGR01392 259 NSYLYLTRALDTHDLGRGRGSLTEALSRI--KAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL 336 (351)
T ss_pred chHHHHHHHHHhcCCcCCCCCHHHHHhhC--CCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh
Confidence 11111111111100 0112357788888 999999999999999999999999998888765 56777 99999
Q ss_pred CChHHHHHHHHHHHH
Q 023416 261 EYPAMVAQELYQFLQ 275 (282)
Q Consensus 261 e~p~~~~~~i~~fl~ 275 (282)
|+|++|++.|.+||.
T Consensus 337 e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 337 VETDQVEELIRGFLR 351 (351)
T ss_pred cCHHHHHHHHHHHhC
Confidence 999999999999984
No 36
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=4e-26 Score=184.07 Aligned_cols=262 Identities=12% Similarity=0.007 Sum_probs=149.3
Q ss_pred CCCcccCccccc-----------chHHHH----HHHHHhhcCCCeEEEEecCCCC-CCCCCCC--------------CCC
Q 023416 1 MIPTISDVSTVE-----------EWRLVA----QDIVQRVGKVNWRATIVDWPGL-GYSDRPK--------------MDY 50 (282)
Q Consensus 1 ~~p~~~~~ss~~-----------~w~~~~----~~L~~~~~~~g~~vi~~D~~G~-G~S~~~~--------------~~~ 50 (282)
|+||++..+... .|..++ +.+++. |+||++|++|+ |.|+.+. ..|
T Consensus 53 l~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~-----~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 53 ICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDR-----YFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred EeCCcCCchhhcccccccCCCCcchhhccCCCCccCccc-----eEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 467777544321 477876 333554 99999999993 5453321 168
Q ss_pred chHHHHHHHHHHhhCCCCCCcCCCCc-eEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhh
Q 023416 51 NADVMEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYG 129 (282)
Q Consensus 51 ~~~~~~~~l~~~i~~l~~~~~~~~~~-~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 129 (282)
+++++++++.+++++++ ..+ ++++||||||.+++.++.++|++|+++|++++..... .. . .........
T Consensus 128 ~~~~~~~~~~~~l~~l~------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~-~-~~~~~~~~~ 197 (379)
T PRK00175 128 TIRDWVRAQARLLDALG------ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLS--AQ-N-IAFNEVARQ 197 (379)
T ss_pred CHHHHHHHHHHHHHHhC------CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccC--HH-H-HHHHHHHHH
Confidence 99999999999999998 456 5899999999999999999999999999998743110 00 0 000000000
Q ss_pred hhhhhh-----------cCcchhhhHHhhh----hhcHHHHHHHHhhccccCCC---CCChHHHHHHHH----HHhhcCC
Q 023416 130 LLRGTL-----------RAPGVGWMMYNML----VSNEKAIQSQYKSHVYSNPD---NVTPGIVESRYA----LTKRKGA 187 (282)
Q Consensus 130 ~~~~~~-----------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~ 187 (282)
.+.... ..+..+....... ......+...+......... .......+.+.. .......
T Consensus 198 ~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d 277 (379)
T PRK00175 198 AILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFD 277 (379)
T ss_pred HHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccC
Confidence 000000 0000000000000 00111111111111110000 000011111110 0011111
Q ss_pred CcchHH---HhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCCc----eEEEeC-Cc-ccC
Q 023416 188 RYVPAA---FLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVT----KFVEVP-GA-LLP 258 (282)
Q Consensus 188 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~~~~~~-~~-H~~ 258 (282)
...+.. .+...........++.+.+++| ++|+|+|+|++|.+++++..+.+.+.+++. ++++++ ++ |++
T Consensus 278 ~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I--~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~ 355 (379)
T PRK00175 278 ANSYLYLTRALDYFDPARGRGGDLAAALARI--KARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDA 355 (379)
T ss_pred chHHHHHHHHHHhccccCCCCCCHHHHHhcC--CCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchh
Confidence 111111 1111100000002267888899 999999999999999999999999888876 677775 77 999
Q ss_pred CCCChHHHHHHHHHHHHhhcC
Q 023416 259 QEEYPAMVAQELYQFLQQTFE 279 (282)
Q Consensus 259 ~~e~p~~~~~~i~~fl~~~~~ 279 (282)
++|+|++|++.|.+||.+..+
T Consensus 356 ~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 356 FLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred HhcCHHHHHHHHHHHHHhhhh
Confidence 999999999999999998754
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=5.1e-26 Score=182.64 Aligned_cols=238 Identities=13% Similarity=0.142 Sum_probs=145.6
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
++||+.. +...|..+++.|++. ||+|+++|+||||.|+... ...+++.+++|+.++++.+..... +.++++
T Consensus 141 ~lHG~~~--~~~~~~~~a~~L~~~----Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~l 212 (395)
T PLN02652 141 IIHGLNE--HSGRYLHFAKQLTSC----GFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENP--GVPCFL 212 (395)
T ss_pred EECCchH--HHHHHHHHHHHHHHC----CCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCC--CCCEEE
Confidence 4788863 456799999999987 8999999999999998753 345788899999999988763222 457999
Q ss_pred EcccHHHHHHHHHHHhCC---CcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHH
Q 023416 80 FGGGHAATLTVRAAKKNL---VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 156 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~---~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
+||||||.+++.++. +| .+++++|+.+|.... .. ... ...... .+...+ .+.. .
T Consensus 213 vGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~--~~------~~~-~~~~~~----------~l~~~~--~p~~-~ 269 (395)
T PLN02652 213 FGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRV--KP------AHP-IVGAVA----------PIFSLV--APRF-Q 269 (395)
T ss_pred EEECHHHHHHHHHHh-ccCcccccceEEEECccccc--cc------chH-HHHHHH----------HHHHHh--CCCC-c
Confidence 999999999998775 44 479999999885210 00 000 000000 000000 0000 0
Q ss_pred HHHhhc-cccCCCCCChHHHHHHHHHHhhcCCCc-ch-HHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCC
Q 023416 157 SQYKSH-VYSNPDNVTPGIVESRYALTKRKGARY-VP-AAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 233 (282)
Q Consensus 157 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~ 233 (282)
+... .........++... .....+.... .. ......... ........++++ ++|+|+++|++|.+++
T Consensus 270 --~~~~~~~~~~~s~~~~~~~---~~~~dp~~~~g~i~~~~~~~~~~---~~~~l~~~L~~I--~vPvLIi~G~~D~vvp 339 (395)
T PLN02652 270 --FKGANKRGIPVSRDPAALL---AKYSDPLVYTGPIRVRTGHEILR---ISSYLTRNFKSV--TVPFMVLHGTADRVTD 339 (395)
T ss_pred --ccCcccccCCcCCCHHHHH---HHhcCCCcccCCchHHHHHHHHH---HHHHHHhhcccC--CCCEEEEEeCCCCCCC
Confidence 0000 00000000111110 1111110000 00 000000000 011134556777 9999999999999999
Q ss_pred HHHHHHHHhccC--CceEEEeCCc-ccCCCC-ChHHHHHHHHHHHHhhcC
Q 023416 234 KAEMEALKGAKG--VTKFVEVPGA-LLPQEE-YPAMVAQELYQFLQQTFE 279 (282)
Q Consensus 234 ~~~~~~~~~~~~--~~~~~~~~~~-H~~~~e-~p~~~~~~i~~fl~~~~~ 279 (282)
.+.++.+.+..+ +.++++++++ |.++.| .++++.+.|.+||.....
T Consensus 340 ~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 340 PLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 998888866533 4789999999 998776 799999999999987654
No 38
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.94 E-value=4.9e-25 Score=162.87 Aligned_cols=242 Identities=11% Similarity=0.111 Sum_probs=151.9
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
++|+.. .++..|..++..|+.. ||.|+++|++|||.|+... ..-+++..++|+..+.+.........+.+.+++
T Consensus 60 ~HG~g~-~~s~~~~~~a~~l~~~----g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~ 134 (313)
T KOG1455|consen 60 CHGYGE-HSSWRYQSTAKRLAKS----GFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLF 134 (313)
T ss_pred EcCCcc-cchhhHHHHHHHHHhC----CCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeee
Confidence 455543 3456788899999998 9999999999999999754 456889999999999987543322248899999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
||||||.+++.++.+.|...+++|+++|.....-.. ...+ .+..++. .+...+ +.++..-.
T Consensus 135 GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~--kp~p-------~v~~~l~------~l~~li----P~wk~vp~ 195 (313)
T KOG1455|consen 135 GESMGGAVALLIALKDPNFWDGAILVAPMCKISEDT--KPHP-------PVISILT------LLSKLI----PTWKIVPT 195 (313)
T ss_pred ecCcchHHHHHHHhhCCcccccceeeecccccCCcc--CCCc-------HHHHHHH------HHHHhC----CceeecCC
Confidence 999999999999999999999999999975321000 0000 0000000 000000 00000000
Q ss_pred hccccCCCCCChHHHHHHH-HHHhhcCCCc--chHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRY-ALTKRKGARY--VPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM 237 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~ 237 (282)
+... +...-+++...... ++..-.+..+ ....+++ ...++.+.+.++ ++|.+|+||++|.++.++..
T Consensus 196 ~d~~-~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr-------~~~~le~~l~~v--tvPflilHG~dD~VTDp~~S 265 (313)
T KOG1455|consen 196 KDII-DVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLR-------VTADLEKNLNEV--TVPFLILHGTDDKVTDPKVS 265 (313)
T ss_pred cccc-ccccCCHHHHHHhhcCCceecCCccHHHHHHHHH-------HHHHHHHhcccc--cccEEEEecCCCcccCcHHH
Confidence 0000 00001111111111 0111111111 1122222 122366777788 99999999999999999999
Q ss_pred HHHHhcc--CCceEEEeCCc-ccCCC----CChHHHHHHHHHHHHhh
Q 023416 238 EALKGAK--GVTKFVEVPGA-LLPQE----EYPAMVAQELYQFLQQT 277 (282)
Q Consensus 238 ~~~~~~~--~~~~~~~~~~~-H~~~~----e~p~~~~~~i~~fl~~~ 277 (282)
+.+.+.. .+.+++++||. |.++. |+-+.|...|.+||+++
T Consensus 266 k~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 266 KELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9887653 46789999999 99774 45567889999999875
No 39
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=2.6e-25 Score=172.09 Aligned_cols=247 Identities=12% Similarity=0.098 Sum_probs=147.8
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCC-CCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~-~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
|+||+.. ++..|.+++..|... ||.|+++|+||||.|. ... ..-+++++.+|+..+++....+.. +.+++
T Consensus 39 l~HG~~E--h~~ry~~la~~l~~~----G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~--~~p~~ 110 (298)
T COG2267 39 LVHGLGE--HSGRYEELADDLAAR----GFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDP--GLPVF 110 (298)
T ss_pred EecCchH--HHHHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCC--CCCeE
Confidence 4567764 567788999999998 9999999999999997 333 334589999999999998864322 78999
Q ss_pred EEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHH
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 158 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (282)
++||||||.+++.++.+++.+++++||.+|...... . ..............+....... ... . .
T Consensus 111 l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~--~---------~~~~~~~~~~~~~~~~~~p~~~-~~~-~-~-- 174 (298)
T COG2267 111 LLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG--A---------ILRLILARLALKLLGRIRPKLP-VDS-N-L-- 174 (298)
T ss_pred EEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh--h---------HHHHHHHHHhcccccccccccc-cCc-c-c--
Confidence 999999999999999999999999999999643210 0 0000000000000000000000 000 0 0
Q ss_pred HhhccccCCCCCChHHHHHHHHH-HhhcCC--CcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCC-H
Q 023416 159 YKSHVYSNPDNVTPGIVESRYAL-TKRKGA--RYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS-K 234 (282)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~-~ 234 (282)
..........-+++..+.+... ....+. ..++......... ........+ ++|+|+++|++|.+++ .
T Consensus 175 -~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~------~~~~~~~~~--~~PvLll~g~~D~vv~~~ 245 (298)
T COG2267 175 -LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRV------PALRDAPAI--ALPVLLLQGGDDRVVDNV 245 (298)
T ss_pred -ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcc------cchhccccc--cCCEEEEecCCCccccCc
Confidence 0000000000111111111110 000000 0111111111110 022223445 8999999999999999 4
Q ss_pred HHHHHH-Hh-ccCCceEEEeCCc-ccCCCCC-h--HHHHHHHHHHHHhhcCC
Q 023416 235 AEMEAL-KG-AKGVTKFVEVPGA-LLPQEEY-P--AMVAQELYQFLQQTFEP 280 (282)
Q Consensus 235 ~~~~~~-~~-~~~~~~~~~~~~~-H~~~~e~-p--~~~~~~i~~fl~~~~~~ 280 (282)
+...++ .+ ..++.++++++|+ |.++.|. . +++.+.+.+|+.+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 246 EGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred HHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 555544 33 3567789999999 9988774 5 88999999999886543
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=3.4e-25 Score=204.58 Aligned_cols=246 Identities=16% Similarity=0.179 Sum_probs=151.7
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--------CCCchHHHHHHHHHHhhCCCCCCcC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--------MDYNADVMEKFVVDLINAPDSPVSS 72 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~~l~~~i~~l~~~~~~ 72 (282)
||||+.. +...|.++++.|++. |+|+++|+||||.|+.+. ..++++.+++++.+++++++
T Consensus 1376 llHG~~~--s~~~w~~~~~~L~~~-----~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~----- 1443 (1655)
T PLN02980 1376 FLHGFLG--TGEDWIPIMKAISGS-----ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHIT----- 1443 (1655)
T ss_pred EECCCCC--CHHHHHHHHHHHhCC-----CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhC-----
Confidence 5788874 456899999999886 999999999999997532 35789999999999999987
Q ss_pred CCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcH
Q 023416 73 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 152 (282)
Q Consensus 73 ~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
..+++++||||||.+++.++.++|++|+++|++++... +... . . ........ ......+... ...
T Consensus 1444 -~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~--~~~~------~--~-~~~~~~~~-~~~~~~l~~~--g~~ 1508 (1655)
T PLN02980 1444 -PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPG--LKDE------V--A-RKIRSAKD-DSRARMLIDH--GLE 1508 (1655)
T ss_pred -CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCc--cCch------H--H-HHHHhhhh-hHHHHHHHhh--hHH
Confidence 67899999999999999999999999999999976321 1000 0 0 00000000 0000000000 000
Q ss_pred HHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCC
Q 023416 153 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 232 (282)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~ 232 (282)
.....++....+.. ....+............ .........+...... ...+..+.++++ ++|+|+|+|++|...
T Consensus 1509 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~--~~~dl~~~L~~I--~~PtLlI~Ge~D~~~ 1582 (1655)
T PLN02980 1509 IFLENWYSGELWKS-LRNHPHFNKIVASRLLH-KDVPSLAKLLSDLSIG--RQPSLWEDLKQC--DTPLLLVVGEKDVKF 1582 (1655)
T ss_pred HHHHHhccHHHhhh-hccCHHHHHHHHHHHhc-CCHHHHHHHHHHhhhc--ccchHHHHHhhC--CCCEEEEEECCCCcc
Confidence 01111111000000 00111111111111111 1111111111111000 111245678888 999999999999877
Q ss_pred CHHHHHHHHhccCC------------ceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhcCC
Q 023416 233 SKAEMEALKGAKGV------------TKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEP 280 (282)
Q Consensus 233 ~~~~~~~~~~~~~~------------~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~~~ 280 (282)
+ +.++++.+.+++ +++++++++ |++++|+|++|++.|.+||.+....
T Consensus 1583 ~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1583 K-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred H-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcccc
Confidence 5 556666655544 579999999 9999999999999999999986544
No 41
>PLN02511 hydrolase
Probab=99.93 E-value=2.2e-24 Score=173.95 Aligned_cols=243 Identities=11% Similarity=0.108 Sum_probs=141.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
|+||+...+....+..++..+.+. ||+|+++|+||||.|......+....+++|+.++++++..... ..+++++
T Consensus 105 llHG~~g~s~~~y~~~~~~~~~~~----g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~~~lv 178 (388)
T PLN02511 105 LLPGLTGGSDDSYVRHMLLRARSK----GWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYP--SANLYAA 178 (388)
T ss_pred EECCCCCCCCCHHHHHHHHHHHHC----CCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCC--CCCEEEE
Confidence 578887655433345677777766 8999999999999998643333446778888888888763221 4689999
Q ss_pred cccHHHHHHHHHHHhCCCc--ccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHH
Q 023416 81 GGGHAATLTVRAAKKNLVK--PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 158 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (282)
||||||.+++.++.+++++ |.++++++++... .. ....+...+. ......+...+ ......
T Consensus 179 G~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l--~~----------~~~~~~~~~~-~~y~~~~~~~l---~~~~~~- 241 (388)
T PLN02511 179 GWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL--VI----------ADEDFHKGFN-NVYDKALAKAL---RKIFAK- 241 (388)
T ss_pred EechhHHHHHHHHHhcCCCCCceEEEEECCCcCH--HH----------HHHHHhccHH-HHHHHHHHHHH---HHHHHH-
Confidence 9999999999999998877 7888887764310 00 0000000000 00000000000 000000
Q ss_pred HhhccccC-CCCCChHH------HHHHHHHHhhcC-CCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCC
Q 023416 159 YKSHVYSN-PDNVTPGI------VESRYALTKRKG-ARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 230 (282)
Q Consensus 159 ~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~ 230 (282)
....+.. ........ +..+........ .......++.. . .....++++ ++|+|+|+|++|+
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~---~-----s~~~~L~~I--~vPtLiI~g~dDp 310 (388)
T PLN02511 242 -HALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSN---S-----SSSDSIKHV--RVPLLCIQAANDP 310 (388)
T ss_pred -HHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHH---c-----CchhhhccC--CCCeEEEEcCCCC
Confidence 0000000 00011110 000111111110 00001111100 0 124567778 9999999999999
Q ss_pred CCCHHHH-HHHHhccCCceEEEeCCc-ccCCCCChHH------HHHHHHHHHHhh
Q 023416 231 RRSKAEM-EALKGAKGVTKFVEVPGA-LLPQEEYPAM------VAQELYQFLQQT 277 (282)
Q Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~~~~~-H~~~~e~p~~------~~~~i~~fl~~~ 277 (282)
+++.+.. ....+..++++++++++| |+.++|+|+. +.+.|.+||+..
T Consensus 311 i~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 311 IAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred cCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 9987654 445667899999999998 9999999986 489999999764
No 42
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.92 E-value=4.8e-25 Score=152.55 Aligned_cols=226 Identities=16% Similarity=0.193 Sum_probs=154.6
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHH---HHHHHHhhCCCCCCcCCCCce
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME---KFVVDLINAPDSPVSSSESDL 77 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~---~~l~~~i~~l~~~~~~~~~~~ 77 (282)
+|||.-+ |++.+|.+++..|-+. ..++|++.|.||||.|.+|...+..+.+. ++..+++++|. -.++
T Consensus 47 lipGalG-s~~tDf~pql~~l~k~---l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk------~~~f 116 (277)
T KOG2984|consen 47 LIPGALG-SYKTDFPPQLLSLFKP---LQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALK------LEPF 116 (277)
T ss_pred ecccccc-cccccCCHHHHhcCCC---CceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhC------CCCe
Confidence 4677764 6789999988888765 24999999999999999888767666554 45667788888 6889
Q ss_pred EEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHH
Q 023416 78 VIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQS 157 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
.++|+|=||..|+..|.++++.|+++|+.+.... ... .+...+..+ ....+
T Consensus 117 svlGWSdGgiTalivAak~~e~v~rmiiwga~ay--vn~-----------------------~~~ma~kgi----Rdv~k 167 (277)
T KOG2984|consen 117 SVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAY--VNH-----------------------LGAMAFKGI----RDVNK 167 (277)
T ss_pred eEeeecCCCeEEEEeeccChhhhhhheeecccce--ecc-----------------------hhHHHHhch----HHHhh
Confidence 9999999999999999999999999999876321 000 000111111 00111
Q ss_pred HHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHH
Q 023416 158 QYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM 237 (282)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~ 237 (282)
|..+..-.-......+.....+....+ +..++. ...+ ..-++..++++ +||++|++|++|++++...+
T Consensus 168 Ws~r~R~P~e~~Yg~e~f~~~wa~wvD-----~v~qf~-~~~d----G~fCr~~lp~v--kcPtli~hG~kDp~~~~~hv 235 (277)
T KOG2984|consen 168 WSARGRQPYEDHYGPETFRTQWAAWVD-----VVDQFH-SFCD----GRFCRLVLPQV--KCPTLIMHGGKDPFCGDPHV 235 (277)
T ss_pred hhhhhcchHHHhcCHHHHHHHHHHHHH-----HHHHHh-hcCC----CchHhhhcccc--cCCeeEeeCCcCCCCCCCCc
Confidence 100000000001122222222222111 011111 1111 11167778888 99999999999999999999
Q ss_pred HHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 238 EALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
..+....+.+++.+.|.| |.+|+..+++|+..+.+||++.
T Consensus 236 ~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 236 CFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred cchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 999999999999999999 9999999999999999999874
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.92 E-value=5.5e-25 Score=188.57 Aligned_cols=249 Identities=12% Similarity=0.115 Sum_probs=138.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--CCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
|+||+. +++..|+++++.|++ ||+|+++|+||||.|+.+. ..|+++++++|+.+++++++. ..+++
T Consensus 30 llHG~~--~~~~~w~~~~~~L~~-----~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~-----~~~~~ 97 (582)
T PRK05855 30 LVHGYP--DNHEVWDGVAPLLAD-----RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSP-----DRPVH 97 (582)
T ss_pred EEcCCC--chHHHHHHHHHHhhc-----ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCC-----CCcEE
Confidence 578886 466789999999965 4999999999999998643 568999999999999999873 45699
Q ss_pred EEcccHHHHHHHHHHHh--CCCcccceeeecCCCCCCCCccccCCC---chhhhhhhhhhhhc--------CcchhhhHH
Q 023416 79 IFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTWAGPLPIVFGRDS---SMETRYGLLRGTLR--------APGVGWMMY 145 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~--~~~~v~~lvl~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------~~~~~~~~~ 145 (282)
|+||||||.+++.++.+ .+.++..++.+++.............. .............. .+......+
T Consensus 98 lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (582)
T PRK05855 98 LLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLW 177 (582)
T ss_pred EEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHh
Confidence 99999999999888765 233444444433211000000000000 00000000000000 000000000
Q ss_pred hhhhhcHHHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEe
Q 023416 146 NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 225 (282)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~ 225 (282)
... .......... .......... ...............+........ ....+..+ ++|+++|+
T Consensus 178 ~~~--~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~P~lii~ 240 (582)
T PRK05855 178 RLG--LGRAWPRLLR-----RVEGTPVDPI---PTQTTLSDGAHGVKLYRANMIRSL-----SRPRERYT--DVPVQLIV 240 (582)
T ss_pred ccc--hhhHHHHhhh-----hccCCCcchh---hhhhhhccccchHHHHHhhhhhhh-----ccCccCCc--cCceEEEE
Confidence 000 0000000000 0000000000 000000000000000000000000 11113335 89999999
Q ss_pred cCCCCCCCHHHHHHHHhccCCceEEEeCCcccCCCCChHHHHHHHHHHHHhhc
Q 023416 226 TEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 226 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
|++|.+++.+..+.+.+..++.+++++++||+++.|+|+++++.|.+|+.+..
T Consensus 241 G~~D~~v~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 241 PTGDPYVRPALYDDLSRWVPRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred eCCCcccCHHHhccccccCCcceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 99999999999998888888888888886699999999999999999998754
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.91 E-value=7.6e-23 Score=161.95 Aligned_cols=231 Identities=10% Similarity=0.037 Sum_probs=131.2
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--C--CCchHHHHHHHHHHhhCCCCC-----------------CcCC
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--M--DYNADVMEKFVVDLINAPDSP-----------------VSSS 73 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--~--~~~~~~~~~~l~~~i~~l~~~-----------------~~~~ 73 (282)
..+++.|.+. ||+|+++|+||||+|+... . ..+++++++|+.++++.+... ....
T Consensus 64 ~~~~~~l~~~----G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (332)
T TIGR01607 64 DSWIENFNKN----GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKE 139 (332)
T ss_pred HHHHHHHHHC----CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccccc
Confidence 4678999988 8999999999999998532 1 147899999999999865321 0011
Q ss_pred -CCceEEEcccHHHHHHHHHHHhCCC--------cccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhH
Q 023416 74 -ESDLVIFGGGHAATLTVRAAKKNLV--------KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM 144 (282)
Q Consensus 74 -~~~~~l~G~s~G~~~a~~~~~~~~~--------~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (282)
+.+++++||||||.+++.++.+++. .++++|+++|......... . .... ...... .+
T Consensus 140 ~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~-~-~~~~--~~~~~~----------~l 205 (332)
T TIGR01607 140 NRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGS-D-DSFK--FKYFYL----------PV 205 (332)
T ss_pred CCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccC-C-Ccch--hhhhHH----------HH
Confidence 5689999999999999999875432 5889998888532100000 0 0000 000000 00
Q ss_pred HhhhhhcHHHHHHHHhhccccCCCC--CChHHHHHHHH-HHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccE
Q 023416 145 YNMLVSNEKAIQSQYKSHVYSNPDN--VTPGIVESRYA-LTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPL 221 (282)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~ 221 (282)
.. .+..+........... ..+...+.+.. .... ... ....+...+.. ........+++++.++|+
T Consensus 206 ~~-------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~-~~~-~s~~~~~~l~~---~~~~~~~~~~~i~~~~P~ 273 (332)
T TIGR01607 206 MN-------FMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRY-DGG-ITFNLASELIK---ATDTLDCDIDYIPKDIPI 273 (332)
T ss_pred HH-------HHHHHCCcccccCccccccChhhhhHHhcCcccc-CCc-ccHHHHHHHHH---HHHHHHhhHhhCCCCCCE
Confidence 00 0000000000000000 01111111110 0000 000 00111111110 001122233333236899
Q ss_pred EEEecCCCCCCCHHHHHHHHhc--cCCceEEEeCCc-ccCCCCC-hHHHHHHHHHHHH
Q 023416 222 LVVSTEGSPRRSKAEMEALKGA--KGVTKFVEVPGA-LLPQEEY-PAMVAQELYQFLQ 275 (282)
Q Consensus 222 lii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~-H~~~~e~-p~~~~~~i~~fl~ 275 (282)
|+++|++|.+++.+..+.+.+. .++.++++++++ |.++.|. ++++.+.|.+||.
T Consensus 274 Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 274 LFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred EEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 9999999999999888887654 357889999999 9998885 7999999999985
No 45
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=2.3e-24 Score=163.21 Aligned_cols=222 Identities=16% Similarity=0.122 Sum_probs=132.3
Q ss_pred eEEEEecCCCCCCCCC---C-CCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceee
Q 023416 30 WRATIVDWPGLGYSDR---P-KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAA 105 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~---~-~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl 105 (282)
|+|+++|+||+|.|++ . ...++.+++++++..+++.++ ..+++++||||||.+++.++..+|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALG------IKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHT------TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhC------CCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7999999999999994 2 378999999999999999998 56799999999999999999999999999999
Q ss_pred ecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhh-hhcHHHHHHHHhh-ccccCCCCCChHHHHHHHHHHh
Q 023416 106 VAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNML-VSNEKAIQSQYKS-HVYSNPDNVTPGIVESRYALTK 183 (282)
Q Consensus 106 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 183 (282)
+++.. ..+... ...................... ............. ..+. .....+...........
T Consensus 75 ~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 143 (230)
T PF00561_consen 75 ISPPP--DLPDGL--------WNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYD-REFVEDFLKQFQSQQYA 143 (230)
T ss_dssp ESESS--HHHHHH--------HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTHHHHHHHHHHH
T ss_pred Eeeec--cchhhh--------hHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeecc-Cccccchhhccchhhhh
Confidence 98741 000000 0000000000000000000000 0000000000000 0000 00000000000000000
Q ss_pred hcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc-ccCCCCC
Q 023416 184 RKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEY 262 (282)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~ 262 (282)
............. .........+....++++ ++|+++++|++|..+|.+....+.+..|+.++++++++ |+.+++.
T Consensus 144 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i--~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 144 RFAETDAFDNMFW-NALGYFSVWDPSPALSNI--KVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HTCHHHHHHHHHH-HHHHHHHHHHHHHHHTTT--TSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHS
T ss_pred HHHHHHHHhhhcc-cccccccccccccccccc--CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcC
Confidence 0000000000000 000000122345667777 99999999999999999999999999999999999997 9999999
Q ss_pred hHHHHHHHH
Q 023416 263 PAMVAQELY 271 (282)
Q Consensus 263 p~~~~~~i~ 271 (282)
|+++++.|.
T Consensus 221 ~~~~~~~i~ 229 (230)
T PF00561_consen 221 PDEFNEIII 229 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHhhhhhhc
Confidence 999999885
No 46
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.90 E-value=1.4e-22 Score=159.59 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=77.0
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--CCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
|+||+.+.+.. ..+...+... +|+|+++|+||||.|+.+. ..++.+++++++..++++++ ..+++
T Consensus 32 llHG~~~~~~~---~~~~~~~~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~------~~~~~ 98 (306)
T TIGR01249 32 FLHGGPGSGTD---PGCRRFFDPE----TYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLG------IKNWL 98 (306)
T ss_pred EECCCCCCCCC---HHHHhccCcc----CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcC------CCCEE
Confidence 46776543322 2333444433 5999999999999998653 35788899999999999987 56899
Q ss_pred EEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
++||||||.+++.++.++|++|+++|++++.
T Consensus 99 lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 99 VFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred EEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 9999999999999999999999999999874
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.90 E-value=5.4e-22 Score=149.26 Aligned_cols=245 Identities=13% Similarity=0.085 Sum_probs=153.1
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
++||+. .|...|+.+...|++.. |..|+++|.|-||.|... ..++...+++|+..||+..+.... ..+++++
T Consensus 57 ~lHGl~--GS~~Nw~sv~k~Ls~~l---~~~v~~vd~RnHG~Sp~~-~~h~~~~ma~dv~~Fi~~v~~~~~--~~~~~l~ 128 (315)
T KOG2382|consen 57 ILHGLL--GSKENWRSVAKNLSRKL---GRDVYAVDVRNHGSSPKI-TVHNYEAMAEDVKLFIDGVGGSTR--LDPVVLL 128 (315)
T ss_pred Eecccc--cCCCCHHHHHHHhcccc---cCceEEEecccCCCCccc-cccCHHHHHHHHHHHHHHcccccc--cCCceec
Confidence 467886 46699999999999973 689999999999999764 456789999999999998863211 5689999
Q ss_pred cccHHH-HHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHH
Q 023416 81 GGGHAA-TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQY 159 (282)
Q Consensus 81 G~s~G~-~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
|||||| .+++..+...|+.+.++|++.-+.. ..+...+ .....+..+...+..... .. ...+....+
T Consensus 129 GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~-~~~~~~~------e~~e~i~~m~~~d~~~~~-~~---~rke~~~~l- 196 (315)
T KOG2382|consen 129 GHSMGGVKVAMAETLKKPDLIERLIVEDISPG-GVGRSYG------EYRELIKAMIQLDLSIGV-SR---GRKEALKSL- 196 (315)
T ss_pred ccCcchHHHHHHHHHhcCcccceeEEEecCCc-cCCcccc------hHHHHHHHHHhccccccc-cc---cHHHHHHHH-
Confidence 999999 7777777789999999999864321 1111111 122222222221111000 00 001111111
Q ss_pred hhccccCCCCCChHHHHHHHHHHhh-c--------CCCcchHHHhhccCCCCCCHHHHHHHh--hcccCCccEEEEecCC
Q 023416 160 KSHVYSNPDNVTPGIVESRYALTKR-K--------GARYVPAAFLTGLLDPVNSREEFLQLF--ADLEGKLPLLVVSTEG 228 (282)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~P~lii~G~~ 228 (282)
.... .+....+........ + ........++..+.... ....+ ... ..||+++.|.+
T Consensus 197 ~~~~------~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s-----~~~~l~~~~~--~~pvlfi~g~~ 263 (315)
T KOG2382|consen 197 IEVG------FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILS-----YWADLEDGPY--TGPVLFIKGLQ 263 (315)
T ss_pred HHHh------cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhc-----cccccccccc--ccceeEEecCC
Confidence 1000 001111111111110 0 00011111111110000 11111 333 79999999999
Q ss_pred CCCCCHHHHHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhc
Q 023416 229 SPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
+.+++.+....+.+.+|++++++++++ ||+|.|+|++|.+.|.+|+.+..
T Consensus 264 S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 264 SKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred CCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 999999999999999999999999977 99999999999999999997653
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.89 E-value=3.6e-21 Score=156.01 Aligned_cols=204 Identities=15% Similarity=0.187 Sum_probs=132.0
Q ss_pred ccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHH
Q 023416 11 VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTV 90 (282)
Q Consensus 11 ~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~ 90 (282)
...|..+++.|+++ ||.|+++|+||||.|...............+.+++..... .-..++.++|||+||.+++
T Consensus 208 ~~~~~~~~~~La~~----Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~---vd~~ri~l~G~S~GG~~Al 280 (414)
T PRK05077 208 TDYYRLFRDYLAPR----GIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPW---VDHTRVAAFGFRFGANVAV 280 (414)
T ss_pred hhhHHHHHHHHHhC----CCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcc---cCcccEEEEEEChHHHHHH
Confidence 35688889999998 9999999999999997532233444445556666655421 0146899999999999999
Q ss_pred HHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCCCCC
Q 023416 91 RAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNV 170 (282)
Q Consensus 91 ~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (282)
.++..+|.+++++|+++|.....+.. ... ... .+......+... +.. ...
T Consensus 281 ~~A~~~p~ri~a~V~~~~~~~~~~~~-----------~~~--------------~~~---~p~~~~~~la~~-lg~-~~~ 330 (414)
T PRK05077 281 RLAYLEPPRLKAVACLGPVVHTLLTD-----------PKR--------------QQQ---VPEMYLDVLASR-LGM-HDA 330 (414)
T ss_pred HHHHhCCcCceEEEEECCccchhhcc-----------hhh--------------hhh---chHHHHHHHHHH-hCC-CCC
Confidence 99999999999999998753210000 000 000 000011111100 000 011
Q ss_pred ChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHh-hcccCCccEEEEecCCCCCCCHHHHHHHHhccCCceE
Q 023416 171 TPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF-ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKF 249 (282)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 249 (282)
+.+.+.... ..+. . . ....+ +++ ++|+|+|+|++|+++|.+..+.+.+..++.++
T Consensus 331 ~~~~l~~~l----------------~~~s-l--~---~~~~l~~~i--~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l 386 (414)
T PRK05077 331 SDEALRVEL----------------NRYS-L--K---VQGLLGRRC--PTPMLSGYWKNDPFSPEEDSRLIASSSADGKL 386 (414)
T ss_pred ChHHHHHHh----------------hhcc-c--h---hhhhhccCC--CCcEEEEecCCCCCCCHHHHHHHHHhCCCCeE
Confidence 111111100 0000 0 0 00111 456 89999999999999999999999988999999
Q ss_pred EEeCCcccCCCCChHHHHHHHHHHHHhh
Q 023416 250 VEVPGALLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 250 ~~~~~~H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
++++++ ++.+.++++.+.|.+||.+.
T Consensus 387 ~~i~~~--~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 387 LEIPFK--PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred EEccCC--CccCCHHHHHHHHHHHHHHH
Confidence 999997 45679999999999999864
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.89 E-value=3e-21 Score=149.14 Aligned_cols=219 Identities=15% Similarity=0.168 Sum_probs=131.4
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHH
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLT 89 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a 89 (282)
++..|..+++.|++. ||+|+++|+||||.|+.. .++.+++.+|+.++++.+..... ...+++++||||||.++
T Consensus 42 ~~~~~~~la~~l~~~----G~~v~~~Dl~G~G~S~~~--~~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a 114 (274)
T TIGR03100 42 SHRQFVLLARRLAEA----GFPVLRFDYRGMGDSEGE--NLGFEGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAA 114 (274)
T ss_pred chhHHHHHHHHHHHC----CCEEEEeCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHH
Confidence 344577889999988 899999999999999753 25677888888888877642110 03569999999999999
Q ss_pred HHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCCCC
Q 023416 90 VRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDN 169 (282)
Q Consensus 90 ~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (282)
+.++.. +.+|+++|+++|..... .. . ....+. ....... ......+.. +.. .
T Consensus 115 ~~~a~~-~~~v~~lil~~p~~~~~-~~------~---~~~~~~---------~~~~~~~-~~~~~~~~~-----~~g--~ 166 (274)
T TIGR03100 115 LLYAPA-DLRVAGLVLLNPWVRTE-AA------Q---AASRIR---------HYYLGQL-LSADFWRKL-----LSG--E 166 (274)
T ss_pred HHHhhh-CCCccEEEEECCccCCc-cc------c---hHHHHH---------HHHHHHH-hChHHHHHh-----cCC--C
Confidence 999764 46799999999852110 00 0 000000 0111100 011111111 111 1
Q ss_pred CCh-HHHHHHHHHH--h-hcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHH------HH
Q 023416 170 VTP-GIVESRYALT--K-RKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM------EA 239 (282)
Q Consensus 170 ~~~-~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~------~~ 239 (282)
.+- +....+.... . .......... ...++...+.++ ++|+++++|++|...+ +.. ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~--~~P~ll~~g~~D~~~~-~~~~~~~~~~~ 233 (274)
T TIGR03100 167 VNLGSSLRGLGDALLKARQKGDEVAHGG----------LAERMKAGLERF--QGPVLFILSGNDLTAQ-EFADSVLGEPA 233 (274)
T ss_pred ccHHHHHHHHHHHHHhhhhcCCCcccch----------HHHHHHHHHHhc--CCcEEEEEcCcchhHH-HHHHHhccChh
Confidence 111 1111111100 0 0010000000 223356677788 9999999999998754 333 33
Q ss_pred HHhcc--CCceEEEeCCc-ccCCCC-ChHHHHHHHHHHHHh
Q 023416 240 LKGAK--GVTKFVEVPGA-LLPQEE-YPAMVAQELYQFLQQ 276 (282)
Q Consensus 240 ~~~~~--~~~~~~~~~~~-H~~~~e-~p~~~~~~i~~fl~~ 276 (282)
+.+.. ++++++.++++ |++..| .++++.+.|.+||++
T Consensus 234 ~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 234 WRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 44433 78899999999 998555 569999999999963
No 50
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=1.1e-21 Score=138.19 Aligned_cols=220 Identities=10% Similarity=0.112 Sum_probs=148.6
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
||+|+- .+..+.+.+.+.|.++ ||+|++|-+||||.....-..++.++|.+++.+-.++|... ...+|.++
T Consensus 20 llHGFT--Gt~~Dvr~Lgr~L~e~----GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~---gy~eI~v~ 90 (243)
T COG1647 20 LLHGFT--GTPRDVRMLGRYLNEN----GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA---GYDEIAVV 90 (243)
T ss_pred EEeccC--CCcHHHHHHHHHHHHC----CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc---CCCeEEEE
Confidence 577885 5778899999999998 99999999999997643336789999999988887777521 05789999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
|-||||.+++.++.++| ++++|.++++...- . ....+. .+..+ .+. ..
T Consensus 91 GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k--------~----~~~iie----------~~l~y-------~~~-~k 138 (243)
T COG1647 91 GLSMGGVFALKLAYHYP--PKKIVPMCAPVNVK--------S----WRIIIE----------GLLEY-------FRN-AK 138 (243)
T ss_pred eecchhHHHHHHHhhCC--ccceeeecCCcccc--------c----chhhhH----------HHHHH-------HHH-hh
Confidence 99999999999999988 56999998753100 0 000000 00000 000 00
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 240 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~ 240 (282)
.....+.+.++..+...... .......+.. ........+..| ..|++++.|++|..++.+.+..+
T Consensus 139 -----k~e~k~~e~~~~e~~~~~~~-~~~~~~~~~~-------~i~~~~~~~~~I--~~pt~vvq~~~D~mv~~~sA~~I 203 (243)
T COG1647 139 -----KYEGKDQEQIDKEMKSYKDT-PMTTTAQLKK-------LIKDARRSLDKI--YSPTLVVQGRQDEMVPAESANFI 203 (243)
T ss_pred -----hccCCCHHHHHHHHHHhhcc-hHHHHHHHHH-------HHHHHHhhhhhc--ccchhheecccCCCCCHHHHHHH
Confidence 11233444444444333211 1111111111 111255667777 99999999999999999999888
Q ss_pred Hhcc--CCceEEEeCCc-ccC-CCCChHHHHHHHHHHHHh
Q 023416 241 KGAK--GVTKFVEVPGA-LLP-QEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 241 ~~~~--~~~~~~~~~~~-H~~-~~e~p~~~~~~i~~fl~~ 276 (282)
.+.. ...++..++++ |.+ +.+..+++.+.|..||+.
T Consensus 204 y~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 204 YDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 7643 35679999999 985 455789999999999963
No 51
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=7.4e-21 Score=152.37 Aligned_cols=231 Identities=10% Similarity=0.024 Sum_probs=136.1
Q ss_pred CeEEEEecCCCCCCCCC------------C--------C-CCCchHHHHHHHHHHhhCCCCCCcCCCCceE-EEcccHHH
Q 023416 29 NWRATIVDWPGLGYSDR------------P--------K-MDYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAA 86 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~------------~--------~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~-l~G~s~G~ 86 (282)
.|.||++|..|-|.|.. | + ..+|++++++++.+++++++ ..++. ++||||||
T Consensus 99 ~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lg------i~~~~~vvG~SmGG 172 (389)
T PRK06765 99 KYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLG------IARLHAVMGPSMGG 172 (389)
T ss_pred ceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcC------CCCceEEEEECHHH
Confidence 49999999999765321 1 1 24899999999999999998 56665 99999999
Q ss_pred HHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCch-hhhhh-hhhhhhcCcch-------------hhhHHh----h
Q 023416 87 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSM-ETRYG-LLRGTLRAPGV-------------GWMMYN----M 147 (282)
Q Consensus 87 ~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~-------------~~~~~~----~ 147 (282)
++++.++.++|++|+++|+++...... . .. ..... ....+...|.+ +-.... .
T Consensus 173 ~ial~~a~~~P~~v~~lv~ia~~~~~~--~------~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~ 244 (389)
T PRK06765 173 MQAQEWAVHYPHMVERMIGVIGNPQND--A------WTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTM 244 (389)
T ss_pred HHHHHHHHHChHhhheEEEEecCCCCC--h------hHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHH
Confidence 999999999999999999998642210 0 00 00011 11111111110 000000 0
Q ss_pred hhhcHHHHHHHHhhcc--ccCC--CCCChHHHHHHHH----HHhhc-CCCcchHHHhhcc--CCCCCCHHHHHHHhhccc
Q 023416 148 LVSNEKAIQSQYKSHV--YSNP--DNVTPGIVESRYA----LTKRK-GARYVPAAFLTGL--LDPVNSREEFLQLFADLE 216 (282)
Q Consensus 148 ~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~ 216 (282)
....+..+...+.+.. ..++ .......++.+.. ..... +... +..+.+.+ .+......++.+.+.++
T Consensus 245 ~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~-~l~l~~a~~~~d~g~~~~dl~~~L~~I- 322 (389)
T PRK06765 245 NAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANH-WLYLAKAVQLFDAGHGFSSLEEALSNI- 322 (389)
T ss_pred HcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhh-HHHHHHHHHhcCCccccCCHHHHHhcC-
Confidence 0011122111111100 0000 0000111222221 11111 1111 11111111 11100112367788888
Q ss_pred CCccEEEEecCCCCCCCHHHHHHHHhccC----CceEEEeCC-c-ccCCCCChHHHHHHHHHHHHh
Q 023416 217 GKLPLLVVSTEGSPRRSKAEMEALKGAKG----VTKFVEVPG-A-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 217 ~~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~-~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
++|+++|+|++|.++|.+..+.+.+.++ +++++++++ + |++++|+|+++++.|.+||++
T Consensus 323 -~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 323 -EANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred -CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9999999999999999999888887775 688999986 6 999999999999999999975
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=4.3e-21 Score=151.95 Aligned_cols=241 Identities=8% Similarity=0.049 Sum_probs=133.2
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
++||+.+.+....+..+++.|.+. ||+|+++|+||||.|.... ..++.. ..+|+..+++.+..... ..++++
T Consensus 63 l~HG~~g~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~g~~~~~~~~~~~~~-~~~D~~~~i~~l~~~~~--~~~~~~ 135 (324)
T PRK10985 63 LFHGLEGSFNSPYAHGLLEAAQKR----GWLGVVMHFRGCSGEPNRLHRIYHSG-ETEDARFFLRWLQREFG--HVPTAA 135 (324)
T ss_pred EeCCCCCCCcCHHHHHHHHHHHHC----CCEEEEEeCCCCCCCccCCcceECCC-chHHHHHHHHHHHHhCC--CCCEEE
Confidence 478887554444456789999988 9999999999999875421 222221 23444444433321100 568999
Q ss_pred EcccHHHHHHHHHHHhCCCc--ccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHH
Q 023416 80 FGGGHAATLTVRAAKKNLVK--PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQS 157 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
+||||||.+++.++.+++.. +.++|+++++.... . ....+..... ......+...+ ......
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~--~----------~~~~~~~~~~-~~~~~~l~~~l---~~~~~~ 199 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLE--A----------CSYRMEQGFS-RVYQRYLLNLL---KANAAR 199 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHH--H----------HHHHHhhhHH-HHHHHHHHHHH---HHHHHH
Confidence 99999999988888766543 78888888753210 0 0000000000 00001111111 011111
Q ss_pred HHhhccccCCCCCChHHHH------HHHHHHhhc--CCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCC
Q 023416 158 QYKSHVYSNPDNVTPGIVE------SRYALTKRK--GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGS 229 (282)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D 229 (282)
.... +......+.+.+. .+......+ +... ...++. .. .....++++ ++|+++|+|++|
T Consensus 200 ~~~~--~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~-~~~~y~---~~-----~~~~~l~~i--~~P~lii~g~~D 266 (324)
T PRK10985 200 KLAA--YPGTLPINLAQLKSVRRLREFDDLITARIHGFAD-AIDYYR---QC-----SALPLLNQI--RKPTLIIHAKDD 266 (324)
T ss_pred HHHh--ccccccCCHHHHhcCCcHHHHhhhheeccCCCCC-HHHHHH---HC-----ChHHHHhCC--CCCEEEEecCCC
Confidence 1110 1111111211111 111111111 1111 111111 11 134667788 999999999999
Q ss_pred CCCCHHHHHHHHhccCCceEEEeCCc-ccCCCCCh-----HHHHHHHHHHHHhh
Q 023416 230 PRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYP-----AMVAQELYQFLQQT 277 (282)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p-----~~~~~~i~~fl~~~ 277 (282)
++++.+..+.+.+..++.+++++++| |+.+.|.. --.-+.+.+|+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 267 PFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 99998888877777888999999998 99998742 24566777777654
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.83 E-value=4.5e-19 Score=142.06 Aligned_cols=89 Identities=13% Similarity=0.117 Sum_probs=69.8
Q ss_pred chHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHH-HHHHhhCCCCCCcCCCCceEEEcccHHHHHHHH
Q 023416 13 EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF-VVDLINAPDSPVSSSESDLVIFGGGHAATLTVR 91 (282)
Q Consensus 13 ~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~-l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~ 91 (282)
.|+.+++.|.+. ||+|+++|++|+|.|+. .+++++++.+ +.+.++.+..... ..+++++||||||.+++.
T Consensus 82 ~~~~~~~~L~~~----G~~V~~~D~~g~g~s~~---~~~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS~GG~i~~~ 152 (350)
T TIGR01836 82 EDRSLVRGLLER----GQDVYLIDWGYPDRADR---YLTLDDYINGYIDKCVDYICRTSK--LDQISLLGICQGGTFSLC 152 (350)
T ss_pred CCchHHHHHHHC----CCeEEEEeCCCCCHHHh---cCCHHHHHHHHHHHHHHHHHHHhC--CCcccEEEECHHHHHHHH
Confidence 357899999998 99999999999998764 3567777643 5444443321101 578999999999999999
Q ss_pred HHHhCCCcccceeeecCCC
Q 023416 92 AAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 92 ~~~~~~~~v~~lvl~~p~~ 110 (282)
++..+|++++++|+++|+.
T Consensus 153 ~~~~~~~~v~~lv~~~~p~ 171 (350)
T TIGR01836 153 YAALYPDKIKNLVTMVTPV 171 (350)
T ss_pred HHHhCchheeeEEEecccc
Confidence 9999999999999998864
No 54
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.83 E-value=1.7e-19 Score=148.47 Aligned_cols=247 Identities=11% Similarity=0.028 Sum_probs=136.3
Q ss_pred CCCcccCcccccchH-----HHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC--CCCchHHHHHHHHHHhhCCCCCCcCC
Q 023416 1 MIPTISDVSTVEEWR-----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSSS 73 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~-----~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~i~~l~~~~~~~ 73 (282)
|+|++. ...+.|+ .+++.|.+. ||+|+++|++|+|.|.... .+|..+.+.+.+..+.+.++
T Consensus 193 iVp~~i--~k~yilDL~p~~Slv~~L~~q----Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g------ 260 (532)
T TIGR01838 193 IVPPWI--NKYYILDLRPQNSLVRWLVEQ----GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITG------ 260 (532)
T ss_pred EECccc--ccceeeecccchHHHHHHHHC----CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcC------
Confidence 467775 4556664 799999998 8999999999999986532 34555566666777777776
Q ss_pred CCceEEEcccHHHHHHH----HHHHhC-CCcccceeeecCCCCCCCCccccC---CCchhhhhhhhhhhhcCcch-hhhH
Q 023416 74 ESDLVIFGGGHAATLTV----RAAKKN-LVKPTAIAAVAPTWAGPLPIVFGR---DSSMETRYGLLRGTLRAPGV-GWMM 144 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~----~~~~~~-~~~v~~lvl~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~ 144 (282)
..+++++||||||.++. .++..+ +++|++++++++.....-+...+. ..............-..|.. -...
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~ 340 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVT 340 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHH
Confidence 78899999999999852 245555 788999999987532111110000 00000000111100000100 0112
Q ss_pred HhhhhhcHHHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccC-C-----CCCCHHHHHHHhhcccCC
Q 023416 145 YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLL-D-----PVNSREEFLQLFADLEGK 218 (282)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~l~~i~~~ 218 (282)
|+.+..+.......+..... ......-++ .++......-.......+++... . ......+....++++ +
T Consensus 341 F~~lrp~~l~w~~~v~~yl~-g~~~~~fdl--l~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I--~ 415 (532)
T TIGR01838 341 FSLLRENDLIWNYYVDNYLK-GKSPVPFDL--LFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKV--K 415 (532)
T ss_pred HHhcChhhHHHHHHHHHHhc-CCCccchhH--HHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhC--C
Confidence 22221111122222221111 111111000 01110000001111122221110 0 001111234567777 9
Q ss_pred ccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc-ccCCCCChH
Q 023416 219 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPA 264 (282)
Q Consensus 219 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p~ 264 (282)
+|+++|+|++|.++|.+.++.+.+.+++.+..+++++ |.+++++|.
T Consensus 416 vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 416 VPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 9999999999999999999999888888888999998 999998875
No 55
>PRK13604 luxD acyl transferase; Provisional
Probab=99.82 E-value=8.4e-19 Score=133.62 Aligned_cols=200 Identities=11% Similarity=0.148 Sum_probs=118.5
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCC-CCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
.||+.. ....+.++++.|+++ ||.|+.+|.||| |+|+..-...++.....|+.++++.+... . ..++.|+
T Consensus 43 ~HGf~~--~~~~~~~~A~~La~~----G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-~--~~~I~Li 113 (307)
T PRK13604 43 ASGFAR--RMDHFAGLAEYLSSN----GFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-G--INNLGLI 113 (307)
T ss_pred eCCCCC--ChHHHHHHHHHHHHC----CCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc-C--CCceEEE
Confidence 355554 234588999999998 999999999998 99976544455555677876666655421 1 5679999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
||||||.+|+..|... .++.+|+.+|... ++. .++. .+...+.
T Consensus 114 G~SmGgava~~~A~~~--~v~~lI~~sp~~~--l~d-------------~l~~--------------------~~~~~~~ 156 (307)
T PRK13604 114 AASLSARIAYEVINEI--DLSFLITAVGVVN--LRD-------------TLER--------------------ALGYDYL 156 (307)
T ss_pred EECHHHHHHHHHhcCC--CCCEEEEcCCccc--HHH-------------HHHH--------------------hhhcccc
Confidence 9999999997777643 3788999888531 000 0000 0000000
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCC-CHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN-SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEA 239 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~ 239 (282)
. + +....+... + ..+.......++........ ......+..+++ ++|+|+|||++|.++|.+.++.
T Consensus 157 ~--~-p~~~lp~~~-d-------~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l--~~PvLiIHG~~D~lVp~~~s~~ 223 (307)
T PRK13604 157 S--L-PIDELPEDL-D-------FEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGL--DIPFIAFTANNDSWVKQSEVID 223 (307)
T ss_pred c--C-ccccccccc-c-------cccccccHHHHHHHHHhcCccccccHHHHHhhc--CCCEEEEEcCCCCccCHHHHHH
Confidence 0 0 000000000 0 00000000011111000000 011134556667 8999999999999999999988
Q ss_pred HHhcc--CCceEEEeCCc-ccCCC
Q 023416 240 LKGAK--GVTKFVEVPGA-LLPQE 260 (282)
Q Consensus 240 ~~~~~--~~~~~~~~~~~-H~~~~ 260 (282)
+.+.. .+.++++++|+ |.+..
T Consensus 224 l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 224 LLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHHhccCCcEEEEeCCCccccCc
Confidence 87755 47889999999 98654
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.79 E-value=9.2e-18 Score=122.11 Aligned_cols=181 Identities=9% Similarity=0.054 Sum_probs=116.7
Q ss_pred CCCcccCcccccchHH--HHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~--~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
+||||.+ +...|+. +.+.+++.+ .+|+|+++|+|||| +++++++.+++++++ ..+++
T Consensus 6 llHGf~s--s~~~~~~~~~~~~l~~~~--~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~------~~~~~ 64 (190)
T PRK11071 6 YLHGFNS--SPRSAKATLLKNWLAQHH--PDIEMIVPQLPPYP-----------ADAAELLESLVLEHG------GDPLG 64 (190)
T ss_pred EECCCCC--CcchHHHHHHHHHHHHhC--CCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcC------CCCeE
Confidence 4788874 5556763 456666521 14999999999985 468889999999887 67899
Q ss_pred EEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHH
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 158 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (282)
++||||||.+++.++.++|. ++|+++|... + ...+..... . .
T Consensus 65 lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~-~--------------~~~~~~~~~-------------~-~------ 106 (190)
T PRK11071 65 LVGSSLGGYYATWLSQCFML---PAVVVNPAVR-P--------------FELLTDYLG-------------E-N------ 106 (190)
T ss_pred EEEECHHHHHHHHHHHHcCC---CEEEECCCCC-H--------------HHHHHHhcC-------------C-c------
Confidence 99999999999999999883 5688887421 0 000000000 0 0
Q ss_pred HhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHH
Q 023416 159 YKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEME 238 (282)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~ 238 (282)
..........++...++... .. . +.. +. . .+|+++++|++|.++|.+.+.
T Consensus 107 -~~~~~~~~~~~~~~~~~d~~-----------------~~-~-------~~~-i~-~--~~~v~iihg~~De~V~~~~a~ 156 (190)
T PRK11071 107 -ENPYTGQQYVLESRHIYDLK-----------------VM-Q-------IDP-LE-S--PDLIWLLQQTGDEVLDYRQAV 156 (190)
T ss_pred -ccccCCCcEEEcHHHHHHHH-----------------hc-C-------Ccc-CC-C--hhhEEEEEeCCCCcCCHHHHH
Confidence 00000000011111111110 00 0 011 11 3 788999999999999999999
Q ss_pred HHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 239 ALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
++.+. ++.++++|| |.. +..+++.+.|.+|+.
T Consensus 157 ~~~~~---~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 157 AYYAA---CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred HHHHh---cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 88874 467788999 987 445889999999974
No 57
>PLN02872 triacylglycerol lipase
Probab=99.78 E-value=1.5e-18 Score=139.15 Aligned_cols=265 Identities=9% Similarity=0.022 Sum_probs=137.4
Q ss_pred CCCcccCcccccch------HHHHHHHHHhhcCCCeEEEEecCCCCCCCCC-------CC--CCCchHHHH-HHHHHHhh
Q 023416 1 MIPTISDVSTVEEW------RLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-------PK--MDYNADVME-KFVVDLIN 64 (282)
Q Consensus 1 ~~p~~~~~ss~~~w------~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~-------~~--~~~~~~~~~-~~l~~~i~ 64 (282)
|+||+.. ++..| +.++..|++. ||+|+++|+||+|.|.. +. ..+++++++ .|+.++++
T Consensus 79 l~HGl~~--ss~~w~~~~~~~sla~~La~~----GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 79 LQHGLFM--AGDAWFLNSPEQSLGFILADH----GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred EeCcccc--cccceeecCcccchHHHHHhC----CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 4677753 33444 2455678887 89999999999886632 11 257888888 79999998
Q ss_pred CCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCC---cccceeeecCCCCCCCCccccCCCchhhhhh-hhhhh---hcC
Q 023416 65 APDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTWAGPLPIVFGRDSSMETRYG-LLRGT---LRA 137 (282)
Q Consensus 65 ~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~---~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~ 137 (282)
.+... . +.+++++|||+||.+++.+. .+|+ +|+.+++++|.... ..... +....... .+..+ +..
T Consensus 153 ~i~~~-~--~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~--~~~~~--~~~~~~~~~~~~~~~~~~g~ 224 (395)
T PLN02872 153 YVYSI-T--NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL--DHVTA--PLVLRMVFMHLDQMVVAMGI 224 (395)
T ss_pred HHHhc-c--CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh--ccCCC--HHHHHHHHHhHHHHHHHhcC
Confidence 76311 0 57899999999999998655 4565 58888888885321 00000 00000000 00000 000
Q ss_pred cc---hhhhHH---hhhhhcHHHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcch---HHHhhc--cCCCCCCHH
Q 023416 138 PG---VGWMMY---NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVP---AAFLTG--LLDPVNSRE 206 (282)
Q Consensus 138 ~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~ 206 (282)
.. ....+. ..+-... .................+...+..+....-.....+.+ .+..+. +...+.-..
T Consensus 225 ~~~~~~~~~~~~~~~~~C~~~-~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~ 303 (395)
T PLN02872 225 HQLNFRSDVLVKLLDSICEGH-MDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIF 303 (395)
T ss_pred ceecCCcHHHHHHHHHHccCc-hhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCch
Confidence 00 000000 0000000 00000000000000112222222211110000000000 000000 000000000
Q ss_pred HHHH----------HhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCC-ceEEEeCCc-cc---CCCCChHHHHHHHH
Q 023416 207 EFLQ----------LFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGA-LL---PQEEYPAMVAQELY 271 (282)
Q Consensus 207 ~~~~----------~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~-H~---~~~e~p~~~~~~i~ 271 (282)
.-.. .+++++.++|+++++|++|..++++..+.+.+..++ .+++.++++ |. ...|.|+++.+.|.
T Consensus 304 ~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il 383 (395)
T PLN02872 304 KNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMI 383 (395)
T ss_pred hhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHH
Confidence 0001 123342258999999999999999888888877666 678889998 95 56789999999999
Q ss_pred HHHHhhcCC
Q 023416 272 QFLQQTFEP 280 (282)
Q Consensus 272 ~fl~~~~~~ 280 (282)
+|+++....
T Consensus 384 ~fL~~~~~~ 392 (395)
T PLN02872 384 QFFRSLGKS 392 (395)
T ss_pred HHHHHhhhc
Confidence 999876544
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.77 E-value=3.5e-17 Score=126.33 Aligned_cols=245 Identities=19% Similarity=0.256 Sum_probs=134.8
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEc
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFG 81 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G 81 (282)
+||+. ++...|......+..... .|+|+++|+||||.|. .. .++...+++++..++++++ ..+++++|
T Consensus 27 ~hg~~--~~~~~~~~~~~~~~~~~~--~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~~------~~~~~l~G 94 (282)
T COG0596 27 LHGFP--GSSSVWRPVFKVLPALAA--RYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDALG------LEKVVLVG 94 (282)
T ss_pred eCCCC--CchhhhHHHHHHhhcccc--ceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHhC------CCceEEEE
Confidence 56665 345566664444544310 1899999999999997 22 3455666999999999988 45699999
Q ss_pred ccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCC-chhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHH-H
Q 023416 82 GGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDS-SMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ-Y 159 (282)
Q Consensus 82 ~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 159 (282)
||+||.++..++.++|+++++++++++... +......... ................. ... ........ .
T Consensus 95 ~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~ 165 (282)
T COG0596 95 HSMGGAVALALALRHPDRVRGLVLIGPAPP-PGLLEAALRQPAGAAPLAALADLLLGLD----AAA----FAALLAALGL 165 (282)
T ss_pred ecccHHHHHHHHHhcchhhheeeEecCCCC-cccccCccccCccccchhhhhhhhhccc----hhh----hhhhhhcccc
Confidence 999999999999999999999999987532 1110000000 00000000000000000 000 00000000 0
Q ss_pred hhcccc-----CCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCH
Q 023416 160 KSHVYS-----NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 234 (282)
Q Consensus 160 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~ 234 (282)
...... ...................... ............ . .....+.++ ++|+++++|++|.+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~-~~~~~~~~~--~~P~l~i~g~~d~~~~~ 237 (282)
T COG0596 166 LAALAAAARAGLAEALRAPLLGAAAAAFARAAR-ADLAAALLALLD----R-DLRAALARI--TVPTLIIHGEDDPVVPA 237 (282)
T ss_pred cccccccchhccccccccccchhHhhhhhhhcc-cccchhhhcccc----c-ccchhhccC--CCCeEEEecCCCCcCCH
Confidence 000000 0000000000000000000000 000000000000 0 133445566 89999999999977776
Q ss_pred HHHHHHHhccCC-ceEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 235 AEMEALKGAKGV-TKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
.....+.+..++ .++++++++ |+++.++|+.+++.+.+|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 238 ELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 666667777775 889999998 99999999999999998554
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.77 E-value=1.5e-17 Score=149.39 Aligned_cols=261 Identities=11% Similarity=0.097 Sum_probs=146.1
Q ss_pred CCCcccCcccccchHHH-----HHHHHHhhcCCCeEEEEecCCCCCCCCCCCC--CCchHHHHHHHHHHhhC---CCCCC
Q 023416 1 MIPTISDVSTVEEWRLV-----AQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--DYNADVMEKFVVDLINA---PDSPV 70 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~-----~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~i~~---l~~~~ 70 (282)
|+|||. .+++.|+.+ ++.|.+. ||+|+++| +|.|+.+.. .+++.+++..+.+.++. +.
T Consensus 72 lvhg~~--~~~~~~d~~~~~s~v~~L~~~----g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~--- 139 (994)
T PRK07868 72 MVHPMM--MSADMWDVTRDDGAVGILHRA----GLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVT--- 139 (994)
T ss_pred EECCCC--CCccceecCCcccHHHHHHHC----CCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhh---
Confidence 578886 466888865 8899888 89999999 577776532 35777777666666654 33
Q ss_pred cCCCCceEEEcccHHHHHHHHHHHhC-CCcccceeeecCCCCCCCCccccCC-----Cchhhhh-hhhhhhhcCcc-hhh
Q 023416 71 SSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAGPLPIVFGRD-----SSMETRY-GLLRGTLRAPG-VGW 142 (282)
Q Consensus 71 ~~~~~~~~l~G~s~G~~~a~~~~~~~-~~~v~~lvl~~p~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~-~~~ 142 (282)
+.+++++||||||.+++.++..+ +.+|+++|+++++....-....... ....... ..... ...|. ...
T Consensus 140 ---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~ 215 (994)
T PRK07868 140 ---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNR-LDIPGWMAR 215 (994)
T ss_pred ---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhc-CCCCHHHHH
Confidence 56899999999999999998744 5689999998775321100000000 0000000 00111 11111 111
Q ss_pred hHHhhhhhc--HHHHHHHHhhccccCCCCCChHHHHHHHHHHhh-cCCCcchHHHhhccCCC--C----CCHHHHHHHhh
Q 023416 143 MMYNMLVSN--EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKR-KGARYVPAAFLTGLLDP--V----NSREEFLQLFA 213 (282)
Q Consensus 143 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~----~~~~~~~~~l~ 213 (282)
..+..+... ......++. ....+....+++....+...... .........++..+... . .........++
T Consensus 216 ~~~~~l~p~~~~~~~~~~~~-~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~ 294 (994)
T PRK07868 216 TGFQMLDPVKTAKARVDFLR-QLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLA 294 (994)
T ss_pred HHHHhcChhHHHHHHHHHHH-hcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchh
Confidence 112211000 001111111 11111112233333332222200 00011122222211100 0 00000112467
Q ss_pred cccCCccEEEEecCCCCCCCHHHHHHHHhccCCceE-EEeCCc-ccCCC---CChHHHHHHHHHHHHhhcCC
Q 023416 214 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKF-VEVPGA-LLPQE---EYPAMVAQELYQFLQQTFEP 280 (282)
Q Consensus 214 ~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~-H~~~~---e~p~~~~~~i~~fl~~~~~~ 280 (282)
++ ++|+|+|+|++|.+++++..+.+.+..++.++ .+++++ |+.++ ..|+++...|.+||.++++.
T Consensus 295 ~i--~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 295 DI--TCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred hC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 77 99999999999999999999999998999987 577887 99654 46889999999999987654
No 60
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.75 E-value=2.7e-18 Score=125.36 Aligned_cols=95 Identities=15% Similarity=0.245 Sum_probs=75.9
Q ss_pred cccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC-CCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHH
Q 023416 8 VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 86 (282)
Q Consensus 8 ~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~ 86 (282)
.+|.-.|..++..|.... ..+|+|+|+||||+|... ..+.+.+.++.|+.++++.+-.+. ..+++|+||||||
T Consensus 84 G~S~LSfA~~a~el~s~~---~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~---~~~iilVGHSmGG 157 (343)
T KOG2564|consen 84 GSSALSFAIFASELKSKI---RCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGEL---PPQIILVGHSMGG 157 (343)
T ss_pred cccchhHHHHHHHHHhhc---ceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccC---CCceEEEeccccc
Confidence 367788999999998873 488999999999999764 367999999999999999875321 4679999999999
Q ss_pred HHHHHHHHh-CCCcccceeeecC
Q 023416 87 TLTVRAAKK-NLVKPTAIAAVAP 108 (282)
Q Consensus 87 ~~a~~~~~~-~~~~v~~lvl~~p 108 (282)
.+|...+.. -...+.+++.++-
T Consensus 158 aIav~~a~~k~lpsl~Gl~viDV 180 (343)
T KOG2564|consen 158 AIAVHTAASKTLPSLAGLVVIDV 180 (343)
T ss_pred hhhhhhhhhhhchhhhceEEEEE
Confidence 999887753 2223778888764
No 61
>PRK10566 esterase; Provisional
Probab=99.74 E-value=3.7e-16 Score=119.69 Aligned_cols=203 Identities=13% Similarity=0.065 Sum_probs=112.8
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchH-------HHHHHHHHHhhCCCCCCcCC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNAD-------VMEKFVVDLINAPDSPVSSS 73 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~-------~~~~~l~~~i~~l~~~~~~~ 73 (282)
++||+. ++...|..++..|++. ||+|+++|+||||.|.......++. .-.+++.++++.+......-
T Consensus 32 ~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (249)
T PRK10566 32 FYHGFT--SSKLVYSYFAVALAQA----GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLL 105 (249)
T ss_pred EeCCCC--cccchHHHHHHHHHhC----CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 356764 3456788899999988 8999999999999864321111211 12333433343322110001
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHH
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 153 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
..+++++|||+||.+++.++.++|.....++++.+.. .. .+...
T Consensus 106 ~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~------------------------~~------~~~~~------ 149 (249)
T PRK10566 106 DDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY------------------------FT------SLART------ 149 (249)
T ss_pred ccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH------------------------HH------HHHHH------
Confidence 4689999999999999999988776433334433210 00 00000
Q ss_pred HHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCC
Q 023416 154 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 233 (282)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~ 233 (282)
.+....... ............. .... + ....+.++. ++|+|+++|++|..++
T Consensus 150 ----~~~~~~~~~--~~~~~~~~~~~~~-------------~~~~-~-------~~~~~~~i~-~~P~Lii~G~~D~~v~ 201 (249)
T PRK10566 150 ----LFPPLIPET--AAQQAEFNNIVAP-------------LAEW-E-------VTHQLEQLA-DRPLLLWHGLADDVVP 201 (249)
T ss_pred ----hcccccccc--cccHHHHHHHHHH-------------Hhhc-C-------hhhhhhhcC-CCCEEEEEcCCCCcCC
Confidence 000000000 0000000000000 0000 0 112233321 5899999999999999
Q ss_pred HHHHHHHHhccC------CceEEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 234 KAEMEALKGAKG------VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 234 ~~~~~~~~~~~~------~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
.+..+.+.+.++ +++++.++++ |... + ...+.+.+||++.
T Consensus 202 ~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 202 AAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 998888776442 3567789998 9863 3 4678888998763
No 62
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.73 E-value=3.9e-16 Score=115.24 Aligned_cols=92 Identities=13% Similarity=0.317 Sum_probs=83.2
Q ss_pred cccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHH
Q 023416 8 VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 86 (282)
Q Consensus 8 ~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~ 86 (282)
-.|..+|+.+.+.|.+. |.|+|.+.+||+|.++.+. ..|+-.+-...+.++++.+++ ..+++.+|||.|+
T Consensus 45 PGSH~DFkYi~~~l~~~----~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i-----~~~~i~~gHSrGc 115 (297)
T PF06342_consen 45 PGSHNDFKYIRPPLDEA----GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGI-----KGKLIFLGHSRGC 115 (297)
T ss_pred CCCccchhhhhhHHHHc----CeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCC-----CCceEEEEeccch
Confidence 35788999999999998 9999999999999998854 789999999999999999996 6789999999999
Q ss_pred HHHHHHHHhCCCcccceeeecCCC
Q 023416 87 TLTVRAAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 87 ~~a~~~~~~~~~~v~~lvl~~p~~ 110 (282)
..|+..+..+| +.++++++|++
T Consensus 116 enal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCc
Confidence 99999999886 45999999964
No 63
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.70 E-value=1.1e-15 Score=110.64 Aligned_cols=211 Identities=15% Similarity=0.124 Sum_probs=130.9
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhC-CCCCCcCCCCceEEEcccHHHHH
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA-PDSPVSSSESDLVIFGGGHAATL 88 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~-l~~~~~~~~~~~~l~G~s~G~~~ 88 (282)
++..|+.....|... ..++++.+||+|.--....-.+++.+++.+.+-+.. .. ..++.++||||||++
T Consensus 19 sa~~fr~W~~~lp~~-----iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~------d~P~alfGHSmGa~l 87 (244)
T COG3208 19 SASLFRSWSRRLPAD-----IELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLL------DAPFALFGHSMGAML 87 (244)
T ss_pred CHHHHHHHHhhCCch-----hheeeecCCCcccccCCcccccHHHHHHHHHHHhccccC------CCCeeecccchhHHH
Confidence 344455555577776 999999999999765544667899999999888873 43 789999999999999
Q ss_pred HHHHHHh---CCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhcccc
Q 023416 89 TVRAAKK---NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYS 165 (282)
Q Consensus 89 a~~~~~~---~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
|...|.+ .-..+..+.+.+... | .... . ..+... .....++........
T Consensus 88 AfEvArrl~~~g~~p~~lfisg~~a--P--~~~~---~------------------~~i~~~--~D~~~l~~l~~lgG~- 139 (244)
T COG3208 88 AFEVARRLERAGLPPRALFISGCRA--P--HYDR---G------------------KQIHHL--DDADFLADLVDLGGT- 139 (244)
T ss_pred HHHHHHHHHHcCCCcceEEEecCCC--C--CCcc---c------------------CCccCC--CHHHHHHHHHHhCCC-
Confidence 9999874 122244555554321 1 0000 0 000110 122233332221111
Q ss_pred CCCCC-ChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhcc
Q 023416 166 NPDNV-TPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK 244 (282)
Q Consensus 166 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~ 244 (282)
++..+ ++|+++... +..+.+.. ....+.-. . -..+ +||+.++.|++|..++.+....+++..
T Consensus 140 p~e~led~El~~l~L-PilRAD~~-----~~e~Y~~~--------~-~~pl--~~pi~~~~G~~D~~vs~~~~~~W~~~t 202 (244)
T COG3208 140 PPELLEDPELMALFL-PILRADFR-----ALESYRYP--------P-PAPL--ACPIHAFGGEKDHEVSRDELGAWREHT 202 (244)
T ss_pred ChHHhcCHHHHHHHH-HHHHHHHH-----HhcccccC--------C-CCCc--CcceEEeccCcchhccHHHHHHHHHhh
Confidence 11222 233333222 22221110 01011000 0 0233 899999999999999999999888765
Q ss_pred C-CceEEEeCCcccCCCCChHHHHHHHHHHHHh
Q 023416 245 G-VTKFVEVPGALLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 245 ~-~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~~ 276 (282)
. ..++.+++|+|+...++.+++...|.+.+..
T Consensus 203 ~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 203 KGDFTLRVFDGGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred cCCceEEEecCcceehhhhHHHHHHHHHHHhhh
Confidence 4 7889999999999999999999999998863
No 64
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.70 E-value=1.2e-16 Score=121.32 Aligned_cols=102 Identities=17% Similarity=0.124 Sum_probs=81.5
Q ss_pred CCCcccCc--ccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 1 MIPTISDV--STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 1 ~~p~~~~~--ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
|+||+... .+...|..+++.|++. ||+|+++|+||||.|+......+++.+++|+.++++.+... . ..+++
T Consensus 30 llHG~g~~~~~~~~~~~~la~~La~~----Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~--~~~v~ 102 (266)
T TIGR03101 30 YLPPFAEEMNKSRRMVALQARAFAAG----GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-G--HPPVT 102 (266)
T ss_pred EECCCcccccchhHHHHHHHHHHHHC----CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-C--CCCEE
Confidence 46777532 2345688889999987 89999999999999976544567888889887765544211 0 56899
Q ss_pred EEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
++||||||.+++.++.++|.+++++|+++|.
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 9999999999999999999999999999985
No 65
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.68 E-value=7.2e-15 Score=108.49 Aligned_cols=227 Identities=17% Similarity=0.154 Sum_probs=139.8
Q ss_pred HHHHHHHHhhcCCCeEEEEecCCCCCCCC--CCCC--CCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHH
Q 023416 16 LVAQDIVQRVGKVNWRATIVDWPGLGYSD--RPKM--DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVR 91 (282)
Q Consensus 16 ~~~~~L~~~~~~~g~~vi~~D~~G~G~S~--~~~~--~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~ 91 (282)
+-+..+.++ |.|+.+|.|||-.-. -|.. -.|+++++++|..++++++ -.+++-+|-..|+.+..+
T Consensus 70 p~m~ei~~~-----fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~------lk~vIg~GvGAGAyIL~r 138 (326)
T KOG2931|consen 70 PDMAEILEH-----FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFG------LKSVIGMGVGAGAYILAR 138 (326)
T ss_pred HhHHHHHhh-----eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcC------cceEEEecccccHHHHHH
Confidence 345667777 999999999985432 2332 3589999999999999998 678999999999999999
Q ss_pred HHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccC-CCCC
Q 023416 92 AAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSN-PDNV 170 (282)
Q Consensus 92 ~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 170 (282)
+|..+|++|.++|||++.... ..|+.++.. ......++..- .......++....|.. ...-
T Consensus 139 FAl~hp~rV~GLvLIn~~~~a---------------~gwiew~~~-K~~s~~l~~~G--mt~~~~d~ll~H~Fg~e~~~~ 200 (326)
T KOG2931|consen 139 FALNHPERVLGLVLINCDPCA---------------KGWIEWAYN-KVSSNLLYYYG--MTQGVKDYLLAHHFGKEELGN 200 (326)
T ss_pred HHhcChhheeEEEEEecCCCC---------------chHHHHHHH-HHHHHHHHhhc--hhhhHHHHHHHHHhccccccc
Confidence 999999999999999985321 111111111 00000111110 1122222222233322 1122
Q ss_pred ChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHH-HhhcccCCccEEEEecCCCCCCCHHHHHHHHhc--cCCc
Q 023416 171 TPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ-LFADLEGKLPLLVVSTEGSPRRSKAEMEALKGA--KGVT 247 (282)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~--~~~~ 247 (282)
..+.++.+.....+.-....+..++..+.... +.+.-+. ....+ +||+|++.|++.+.+.. ..++... ..+.
T Consensus 201 ~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~-DL~~~r~~~~~tl--kc~vllvvGd~Sp~~~~--vv~~n~~Ldp~~t 275 (326)
T KOG2931|consen 201 NSDIVQEYRQHLGERLNPKNLALFLNAYNGRR-DLSIERPKLGTTL--KCPVLLVVGDNSPHVSA--VVECNSKLDPTYT 275 (326)
T ss_pred cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCC-CccccCCCcCccc--cccEEEEecCCCchhhh--hhhhhcccCcccc
Confidence 45666666655544333233344443332211 1100011 11144 79999999999887663 2233322 2356
Q ss_pred eEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 248 KFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 248 ~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
.+..+.+| -.+.+++|.++++.+.-||..
T Consensus 276 tllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 276 TLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred eEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 78888998 889999999999999999875
No 66
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.65 E-value=4.8e-15 Score=111.87 Aligned_cols=242 Identities=11% Similarity=0.088 Sum_probs=129.3
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
+++|+-+.+.+..-+.++..+.++ ||.|++++.||||.+.... .-|+. -+.+|+..+++.+..... ..++..
T Consensus 80 l~HGL~G~s~s~y~r~L~~~~~~r----g~~~Vv~~~Rgcs~~~n~~p~~yh~-G~t~D~~~~l~~l~~~~~--~r~~~a 152 (345)
T COG0429 80 LFHGLEGSSNSPYARGLMRALSRR----GWLVVVFHFRGCSGEANTSPRLYHS-GETEDIRFFLDWLKARFP--PRPLYA 152 (345)
T ss_pred EEeccCCCCcCHHHHHHHHHHHhc----CCeEEEEecccccCCcccCcceecc-cchhHHHHHHHHHHHhCC--CCceEE
Confidence 357888777777667788899988 9999999999999987632 22222 223666666655532111 678999
Q ss_pred EcccHHH-HHHHHHHHhCC-CcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcch----hhhHHhhhhhcHH
Q 023416 80 FGGGHAA-TLTVRAAKKNL-VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV----GWMMYNMLVSNEK 153 (282)
Q Consensus 80 ~G~s~G~-~~a~~~~~~~~-~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 153 (282)
+|.|+|| +++....++.- ..+++.+.++.+.. .. .....+..... .+.+.+.+ ..
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D----l~------------~~~~~l~~~~s~~ly~r~l~~~L---~~ 213 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD----LE------------ACAYRLDSGFSLRLYSRYLLRNL---KR 213 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHH----HH------------HHHHHhcCchhhhhhHHHHHHHH---HH
Confidence 9999999 55555554321 12334444432211 00 00000111111 11111111 11
Q ss_pred HHHHHHhhccccCCCCCChH---HHHHHHHHHhhc----CCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEec
Q 023416 154 AIQSQYKSHVYSNPDNVTPG---IVESRYALTKRK----GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVST 226 (282)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G 226 (282)
.++..+.. +.+ ..+.. .++......... .....+......+.... -...+++| .+|+|||++
T Consensus 214 ~~~~kl~~--l~~--~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aS-----s~~~L~~I--r~PtLii~A 282 (345)
T COG0429 214 NAARKLKE--LEP--SLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQAS-----SLPLLPKI--RKPTLIINA 282 (345)
T ss_pred HHHHHHHh--cCc--ccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcc-----cccccccc--ccceEEEec
Confidence 11111111 111 11111 111111111000 00001111111111111 34567777 999999999
Q ss_pred CCCCCCCHHHHHHHHh-ccCCceEEEeCCc-ccCCCC----ChH-HHHHHHHHHHHhhcC
Q 023416 227 EGSPRRSKAEMEALKG-AKGVTKFVEVPGA-LLPQEE----YPA-MVAQELYQFLQQTFE 279 (282)
Q Consensus 227 ~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~-H~~~~e----~p~-~~~~~i~~fl~~~~~ 279 (282)
.+|++++.+....... ..|++.+.+-+-| |.-.+. +|. -..+.|.+|++...+
T Consensus 283 ~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 283 KDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred CCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999988877765 7888888888888 987666 444 556778888877543
No 67
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.63 E-value=9.9e-15 Score=114.18 Aligned_cols=101 Identities=14% Similarity=0.196 Sum_probs=75.5
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
++||+.+.|....-++++..+.++ ||+|+++..||+|.|.-.. .-|+ .-+.+|+.++++++..... ..+++.
T Consensus 130 ilpGltg~S~~~YVr~lv~~a~~~----G~r~VVfN~RG~~g~~LtTpr~f~-ag~t~Dl~~~v~~i~~~~P--~a~l~a 202 (409)
T KOG1838|consen 130 ILPGLTGGSHESYVRHLVHEAQRK----GYRVVVFNHRGLGGSKLTTPRLFT-AGWTEDLREVVNHIKKRYP--QAPLFA 202 (409)
T ss_pred EecCCCCCChhHHHHHHHHHHHhC----CcEEEEECCCCCCCCccCCCceee-cCCHHHHHHHHHHHHHhCC--CCceEE
Confidence 589999887776667788888887 9999999999999998643 3333 3456777777777664443 778999
Q ss_pred EcccHHHHHHHHHHHhC---CCcccceeeecC
Q 023416 80 FGGGHAATLTVRAAKKN---LVKPTAIAAVAP 108 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~---~~~v~~lvl~~p 108 (282)
+|.||||.+...|..+. ...+.++++++|
T Consensus 203 vG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P 234 (409)
T KOG1838|consen 203 VGFSMGGNILTNYLGEEGDNTPLIAAVAVCNP 234 (409)
T ss_pred EEecchHHHHHHHhhhccCCCCceeEEEEecc
Confidence 99999999999998742 233455555555
No 68
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.63 E-value=1.2e-14 Score=102.45 Aligned_cols=195 Identities=13% Similarity=0.078 Sum_probs=121.2
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCC-ceEEE
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES-DLVIF 80 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~-~~~l~ 80 (282)
.+|+-+.-+......++..|.+. |+.++.+|++|-|+|+..-..-.....++|+..+++++... .. --+++
T Consensus 39 cHGfrS~Kn~~~~~~vA~~~e~~----gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~----nr~v~vi~ 110 (269)
T KOG4667|consen 39 CHGFRSHKNAIIMKNVAKALEKE----GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS----NRVVPVIL 110 (269)
T ss_pred eeccccccchHHHHHHHHHHHhc----CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC----ceEEEEEE
Confidence 45665555555556678888887 99999999999999987432223344569999999988731 11 13469
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
|||-||.+++.++.++.. +.-+|-++.-.. . +.... ..+ .+..+.+...
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd--l-----------------~~~I~---------eRl--g~~~l~~ike 159 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYD--L-----------------KNGIN---------ERL--GEDYLERIKE 159 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcccccc--h-----------------hcchh---------hhh--cccHHHHHHh
Confidence 999999999999998777 445555543110 0 00000 000 1111222111
Q ss_pred hccccC-------CCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCC
Q 023416 161 SHVYSN-------PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 233 (282)
Q Consensus 161 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~ 233 (282)
+.+... +..++++.+.+.. .. ++-+.-.+|+++||+|-++|..|.++|
T Consensus 160 ~Gfid~~~rkG~y~~rvt~eSlmdrL--------------------nt-----d~h~aclkId~~C~VLTvhGs~D~IVP 214 (269)
T KOG4667|consen 160 QGFIDVGPRKGKYGYRVTEESLMDRL--------------------NT-----DIHEACLKIDKQCRVLTVHGSEDEIVP 214 (269)
T ss_pred CCceecCcccCCcCceecHHHHHHHH--------------------hc-----hhhhhhcCcCccCceEEEeccCCceee
Confidence 111110 0112222111111 00 022333345558999999999999999
Q ss_pred HHHHHHHHhccCCceEEEeCCc-ccCCC
Q 023416 234 KAEMEALKGAKGVTKFVEVPGA-LLPQE 260 (282)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-H~~~~ 260 (282)
.+.++++++.+++-++.++||+ |..-.
T Consensus 215 ve~AkefAk~i~nH~L~iIEgADHnyt~ 242 (269)
T KOG4667|consen 215 VEDAKEFAKIIPNHKLEIIEGADHNYTG 242 (269)
T ss_pred chhHHHHHHhccCCceEEecCCCcCccc
Confidence 9999999999999999999999 98443
No 69
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.62 E-value=1.3e-15 Score=113.88 Aligned_cols=226 Identities=21% Similarity=0.204 Sum_probs=124.1
Q ss_pred HHHHHHHHhhcCCCeEEEEecCCCCCCCCC--CC--CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHH
Q 023416 16 LVAQDIVQRVGKVNWRATIVDWPGLGYSDR--PK--MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVR 91 (282)
Q Consensus 16 ~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~--~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~ 91 (282)
+-...+.++ |.|+-+|.||+..-.. |. .-.|++++++++.+++++++ -.+++.+|-..|+.+..+
T Consensus 47 ~~m~~i~~~-----f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~------lk~vIg~GvGAGAnIL~r 115 (283)
T PF03096_consen 47 EDMQEILQN-----FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFG------LKSVIGFGVGAGANILAR 115 (283)
T ss_dssp HHHHHHHTT-----SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHH
T ss_pred hhHHHHhhc-----eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCC------ccEEEEEeeccchhhhhh
Confidence 445677777 9999999999975432 33 24589999999999999999 678999999999999999
Q ss_pred HHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhh-hhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCCCCC
Q 023416 92 AAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLR-GTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNV 170 (282)
Q Consensus 92 ~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (282)
+|.++|++|.++||++|.... ..+.++....+. +.+..-.+...... -.+.+.+.+.... .
T Consensus 116 fAl~~p~~V~GLiLvn~~~~~--------~gw~Ew~~~K~~~~~L~~~gmt~~~~d------~Ll~h~Fg~~~~~----~ 177 (283)
T PF03096_consen 116 FALKHPERVLGLILVNPTCTA--------AGWMEWFYQKLSSWLLYSYGMTSSVKD------YLLWHYFGKEEEE----N 177 (283)
T ss_dssp HHHHSGGGEEEEEEES---S-----------HHHHHHHHHH-------CTTS-HHH------HHHHHHS-HHHHH----C
T ss_pred ccccCccceeEEEEEecCCCC--------ccHHHHHHHHHhcccccccccccchHH------hhhhccccccccc----c
Confidence 999999999999999986321 111111111110 01110011011111 0111111111110 1
Q ss_pred ChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhcc-CCceE
Q 023416 171 TPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-GVTKF 249 (282)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~ 249 (282)
..+.++.+.......-....+..++..+. .+.++....+.. .||+|++.|+..+.... ..+-..+.. ...++
T Consensus 178 n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~----~R~DL~~~~~~~--~c~vLlvvG~~Sp~~~~-vv~~ns~Ldp~~ttl 250 (283)
T PF03096_consen 178 NSDLVQTYRQHLDERINPKNLALFLNSYN----SRTDLSIERPSL--GCPVLLVVGDNSPHVDD-VVEMNSKLDPTKTTL 250 (283)
T ss_dssp T-HHHHHHHHHHHT-TTHHHHHHHHHHHH----T-----SECTTC--CS-EEEEEETTSTTHHH-HHHHHHHS-CCCEEE
T ss_pred cHHHHHHHHHHHhcCCCHHHHHHHHHHHh----ccccchhhcCCC--CCCeEEEEecCCcchhh-HHHHHhhcCcccceE
Confidence 33455555444433222233334443332 222344445556 89999999999886653 233223333 35678
Q ss_pred EEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 250 VEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 250 ~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
..+++| =.+..|+|+++++.+.-||...
T Consensus 251 lkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 251 LKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp EEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred EEecccCCcccccCcHHHHHHHHHHHccC
Confidence 999999 9999999999999999999754
No 70
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.61 E-value=1.2e-14 Score=101.87 Aligned_cols=140 Identities=17% Similarity=0.347 Sum_probs=102.4
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
++||+.. +...|..+++.|++. ||.|+.+|+||+|.+... ...+.+.+++.. .... ..+++++
T Consensus 4 ~~HG~~~--~~~~~~~~~~~l~~~----G~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~------~~~i~l~ 66 (145)
T PF12695_consen 4 LLHGWGG--SRRDYQPLAEALAEQ----GYAVVAFDYPGHGDSDGA---DAVERVLADIRA--GYPD------PDRIILI 66 (145)
T ss_dssp EECTTTT--TTHHHHHHHHHHHHT----TEEEEEESCTTSTTSHHS---HHHHHHHHHHHH--HHCT------CCEEEEE
T ss_pred EECCCCC--CHHHHHHHHHHHHHC----CCEEEEEecCCCCccchh---HHHHHHHHHHHh--hcCC------CCcEEEE
Confidence 4677764 466799999999998 999999999999987322 122233333220 1112 6789999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
|||+||.++..++.+. .+++++|+++|.. .
T Consensus 67 G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~----------------------------------------~--------- 96 (145)
T PF12695_consen 67 GHSMGGAIAANLAARN-PRVKAVVLLSPYP----------------------------------------D--------- 96 (145)
T ss_dssp EETHHHHHHHHHHHHS-TTESEEEEESESS----------------------------------------G---------
T ss_pred EEccCcHHHHHHhhhc-cceeEEEEecCcc----------------------------------------c---------
Confidence 9999999999999987 7789999986510 0
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 240 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~ 240 (282)
.+.+... ++|+++++|++|..++.+..+.+
T Consensus 97 ------------------------------------------------~~~~~~~--~~pv~~i~g~~D~~~~~~~~~~~ 126 (145)
T PF12695_consen 97 ------------------------------------------------SEDLAKI--RIPVLFIHGENDPLVPPEQVRRL 126 (145)
T ss_dssp ------------------------------------------------CHHHTTT--TSEEEEEEETT-SSSHHHHHHHH
T ss_pred ------------------------------------------------hhhhhcc--CCcEEEEEECCCCcCCHHHHHHH
Confidence 0111122 66999999999999999888887
Q ss_pred HhccC-CceEEEeCCc-cc
Q 023416 241 KGAKG-VTKFVEVPGA-LL 257 (282)
Q Consensus 241 ~~~~~-~~~~~~~~~~-H~ 257 (282)
.+..+ ..++++++++ |+
T Consensus 127 ~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 127 YEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHCSSEEEEEETTS-TT
T ss_pred HHHcCCCcEEEEeCCCcCc
Confidence 76554 6889999999 95
No 71
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.61 E-value=1.1e-14 Score=106.31 Aligned_cols=176 Identities=15% Similarity=0.172 Sum_probs=114.5
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
..+...|+.+ -+++|+.+|++|+|.|...+... ...+|++++.+.+..... ...+++|+|+|+|...++.+|.
T Consensus 77 ~~~~~~l~~~---ln~nv~~~DYSGyG~S~G~psE~---n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Las 149 (258)
T KOG1552|consen 77 VELFKELSIF---LNCNVVSYDYSGYGRSSGKPSER---NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLAS 149 (258)
T ss_pred HHHHHHHhhc---ccceEEEEecccccccCCCcccc---cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhh
Confidence 3445556653 24999999999999998744333 344455555544433221 1588999999999999999999
Q ss_pred hCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCCCCCChHH
Q 023416 95 KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGI 174 (282)
Q Consensus 95 ~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (282)
+.| +.++||.+|...+ ++ .++. . .....+.+
T Consensus 150 r~~--~~alVL~SPf~S~----------------------~r------v~~~----~-------~~~~~~~d-------- 180 (258)
T KOG1552|consen 150 RYP--LAAVVLHSPFTSG----------------------MR------VAFP----D-------TKTTYCFD-------- 180 (258)
T ss_pred cCC--cceEEEeccchhh----------------------hh------hhcc----C-------cceEEeec--------
Confidence 988 8899999984210 00 0000 0 00000000
Q ss_pred HHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCC-ceEEEeC
Q 023416 175 VESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVP 253 (282)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~ 253 (282)
.+. ..+.++.+ +||+|+++|++|.+++....+++-+..++ .+...+.
T Consensus 181 ------------------~f~------------~i~kI~~i--~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~ 228 (258)
T KOG1552|consen 181 ------------------AFP------------NIEKISKI--TCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVK 228 (258)
T ss_pred ------------------ccc------------ccCcceec--cCCEEEEecccCceecccccHHHHHhccccCCCcEEe
Confidence 000 02334455 99999999999999999999988776554 3667888
Q ss_pred Cc-ccCCCCChHHHHHHHHHHHHhhcC
Q 023416 254 GA-LLPQEEYPAMVAQELYQFLQQTFE 279 (282)
Q Consensus 254 ~~-H~~~~e~p~~~~~~i~~fl~~~~~ 279 (282)
|+ |.-. +...++...+..|+.....
T Consensus 229 g~gH~~~-~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 229 GAGHNDI-ELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred cCCCccc-ccCHHHHHHHHHHHHHhcc
Confidence 88 8744 4455677788888776543
No 72
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=8e-13 Score=101.67 Aligned_cols=231 Identities=16% Similarity=0.079 Sum_probs=141.9
Q ss_pred CeEEEEecCCCCC-CCCCCC-------------CCCchHHHHHHHHHHhhCCCCCCcCCCCceE-EEcccHHHHHHHHHH
Q 023416 29 NWRATIVDWPGLG-YSDRPK-------------MDYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAATLTVRAA 93 (282)
Q Consensus 29 g~~vi~~D~~G~G-~S~~~~-------------~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~-l~G~s~G~~~a~~~~ 93 (282)
.|.||+.|..|.+ .|..|. ..+|+.|++..-..++++|++ .++. ++|+||||+.|+..+
T Consensus 92 r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI------~~l~avvGgSmGGMqaleWa 165 (368)
T COG2021 92 RFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGI------KKLAAVVGGSMGGMQALEWA 165 (368)
T ss_pred ceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCc------ceEeeeeccChHHHHHHHHH
Confidence 4999999999976 444332 247889999988999999994 4444 799999999999999
Q ss_pred HhCCCcccceeeecCCCCCCCCccccCCCchhhhhh-hhhhhhcCcch-------------hhhHHhhh----hhcHHHH
Q 023416 94 KKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYG-LLRGTLRAPGV-------------GWMMYNML----VSNEKAI 155 (282)
Q Consensus 94 ~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~----~~~~~~~ 155 (282)
..+|++|.+++.++.+.. .-+.... ... ..+.+...|.+ +-.+.+++ .+.+..+
T Consensus 166 ~~yPd~V~~~i~ia~~~r-~s~~~ia-------~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~ 237 (368)
T COG2021 166 IRYPDRVRRAIPIATAAR-LSAQNIA-------FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEEL 237 (368)
T ss_pred HhChHHHhhhheeccccc-CCHHHHH-------HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHH
Confidence 999999999999987431 1111000 001 11111112211 11111111 1233344
Q ss_pred HHHHhhccccCCCCCC--hHHHHHHHHHHh----hc-CCCcchHHHhh--ccCCCCCCHHHHHHHhhcccCCccEEEEec
Q 023416 156 QSQYKSHVYSNPDNVT--PGIVESRYALTK----RK-GARYVPAAFLT--GLLDPVNSREEFLQLFADLEGKLPLLVVST 226 (282)
Q Consensus 156 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~i~~~~P~lii~G 226 (282)
.+.+.+....++.... ...++.|....- .. +... +..+.+ ...+......++.+.++++ ++|++++.=
T Consensus 238 ~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNs-YL~lt~ald~~D~s~~~~~l~~al~~i--~~~~lv~gi 314 (368)
T COG2021 238 DERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANS-YLYLTRALDYHDVSRGRGDLTAALARI--KAPVLVVGI 314 (368)
T ss_pred HHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcch-HHHHHHHHHhcCCCCCcCcHHHHHhcC--ccCEEEEEe
Confidence 3333321111111111 223333333221 11 1111 111111 2223333445688889999 999999999
Q ss_pred CCCCCCCHHHHHHHHhccCCce-EEEeCC--cccCCCCChHHHHHHHHHHHHh
Q 023416 227 EGSPRRSKAEMEALKGAKGVTK-FVEVPG--ALLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 227 ~~D~~~~~~~~~~~~~~~~~~~-~~~~~~--~H~~~~e~p~~~~~~i~~fl~~ 276 (282)
+.|...|++..+++.+.++... +.+++. ||--++...+.+...|..||..
T Consensus 315 ~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 315 TSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred cccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 9999999999999998877766 666665 3998888889999999999975
No 73
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.58 E-value=3.2e-14 Score=106.27 Aligned_cols=191 Identities=16% Similarity=0.157 Sum_probs=111.8
Q ss_pred hHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC-----C---CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHH
Q 023416 14 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-----K---MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHA 85 (282)
Q Consensus 14 w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~-----~---~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G 85 (282)
|......|+++ ||.|+.+|.||.+..... . ....++|..+.+..+++.-..+ ..++.++|+|+|
T Consensus 3 f~~~~~~la~~----Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD----~~ri~i~G~S~G 74 (213)
T PF00326_consen 3 FNWNAQLLASQ----GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYID----PDRIGIMGHSYG 74 (213)
T ss_dssp -SHHHHHHHTT----T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEE----EEEEEEEEETHH
T ss_pred eeHHHHHHHhC----CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccccc----ceeEEEEccccc
Confidence 44567788888 999999999998753211 1 1122333333334443333221 568999999999
Q ss_pred HHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHH-HHhhccc
Q 023416 86 ATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQS-QYKSHVY 164 (282)
Q Consensus 86 ~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 164 (282)
|.+++..+.++|+++++++..+|..... .. ... ... +.. ... .+
T Consensus 75 G~~a~~~~~~~~~~f~a~v~~~g~~d~~--~~----------------~~~-------------~~~--~~~~~~~--~~ 119 (213)
T PF00326_consen 75 GYLALLAATQHPDRFKAAVAGAGVSDLF--SY----------------YGT-------------TDI--YTKAEYL--EY 119 (213)
T ss_dssp HHHHHHHHHHTCCGSSEEEEESE-SSTT--CS----------------BHH-------------TCC--HHHGHHH--HH
T ss_pred ccccchhhcccceeeeeeeccceecchh--cc----------------ccc-------------ccc--ccccccc--cc
Confidence 9999999999999999999988743110 00 000 000 000 000 01
Q ss_pred cCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhc--ccCCccEEEEecCCCCCCCHHHHHHHH-
Q 023416 165 SNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD--LEGKLPLLVVSTEGSPRRSKAEMEALK- 241 (282)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~~~P~lii~G~~D~~~~~~~~~~~~- 241 (282)
..+.. ..+..... .. ...+.+ + ++|+|+++|++|..+|.+.+..+.
T Consensus 120 ~~~~~-~~~~~~~~-s~---------------------------~~~~~~~~~--~~P~li~hG~~D~~Vp~~~s~~~~~ 168 (213)
T PF00326_consen 120 GDPWD-NPEFYREL-SP---------------------------ISPADNVQI--KPPVLIIHGENDPRVPPSQSLRLYN 168 (213)
T ss_dssp SSTTT-SHHHHHHH-HH---------------------------GGGGGGCGG--GSEEEEEEETTBSSSTTHHHHHHHH
T ss_pred Cccch-hhhhhhhh-cc---------------------------ccccccccC--CCCEEEEccCCCCccCHHHHHHHHH
Confidence 11001 11111110 00 011112 3 799999999999999887776654
Q ss_pred ---hccCCceEEEeCCc-ccCC-CCChHHHHHHHHHHHHhhc
Q 023416 242 ---GAKGVTKFVEVPGA-LLPQ-EEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 242 ---~~~~~~~~~~~~~~-H~~~-~e~p~~~~~~i~~fl~~~~ 278 (282)
+.....+++++|++ |... .+...+..+.+.+|+++..
T Consensus 169 ~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 169 ALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp HHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 34445889999999 9544 4556788999999998764
No 74
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.54 E-value=1.3e-13 Score=98.46 Aligned_cols=227 Identities=12% Similarity=0.104 Sum_probs=130.4
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC---CCCchHHHHH-HHHHHhhCCCCCCcCCCCceEEEcccHH
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADVMEK-FVVDLINAPDSPVSSSESDLVIFGGGHA 85 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~~-~l~~~i~~l~~~~~~~~~~~~l~G~s~G 85 (282)
....|++++..+++. ||.|..+|+||-|+|+.+. ..+.+.||+. |+.+.++.++... .+++.+.+|||+|
T Consensus 42 ~~~fYRrfA~~a~~~----Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~G 115 (281)
T COG4757 42 GQYFYRRFAAAAAKA----GFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFG 115 (281)
T ss_pred chhHhHHHHHHhhcc----CceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC--CCCceEEeecccc
Confidence 345567777777776 9999999999999998754 4577777765 5666665554311 1899999999999
Q ss_pred HHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhcccc
Q 023416 86 ATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYS 165 (282)
Q Consensus 86 ~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
|.+.-.+++.. ++......+.. ..+....+ ... -+.........+..+ ......+...+..
T Consensus 116 Gqa~gL~~~~~--k~~a~~vfG~g--agwsg~m~------~~~-~l~~~~l~~lv~p~l--------t~w~g~~p~~l~G 176 (281)
T COG4757 116 GQALGLLGQHP--KYAAFAVFGSG--AGWSGWMG------LRE-RLGAVLLWNLVGPPL--------TFWKGYMPKDLLG 176 (281)
T ss_pred ceeecccccCc--ccceeeEeccc--cccccchh------hhh-cccceeeccccccch--------hhccccCcHhhcC
Confidence 99888777642 33333333221 11111111 000 000000000000010 0111111222222
Q ss_pred CCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccC
Q 023416 166 NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG 245 (282)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~ 245 (282)
-.+.++-..+.+..+..+.+.... .+ .......+.++.+ .+|++.+...+|+.+|+...+.+....+
T Consensus 177 ~G~d~p~~v~RdW~RwcR~p~y~f---------dd--p~~~~~~q~yaaV--rtPi~~~~~~DD~w~P~As~d~f~~~y~ 243 (281)
T COG4757 177 LGSDLPGTVMRDWARWCRHPRYYF---------DD--PAMRNYRQVYAAV--RTPITFSRALDDPWAPPASRDAFASFYR 243 (281)
T ss_pred CCccCcchHHHHHHHHhcCccccc---------cC--hhHhHHHHHHHHh--cCceeeeccCCCCcCCHHHHHHHHHhhh
Confidence 233455555555544443331110 00 0111256778888 9999999999999999999999988777
Q ss_pred CceEEE--eC-----CcccCCCCCh-HHHHHHHHHHH
Q 023416 246 VTKFVE--VP-----GALLPQEEYP-AMVAQELYQFL 274 (282)
Q Consensus 246 ~~~~~~--~~-----~~H~~~~e~p-~~~~~~i~~fl 274 (282)
++.+.. ++ =||+-..-+| |...+.+.+|+
T Consensus 244 nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 244 NAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 665433 22 2488777777 77777777765
No 75
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.53 E-value=3.2e-14 Score=114.40 Aligned_cols=107 Identities=16% Similarity=0.202 Sum_probs=80.2
Q ss_pred CCCcccCcccccchHH-HHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~-~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
+||||.....+..|.. +++.|.... ..|+||++|++|||.|..+........+++++.++++.+.........+++|
T Consensus 46 lIHG~~~s~~~~~w~~~l~~al~~~~--~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhL 123 (442)
T TIGR03230 46 VIHGWTVTGMFESWVPKLVAALYERE--PSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHL 123 (442)
T ss_pred EECCCCcCCcchhhHHHHHHHHHhcc--CCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEE
Confidence 5789986555567876 666665320 1399999999999998776433344677788888887653111111578999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
+||||||.+|..++.+.+.+|.++++++|.
T Consensus 124 IGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 124 LGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred EEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 999999999999999999999999999995
No 76
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.51 E-value=3.3e-12 Score=97.80 Aligned_cols=232 Identities=11% Similarity=0.065 Sum_probs=130.4
Q ss_pred ccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC------CCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccH
Q 023416 11 VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP------KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGH 84 (282)
Q Consensus 11 ~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~------~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~ 84 (282)
...|.+++..|.+..+ ..|.|+++.+.||-.++.. ...|++++.++...++++++.........+++++|||+
T Consensus 15 v~fY~~Fl~~L~~~l~-~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSI 93 (266)
T PF10230_consen 15 VEFYEEFLSALYEKLN-PQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSI 93 (266)
T ss_pred HHHHHHHHHHHHHhCC-CCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcH
Confidence 4667888888876520 2599999999999877654 26799999999988888877642211167899999999
Q ss_pred HHHHHHHHHHhCC---CcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhh---hHHhhhhhcHHHHHHH
Q 023416 85 AATLTVRAAKKNL---VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW---MMYNMLVSNEKAIQSQ 158 (282)
Q Consensus 85 G~~~a~~~~~~~~---~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 158 (282)
|+.++++...+.+ .+|.+++++-|+... ...++........+........... .+... .+..+.++
T Consensus 94 Gayi~levl~r~~~~~~~V~~~~lLfPTi~~-----ia~Sp~G~~l~~~~~~~~~~~~~~~~~~~l~~~---lP~~~~~~ 165 (266)
T PF10230_consen 94 GAYIALEVLKRLPDLKFRVKKVILLFPTIED-----IAKSPNGRRLTPLLFSPPPLVWLASFLSFLLSL---LPESVLRW 165 (266)
T ss_pred HHHHHHHHHHhccccCCceeEEEEeCCcccc-----ccCCchhHHHHHHHhhccHHHHHHHHHHHHHHH---CCHHHHHH
Confidence 9999999999988 889999999987421 1111221111111111000000000 11111 24444444
Q ss_pred HhhccccCCCCCChHHHHHHHHHHhhc-CCCcchHHHhhccCCCCCC-HHHHHHHhhcccCCccEEEEecCCCCCCCHHH
Q 023416 159 YKSHVYSNPDNVTPGIVESRYALTKRK-GARYVPAAFLTGLLDPVNS-REEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 236 (282)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~ 236 (282)
+.......+ +............+ ..+.++..-...+...... .+++.....+- ...+.+++|.+|.++|.+.
T Consensus 166 lv~~~~~~~----~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~--~~kl~f~fg~~D~Wvp~~~ 239 (266)
T PF10230_consen 166 LVRWVMGFP----PPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNEN--GDKLWFYFGQNDHWVPNET 239 (266)
T ss_pred HHHHHcCCC----hHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccC--CCEEEEEEeCCCCCCCHHH
Confidence 443333222 22222222222111 1111111111111111111 13344443332 5689999999999999999
Q ss_pred HHHHHhccCC--ceEEEe-CCc-cc
Q 023416 237 MEALKGAKGV--TKFVEV-PGA-LL 257 (282)
Q Consensus 237 ~~~~~~~~~~--~~~~~~-~~~-H~ 257 (282)
.+++.+..++ .++.+- ++. |.
T Consensus 240 ~~~l~~~~~~~~~~~~v~~~~i~Ha 264 (266)
T PF10230_consen 240 RDELIERYPGHEPDVVVDEEGIPHA 264 (266)
T ss_pred HHHHHHHcCCCCCeEEEecCCCCCC
Confidence 9999887773 344333 444 75
No 77
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.50 E-value=4.4e-13 Score=109.91 Aligned_cols=87 Identities=9% Similarity=0.164 Sum_probs=69.8
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHH---
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVR--- 91 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~--- 91 (282)
+.+++.|.++ ||+|+.+|+++-+.++ ...++++|++.+.+.++.+..... ..++.++|+++||.++..
T Consensus 237 ~SlVr~lv~q----G~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGtl~a~~~a 307 (560)
T TIGR01839 237 KSFVQYCLKN----QLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGLTCAALVG 307 (560)
T ss_pred chHHHHHHHc----CCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchHHHHHHHH
Confidence 5688899998 9999999999977654 467889999877777766531111 678999999999999997
Q ss_pred -HHHhCCC-cccceeeecCCC
Q 023416 92 -AAKKNLV-KPTAIAAVAPTW 110 (282)
Q Consensus 92 -~~~~~~~-~v~~lvl~~p~~ 110 (282)
+++++++ +|++++++.+..
T Consensus 308 ~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 308 HLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred HHHhcCCCCceeeEEeeeccc
Confidence 7888885 799999987654
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.46 E-value=1.1e-11 Score=96.09 Aligned_cols=100 Identities=18% Similarity=0.131 Sum_probs=67.7
Q ss_pred CCCcccCcccccchH--HHHHHHHHhhcCCCeEEEEecC--CCCCCCCCCC--------------------CCCchHH-H
Q 023416 1 MIPTISDVSTVEEWR--LVAQDIVQRVGKVNWRATIVDW--PGLGYSDRPK--------------------MDYNADV-M 55 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~--~~~~~L~~~~~~~g~~vi~~D~--~G~G~S~~~~--------------------~~~~~~~-~ 55 (282)
+++|+.. +...|. ..+..++.. .|+.|++||. +|+|.+.... ..++... +
T Consensus 47 llHG~~~--~~~~~~~~~~~~~la~~---~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~ 121 (275)
T TIGR02821 47 YLSGLTC--THENFMIKAGAQRFAAE---HGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI 121 (275)
T ss_pred EccCCCC--CccHHHhhhHHHHHHhh---cCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHH
Confidence 4677764 344453 344566553 3799999998 5555432110 1233333 3
Q ss_pred HHHHHHHhhCC-CCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 56 EKFVVDLINAP-DSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 56 ~~~l~~~i~~l-~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
++++..++++. ... ..+++++||||||.+|+.++.++|+.+.++++++|.
T Consensus 122 ~~~l~~~~~~~~~~~----~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 122 VQELPALVAAQFPLD----GERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHhhCCCC----CCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 56777777752 221 568999999999999999999999999999999874
No 79
>PLN02442 S-formylglutathione hydrolase
Probab=99.45 E-value=5e-12 Score=98.20 Aligned_cols=97 Identities=23% Similarity=0.231 Sum_probs=62.8
Q ss_pred CCCcccCcccccchHH---HHHHHHHhhcCCCeEEEEecCCCCC-----CCCC---------------CC------CCCc
Q 023416 1 MIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLG-----YSDR---------------PK------MDYN 51 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~---~~~~L~~~~~~~g~~vi~~D~~G~G-----~S~~---------------~~------~~~~ 51 (282)
|++|+.. +...|.. +...++.. |+.|+.+|.+++| .+.. +. ..+-
T Consensus 52 ~lHG~~~--~~~~~~~~~~~~~~~~~~----g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 52 WLSGLTC--TDENFIQKSGAQRAAAAR----GIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred EecCCCc--ChHHHHHhhhHHHHHhhc----CeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 4667653 3345533 33555555 8999999998776 1110 00 0111
Q ss_pred hHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 52 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 52 ~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
.+++...+..+.+.+. ..+++++||||||..|+.++.++|+++.+++.++|.
T Consensus 126 ~~~l~~~i~~~~~~~~------~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 126 VKELPKLLSDNFDQLD------TSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHhcC------CCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 2333333444434343 567899999999999999999999999999998874
No 80
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.41 E-value=6.7e-12 Score=107.61 Aligned_cols=205 Identities=15% Similarity=0.122 Sum_probs=122.8
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCC---CCCCC--CC---CCCchHHHHHHHHHHhhCCCCCCcCC
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL---GYSDR--PK---MDYNADVMEKFVVDLINAPDSPVSSS 73 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~---G~S~~--~~---~~~~~~~~~~~l~~~i~~l~~~~~~~ 73 (282)
++|-........|....+.|+.. ||.|+.++.||- |+.-. .. .....+++.+.+. ++.....- .
T Consensus 400 ~hGGP~~~~~~~~~~~~q~~~~~----G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~---d 471 (620)
T COG1506 400 IHGGPSAQVGYSFNPEIQVLASA----GYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLV---D 471 (620)
T ss_pred eCCCCccccccccchhhHHHhcC----CeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCc---C
Confidence 34554444446778888999998 999999999964 33311 11 2335556665555 44444310 1
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHH
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 153 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
..++.++|||.||.+++..+.+.+ .+.+.+...+... + ..+.. ....
T Consensus 472 ~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~------------------~------------~~~~~--~~~~ 518 (620)
T COG1506 472 PERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD------------------W------------LLYFG--ESTE 518 (620)
T ss_pred hHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch------------------h------------hhhcc--ccch
Confidence 468999999999999999999877 5555555544210 0 00000 0000
Q ss_pred HHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCC
Q 023416 154 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 233 (282)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~ 233 (282)
.++......... +.. ..+. +.... -.....++ ++|+|+|||++|..++
T Consensus 519 ~~~~~~~~~~~~-~~~-~~~~-------------------~~~~s---------p~~~~~~i--~~P~LliHG~~D~~v~ 566 (620)
T COG1506 519 GLRFDPEENGGG-PPE-DREK-------------------YEDRS---------PIFYADNI--KTPLLLIHGEEDDRVP 566 (620)
T ss_pred hhcCCHHHhCCC-ccc-ChHH-------------------HHhcC---------hhhhhccc--CCCEEEEeecCCccCC
Confidence 000000000000 000 0000 00000 12334456 9999999999999999
Q ss_pred HHHHHHHH----hccCCceEEEeCCc-ccCCC-CChHHHHHHHHHHHHhhcC
Q 023416 234 KAEMEALK----GAKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFLQQTFE 279 (282)
Q Consensus 234 ~~~~~~~~----~~~~~~~~~~~~~~-H~~~~-e~p~~~~~~i~~fl~~~~~ 279 (282)
.+.+..+. .....++++++|+. |.+-. ++-..+.+.+.+|+++...
T Consensus 567 ~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 567 IEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 88777664 34556889999999 98666 5677888999999987654
No 81
>PRK11460 putative hydrolase; Provisional
Probab=99.40 E-value=8.7e-12 Score=93.97 Aligned_cols=170 Identities=11% Similarity=0.036 Sum_probs=102.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC-----------CCCC---chHHHHHHHHHHhhCC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-----------KMDY---NADVMEKFVVDLINAP 66 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~-----------~~~~---~~~~~~~~l~~~i~~l 66 (282)
||||+. ++...|..+++.|.+. ++.+..++++|...+... .... .+....+.+.++++.+
T Consensus 21 lLHG~G--~~~~~~~~l~~~l~~~----~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 21 LFHGVG--DNPVAMGEIGSWFAPA----FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred EEeCCC--CChHHHHHHHHHHHHH----CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 467776 4667899999999887 455556666665322110 0011 1122223333333322
Q ss_pred CCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHh
Q 023416 67 DSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 146 (282)
Q Consensus 67 ~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (282)
.........+++++|+|+||.+++.++.++|..+.+++.+++..
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~------------------------------------ 138 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY------------------------------------ 138 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc------------------------------------
Confidence 11100014679999999999999999988887766666554310
Q ss_pred hhhhcHHHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEec
Q 023416 147 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVST 226 (282)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G 226 (282)
. . . +. . ... ++|+++++|
T Consensus 139 -----~---------~-~------~~-----------~----------------------------~~~--~~pvli~hG 156 (232)
T PRK11460 139 -----A---------S-L------PE-----------T----------------------------APT--ATTIHLIHG 156 (232)
T ss_pred -----c---------c-c------cc-----------c----------------------------ccC--CCcEEEEec
Confidence 0 0 0 00 0 001 579999999
Q ss_pred CCCCCCCHHHHHHHHhc----cCCceEEEeCCc-ccCCCCChHHHHHHHHHHH
Q 023416 227 EGSPRRSKAEMEALKGA----KGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 274 (282)
Q Consensus 227 ~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl 274 (282)
++|+++|.+..+++.+. ..++++++++++ |.+..+.-+.+.+.+.++|
T Consensus 157 ~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 157 GEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 99999999888766543 235678889998 9987655555555555544
No 82
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.36 E-value=2.7e-12 Score=90.90 Aligned_cols=193 Identities=16% Similarity=0.166 Sum_probs=118.3
Q ss_pred cccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHH
Q 023416 8 VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAAT 87 (282)
Q Consensus 8 ~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~ 87 (282)
+.+....-+.+.-+-.+ -+..|+.+++||+|.|...+.. +-+.-|-..+++.+-....+-..++++.|-|+||.
T Consensus 88 AGNmGhr~~i~~~fy~~---l~mnv~ivsYRGYG~S~GspsE---~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGA 161 (300)
T KOG4391|consen 88 AGNMGHRLPIARVFYVN---LKMNVLIVSYRGYGKSEGSPSE---EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGA 161 (300)
T ss_pred CCcccchhhHHHHHHHH---cCceEEEEEeeccccCCCCccc---cceeccHHHHHHHHhcCccCCcceEEEEecccCCe
Confidence 34445555556655544 2589999999999999874322 22233344445544332222367899999999999
Q ss_pred HHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCC
Q 023416 88 LTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNP 167 (282)
Q Consensus 88 ~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (282)
+|+..|.+...++.++|+-+..... |.+ ..|.+..+..++ + ....+.+
T Consensus 162 vai~lask~~~ri~~~ivENTF~SI--p~~------------------~i~~v~p~~~k~-------i----~~lc~kn- 209 (300)
T KOG4391|consen 162 VAIHLASKNSDRISAIIVENTFLSI--PHM------------------AIPLVFPFPMKY-------I----PLLCYKN- 209 (300)
T ss_pred eEEEeeccchhheeeeeeechhccc--hhh------------------hhheeccchhhH-------H----HHHHHHh-
Confidence 9999999988899999987753211 000 000000000000 0 0000000
Q ss_pred CCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccC--
Q 023416 168 DNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-- 245 (282)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-- 245 (282)
.+. + ...+.+- +.|.|+|.|..|.++|+.+++++.+..|
T Consensus 210 ----------~~~-----------------------S----~~ki~~~--~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~ 250 (300)
T KOG4391|consen 210 ----------KWL-----------------------S----YRKIGQC--RMPFLFISGLKDELVPPVMMRQLYELCPSR 250 (300)
T ss_pred ----------hhc-----------------------c----hhhhccc--cCceEEeecCccccCCcHHHHHHHHhCchh
Confidence 000 0 0111122 7899999999999999999999887665
Q ss_pred CceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhc
Q 023416 246 VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 246 ~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
..++.++|+| |.--+- -+-..++|.+||.+..
T Consensus 251 ~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 251 TKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVV 283 (300)
T ss_pred hhhheeCCCCccCceEE-eccHHHHHHHHHHHhc
Confidence 3568999999 974332 2456789999998754
No 83
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.32 E-value=2.2e-12 Score=99.43 Aligned_cols=105 Identities=17% Similarity=0.237 Sum_probs=73.1
Q ss_pred CCCcccCcccccchHH-HHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~-~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
++|||.... ...|.. +.+.+.+. .+|+|+++|++|++.+..+....+...+.+++.++++.+.........++++
T Consensus 41 lIHG~~~~~-~~~~~~~l~~~ll~~---~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~l 116 (275)
T cd00707 41 IIHGWTSSG-EESWISDLRKAYLSR---GDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHL 116 (275)
T ss_pred EEcCCCCCC-CCcHHHHHHHHHHhc---CCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEE
Confidence 578887533 246654 44445432 1599999999998544333333455666667777766553110001468999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
+||||||.+|..++.+.+.++.++++++|.
T Consensus 117 IGhSlGa~vAg~~a~~~~~~v~~iv~LDPa 146 (275)
T cd00707 117 IGHSLGAHVAGFAGKRLNGKLGRITGLDPA 146 (275)
T ss_pred EEecHHHHHHHHHHHHhcCccceeEEecCC
Confidence 999999999999999999999999999985
No 84
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.32 E-value=1.3e-11 Score=97.61 Aligned_cols=200 Identities=16% Similarity=0.185 Sum_probs=107.0
Q ss_pred chHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHH
Q 023416 13 EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRA 92 (282)
Q Consensus 13 ~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~ 92 (282)
.|..+.+.|+.+ |+.++++|.||-|.|..-....+.+.+...+.+.+.....- -..+|.++|.|+||.+|.+.
T Consensus 206 ~~~l~~~~l~~r----GiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~V---D~~RV~~~G~SfGGy~AvRl 278 (411)
T PF06500_consen 206 LYRLFRDYLAPR----GIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWV---DHTRVGAWGFSFGGYYAVRL 278 (411)
T ss_dssp GHHHHHCCCHHC----T-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTE---EEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHhC----CCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCcc---ChhheEEEEeccchHHHHHH
Confidence 344555678888 99999999999999965322233345556666666554310 13578899999999999999
Q ss_pred HHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCCCCCCh
Q 023416 93 AKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTP 172 (282)
Q Consensus 93 ~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (282)
|..++.+++++|..+|....- +..+ .... ..+......+... +. ....++
T Consensus 279 A~le~~RlkavV~~Ga~vh~~---------------------ft~~----~~~~---~~P~my~d~LA~r-lG-~~~~~~ 328 (411)
T PF06500_consen 279 AALEDPRLKAVVALGAPVHHF---------------------FTDP----EWQQ---RVPDMYLDVLASR-LG-MAAVSD 328 (411)
T ss_dssp HHHTTTT-SEEEEES---SCG---------------------GH-H----HHHT---TS-HHHHHHHHHH-CT--SCE-H
T ss_pred HHhcccceeeEeeeCchHhhh---------------------hccH----HHHh---cCCHHHHHHHHHH-hC-CccCCH
Confidence 988888999999998753210 0000 0000 0111111111111 10 001122
Q ss_pred HHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHh--hcccCCccEEEEecCCCCCCCHHHHHHHHhccCCceEE
Q 023416 173 GIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF--ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFV 250 (282)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 250 (282)
+........ ..+. ....+ .+. .+|+|.+.|++|+++|.+..+.+.....+.+..
T Consensus 329 ~~l~~el~~---------------~SLk-------~qGlL~~rr~--~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~ 384 (411)
T PF06500_consen 329 ESLRGELNK---------------FSLK-------TQGLLSGRRC--PTPLLAINGEDDPVSPIEDSRLIAESSTDGKAL 384 (411)
T ss_dssp HHHHHHGGG---------------GSTT-------TTTTTTSS-B--SS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEE
T ss_pred HHHHHHHHh---------------cCcc-------hhccccCCCC--CcceEEeecCCCCCCCHHHHHHHHhcCCCCcee
Confidence 111110000 0000 01112 233 899999999999999999999888877767777
Q ss_pred EeCCc--ccCCCCChHHHHHHHHHHHHhh
Q 023416 251 EVPGA--LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 251 ~~~~~--H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
.++.. |... ++-...+.+||++.
T Consensus 385 ~~~~~~~~~gy----~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 385 RIPSKPLHMGY----PQALDEIYKWLEDK 409 (411)
T ss_dssp EE-SSSHHHHH----HHHHHHHHHHHHHH
T ss_pred ecCCCccccch----HHHHHHHHHHHHHh
Confidence 77764 6533 35667788888753
No 85
>PRK10162 acetyl esterase; Provisional
Probab=99.31 E-value=3.7e-10 Score=89.33 Aligned_cols=91 Identities=9% Similarity=-0.003 Sum_probs=62.1
Q ss_pred ccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHH---HHHHHhhCCCCCCcCCCCceEEEcccHH
Q 023416 9 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK---FVVDLINAPDSPVSSSESDLVIFGGGHA 85 (282)
Q Consensus 9 ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~---~l~~~i~~l~~~~~~~~~~~~l~G~s~G 85 (282)
.+...|..+...|++. .|+.|+++|+|...+...|. .+++..+ .+.+..+.++.. ..+++++|+|+|
T Consensus 95 g~~~~~~~~~~~la~~---~g~~Vv~vdYrlape~~~p~---~~~D~~~a~~~l~~~~~~~~~d----~~~i~l~G~SaG 164 (318)
T PRK10162 95 GNLDTHDRIMRLLASY---SGCTVIGIDYTLSPEARFPQ---AIEEIVAVCCYFHQHAEDYGIN----MSRIGFAGDSAG 164 (318)
T ss_pred CCchhhhHHHHHHHHH---cCCEEEEecCCCCCCCCCCC---cHHHHHHHHHHHHHhHHHhCCC----hhHEEEEEECHH
Confidence 4556788889999875 37999999999755433222 3333333 333333444432 468999999999
Q ss_pred HHHHHHHHHhC------CCcccceeeecCC
Q 023416 86 ATLTVRAAKKN------LVKPTAIAAVAPT 109 (282)
Q Consensus 86 ~~~a~~~~~~~------~~~v~~lvl~~p~ 109 (282)
|.+|+..+... +.++.+++++.|.
T Consensus 165 G~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 165 AMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred HHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 99999887632 3578889998874
No 86
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.30 E-value=1.7e-10 Score=87.30 Aligned_cols=94 Identities=14% Similarity=0.222 Sum_probs=74.4
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEc
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFG 81 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G 81 (282)
+|+.. ++...|.++++.|... ++.|++++.+|++.... ...+++++++...+.|..... ..+++|+|
T Consensus 6 ~p~~g--G~~~~y~~la~~l~~~----~~~v~~i~~~~~~~~~~--~~~si~~la~~y~~~I~~~~~-----~gp~~L~G 72 (229)
T PF00975_consen 6 FPPAG--GSASSYRPLARALPDD----VIGVYGIEYPGRGDDEP--PPDSIEELASRYAEAIRARQP-----EGPYVLAG 72 (229)
T ss_dssp ESSTT--CSGGGGHHHHHHHTTT----EEEEEEECSTTSCTTSH--EESSHHHHHHHHHHHHHHHTS-----SSSEEEEE
T ss_pred EcCCc--cCHHHHHHHHHhCCCC----eEEEEEEecCCCCCCCC--CCCCHHHHHHHHHHHhhhhCC-----CCCeeehc
Confidence 56665 3778899999999984 39999999999983332 457899999998888876652 33999999
Q ss_pred ccHHHHHHHHHHH---hCCCcccceeeecC
Q 023416 82 GGHAATLTVRAAK---KNLVKPTAIAAVAP 108 (282)
Q Consensus 82 ~s~G~~~a~~~~~---~~~~~v~~lvl~~p 108 (282)
||+||.+|...|. .....|..++++++
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 9999999999987 34556889999985
No 87
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.25 E-value=1.4e-11 Score=93.51 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=59.0
Q ss_pred CCcccC-cccccchHHHHHHHHHhhcCCCeEEEEecCC----CCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCc--CCC
Q 023416 2 IPTISD-VSTVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRPKMDYNADVMEKFVVDLINAPDSPVS--SSE 74 (282)
Q Consensus 2 ~p~~~~-~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~--~~~ 74 (282)
|.||.+ ..+.-....+++.|... ||.|+-+-++ |+|- .+++.-++||.++++.+...+. .-.
T Consensus 39 IGGLtDGl~tvpY~~~La~aL~~~----~wsl~q~~LsSSy~G~G~-------~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 39 IGGLTDGLLTVPYLPDLAEALEET----GWSLFQVQLSSSYSGWGT-------SSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp E--TT--TT-STCHHHHHHHHT-T----T-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS------
T ss_pred ECCCCCCCCCCchHHHHHHHhccC----CeEEEEEEecCccCCcCc-------chhhhHHHHHHHHHHHHHHhhccccCC
Confidence 455554 23334455677777655 7999998654 4443 4667778888888776642211 014
Q ss_pred CceEEEcccHHHHHHHHHHHhC-----CCcccceeeecCCCC
Q 023416 75 SDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAPTWA 111 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~~~-----~~~v~~lvl~~p~~~ 111 (282)
.+|+|||||.|+.-+++|..+. ...|++.||-+|.+.
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 6899999999999999998743 367999999999753
No 88
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.23 E-value=5.4e-10 Score=89.39 Aligned_cols=85 Identities=11% Similarity=0.224 Sum_probs=67.4
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
+.+++.|.+ |+.|+..|+.--+..+.....++++++++.+.+++++++ .+++++|.++||.+++.+++
T Consensus 120 RS~V~~Ll~-----g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G-------~~v~l~GvCqgG~~~laa~A 187 (406)
T TIGR01849 120 RSTVEALLP-----DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLG-------PDIHVIAVCQPAVPVLAAVA 187 (406)
T ss_pred HHHHHHHhC-----CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhC-------CCCcEEEEchhhHHHHHHHH
Confidence 456666665 599999999877765544578999999999999998885 34999999999999776655
Q ss_pred -----hCCCcccceeeecCCCC
Q 023416 95 -----KNLVKPTAIAAVAPTWA 111 (282)
Q Consensus 95 -----~~~~~v~~lvl~~p~~~ 111 (282)
..|.+++++++++++..
T Consensus 188 l~a~~~~p~~~~sltlm~~PID 209 (406)
T TIGR01849 188 LMAENEPPAQPRSMTLMGGPID 209 (406)
T ss_pred HHHhcCCCCCcceEEEEecCcc
Confidence 33677999999977543
No 89
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.23 E-value=2.1e-10 Score=87.90 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=83.7
Q ss_pred CCCcccCcccccchHHHHHHHHHh---hcC--CCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQR---VGK--VNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSE 74 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~---~~~--~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~ 74 (282)
|++||. +|..+|.++++.|.+. +.+ .-|.||+|.+||||.|+.+. ..++....+..+..++-.++ -
T Consensus 157 l~HGwP--Gsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg------~ 228 (469)
T KOG2565|consen 157 LLHGWP--GSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLG------Y 228 (469)
T ss_pred EecCCC--chHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhC------c
Confidence 467887 4778888999999764 111 23799999999999999875 67888899999999999998 7
Q ss_pred CceEEEcccHHHHHHHHHHHhCCCcccceeeecC
Q 023416 75 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
.++.+=|+.+|+.++...+..+|++|.++=+-.+
T Consensus 229 nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 229 NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred ceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 8899999999999999999999999988665443
No 90
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.22 E-value=1.7e-09 Score=77.81 Aligned_cols=86 Identities=12% Similarity=0.106 Sum_probs=65.2
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEc
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFG 81 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G 81 (282)
|+||.++..+..-..+.+.+++.+ ....++++|++ .+.+...+.+.++++... ...++|+|
T Consensus 5 lHGF~Ssp~S~Ka~~l~~~~~~~~--~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~------~~~~~liG 65 (187)
T PF05728_consen 5 LHGFNSSPQSFKAQALKQYFAEHG--PDIQYPCPDLP-----------PFPEEAIAQLEQLIEELK------PENVVLIG 65 (187)
T ss_pred ecCCCCCCCCHHHHHHHHHHHHhC--CCceEECCCCC-----------cCHHHHHHHHHHHHHhCC------CCCeEEEE
Confidence 789988777777777777888761 12456666664 344666788888998887 55699999
Q ss_pred ccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 82 GGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 82 ~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
.||||.+|..++.++..+ + ||++|.
T Consensus 66 SSlGG~~A~~La~~~~~~--a-vLiNPa 90 (187)
T PF05728_consen 66 SSLGGFYATYLAERYGLP--A-VLINPA 90 (187)
T ss_pred EChHHHHHHHHHHHhCCC--E-EEEcCC
Confidence 999999999999987654 3 889985
No 91
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.21 E-value=1e-10 Score=83.14 Aligned_cols=152 Identities=13% Similarity=0.176 Sum_probs=97.7
Q ss_pred CCCcccCcccccchHHH-HHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWRLV-AQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~-~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
++||+.+... .+|.+- .+.|... ++|-.+|+ + ..+.++|...+.+.+..+ ..++++
T Consensus 3 IvhG~~~s~~-~HW~~wl~~~l~~~-----~~V~~~~~------~----~P~~~~W~~~l~~~i~~~-------~~~~il 59 (171)
T PF06821_consen 3 IVHGYGGSPP-DHWQPWLERQLENS-----VRVEQPDW------D----NPDLDEWVQALDQAIDAI-------DEPTIL 59 (171)
T ss_dssp EE--TTSSTT-TSTHHHHHHHHTTS-----EEEEEC--------T----S--HHHHHHHHHHCCHC--------TTTEEE
T ss_pred EeCCCCCCCc-cHHHHHHHHhCCCC-----eEEecccc------C----CCCHHHHHHHHHHHHhhc-------CCCeEE
Confidence 5789986555 778774 4444443 88888777 2 236788999999888876 467999
Q ss_pred EcccHHHHHHHHHH-HhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHH
Q 023416 80 FGGGHAATLTVRAA-KKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 158 (282)
Q Consensus 80 ~G~s~G~~~a~~~~-~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (282)
+|||+|+..+++++ .....+|.+++|++|.... . .. ....
T Consensus 60 VaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~-----------------------~------~~-----~~~~----- 100 (171)
T PF06821_consen 60 VAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD-----------------------D------PE-----PFPP----- 100 (171)
T ss_dssp EEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG-----------------------C------HH-----CCTC-----
T ss_pred EEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc-----------------------c------cc-----chhh-----
Confidence 99999999999999 7788899999999984210 0 00 0000
Q ss_pred HhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHH
Q 023416 159 YKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEME 238 (282)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~ 238 (282)
....+. . .. ...+ .+|.++|.+++|+++|.+.++
T Consensus 101 -~~~~f~-----------------------~------------------~p--~~~l--~~~~~viaS~nDp~vp~~~a~ 134 (171)
T PF06821_consen 101 -ELDGFT-----------------------P------------------LP--RDPL--PFPSIVIASDNDPYVPFERAQ 134 (171)
T ss_dssp -GGCCCT-----------------------T------------------SH--CCHH--HCCEEEEEETTBSSS-HHHHH
T ss_pred -hccccc-----------------------c------------------Cc--cccc--CCCeEEEEcCCCCccCHHHHH
Confidence 000000 0 00 0011 467899999999999999999
Q ss_pred HHHhccCCceEEEeCCc-ccCCCC
Q 023416 239 ALKGAKGVTKFVEVPGA-LLPQEE 261 (282)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-H~~~~e 261 (282)
.+++.. +++++.++++ |+.-.+
T Consensus 135 ~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 135 RLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHH-T-EEEEETS-TTSSGGG
T ss_pred HHHHHc-CCCeEECCCCCCccccc
Confidence 999887 5789999999 996554
No 92
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.19 E-value=7.9e-10 Score=82.87 Aligned_cols=164 Identities=15% Similarity=0.099 Sum_probs=95.1
Q ss_pred chHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC---CC--CC------chHHHHHHHHHHhhCCCCCCcCCCCceEEEc
Q 023416 13 EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP---KM--DY------NADVMEKFVVDLINAPDSPVSSSESDLVIFG 81 (282)
Q Consensus 13 ~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~---~~--~~------~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G 81 (282)
..+.+++.|++. ||.|++||+-+-...... .. .+ ..+...+++.+.++.+.........++.++|
T Consensus 29 ~~~~~ad~lA~~----Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vG 104 (218)
T PF01738_consen 29 NIRDLADRLAEE----GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVG 104 (218)
T ss_dssp HHHHHHHHHHHT----T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEE
T ss_pred HHHHHHHHHHhc----CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEE
Confidence 345678888887 999999998654431111 10 00 1245566665556555422111146899999
Q ss_pred ccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhh
Q 023416 82 GGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKS 161 (282)
Q Consensus 82 ~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (282)
.|+||.+++.++.+. ..+++.+..-|...
T Consensus 105 fc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-------------------------------------------------- 133 (218)
T PF01738_consen 105 FCWGGKLALLLAARD-PRVDAAVSFYGGSP-------------------------------------------------- 133 (218)
T ss_dssp ETHHHHHHHHHHCCT-TTSSEEEEES-SSS--------------------------------------------------
T ss_pred EecchHHhhhhhhhc-cccceEEEEcCCCC--------------------------------------------------
Confidence 999999999998765 45565555432000
Q ss_pred ccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHH
Q 023416 162 HVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK 241 (282)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~ 241 (282)
.........++ ++|+++++|++|+.++.+..+.+.
T Consensus 134 -------------------------------------------~~~~~~~~~~~--~~P~l~~~g~~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 134 -------------------------------------------PPPPLEDAPKI--KAPVLILFGENDPFFPPEEVEALE 168 (218)
T ss_dssp -------------------------------------------GGGHHHHGGG----S-EEEEEETT-TTS-HHHHHHHH
T ss_pred -------------------------------------------CCcchhhhccc--CCCEeecCccCCCCCChHHHHHHH
Confidence 00012223344 899999999999999988655554
Q ss_pred ----hccCCceEEEeCCc-ccCCCCCh--------HHHHHHHHHHHHh
Q 023416 242 ----GAKGVTKFVEVPGA-LLPQEEYP--------AMVAQELYQFLQQ 276 (282)
Q Consensus 242 ----~~~~~~~~~~~~~~-H~~~~e~p--------~~~~~~i~~fl~~ 276 (282)
+.....++++++|+ |....... ++-.+.+.+||++
T Consensus 169 ~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 169 EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 34567889999999 97654322 3345566677754
No 93
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.19 E-value=2.2e-10 Score=85.38 Aligned_cols=81 Identities=11% Similarity=-0.043 Sum_probs=53.1
Q ss_pred CeEEEEecCCCCCCCCCC-C----CC-CchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccc
Q 023416 29 NWRATIVDWPGLGYSDRP-K----MD-YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTA 102 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~-~----~~-~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~ 102 (282)
||.|++||.+|+|.+... . .. ........++.++++.+......-..+++|+|||+||.+++.++.++|+.+.+
T Consensus 43 g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~ 122 (212)
T TIGR01840 43 GFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAG 122 (212)
T ss_pred CeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheE
Confidence 899999999999854321 0 00 00011233344444433221111146899999999999999999999999999
Q ss_pred eeeecCC
Q 023416 103 IAAVAPT 109 (282)
Q Consensus 103 lvl~~p~ 109 (282)
++.+++.
T Consensus 123 ~~~~~g~ 129 (212)
T TIGR01840 123 GASNAGL 129 (212)
T ss_pred EEeecCC
Confidence 8888753
No 94
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.15 E-value=9.3e-09 Score=89.87 Aligned_cols=88 Identities=15% Similarity=0.065 Sum_probs=63.0
Q ss_pred HHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCC-------------CcC-CCCceEEEcc
Q 023416 17 VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP-------------VSS-SESDLVIFGG 82 (282)
Q Consensus 17 ~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~-------------~~~-~~~~~~l~G~ 82 (282)
..+.|..+ ||.|+..|.||+|.|+.....+. .+-.+|..++|+-+... +.. -..+|.++|.
T Consensus 271 ~~~~~~~r----GYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 271 LNDYFLPR----GFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHHHhC----CeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 45688888 99999999999999987432222 23344555555443311 000 1468999999
Q ss_pred cHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 83 GHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 83 s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
|+||.++...|...|..++++|.+++.
T Consensus 346 SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 346 SYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred cHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 999999999999888888888887764
No 95
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.14 E-value=1.5e-10 Score=99.27 Aligned_cols=89 Identities=11% Similarity=0.008 Sum_probs=68.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC---------C---C-----------CCchHHHHH
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP---------K---M-----------DYNADVMEK 57 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~---------~---~-----------~~~~~~~~~ 57 (282)
++||+. ++...|..+++.|++. ||+|+++|+||||+|... . . ..+++..+.
T Consensus 454 llHG~~--g~~~~~~~lA~~La~~----Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 454 YQHGIT--GAKENALAFAGTLAAA----GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred EeCCCC--CCHHHHHHHHHHHHhC----CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 467776 4567899999999987 899999999999999432 1 1 127789999
Q ss_pred HHHHHhhCCCC-----CC---c--CCCCceEEEcccHHHHHHHHHHHh
Q 023416 58 FVVDLINAPDS-----PV---S--SSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 58 ~l~~~i~~l~~-----~~---~--~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
|+..+...+.. .. . ....+++++||||||.+++.++..
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 99988887761 10 0 125689999999999999999874
No 96
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.14 E-value=5.3e-09 Score=73.16 Aligned_cols=153 Identities=16% Similarity=0.234 Sum_probs=99.5
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHH--HHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHH
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVM--EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRA 92 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~ 92 (282)
..++..|.+. ||.++.+|+||-|+|...- +..+-+. +....+++++.... .....+.|.|+|+.+++..
T Consensus 50 ~~la~~l~~~----G~atlRfNfRgVG~S~G~f-D~GiGE~~Da~aaldW~~~~hp~----s~~~~l~GfSFGa~Ia~~l 120 (210)
T COG2945 50 QTLARALVKR----GFATLRFNFRGVGRSQGEF-DNGIGELEDAAAALDWLQARHPD----SASCWLAGFSFGAYIAMQL 120 (210)
T ss_pred HHHHHHHHhC----CceEEeecccccccccCcc-cCCcchHHHHHHHHHHHHhhCCC----chhhhhcccchHHHHHHHH
Confidence 3455566666 9999999999999998752 2333332 22233444443311 1223579999999999999
Q ss_pred HHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCCCCCCh
Q 023416 93 AKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTP 172 (282)
Q Consensus 93 ~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (282)
+.+.|+. ...+.+.|.. + . +... +
T Consensus 121 a~r~~e~-~~~is~~p~~----------------------------------------~--~----~dfs-~-------- 144 (210)
T COG2945 121 AMRRPEI-LVFISILPPI----------------------------------------N--A----YDFS-F-------- 144 (210)
T ss_pred HHhcccc-cceeeccCCC----------------------------------------C--c----hhhh-h--------
Confidence 9986553 2223222210 0 0 0000 0
Q ss_pred HHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCCceEEEe
Q 023416 173 GIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEV 252 (282)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 252 (282)
+... .+|.++|+|+.|.+++.+..-++.+. ...+++.+
T Consensus 145 ---------------------------------------l~P~--P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i 182 (210)
T COG2945 145 ---------------------------------------LAPC--PSPGLVIQGDADDVVDLVAVLKWQES-IKITVITI 182 (210)
T ss_pred ---------------------------------------ccCC--CCCceeEecChhhhhcHHHHHHhhcC-CCCceEEe
Confidence 0001 67999999999999998877777776 45678999
Q ss_pred CCc-ccCCCCChHHHHHHHHHHHH
Q 023416 253 PGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 253 ~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
+++ |+.+- +-+.+.+.|.+||.
T Consensus 183 ~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 183 PGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred cCCCceecc-cHHHHHHHHHHHhh
Confidence 999 99776 45678889999985
No 97
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.12 E-value=9.7e-10 Score=93.50 Aligned_cols=87 Identities=17% Similarity=0.027 Sum_probs=68.3
Q ss_pred HHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhC
Q 023416 17 VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN 96 (282)
Q Consensus 17 ~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~ 96 (282)
....|+++ ||.|+++|+||+|.|+.....++ ...++|+.++++.+..... ...++.++|+|+||.+++.++..+
T Consensus 45 ~~~~l~~~----Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~ 118 (550)
T TIGR00976 45 EPAWFVAQ----GYAVVIQDTRGRGASEGEFDLLG-SDEAADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQ 118 (550)
T ss_pred cHHHHHhC----CcEEEEEeccccccCCCceEecC-cccchHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccC
Confidence 45577777 89999999999999987543343 5677788888776642211 145899999999999999999999
Q ss_pred CCcccceeeecCC
Q 023416 97 LVKPTAIAAVAPT 109 (282)
Q Consensus 97 ~~~v~~lvl~~p~ 109 (282)
|..+++++..++.
T Consensus 119 ~~~l~aiv~~~~~ 131 (550)
T TIGR00976 119 PPALRAIAPQEGV 131 (550)
T ss_pred CCceeEEeecCcc
Confidence 9999999988764
No 98
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.10 E-value=1.8e-10 Score=70.46 Aligned_cols=58 Identities=12% Similarity=0.143 Sum_probs=48.0
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhh
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLIN 64 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~ 64 (282)
+++|+. ..+..|.++++.|+++ ||.|+++|+||||+|+... ..-+++++++|+..+++
T Consensus 21 i~HG~~--eh~~ry~~~a~~L~~~----G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 21 IVHGFG--EHSGRYAHLAEFLAEQ----GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EeCCcH--HHHHHHHHHHHHHHhC----CCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 356775 3456799999999998 9999999999999998754 44588999999998874
No 99
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.09 E-value=1.1e-09 Score=102.74 Aligned_cols=93 Identities=9% Similarity=0.063 Sum_probs=77.6
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEc
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFG 81 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G 81 (282)
+|++.. +...|.++++.|... ++|+++|+||+|.+. ...++++++++++.+.++.+.. ..+++++|
T Consensus 1074 lh~~~g--~~~~~~~l~~~l~~~-----~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~-----~~p~~l~G 1139 (1296)
T PRK10252 1074 FHPASG--FAWQFSVLSRYLDPQ-----WSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQP-----HGPYHLLG 1139 (1296)
T ss_pred ecCCCC--chHHHHHHHHhcCCC-----CcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCC-----CCCEEEEE
Confidence 566653 457899999999876 999999999999763 2468999999999999987652 45899999
Q ss_pred ccHHHHHHHHHHHh---CCCcccceeeecC
Q 023416 82 GGHAATLTVRAAKK---NLVKPTAIAAVAP 108 (282)
Q Consensus 82 ~s~G~~~a~~~~~~---~~~~v~~lvl~~p 108 (282)
||+||.+|..++.+ .+.++..++++++
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred echhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 99999999999884 5788999999876
No 100
>PLN00021 chlorophyllase
Probab=99.08 E-value=3.8e-10 Score=88.33 Aligned_cols=103 Identities=13% Similarity=0.052 Sum_probs=66.3
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcC-CCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS-SESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l 79 (282)
++||+.. +...|..+++.|+++ ||.|+++|++|++.+.......+..+..+.+.+.++.+...... -..++++
T Consensus 57 ~lHG~~~--~~~~y~~l~~~Las~----G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 57 FLHGYLL--YNSFYSQLLQHIASH----GFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred EECCCCC--CcccHHHHHHHHHhC----CCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 3677763 456788999999998 89999999999764322111111222222333222222110000 1367999
Q ss_pred EcccHHHHHHHHHHHhCC-----CcccceeeecCC
Q 023416 80 FGGGHAATLTVRAAKKNL-----VKPTAIAAVAPT 109 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~-----~~v~~lvl~~p~ 109 (282)
+|||+||.+|+.++.+++ .++.++|+++|.
T Consensus 131 ~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 131 AGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred EEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 999999999999998766 357888888874
No 101
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.07 E-value=3.4e-10 Score=92.03 Aligned_cols=92 Identities=12% Similarity=0.105 Sum_probs=70.2
Q ss_pred ccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHh----hCCCCCCcCCCCceEEEcccH
Q 023416 9 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLI----NAPDSPVSSSESDLVIFGGGH 84 (282)
Q Consensus 9 ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i----~~l~~~~~~~~~~~~l~G~s~ 84 (282)
.+...|..+++.|.+. ||.+ ..|++|+|.+.+.. ...+++.+++.+++ +..+ +.+++|+||||
T Consensus 105 ~~~~~~~~li~~L~~~----GY~~-~~dL~g~gYDwR~~--~~~~~~~~~Lk~lIe~~~~~~g------~~kV~LVGHSM 171 (440)
T PLN02733 105 DEVYYFHDMIEQLIKW----GYKE-GKTLFGFGYDFRQS--NRLPETMDGLKKKLETVYKASG------GKKVNIISHSM 171 (440)
T ss_pred chHHHHHHHHHHHHHc----CCcc-CCCcccCCCCcccc--ccHHHHHHHHHHHHHHHHHHcC------CCCEEEEEECH
Confidence 4568899999999998 7755 89999999998753 22344445555444 4444 67999999999
Q ss_pred HHHHHHHHHHhCCCc----ccceeeecCCCCCC
Q 023416 85 AATLTVRAAKKNLVK----PTAIAAVAPTWAGP 113 (282)
Q Consensus 85 G~~~a~~~~~~~~~~----v~~lvl~~p~~~~~ 113 (282)
||.++..++..+|+. |+++|.++++..+.
T Consensus 172 GGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 172 GGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred hHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 999999999877754 68888998875543
No 102
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.01 E-value=1.6e-09 Score=78.56 Aligned_cols=202 Identities=10% Similarity=0.107 Sum_probs=96.1
Q ss_pred CcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCC-CCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEc
Q 023416 3 PTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFG 81 (282)
Q Consensus 3 p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G 81 (282)
|||+ .....|..++.+|+.+ ||+|+.+|-.-| |.|+..-..++++...+++..+++.+. ... ..++-|+.
T Consensus 37 ~Gf~--rrmdh~agLA~YL~~N----GFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~-~~g--~~~~GLIA 107 (294)
T PF02273_consen 37 PGFA--RRMDHFAGLAEYLSAN----GFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLA-TRG--IRRIGLIA 107 (294)
T ss_dssp -TT---GGGGGGHHHHHHHHTT----T--EEEE---B-------------HHHHHHHHHHHHHHHH-HTT-----EEEEE
T ss_pred cchh--HHHHHHHHHHHHHhhC----CeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHH-hcC--CCcchhhh
Confidence 5664 5788999999999998 999999999987 999887778999999888887776554 111 66788999
Q ss_pred ccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhh
Q 023416 82 GGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKS 161 (282)
Q Consensus 82 ~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (282)
.|+.+.+|...+.+- .+.-+|...... . ....+...+....++... ..+.. .
T Consensus 108 aSLSaRIAy~Va~~i--~lsfLitaVGVV--------n-------lr~TLe~al~~Dyl~~~i--------~~lp~---d 159 (294)
T PF02273_consen 108 ASLSARIAYEVAADI--NLSFLITAVGVV--------N-------LRDTLEKALGYDYLQLPI--------EQLPE---D 159 (294)
T ss_dssp ETTHHHHHHHHTTTS----SEEEEES--S----------------HHHHHHHHHSS-GGGS-G--------GG--S---E
T ss_pred hhhhHHHHHHHhhcc--CcceEEEEeeee--------e-------HHHHHHHHhccchhhcch--------hhCCC---c
Confidence 999999999999852 234444433210 0 011111111100000000 00000 0
Q ss_pred ccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHH
Q 023416 162 HVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK 241 (282)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~ 241 (282)
.-+ ....+..+. +...... . ...+.+.....++++ .+|++.+++++|.++......++.
T Consensus 160 ldf-eGh~l~~~v---Fv~dc~e------------~---~w~~l~ST~~~~k~l--~iP~iaF~A~~D~WV~q~eV~~~~ 218 (294)
T PF02273_consen 160 LDF-EGHNLGAEV---FVTDCFE------------H---GWDDLDSTINDMKRL--SIPFIAFTANDDDWVKQSEVEELL 218 (294)
T ss_dssp EEE-TTEEEEHHH---HHHHHHH------------T---T-SSHHHHHHHHTT----S-EEEEEETT-TTS-HHHHHHHH
T ss_pred ccc-cccccchHH---HHHHHHH------------c---CCccchhHHHHHhhC--CCCEEEEEeCCCccccHHHHHHHH
Confidence 000 000011000 1111111 1 111334456777888 999999999999999988777776
Q ss_pred hc--cCCceEEEeCCc-ccCCCCCh
Q 023416 242 GA--KGVTKFVEVPGA-LLPQEEYP 263 (282)
Q Consensus 242 ~~--~~~~~~~~~~~~-H~~~~e~p 263 (282)
.. -+..+++.++|+ |-+.. +|
T Consensus 219 ~~~~s~~~klysl~Gs~HdL~e-nl 242 (294)
T PF02273_consen 219 DNINSNKCKLYSLPGSSHDLGE-NL 242 (294)
T ss_dssp TT-TT--EEEEEETT-SS-TTS-SH
T ss_pred HhcCCCceeEEEecCccchhhh-Ch
Confidence 63 456789999999 98543 44
No 103
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.00 E-value=4e-09 Score=82.82 Aligned_cols=245 Identities=9% Similarity=0.043 Sum_probs=123.3
Q ss_pred HHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHH-HHH----HHHhhCCCCCCcCCCCceEEEcccHHHHHHH
Q 023416 16 LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME-KFV----VDLINAPDSPVSSSESDLVIFGGGHAATLTV 90 (282)
Q Consensus 16 ~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~-~~l----~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~ 90 (282)
.++..|.++ |+.|+.+|+++=..+.. ..++++++ +.+ ..+.+..+ .+++.++|+++||.+..
T Consensus 130 s~V~~l~~~----g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg------~~~InliGyCvGGtl~~ 196 (445)
T COG3243 130 SLVRWLLEQ----GLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITG------QKDINLIGYCVGGTLLA 196 (445)
T ss_pred cHHHHHHHc----CCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhC------ccccceeeEecchHHHH
Confidence 466778887 89999999987666554 44566666 333 33334443 58899999999999999
Q ss_pred HHHHhCCCc-ccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcch----hhhHHhhhhhcHHHHHHHHhhcccc
Q 023416 91 RAAKKNLVK-PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV----GWMMYNMLVSNEKAIQSQYKSHVYS 165 (282)
Q Consensus 91 ~~~~~~~~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
.++..++.+ |++++++........+...+.-.........-........+ ....|.++..+.-... .+......
T Consensus 197 ~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~-~fV~nyl~ 275 (445)
T COG3243 197 AALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWN-YFVNNYLD 275 (445)
T ss_pred HHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccchH-HHHHHhcC
Confidence 988877776 99999886543211111001001110011111111111111 1122333311111112 11111111
Q ss_pred CCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCC-C-----CHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHH
Q 023416 166 NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPV-N-----SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEA 239 (282)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~ 239 (282)
....++-+.. ++......-.......+++.....+ . ......-.+.++ +||++++.|++|.+.|.+....
T Consensus 276 ge~pl~fdll--yWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~I--t~pvy~~a~~~DhI~P~~Sv~~ 351 (445)
T COG3243 276 GEQPLPFDLL--YWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDI--TCPVYNLAAEEDHIAPWSSVYL 351 (445)
T ss_pred CCCCCchhHH--HhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhc--ccceEEEeecccccCCHHHHHH
Confidence 1112221111 1111111111122222222111100 0 000012234556 9999999999999999998888
Q ss_pred HHhccCC-ceEEEeCCcccCCCCC-hHH--------HHHHHHHHHHhhc
Q 023416 240 LKGAKGV-TKFVEVPGALLPQEEY-PAM--------VAQELYQFLQQTF 278 (282)
Q Consensus 240 ~~~~~~~-~~~~~~~~~H~~~~e~-p~~--------~~~~i~~fl~~~~ 278 (282)
..+..++ ++++..+.||....-+ |.. ....+..|+.+..
T Consensus 352 g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 352 GARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred HHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 8887776 6677777779743322 111 2335667776543
No 104
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.86 E-value=1.7e-07 Score=68.43 Aligned_cols=243 Identities=8% Similarity=0.002 Sum_probs=138.6
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCC---C------CCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD---R------PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~---~------~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
....|.+++..|-++..+ ..+|+.+-..||-.-. + ....+++++.++.-.+|++..... +.+++++
T Consensus 41 ~~gFY~~F~~~L~~~l~~-r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk----~~ki~ii 115 (301)
T KOG3975|consen 41 LLGFYTEFARHLHLNLID-RLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPK----DRKIYII 115 (301)
T ss_pred chhHHHHHHHHHHHhccc-ccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCC----CCEEEEE
Confidence 456677888888765210 1569999888886543 1 115689999999999999876543 8899999
Q ss_pred cccHHHHHHHHHHH--hCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCc-chhhhHHhhhhhcHHHHHH
Q 023416 81 GGGHAATLTVRAAK--KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP-GVGWMMYNMLVSNEKAIQS 157 (282)
Q Consensus 81 G~s~G~~~a~~~~~--~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 157 (282)
|||.|+.+.++... +-...|.+.+++-|+... + ..++......+.+..+...- ..+...+. -.+..++.
T Consensus 116 GHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIer-M----~eSpnG~~~t~~l~~~~hv~~lt~yi~~~---~lp~~ir~ 187 (301)
T KOG3975|consen 116 GHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIER-M----HESPNGIRLTKVLRYLPHVVSLTSYIYWI---LLPGFIRF 187 (301)
T ss_pred ecchhHHHHHHHhhhcccccceEEEEEecchHHH-H----hcCCCceEeeeeeeeehhhhheeeeeeee---cChHHHHH
Confidence 99999999999876 223457788888775311 0 00000000001000000000 00111112 23555555
Q ss_pred HHhhccccCCCCCChHHHHHHHHHHhhc---CCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCH
Q 023416 158 QYKSHVYSNPDNVTPGIVESRYALTKRK---GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 234 (282)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~ 234 (282)
++.+..+. ....+++............ ........-+... .....+..++- .+-+.+.+|..|.++|.
T Consensus 188 ~Li~~~l~-~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV------~~~d~e~~een--~d~l~Fyygt~DgW~p~ 258 (301)
T KOG3975|consen 188 ILIKFMLC-GSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEV------TTRDIEYCEEN--LDSLWFYYGTNDGWVPS 258 (301)
T ss_pred HHHHHhcc-cCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHH------HHhHHHHHHhc--CcEEEEEccCCCCCcch
Confidence 55444332 2234444443322221111 0000000000000 00123344443 57789999999999999
Q ss_pred HHHHHHHhccCCceEEEe-CCc-ccCCCCChHHHHHHHHHHH
Q 023416 235 AEMEALKGAKGVTKFVEV-PGA-LLPQEEYPAMVAQELYQFL 274 (282)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~-H~~~~e~p~~~~~~i~~fl 274 (282)
+..+.+++..|..++..= +++ |..-..+.+..+..+.+.+
T Consensus 259 ~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 259 HYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 999999998887665432 567 9998888888888887765
No 105
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.84 E-value=5.4e-07 Score=70.96 Aligned_cols=63 Identities=16% Similarity=0.106 Sum_probs=43.3
Q ss_pred HHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccC-CceEEEeCCc-ccCCCCChHHH-HHHHHHHHHh
Q 023416 208 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMV-AQELYQFLQQ 276 (282)
Q Consensus 208 ~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~p~~~-~~~i~~fl~~ 276 (282)
.....+.| +||+++-.|-.|.++|+...-...+.++ ..++.+++.+ |... .++ .+...+||.+
T Consensus 254 ~~nfA~ri--~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 254 AVNFARRI--KCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG----PEFQEDKQLNFLKE 319 (320)
T ss_dssp HHHHGGG----SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT----HHHHHHHHHHHHHH
T ss_pred HHHHHHHc--CCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch----hhHHHHHHHHHHhc
Confidence 55666777 9999999999999999998887776654 4678999998 7643 344 6677777765
No 106
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.78 E-value=2.1e-07 Score=72.28 Aligned_cols=58 Identities=10% Similarity=0.137 Sum_probs=50.1
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCccc-CCCCChHHHHHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALL-PQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~e~p~~~~~~i~~fl~ 275 (282)
.-.+.++.+++|.++|......+.+..|++++..++|||. ..+-+.+.|.++|.+-++
T Consensus 289 p~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 289 PSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCcEEEEEecCceEechhhcchHHHhCCCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 4567899999999999988889999999999999999987 566677889999887664
No 107
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.78 E-value=3.5e-07 Score=68.94 Aligned_cols=165 Identities=15% Similarity=0.114 Sum_probs=111.0
Q ss_pred chHHHHHHHHHhhcCCCeEEEEecCCCC-CCCCC-CC-----C-----CCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 13 EWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDR-PK-----M-----DYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 13 ~w~~~~~~L~~~~~~~g~~vi~~D~~G~-G~S~~-~~-----~-----~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
..+.+.+.|++. ||.|++||+-+. |.+.. .. . ..+......|+.+.++.+.........++.++
T Consensus 42 ~i~~~a~rlA~~----Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~ 117 (236)
T COG0412 42 HIRDVARRLAKA----GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVV 117 (236)
T ss_pred HHHHHHHHHHhC----CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEE
Confidence 667888999998 999999999873 43322 11 1 12336777788888777652211125679999
Q ss_pred cccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 81 GGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
|.||||.+++.++.+.| .+++.+..-+... . ..
T Consensus 118 GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~------------------------~-------------~~--------- 150 (236)
T COG0412 118 GFCMGGGLALLAATRAP-EVKAAVAFYGGLI------------------------A-------------DD--------- 150 (236)
T ss_pred EEcccHHHHHHhhcccC-CccEEEEecCCCC------------------------C-------------Cc---------
Confidence 99999999999998876 5666555433110 0 00
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 240 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~ 240 (282)
. . ...++ ++|+++.+|+.|..++....+.+
T Consensus 151 ---~-----~----------------------------------------~~~~~--~~pvl~~~~~~D~~~p~~~~~~~ 180 (236)
T COG0412 151 ---T-----A----------------------------------------DAPKI--KVPVLLHLAGEDPYIPAADVDAL 180 (236)
T ss_pred ---c-----c----------------------------------------ccccc--cCcEEEEecccCCCCChhHHHHH
Confidence 0 0 01123 89999999999999998877766
Q ss_pred Hhcc----CCceEEEeCCc-ccCCCCC-----------hHHHHHHHHHHHHhhc
Q 023416 241 KGAK----GVTKFVEVPGA-LLPQEEY-----------PAMVAQELYQFLQQTF 278 (282)
Q Consensus 241 ~~~~----~~~~~~~~~~~-H~~~~e~-----------p~~~~~~i~~fl~~~~ 278 (282)
.+.. ...++++++++ |..+.+. .+.-.+.+.+|+.+..
T Consensus 181 ~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 181 AAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred HHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 5432 25678999999 9877542 1345677788887754
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.76 E-value=8.4e-07 Score=68.87 Aligned_cols=84 Identities=15% Similarity=0.039 Sum_probs=55.3
Q ss_pred HHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcc
Q 023416 21 IVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKP 100 (282)
Q Consensus 21 L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v 100 (282)
++++ ||.|+..|.||.|.|+...... ...-++|..+.|+-+..... -..+|-++|.|.+|..++..|...|..+
T Consensus 53 ~~~~----GY~vV~~D~RG~g~S~G~~~~~-~~~e~~D~~d~I~W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~~~p~L 126 (272)
T PF02129_consen 53 FAER----GYAVVVQDVRGTGGSEGEFDPM-SPNEAQDGYDTIEWIAAQPW-SNGKVGMYGISYGGFTQWAAAARRPPHL 126 (272)
T ss_dssp HHHT----T-EEEEEE-TTSTTS-S-B-TT-SHHHHHHHHHHHHHHHHCTT-EEEEEEEEEETHHHHHHHHHHTTT-TTE
T ss_pred HHhC----CCEEEEECCcccccCCCccccC-ChhHHHHHHHHHHHHHhCCC-CCCeEEeeccCHHHHHHHHHHhcCCCCc
Confidence 7787 9999999999999998743221 33344554444443321100 0457999999999999999999888889
Q ss_pred cceeeecCCC
Q 023416 101 TAIAAVAPTW 110 (282)
Q Consensus 101 ~~lvl~~p~~ 110 (282)
++++...+..
T Consensus 127 kAi~p~~~~~ 136 (272)
T PF02129_consen 127 KAIVPQSGWS 136 (272)
T ss_dssp EEEEEESE-S
T ss_pred eEEEecccCC
Confidence 9988887643
No 109
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.76 E-value=1.1e-06 Score=68.47 Aligned_cols=59 Identities=22% Similarity=0.343 Sum_probs=41.4
Q ss_pred CccEEEEecCCCCCCCHHHHHHHH----hcc-CCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhcC
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALK----GAK-GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 279 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~----~~~-~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~~ 279 (282)
++|++|.+|..|.++|....+.+. +.. .++++..++++ |....-. -......||.++++
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFA 283 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHC
Confidence 799999999999999987776554 445 46788888888 9853211 11344577776653
No 110
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.73 E-value=1.6e-07 Score=70.01 Aligned_cols=84 Identities=17% Similarity=0.167 Sum_probs=51.8
Q ss_pred HHHHHHHHH-hhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCC--C-cCCCCceEEEcccHHHHHHH
Q 023416 15 RLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP--V-SSSESDLVIFGGGHAATLTV 90 (282)
Q Consensus 15 ~~~~~~L~~-~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~--~-~~~~~~~~l~G~s~G~~~a~ 90 (282)
..+...++. . |+.|+.+|+|=. |. .++.+..+|+.+.++.+... . ..-..+++++|+|.||.+++
T Consensus 18 ~~~~~~la~~~----g~~v~~~~Yrl~-----p~--~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~ 86 (211)
T PF07859_consen 18 WPFAARLAAER----GFVVVSIDYRLA-----PE--APFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLAL 86 (211)
T ss_dssp HHHHHHHHHHH----TSEEEEEE---T-----TT--SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHhhc----cEEEEEeecccc-----cc--ccccccccccccceeeeccccccccccccceEEeecccccchhh
Confidence 456666765 5 899999999932 22 23344455544444332211 0 00156899999999999999
Q ss_pred HHHHhC----CCcccceeeecCC
Q 023416 91 RAAKKN----LVKPTAIAAVAPT 109 (282)
Q Consensus 91 ~~~~~~----~~~v~~lvl~~p~ 109 (282)
.++.+. ...++++++++|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 87 SLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HHHHHHHHTTTCHESEEEEESCH
T ss_pred hhhhhhhhhcccchhhhhccccc
Confidence 988732 2348899999883
No 111
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.70 E-value=5.4e-06 Score=68.87 Aligned_cols=80 Identities=19% Similarity=0.213 Sum_probs=56.7
Q ss_pred eEEEEecCC-CCCCCCCCC--CCCchHHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHHHHHHHHhC---------
Q 023416 30 WRATIVDWP-GLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATLTVRAAKKN--------- 96 (282)
Q Consensus 30 ~~vi~~D~~-G~G~S~~~~--~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~a~~~~~~~--------- 96 (282)
..++.+|.| |+|.|.... ...+.++.++|+.++++.+-..... ...+++|+|+|+||.++..++.+-
T Consensus 122 ~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~ 201 (462)
T PTZ00472 122 AYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDG 201 (462)
T ss_pred cCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCC
Confidence 789999975 888886432 3445678888988888754321111 268999999999999998887631
Q ss_pred -CCcccceeeecCC
Q 023416 97 -LVKPTAIAAVAPT 109 (282)
Q Consensus 97 -~~~v~~lvl~~p~ 109 (282)
...++++++-++.
T Consensus 202 ~~inLkGi~IGNg~ 215 (462)
T PTZ00472 202 LYINLAGLAVGNGL 215 (462)
T ss_pred ceeeeEEEEEeccc
Confidence 2456788877764
No 112
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.69 E-value=2.5e-06 Score=58.08 Aligned_cols=167 Identities=13% Similarity=0.166 Sum_probs=111.5
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCC-----CCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEccc
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-----GYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGG 83 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~-----G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s 83 (282)
.+.....++..|+.. |+.|..++++-. |.-.+|+ ...-...+...+.++.+.+. ..++++-|+|
T Consensus 28 dSt~m~~~a~~la~~----G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~------~gpLi~GGkS 97 (213)
T COG3571 28 DSTSMTAVAAALARR----GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLA------EGPLIIGGKS 97 (213)
T ss_pred CCHHHHHHHHHHHhC----ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhccc------CCceeecccc
Confidence 345567788899988 999999998754 3222232 22334567777888888876 6799999999
Q ss_pred HHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhcc
Q 023416 84 HAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHV 163 (282)
Q Consensus 84 ~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (282)
|||.++...+......|+.+++++-+... | ..++..
T Consensus 98 mGGR~aSmvade~~A~i~~L~clgYPfhp-------------------------p-----------GKPe~~-------- 133 (213)
T COG3571 98 MGGRVASMVADELQAPIDGLVCLGYPFHP-------------------------P-----------GKPEQL-------- 133 (213)
T ss_pred ccchHHHHHHHhhcCCcceEEEecCccCC-------------------------C-----------CCcccc--------
Confidence 99999999998665568888877532100 0 001000
Q ss_pred ccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhc
Q 023416 164 YSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGA 243 (282)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~ 243 (282)
..+.+..+ ++|++|.+|+.|.+-..+....+. .
T Consensus 134 --------------------------------------------Rt~HL~gl--~tPtli~qGtrD~fGtr~~Va~y~-l 166 (213)
T COG3571 134 --------------------------------------------RTEHLTGL--KTPTLITQGTRDEFGTRDEVAGYA-L 166 (213)
T ss_pred --------------------------------------------hhhhccCC--CCCeEEeecccccccCHHHHHhhh-c
Confidence 12334455 899999999999998876653332 2
Q ss_pred cCCceEEEeCCc-ccCC----------CCChHHHHHHHHHHHHhh
Q 023416 244 KGVTKFVEVPGA-LLPQ----------EEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 244 ~~~~~~~~~~~~-H~~~----------~e~p~~~~~~i~~fl~~~ 277 (282)
.+..+++.++++ |-+- .++-...++.|..|....
T Consensus 167 s~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 167 SDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred CCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 345789999999 9642 223345667777777653
No 113
>PRK10115 protease 2; Provisional
Probab=98.69 E-value=1.2e-06 Score=76.31 Aligned_cols=95 Identities=16% Similarity=0.080 Sum_probs=70.8
Q ss_pred CcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCC--------CCCCCchHHHHHHHHHHhhCCCCCCcCCCCceE
Q 023416 7 DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR--------PKMDYNADVMEKFVVDLINAPDSPVSSSESDLV 78 (282)
Q Consensus 7 ~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~--------~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 78 (282)
..+..-.|......|.++ ||.|..++.||-|.=.. ....-+++|+++.+..+++.=-.. ..++.
T Consensus 456 ~~~~~p~f~~~~~~l~~r----G~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d----~~rl~ 527 (686)
T PRK10115 456 GASIDADFSFSRLSLLDR----GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGS----PSLCY 527 (686)
T ss_pred CCCCCCCccHHHHHHHHC----CcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC----hHHeE
Confidence 344445577777788888 99999999999543221 113356777777777776542221 56899
Q ss_pred EEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 79 IFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
++|+|.||+++......+|++++++|...|.
T Consensus 528 i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 528 GMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred EEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 9999999999999999899999999998774
No 114
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.68 E-value=8e-08 Score=68.03 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=59.4
Q ss_pred HHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 16 LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 16 ~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
.+++.|+++ |+.|+.+|-+=|=.+.+ |.++.+.|+..+++.....-. ..+++|+|.|+|+-+.-....+
T Consensus 20 ~~a~~l~~~----G~~VvGvdsl~Yfw~~r-----tP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nr 88 (192)
T PF06057_consen 20 QIAEALAKQ----GVPVVGVDSLRYFWSER-----TPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNR 88 (192)
T ss_pred HHHHHHHHC----CCeEEEechHHHHhhhC-----CHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhh
Confidence 356677776 99999999887777654 446667777777765432111 7889999999999776655443
Q ss_pred ----CCCcccceeeecCC
Q 023416 96 ----NLVKPTAIAAVAPT 109 (282)
Q Consensus 96 ----~~~~v~~lvl~~p~ 109 (282)
...+|..++|++|.
T Consensus 89 Lp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 89 LPAALRARVAQVVLLSPS 106 (192)
T ss_pred CCHHHHhheeEEEEeccC
Confidence 33568899999874
No 115
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.68 E-value=3.9e-07 Score=68.14 Aligned_cols=56 Identities=23% Similarity=0.325 Sum_probs=39.2
Q ss_pred CccEEEEecCCCCCCCHHHHHHHH----hccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
++|+++++|++|+++|.+.++... +...+++++.++++ |.+. .+..+.+.+||.++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 579999999999999987776554 34456889999977 9874 45667788888764
No 116
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.61 E-value=2.4e-06 Score=59.37 Aligned_cols=135 Identities=18% Similarity=0.104 Sum_probs=90.6
Q ss_pred CCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhh
Q 023416 49 DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRY 128 (282)
Q Consensus 49 ~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 128 (282)
.-..++|++.+...+.... .+++||+||+|+..+++++......|.+..|++|+-.
T Consensus 40 ~P~~~dWi~~l~~~v~a~~-------~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~----------------- 95 (181)
T COG3545 40 APVLDDWIARLEKEVNAAE-------GPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDV----------------- 95 (181)
T ss_pred CCCHHHHHHHHHHHHhccC-------CCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCc-----------------
Confidence 4577899999988888873 5699999999999999999876668999999998521
Q ss_pred hhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHH
Q 023416 129 GLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEF 208 (282)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (282)
. ++..... ....+. +.. .
T Consensus 96 -------~--------------~~~~~~~--~~~tf~-------------------~~p--------------------~ 113 (181)
T COG3545 96 -------S--------------RPEIRPK--HLMTFD-------------------PIP--------------------R 113 (181)
T ss_pred -------c--------------ccccchh--hccccC-------------------CCc--------------------c
Confidence 0 0000000 000000 000 0
Q ss_pred HHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc-ccCCC---CChHHHHHHHHHHHHh
Q 023416 209 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQE---EYPAMVAQELYQFLQQ 276 (282)
Q Consensus 209 ~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~---e~p~~~~~~i~~fl~~ 276 (282)
..+ .-|.+++..++|++++.+.++.+.+..+.. ++.+..+ |..-. ..-.+....+.+|+.+
T Consensus 114 ----~~l--pfps~vvaSrnDp~~~~~~a~~~a~~wgs~-lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 114 ----EPL--PFPSVVVASRNDPYVSYEHAEDLANAWGSA-LVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred ----ccC--CCceeEEEecCCCCCCHHHHHHHHHhccHh-heecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 011 569999999999999999999999988654 5666665 97432 2334455666666654
No 117
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.55 E-value=2.2e-06 Score=64.71 Aligned_cols=89 Identities=15% Similarity=0.128 Sum_probs=72.6
Q ss_pred ccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHH
Q 023416 9 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATL 88 (282)
Q Consensus 9 ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~ 88 (282)
.....|..+...|... ..|+.++.||+|.-.. ..-+++++++...+.|..... ..+++|.|+|+||.+
T Consensus 11 G~~~~~~~L~~~l~~~-----~~v~~l~a~g~~~~~~--~~~~l~~~a~~yv~~Ir~~QP-----~GPy~L~G~S~GG~v 78 (257)
T COG3319 11 GSVLAYAPLAAALGPL-----LPVYGLQAPGYGAGEQ--PFASLDDMAAAYVAAIRRVQP-----EGPYVLLGWSLGGAV 78 (257)
T ss_pred CcHHHHHHHHHHhccC-----ceeeccccCccccccc--ccCCHHHHHHHHHHHHHHhCC-----CCCEEEEeeccccHH
Confidence 3455678888899988 9999999999986333 345889999998888888874 569999999999999
Q ss_pred HHHHHHh---CCCcccceeeecCC
Q 023416 89 TVRAAKK---NLVKPTAIAAVAPT 109 (282)
Q Consensus 89 a~~~~~~---~~~~v~~lvl~~p~ 109 (282)
|...|.+ ..+.|..++++++.
T Consensus 79 A~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 79 AFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred HHHHHHHHHhCCCeEEEEEEeccC
Confidence 9999873 34568899999874
No 118
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.53 E-value=1.3e-06 Score=64.80 Aligned_cols=189 Identities=21% Similarity=0.237 Sum_probs=105.1
Q ss_pred CeEEEEecCCCCCCCCC----CC-----------------CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHH
Q 023416 29 NWRATIVDWPGLGYSDR----PK-----------------MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAAT 87 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~----~~-----------------~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~ 87 (282)
||.|+++|.||.|.|+. +. ..|-+.....|+...++.+..-.......+.+.|+|.||.
T Consensus 109 Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGg 188 (321)
T COG3458 109 GYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGG 188 (321)
T ss_pred ceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCch
Confidence 79999999999998832 11 1122223344555555444321111256788999999999
Q ss_pred HHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHhhccccCC
Q 023416 88 LTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNP 167 (282)
Q Consensus 88 ~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (282)
+++..+...| ++++++..-|... .++. + ...+.. ..-..+..+++.. ++
T Consensus 189 lalaaaal~~-rik~~~~~~Pfl~-df~r-------------~----i~~~~~---------~~ydei~~y~k~h---~~ 237 (321)
T COG3458 189 LALAAAALDP-RIKAVVADYPFLS-DFPR-------------A----IELATE---------GPYDEIQTYFKRH---DP 237 (321)
T ss_pred hhhhhhhcCh-hhhcccccccccc-cchh-------------h----eeeccc---------CcHHHHHHHHHhc---Cc
Confidence 9998887433 4778887766421 1111 0 110000 0111222222211 00
Q ss_pred CCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCCc
Q 023416 168 DNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVT 247 (282)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 247 (282)
. ++.+ + ..+ .++ ++.....++ ++|+|+..|--|+++|+...-...+..+..
T Consensus 238 ~---e~~v--~--------------~TL-~yf-------D~~n~A~Ri--K~pvL~svgL~D~vcpPstqFA~yN~l~~~ 288 (321)
T COG3458 238 K---EAEV--F--------------ETL-SYF-------DIVNLAARI--KVPVLMSVGLMDPVCPPSTQFAAYNALTTS 288 (321)
T ss_pred h---HHHH--H--------------HHH-hhh-------hhhhHHHhh--ccceEEeecccCCCCCChhhHHHhhcccCC
Confidence 0 1000 0 000 111 145555667 999999999999999998887777766554
Q ss_pred -eEEEeCCcccCCCCChHHHHHHHHHHHHhhcC
Q 023416 248 -KFVEVPGALLPQEEYPAMVAQELYQFLQQTFE 279 (282)
Q Consensus 248 -~~~~~~~~H~~~~e~p~~~~~~i~~fl~~~~~ 279 (282)
++.+++-- -|++-|.-..+.+..|+...+.
T Consensus 289 K~i~iy~~~--aHe~~p~~~~~~~~~~l~~l~~ 319 (321)
T COG3458 289 KTIEIYPYF--AHEGGPGFQSRQQVHFLKILFG 319 (321)
T ss_pred ceEEEeecc--ccccCcchhHHHHHHHHHhhcc
Confidence 35555553 1445566666677778776543
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.52 E-value=3.2e-06 Score=64.05 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=64.6
Q ss_pred CCCcccCcccccchHHHHHHHH-HhhcCCCeEE--EEecCCCC----CC----CCCCC------CC--CchHHHHHHHHH
Q 023416 1 MIPTISDVSTVEEWRLVAQDIV-QRVGKVNWRA--TIVDWPGL----GY----SDRPK------MD--YNADVMEKFVVD 61 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~-~~~~~~g~~v--i~~D~~G~----G~----S~~~~------~~--~~~~~~~~~l~~ 61 (282)
|+||++ ++...+..++..+. +.+. ...+ +-++--|+ |. ...|- .. -+....+..+..
T Consensus 16 fihG~~--gt~~s~~~mi~~~~~~~~~--~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~~ 91 (255)
T PF06028_consen 16 FIHGYG--GTANSFNHMINRLENKQGV--AQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLKK 91 (255)
T ss_dssp EE--TT--GGCCCCHHHHHHHHHCSTS---S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHHH
T ss_pred EECCCC--CChhHHHHHHHHHHhhcCC--CceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHHH
Confidence 578887 56788899999998 5421 2233 34444443 22 11121 12 357778888888
Q ss_pred HhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCC-----CcccceeeecCCC
Q 023416 62 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL-----VKPTAIAAVAPTW 110 (282)
Q Consensus 62 ~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~-----~~v~~lvl~~p~~ 110 (282)
++..|...+. -..+.++||||||..++.|...+. -.+.++|.|+.+.
T Consensus 92 vl~~L~~~Y~--~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 92 VLKYLKKKYH--FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHhcC--CCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 8877764444 678999999999999999987532 2589999997654
No 120
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.51 E-value=8.2e-07 Score=66.06 Aligned_cols=88 Identities=17% Similarity=0.259 Sum_probs=67.3
Q ss_pred ccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHH
Q 023416 9 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATL 88 (282)
Q Consensus 9 ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~ 88 (282)
++...|..+...|... +.|+++|++|+|.+... ..+.+.+++.+.+.+..... ..+++++|||+||.+
T Consensus 10 ~~~~~~~~~~~~l~~~-----~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~-----~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 10 SGPHEYARLAAALRGR-----RDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAG-----GRPFVLVGHSSGGLL 77 (212)
T ss_pred CcHHHHHHHHHhcCCC-----ccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcC-----CCCeEEEEECHHHHH
Confidence 5667899999999876 99999999999976553 34667777766555543321 568999999999999
Q ss_pred HHHHHHh---CCCcccceeeecC
Q 023416 89 TVRAAKK---NLVKPTAIAAVAP 108 (282)
Q Consensus 89 a~~~~~~---~~~~v~~lvl~~p 108 (282)
+...+.+ .+..+.+++++++
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEcc
Confidence 9888774 4566888888865
No 121
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.50 E-value=3.2e-07 Score=68.80 Aligned_cols=103 Identities=11% Similarity=0.118 Sum_probs=64.6
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcC-CCCceEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS-SESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l 79 (282)
|++|+....++ |..++++++.+ ||-|+++|+...+........-...+..+.+.+=++........ --.++.|
T Consensus 22 f~~G~~~~~s~--Ys~ll~hvASh----GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 22 FLHGFLLINSW--YSQLLEHVASH----GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred EeCCcCCCHHH--HHHHHHHHHhC----ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 46777743333 88999999999 99999999766443211111112222222222211111000000 1347899
Q ss_pred EcccHHHHHHHHHHHhC-----CCcccceeeecCC
Q 023416 80 FGGGHAATLTVRAAKKN-----LVKPTAIAAVAPT 109 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~-----~~~v~~lvl~~p~ 109 (282)
+|||-||.+|...+..+ ..+++++++++|.
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 99999999999988866 5689999999996
No 122
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.49 E-value=1.3e-05 Score=63.17 Aligned_cols=94 Identities=10% Similarity=0.010 Sum_probs=64.8
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhC-CCCCCcCCCCceEEEcccHHHHH
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA-PDSPVSSSESDLVIFGGGHAATL 88 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~-l~~~~~~~~~~~~l~G~s~G~~~ 88 (282)
.+..|..+...++.. .+.-|+.+|+|=-=+. +..-.++|-.+.+.-+.++ +..... --..++|+|-|.||.+
T Consensus 107 ~~~~y~~~~~~~a~~---~~~vvvSVdYRLAPEh---~~Pa~y~D~~~Al~w~~~~~~~~~~~-D~~rv~l~GDSaGGNi 179 (336)
T KOG1515|consen 107 NSPAYDSFCTRLAAE---LNCVVVSVDYRLAPEH---PFPAAYDDGWAALKWVLKNSWLKLGA-DPSRVFLAGDSAGGNI 179 (336)
T ss_pred CCchhHHHHHHHHHH---cCeEEEecCcccCCCC---CCCccchHHHHHHHHHHHhHHHHhCC-CcccEEEEccCccHHH
Confidence 577788888888776 3689999999832221 2334556666666666664 211100 1345999999999999
Q ss_pred HHHHHHh------CCCcccceeeecCCC
Q 023416 89 TVRAAKK------NLVKPTAIAAVAPTW 110 (282)
Q Consensus 89 a~~~~~~------~~~~v~~lvl~~p~~ 110 (282)
|...+.+ .+.++.+.|++-|..
T Consensus 180 a~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 180 AHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred HHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 9998873 246789999999864
No 123
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.45 E-value=1e-06 Score=65.90 Aligned_cols=104 Identities=8% Similarity=0.054 Sum_probs=63.0
Q ss_pred CCCcccCcccccchHHHHHHHHHh----hcCCCeEEEEecCCCCCCCCCCCCCCchHHHHH----HHHHHhhCCCCCCcC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQR----VGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK----FVVDLINAPDSPVSS 72 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~----~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~----~l~~~i~~l~~~~~~ 72 (282)
++||.. ++...|+.+...+.+. .....++++++|+......-. ...+.+..+ .+..+++... ....
T Consensus 9 FIhG~~--Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~---g~~l~~q~~~~~~~i~~i~~~~~-~~~~ 82 (225)
T PF07819_consen 9 FIHGNA--GSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH---GRTLQRQAEFLAEAIKYILELYK-SNRP 82 (225)
T ss_pred EECcCC--CCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc---cccHHHHHHHHHHHHHHHHHhhh-hccC
Confidence 578854 5677888877776321 011248899999877542221 122223233 3333334331 0011
Q ss_pred CCCceEEEcccHHHHHHHHHHHhC---CCcccceeeecCCC
Q 023416 73 SESDLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTW 110 (282)
Q Consensus 73 ~~~~~~l~G~s~G~~~a~~~~~~~---~~~v~~lvl~~p~~ 110 (282)
...+++++||||||.+|..+.... +..|+.+|.++.+.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 278999999999999999887643 35789999988653
No 124
>COG0400 Predicted esterase [General function prediction only]
Probab=98.39 E-value=4.8e-06 Score=60.95 Aligned_cols=119 Identities=14% Similarity=0.087 Sum_probs=82.3
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhh
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 134 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (282)
+++.+++..++.+++ ..+++++|+|-|+.+++....++|..++++++++|....
T Consensus 83 ~~~~l~~~~~~~gi~----~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~---------------------- 136 (207)
T COG0400 83 LAEFLEELAEEYGID----SSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPL---------------------- 136 (207)
T ss_pred HHHHHHHHHHHhCCC----hhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCC----------------------
Confidence 344444444555543 578999999999999999999999999999998874210
Q ss_pred hcCcchhhhHHhhhhhcHHHHHHHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhc
Q 023416 135 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 214 (282)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (282)
... . . ..++
T Consensus 137 ----------------~~~------~---~---------------------------------------------~~~~- 145 (207)
T COG0400 137 ----------------EPE------L---L---------------------------------------------PDLA- 145 (207)
T ss_pred ----------------CCc------c---c---------------------------------------------cccC-
Confidence 000 0 0 0000
Q ss_pred ccCCccEEEEecCCCCCCCHHHHHHHHh----ccCCceEEEeCCcccCCCCChHHHHHHHHHHHHhh
Q 023416 215 LEGKLPLLVVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 215 i~~~~P~lii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
..|+++++|+.|+++|...+.++++ ..-+++...+++||.+..| -.+.+.+|+.+.
T Consensus 146 ---~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~e----~~~~~~~wl~~~ 205 (207)
T COG0400 146 ---GTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPE----ELEAARSWLANT 205 (207)
T ss_pred ---CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCHH----HHHHHHHHHHhc
Confidence 6799999999999999987776654 3456778888877987654 444555577653
No 125
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.36 E-value=2.6e-05 Score=61.90 Aligned_cols=85 Identities=12% Similarity=0.012 Sum_probs=53.1
Q ss_pred HHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhC---CCCCCcCCCCceEEEcccHHHHHHHHH
Q 023416 16 LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA---PDSPVSSSESDLVIFGGGHAATLTVRA 92 (282)
Q Consensus 16 ~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~---l~~~~~~~~~~~~l~G~s~G~~~a~~~ 92 (282)
.....+... .|+.|+.+|+|=--+-. ....+++..+.+..+.++ ++.+ ...++++|+|.||.+++.+
T Consensus 100 ~~~~~~~~~---~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l~~~~~~~g~d----p~~i~v~GdSAGG~La~~~ 169 (312)
T COG0657 100 ALVARLAAA---AGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWLRANAAELGID----PSRIAVAGDSAGGHLALAL 169 (312)
T ss_pred HHHHHHHHH---cCCEEEecCCCCCCCCC---CCchHHHHHHHHHHHHhhhHhhCCC----ccceEEEecCcccHHHHHH
Confidence 444444443 38999999998543322 223444433333333333 3332 5679999999999999998
Q ss_pred HHhCC----CcccceeeecCCC
Q 023416 93 AKKNL----VKPTAIAAVAPTW 110 (282)
Q Consensus 93 ~~~~~----~~v~~lvl~~p~~ 110 (282)
+..-. ......+++.|..
T Consensus 170 a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 170 ALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred HHHHHhcCCCCceEEEEEeccc
Confidence 87422 2467788888753
No 126
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.32 E-value=4e-06 Score=67.43 Aligned_cols=102 Identities=16% Similarity=0.175 Sum_probs=69.1
Q ss_pred CCCcccCcccccchH------HHHHHHHHhhcCCCeEEEEecCCCCCCCCC-----C--C---CCCchHHHHH-HHHHHh
Q 023416 1 MIPTISDVSTVEEWR------LVAQDIVQRVGKVNWRATIVDWPGLGYSDR-----P--K---MDYNADVMEK-FVVDLI 63 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~------~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~-----~--~---~~~~~~~~~~-~l~~~i 63 (282)
|.+||.. |+..|- .++=.|++. ||+|..-..||--.|.+ + . -++|+.+++. ||-+.|
T Consensus 78 l~HGLl~--sS~~Wv~n~p~~sLaf~Lada----GYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~I 151 (403)
T KOG2624|consen 78 LQHGLLA--SSSSWVLNGPEQSLAFLLADA----GYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMI 151 (403)
T ss_pred Eeecccc--ccccceecCccccHHHHHHHc----CCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHH
Confidence 3566653 445552 344456776 99999999999766643 1 1 2456666554 566666
Q ss_pred hCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCC---cccceeeecCCC
Q 023416 64 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTW 110 (282)
Q Consensus 64 ~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~---~v~~lvl~~p~~ 110 (282)
+.+..... ..+++.+|||.|+..........|+ +|+.+++++|..
T Consensus 152 dyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 152 DYILEKTG--QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHhcc--ccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 54432111 6789999999999999888775544 689999999964
No 127
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.26 E-value=1e-05 Score=60.16 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=37.9
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCC
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~ 110 (282)
+.+...+++.....- -..++.|+|.|.||.+|+.++..+| .|+.+|.++|..
T Consensus 5 yfe~Ai~~L~~~p~v---~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEV---DPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHCSTTB-----SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHHHhCCCC---CCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 445555666555310 1478999999999999999999988 799999998853
No 128
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.18 E-value=3.6e-06 Score=64.65 Aligned_cols=75 Identities=17% Similarity=0.128 Sum_probs=57.0
Q ss_pred CeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHH-hhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeec
Q 023416 29 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL-INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~-i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~ 107 (282)
||.|....+|||+.|...+.......-++.+.+| |..++-+ .+.+++.|+|+||.-+..+|..+|+ |+++||-+
T Consensus 268 gYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~----~edIilygWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 268 GYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFR----QEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred CceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCC----ccceEEEEeecCCchHHHHhhcCCC-ceEEEeec
Confidence 7999999999999998754444444445555554 4455533 6789999999999999999999998 78888755
Q ss_pred C
Q 023416 108 P 108 (282)
Q Consensus 108 p 108 (282)
.
T Consensus 343 t 343 (517)
T KOG1553|consen 343 T 343 (517)
T ss_pred c
Confidence 4
No 129
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.17 E-value=4.2e-05 Score=67.36 Aligned_cols=190 Identities=16% Similarity=0.141 Sum_probs=113.0
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC------C--CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEc
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP------K--MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFG 81 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~------~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G 81 (282)
..-.|..+ ..+.. |+-|+.+|.||-|..... . .....++....+..+++..-.+ ..++.++|
T Consensus 545 ~~~~~~~~--~~s~~----g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD----~~ri~i~G 614 (755)
T KOG2100|consen 545 FSVDWNEV--VVSSR----GFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFID----RSRVAIWG 614 (755)
T ss_pred EEecHHHH--hhccC----CeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhccccc----HHHeEEec
Confidence 34455543 33444 899999999998765432 1 3456667777777777665433 56899999
Q ss_pred ccHHHHHHHHHHHhCCCcccce-eeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHHHHHh
Q 023416 82 GGHAATLTVRAAKKNLVKPTAI-AAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 160 (282)
Q Consensus 82 ~s~G~~~a~~~~~~~~~~v~~l-vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
+|.||.+++......+..+-+. +.++|...- .++. .....+++.
T Consensus 615 wSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~------------------------------~~yd-----s~~terymg 659 (755)
T KOG2100|consen 615 WSYGGYLTLKLLESDPGDVFKCGVAVAPVTDW------------------------------LYYD-----STYTERYMG 659 (755)
T ss_pred cChHHHHHHHHhhhCcCceEEEEEEecceeee------------------------------eeec-----ccccHhhcC
Confidence 9999999999999888665555 777774210 0000 000000000
Q ss_pred hccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCcc-EEEEecCCCCCCCHHHHHH
Q 023416 161 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLP-LLVVSTEGSPRRSKAEMEA 239 (282)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P-~lii~G~~D~~~~~~~~~~ 239 (282)
.+.+....+.... ....+..+ +.| .|++||+.|..+..+....
T Consensus 660 ---------~p~~~~~~y~e~~-------------------------~~~~~~~~--~~~~~LliHGt~DdnVh~q~s~~ 703 (755)
T KOG2100|consen 660 ---------LPSENDKGYEESS-------------------------VSSPANNI--KTPKLLLIHGTEDDNVHFQQSAI 703 (755)
T ss_pred ---------CCccccchhhhcc-------------------------ccchhhhh--ccCCEEEEEcCCcCCcCHHHHHH
Confidence 0000000000000 11112223 344 4999999998887665544
Q ss_pred H----HhccCCceEEEeCCc-ccCCCCCh-HHHHHHHHHHHHhhcCC
Q 023416 240 L----KGAKGVTKFVEVPGA-LLPQEEYP-AMVAQELYQFLQQTFEP 280 (282)
Q Consensus 240 ~----~~~~~~~~~~~~~~~-H~~~~e~p-~~~~~~i~~fl~~~~~~ 280 (282)
+ +...-..++.++|+. |.+-.-.. ..+...+..|+..+...
T Consensus 704 ~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 704 LIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred HHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 4 333223789999999 99776543 66788888998887654
No 130
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.15 E-value=6e-06 Score=68.62 Aligned_cols=91 Identities=11% Similarity=0.024 Sum_probs=65.4
Q ss_pred HHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-------CCCchHHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHH
Q 023416 17 VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-------MDYNADVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATL 88 (282)
Q Consensus 17 ~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~ 88 (282)
++-.|+++ .|--|+++..|-||+|.+.. .-.|.++..+|++.|++++..+... ...+++++|+|.||.+
T Consensus 50 ~~~~lA~~---~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~L 126 (434)
T PF05577_consen 50 FMWELAKE---FGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGAL 126 (434)
T ss_dssp HHHHHHHH---HTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHH
T ss_pred hHHHHHHH---cCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHH
Confidence 56677777 36899999999999997522 3468999999999999877622211 3568999999999999
Q ss_pred HHHHHHhCCCcccceeeecCCC
Q 023416 89 TVRAAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 89 a~~~~~~~~~~v~~lvl~~p~~ 110 (282)
|..+-.++|+.|.+.+.-+++.
T Consensus 127 aaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 127 AAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHH-TTT-SEEEEET--C
T ss_pred HHHHHhhCCCeeEEEEecccee
Confidence 9999999999999888877653
No 131
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.15 E-value=1.5e-05 Score=51.69 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=54.0
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhc
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
..|+|++.++.|+.+|.+.++.+.+.+++++++.+++. |......-.-+.+.+.+||.+..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999999998 99886545667888889998654
No 132
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.09 E-value=7.4e-06 Score=59.22 Aligned_cols=60 Identities=13% Similarity=0.111 Sum_probs=43.4
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhcc---C--CceEEEeCCc-ccCC-----CCChH------HHHHHHHHHHHhh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAK---G--VTKFVEVPGA-LLPQ-----EEYPA------MVAQELYQFLQQT 277 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~-H~~~-----~e~p~------~~~~~i~~fl~~~ 277 (282)
++|++++.|+.|..+|.+....+.+.. + ..+++++++- |-.+ .+.|| +..+.+.+|+.+.
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999998877776543 2 2468999998 8654 34454 4556666776653
No 133
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.98 E-value=7e-07 Score=70.53 Aligned_cols=109 Identities=15% Similarity=0.221 Sum_probs=59.2
Q ss_pred CCCcccCcccccchH-HHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEE
Q 023416 1 MIPTISDVSTVEEWR-LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVI 79 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~-~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l 79 (282)
++|||....+...|. .+.+.|-+.. ..++.||++|+...-.................+..+|..|.........+++|
T Consensus 76 iiHGw~~~~~~~~~~~~~~~all~~~-~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihl 154 (331)
T PF00151_consen 76 IIHGWTGSGSSESWIQDMIKALLQKD-TGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHL 154 (331)
T ss_dssp EE--TT-TT-TTTHHHHHHHHHHCC---S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEE
T ss_pred EEcCcCCcccchhHHHHHHHHHHhhc-cCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEE
Confidence 478888766445554 4555443320 01599999999643221100011123344445555555443111111678999
Q ss_pred EcccHHHHHHHHHHHhCCC--cccceeeecCCC
Q 023416 80 FGGGHAATLTVRAAKKNLV--KPTAIAAVAPTW 110 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~--~v~~lvl~~p~~ 110 (282)
+|||+|+.+|......... ++.+++.++|+.
T Consensus 155 IGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 155 IGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp EEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred EeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 9999999999988886655 899999999853
No 134
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.97 E-value=0.00024 Score=51.54 Aligned_cols=86 Identities=10% Similarity=0.020 Sum_probs=62.2
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC-CCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHH
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAA 93 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~ 93 (282)
..+...|.+. +|.++-+-++- +.. -...++.+-++|+..++++++...+ ...++|+|||.|+.=.+.|.
T Consensus 56 ~~L~~~lde~----~wslVq~q~~S----sy~G~Gt~slk~D~edl~~l~~Hi~~~~f--St~vVL~GhSTGcQdi~yYl 125 (299)
T KOG4840|consen 56 TMLNRYLDEN----SWSLVQPQLRS----SYNGYGTFSLKDDVEDLKCLLEHIQLCGF--STDVVLVGHSTGCQDIMYYL 125 (299)
T ss_pred HHHHHHHhhc----cceeeeeeccc----cccccccccccccHHHHHHHHHHhhccCc--ccceEEEecCccchHHHHHH
Confidence 4566667766 89999887752 211 1345777889999999998875433 45899999999999888887
Q ss_pred H--hCCCcccceeeecCCC
Q 023416 94 K--KNLVKPTAIAAVAPTW 110 (282)
Q Consensus 94 ~--~~~~~v~~lvl~~p~~ 110 (282)
. ..+..+.+.|+.+|..
T Consensus 126 Tnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 126 TNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred HhccchHHHHHHHHhCccc
Confidence 3 2344577778888764
No 135
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=0.00019 Score=60.09 Aligned_cols=193 Identities=12% Similarity=-0.004 Sum_probs=114.9
Q ss_pred cccccchHHH--HHHHHHhhcCCCeEEEEecCCCCCCCCCC--------CCCCchHHHHHHHHHHhhCCC-CCCcCCCCc
Q 023416 8 VSTVEEWRLV--AQDIVQRVGKVNWRATIVDWPGLGYSDRP--------KMDYNADVMEKFVVDLINAPD-SPVSSSESD 76 (282)
Q Consensus 8 ~ss~~~w~~~--~~~L~~~~~~~g~~vi~~D~~G~G~S~~~--------~~~~~~~~~~~~l~~~i~~l~-~~~~~~~~~ 76 (282)
..+++.|... ...|+.. ||-|+.+|.||-..-... -....+++.++-+.-++++.+ ++ -..
T Consensus 657 Vnnsfkgi~ylR~~~Lasl----Gy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfid----mdr 728 (867)
T KOG2281|consen 657 VNNSFKGIQYLRFCRLASL----GYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFID----MDR 728 (867)
T ss_pred eeccccceehhhhhhhhhc----ceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCccc----chh
Confidence 3444444433 3456777 899999999996544321 145677888888888888875 22 457
Q ss_pred eEEEcccHHHHHHHHHHHhCCCcccceeeecCCCCCCCCccccCCCchhhhhhhhhhhhcCcchhhhHHhhhhhcHHHHH
Q 023416 77 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 156 (282)
Q Consensus 77 ~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
|.+-|+|.||.+++....++|+-++..|.-+|. ..+ ..+.. .-..
T Consensus 729 V~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapV-----T~W-------------------------~~YDT-----gYTE 773 (867)
T KOG2281|consen 729 VGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPV-----TDW-------------------------RLYDT-----GYTE 773 (867)
T ss_pred eeEeccccccHHHHHHhhcCcceeeEEeccCcc-----eee-------------------------eeecc-----cchh
Confidence 889999999999999999999877655543332 111 00100 0000
Q ss_pred HHHhhccccCCCCCChHHHHHHHHHHhhcCCCcchHHHhhccCCCCCCHHHHHHHhhcccCCccEEEEecCCCCCCCHHH
Q 023416 157 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 236 (282)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P~lii~G~~D~~~~~~~ 236 (282)
+.+ ..++.....+. ..+.. ...+.+++- .-..|++||--|.-+....
T Consensus 774 RYM---------g~P~~nE~gY~-----------agSV~-----------~~Veklpde--pnRLlLvHGliDENVHF~H 820 (867)
T KOG2281|consen 774 RYM---------GYPDNNEHGYG-----------AGSVA-----------GHVEKLPDE--PNRLLLVHGLIDENVHFAH 820 (867)
T ss_pred hhc---------CCCccchhccc-----------chhHH-----------HHHhhCCCC--CceEEEEecccccchhhhh
Confidence 000 01100000000 00000 022333332 4568999999997665544
Q ss_pred HH----HHHhccCCceEEEeCCc-ccCC-CCChHHHHHHHHHHHHh
Q 023416 237 ME----ALKGAKGVTKFVEVPGA-LLPQ-EEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 237 ~~----~~~~~~~~~~~~~~~~~-H~~~-~e~p~~~~~~i~~fl~~ 276 (282)
.. .+.+....-++.++|+- |.+- .|..+-....+..|+++
T Consensus 821 ts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 821 TSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 44 34455666789999999 9864 45566677788888875
No 136
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.93 E-value=2.3e-05 Score=58.17 Aligned_cols=103 Identities=11% Similarity=0.016 Sum_probs=63.6
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcC-CCCceEEE
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS-SESDLVIF 80 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l~ 80 (282)
++|+.. ....|..++.+++.+ ||-|+|+++-.--.-+..++.-+....++.+..-+.++...... -..++.++
T Consensus 52 ~HG~~l--~ns~Ys~lL~HIASH----GfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~ 125 (307)
T PF07224_consen 52 LHGFNL--YNSFYSQLLAHIASH----GFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALS 125 (307)
T ss_pred eechhh--hhHHHHHHHHHHhhc----CeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEe
Confidence 445543 245567899999998 99999999964211111111112223333333333333322211 35689999
Q ss_pred cccHHHHHHHHHHHhCC--CcccceeeecCCC
Q 023416 81 GGGHAATLTVRAAKKNL--VKPTAIAAVAPTW 110 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~--~~v~~lvl~~p~~ 110 (282)
|||.||..|...|..+. ..++++|.++|..
T Consensus 126 GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 126 GHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred ecCCccHHHHHHHhcccccCchhheecccccC
Confidence 99999999998887543 4578899998864
No 137
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.87 E-value=0.00046 Score=57.20 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=55.2
Q ss_pred eEEEEecCC-CCCCCCCCC---CCCchHHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHHHHHHHH----hC----
Q 023416 30 WRATIVDWP-GLGYSDRPK---MDYNADVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATLTVRAAK----KN---- 96 (282)
Q Consensus 30 ~~vi~~D~~-G~G~S~~~~---~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~a~~~~~----~~---- 96 (282)
..++-+|.| |-|.|-... ...+.++.++++.+++...-..... ...+++|.|-|.||..+-.++. ..
T Consensus 86 an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~ 165 (415)
T PF00450_consen 86 ANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGD 165 (415)
T ss_dssp SEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--
T ss_pred cceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccc
Confidence 789999955 999996533 2457788888888888655322222 2669999999999998877765 22
Q ss_pred --CCcccceeeecCC
Q 023416 97 --LVKPTAIAAVAPT 109 (282)
Q Consensus 97 --~~~v~~lvl~~p~ 109 (282)
...++++++.+|.
T Consensus 166 ~~~inLkGi~IGng~ 180 (415)
T PF00450_consen 166 QPKINLKGIAIGNGW 180 (415)
T ss_dssp STTSEEEEEEEESE-
T ss_pred ccccccccceecCcc
Confidence 5668899988774
No 138
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.84 E-value=2.1e-06 Score=63.38 Aligned_cols=87 Identities=11% Similarity=0.070 Sum_probs=48.8
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeE---EEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCce
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWR---ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 77 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 77 (282)
|+||..+ .....|..+++.|.++ ||. |+++++-....+..........+.+..+.+||+.....-. . +|
T Consensus 6 lVHG~~~-~~~~~w~~~~~~l~~~----GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG--a-kV 77 (219)
T PF01674_consen 6 LVHGTGG-NAYSNWSTLAPYLKAA----GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG--A-KV 77 (219)
T ss_dssp EE--TTT-TTCGGCCHHHHHHHHT----T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT-----E
T ss_pred EECCCCc-chhhCHHHHHHHHHHc----CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC--C-EE
Confidence 4566652 3568899999999998 999 8999984443322111111122334555555554320000 5 99
Q ss_pred EEEcccHHHHHHHHHHHh
Q 023416 78 VIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~~~~ 95 (282)
-|+|||||+.++..+...
T Consensus 78 DIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEEETCHHHHHHHHHHH
T ss_pred EEEEcCCcCHHHHHHHHH
Confidence 999999999999988763
No 139
>PRK04940 hypothetical protein; Provisional
Probab=97.81 E-value=0.004 Score=44.44 Aligned_cols=52 Identities=10% Similarity=-0.121 Sum_probs=36.1
Q ss_pred ccEEEEecCCCCCCCHHHHHHHHhccCCc-eEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 219 LPLLVVSTEGSPRRSKAEMEALKGAKGVT-KFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 219 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
-..+++..+.|.+.+...+.+.- .+. ++.+.+|| |-+ +.-++....|.+|+.
T Consensus 125 ~r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 125 DRCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred ccEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 44689999999999876554332 223 57899999 863 234557778888874
No 140
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.73 E-value=0.00013 Score=56.64 Aligned_cols=73 Identities=15% Similarity=0.284 Sum_probs=53.8
Q ss_pred HHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCC-cCCCCceEEEcccHHHHHHHHHHHhC
Q 023416 18 AQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAKKN 96 (282)
Q Consensus 18 ~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~l~G~s~G~~~a~~~~~~~ 96 (282)
+..+++. .|-.|+.+.+||.|.|..+. +.++++.+-.+.++.+..+. ......+++.|||+||.++.....++
T Consensus 163 ~~~~ak~---~~aNvl~fNYpGVg~S~G~~---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 163 IQRFAKE---LGANVLVFNYPGVGSSTGPP---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHH---cCCcEEEECCCccccCCCCC---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 4455554 37899999999999997653 46888888887777664211 11247899999999999998866653
No 141
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.71 E-value=0.0044 Score=51.11 Aligned_cols=61 Identities=3% Similarity=-0.050 Sum_probs=47.1
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 48 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 48 ~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
..-|+++.+.....|++.+.......+ +++|+|-..||..++.+|+.+|+.+..+|+-+++
T Consensus 114 pgQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 114 PGQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 345888888877788776642221113 8999999999999999999999999999987543
No 142
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00031 Score=50.34 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=39.4
Q ss_pred HHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc-ccCCCC
Q 023416 209 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEE 261 (282)
Q Consensus 209 ~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e 261 (282)
...+..+ ++|++++.|++|.---.+..+.+......+++..+++. |+-.++
T Consensus 200 l~~~~~v--~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 200 LWEYTDV--TVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIE 251 (270)
T ss_pred HHHhcCc--eeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHH
Confidence 3455666 89999999999975555667777777777899999997 985444
No 143
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.70 E-value=0.001 Score=49.62 Aligned_cols=58 Identities=9% Similarity=0.044 Sum_probs=50.6
Q ss_pred EEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCccc-CCCCChHHHHHHHHHHHHhhc
Q 023416 221 LLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALL-PQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 221 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~e~p~~~~~~i~~fl~~~~ 278 (282)
+.++.+++|..+|......+.+..|++++..+++||. ..+-+-+.|-+.|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~egGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLEGGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEeecCceeeeehhchHHHHHHHHHHHhhh
Confidence 5778889999999988899999999999999998886 567778899999999988754
No 144
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.69 E-value=0.00016 Score=54.52 Aligned_cols=77 Identities=10% Similarity=0.100 Sum_probs=49.9
Q ss_pred EEEEecCCCCCCCCC-CCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH----hCC-----Ccc
Q 023416 31 RATIVDWPGLGYSDR-PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK----KNL-----VKP 100 (282)
Q Consensus 31 ~vi~~D~~G~G~S~~-~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~----~~~-----~~v 100 (282)
.++.+.+|..|.-.. .....+...-...+.++++.+..... ..++++++||||+.+.+.... ... .++
T Consensus 50 ~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~--~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~ 127 (233)
T PF05990_consen 50 VVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPG--IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARF 127 (233)
T ss_pred eEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccC--CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhh
Confidence 799999999886322 11122333444455555555432111 689999999999999998754 121 367
Q ss_pred cceeeecCC
Q 023416 101 TAIAAVAPT 109 (282)
Q Consensus 101 ~~lvl~~p~ 109 (282)
..+++++|-
T Consensus 128 ~~viL~ApD 136 (233)
T PF05990_consen 128 DNVILAAPD 136 (233)
T ss_pred heEEEECCC
Confidence 888888874
No 145
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.68 E-value=0.0012 Score=50.93 Aligned_cols=100 Identities=7% Similarity=-0.062 Sum_probs=65.7
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
|.|||.+..+...-..+.+.+.+. .|..++++.. |.+.....-..+.+.++.+.+-+..... . ..-++++
T Consensus 30 iwHG~GD~c~~~g~~~~~~l~~~~---~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~--l--~~G~naI 99 (314)
T PLN02633 30 MLHGIGTQCSDATNANFTQLLTNL---SGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKE--L--SQGYNIV 99 (314)
T ss_pred EecCCCcccCCchHHHHHHHHHhC---CCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchh--h--hCcEEEE
Confidence 357887666666777777777554 3666666654 4432222233455555555555544221 1 3458899
Q ss_pred cccHHHHHHHHHHHhCCC--cccceeeecCCC
Q 023416 81 GGGHAATLTVRAAKKNLV--KPTAIAAVAPTW 110 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~--~v~~lvl~~p~~ 110 (282)
|+|-||.++..+.++.+. .|..+|.++..-
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999886 599999997653
No 146
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.68 E-value=3.7e-05 Score=62.68 Aligned_cols=86 Identities=10% Similarity=0.144 Sum_probs=61.2
Q ss_pred chHHHHHHHHHhhcCCCeEE-----EE-ecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHH
Q 023416 13 EWRLVAQDIVQRVGKVNWRA-----TI-VDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 86 (282)
Q Consensus 13 ~w~~~~~~L~~~~~~~g~~v-----i~-~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~ 86 (282)
.|.++++.|.+. ||.. -+ +|+|= | + . ..+.+...++..|+..... . +.+++|+||||||
T Consensus 66 ~~~~li~~L~~~----GY~~~~~l~~~pYDWR~---~--~-~--~~~~~~~~lk~~ie~~~~~-~--~~kv~li~HSmGg 130 (389)
T PF02450_consen 66 YFAKLIENLEKL----GYDRGKDLFAAPYDWRL---S--P-A--ERDEYFTKLKQLIEEAYKK-N--GKKVVLIAHSMGG 130 (389)
T ss_pred hHHHHHHHHHhc----CcccCCEEEEEeechhh---c--h-h--hHHHHHHHHHHHHHHHHHh-c--CCcEEEEEeCCCc
Confidence 699999999987 6642 22 57662 1 1 1 3456677777777654311 0 6899999999999
Q ss_pred HHHHHHHHhCCC------cccceeeecCCCCCC
Q 023416 87 TLTVRAAKKNLV------KPTAIAAVAPTWAGP 113 (282)
Q Consensus 87 ~~a~~~~~~~~~------~v~~lvl~~p~~~~~ 113 (282)
.++..+....+. .|+++|.++++..|.
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred hHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 999998876532 589999999876654
No 147
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.67 E-value=0.00016 Score=52.43 Aligned_cols=57 Identities=18% Similarity=0.210 Sum_probs=47.8
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCcccCCCCChHHHHHHHHHHHHh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~~ 276 (282)
++|.|-|.|+.|.+++.+..+.+.+..++..++.-+|||+++... ...+.|.+|+.+
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFKDATVLEHPGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcCCCeEEecCCCccCCCch--HHHHHHHHHHHH
Confidence 899999999999999999999999999999888888889988766 445555555544
No 148
>PLN02606 palmitoyl-protein thioesterase
Probab=97.66 E-value=0.016 Score=44.89 Aligned_cols=100 Identities=7% Similarity=0.011 Sum_probs=63.4
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
+.|||.+..+...+..+.+.+.+. .|+.+..+- .|-|.. ...-....+.++.+.+-+..... . ..-+.++
T Consensus 31 iwHGlgD~~~~~~~~~~~~~i~~~---~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~~~~--L--~~G~naI 100 (306)
T PLN02606 31 LFHGFGGECSNGKVSNLTQFLINH---SGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQMKE--L--SEGYNIV 100 (306)
T ss_pred EECCCCcccCCchHHHHHHHHHhC---CCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhcchh--h--cCceEEE
Confidence 468888666677888888888533 145444443 232211 11112445555555555544221 1 3458899
Q ss_pred cccHHHHHHHHHHHhCCC--cccceeeecCCC
Q 023416 81 GGGHAATLTVRAAKKNLV--KPTAIAAVAPTW 110 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~~--~v~~lvl~~p~~ 110 (282)
|+|-||.++..+.++.|. .|+.+|.+++.-
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999876 589999987653
No 149
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.57 E-value=0.00014 Score=58.00 Aligned_cols=96 Identities=4% Similarity=0.059 Sum_probs=70.7
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeE---EEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCce
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWR---ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 77 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 77 (282)
++||+ ..+...|..+...+... |+. ++++++++- ... .......+.+...+.+++...+ .+++
T Consensus 64 lVhG~--~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~-~~~-~~~~~~~~ql~~~V~~~l~~~g------a~~v 129 (336)
T COG1075 64 LVHGL--GGGYGNFLPLDYRLAIL----GWLTNGVYAFELSGG-DGT-YSLAVRGEQLFAYVDEVLAKTG------AKKV 129 (336)
T ss_pred EEccC--cCCcchhhhhhhhhcch----HHHhccccccccccc-CCC-ccccccHHHHHHHHHHHHhhcC------CCce
Confidence 35676 35667777777777776 676 899999866 111 1133455666666777777666 6899
Q ss_pred EEEcccHHHHHHHHHHHhCC--CcccceeeecCCC
Q 023416 78 VIFGGGHAATLTVRAAKKNL--VKPTAIAAVAPTW 110 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~~~~~~--~~v~~lvl~~p~~ 110 (282)
.++||||||.....+....+ .+|++++.++++-
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 99999999999998888766 8899999998753
No 150
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.54 E-value=0.0035 Score=47.79 Aligned_cols=57 Identities=11% Similarity=0.098 Sum_probs=46.8
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHh----ccCCceEEEeCCc-ccCCC-CChHHHHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFL 274 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~-H~~~~-e~p~~~~~~i~~fl 274 (282)
.+|-++++++.|.+++.+..+++.+ ..-.++.+.++++ |..|. ++|++..+++.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 7899999999999999987776643 2334777889999 99776 47999999999885
No 151
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.51 E-value=0.00022 Score=56.59 Aligned_cols=84 Identities=12% Similarity=0.126 Sum_probs=49.2
Q ss_pred HHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-----CCCchHHHHH---------------H---HHHHhhCCCCCCcC
Q 023416 16 LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-----MDYNADVMEK---------------F---VVDLINAPDSPVSS 72 (282)
Q Consensus 16 ~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~---------------~---l~~~i~~l~~~~~~ 72 (282)
.+...|+++ ||-|+++|.+|+|+..... ..++.+.++. | +.++++.+. .+
T Consensus 151 ~~g~~LAk~----GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slp---eV 223 (390)
T PF12715_consen 151 DYGDQLAKR----GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLP---EV 223 (390)
T ss_dssp -HHHHHHTT----TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-T---TE
T ss_pred cHHHHHHhC----CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCc---cc
Confidence 367789998 9999999999999875432 1222222222 1 233444432 11
Q ss_pred CCCceEEEcccHHHHHHHHHHHhCCCcccceeeec
Q 023416 73 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 73 ~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~ 107 (282)
-..+|.++|+||||..++.++... ++|+..|..+
T Consensus 224 D~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 224 DPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp EEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred CccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 256789999999999999988742 3466666544
No 152
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.50 E-value=0.0022 Score=53.64 Aligned_cols=43 Identities=21% Similarity=0.196 Sum_probs=36.6
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhc-cCCceEEEeCCc-ccCCC
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGA-KGVTKFVEVPGA-LLPQE 260 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~-H~~~~ 260 (282)
+.|+|++.|.+|..++++..+.+++. -...+++++.++ |.+-.
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 89999999999999999999998865 345679999999 97543
No 153
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.22 E-value=0.001 Score=54.30 Aligned_cols=88 Identities=13% Similarity=0.084 Sum_probs=69.3
Q ss_pred HHHHHhhcCCCeEEEEecCCCCCCCCCC-C------CCCchHHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHHHH
Q 023416 19 QDIVQRVGKVNWRATIVDWPGLGYSDRP-K------MDYNADVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATLTV 90 (282)
Q Consensus 19 ~~L~~~~~~~g~~vi~~D~~G~G~S~~~-~------~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~a~ 90 (282)
-.++++ .|-.|+-+..|-||+|.+. . .-.|......|+++||+++...... -..+++.+|+|..|.++.
T Consensus 111 ~~~Akk---fgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsA 187 (514)
T KOG2182|consen 111 LQWAKK---FGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSA 187 (514)
T ss_pred HHHHHH---hCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHH
Confidence 345555 3689999999999999652 2 3457888899999999988755432 235899999999999999
Q ss_pred HHHHhCCCcccceeeecCC
Q 023416 91 RAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 91 ~~~~~~~~~v~~lvl~~p~ 109 (282)
.+-+++|+.+.+-|..+.+
T Consensus 188 W~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 188 WFREKYPELTVGSVASSAP 206 (514)
T ss_pred HHHHhCchhheeecccccc
Confidence 9999999998887776554
No 154
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.22 E-value=0.0012 Score=52.65 Aligned_cols=79 Identities=14% Similarity=0.021 Sum_probs=59.6
Q ss_pred eEEEEecCCCCCCCCCC-C---------CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCc
Q 023416 30 WRATIVDWPGLGYSDRP-K---------MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK 99 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~~-~---------~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~ 99 (282)
--+|-...|-||+|-+- . .-.|.++-.+|.+.++..++.+......+|+.+|+|.||++|..+-.++|..
T Consensus 112 AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi 191 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI 191 (492)
T ss_pred ceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhh
Confidence 56888999999999641 1 2346677777888888777644322367899999999999999999999988
Q ss_pred ccceeeecC
Q 023416 100 PTAIAAVAP 108 (282)
Q Consensus 100 v~~lvl~~p 108 (282)
|.+...-+.
T Consensus 192 v~GAlAaSA 200 (492)
T KOG2183|consen 192 VLGALAASA 200 (492)
T ss_pred hhhhhhccC
Confidence 777655443
No 155
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.22 E-value=0.00037 Score=58.40 Aligned_cols=94 Identities=10% Similarity=0.032 Sum_probs=59.4
Q ss_pred ccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC--CCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHH
Q 023416 11 VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP--KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATL 88 (282)
Q Consensus 11 ~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~--~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~ 88 (282)
...|.++++.|++. ||. --|+.|..--.+- ......+.+-..++.+|+..-.... +.+++|+|||||+.+
T Consensus 155 Y~vw~kLIe~L~~i----GY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv 226 (642)
T PLN02517 155 YFVWAVLIANLARI----GYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLY 226 (642)
T ss_pred ceeHHHHHHHHHHc----CCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHH
Confidence 35679999999988 886 4555544332221 1111235555666666664421101 689999999999999
Q ss_pred HHHHHHhC---------------CCcccceeeecCCCCC
Q 023416 89 TVRAAKKN---------------LVKPTAIAAVAPTWAG 112 (282)
Q Consensus 89 a~~~~~~~---------------~~~v~~lvl~~p~~~~ 112 (282)
++.+...- -..|++.|.++++..+
T Consensus 227 ~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 227 FLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 99876521 1136888999887554
No 156
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.22 E-value=0.0043 Score=49.03 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=30.9
Q ss_pred CCceEEEcccHHHHHHHHHHHhCC-CcccceeeecCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNL-VKPTAIAAVAPT 109 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~-~~v~~lvl~~p~ 109 (282)
+.+++|+||+.|+.+++.+....+ ..++++|+|++.
T Consensus 192 ~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 192 GKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred CceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 566999999999999999988655 458999999984
No 157
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.21 E-value=0.0021 Score=47.87 Aligned_cols=84 Identities=10% Similarity=0.001 Sum_probs=52.5
Q ss_pred HHHHHhhcCCCeEEEEecCCCCCCCC----C-CC----CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHH
Q 023416 19 QDIVQRVGKVNWRATIVDWPGLGYSD----R-PK----MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLT 89 (282)
Q Consensus 19 ~~L~~~~~~~g~~vi~~D~~G~G~S~----~-~~----~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a 89 (282)
..|++. .||-|+.|+...-.... . .. ..-....+...+..++.+..++ ...|++.|+|.||.++
T Consensus 39 ~~lAd~---~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD----~~RVyv~G~S~Gg~ma 111 (220)
T PF10503_consen 39 NALADR---EGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID----PSRVYVTGLSNGGMMA 111 (220)
T ss_pred HHHhhc---CCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC----CCceeeEEECHHHHHH
Confidence 456665 57999999864321110 0 00 0111122222333333333333 6789999999999999
Q ss_pred HHHHHhCCCcccceeeecCC
Q 023416 90 VRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 90 ~~~~~~~~~~v~~lvl~~p~ 109 (282)
..++..+|+.+.++...+..
T Consensus 112 ~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 112 NVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred HHHHHhCCccceEEEeeccc
Confidence 99999999999998887653
No 158
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.21 E-value=0.00046 Score=52.97 Aligned_cols=53 Identities=13% Similarity=0.014 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 54 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 54 ~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
.+.++|..+|++--... .....++|+||||..|+.++.++|+.+.+++.++|.
T Consensus 97 ~l~~el~p~i~~~~~~~---~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTD---PDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHTHHHHHHHHHSSEE---ECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ehhccchhHHHHhcccc---cceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 34456666665332110 122899999999999999999999999999999974
No 159
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.09 E-value=0.00064 Score=55.11 Aligned_cols=90 Identities=12% Similarity=0.137 Sum_probs=57.5
Q ss_pred cchHHHHHHHHHhhcCCCeE------EEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHH
Q 023416 12 EEWRLVAQDIVQRVGKVNWR------ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHA 85 (282)
Q Consensus 12 ~~w~~~~~~L~~~~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G 85 (282)
..|..+++.|... ||. -..+|+|= |-.. .--.+++...++..|+..-.... +.+++|++||||
T Consensus 124 ~~w~~~i~~lv~~----GYe~~~~l~ga~YDwRl---s~~~--~e~rd~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG 192 (473)
T KOG2369|consen 124 WYWHELIENLVGI----GYERGKTLFGAPYDWRL---SYHN--SEERDQYLSKLKKKIETMYKLNG--GKKVVLISHSMG 192 (473)
T ss_pred HHHHHHHHHHHhh----CcccCceeeccccchhh---ccCC--hhHHHHHHHHHHHHHHHHHHHcC--CCceEEEecCCc
Confidence 4899999999988 776 34567762 1111 11223444445555443211111 699999999999
Q ss_pred HHHHHHHHHhCCC--------cccceeeecCCCCC
Q 023416 86 ATLTVRAAKKNLV--------KPTAIAAVAPTWAG 112 (282)
Q Consensus 86 ~~~a~~~~~~~~~--------~v~~lvl~~p~~~~ 112 (282)
+.+.+.+....+. .+++++-+++++.+
T Consensus 193 ~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 193 GLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred cHHHHHHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 9999999887665 36677777665443
No 160
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.85 E-value=0.011 Score=44.55 Aligned_cols=99 Identities=7% Similarity=-0.069 Sum_probs=68.8
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIF 80 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~ 80 (282)
++||+.+.+++.....+.+.+.+. +|..|+++|. |-| .....-....+.++.+.+.+..... ...-+.++
T Consensus 28 i~HGigd~c~~~~~~~~~q~l~~~---~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~----lsqGyniv 97 (296)
T KOG2541|consen 28 VWHGIGDSCSSLSMANLTQLLEEL---PGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPE----LSQGYNIV 97 (296)
T ss_pred EEeccCcccccchHHHHHHHHHhC---CCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchh----ccCceEEE
Confidence 468999888888899999999987 6899999997 334 2111223445556655555553321 14558889
Q ss_pred cccHHHHHHHHHHHhCC-CcccceeeecCC
Q 023416 81 GGGHAATLTVRAAKKNL-VKPTAIAAVAPT 109 (282)
Q Consensus 81 G~s~G~~~a~~~~~~~~-~~v~~lvl~~p~ 109 (282)
|.|-||.++..+++.-+ ..|..+|.++.+
T Consensus 98 g~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 98 GYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 99999999999998533 346778877654
No 161
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.78 E-value=0.0042 Score=46.41 Aligned_cols=94 Identities=7% Similarity=0.058 Sum_probs=53.5
Q ss_pred CcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHH
Q 023416 7 DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 86 (282)
Q Consensus 7 ~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~ 86 (282)
+++..-.|+.+++.|++. ||.|||.=+. .|.-...-..--.+.+-..+..+.+.-+.... .-+++-+|||+|+
T Consensus 29 ga~P~itYr~lLe~La~~----Gy~ViAtPy~-~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~--~lP~~~vGHSlGc 101 (250)
T PF07082_consen 29 GAAPQITYRYLLERLADR----GYAVIATPYV-VTFDHQAIAREVWERFERCLRALQKRGGLDPA--YLPVYGVGHSLGC 101 (250)
T ss_pred ccCcHHHHHHHHHHHHhC----CcEEEEEecC-CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcc--cCCeeeeecccch
Confidence 445667789999999998 9999997663 11100000000011111122222222111111 2467779999999
Q ss_pred HHHHHHHHhCCCcccceeeec
Q 023416 87 TLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 87 ~~a~~~~~~~~~~v~~lvl~~ 107 (282)
.+-+.....+...-++-++++
T Consensus 102 klhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 102 KLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred HHHHHHhhhccCcccceEEEe
Confidence 999988876655546667765
No 162
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.73 E-value=0.0022 Score=47.91 Aligned_cols=85 Identities=11% Similarity=0.082 Sum_probs=43.9
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHH----HHHHHHhhCCCCCCcCCCCc
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME----KFVVDLINAPDSPVSSSESD 76 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~----~~l~~~i~~l~~~~~~~~~~ 76 (282)
++||+.+ +..+|+.+...+.... ..+.--.+...++..... ....+++..+ +.+.+.++..... ..+
T Consensus 9 ~vHGL~G--~~~d~~~~~~~l~~~~--~~~~~~~i~~~~~~~n~~-~T~~gI~~~g~rL~~eI~~~~~~~~~~----~~~ 79 (217)
T PF05057_consen 9 FVHGLWG--NPADMRYLKNHLEKIP--EDLPNARIVVLGYSNNEF-KTFDGIDVCGERLAEEILEHIKDYESK----IRK 79 (217)
T ss_pred EeCCCCC--CHHHHHHHHHHHHHhh--hhcchhhhhhhccccccc-ccchhhHHHHHHHHHHHHHhccccccc----ccc
Confidence 4678863 5777877777776610 012211222222211111 1112344444 4444444443321 358
Q ss_pred eEEEcccHHHHHHHHHHH
Q 023416 77 LVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 77 ~~l~G~s~G~~~a~~~~~ 94 (282)
++++||||||.++..+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999876544
No 163
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.72 E-value=0.047 Score=40.31 Aligned_cols=37 Identities=8% Similarity=0.004 Sum_probs=27.4
Q ss_pred EEEecCCCCCCCHHHHHHHHhccCCceEEEeCCcccCCC
Q 023416 222 LVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQE 260 (282)
Q Consensus 222 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 260 (282)
..+-|++|.+.|++..+.+-+.. ..+.+++++|++..
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~--~~~~~~~~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR--CTIVEIDAPHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc--CcEEEecCCCcCch
Confidence 36789999999998888766532 34677776698653
No 164
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.70 E-value=0.006 Score=51.33 Aligned_cols=84 Identities=12% Similarity=-0.007 Sum_probs=58.8
Q ss_pred HHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCc-hHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCC
Q 023416 20 DIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYN-ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL 97 (282)
Q Consensus 20 ~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~-~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~ 97 (282)
.++.+ ||.|+..|.||.|.|+..- ..++ -.+-..|+.+.+.....- ..+|-.+|-|++|.-.+..|...|
T Consensus 75 ~~aa~----GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWs----NG~Vgm~G~SY~g~tq~~~Aa~~p 146 (563)
T COG2936 75 WFAAQ----GYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWS----NGNVGMLGLSYLGFTQLAAAALQP 146 (563)
T ss_pred eeecC----ceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCcc----CCeeeeecccHHHHHHHHHHhcCC
Confidence 35555 8999999999999998743 2223 111123444555443321 668889999999999999999888
Q ss_pred CcccceeeecCCCC
Q 023416 98 VKPTAIAAVAPTWA 111 (282)
Q Consensus 98 ~~v~~lvl~~p~~~ 111 (282)
..++.++-..+...
T Consensus 147 PaLkai~p~~~~~D 160 (563)
T COG2936 147 PALKAIAPTEGLVD 160 (563)
T ss_pred chheeecccccccc
Confidence 77888777766543
No 165
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.61 E-value=0.002 Score=48.01 Aligned_cols=46 Identities=22% Similarity=0.215 Sum_probs=32.9
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCC-ceEEEeCCcccCCCCCh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGALLPQEEYP 263 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~~~e~p 263 (282)
++|+|.|+|++|.+++++..+.+.+...+ .+++..++||.++...+
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~~~~ 207 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPRKKE 207 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS----HH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcCChh
Confidence 89999999999999998888888877666 88899999988766543
No 166
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.53 E-value=0.0047 Score=42.61 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 54 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 54 ~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
...+.+.++++... ..++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~------~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYP------DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHST------TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc------CccchhhccchHHHHHHHHHHh
Confidence 44455555555554 5789999999999999988763
No 167
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.51 E-value=0.0069 Score=42.58 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=26.3
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCC----cccceeeecC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLV----KPTAIAAVAP 108 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~----~v~~lvl~~p 108 (282)
..+++++|||+||.+|..++..... .+..++..++
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 6789999999999999998875433 3445555555
No 168
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.51 E-value=0.0092 Score=49.18 Aligned_cols=53 Identities=8% Similarity=0.020 Sum_probs=39.8
Q ss_pred HHHHHHHHhhCCC-CCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 55 MEKFVVDLINAPD-SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 55 ~~~~l~~~i~~l~-~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
++++|.-+|++.- ... -....+|+|+||||..|+..+.++|+.+.+++.+++.
T Consensus 269 l~~eLlP~I~~~y~~~~--d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 269 VQQELLPQVRAIAPFSD--DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHhCCCCC--CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 4455666665431 100 1456889999999999999999999999999999873
No 169
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.45 E-value=0.09 Score=42.42 Aligned_cols=61 Identities=16% Similarity=0.107 Sum_probs=47.4
Q ss_pred hhcccCCccEEEEecCCCCCCCHHHHHHHHhccC-CceEEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 212 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 212 l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
.+++ ++|.++|.|..|.+..+.....+-...+ ...+..+|++ |..-. ..+.+.|..|+...
T Consensus 258 ~~rL--~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 258 RDRL--TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred HHhc--CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 3556 8899999999999877777776665554 4558899999 98766 67778888888764
No 170
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.40 E-value=0.007 Score=45.77 Aligned_cols=50 Identities=12% Similarity=0.059 Sum_probs=38.5
Q ss_pred HHHHHHHhhC-CCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 56 EKFVVDLINA-PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 56 ~~~l~~~i~~-l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
.++++-+|++ .... ..+-.++|||+||.+++.....+|..+...++++|.
T Consensus 121 ~~~lkP~Ie~~y~~~----~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 121 TEQLKPFIEARYRTN----SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHhhHHHHhcccccC----cccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 3345555554 2222 455889999999999999999999999999999984
No 171
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.25 E-value=0.018 Score=45.72 Aligned_cols=83 Identities=16% Similarity=0.207 Sum_probs=52.4
Q ss_pred ccccchHHHHHHHHHhhcCCCeEEEEecCCC--CCCCCCCCC---CCchHH---HHHHHHHHhhCCCC----CC--cC-C
Q 023416 9 STVEEWRLVAQDIVQRVGKVNWRATIVDWPG--LGYSDRPKM---DYNADV---MEKFVVDLINAPDS----PV--SS-S 73 (282)
Q Consensus 9 ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G--~G~S~~~~~---~~~~~~---~~~~l~~~i~~l~~----~~--~~-~ 73 (282)
++...|..+++.|++. ||-|.++|.|| .|....... .|.... -..|+..+++.+.. +. .. -
T Consensus 82 s~~~~f~~~A~~lAs~----Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld 157 (365)
T COG4188 82 SYVTGFAWLAEHLASY----GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLD 157 (365)
T ss_pred CCccchhhhHHHHhhC----ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccC
Confidence 4567788899999998 99999999999 455443211 122111 12233333332221 10 01 2
Q ss_pred CCceEEEcccHHHHHHHHHHHh
Q 023416 74 ESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
..+|.++|||+||.-++..+..
T Consensus 158 ~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 158 PQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred ccceEEEecccccHHHHHhccc
Confidence 4579999999999999988764
No 172
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.18 E-value=0.018 Score=44.12 Aligned_cols=88 Identities=17% Similarity=0.061 Sum_probs=54.4
Q ss_pred HHHHHhhcCCCeEEEEecCC-------CCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHH
Q 023416 19 QDIVQRVGKVNWRATIVDWP-------GLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVR 91 (282)
Q Consensus 19 ~~L~~~~~~~g~~vi~~D~~-------G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~ 91 (282)
+.|++. .||-|..||-- |+|.+-.|.....-.+-+..|.++++.+..+...-...|++.|.|-||.++..
T Consensus 84 d~lAd~---~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~ 160 (312)
T COG3509 84 DALADR---EGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANR 160 (312)
T ss_pred hhhhcc---cCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHH
Confidence 345554 47999999521 22222112111111122444445554444333322568999999999999999
Q ss_pred HHHhCCCcccceeeecCC
Q 023416 92 AAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 92 ~~~~~~~~v~~lvl~~p~ 109 (282)
++..+|+.+.++..++..
T Consensus 161 lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 161 LACEYPDIFAAIAPVAGL 178 (312)
T ss_pred HHhcCcccccceeeeecc
Confidence 999999999999888753
No 173
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.18 E-value=0.017 Score=45.61 Aligned_cols=74 Identities=18% Similarity=0.302 Sum_probs=46.9
Q ss_pred eEEEEecCCCCCCC-----CCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH-------h-C
Q 023416 30 WRATIVDWPGLGYS-----DRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-------K-N 96 (282)
Q Consensus 30 ~~vi~~D~~G~G~S-----~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~-------~-~ 96 (282)
...+.+-+|--|.- ++....|+-..+...+..+.+... ..+++|++||||..+++.... + -
T Consensus 147 ~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~------~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l 220 (377)
T COG4782 147 GVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP------VKRIYLLAHSMGTWLLMEALRQLAIRADRPL 220 (377)
T ss_pred cceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC------CceEEEEEecchHHHHHHHHHHHhccCCcch
Confidence 46788888877753 122233444444444444444433 678999999999999998765 1 3
Q ss_pred CCcccceeeecCC
Q 023416 97 LVKPTAIAAVAPT 109 (282)
Q Consensus 97 ~~~v~~lvl~~p~ 109 (282)
+.+++-+||-+|-
T Consensus 221 ~~ki~nViLAaPD 233 (377)
T COG4782 221 PAKIKNVILAAPD 233 (377)
T ss_pred hhhhhheEeeCCC
Confidence 4457777877773
No 174
>COG3150 Predicted esterase [General function prediction only]
Probab=96.15 E-value=0.033 Score=38.86 Aligned_cols=65 Identities=12% Similarity=0.126 Sum_probs=47.4
Q ss_pred ecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 35 VDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 35 ~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
.|.|-.+-|-. .........++.++.++...+ +.+..++|-|+||.+|...+.++..+ + |+++|.
T Consensus 26 ~~~~~i~y~~p-~l~h~p~~a~~ele~~i~~~~------~~~p~ivGssLGGY~At~l~~~~Gir--a-v~~NPa 90 (191)
T COG3150 26 EDVRDIEYSTP-HLPHDPQQALKELEKAVQELG------DESPLIVGSSLGGYYATWLGFLCGIR--A-VVFNPA 90 (191)
T ss_pred ccccceeeecC-CCCCCHHHHHHHHHHHHHHcC------CCCceEEeecchHHHHHHHHHHhCCh--h-hhcCCC
Confidence 34444444432 234577888999999999998 67799999999999999999875543 3 345664
No 175
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.11 E-value=0.019 Score=41.08 Aligned_cols=58 Identities=12% Similarity=0.147 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCC
Q 023416 52 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 52 ~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~ 110 (282)
.+.-+..|..|++.|.-.. .....+.++|||+|+.++-..+...+..++.+++++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 4566677888887775322 125688999999999999998887677899999997653
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.02 E-value=0.013 Score=50.82 Aligned_cols=83 Identities=16% Similarity=0.168 Sum_probs=45.1
Q ss_pred eEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhh----CCCC--CCcC-CCCceEEEcccHHHHHHHHHHH---hCCCc
Q 023416 30 WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLIN----APDS--PVSS-SESDLVIFGGGHAATLTVRAAK---KNLVK 99 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~----~l~~--~~~~-~~~~~~l~G~s~G~~~a~~~~~---~~~~~ 99 (282)
|+.+++|+-+= .|. -...+..+.++.+.+.|+ .... +..+ ..++|+++||||||.+|..... ..+..
T Consensus 133 ~DFFaVDFnEe-~tA--m~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~s 209 (973)
T KOG3724|consen 133 FDFFAVDFNEE-FTA--MHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGS 209 (973)
T ss_pred cceEEEcccch-hhh--hccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccch
Confidence 56777776430 000 022344444444443332 2222 2333 5788999999999999998765 23445
Q ss_pred ccceeeec-CCCCCCCC
Q 023416 100 PTAIAAVA-PTWAGPLP 115 (282)
Q Consensus 100 v~~lvl~~-p~~~~~~~ 115 (282)
|+-++..+ |....|++
T Consensus 210 VntIITlssPH~a~Pl~ 226 (973)
T KOG3724|consen 210 VNTIITLSSPHAAPPLP 226 (973)
T ss_pred hhhhhhhcCcccCCCCC
Confidence 66555554 43344443
No 177
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.91 E-value=0.029 Score=43.91 Aligned_cols=66 Identities=23% Similarity=0.299 Sum_probs=48.8
Q ss_pred HHhhcccCC-ccEEEEecCCCCCCCHHHHHHHHhccC--CceEEEeCCc-ccCCCCChH---HHHHHHHHHHHhh
Q 023416 210 QLFADLEGK-LPLLVVSTEGSPRRSKAEMEALKGAKG--VTKFVEVPGA-LLPQEEYPA---MVAQELYQFLQQT 277 (282)
Q Consensus 210 ~~l~~i~~~-~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~-H~~~~e~p~---~~~~~i~~fl~~~ 277 (282)
..+.++ . +|+++++|.+|..+|......+.+... ..+...++++ |......+. +..+.+.+|+.+.
T Consensus 225 ~~~~~i--~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 225 DDAEKI--SPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhHhhc--CCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 334444 4 799999999999999888887765433 3567788888 997764433 6788888888764
No 178
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.74 E-value=0.019 Score=43.39 Aligned_cols=22 Identities=14% Similarity=0.220 Sum_probs=19.3
Q ss_pred CCceEEEcccHHHHHHHHHHHh
Q 023416 74 ESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
..++++.|||+||.+|..++..
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 6789999999999999987763
No 179
>PLN02571 triacylglycerol lipase
Probab=95.66 E-value=0.021 Score=46.45 Aligned_cols=39 Identities=23% Similarity=0.194 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 53 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 53 ~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
+++..++..+++....+ ..++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e----~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDE----EISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcc----cccEEEeccchHHHHHHHHHHH
Confidence 44556677777665421 3478999999999999988764
No 180
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.34 E-value=0.042 Score=40.29 Aligned_cols=61 Identities=8% Similarity=0.062 Sum_probs=43.4
Q ss_pred eEEEEecCCCCCCCC-----CCC----CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 30 WRATIVDWPGLGYSD-----RPK----MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~-----~~~----~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
.+|++|=+|=..... ... ......|..+....++++... |.+++|+|||-|+.+..++..+
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~-----GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNN-----GRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCC-----CCCEEEEEeChHHHHHHHHHHH
Confidence 678888665332111 111 334566777777888888864 8899999999999999998774
No 181
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.28 E-value=0.048 Score=40.91 Aligned_cols=36 Identities=11% Similarity=0.108 Sum_probs=27.3
Q ss_pred CCceEEEcccHHHHHHHHHHHh----CCCcccceeeecCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKK----NLVKPTAIAAVAPT 109 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~----~~~~v~~lvl~~p~ 109 (282)
..++++.|||.||.+|...+.. ...+|.++...+++
T Consensus 83 ~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 83 PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 3469999999999999988774 23467777766653
No 182
>PLN02454 triacylglycerol lipase
Probab=95.25 E-value=0.026 Score=45.87 Aligned_cols=20 Identities=30% Similarity=0.331 Sum_probs=17.9
Q ss_pred ceEEEcccHHHHHHHHHHHh
Q 023416 76 DLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 76 ~~~l~G~s~G~~~a~~~~~~ 95 (282)
++++.|||+||.+|+..|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 59999999999999998853
No 183
>PLN02408 phospholipase A1
Probab=95.19 E-value=0.038 Score=44.33 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=26.3
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
..+.+..+++....+ ..++++.|||+||.+|...+..
T Consensus 184 Vl~eI~~ll~~y~~~----~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDE----PLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCC----CceEEEeccchHHHHHHHHHHH
Confidence 345556666655421 3469999999999999988763
No 184
>COG4099 Predicted peptidase [General function prediction only]
Probab=95.15 E-value=0.082 Score=40.73 Aligned_cols=43 Identities=16% Similarity=-0.014 Sum_probs=36.5
Q ss_pred hhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 63 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 63 i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
.++..++ ...+++.|.|+||+-++.++.++|+.+.+.++++..
T Consensus 261 as~ynID----~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 261 ASTYNID----RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred hhccCcc----cceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 3444543 568999999999999999999999999999999864
No 185
>PLN02324 triacylglycerol lipase
Probab=95.02 E-value=0.045 Score=44.52 Aligned_cols=37 Identities=16% Similarity=0.200 Sum_probs=26.4
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
+.+.+..+++....+ ..++++.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp~e----~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNE----EISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCC----CceEEEecCcHHHHHHHHHHHH
Confidence 344566666655421 3479999999999999998863
No 186
>PLN02162 triacylglycerol lipase
Probab=95.01 E-value=0.045 Score=45.08 Aligned_cols=34 Identities=9% Similarity=0.181 Sum_probs=25.1
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
+.+.+.+++.... ..++++.|||+||.+|..++.
T Consensus 264 I~~~L~~lL~k~p------~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNK------NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCC------CceEEEEecChHHHHHHHHHH
Confidence 3445555555543 678999999999999998765
No 187
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=94.79 E-value=0.053 Score=46.21 Aligned_cols=85 Identities=12% Similarity=0.068 Sum_probs=53.4
Q ss_pred HHHHHhhcCCCeEEEEecCC----CCCCCCCC--CCCCchHHHHH---HHHHHhhCCCCCCcCCCCceEEEcccHHHHHH
Q 023416 19 QDIVQRVGKVNWRATIVDWP----GLGYSDRP--KMDYNADVMEK---FVVDLINAPDSPVSSSESDLVIFGGGHAATLT 89 (282)
Q Consensus 19 ~~L~~~~~~~g~~vi~~D~~----G~G~S~~~--~~~~~~~~~~~---~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a 89 (282)
..|+...+ |+-|+.+++| |++.+... ..++.+.|... .+.+-|+..+.+ ..+|.|+|+|.||..+
T Consensus 117 ~~~~~~~~--~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd----~~~v~~~G~SaG~~~~ 190 (493)
T cd00312 117 DGLAREGD--NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGD----PDSVTIFGESAGGASV 190 (493)
T ss_pred HHHHhcCC--CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCC----cceEEEEeecHHHHHh
Confidence 45554410 3899999999 44433221 12333444433 344555566643 5689999999999999
Q ss_pred HHHHHh--CCCcccceeeecCC
Q 023416 90 VRAAKK--NLVKPTAIAAVAPT 109 (282)
Q Consensus 90 ~~~~~~--~~~~v~~lvl~~p~ 109 (282)
..+... .+..+.++|++++.
T Consensus 191 ~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 191 SLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred hhHhhCcchhHHHHHHhhhcCC
Confidence 887764 34467888888764
No 188
>PLN00413 triacylglycerol lipase
Probab=94.74 E-value=0.057 Score=44.62 Aligned_cols=35 Identities=9% Similarity=0.246 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 54 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 54 ~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
.+.+.+.++++... ..++++.|||+||.+|..++.
T Consensus 269 ~i~~~Lk~ll~~~p------~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNP------TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCC------CCeEEEEecCHHHHHHHHHHH
Confidence 44556677776654 678999999999999998875
No 189
>PLN02802 triacylglycerol lipase
Probab=94.63 E-value=0.062 Score=44.78 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=26.0
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
..+.+..+++....+ ..++++.|||+||.+|...+..
T Consensus 314 Vl~eV~~Ll~~Y~~e----~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGE----ELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCC----cceEEEeccchHHHHHHHHHHH
Confidence 344556666655421 3478999999999999988763
No 190
>PLN02310 triacylglycerol lipase
Probab=94.38 E-value=0.078 Score=43.14 Aligned_cols=39 Identities=21% Similarity=0.143 Sum_probs=26.0
Q ss_pred HHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 54 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 54 ~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
+..+.+..+++...... ...++++.|||+||.+|+..+.
T Consensus 190 qVl~eV~~L~~~y~~~~--e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKG--EEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHhhcccC--CcceEEEEcccHHHHHHHHHHH
Confidence 34445566665442110 0357999999999999998875
No 191
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=94.36 E-value=0.043 Score=41.14 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=64.2
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCe------EEEEecCCCC----CCCCC----CC-------CCCchHHHHHHHH
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNW------RATIVDWPGL----GYSDR----PK-------MDYNADVMEKFVV 60 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~------~vi~~D~~G~----G~S~~----~~-------~~~~~~~~~~~l~ 60 (282)
|+|..+ +......++..|.+. + =++.+|--|- |.=++ |- ..-+..++...+.
T Consensus 51 IhGsgG--~asS~~~Mv~ql~~~-----~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 51 IHGSGG--TASSLNGMVNQLLPD-----YKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred EecCCC--ChhHHHHHHHHhhhc-----ccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 344443 344566788888877 4 2455666651 11111 11 2346677788888
Q ss_pred HHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhC-----CCcccceeeecCC
Q 023416 61 DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAPT 109 (282)
Q Consensus 61 ~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~-----~~~v~~lvl~~p~ 109 (282)
.++..|+..+. -..+.++||||||.-...|...+ .-.++++|.++.+
T Consensus 124 ~~msyL~~~Y~--i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 124 KAMSYLQKHYN--IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHHHhcC--CceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 88887775544 66788899999999999888742 2237788888653
No 192
>PLN02934 triacylglycerol lipase
Probab=94.29 E-value=0.075 Score=44.31 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 54 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 54 ~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
.....+.+++++.. ..++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p------~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHK------NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCC------CCeEEEeccccHHHHHHHHHH
Confidence 35556666666654 678999999999999998874
No 193
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=93.91 E-value=0.31 Score=39.39 Aligned_cols=75 Identities=11% Similarity=0.175 Sum_probs=51.0
Q ss_pred eEEEEecCCCCCCCCC-CCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh-----CCCcccce
Q 023416 30 WRATIVDWPGLGYSDR-PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK-----NLVKPTAI 103 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~-----~~~~v~~l 103 (282)
..++++|+.-...-+. ....+.+.+.++-...+++..+ ...++|||-|.||.+++.+.+. .....+++
T Consensus 155 ~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G------~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~ 228 (374)
T PF10340_consen 155 VSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEG------NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSA 228 (374)
T ss_pred CeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccC------CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCcee
Confidence 5788888764430001 1134556677777777776666 6789999999999999988661 22346789
Q ss_pred eeecCCC
Q 023416 104 AAVAPTW 110 (282)
Q Consensus 104 vl~~p~~ 110 (282)
||++|-.
T Consensus 229 iLISPWv 235 (374)
T PF10340_consen 229 ILISPWV 235 (374)
T ss_pred EEECCCc
Confidence 9999853
No 194
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.75 E-value=0.12 Score=43.23 Aligned_cols=39 Identities=23% Similarity=0.147 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 54 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 54 ~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
+..+++..+++...... ...++++.|||+||.+|+..|.
T Consensus 299 QVl~eV~rLv~~Yk~~g--e~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRG--EEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHhccccC--CcceEEEeccCHHHHHHHHHHH
Confidence 34456666666553110 0357999999999999998875
No 195
>PLN02761 lipase class 3 family protein
Probab=93.74 E-value=0.12 Score=43.28 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=25.4
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
+...+..+++...........++++.|||+||.+|...+.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3445555555442100001457999999999999998875
No 196
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.69 E-value=0.12 Score=41.42 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 53 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 53 ~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
..+.+++..+++... ..++.+.|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~------~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP------NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC------CcEEEEecCChHHHHHHHHHHH
Confidence 466677777777776 8899999999999999998873
No 197
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.56 E-value=0.14 Score=43.86 Aligned_cols=83 Identities=17% Similarity=0.122 Sum_probs=60.9
Q ss_pred HHHHhhcCCCeEEEEecCCCCCCCCC--------CCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHH
Q 023416 20 DIVQRVGKVNWRATIVDWPGLGYSDR--------PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVR 91 (282)
Q Consensus 20 ~L~~~~~~~g~~vi~~D~~G~G~S~~--------~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~ 91 (282)
.|.++ |+---.-.-||=|.=.. ....-|++++.+....+++.=-.. ...++++|+|.||+++..
T Consensus 472 SLlDR----GfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~----~~~i~a~GGSAGGmLmGa 543 (682)
T COG1770 472 SLLDR----GFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTS----PDRIVAIGGSAGGMLMGA 543 (682)
T ss_pred eeecC----ceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCC----ccceEEeccCchhHHHHH
Confidence 45555 66554556677554321 125568899998888888754322 457999999999999999
Q ss_pred HHHhCCCcccceeeecCCC
Q 023416 92 AAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 92 ~~~~~~~~v~~lvl~~p~~ 110 (282)
.+...|+.+.++|+-.|..
T Consensus 544 v~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 544 VANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred HHhhChhhhhheeecCCcc
Confidence 9999999999999988753
No 198
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.37 E-value=0.14 Score=40.86 Aligned_cols=80 Identities=15% Similarity=0.141 Sum_probs=48.9
Q ss_pred eEEEEecCC-CCCCCCCCC-CCCch-HHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHHHHHHHHh----C-----
Q 023416 30 WRATIVDWP-GLGYSDRPK-MDYNA-DVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATLTVRAAKK----N----- 96 (282)
Q Consensus 30 ~~vi~~D~~-G~G~S~~~~-~~~~~-~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~a~~~~~~----~----- 96 (282)
..++-+|.| |-|.|-... ..++. +..++|+..++...-..... ...+++|.|-|.||.++-.++.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 468999998 888885422 22222 23345555555443211111 27899999999999988877762 1
Q ss_pred -CCcccceeeecCC
Q 023416 97 -LVKPTAIAAVAPT 109 (282)
Q Consensus 97 -~~~v~~lvl~~p~ 109 (282)
+..++++++-+|.
T Consensus 82 ~~inLkGi~IGNg~ 95 (319)
T PLN02213 82 PPINLQGYMLGNPV 95 (319)
T ss_pred CceeeeEEEeCCCC
Confidence 2356677776653
No 199
>PLN02753 triacylglycerol lipase
Probab=93.34 E-value=0.14 Score=42.99 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=25.7
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
....+..+++....+. ....++++.|||+||.+|...|.
T Consensus 293 Vl~eVkrLl~~Y~~e~-~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 293 ILTEVKRLVEEHGDDD-DSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHccccc-CCCceEEEEccCHHHHHHHHHHH
Confidence 3444555555443100 01468999999999999999875
No 200
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=93.15 E-value=0.24 Score=40.28 Aligned_cols=36 Identities=14% Similarity=0.008 Sum_probs=31.2
Q ss_pred CceEEEcccHHHHHHHHHHHhCCCcccceeeecCCC
Q 023416 75 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~ 110 (282)
-+++.+|+|.||.+|...+.-.|-.+++++=-++..
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 599999999999999999998899998888766543
No 201
>KOG3101 consensus Esterase D [General function prediction only]
Probab=93.10 E-value=0.11 Score=37.85 Aligned_cols=36 Identities=25% Similarity=0.244 Sum_probs=29.8
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
..++-+.||||||.=|+..+.++|.+.+++-..+|.
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred chhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 446788999999999998888888888887777663
No 202
>PLN02719 triacylglycerol lipase
Probab=92.75 E-value=0.19 Score=42.02 Aligned_cols=21 Identities=24% Similarity=0.290 Sum_probs=18.6
Q ss_pred CCceEEEcccHHHHHHHHHHH
Q 023416 74 ESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~ 94 (282)
..++++.|||+||.+|...|.
T Consensus 297 ~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred cceEEEecCcHHHHHHHHHHH
Confidence 358999999999999999875
No 203
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=92.64 E-value=0.084 Score=40.66 Aligned_cols=102 Identities=8% Similarity=-0.006 Sum_probs=54.9
Q ss_pred CCCcccCcc-cccchHHHHHHHHHhhcCCCeEEEEecCCCCCCC-CCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCce
Q 023416 1 MIPTISDVS-TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS-DRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDL 77 (282)
Q Consensus 1 ~~p~~~~~s-s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S-~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 77 (282)
|.+||.+.. +...+..+.+.+.+.. .|--|+.+++ |-|.+ +... .--++.+.++.+.+.++.... . ..-+
T Consensus 10 iwHGmGD~~~~~~~m~~i~~~i~~~~--PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~--L--~~G~ 82 (279)
T PF02089_consen 10 IWHGMGDSCCNPSSMGSIKELIEEQH--PGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPE--L--ANGF 82 (279)
T ss_dssp EE--TT--S--TTTHHHHHHHHHHHS--TT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG--G--TT-E
T ss_pred EEEcCccccCChhHHHHHHHHHHHhC--CCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChh--h--hcce
Confidence 357888654 4456777766666652 3567777777 22211 1110 113445556666666554221 1 3458
Q ss_pred EEEcccHHHHHHHHHHHhCCC-cccceeeecCC
Q 023416 78 VIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPT 109 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~~~~~~~-~v~~lvl~~p~ 109 (282)
+++|+|-||.+...+.++.+. .|..+|.+++.
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 899999999999999998764 58899998765
No 204
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=92.48 E-value=1.5 Score=37.54 Aligned_cols=88 Identities=17% Similarity=0.068 Sum_probs=60.8
Q ss_pred chHHHHHHHHHhhcCCCeEEEEecCCCCCCCCC--------CCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccH
Q 023416 13 EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR--------PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGH 84 (282)
Q Consensus 13 ~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~--------~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~ 84 (282)
.|.......-++ |...+.-.+||=|+=.. .+..-.++++.+.+++++++=-.. .+++-+.|+|-
T Consensus 438 ~fs~~~~~WLer----Gg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgits----pe~lgi~GgSN 509 (648)
T COG1505 438 RFSGSRKLWLER----GGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITS----PEKLGIQGGSN 509 (648)
T ss_pred ccchhhHHHHhc----CCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCC----HHHhhhccCCC
Confidence 344444555566 77778889999765321 113446677777777777643211 45777899999
Q ss_pred HHHHHHHHHHhCCCcccceeeecC
Q 023416 85 AATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 85 G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
||++......++|+.+.+++.--|
T Consensus 510 GGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 510 GGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred CceEEEeeeccChhhhCceeeccc
Confidence 999999888899999888877655
No 205
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=92.40 E-value=0.19 Score=36.36 Aligned_cols=89 Identities=13% Similarity=0.101 Sum_probs=45.7
Q ss_pred HHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh-
Q 023416 17 VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK- 95 (282)
Q Consensus 17 ~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~- 95 (282)
+.+.|.+..+.....+..+++|--..-. ...-+...=+..+...++.....- ...+++|+|+|.|+.++......
T Consensus 27 ~~~~l~~~~g~~~~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~ 102 (179)
T PF01083_consen 27 FADALQAQPGGTSVAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGD 102 (179)
T ss_dssp HHHHHHHHCTTCEEEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHT
T ss_pred HHHHHHhhcCCCeeEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhc
Confidence 4445555421112556666666432211 111233333444444444321100 16789999999999999988654
Q ss_pred -----CCCcccceeeecCC
Q 023416 96 -----NLVKPTAIAAVAPT 109 (282)
Q Consensus 96 -----~~~~v~~lvl~~p~ 109 (282)
...+|.++++++-+
T Consensus 103 ~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 103 GLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp TSSHHHHHHEEEEEEES-T
T ss_pred cCChhhhhhEEEEEEecCC
Confidence 34568888888643
No 206
>PLN02209 serine carboxypeptidase
Probab=92.04 E-value=0.63 Score=38.91 Aligned_cols=80 Identities=10% Similarity=0.057 Sum_probs=50.7
Q ss_pred eEEEEec-CCCCCCCCCCC--CCCchHHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHHHHHHHHh----C-----
Q 023416 30 WRATIVD-WPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATLTVRAAKK----N----- 96 (282)
Q Consensus 30 ~~vi~~D-~~G~G~S~~~~--~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~a~~~~~~----~----- 96 (282)
..++-+| ..|.|.|-... ...+-++.++++.+++...-..... ...+++|+|.|.||.++-.++.. .
T Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 118 ANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 7899999 77899985322 2222334456666666544222111 25689999999999987777652 1
Q ss_pred -CCcccceeeecCC
Q 023416 97 -LVKPTAIAAVAPT 109 (282)
Q Consensus 97 -~~~v~~lvl~~p~ 109 (282)
...++++++.++.
T Consensus 198 ~~inl~Gi~igng~ 211 (437)
T PLN02209 198 PPINLQGYVLGNPI 211 (437)
T ss_pred CceeeeeEEecCcc
Confidence 2456788887764
No 207
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=91.91 E-value=5 Score=31.34 Aligned_cols=83 Identities=12% Similarity=0.192 Sum_probs=55.7
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEc-----ccHHHHHH
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFG-----GGHAATLT 89 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G-----~s~G~~~a 89 (282)
+..++.|-.. ..|+.-|+----.-+.....+.++++.+.+.+++..++.. +++++ --.=+.++
T Consensus 121 R~TV~alLp~-----~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-------~hv~aVCQP~vPvLAAis 188 (415)
T COG4553 121 RGTVEALLPY-----HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-------AHVMAVCQPTVPVLAAIS 188 (415)
T ss_pred HHHHHHhccc-----cceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-------CcEEEEecCCchHHHHHH
Confidence 4456666666 7889989864333333346789999999999999999743 33332 22334455
Q ss_pred HHHHHhCCCcccceeeecCC
Q 023416 90 VRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 90 ~~~~~~~~~~v~~lvl~~p~ 109 (282)
+..+...|....++++++.+
T Consensus 189 LM~~~~~p~~PssMtlmGgP 208 (415)
T COG4553 189 LMEEDGDPNVPSSMTLMGGP 208 (415)
T ss_pred HHHhcCCCCCCceeeeecCc
Confidence 55555677778899999654
No 208
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.86 E-value=0.66 Score=37.12 Aligned_cols=58 Identities=9% Similarity=0.021 Sum_probs=43.1
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhcc------------------------CC-ceEEEeCCc-ccCCCCChHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAK------------------------GV-TKFVEVPGA-LLPQEEYPAMVAQELY 271 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~-H~~~~e~p~~~~~~i~ 271 (282)
.+++||..|+.|.+++.-..+.+.+.. .+ .+++.+.++ |+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 579999999999887764444432211 12 556777788 9996 59999999999
Q ss_pred HHHHh
Q 023416 272 QFLQQ 276 (282)
Q Consensus 272 ~fl~~ 276 (282)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 209
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=91.69 E-value=0.2 Score=40.37 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=51.9
Q ss_pred cccchHH----HHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHH
Q 023416 10 TVEEWRL----VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHA 85 (282)
Q Consensus 10 s~~~w~~----~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G 85 (282)
.-..|+. +.++|++. |+.|+.+|-.=|=.|++ |.+..++|+..+|+.....-. .++++|+|+|+|
T Consensus 268 GDGGWr~lDk~v~~~l~~~----gvpVvGvdsLRYfW~~r-----tPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfG 336 (456)
T COG3946 268 GDGGWRDLDKEVAEALQKQ----GVPVVGVDSLRYFWSER-----TPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFG 336 (456)
T ss_pred cCCchhhhhHHHHHHHHHC----CCceeeeehhhhhhccC-----CHHHHHHHHHHHHHHHHHhhC--cceEEEEeeccc
Confidence 3456765 45566666 99999999877777765 446778888888765431111 678999999999
Q ss_pred HHHHHHHHH
Q 023416 86 ATLTVRAAK 94 (282)
Q Consensus 86 ~~~a~~~~~ 94 (282)
+-+.-..-.
T Consensus 337 ADvlP~~~n 345 (456)
T COG3946 337 ADVLPFAYN 345 (456)
T ss_pred chhhHHHHH
Confidence 987655444
No 210
>PLN02847 triacylglycerol lipase
Probab=91.64 E-value=0.33 Score=41.52 Aligned_cols=21 Identities=10% Similarity=0.061 Sum_probs=19.1
Q ss_pred CCceEEEcccHHHHHHHHHHH
Q 023416 74 ESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~ 94 (282)
+.+++++|||+||.+|..++.
T Consensus 250 dYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred CCeEEEeccChHHHHHHHHHH
Confidence 778999999999999998876
No 211
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=91.62 E-value=0.34 Score=37.60 Aligned_cols=37 Identities=8% Similarity=0.101 Sum_probs=33.1
Q ss_pred CCCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 73 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 73 ~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
.+..-+|+|.|+||.+++..+.++|+.+..++.-+|.
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 4666889999999999999999999999999888874
No 212
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=91.45 E-value=0.95 Score=37.84 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=51.5
Q ss_pred eEEEEecCC-CCCCCCC-CC--CCCchHHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHHHHHHHHh---------
Q 023416 30 WRATIVDWP-GLGYSDR-PK--MDYNADVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATLTVRAAKK--------- 95 (282)
Q Consensus 30 ~~vi~~D~~-G~G~S~~-~~--~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~a~~~~~~--------- 95 (282)
-.++-+|.| |-|.|=. .. ...+-+..++|...|+...-.+... ..++++|.|-|.+|.+.-.+|+.
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~ 197 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCC 197 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccccc
Confidence 467888877 6777742 11 1234455566766666544333322 47899999999999888777761
Q ss_pred -CCCcccceeeecCC
Q 023416 96 -NLVKPTAIAAVAPT 109 (282)
Q Consensus 96 -~~~~v~~lvl~~p~ 109 (282)
.+..++++++-+|.
T Consensus 198 ~~~iNLkG~~IGNg~ 212 (454)
T KOG1282|consen 198 KPNINLKGYAIGNGL 212 (454)
T ss_pred CCcccceEEEecCcc
Confidence 13456777776664
No 213
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=91.10 E-value=0.28 Score=40.19 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=24.6
Q ss_pred CceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 75 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
.++.++|||+||..++..+.+. .+++..|+++|.
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES--
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCc
Confidence 3588999999999999877644 568888988873
No 214
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=91.01 E-value=0.95 Score=37.86 Aligned_cols=58 Identities=9% Similarity=0.021 Sum_probs=43.9
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhcc------------------------CC-ceEEEeCCc-ccCCCCChHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAK------------------------GV-TKFVEVPGA-LLPQEEYPAMVAQELY 271 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~-H~~~~e~p~~~~~~i~ 271 (282)
.+++||..|+.|.+++....+.+.+.. .+ .+++.+.++ |+++ .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 579999999999888765555442211 12 556778888 9996 59999999999
Q ss_pred HHHHh
Q 023416 272 QFLQQ 276 (282)
Q Consensus 272 ~fl~~ 276 (282)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 215
>COG0627 Predicted esterase [General function prediction only]
Probab=90.81 E-value=0.13 Score=40.77 Aligned_cols=34 Identities=12% Similarity=0.028 Sum_probs=30.5
Q ss_pred ceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 76 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 76 ~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
...++||||||.=|+.+|.++|+++..+...+|.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 5677999999999999999999999988888775
No 216
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=90.76 E-value=0.49 Score=40.64 Aligned_cols=77 Identities=18% Similarity=0.123 Sum_probs=58.4
Q ss_pred CeEEEEecCCCCCC---CCCCC-----CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcc
Q 023416 29 NWRATIVDWPGLGY---SDRPK-----MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKP 100 (282)
Q Consensus 29 g~~vi~~D~~G~G~---S~~~~-----~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v 100 (282)
|+-....|.||=|. +.... ..-+++++..-.+-+++.=-.. .++..+.|+|-||.++......+|+.+
T Consensus 499 G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~----~~kL~i~G~SaGGlLvga~iN~rPdLF 574 (712)
T KOG2237|consen 499 GWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQ----PSKLAIEGGSAGGLLVGACINQRPDLF 574 (712)
T ss_pred ceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCC----ccceeEecccCccchhHHHhccCchHh
Confidence 78888889999654 32221 4557888888888777643221 567889999999999999999999999
Q ss_pred cceeeecCC
Q 023416 101 TAIAAVAPT 109 (282)
Q Consensus 101 ~~lvl~~p~ 109 (282)
.++|+-.|.
T Consensus 575 ~avia~Vpf 583 (712)
T KOG2237|consen 575 GAVIAKVPF 583 (712)
T ss_pred hhhhhcCcc
Confidence 988886663
No 217
>PLN02209 serine carboxypeptidase
Probab=90.71 E-value=0.4 Score=40.05 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=44.4
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhcc------------------------CC-ceEEEeCCc-ccCCCCChHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAK------------------------GV-TKFVEVPGA-LLPQEEYPAMVAQELY 271 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~-H~~~~e~p~~~~~~i~ 271 (282)
.+++|+..|+.|.+++....+.+.+.. .+ .+++.+.++ |+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 579999999999888765555443211 22 556778888 9996 59999999999
Q ss_pred HHHHh
Q 023416 272 QFLQQ 276 (282)
Q Consensus 272 ~fl~~ 276 (282)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 218
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.61 E-value=1.5 Score=33.03 Aligned_cols=63 Identities=17% Similarity=0.251 Sum_probs=41.3
Q ss_pred CeEEEEecCCC-CCC-CCC--CCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 29 NWRATIVDWPG-LGY-SDR--PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 29 g~~vi~~D~~G-~G~-S~~--~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
|+.+..++.|. ++- +.. ....-|..+=++.+.+.|+..... +.+++++|+|.|+.++.....+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~----~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAA----GGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccC----CCCEEEEEECHHHHHHHHHHHH
Confidence 68888888887 111 111 123445555566666666653222 7889999999999999987663
No 219
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=90.50 E-value=2.9 Score=26.91 Aligned_cols=89 Identities=11% Similarity=0.077 Sum_probs=56.6
Q ss_pred CcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCch-HHHHHHHHHHhhCCCCCCcCCCCceEEEcccHH
Q 023416 7 DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNA-DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHA 85 (282)
Q Consensus 7 ~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~-~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G 85 (282)
+.|.|..|..+.+.+..+ ||..=.+.++..|.+...-..-.. +.=...+..+++..- ..+++++|=|-=
T Consensus 6 S~SPwnly~~l~~Fl~~~----~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP------~~kfiLIGDsgq 75 (100)
T PF09949_consen 6 SNSPWNLYPFLRDFLRRN----GFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFP------ERKFILIGDSGQ 75 (100)
T ss_pred cCCHHHHHHHHHHHHHhc----CCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCC------CCcEEEEeeCCC
Confidence 345566676777777766 788888888888766432111111 234556777777776 778999995532
Q ss_pred --HHHHHHHHHhCCCcccceee
Q 023416 86 --ATLTVRAAKKNLVKPTAIAA 105 (282)
Q Consensus 86 --~~~a~~~~~~~~~~v~~lvl 105 (282)
-.+-...+.++|++|.++.+
T Consensus 76 ~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 76 HDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred cCHHHHHHHHHHCCCCEEEEEE
Confidence 23334456788998887654
No 220
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.87 E-value=2.2 Score=31.49 Aligned_cols=74 Identities=9% Similarity=0.118 Sum_probs=44.3
Q ss_pred CeEEEEecCC---CCCCCCC-CC--CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCc--c
Q 023416 29 NWRATIVDWP---GLGYSDR-PK--MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK--P 100 (282)
Q Consensus 29 g~~vi~~D~~---G~G~S~~-~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~--v 100 (282)
||.|++...- -+-.+.. |. .....+...-....++.... ..++.++.||.||...+.+..+.|.. |
T Consensus 144 Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~------~~sv~vvahsyGG~~t~~l~~~f~~d~~v 217 (297)
T KOG3967|consen 144 GYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAK------AESVFVVAHSYGGSLTLDLVERFPDDESV 217 (297)
T ss_pred CCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccC------cceEEEEEeccCChhHHHHHHhcCCccce
Confidence 8999988643 1222222 21 11122222223344444444 78999999999999999999887754 4
Q ss_pred cceeeecC
Q 023416 101 TAIAAVAP 108 (282)
Q Consensus 101 ~~lvl~~p 108 (282)
.++.+-++
T Consensus 218 ~aialTDs 225 (297)
T KOG3967|consen 218 FAIALTDS 225 (297)
T ss_pred EEEEeecc
Confidence 44555443
No 221
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=89.85 E-value=0.71 Score=37.06 Aligned_cols=36 Identities=8% Similarity=0.100 Sum_probs=27.3
Q ss_pred CCceEEEcccHHHHHHHHHHH----h-CCCcccceeeecCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAK----K-NLVKPTAIAAVAPT 109 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~----~-~~~~v~~lvl~~p~ 109 (282)
..|+.|+|||+|+.+...... + ....|+.+++++.+
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 678999999999999887654 2 12347889998754
No 222
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=89.77 E-value=0.59 Score=39.05 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=48.3
Q ss_pred eEEEEec-CCCCCCCCCCC-CCCch-HHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHHHHHHHHh----------
Q 023416 30 WRATIVD-WPGLGYSDRPK-MDYNA-DVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATLTVRAAKK---------- 95 (282)
Q Consensus 30 ~~vi~~D-~~G~G~S~~~~-~~~~~-~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~a~~~~~~---------- 95 (282)
..++-+| ..|.|.|-... ..++. .+.++++..++...-..... ...+++|.|.|.||.++-.++..
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 7899999 77899985432 22221 12334555555433211111 26789999999999987777652
Q ss_pred CCCcccceeeecC
Q 023416 96 NLVKPTAIAAVAP 108 (282)
Q Consensus 96 ~~~~v~~lvl~~p 108 (282)
.+..++++++-+|
T Consensus 196 ~~inLkGi~iGNg 208 (433)
T PLN03016 196 PPINLQGYMLGNP 208 (433)
T ss_pred CcccceeeEecCC
Confidence 1345677777665
No 223
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=87.24 E-value=0.17 Score=41.00 Aligned_cols=75 Identities=11% Similarity=-0.067 Sum_probs=60.7
Q ss_pred eEEEEecCCCCCCCCCCC---CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeee
Q 023416 30 WRATIVDWPGLGYSDRPK---MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAV 106 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~ 106 (282)
-.-+.+..|-||.|.+.+ ...++.+-+.|...++++++.-+ ..+++-.|.|=||+.++.+-.-+|..|++.|--
T Consensus 89 ~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY---~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 89 GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY---PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc---cCCceecCcCCCceeEEEEeeeCCCCCCeeeee
Confidence 445889999999997633 45789999999999998885211 457888999999999999888899999987765
Q ss_pred c
Q 023416 107 A 107 (282)
Q Consensus 107 ~ 107 (282)
.
T Consensus 166 V 166 (448)
T PF05576_consen 166 V 166 (448)
T ss_pred e
Confidence 4
No 224
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=86.56 E-value=0.34 Score=40.39 Aligned_cols=80 Identities=13% Similarity=0.017 Sum_probs=51.5
Q ss_pred eEEEEec-CCCCCCCCC--CCCCCchHHHHHHHHHHhhCCCCCC---cCCCCceEEEcccHHHHHHHHHHHhCCC---cc
Q 023416 30 WRATIVD-WPGLGYSDR--PKMDYNADVMEKFVVDLINAPDSPV---SSSESDLVIFGGGHAATLTVRAAKKNLV---KP 100 (282)
Q Consensus 30 ~~vi~~D-~~G~G~S~~--~~~~~~~~~~~~~l~~~i~~l~~~~---~~~~~~~~l~G~s~G~~~a~~~~~~~~~---~v 100 (282)
-.++-+| .-|-|.|.. ....-++....+|+..+.+.+-... .....+.+|+|-|.||..+-.+|..-.+ ..
T Consensus 147 adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~ 226 (498)
T COG2939 147 ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIAL 226 (498)
T ss_pred CceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcccc
Confidence 5789999 778998874 3344455555666665554332110 1125689999999999999998874222 35
Q ss_pred cceeeecCC
Q 023416 101 TAIAAVAPT 109 (282)
Q Consensus 101 ~~lvl~~p~ 109 (282)
++++++++.
T Consensus 227 ~~~~nlssv 235 (498)
T COG2939 227 NGNVNLSSV 235 (498)
T ss_pred CCceEeeee
Confidence 666666553
No 225
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=86.42 E-value=1.3 Score=32.44 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=55.8
Q ss_pred CCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCC--------CCC----------CCCCCCCchHHHHHHHHHHh
Q 023416 2 IPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL--------GYS----------DRPKMDYNADVMEKFVVDLI 63 (282)
Q Consensus 2 ~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~--------G~S----------~~~~~~~~~~~~~~~l~~~i 63 (282)
|+|+.+ +...|..+++.|.-. .-..|+|--|=. +-- +.+...-++...++.+.+++
T Consensus 9 LHglGD--sg~~~~~~~~~l~l~----NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 9 LHGLGD--SGSGWAQFLKQLPLP----NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred EecCCC--CCccHHHHHHcCCCC----CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 566654 456677766665543 356666633211 110 00112234455566666666
Q ss_pred hCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeec
Q 023416 64 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 64 ~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~ 107 (282)
++.-.. .-....+.+-|.|+||.+++..+..++..+.++.-..
T Consensus 83 ~~e~~~-Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s 125 (206)
T KOG2112|consen 83 DNEPAN-GIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALS 125 (206)
T ss_pred HHHHHc-CCCccceeEcccCchHHHHHHHHhccccccceeeccc
Confidence 544211 0014568889999999999999988766666555443
No 226
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=85.66 E-value=1.8 Score=35.39 Aligned_cols=64 Identities=16% Similarity=0.098 Sum_probs=41.6
Q ss_pred HHHHhhcccCCccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc-ccCCC-----CChHHHHHHHHHHHH
Q 023416 208 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQE-----EYPAMVAQELYQFLQ 275 (282)
Q Consensus 208 ~~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~-----e~p~~~~~~i~~fl~ 275 (282)
+..-+++- .-.+++|+|++|++...... +.+...++.+.+.||+ |...+ ++.++....|.+|-.
T Consensus 343 I~~Wvr~~--~~rmlFVYG~nDPW~A~~f~--l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 343 IDRWVRNN--GPRMLFVYGENDPWSAEPFR--LGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHHHHhC--CCeEEEEeCCCCCcccCccc--cCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 33444444 67889999999998653322 2233456778899999 97443 344566777777743
No 227
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.05 E-value=0.81 Score=39.03 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=16.7
Q ss_pred CCceEEEcccHHHHHHHHHH
Q 023416 74 ESDLVIFGGGHAATLTVRAA 93 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~ 93 (282)
+.+++.+||||||.++-...
T Consensus 525 ~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred CCceEEEecccchHHHHHHH
Confidence 57899999999998887654
No 228
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=83.98 E-value=3.3 Score=30.16 Aligned_cols=59 Identities=15% Similarity=0.137 Sum_probs=42.3
Q ss_pred CccEEEEecCCCCCCCHHHHH---HHHhccCCc--eEEEeCCc-ccCCCCC---hHHHHHHHHHHHHh
Q 023416 218 KLPLLVVSTEGSPRRSKAEME---ALKGAKGVT--KFVEVPGA-LLPQEEY---PAMVAQELYQFLQQ 276 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~---~~~~~~~~~--~~~~~~~~-H~~~~e~---p~~~~~~i~~fl~~ 276 (282)
+++.+-|-|+.|.++...... .+...+|.. .-++.+|+ |+-...- .+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 678888999999998875544 444444432 34677888 9955442 47899999999875
No 229
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=82.18 E-value=2.5 Score=31.04 Aligned_cols=55 Identities=16% Similarity=0.153 Sum_probs=37.6
Q ss_pred CccEEEEecCCCCCCCHHHHHHH----HhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEAL----KGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~----~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
..|++..||+.|+++|....+.. .......+++.+++- |..--+.- +.+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~----~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQEL----DDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHH----HHHHHHHHH
Confidence 46899999999999998766544 333444778899997 87554333 344455544
No 230
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=81.98 E-value=7.6 Score=28.75 Aligned_cols=51 Identities=18% Similarity=0.141 Sum_probs=39.0
Q ss_pred EEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccH----HHHHHHHHHHh
Q 023416 31 RATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGH----AATLTVRAAKK 95 (282)
Q Consensus 31 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~----G~~~a~~~~~~ 95 (282)
+|+..|.++. ..|+.+.+++.+.+++++. +.+++++|+|. |..++-+.+.+
T Consensus 79 ~V~~~~~~~~-------~~~~~e~~a~al~~~i~~~-------~p~lVL~~~t~~~~~grdlaprlAar 133 (202)
T cd01714 79 RAILVSDRAF-------AGADTLATAKALAAAIKKI-------GVDLILTGKQSIDGDTGQVGPLLAEL 133 (202)
T ss_pred EEEEEecccc-------cCCChHHHHHHHHHHHHHh-------CCCEEEEcCCcccCCcCcHHHHHHHH
Confidence 6666665543 3477889999999998876 46799999888 77888888775
No 231
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.35 E-value=3.2 Score=29.11 Aligned_cols=34 Identities=9% Similarity=-0.015 Sum_probs=25.4
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
-..+.++.+|||-.+|-+..+..+ +++.+.++.+
T Consensus 56 y~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 56 YRHIRLVAWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 345677999999999999887533 4577777765
No 232
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=81.21 E-value=3.6 Score=31.87 Aligned_cols=33 Identities=9% Similarity=0.138 Sum_probs=24.0
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
...+.|.|||+||.+|..+..++... .+.+-+|
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fglP--~VaFesP 307 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRFGLP--VVAFESP 307 (425)
T ss_pred CceEEEeccccchHHHHHhccccCCc--eEEecCc
Confidence 66789999999999999887664433 3444444
No 233
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=81.21 E-value=3.6 Score=31.87 Aligned_cols=33 Identities=9% Similarity=0.138 Sum_probs=24.0
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
...+.|.|||+||.+|..+..++... .+.+-+|
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fglP--~VaFesP 307 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRFGLP--VVAFESP 307 (425)
T ss_pred CceEEEeccccchHHHHHhccccCCc--eEEecCc
Confidence 66789999999999999887664433 3444444
No 234
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.09 E-value=9.3 Score=30.92 Aligned_cols=63 Identities=13% Similarity=0.153 Sum_probs=50.1
Q ss_pred CccEEEEecCCCCCCCHHHHHHHH----hccCCceEEEeCCc-ccCCCC-ChHHHHHHHHHHHHhhcCC
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEE-YPAMVAQELYQFLQQTFEP 280 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e-~p~~~~~~i~~fl~~~~~~ 280 (282)
..+.+.+++..|.+++....+++. +..-+++.+-+.++ |..|.. .|....+...+|+......
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 568899999999999998888773 23445666777888 998765 6999999999999886544
No 235
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=80.66 E-value=2.3 Score=35.64 Aligned_cols=85 Identities=16% Similarity=0.110 Sum_probs=54.7
Q ss_pred HHHHHHhhcCCC-eEEEEecCCC--CCCCC--------CCCCCCchHHHH---HHHHHHhhCCCCCCcCCCCceEEEccc
Q 023416 18 AQDIVQRVGKVN-WRATIVDWPG--LGYSD--------RPKMDYNADVME---KFVVDLINAPDSPVSSSESDLVIFGGG 83 (282)
Q Consensus 18 ~~~L~~~~~~~g-~~vi~~D~~G--~G~S~--------~~~~~~~~~~~~---~~l~~~i~~l~~~~~~~~~~~~l~G~s 83 (282)
-..|+++ | +-|+.+++|= +|.=+ ....+..+.|.+ +.+.+-|++.+.+ ...|.|+|.|
T Consensus 117 gs~La~~----g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGD----p~NVTl~GeS 188 (491)
T COG2272 117 GSALAAR----GDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGD----PQNVTLFGES 188 (491)
T ss_pred hHHHHhc----CCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCC----ccceEEeecc
Confidence 4678887 5 7888887762 22211 111223444443 4566778888865 5679999999
Q ss_pred HHHHHHHHHHH--hCCCcccceeeecCCC
Q 023416 84 HAATLTVRAAK--KNLVKPTAIAAVAPTW 110 (282)
Q Consensus 84 ~G~~~a~~~~~--~~~~~v~~lvl~~p~~ 110 (282)
-|++.++.+.. .....+.+.|+.++..
T Consensus 189 AGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 189 AGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred chHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 99998887654 2334577888888753
No 236
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=79.60 E-value=14 Score=29.99 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=41.6
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCce-EEEeCCc-ccCCCCChHHHHHHHHHHHHh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTK-FVEVPGA-LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~-H~~~~e~p~~~~~~i~~fl~~ 276 (282)
..|-.|+.|..|.+..+..+..+.+..|+.+ +..+|+. |..- +..+.+.+..|+.+
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~flnr 386 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLNR 386 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHHH
Confidence 8999999999998888788888887777765 6788888 8754 34455555555544
No 237
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=79.30 E-value=3.4 Score=35.69 Aligned_cols=85 Identities=12% Similarity=0.015 Sum_probs=52.2
Q ss_pred HHHHHHhhcCCCeEEEEecCC----CCCCCCCC--C-CCCchHHHHH---HHHHHhhCCCCCCcCCCCceEEEcccHHHH
Q 023416 18 AQDIVQRVGKVNWRATIVDWP----GLGYSDRP--K-MDYNADVMEK---FVVDLINAPDSPVSSSESDLVIFGGGHAAT 87 (282)
Q Consensus 18 ~~~L~~~~~~~g~~vi~~D~~----G~G~S~~~--~-~~~~~~~~~~---~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~ 87 (282)
...++.. +.-||.+.+| ||-.+... . .++.+.|... .+.+-|.+.+++ ...|.|+|+|.||.
T Consensus 149 ~~~~~~~----~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGD----p~~VTl~G~SAGa~ 220 (535)
T PF00135_consen 149 ASLAASK----DVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGD----PDNVTLFGQSAGAA 220 (535)
T ss_dssp HHHHHHH----TSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEE----EEEEEEEEETHHHH
T ss_pred cccccCC----CEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccC----Ccceeeeeeccccc
Confidence 3445555 6889998887 33222211 1 4455555544 466677788744 45799999999999
Q ss_pred HHHHHHHh--CCCcccceeeecCCC
Q 023416 88 LTVRAAKK--NLVKPTAIAAVAPTW 110 (282)
Q Consensus 88 ~a~~~~~~--~~~~v~~lvl~~p~~ 110 (282)
.+..+... ....+.+.|+.++..
T Consensus 221 sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 221 SVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccceeeecccccccccccccccccc
Confidence 98887653 345788999998743
No 238
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=76.74 E-value=14 Score=35.18 Aligned_cols=86 Identities=14% Similarity=0.225 Sum_probs=57.6
Q ss_pred cccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC-CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHH
Q 023416 8 VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 86 (282)
Q Consensus 8 ~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~ 86 (282)
.++-+.+...++.|+.+ ...|.||.-.... ..-+++..++....-++.++. ..+..++|.|+|+
T Consensus 2129 v~pIEG~tt~l~~la~r----------le~PaYglQ~T~~vP~dSies~A~~yirqirkvQP-----~GPYrl~GYSyG~ 2193 (2376)
T KOG1202|consen 2129 VHPIEGFTTALESLASR----------LEIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQP-----EGPYRLAGYSYGA 2193 (2376)
T ss_pred EeccccchHHHHHHHhh----------cCCcchhhhccccCCcchHHHHHHHHHHHHHhcCC-----CCCeeeeccchhH
Confidence 45556666777777776 3456666543221 335777777777777777763 6789999999999
Q ss_pred HHHHHHHHh--CCCcccceeeecC
Q 023416 87 TLTVRAAKK--NLVKPTAIAAVAP 108 (282)
Q Consensus 87 ~~a~~~~~~--~~~~v~~lvl~~p 108 (282)
.++...+.. ...-...+|+++.
T Consensus 2194 ~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2194 CLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred HHHHHHHHHHHhhcCCCcEEEecC
Confidence 999988862 2223445777754
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=75.30 E-value=3 Score=35.44 Aligned_cols=77 Identities=17% Similarity=0.055 Sum_probs=52.0
Q ss_pred CeEEEEecCCCCCCCCC---CCCCC-----------chHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 29 NWRATIVDWPGLGYSDR---PKMDY-----------NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~---~~~~~-----------~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
||.+++=|- ||..+.. ..... ++...+..-++++++.-.+ ....-+..|.|.||.-++..|+
T Consensus 59 G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~---~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 59 GYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGK---APKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred CeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCC---CCCceEEEEeCCCcchHHHHHH
Confidence 799999886 6655532 11111 2233333444555544211 1345678999999999999999
Q ss_pred hCCCcccceeeecCC
Q 023416 95 KNLVKPTAIAAVAPT 109 (282)
Q Consensus 95 ~~~~~v~~lvl~~p~ 109 (282)
++|+..++++.-+|.
T Consensus 135 ryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 135 RYPEDFDGILAGAPA 149 (474)
T ss_pred hChhhcCeEEeCCch
Confidence 999999999999886
No 240
>PLN00021 chlorophyllase
Probab=73.24 E-value=13 Score=29.70 Aligned_cols=45 Identities=13% Similarity=0.103 Sum_probs=29.3
Q ss_pred CccEEEEecCCCC-----C----CCH--HHHHHHHhccCCceEEEeCCc-ccCCCCC
Q 023416 218 KLPLLVVSTEGSP-----R----RSK--AEMEALKGAKGVTKFVEVPGA-LLPQEEY 262 (282)
Q Consensus 218 ~~P~lii~G~~D~-----~----~~~--~~~~~~~~~~~~~~~~~~~~~-H~~~~e~ 262 (282)
.+|++++.+..|. . .|. ...+.+.+..+.....+++++ |+-+.|.
T Consensus 189 ~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~ 245 (313)
T PLN00021 189 DIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDD 245 (313)
T ss_pred CCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecC
Confidence 7999999999763 2 222 223344455556677788888 9866443
No 241
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=72.33 E-value=2.1 Score=34.92 Aligned_cols=80 Identities=9% Similarity=0.115 Sum_probs=42.6
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCC-CC--CCCchHHHHHHHHHHhhCCCCCCcCCCCce
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-PK--MDYNADVMEKFVVDLINAPDSPVSSSESDL 77 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~-~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 77 (282)
|.+|+-+ ++...|...+....+. +.=..+..+|+=.... .. ..+=-...++++.+.+.... ..++
T Consensus 85 lthGi~~-~~~~~~~~~~~~~~kk-----~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~s------i~kI 152 (405)
T KOG4372|consen 85 LTHGLHG-ADMEYWKEKIEQMTKK-----MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYS------IEKI 152 (405)
T ss_pred ecccccc-ccHHHHHHHHHhhhcC-----CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccc------ccee
Confidence 3456655 5677788877777776 3333444444322211 10 11111233444444443333 3567
Q ss_pred EEEcccHHHHHHHHH
Q 023416 78 VIFGGGHAATLTVRA 92 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~ 92 (282)
-.+|||+||.++..+
T Consensus 153 SfvghSLGGLvar~A 167 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYA 167 (405)
T ss_pred eeeeeecCCeeeeEE
Confidence 779999999987743
No 242
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.21 E-value=4.2 Score=28.95 Aligned_cols=36 Identities=11% Similarity=0.026 Sum_probs=31.3
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
..+.++-|.|||+.-|..+--++|+...++|.++..
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 345677899999999999999999999999998763
No 243
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=70.55 E-value=12 Score=31.94 Aligned_cols=63 Identities=14% Similarity=0.120 Sum_probs=45.2
Q ss_pred CccEEEEecCCCCCCCHHHHHHH----HhccC--------CceEEEeCCc-ccCCCC--ChHHHHHHHHHHHHhhcCC
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEAL----KGAKG--------VTKFVEVPGA-LLPQEE--YPAMVAQELYQFLQQTFEP 280 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~----~~~~~--------~~~~~~~~~~-H~~~~e--~p~~~~~~i~~fl~~~~~~ 280 (282)
--.+++.||-.|..+++.....+ .+..+ -.++..+||. |+.--. .+-.....|.+|+++...+
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 57889999999998877544433 22222 3568999999 995433 4557889999999876544
No 244
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=69.37 E-value=9 Score=28.56 Aligned_cols=52 Identities=12% Similarity=-0.019 Sum_probs=30.1
Q ss_pred chHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh--------CCCcccceeeecCC
Q 023416 51 NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--------NLVKPTAIAAVAPT 109 (282)
Q Consensus 51 ~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~--------~~~~v~~lvl~~p~ 109 (282)
.+++..+.+.++++..+ .-.-|+|.|.|+.+|..++.. ....++-+|++++.
T Consensus 85 ~~~~sl~~l~~~i~~~G-------PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~ 144 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENG-------PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGF 144 (212)
T ss_dssp --HHHHHHHHHHHHHH----------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES--
T ss_pred CHHHHHHHHHHHHHhcC-------CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEccc
Confidence 34555666667666643 334579999999999988752 12345677887763
No 245
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=68.49 E-value=16 Score=25.58 Aligned_cols=50 Identities=16% Similarity=0.258 Sum_probs=33.2
Q ss_pred CeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCC-ceEEEcccHHHHHHHHHHH
Q 023416 29 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES-DLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~-~~~l~G~s~G~~~a~~~~~ 94 (282)
|-.|++.|.+|- .++.+.+++.+..+-.. |. =.+++|+|.|-.=++....
T Consensus 67 ~~~vi~Ld~~Gk--------~~sSe~fA~~l~~~~~~--------G~~i~f~IGG~~Gl~~~~~~~a 117 (155)
T COG1576 67 GSYVVLLDIRGK--------ALSSEEFADFLERLRDD--------GRDISFLIGGADGLSEAVKARA 117 (155)
T ss_pred CCeEEEEecCCC--------cCChHHHHHHHHHHHhc--------CCeEEEEEeCcccCCHHHHHHH
Confidence 478999999873 34556666666555432 33 3556899998877776543
No 246
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=67.42 E-value=49 Score=27.64 Aligned_cols=80 Identities=13% Similarity=0.077 Sum_probs=48.0
Q ss_pred hHHHHHHHHHhhcCCCeEEEEecCCCC---CCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcc--------
Q 023416 14 WRLVAQDIVQRVGKVNWRATIVDWPGL---GYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGG-------- 82 (282)
Q Consensus 14 w~~~~~~L~~~~~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~-------- 82 (282)
....+..|.+. |+.|+-|+ +|+ |..... .--+.++++..+...+..-.. .+..+++.|+
T Consensus 135 ~~~Nl~~L~~~----G~~ii~P~-~g~la~~~~g~g-r~~~~~~I~~~~~~~~~~~~l----~gk~vlITgG~T~E~ID~ 204 (399)
T PRK05579 135 TQRNLATLRSR----GVEIIGPA-SGRLACGDVGPG-RMAEPEEIVAAAERALSPKDL----AGKRVLITAGPTREPIDP 204 (399)
T ss_pred HHHHHHHHHHC----CCEEECCC-CccccCCCcCCC-CCCCHHHHHHHHHHHhhhccc----CCCEEEEeCCCccccccc
Confidence 35677788877 89888554 443 333322 234667777777766642111 1778888887
Q ss_pred ----------cHHHHHHHHHHHhCCCcccceeeec
Q 023416 83 ----------GHAATLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 83 ----------s~G~~~a~~~~~~~~~~v~~lvl~~ 107 (282)
-||..+|..++.+. ..+++++
T Consensus 205 VR~isN~SSG~~G~aiA~~l~~~G----a~V~~v~ 235 (399)
T PRK05579 205 VRYITNRSSGKMGYALARAAARRG----ADVTLVS 235 (399)
T ss_pred eeeeccCCcchHHHHHHHHHHHCC----CEEEEeC
Confidence 25667777777652 3455554
No 247
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=66.85 E-value=14 Score=26.05 Aligned_cols=47 Identities=13% Similarity=0.161 Sum_probs=30.1
Q ss_pred eEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHH
Q 023416 30 WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTV 90 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~ 90 (282)
-.+|++|-+|- .++-.++++.+......-. ..-++++|++.|-.-.+
T Consensus 68 ~~~i~LDe~Gk--------~~sS~~fA~~l~~~~~~g~------~~i~F~IGGa~G~~~~v 114 (157)
T PRK00103 68 ARVIALDERGK--------QLSSEEFAQELERWRDDGR------SDVAFVIGGADGLSPAV 114 (157)
T ss_pred CEEEEEcCCCC--------cCCHHHHHHHHHHHHhcCC------ccEEEEEcCccccCHHH
Confidence 45888998763 3555777777776643322 34566788887755444
No 248
>COG0218 Predicted GTPase [General function prediction only]
Probab=65.58 E-value=6.6 Score=28.81 Aligned_cols=31 Identities=29% Similarity=0.608 Sum_probs=20.4
Q ss_pred EEEecCCCCCCCCCCCCCCchHHHHHHHHHHhh
Q 023416 32 ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLIN 64 (282)
Q Consensus 32 vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~ 64 (282)
+..+|+||||....+. ---+.|.+.+.++++
T Consensus 72 ~~lVDlPGYGyAkv~k--~~~e~w~~~i~~YL~ 102 (200)
T COG0218 72 LRLVDLPGYGYAKVPK--EVKEKWKKLIEEYLE 102 (200)
T ss_pred EEEEeCCCcccccCCH--HHHHHHHHHHHHHHh
Confidence 6789999999987654 123455555555554
No 249
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=65.46 E-value=5.3 Score=28.10 Aligned_cols=48 Identities=19% Similarity=0.237 Sum_probs=29.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHH
Q 023416 29 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTV 90 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~ 90 (282)
+-.+|++|-.| ..++-.++++.+......=. ..-++++|++.|-.=.+
T Consensus 67 ~~~~i~Ld~~G--------k~~sS~~fA~~l~~~~~~g~------~~i~F~IGG~~G~~~~~ 114 (155)
T PF02590_consen 67 NDYVILLDERG--------KQLSSEEFAKKLERWMNQGK------SDIVFIIGGADGLSEEV 114 (155)
T ss_dssp TSEEEEE-TTS--------EE--HHHHHHHHHHHHHTTS-------EEEEEE-BTTB--HHH
T ss_pred CCEEEEEcCCC--------ccCChHHHHHHHHHHHhcCC------ceEEEEEecCCCCCHHH
Confidence 37789999987 34666888888888776632 34577899999854443
No 250
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=64.78 E-value=3.1 Score=32.75 Aligned_cols=31 Identities=3% Similarity=0.065 Sum_probs=23.5
Q ss_pred ccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCC
Q 023416 9 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS 43 (282)
Q Consensus 9 ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S 43 (282)
++..-|..+--.|+.+ ||-|-|+..|-+-.+
T Consensus 129 gsRt~YSa~c~~LASh----G~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 129 GSRTLYSAYCTSLASH----GFVVAAVEHRDRSAC 159 (399)
T ss_pred cchhhHHHHhhhHhhC----ceEEEEeecccCcce
Confidence 3445566777788888 999999999877543
No 251
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=63.39 E-value=4.4 Score=29.58 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=37.3
Q ss_pred CccEEEEecCCCCCC-CHHHHHHHHhc-cCCceEEEeCCcccCC-CCChHHHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRR-SKAEMEALKGA-KGVTKFVEVPGALLPQ-EEYPAMVAQELYQF 273 (282)
Q Consensus 218 ~~P~lii~G~~D~~~-~~~~~~~~~~~-~~~~~~~~~~~~H~~~-~e~p~~~~~~i~~f 273 (282)
.+|+.++.|++|... +......+.+. ....++..+++.|+.+ .+++..+.+.|..|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 153 AAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVPGDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEccCchHHHHHHhHHHHHHHHHhh
Confidence 789999999998654 22222334332 3456788888888765 55677777777665
No 252
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=61.88 E-value=8.9 Score=32.33 Aligned_cols=60 Identities=18% Similarity=0.153 Sum_probs=45.4
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhc-------------------------cCCceEEEeCCc-ccCCCCChHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGA-------------------------KGVTKFVEVPGA-LLPQEEYPAMVAQELY 271 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~-H~~~~e~p~~~~~~i~ 271 (282)
..+++|..|+.|.++|.-..+.+.+. ..+..+..+.|+ |++..++|+.....+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 47999999999988876555443111 012334778898 9999999999999999
Q ss_pred HHHHhh
Q 023416 272 QFLQQT 277 (282)
Q Consensus 272 ~fl~~~ 277 (282)
.|+...
T Consensus 443 ~fl~g~ 448 (454)
T KOG1282|consen 443 RFLNGQ 448 (454)
T ss_pred HHHcCC
Confidence 999764
No 253
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=61.73 E-value=75 Score=26.49 Aligned_cols=80 Identities=11% Similarity=0.055 Sum_probs=50.0
Q ss_pred chHHHHHHHHHhhcCCCeEEEEecCCCC--CCCCCCCCCCchHHHHHHHHHHhhC---CCCCCcCCCCceEEEcc-----
Q 023416 13 EWRLVAQDIVQRVGKVNWRATIVDWPGL--GYSDRPKMDYNADVMEKFVVDLINA---PDSPVSSSESDLVIFGG----- 82 (282)
Q Consensus 13 ~w~~~~~~L~~~~~~~g~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~l~~~i~~---l~~~~~~~~~~~~l~G~----- 82 (282)
.....+..|.+. |+.|+-+..--+ |..... .--+.+++++.+...+.. +. +..+++.|+
T Consensus 130 ~~~~Nl~~L~~~----G~~vv~P~~g~~ac~~~g~g-~~~~~~~i~~~v~~~~~~~~~~~------~~~vlit~g~t~E~ 198 (390)
T TIGR00521 130 AVQENIKRLKDD----GYIFIEPDSGLLACGDEGKG-RLAEPETIVKAAEREFSPKEDLE------GKRVLITAGPTREP 198 (390)
T ss_pred HHHHHHHHHHHC----CcEEECCCCcccccccccCC-CCCCHHHHHHHHHHHHhhccccC------CceEEEecCCccCC
Confidence 336677788876 788766653222 443322 234667777777776643 33 777888777
Q ss_pred -------------cHHHHHHHHHHHhCCCcccceeeec
Q 023416 83 -------------GHAATLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 83 -------------s~G~~~a~~~~~~~~~~v~~lvl~~ 107 (282)
.||..+|..+..+ =..++++.
T Consensus 199 iD~VR~itN~SSG~~g~~~a~~~~~~----Ga~V~~~~ 232 (390)
T TIGR00521 199 IDPVRFISNLSSGKMGLALAEAAYKR----GADVTLIT 232 (390)
T ss_pred CCceeeecCCCcchHHHHHHHHHHHC----CCEEEEeC
Confidence 4778888888776 23455554
No 254
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=60.10 E-value=9.5 Score=27.03 Aligned_cols=50 Identities=6% Similarity=0.046 Sum_probs=27.0
Q ss_pred HHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecC
Q 023416 55 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 55 ~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
..+.+.++++.+... +.+++++|.+..|..-+.+....+..++.++=.+|
T Consensus 53 ~~~~l~~~L~~~~~~----gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 53 SKAELREFLEKLKAE----GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHT----T--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHc----CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 333455555444322 78899999999999999998766666776666655
No 255
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=57.43 E-value=10 Score=20.33 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=21.6
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhh
Q 023416 28 VNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLIN 64 (282)
Q Consensus 28 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~ 64 (282)
.+|.+.+||+||+- + ..-|.++..+.+.+.+.
T Consensus 12 ~~y~~~~pdlpg~~-t----~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 12 GGYVAYFPDLPGCF-T----QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSEEEEETTCCTCE-E----EESSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChh-h----cCCCHHHHHHHHHHHHH
Confidence 47999999999864 1 22356666666665554
No 256
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=55.19 E-value=6.5 Score=31.84 Aligned_cols=55 Identities=15% Similarity=-0.003 Sum_probs=39.0
Q ss_pred HHhhcccCCccEEEEecCCCCCCCHHHH-HHHHhccCCc--eEEEeCCc-ccCCCCChHHH
Q 023416 210 QLFADLEGKLPLLVVSTEGSPRRSKAEM-EALKGAKGVT--KFVEVPGA-LLPQEEYPAMV 266 (282)
Q Consensus 210 ~~l~~i~~~~P~lii~G~~D~~~~~~~~-~~~~~~~~~~--~~~~~~~~-H~~~~e~p~~~ 266 (282)
.-+.++ ++|++++.|..|.+.|.... ......+++. -+.+++++ |+-..|-.+++
T Consensus 245 tgl~~v--~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKV--TDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceee--ecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 445566 99999999999987765433 2333455555 47789999 99887766553
No 257
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=53.60 E-value=36 Score=20.64 Aligned_cols=22 Identities=18% Similarity=0.324 Sum_probs=17.0
Q ss_pred CCceEEEcccHHHHHHHHHHHh
Q 023416 74 ESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
...+.++|.|.|-.+|.+.+..
T Consensus 39 pK~VLViGaStGyGLAsRIa~a 60 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAA 60 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHH
T ss_pred CceEEEEecCCcccHHHHHHHH
Confidence 3578889999999999887764
No 258
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=53.54 E-value=18 Score=30.49 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=22.6
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc-cc
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LL 257 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~ 257 (282)
..-+++..|+.|++........ .......++++|| |+
T Consensus 376 ~tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc 413 (434)
T PF05577_consen 376 ATNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHC 413 (434)
T ss_dssp --SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TT
T ss_pred CCeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeee
Confidence 3578999999999877653222 2334456789999 98
No 259
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=52.08 E-value=24 Score=30.06 Aligned_cols=31 Identities=6% Similarity=0.039 Sum_probs=26.2
Q ss_pred CceEEEeCCcccCCCCChHHHHHHHHHHHHh
Q 023416 246 VTKFVEVPGALLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 246 ~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~~ 276 (282)
...+.++++||++..++|+...+.+..|+.-
T Consensus 460 ~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 460 LTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred ceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 3446678888999999999999999998865
No 260
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=50.79 E-value=24 Score=30.85 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=25.5
Q ss_pred eEEEcccHHHHHHHHHHHh-CCCcccceeeecCCC
Q 023416 77 LVIFGGGHAATLTVRAAKK-NLVKPTAIAAVAPTW 110 (282)
Q Consensus 77 ~~l~G~s~G~~~a~~~~~~-~~~~v~~lvl~~p~~ 110 (282)
||--+-|-||.-++..++. ....|++++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 4446788999999999884 345688888877753
No 261
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=50.46 E-value=7.9 Score=27.33 Aligned_cols=52 Identities=15% Similarity=0.227 Sum_probs=27.0
Q ss_pred cCCCCCCCCC--CC-CCCchHHHHHHHHHHhhCCCCCCc--CCCCceEEEcccHHHH
Q 023416 36 DWPGLGYSDR--PK-MDYNADVMEKFVVDLINAPDSPVS--SSESDLVIFGGGHAAT 87 (282)
Q Consensus 36 D~~G~G~S~~--~~-~~~~~~~~~~~l~~~i~~l~~~~~--~~~~~~~l~G~s~G~~ 87 (282)
-+-|||.... +. ..++.+.++.-+..|-+.+..... ....++.|+|.+++..
T Consensus 60 ~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 60 QLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3568997722 11 567888888888444333321100 0145788888887766
No 262
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=49.62 E-value=98 Score=23.05 Aligned_cols=26 Identities=19% Similarity=0.219 Sum_probs=20.0
Q ss_pred ccccchHHHHHHHHHhhcCCCeEEEEecCC
Q 023416 9 STVEEWRLVAQDIVQRVGKVNWRATIVDWP 38 (282)
Q Consensus 9 ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~ 38 (282)
.++..=+.+...|++. |++|.+.|+.
T Consensus 22 g~sGIGrAia~~la~~----Garv~v~dl~ 47 (256)
T KOG1200|consen 22 GSSGIGRAIAQLLAKK----GARVAVADLD 47 (256)
T ss_pred CCchHHHHHHHHHHhc----CcEEEEeecc
Confidence 3445557788889988 9999999864
No 263
>PLN02661 Putative thiazole synthesis
Probab=49.35 E-value=35 Score=27.88 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=23.0
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeec
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~ 107 (282)
..+++++|...+|..+...+.+.+.. +++++.
T Consensus 92 ~~DVlIVGaG~AGl~AA~~La~~~g~--kV~viE 123 (357)
T PLN02661 92 DTDVVIVGAGSAGLSCAYELSKNPNV--KVAIIE 123 (357)
T ss_pred cCCEEEECCHHHHHHHHHHHHHcCCC--eEEEEe
Confidence 46799999988888888887764432 555554
No 264
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=49.31 E-value=67 Score=25.14 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=35.8
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc--cc-CCCCChHHHHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA--LL-PQEEYPAMVAQELYQFL 274 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--H~-~~~e~p~~~~~~i~~fl 274 (282)
.+|+.++.|++ ...++.++..|+.+.+.++.+ ++ ...-.|++..+.|.+=.
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa 200 (270)
T cd08769 147 GVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAV 200 (270)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHH
Confidence 89999999976 445566666799999999886 33 33445666666665544
No 265
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=48.69 E-value=40 Score=23.72 Aligned_cols=46 Identities=13% Similarity=0.219 Sum_probs=25.3
Q ss_pred eEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHH
Q 023416 30 WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTV 90 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~ 90 (282)
-.||++|-+|- .++..++++.+.+.... + ..-++++|++.|-.-.+
T Consensus 66 ~~~i~LDe~Gk--------~~sS~~fA~~l~~~~~~-g------~~i~FvIGGa~G~~~~v 111 (153)
T TIGR00246 66 AHVVTLDIPGK--------PWTTPQLADTLEKWKTD-G------RDVTLLIGGPEGLSPTC 111 (153)
T ss_pred CeEEEEcCCCC--------cCCHHHHHHHHHHHhcc-C------CeEEEEEcCCCcCCHHH
Confidence 35777777652 34555666666655322 1 22355677776654444
No 266
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=48.03 E-value=26 Score=27.70 Aligned_cols=30 Identities=10% Similarity=-0.133 Sum_probs=21.9
Q ss_pred HHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 59 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 59 l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
+.++++..+ ..+..++|||+|-..|+..+.
T Consensus 66 l~~~l~~~g------~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALL------PRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcC------CCCcEEeecCHHHHHHHHHhC
Confidence 344455665 567889999999988887654
No 267
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=48.02 E-value=82 Score=26.29 Aligned_cols=89 Identities=13% Similarity=0.149 Sum_probs=55.7
Q ss_pred cchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCC-C---------CC-------------CchHHHHHHHHHHhhCCCC
Q 023416 12 EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-K---------MD-------------YNADVMEKFVVDLINAPDS 68 (282)
Q Consensus 12 ~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~-~---------~~-------------~~~~~~~~~l~~~i~~l~~ 68 (282)
..+..+.+.+.+. |..|+.+|.-=.|.+..+ + .. ..++.+++-+..++..+..
T Consensus 15 ~E~~yl~~~i~~~----G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~ 90 (403)
T PF06792_consen 15 EELLYLRDQIEAQ----GVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYD 90 (403)
T ss_pred HHHHHHHHHHHHC----CCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3455566667776 899999998666554332 1 01 1223334444555554432
Q ss_pred CCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeee
Q 023416 69 PVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAV 106 (282)
Q Consensus 69 ~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~ 106 (282)
+.. .+-++-+|+|.|..++......-|.-+-+++..
T Consensus 91 ~g~--i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 91 EGK--IDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred cCC--ccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 111 345777999999999999988888777777654
No 268
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=46.25 E-value=21 Score=26.92 Aligned_cols=25 Identities=12% Similarity=0.185 Sum_probs=19.8
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKG 242 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~ 242 (282)
..|++++||+.|..+.+...+++.+
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~ 193 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVA 193 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHH
Confidence 4699999999999887776665543
No 269
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=43.10 E-value=81 Score=25.36 Aligned_cols=63 Identities=10% Similarity=0.213 Sum_probs=42.2
Q ss_pred HHHhhcccCCccEEEEecCCCCCCCHHHHHHHHh---ccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHH
Q 023416 209 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKG---AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 209 ~~~l~~i~~~~P~lii~G~~D~~~~~~~~~~~~~---~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~ 275 (282)
...+.+. +.|+++|.-++ +-..+....+++ ...+..+.++.|+ |..+-|-|=.+-+.|..++.
T Consensus 280 ~~~~~~a--rqP~~finv~~--fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~ 346 (399)
T KOG3847|consen 280 QLQYSQA--RQPTLFINVED--FQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFK 346 (399)
T ss_pred hhhhhhc--cCCeEEEEccc--ccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhc
Confidence 3455666 89999999443 333345555544 3345578999999 99888877766666666654
No 270
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=42.59 E-value=32 Score=27.16 Aligned_cols=29 Identities=10% Similarity=-0.024 Sum_probs=21.0
Q ss_pred HHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 60 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 60 ~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
.++++.++ ..+-.++|||+|-..|+..+.
T Consensus 73 ~~~l~~~G------i~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWG------VRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcC------CcccEEEecCHHHHHHHHHhC
Confidence 34455665 457788999999988876654
No 271
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=41.98 E-value=1e+02 Score=24.06 Aligned_cols=52 Identities=15% Similarity=0.127 Sum_probs=36.7
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc--ccCCCCChHHHHHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA--LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--H~~~~e~p~~~~~~i~~fl~ 275 (282)
.+|++++.|++ ...++.++..|+.+.+.++.+ .....-.|++..+.|.+=..
T Consensus 147 gVPV~lvsGD~------~~~~ea~~~~P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~~~~ 200 (263)
T cd08770 147 GVPVVFVSGDA------GLCAEAKELNPNIVTVPVKEGFGGATISIHPGLACKEIRKGVK 200 (263)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEeeeeeccccccCCHHHHHHHHHHHHH
Confidence 89999999965 334445666799999998887 33333467877777776553
No 272
>PRK02399 hypothetical protein; Provisional
Probab=41.97 E-value=1.5e+02 Score=24.91 Aligned_cols=89 Identities=17% Similarity=0.163 Sum_probs=52.4
Q ss_pred cchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCC-CC----------------------CCCchHHHHHHHHHHhhCCCC
Q 023416 12 EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-PK----------------------MDYNADVMEKFVVDLINAPDS 68 (282)
Q Consensus 12 ~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~-~~----------------------~~~~~~~~~~~l~~~i~~l~~ 68 (282)
.....+.+.+.+. |..|+.+|.-..|.... ++ ...-++.+.+-+..+++.+-.
T Consensus 17 ~E~~yl~~~i~~~----g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~L~~ 92 (406)
T PRK02399 17 EELAYVKDLIEAA----GLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAAFVRELYE 92 (406)
T ss_pred HHHHHHHHHHHHC----CCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455666665 89999999954442211 10 011123334444445543321
Q ss_pred CCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeee
Q 023416 69 PVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAV 106 (282)
Q Consensus 69 ~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~ 106 (282)
+.. .+-++-+|+|.|..++......-|.-+-+++..
T Consensus 93 ~g~--i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 93 RGD--VAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred cCC--ccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 111 345777999999999999888878777776654
No 273
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=40.64 E-value=30 Score=28.60 Aligned_cols=31 Identities=0% Similarity=0.209 Sum_probs=19.8
Q ss_pred CcccCcccccchHHHHHHHHHhhcCCCeEEEEecCCC
Q 023416 3 PTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPG 39 (282)
Q Consensus 3 p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G 39 (282)
||+. ++...|..+...|+.+ ||-|+++|.|.
T Consensus 107 HGlg--g~R~~yS~~~~eLAS~----GyVV~aieHrD 137 (379)
T PF03403_consen 107 HGLG--GSRTSYSAICGELASH----GYVVAAIEHRD 137 (379)
T ss_dssp --TT----TTTTHHHHHHHHHT----T-EEEEE---S
T ss_pred CCCC--cchhhHHHHHHHHHhC----CeEEEEeccCC
Confidence 5565 4566788999999999 99999999994
No 274
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=40.53 E-value=1.1e+02 Score=23.85 Aligned_cols=52 Identities=15% Similarity=0.126 Sum_probs=36.7
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc---ccCCCCChHHHHHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA---LLPQEEYPAMVAQELYQFLQ 275 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~---H~~~~e~p~~~~~~i~~fl~ 275 (282)
.+|+.++.|++ ...++.++..|+.+.+.++.+ +..-.-.|++..+.|.+=..
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~ 201 (266)
T cd08663 147 GVPVVLVTGDD------AACAEARELGPGVETVAVKEAIGRFAARCLPPAEARALIREAAA 201 (266)
T ss_pred CCCEEEEecCH------HHHHHHHhhCCCcEEEEEecccCCCccccCCHHHHHHHHHHHHH
Confidence 89999999965 344445667899998888886 33444467777777766553
No 275
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=40.52 E-value=78 Score=18.89 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=19.1
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHh
Q 023416 28 VNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLI 63 (282)
Q Consensus 28 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i 63 (282)
.+|.+..+|+||+=.- .-|.++..+.+++.+
T Consensus 14 g~y~~~~Pdlpgc~s~-----G~T~eea~~n~~eai 44 (73)
T COG1598 14 GGYVASVPDLPGCHSQ-----GETLEEALQNAKEAI 44 (73)
T ss_pred CCEEEEeCCCCCcccc-----CCCHHHHHHHHHHHH
Confidence 3799999999997531 224444444444443
No 276
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=40.35 E-value=18 Score=28.91 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=21.3
Q ss_pred HHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHH
Q 023416 59 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAA 93 (282)
Q Consensus 59 l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~ 93 (282)
+.++++..+ ..+-.++|||+|=..|+..+
T Consensus 74 l~~~l~~~G------i~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWG------IKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTT------HCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccc------cccceeeccchhhHHHHHHC
Confidence 345556666 57788899999988877554
No 277
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=39.27 E-value=25 Score=18.33 Aligned_cols=14 Identities=36% Similarity=0.714 Sum_probs=10.8
Q ss_pred eEEEEecCCCCCCC
Q 023416 30 WRATIVDWPGLGYS 43 (282)
Q Consensus 30 ~~vi~~D~~G~G~S 43 (282)
-.+-+-|+||||+-
T Consensus 35 gairardwpg~gq~ 48 (49)
T PF08197_consen 35 GAIRARDWPGYGQG 48 (49)
T ss_pred cceEeccCCCcCCC
Confidence 35678899999973
No 278
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.73 E-value=62 Score=27.86 Aligned_cols=36 Identities=8% Similarity=0.056 Sum_probs=27.1
Q ss_pred CCceEEEcccHHHHHHHHHHH-----hCCCcccceeeecCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAK-----KNLVKPTAIAAVAPT 109 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~-----~~~~~v~~lvl~~p~ 109 (282)
.+|+.|+|.|+|+.+...... +....|..++|++.+
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaP 486 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAP 486 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCC
Confidence 689999999999998875433 234557788888653
No 279
>cd01852 AIG1 AIG1 (avrRpt2-induced gene 1). This represents Arabidoposis protein AIG1 that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).
Probab=38.43 E-value=1.1e+02 Score=22.26 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=14.6
Q ss_pred CeEEEEecCCCCCCCCC
Q 023416 29 NWRATIVDWPGLGYSDR 45 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~ 45 (282)
|.++..+|-||++.+..
T Consensus 48 ~~~i~viDTPG~~d~~~ 64 (196)
T cd01852 48 GRRVNVIDTPGLFDTSV 64 (196)
T ss_pred CeEEEEEECcCCCCccC
Confidence 58899999999998753
No 280
>PF01715 IPPT: IPP transferase; InterPro: IPR002627 tRNA isopentenyltransferases 2.5.1.8 from EC also known as tRNA delta(2)-isopentenylpyrophosphate transferases or IPP transferases. These enzymes modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37) [].; GO: 0005524 ATP binding, 0008033 tRNA processing; PDB: 2ZXU_A 3FOZ_A 2ZM5_B 3D3Q_A 3EXA_B 2QGN_A 3A8T_A 3EPK_B 3EPH_A 3EPJ_A ....
Probab=38.38 E-value=17 Score=28.08 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=22.4
Q ss_pred CCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEccc
Q 023416 46 PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGG 83 (282)
Q Consensus 46 ~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s 83 (282)
|...||..++.++....++.+... +.-.+|+|++
T Consensus 32 p~e~ysv~~f~~~a~~~i~~i~~r----gk~PIlvGGT 65 (253)
T PF01715_consen 32 PDEEYSVGDFQRDAREAIEDILAR----GKIPILVGGT 65 (253)
T ss_dssp TTS---HHHHHHHHHHHHHHHHHT----T-EEEEEES-
T ss_pred ccCCCCHHHHHHHHHHHHHHHHhc----CCeEEEECCh
Confidence 447899999999999888766432 6667888886
No 281
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=38.05 E-value=32 Score=26.07 Aligned_cols=57 Identities=11% Similarity=0.197 Sum_probs=35.5
Q ss_pred EEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceE--EEcccHHHHHHHHH
Q 023416 31 RATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLV--IFGGGHAATLTVRA 92 (282)
Q Consensus 31 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~--l~G~s~G~~~a~~~ 92 (282)
=|..+|-+|...|.+. +-+.+......+.+-+...... ||+++ ++|++|+|.+...-
T Consensus 67 Iv~lVD~~sQa~grre-EllGi~~alAhla~a~a~AR~~----GHpvI~Lv~G~A~SGaFLA~G 125 (234)
T PF06833_consen 67 IVALVDVPSQAYGRRE-ELLGINQALAHLAKAYALARLA----GHPVIGLVYGKAMSGAFLAHG 125 (234)
T ss_pred EEEEEeCCccccchHH-HHhhHHHHHHHHHHHHHHHHHc----CCCeEEEEecccccHHHHHHH
Confidence 3667799988776543 3455666555555544433222 88876 58998877665543
No 282
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=37.82 E-value=67 Score=18.45 Aligned_cols=35 Identities=9% Similarity=0.112 Sum_probs=27.6
Q ss_pred hccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 242 GAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 242 ~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
+..|+. ++.+-+| +++-.|.++++.+.|.+|-.+.
T Consensus 23 e~~PDT-vItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 23 EETPDT-VITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred EEcCCe-EEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 345764 5666667 9999999999999999997764
No 283
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=37.56 E-value=47 Score=28.99 Aligned_cols=58 Identities=10% Similarity=-0.023 Sum_probs=37.5
Q ss_pred CCCchHHHHH---HHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh--CCCcccceeeecCC
Q 023416 48 MDYNADVMEK---FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPT 109 (282)
Q Consensus 48 ~~~~~~~~~~---~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~--~~~~v~~lvl~~p~ 109 (282)
.++.+.|+.. .+.+-|...++. ..+|.++|||.||..+..+... ......+.|.++..
T Consensus 169 gN~gl~Dq~~AL~wv~~~I~~FGGd----p~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 169 GNLGLFDQLLALRWVKDNIPSFGGD----PKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCC----CCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 4555555544 455666777754 5689999999999998776541 11345566666654
No 284
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=37.33 E-value=1.3e+02 Score=23.48 Aligned_cols=51 Identities=12% Similarity=0.137 Sum_probs=35.3
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc--cc-CCCCChHHHHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA--LL-PQEEYPAMVAQELYQFL 274 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--H~-~~~e~p~~~~~~i~~fl 274 (282)
.+|+.++.|++ ...++.++..|+.+.+.++.+ ++ .-.-.|++..+.|.+=.
T Consensus 146 gVPV~lvsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a 199 (265)
T cd00281 146 GVPVVMVAGDA------EVCKEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIREGT 199 (265)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHHHH
Confidence 89999999965 334445566799999998886 33 33345777766666554
No 285
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=36.26 E-value=1.1e+02 Score=20.77 Aligned_cols=60 Identities=12% Similarity=0.083 Sum_probs=36.1
Q ss_pred Ccc-EEEEecCCC---CCCCHHHHHHHHhccCCce-EEEeCCc-ccCCCCChHHHHHHHHHHHHhh
Q 023416 218 KLP-LLVVSTEGS---PRRSKAEMEALKGAKGVTK-FVEVPGA-LLPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 218 ~~P-~lii~G~~D---~~~~~~~~~~~~~~~~~~~-~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~ 277 (282)
+.| +|-++|--- ..+..-.++.+.+..-+++ +..+-.. |+++.++-++..+.|.+|+.+.
T Consensus 51 ~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP~~~~v~~Yk~~L~~~I~~~ 116 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFPHNSNVDEYKEQLKSWIRGN 116 (127)
T ss_pred CCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCCCchHHHHHHHHHHHHHHHH
Confidence 344 455676543 2333334444333333344 4445556 9999998888888999888764
No 286
>PF03283 PAE: Pectinacetylesterase
Probab=36.17 E-value=1.1e+02 Score=25.19 Aligned_cols=21 Identities=10% Similarity=0.134 Sum_probs=18.0
Q ss_pred CCceEEEcccHHHHHHHHHHH
Q 023416 74 ESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~ 94 (282)
...++|.|.|.||.-++.++.
T Consensus 155 a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred cceEEEeccChHHHHHHHHHH
Confidence 467999999999999988766
No 287
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=35.47 E-value=2.2e+02 Score=22.39 Aligned_cols=76 Identities=5% Similarity=0.050 Sum_probs=44.4
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHH
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
...++.+.+. .++.++.+|-+|....+ ....+.+.++++.... ...+.++..++++.-+...+.
T Consensus 143 ~~~l~~l~~~---~~~D~ViIDt~Gr~~~~--------~~~l~el~~~~~~~~~-----~~~~LVl~a~~~~~d~~~~~~ 206 (270)
T PRK06731 143 TRALTYFKEE---ARVDYILIDTAGKNYRA--------SETVEEMIETMGQVEP-----DYICLTLSASMKSKDMIEIIT 206 (270)
T ss_pred HHHHHHHHhc---CCCCEEEEECCCCCcCC--------HHHHHHHHHHHhhhCC-----CeEEEEEcCccCHHHHHHHHH
Confidence 3444445442 25999999999875422 3344555566654431 233445667777766666665
Q ss_pred h-CCCcccceeee
Q 023416 95 K-NLVKPTAIAAV 106 (282)
Q Consensus 95 ~-~~~~v~~lvl~ 106 (282)
+ ....++++|+-
T Consensus 207 ~f~~~~~~~~I~T 219 (270)
T PRK06731 207 NFKDIHIDGIVFT 219 (270)
T ss_pred HhCCCCCCEEEEE
Confidence 4 34556777764
No 288
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=34.43 E-value=3.1e+02 Score=23.77 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=47.6
Q ss_pred HHHHHHHHHhhcCCCeEEEEecCCC----CCCCCCCCCCCchHHHHHHHHHHhhC-----CCCCCcCCCCceEEEc----
Q 023416 15 RLVAQDIVQRVGKVNWRATIVDWPG----LGYSDRPKMDYNADVMEKFVVDLINA-----PDSPVSSSESDLVIFG---- 81 (282)
Q Consensus 15 ~~~~~~L~~~~~~~g~~vi~~D~~G----~G~S~~~~~~~~~~~~~~~l~~~i~~-----l~~~~~~~~~~~~l~G---- 81 (282)
+..+..|.+. |+.|+-|+. | +|..... .--..++++..+..++.. +. |.++++.+
T Consensus 200 ~~Nl~~L~~~----G~~vi~P~~-g~lA~~g~~G~G-rm~e~~~I~~~v~~~~~~~~~~~l~------gkkvLITaGpT~ 267 (475)
T PRK13982 200 RRNVAQLKRD----GVHMIGPNA-GEMAERGEAGVG-RMAEPLEIAAAAEALLRPPQPKPLA------GRRVLITAGPTH 267 (475)
T ss_pred HHHHHHHHHC----CCEEECCCC-CccccCCCcCCC-CCCCHHHHHHHHHHHHhhccccccC------CCEEEEecCCcc
Confidence 4677888887 899987754 3 4544332 233556777777766632 33 44544433
Q ss_pred --------------ccHHHHHHHHHHHhCCCcccceeeecC
Q 023416 82 --------------GGHAATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 82 --------------~s~G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
+-||-.+|..+..+. ..+++++.
T Consensus 268 E~IDpVR~ItN~SSGkmG~alA~aa~~~G----A~VtlI~G 304 (475)
T PRK13982 268 EPIDPVRYIANRSSGKQGFAIAAAAAAAG----AEVTLISG 304 (475)
T ss_pred ccCCcceeeCCCCchHHHHHHHHHHHHCC----CcEEEEeC
Confidence 457778888777663 45666653
No 289
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=34.06 E-value=45 Score=27.70 Aligned_cols=38 Identities=11% Similarity=0.233 Sum_probs=29.5
Q ss_pred CCCcccCcccccchHHHHHHHHHhhcCCCeEEE--EecCCCCCCC
Q 023416 1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRAT--IVDWPGLGYS 43 (282)
Q Consensus 1 ~~p~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi--~~D~~G~G~S 43 (282)
++||+++-+++...+.+.+.+++. |.|+ .+++=|+|.-
T Consensus 40 iI~GfG~dan~~~~d~~r~~iA~~-----fnvv~I~V~YHCf~~R 79 (403)
T PF11144_consen 40 IIPGFGADANSNYLDFMREYIAKK-----FNVVVISVNYHCFCNR 79 (403)
T ss_pred EeCCcCCCcchHHHHHHHHHHHHh-----CCEEEEEeeeeheeec
Confidence 589999888888889999999998 6555 4566665543
No 290
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=32.92 E-value=36 Score=27.08 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=25.3
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEccc
Q 023416 48 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGG 83 (282)
Q Consensus 48 ~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s 83 (282)
..||..+|.++..+.|+.+... +...+|+|++
T Consensus 70 e~~sv~~f~~~a~~~i~~i~~~----gk~PilvGGT 101 (300)
T PRK14729 70 KEYNLGIFYKEALKIIKELRQQ----KKIPIFVGGS 101 (300)
T ss_pred CceeHHHHHHHHHHHHHHHHHC----CCCEEEEeCc
Confidence 6799999999999999876432 5667888886
No 291
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=32.13 E-value=39 Score=26.96 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=26.4
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccH
Q 023416 48 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGH 84 (282)
Q Consensus 48 ~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~ 84 (282)
..||..++..++.+.++.+... |.-.+++|+++
T Consensus 70 e~ysa~~f~~~a~~~i~~i~~r----gk~pIlVGGTg 102 (308)
T COG0324 70 ESYSAAEFQRDALAAIDDILAR----GKLPILVGGTG 102 (308)
T ss_pred ccccHHHHHHHHHHHHHHHHhC----CCCcEEEccHH
Confidence 5789999999999988877543 66788899874
No 292
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=31.68 E-value=1.1e+02 Score=17.74 Aligned_cols=46 Identities=13% Similarity=0.093 Sum_probs=32.7
Q ss_pred CCHHHHHHHHhccCCceEEEeCCcccCCCCChHHHHHHHHHHHHhhc
Q 023416 232 RSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
..+...+.+ +..|+..+..+.|--++-.|.-++|.+.|.+|-.+..
T Consensus 14 lN~~~IE~i-e~~PDttItLinGkkyvVkEsveEVi~kI~~y~rkI~ 59 (67)
T COG1582 14 LNAHHIETI-EAFPDTTITLINGKKYVVKESVEEVINKIIEYRRKIG 59 (67)
T ss_pred eCHHHhhhh-hccCCcEEEEEcCcEEEEcccHHHHHHHHHHHHHHhh
Confidence 444444443 4468887666655588888999999999999977653
No 293
>PHA02114 hypothetical protein
Probab=31.57 E-value=56 Score=20.78 Aligned_cols=22 Identities=9% Similarity=0.256 Sum_probs=19.0
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEe
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIV 35 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~ 35 (282)
|..-|-.+...|... ||.|++-
T Consensus 94 sr~pwi~v~s~le~~----g~~vvat 115 (127)
T PHA02114 94 SRAPWIKVISRLEEA----GFNVVAT 115 (127)
T ss_pred ccCcHHHHHHHHHhc----Cceeeeh
Confidence 566799999999998 9999985
No 294
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=31.52 E-value=1.9e+02 Score=21.67 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=29.0
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCcc
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGAL 256 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H 256 (282)
..|.+.+.|..+...+.+..+.+++...+-=+..++.++
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~~ 91 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDRD 91 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECCC
Confidence 469999999998877778888887765555566666653
No 295
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=31.07 E-value=2.3e+02 Score=23.95 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=36.1
Q ss_pred CCCCCCCCCchHHHHHHHHHHh-hCCCCCCcCCCCceEEEccc-HHHHHHHHHHHhCCCcccceeeec
Q 023416 42 YSDRPKMDYNADVMEKFVVDLI-NAPDSPVSSSESDLVIFGGG-HAATLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 42 ~S~~~~~~~~~~~~~~~l~~~i-~~l~~~~~~~~~~~~l~G~s-~G~~~a~~~~~~~~~~v~~lvl~~ 107 (282)
.|.-+....|+...+-++..-+ ..+. +.++.++|.+ ||..++.++.... +..++.++
T Consensus 151 eT~I~~~~VSi~saAv~lA~~~~~~L~------~~~vlvIGAGem~~lva~~L~~~g---~~~i~IaN 209 (414)
T COG0373 151 ETGIGKGAVSISSAAVELAKRIFGSLK------DKKVLVIGAGEMGELVAKHLAEKG---VKKITIAN 209 (414)
T ss_pred ccCCCCCccchHHHHHHHHHHHhcccc------cCeEEEEcccHHHHHHHHHHHhCC---CCEEEEEc
Confidence 3333445567776666655444 3355 7889999988 8888888777652 34455443
No 296
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=30.52 E-value=69 Score=25.09 Aligned_cols=20 Identities=15% Similarity=-0.052 Sum_probs=16.3
Q ss_pred CceEEEcccHHHHHHHHHHH
Q 023416 75 SDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~ 94 (282)
.+-.++|||+|-+.|+..+.
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCEEeecCHHHHHHHHHhC
Confidence 46788999999988887664
No 297
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=30.27 E-value=42 Score=26.02 Aligned_cols=14 Identities=14% Similarity=0.470 Sum_probs=11.5
Q ss_pred CCceEEEcccHHHH
Q 023416 74 ESDLVIFGGGHAAT 87 (282)
Q Consensus 74 ~~~~~l~G~s~G~~ 87 (282)
...++++|||+|..
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 46799999999864
No 298
>PRK10279 hypothetical protein; Provisional
Probab=29.93 E-value=72 Score=25.47 Aligned_cols=22 Identities=9% Similarity=-0.031 Sum_probs=18.2
Q ss_pred CceEEEcccHHHHHHHHHHHhC
Q 023416 75 SDLVIFGGGHAATLTVRAAKKN 96 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~~~ 96 (282)
..-.+.|-|+|+.++..|+...
T Consensus 33 ~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 33 EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred CcCEEEEEcHHHHHHHHHHcCC
Confidence 4566799999999999998753
No 299
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=29.89 E-value=75 Score=25.95 Aligned_cols=34 Identities=26% Similarity=0.532 Sum_probs=23.4
Q ss_pred ceEEEcccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 76 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 76 ~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
+++++|+++||..++....+....-..++++++.
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~ 34 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPS 34 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCC
Confidence 3789999999988877664332222478888764
No 300
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=29.32 E-value=1.2e+02 Score=25.50 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=32.3
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhcc--CCce--EEEeCCc-c---cCCCCChHHHHHHHHHHHHhh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAK--GVTK--FVEVPGA-L---LPQEEYPAMVAQELYQFLQQT 277 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~--~~~~~~~-H---~~~~e~p~~~~~~i~~fl~~~ 277 (282)
..|++|+.|.-|..-. +....+.+.. .+.- .+.+||. + +...+..+...+.|.+||.+.
T Consensus 189 p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp -EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcC
Confidence 6899999999997665 3333333321 2222 3456664 4 455566778999999999874
No 301
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=29.28 E-value=2.8e+02 Score=23.65 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=35.5
Q ss_pred CeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhC--CCcccceeee
Q 023416 29 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN--LVKPTAIAAV 106 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~--~~~v~~lvl~ 106 (282)
+|.++.+|-+|.-.. -+.+.+.+..+.+... ...++++--++-|.-+...+..+ ...+.++|+-
T Consensus 182 ~~DvViIDTaGr~~~--------d~~lm~El~~i~~~~~------p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 182 NFDIIIVDTSGRHKQ--------EDSLFEEMLQVAEAIQ------PDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCEEEEECCCCCcc--------hHHHHHHHHHHhhhcC------CcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 699999999984321 1345566666665554 34445544444444444444332 2345666665
No 302
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=28.74 E-value=1.2e+02 Score=23.94 Aligned_cols=50 Identities=12% Similarity=0.163 Sum_probs=33.4
Q ss_pred CchHHHHHHHHHHh-hCCCCCCcCCCCceEEEcccHHHHHHHHHHHhCCCcccceeeecC
Q 023416 50 YNADVMEKFVVDLI-NAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 50 ~~~~~~~~~l~~~i-~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
..++.-+.....++ +.... +..+.++|.|-|+..|..++.. |..+-++.+
T Consensus 71 ~g~~~~I~~ay~~l~~~~~~-----gd~I~lfGFSRGA~~AR~~a~~----i~~~Gll~~ 121 (277)
T PF09994_consen 71 WGIEARIRDAYRFLSKNYEP-----GDRIYLFGFSRGAYTARAFANM----IDKIGLLKP 121 (277)
T ss_pred cchHHHHHHHHHHHHhccCC-----cceEEEEecCccHHHHHHHHHH----HhhcCCcCc
Confidence 34555555444443 55532 7789999999999999999976 555545443
No 303
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=28.19 E-value=1.3e+02 Score=26.56 Aligned_cols=50 Identities=20% Similarity=0.323 Sum_probs=33.4
Q ss_pred chHHHHHHHHHHhhCCCCCCcCCCCceEEEcc------cHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 51 NADVMEKFVVDLINAPDSPVSSSESDLVIFGG------GHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 51 ~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~------s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
....+...+.+++.. ...|++||| ++|+.+++..-+..-.+ ++.+.+.|.
T Consensus 322 RaRvis~al~d~i~e--------~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 322 RARVISTALSDIIKE--------SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHHhh--------cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 445556666666655 568999998 78999988765433333 567777763
No 304
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=28.11 E-value=79 Score=25.32 Aligned_cols=21 Identities=14% Similarity=-0.004 Sum_probs=17.3
Q ss_pred CceEEEcccHHHHHHHHHHHh
Q 023416 75 SDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~~ 95 (282)
..-.+.|-|+|+.++..|+..
T Consensus 43 ~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 43 PVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CCCEEEEECHHHHHHHHHHcC
Confidence 345669999999999999874
No 305
>PF04951 Peptidase_M55: D-aminopeptidase; InterPro: IPR007035 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M55 (DppA aminopeptidase family, clan MN). The type example is Bacillus subtilis DppA, which is a binuclear zinc-dependent, D-specific aminopeptidase. The structure reveals that DppA is a new example of a self-compartmentalising protease, a family of proteolytic complexes. Proteasomes are the most extensively studied representatives of this family. The DppA enzyme is composed of identical 30 kDa subunits organised in a decamer with 52 point-group symmetry. A 20 A wide channel runs through the complex, giving access to a central chamber holding the active sites. The structure shows DppA to be a prototype of a new family of metalloaminopeptidases characterised by the SXDXEG key sequence []. The only known substrates are D-ala-D-ala and D-ala-gly-gly.; PDB: 1HI9_A.
Probab=28.08 E-value=70 Score=24.96 Aligned_cols=53 Identities=19% Similarity=0.152 Sum_probs=35.7
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCceEEEeCCc---ccCCCCChHHHHHHHHHHHHh
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA---LLPQEEYPAMVAQELYQFLQQ 276 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~---H~~~~e~p~~~~~~i~~fl~~ 276 (282)
.+|+.++.|++ ...++.++..|+...+.++.+ +....-.|++..+.|.+=..+
T Consensus 147 GVPV~lVsGD~------~l~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~i~~~a~~ 202 (265)
T PF04951_consen 147 GVPVVLVSGDD------ALCEEAKELLPWIVTVAVKEGIGRYAAISLHPAEACERIREAAKE 202 (265)
T ss_dssp T--EEEEEEEH------HHHHHHHTTSTT-EEEEEEEEEETTEEEE--HHHHHHHHHHHHHH
T ss_pred CCcEEEEeCcH------HHHHHHHHhCCCceEEEEecccCCCccccCCHHHHHHHHHHHHHH
Confidence 79999999965 567777888999988888876 344555677777777665443
No 306
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=27.85 E-value=4.1e+02 Score=23.12 Aligned_cols=56 Identities=11% Similarity=-0.027 Sum_probs=35.7
Q ss_pred ecCCCCCCCCCC-CCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh
Q 023416 35 VDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 35 ~D~~G~G~S~~~-~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
=|.|=-|.+=-. ...| =+.+.+.+.+-++.|+-. ...++|.|-|||..=|+.|+++
T Consensus 321 ~DpRleGGaFYlGs~ey-E~~I~~~I~~~L~~LgF~----~~qLILSGlSMGTfgAlYYga~ 377 (511)
T TIGR03712 321 GDPRLEGGAFYLGSDEY-EQGIINVIQEKLDYLGFD----HDQLILSGLSMGTFGALYYGAK 377 (511)
T ss_pred eccccccceeeeCcHHH-HHHHHHHHHHHHHHhCCC----HHHeeeccccccchhhhhhccc
Confidence 366655554221 1112 233444555666777643 5679999999999999999885
No 307
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=27.05 E-value=1.3e+02 Score=22.19 Aligned_cols=65 Identities=8% Similarity=0.072 Sum_probs=36.3
Q ss_pred CeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHh-CCCcccceeee
Q 023416 29 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK-NLVKPTAIAAV 106 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~-~~~~v~~lvl~ 106 (282)
++.++.+|-+|.... -.+..+.+.++++.... ...+.++..+++..-....... ....++++|+-
T Consensus 83 ~~D~vlIDT~Gr~~~--------d~~~~~el~~~~~~~~~-----~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 83 GYDLVLIDTAGRSPR--------DEELLEELKKLLEALNP-----DEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp TSSEEEEEE-SSSST--------HHHHHHHHHHHHHHHSS-----SEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred CCCEEEEecCCcchh--------hHHHHHHHHHHhhhcCC-----ccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 699999999986532 24556666777666641 3344455555555443322222 12346777764
No 308
>PRK14974 cell division protein FtsY; Provisional
Probab=26.93 E-value=3.2e+02 Score=22.34 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=36.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHHHHHHhC--CCcccceeee
Q 023416 29 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN--LVKPTAIAAV 106 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~~~~~~~--~~~v~~lvl~ 106 (282)
|+.++.+|-.|...++ ..+.+.+..+.+... ...++++.-+..|.=+..-+..+ ...++++|+-
T Consensus 222 ~~DvVLIDTaGr~~~~--------~~lm~eL~~i~~~~~------pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 222 GIDVVLIDTAGRMHTD--------ANLMDELKKIVRVTK------PDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCEEEEECCCccCCc--------HHHHHHHHHHHHhhC------CceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 6899999999766422 345566666666554 33444554444444444434332 2346677765
No 309
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=26.84 E-value=1.2e+02 Score=22.47 Aligned_cols=33 Identities=18% Similarity=0.326 Sum_probs=25.1
Q ss_pred CCceEEEc-ccHHHHHHHHHHHhCCCcccceeeecCC
Q 023416 74 ESDLVIFG-GGHAATLTVRAAKKNLVKPTAIAAVAPT 109 (282)
Q Consensus 74 ~~~~~l~G-~s~G~~~a~~~~~~~~~~v~~lvl~~p~ 109 (282)
..++.++| +.+|+.++..++.. -+..+++++..
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 56777777 77999999988875 35678888763
No 310
>PF03572 Peptidase_S41: Peptidase family S41; InterPro: IPR005151 This group of putative serine peptidases belong to the MEROPS peptidase family S41 (C-terminal processing peptidase family, clan SM). The members of this group include: the tricorn protease of bacteria and archaea, C-terminal peptidases with different substrates specificities in different species including processing of D1 protein of the photosystem II reaction centre in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein; and some appear to be responsible for degrading oligopeptides, probably derived from the proteasome. ; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 1N6F_D 1N6D_C 1N6E_C 1K32_A 3K50_A 3DJA_B 3DPM_B 3DPN_A 3DOR_B 1J7X_A ....
Probab=26.53 E-value=43 Score=23.59 Aligned_cols=28 Identities=21% Similarity=0.247 Sum_probs=18.9
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCCC
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLG 41 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G 41 (282)
....+..++..+.+. +..-+.+|+|+.+
T Consensus 16 ~~~~~~~~~~~~~~~----~~~~lIIDlR~N~ 43 (169)
T PF03572_consen 16 FDEELDEFLDKLKSK----DTDGLIIDLRGNG 43 (169)
T ss_dssp HHHHHHHHHHHHHHT----TSSEEEEE-TTB-
T ss_pred cHHHHHHHHHHHHHC----CCCEEEEEcccCC
Confidence 445566666666654 6999999999976
No 311
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=26.47 E-value=1.4e+02 Score=25.07 Aligned_cols=36 Identities=22% Similarity=0.354 Sum_probs=27.7
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCCcccceeeecCCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~p~~ 110 (282)
.++++++|+.+||+.++....+.+ .=-.++|+++..
T Consensus 3 ~~~iVIlGgGfgGl~~a~~l~~~~-~~~~itLVd~~~ 38 (405)
T COG1252 3 KKRIVILGGGFGGLSAAKRLARKL-PDVEITLVDRRD 38 (405)
T ss_pred CceEEEECCcHHHHHHHHHhhhcC-CCCcEEEEeCCC
Confidence 567999999999999998888765 212478888753
No 312
>PF04491 Pox_T4_N: Poxvirus T4 protein, N terminus; InterPro: IPR007580 Poxvirus T4 protein is thought to be secreted or retained in the endoplasmic reticulum if the protein also contains an additional C-terminal region (IPR007579 from INTERPRO). M-T4 of myxoma virus (O55698 from SWISSPROT) is thought to protect infected lymphocytes from apoptosis and modulate the inflammatory response to virus infection [].
Probab=26.18 E-value=53 Score=17.42 Aligned_cols=10 Identities=10% Similarity=-0.027 Sum_probs=8.1
Q ss_pred CCeEEEEecC
Q 023416 28 VNWRATIVDW 37 (282)
Q Consensus 28 ~g~~vi~~D~ 37 (282)
+||+|++.|-
T Consensus 36 NGfki~~hD~ 45 (46)
T PF04491_consen 36 NGFKIFAHDE 45 (46)
T ss_pred CcEEEEEecc
Confidence 4899999873
No 313
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=26.10 E-value=2e+02 Score=24.16 Aligned_cols=17 Identities=24% Similarity=0.411 Sum_probs=15.5
Q ss_pred eEEEEecCCCCCCCCCC
Q 023416 30 WRATIVDWPGLGYSDRP 46 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~~ 46 (282)
|.||.+|.|.|++|..-
T Consensus 291 fDlIilDPPsF~r~k~~ 307 (393)
T COG1092 291 FDLIILDPPSFARSKKQ 307 (393)
T ss_pred ccEEEECCcccccCccc
Confidence 99999999999999764
No 314
>PRK06193 hypothetical protein; Provisional
Probab=26.08 E-value=1.2e+02 Score=22.70 Aligned_cols=37 Identities=14% Similarity=0.277 Sum_probs=26.7
Q ss_pred CchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccHHHHHHH
Q 023416 50 YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTV 90 (282)
Q Consensus 50 ~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~G~~~a~ 90 (282)
.+.+.+.+++.++|+.+... +..++++||..+-....
T Consensus 135 ~~~~~y~~~l~~~I~~l~~~----~~~vLlVgHnp~i~~l~ 171 (206)
T PRK06193 135 ERNALLKAGLRPLLTTPPDP----GTNTVLVGHDDNLEAAT 171 (206)
T ss_pred hhHHHHHHHHHHHHhhCCCC----CCeEEEEeCchHHHHHh
Confidence 45666778888999888633 66799999996544333
No 315
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=26.05 E-value=1.3e+02 Score=23.19 Aligned_cols=16 Identities=38% Similarity=0.515 Sum_probs=13.8
Q ss_pred CeEEEEecCCCCCCCC
Q 023416 29 NWRATIVDWPGLGYSD 44 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~ 44 (282)
|..+..+|.||++.+.
T Consensus 78 g~~i~vIDTPGl~~~~ 93 (249)
T cd01853 78 GFKLNIIDTPGLLESV 93 (249)
T ss_pred CeEEEEEECCCcCcch
Confidence 6789999999999764
No 316
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=25.74 E-value=1.3e+02 Score=27.24 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=32.5
Q ss_pred eEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcc
Q 023416 30 WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGG 82 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~ 82 (282)
+..-.+-.||||++- +++++.++.+.+...++. |-++-+||.
T Consensus 630 ~kte~isCPgCGRT~-----~dlq~~~~~I~~~~~hl~------GvkiavMGC 671 (733)
T PLN02925 630 TKTEYVSCPSCGRTL-----FDLQEVSAEIREKTSHLP------GVSIAIMGC 671 (733)
T ss_pred cCCeEEECCCCCCcc-----ccHHHHHHHHHHHhhcCC------CceEEEEee
Confidence 344566789999864 568899999998888887 778888874
No 317
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=25.48 E-value=1.1e+02 Score=15.95 Aligned_cols=25 Identities=16% Similarity=0.321 Sum_probs=16.1
Q ss_pred eEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCC
Q 023416 30 WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPD 67 (282)
Q Consensus 30 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~ 67 (282)
.+|..+|+-||+. .+++..+++.+.
T Consensus 7 a~v~~~~fSgHad-------------~~~L~~~i~~~~ 31 (43)
T PF07521_consen 7 ARVEQIDFSGHAD-------------REELLEFIEQLN 31 (43)
T ss_dssp SEEEESGCSSS-B-------------HHHHHHHHHHHC
T ss_pred EEEEEEeecCCCC-------------HHHHHHHHHhcC
Confidence 5677888777763 455666776664
No 318
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=25.46 E-value=3.5e+02 Score=21.50 Aligned_cols=82 Identities=13% Similarity=0.106 Sum_probs=41.9
Q ss_pred HHHHHHHhhcCCCeEEEEe------cCCCCCCCCCCCCCCchHHHHHHHHHHhh--CCCCCCcCCCCceEEEcc--cHH-
Q 023416 17 VAQDIVQRVGKVNWRATIV------DWPGLGYSDRPKMDYNADVMEKFVVDLIN--APDSPVSSSESDLVIFGG--GHA- 85 (282)
Q Consensus 17 ~~~~L~~~~~~~g~~vi~~------D~~G~G~S~~~~~~~~~~~~~~~l~~~i~--~l~~~~~~~~~~~~l~G~--s~G- 85 (282)
.+..|... |++|.++ ..+|||..... ....+.+.+.+.++.+ .+. .-+.++.|. |-+
T Consensus 20 A~f~lq~~----G~~V~~vpTV~fSnHtgyg~~~g~--v~~~e~l~~~l~~l~~~~~~~------~~davltGYlgs~~q 87 (281)
T COG2240 20 AIFPLQRL----GLDVWAVPTVQFSNHTGYGKWTGI--VMPPEQLADLLNGLEAIDKLG------ECDAVLTGYLGSAEQ 87 (281)
T ss_pred HHHHHHHc----CCceeeeceEEecCCCCCCCCCCc--CCCHHHHHHHHHHHHhccccc------ccCEEEEccCCCHHH
Confidence 45566666 7876554 89999986442 2333444444444333 222 456777773 222
Q ss_pred -HHHHHHHHHhCCCcccceeeecCCC
Q 023416 86 -ATLTVRAAKKNLVKPTAIAAVAPTW 110 (282)
Q Consensus 86 -~~~a~~~~~~~~~~v~~lvl~~p~~ 110 (282)
-.++-....-.....+.+++++|..
T Consensus 88 v~~i~~~v~~vk~~~P~~~~l~DPVM 113 (281)
T COG2240 88 VRAIAGIVKAVKEANPNALYLCDPVM 113 (281)
T ss_pred HHHHHHHHHHHhccCCCeEEEeCCcc
Confidence 2222222221222344778888863
No 319
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=25.39 E-value=58 Score=26.12 Aligned_cols=17 Identities=18% Similarity=0.180 Sum_probs=15.1
Q ss_pred EEEcccHHHHHHHHHHH
Q 023416 78 VIFGGGHAATLTVRAAK 94 (282)
Q Consensus 78 ~l~G~s~G~~~a~~~~~ 94 (282)
++.|-|+||.+|+.++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 46899999999999886
No 320
>PLN02840 tRNA dimethylallyltransferase
Probab=25.18 E-value=58 Score=27.40 Aligned_cols=32 Identities=13% Similarity=0.044 Sum_probs=25.1
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEccc
Q 023416 48 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGG 83 (282)
Q Consensus 48 ~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s 83 (282)
..|+..+|.++..+.++.+... +...+|+|++
T Consensus 88 e~ySv~~F~~~A~~~I~~i~~r----gkiPIvVGGT 119 (421)
T PLN02840 88 DDYSVGAFFDDARRATQDILNR----GRVPIVAGGT 119 (421)
T ss_pred CceeHHHHHHHHHHHHHHHHhc----CCCEEEEcCc
Confidence 5789999999999998876432 6667888886
No 321
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=25.03 E-value=1e+02 Score=24.54 Aligned_cols=22 Identities=23% Similarity=0.024 Sum_probs=18.5
Q ss_pred CCceEEEcccHHHHHHHHHHHh
Q 023416 74 ESDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~ 95 (282)
...-++.|-|+|+.++..+|..
T Consensus 38 i~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 38 IPIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred CCccEEEecCHHHHHHHHHHcC
Confidence 3567789999999999999873
No 322
>cd06896 PX_PI3K_C2_gamma The phosphoinositide binding Phox Homology Domain of the Gamma Isoform of Class II Phosphoinositide 3-Kinases. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 dom
Probab=24.80 E-value=1.8e+02 Score=18.75 Aligned_cols=42 Identities=19% Similarity=0.216 Sum_probs=29.4
Q ss_pred HHHHHhccCCceEEEeCCc-ccCCCCChHHHHHHHHHHHHhhc
Q 023416 237 MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 278 (282)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-H~~~~e~p~~~~~~i~~fl~~~~ 278 (282)
...+++..|...+-.+|+. |.+.....++-...+..++.+.-
T Consensus 40 H~~L~~~FP~~~LP~fP~~~~~~~~~~~~~R~~~L~~Yl~~Ll 82 (101)
T cd06896 40 HSQLQKQFPSLALPEFPHWWHLPFTDSDHKRVRDLNHYLEQLL 82 (101)
T ss_pred HHHHHHHCccccccCCCCccccCcccHHHHHHHHHHHHHHHHH
Confidence 3355667888878888998 88777666666667777776643
No 323
>PF06961 DUF1294: Protein of unknown function (DUF1294); InterPro: IPR010718 This family includes a number of hypothetical bacterial and archaeal proteins of unknown function.
Probab=24.68 E-value=29 Score=19.49 Aligned_cols=16 Identities=25% Similarity=0.343 Sum_probs=12.7
Q ss_pred EEcccHHHHHHHHHHH
Q 023416 79 IFGGGHAATLTVRAAK 94 (282)
Q Consensus 79 l~G~s~G~~~a~~~~~ 94 (282)
++|++.|+.+++..-.
T Consensus 32 ~~GG~~Ga~~~m~~fr 47 (55)
T PF06961_consen 32 LLGGWPGALLGMYLFR 47 (55)
T ss_pred HHHhHHHHHHHHHHhc
Confidence 4889999999887654
No 324
>PLN02748 tRNA dimethylallyltransferase
Probab=24.46 E-value=67 Score=27.51 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=26.4
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcccH
Q 023416 48 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGH 84 (282)
Q Consensus 48 ~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~s~ 84 (282)
..|+..+|..+....|+.+... +.-.+|+|++.
T Consensus 89 e~ysv~~F~~~A~~~I~~I~~r----gk~PIlVGGTg 121 (468)
T PLN02748 89 VEFTAKDFRDHAVPLIEEILSR----NGLPVIVGGTN 121 (468)
T ss_pred CcCcHHHHHHHHHHHHHHHHhc----CCCeEEEcChH
Confidence 5799999999999999876433 66788899873
No 325
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=24.01 E-value=1.1e+02 Score=23.93 Aligned_cols=20 Identities=15% Similarity=-0.105 Sum_probs=16.6
Q ss_pred ceEEEcccHHHHHHHHHHHh
Q 023416 76 DLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 76 ~~~l~G~s~G~~~a~~~~~~ 95 (282)
.=.+.|-|+|+.++..|+..
T Consensus 39 ~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 39 IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred ccEEEEECHHHHHHHHHHcC
Confidence 34568999999999999874
No 326
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.84 E-value=85 Score=20.90 Aligned_cols=23 Identities=17% Similarity=0.186 Sum_probs=19.2
Q ss_pred chHHHHHHHHHhhcCCCeEEEEecCCC
Q 023416 13 EWRLVAQDIVQRVGKVNWRATIVDWPG 39 (282)
Q Consensus 13 ~w~~~~~~L~~~~~~~g~~vi~~D~~G 39 (282)
.+-.+++.|+++ |+.|++.|.--
T Consensus 24 ~~~~VA~~L~e~----g~dv~atDI~~ 46 (129)
T COG1255 24 FFLDVAKRLAER----GFDVLATDINE 46 (129)
T ss_pred hHHHHHHHHHHc----CCcEEEEeccc
Confidence 456789999998 89999999743
No 327
>KOG0341 consensus DEAD-box protein abstrakt [RNA processing and modification]
Probab=23.70 E-value=3.7e+02 Score=22.61 Aligned_cols=56 Identities=11% Similarity=0.174 Sum_probs=34.8
Q ss_pred CccEEEEecCCCCCCCHHHHHHHHhccCCc--------eEEEeCCc-ccCCCCChHHHHHHHHHH
Q 023416 218 KLPLLVVSTEGSPRRSKAEMEALKGAKGVT--------KFVEVPGA-LLPQEEYPAMVAQELYQF 273 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~-H~~~~e~p~~~~~~i~~f 273 (282)
.+-..-|||.+|.--.....+.++....++ +-.-+|+- |.+..+.|+++.+.+...
T Consensus 445 GVEavaIHGGKDQedR~~ai~afr~gkKDVLVATDVASKGLDFp~iqHVINyDMP~eIENYVHRI 509 (610)
T KOG0341|consen 445 GVEAVAIHGGKDQEDRHYAIEAFRAGKKDVLVATDVASKGLDFPDIQHVINYDMPEEIENYVHRI 509 (610)
T ss_pred cceeEEeecCcchhHHHHHHHHHhcCCCceEEEecchhccCCCccchhhccCCChHHHHHHHHHh
Confidence 456666777777543333444454332222 12347888 999999999988776653
No 328
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=23.45 E-value=1.2e+02 Score=21.62 Aligned_cols=21 Identities=19% Similarity=0.047 Sum_probs=17.4
Q ss_pred CceEEEcccHHHHHHHHHHHh
Q 023416 75 SDLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 75 ~~~~l~G~s~G~~~a~~~~~~ 95 (282)
..-.+.|-|.|+.++..++..
T Consensus 26 ~~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 26 LIDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred CCCEEEEECHHHHHHHHHHcC
Confidence 355679999999999998874
No 329
>PF02044 Bombesin: Bombesin-like peptide; InterPro: IPR000874 Bombesin-like peptides comprise a large family of peptides which were initially isolated from amphibian skin, where they stimulate smooth muscle contraction. They were later found to be widely distributed in mammalian neural and endocrine cells. The amphibian peptides which belong to this family are currently classified into three subfamilies [, ]; the Bombesin group, which includes bombesin and alytesin; the Ranatensin group, which includes ranatensins, litorin, and Rohdei litorin; and the Phyllolitorin group, which includes Leu(8)- and Phe(8)-phyllolitorins. In mammals and birds two categories of bombesin-like peptides are known [, ], gastrin-releasing peptide (GRP), which stimulates the release of gastrin as well as other gastrointestinal hormones, and neuromedin B (NMB), a neuropeptide whose function is not yet clear. Bombesin-like peptides, like many other active peptides, are synthesized as larger protein precursors that are enzymatically converted to their mature forms. The final peptides are eight to fourteen residues long.; GO: 0007218 neuropeptide signaling pathway; PDB: 1C9A_A 1C98_A.
Probab=23.35 E-value=19 Score=13.61 Aligned_cols=6 Identities=17% Similarity=-0.037 Sum_probs=2.2
Q ss_pred EcccHH
Q 023416 80 FGGGHA 85 (282)
Q Consensus 80 ~G~s~G 85 (282)
+||-||
T Consensus 6 vGh~Mg 11 (14)
T PF02044_consen 6 VGHFMG 11 (14)
T ss_dssp HHCT--
T ss_pred eeeeec
Confidence 455555
No 330
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=23.30 E-value=73 Score=25.24 Aligned_cols=16 Identities=38% Similarity=0.590 Sum_probs=12.8
Q ss_pred CeEEEEecCCCCCCCCC
Q 023416 29 NWRATIVDWPGLGYSDR 45 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~ 45 (282)
+-++|++| ||||..+.
T Consensus 55 ~~~~IvID-pGHGG~Dp 70 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDT 70 (287)
T ss_pred CCeEEEEE-CCCCCCCC
Confidence 35789999 69998875
No 331
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=22.47 E-value=1.4e+02 Score=24.33 Aligned_cols=19 Identities=16% Similarity=-0.164 Sum_probs=15.2
Q ss_pred ceEEEcccHHHHHHHHHHH
Q 023416 76 DLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 76 ~~~l~G~s~G~~~a~~~~~ 94 (282)
+-.++|||+|=+.|+..+.
T Consensus 125 ~~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 125 VDVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CCeeeeccHHHHHHHHHhC
Confidence 3467999999988887764
No 332
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=22.40 E-value=2.9e+02 Score=22.53 Aligned_cols=80 Identities=11% Similarity=0.008 Sum_probs=49.2
Q ss_pred HHHHHHHhhcCCCeEEEEecCCCCCCCCCC----------C------CCCchHHHHHHHHHH-hhCCCCCCcCCCCceEE
Q 023416 17 VAQDIVQRVGKVNWRATIVDWPGLGYSDRP----------K------MDYNADVMEKFVVDL-INAPDSPVSSSESDLVI 79 (282)
Q Consensus 17 ~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~----------~------~~~~~~~~~~~l~~~-i~~l~~~~~~~~~~~~l 79 (282)
+...|... .+-+++++=-+|-|--.-. . ...++..-+.....| +++.. +|..+++
T Consensus 55 Ly~sl~r~---d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~ye-----pGD~Iy~ 126 (423)
T COG3673 55 LYASLQRA---DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYE-----PGDEIYA 126 (423)
T ss_pred HHHHHhcC---CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEE
Confidence 44455542 4788999988998843111 0 111222222222222 23333 3899999
Q ss_pred EcccHHHHHHHHHHHhCCCcccceeeecC
Q 023416 80 FGGGHAATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 80 ~G~s~G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
+|.|-|+..|.-+|.- +.++-|++-
T Consensus 127 FGFSRGAf~aRVlagm----ir~vGlls~ 151 (423)
T COG3673 127 FGFSRGAFSARVLAGM----IRHVGLLSR 151 (423)
T ss_pred eeccchhHHHHHHHHH----HHHhhhhcc
Confidence 9999999999999886 777777754
No 333
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=22.06 E-value=1.3e+02 Score=21.88 Aligned_cols=20 Identities=15% Similarity=-0.001 Sum_probs=16.8
Q ss_pred ceEEEcccHHHHHHHHHHHh
Q 023416 76 DLVIFGGGHAATLTVRAAKK 95 (282)
Q Consensus 76 ~~~l~G~s~G~~~a~~~~~~ 95 (282)
.=++.|-|.|+.+|..++..
T Consensus 28 ~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 28 KKRVAGTSAGAITAALLALG 47 (194)
T ss_pred cceEEEECHHHHHHHHHHcC
Confidence 35679999999999998863
No 334
>PRK09936 hypothetical protein; Provisional
Probab=21.93 E-value=1.7e+02 Score=23.29 Aligned_cols=50 Identities=12% Similarity=0.177 Sum_probs=35.8
Q ss_pred cccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCC
Q 023416 10 TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPD 67 (282)
Q Consensus 10 s~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~ 67 (282)
+-..|+.+...+... |++.+.+-+-++|.|+-... +-+...+.+.....+
T Consensus 36 ~~~qWq~~~~~~~~~----G~~tLivQWt~yG~~~fg~~----~g~La~~l~~A~~~G 85 (296)
T PRK09936 36 TDTQWQGLWSQLRLQ----GFDTLVVQWTRYGDADFGGQ----RGWLAKRLAAAQQAG 85 (296)
T ss_pred CHHHHHHHHHHHHHc----CCcEEEEEeeeccCCCcccc----hHHHHHHHHHHHHcC
Confidence 457899999999998 99999999999999854322 344444444444443
No 335
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=21.84 E-value=1.1e+02 Score=22.14 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=20.7
Q ss_pred ceEEEcccHHHHHHHHHHHhCCCcccceeeec
Q 023416 76 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 107 (282)
Q Consensus 76 ~~~l~G~s~G~~~a~~~~~~~~~~v~~lvl~~ 107 (282)
+++++|++.+|+.+.....+. -..++++.
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~---~~~v~ii~ 29 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARP---GAKVLIIE 29 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHT---TSEEEEES
T ss_pred CEEEEecHHHHHHHHHHHhcC---CCeEEEEe
Confidence 378999999999998887742 22455553
No 336
>COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only]
Probab=21.80 E-value=1e+02 Score=22.34 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=24.9
Q ss_pred CCceEEEeCCc-ccCCCCCh-HHHHHHHHHHHHh
Q 023416 245 GVTKFVEVPGA-LLPQEEYP-AMVAQELYQFLQQ 276 (282)
Q Consensus 245 ~~~~~~~~~~~-H~~~~e~p-~~~~~~i~~fl~~ 276 (282)
.+...+++||| |......+ +.+.+.+.+|.+.
T Consensus 65 ~~ydal~ipGG~~~~~~~~~~~~~~~~v~~~~~~ 98 (188)
T COG0693 65 ADYDALVIPGGDHGPEYLRPDPDLLAFVRDFYAN 98 (188)
T ss_pred hHCCEEEECCCccchhhccCcHHHHHHHHHHHHc
Confidence 35678999999 99888877 7777777777654
No 337
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=21.60 E-value=5.1e+02 Score=22.10 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=19.3
Q ss_pred CeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhhCCC
Q 023416 29 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPD 67 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~~l~ 67 (282)
+|.++.+|-+|....+ +...+.+..+.+.+.
T Consensus 182 ~~DvVIIDTaGr~~~d--------~~l~~eL~~i~~~~~ 212 (428)
T TIGR00959 182 GFDVVIVDTAGRLQID--------EELMEELAAIKEILN 212 (428)
T ss_pred CCCEEEEeCCCccccC--------HHHHHHHHHHHHhhC
Confidence 6999999999865422 234455555554443
No 338
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=21.48 E-value=1.2e+02 Score=26.63 Aligned_cols=21 Identities=5% Similarity=-0.130 Sum_probs=17.7
Q ss_pred CCceEEEcccHHHHHHHHHHH
Q 023416 74 ESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~ 94 (282)
..+-.++|||+|=..|+..+.
T Consensus 264 I~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 264 IKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 567789999999988887775
No 339
>PRK09620 hypothetical protein; Provisional
Probab=21.25 E-value=1.5e+02 Score=22.54 Aligned_cols=33 Identities=6% Similarity=0.048 Sum_probs=26.5
Q ss_pred ccCcccccchHHHHHHHHHhhcCCCeEEEEecCCCCC
Q 023416 5 ISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLG 41 (282)
Q Consensus 5 ~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G 41 (282)
+++.||.+.=..+++.|..+ |+.|+.+|-++.+
T Consensus 23 itN~SSGfiGs~LA~~L~~~----Ga~V~li~g~~~~ 55 (229)
T PRK09620 23 HTNMAKGTIGRIIAEELISK----GAHVIYLHGYFAE 55 (229)
T ss_pred ecCCCcCHHHHHHHHHHHHC----CCeEEEEeCCCcC
Confidence 56677777778899999998 9999999866543
No 340
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.05 E-value=1.9e+02 Score=23.16 Aligned_cols=37 Identities=8% Similarity=0.127 Sum_probs=26.6
Q ss_pred HHHHHHhhCCCCCCcCCCCceEEEccc--HHHHHHHHHHHh
Q 023416 57 KFVVDLINAPDSPVSSSESDLVIFGGG--HAATLTVRAAKK 95 (282)
Q Consensus 57 ~~l~~~i~~l~~~~~~~~~~~~l~G~s--~G~~~a~~~~~~ 95 (282)
.-+.+++++.+.+.. |..+.++|.| ||..+|..+..+
T Consensus 144 ~aii~lL~~~~i~l~--Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 144 SGCLRLLEDTCGDLT--GKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHhCCCCC--CCEEEEECCCCccHHHHHHHHHHC
Confidence 345566666554333 8899999975 999999988765
No 341
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=21.00 E-value=1.4e+02 Score=24.20 Aligned_cols=65 Identities=20% Similarity=0.184 Sum_probs=44.7
Q ss_pred eEEEEecCC-CCCCCCCCC---CCCchHHHHHHHHHHhhCCCCCCcC-CCCceEEEcccHHHHHHHHHHH
Q 023416 30 WRATIVDWP-GLGYSDRPK---MDYNADVMEKFVVDLINAPDSPVSS-SESDLVIFGGGHAATLTVRAAK 94 (282)
Q Consensus 30 ~~vi~~D~~-G~G~S~~~~---~~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~l~G~s~G~~~a~~~~~ 94 (282)
-.++.+|.| |-|.|-... ..-+..+.+.|+.++++.+-..... -..|++++--|.||-+|..++.
T Consensus 72 adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al 141 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFAL 141 (414)
T ss_pred ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhh
Confidence 456777766 788874422 3345678888988888765422111 2568999999999999888765
No 342
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=20.88 E-value=4.6e+02 Score=21.51 Aligned_cols=52 Identities=6% Similarity=0.054 Sum_probs=30.5
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCcCCCCceEEEcc-cHHHHHHHHHHHhCCCcccceeeecC
Q 023416 48 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGG-GHAATLTVRAAKKNLVKPTAIAAVAP 108 (282)
Q Consensus 48 ~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~l~G~-s~G~~~a~~~~~~~~~~v~~lvl~~p 108 (282)
...|+...+..+.+....+. +.++.++|. -||..++-.+..+ .+..+++++-
T Consensus 154 ~~vSv~s~av~~~~~~~~l~------~k~vLvIGaGem~~l~a~~L~~~---g~~~i~v~nR 206 (338)
T PRK00676 154 AEVTIESVVQQELRRRQKSK------KASLLFIGYSEINRKVAYYLQRQ---GYSRITFCSR 206 (338)
T ss_pred CCcCHHHHHHHHHHHhCCcc------CCEEEEEcccHHHHHHHHHHHHc---CCCEEEEEcC
Confidence 44566665555555444454 788999985 4555555555543 2345666654
No 343
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=20.82 E-value=1.1e+02 Score=22.35 Aligned_cols=29 Identities=7% Similarity=0.200 Sum_probs=15.2
Q ss_pred cccCcccccchHHHHHHHHHhhcCCCeEEEEec
Q 023416 4 TISDVSTVEEWRLVAQDIVQRVGKVNWRATIVD 36 (282)
Q Consensus 4 ~~~~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D 36 (282)
|+|++.-+.-=..+.+.|.+. |++++.+|
T Consensus 30 GLSGsGKSTiA~ale~~L~~~----G~~~y~LD 58 (197)
T COG0529 30 GLSGSGKSTIANALEEKLFAK----GYHVYLLD 58 (197)
T ss_pred cCCCCCHHHHHHHHHHHHHHc----CCeEEEec
Confidence 444443333334455555555 67777775
No 344
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=20.79 E-value=2.8e+02 Score=23.10 Aligned_cols=42 Identities=17% Similarity=0.130 Sum_probs=26.7
Q ss_pred CccEEEEecCCCCCCCH--HHHHHHHhccCC-----ceEEEeCCc-ccCC
Q 023416 218 KLPLLVVSTEGSPRRSK--AEMEALKGAKGV-----TKFVEVPGA-LLPQ 259 (282)
Q Consensus 218 ~~P~lii~G~~D~~~~~--~~~~~~~~~~~~-----~~~~~~~~~-H~~~ 259 (282)
++-+++++|+++.+.+. +.++.+.+..++ .++.+-++| |.-+
T Consensus 302 ~~~vfVi~Ge~EvfrddI~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 302 KYSVFVIYGEDEVFRDDILEWAKKLNDVKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred CCcEEEEECCccccHHHHHHHHHHHhhcCccccCCcceEEEecCCccccc
Confidence 56899999999866553 344444433333 456677778 9853
No 345
>PF04548 AIG1: AIG1 family; InterPro: IPR006703 This entry represents a domain found in Arabidopsis protein AIG1 which appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 (avrRpt2-induced gene) exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2 []. The domain is also apparently found in a number of mammalian proteins, for example the rat immune-associated nucleotide 4 protein. ; GO: 0005525 GTP binding; PDB: 3LXX_A 3BB4_A 3DEF_A 3BB3_A 2J3E_A 3V70_B 3BB1_A 1H65_B 2XTP_A 3P1J_C ....
Probab=20.62 E-value=1.2e+02 Score=22.54 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=19.6
Q ss_pred CeEEEEecCCCCCCCCCCCCCCchHHHHHHHHHHhh
Q 023416 29 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLIN 64 (282)
Q Consensus 29 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~i~ 64 (282)
|..|..+|-||++.+.. +-++....+...+.
T Consensus 48 g~~v~VIDTPGl~d~~~-----~~~~~~~~i~~~l~ 78 (212)
T PF04548_consen 48 GRQVTVIDTPGLFDSDG-----SDEEIIREIKRCLS 78 (212)
T ss_dssp TEEEEEEE--SSEETTE-----EHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCCCcc-----cHHHHHHHHHHHHH
Confidence 68999999999987653 34455555555443
No 346
>PF13728 TraF: F plasmid transfer operon protein
Probab=20.30 E-value=2e+02 Score=21.70 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=28.8
Q ss_pred CcccccchHHHHHHHHHhhcCCCeEEEEecCCCCCCCCCCC
Q 023416 7 DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK 47 (282)
Q Consensus 7 ~~ss~~~w~~~~~~L~~~~~~~g~~vi~~D~~G~G~S~~~~ 47 (282)
+|.-.....+++..|++. .|+.|+.+++=|.|...-|.
T Consensus 131 ~C~~C~~~~pil~~~~~~---yg~~v~~vs~DG~~~~~fp~ 168 (215)
T PF13728_consen 131 DCPYCQQQAPILQQFADK---YGFSVIPVSLDGRPIPSFPN 168 (215)
T ss_pred CCchhHHHHHHHHHHHHH---hCCEEEEEecCCCCCcCCCC
Confidence 344455667888888887 68999999999988775554
No 347
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=20.05 E-value=1.8e+02 Score=24.60 Aligned_cols=25 Identities=8% Similarity=0.092 Sum_probs=20.1
Q ss_pred CCceEEEcccHHHHHHHHHHHhCCC
Q 023416 74 ESDLVIFGGGHAATLTVRAAKKNLV 98 (282)
Q Consensus 74 ~~~~~l~G~s~G~~~a~~~~~~~~~ 98 (282)
.+.++++++|.+|..++..+.-.|.
T Consensus 82 d~t~flvnGsT~g~~a~i~a~~~~g 106 (417)
T PF01276_consen 82 DKTFFLVNGSTSGNQAMIMALCRPG 106 (417)
T ss_dssp SEEEEESSHHHHHHHHHHHHHTTTT
T ss_pred CeEEEEecCchHHHHHHHHHhcCCC
Confidence 5678999999999999988875443
Done!