BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023422
         (282 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2NXF|A Chain A, Crystal Structure Of A Dimetal Phosphatase From Danio
           Rerio Loc 393393
          Length = 322

 Score =  170 bits (431), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 15/285 (5%)

Query: 11  VLQNAVQRWNNHQKLKFVIHFGDIVDGFCPK-DQSLEAVKKVVNEFEKFNGPAYHMIGNH 69
           +L++AV +W   ++++ V+  GDI+DG   + D S  A+  V  E +  +   +H+ GNH
Sbjct: 39  LLRDAVLQWRR-ERVQCVVQLGDIIDGHNRRRDASDRALDTVXAELDACSVDVHHVWGNH 97

Query: 70  CLYNLPRHMLLPLLKISSV------------DGRAYYDFSPTPEYRFVVLDGYDISAIGW 117
             YN  R  LL     S+             D    Y+FSP P +RFV+LD YD+S IG 
Sbjct: 98  EFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGR 157

Query: 118 PHNHPNTLEALKFLGEKNPNTEK-NSPAGLVGLERRFLMFNGAVGKEQIKWLDAVLQDAT 176
                    + + L + N N +  N P   VGLE+RF+ FNG   ++Q++WLDAVL  + 
Sbjct: 158 EEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSD 217

Query: 177 KLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLAGHDHQGGHSIDTHG 236
              ++V++  H+P+ P +A P  L WN   V+ V+  +  V   +AGHDH GG   D+ G
Sbjct: 218 HKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSG 277

Query: 237 IHHRVLEAALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDMCFT 281
             H  LE  +E PP + AF     Y+DR    G GR++   + ++
Sbjct: 278 AQHITLEGVIETPPHSHAFATAYLYEDRXVXKGRGRVEDLTITYS 322


>pdb|1O8O|A Chain A, The Active Site Of The Molybdenum Cofactor Biosynthetic
           Protein Domain Cnx1g
 pdb|1O8O|B Chain B, The Active Site Of The Molybdenum Cofactor Biosynthetic
           Protein Domain Cnx1g
 pdb|1O8O|C Chain C, The Active Site Of The Molybdenum Cofactor Biosynthetic
           Protein Domain Cnx1g
          Length = 167

 Score = 36.2 bits (82), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 29/100 (29%)

Query: 12  LQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNE----------------- 54
           +++ +Q+W++  ++  ++  G   DGF P+D + EA KKV+                   
Sbjct: 59  IKDILQKWSDVDEMDLILTLGG--DGFTPRDVTPEATKKVIERETPGLLFVMMQESLKIT 116

Query: 55  -FEKFNGPAYHMIGNHCLYNLP---------RHMLLPLLK 84
            F   +  A  + G+  + N+P            LLP LK
Sbjct: 117 PFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALK 156


>pdb|1UUX|A Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links
           Molybdenum And Copper Metabolism
          Length = 163

 Score = 33.9 bits (76), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 29/100 (29%)

Query: 12  LQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNE----------------- 54
           +++ +Q+W++  ++  ++  G    GF P+D + EA KKV+                   
Sbjct: 59  IKDILQKWSDVDEMDLILTLGGT--GFTPRDVTPEATKKVIERETPGLLFVMMQESLKIT 116

Query: 55  -FEKFNGPAYHMIGNHCLYNLP---------RHMLLPLLK 84
            F   +  A  + G+  + N+P            LLP LK
Sbjct: 117 PFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALK 156


>pdb|1O8Q|A Chain A, The Active Site Of The Molybdenum Cofactor Biosenthetic
           Protein Domain Cnx1g
 pdb|1O8Q|B Chain B, The Active Site Of The Molybdenum Cofactor Biosenthetic
           Protein Domain Cnx1g
 pdb|1O8Q|C Chain C, The Active Site Of The Molybdenum Cofactor Biosenthetic
           Protein Domain Cnx1g
 pdb|1O8Q|D Chain D, The Active Site Of The Molybdenum Cofactor Biosenthetic
           Protein Domain Cnx1g
 pdb|1O8Q|E Chain E, The Active Site Of The Molybdenum Cofactor Biosenthetic
           Protein Domain Cnx1g
 pdb|1O8Q|F Chain F, The Active Site Of The Molybdenum Cofactor Biosenthetic
           Protein Domain Cnx1g
 pdb|1O8Q|G Chain G, The Active Site Of The Molybdenum Cofactor Biosenthetic
           Protein Domain Cnx1g
 pdb|1O8Q|H Chain H, The Active Site Of The Molybdenum Cofactor Biosenthetic
           Protein Domain Cnx1g
          Length = 167

 Score = 33.9 bits (76), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 29/100 (29%)

Query: 12  LQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNE----------------- 54
           +++ +Q+W++  ++  ++  G    GF P+D + EA KKV+                   
Sbjct: 59  IKDILQKWSDVDEMDLILTLGGT--GFTPRDVTPEATKKVIERETPGLLFVMMQEALKIT 116

Query: 55  -FEKFNGPAYHMIGNHCLYNLP---------RHMLLPLLK 84
            F   +  A  + G+  + N+P            LLP LK
Sbjct: 117 PFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALK 156


>pdb|1UUY|A Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links
          Molybdenum And Copper Metabolism
          Length = 167

 Score = 33.5 bits (75), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 12 LQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVN 53
          +++ +Q+W++  ++  ++  G    GF P+D + EA KKV+ 
Sbjct: 59 IKDILQKWSDVDEMDLILTLGGT--GFTPRDVTPEATKKVIE 98


>pdb|1O8N|A Chain A, The Active Site Of The Molybdenum Cofactor Biosynthetic
           Protein Domain Cnx1g
 pdb|1O8N|B Chain B, The Active Site Of The Molybdenum Cofactor Biosynthetic
           Protein Domain Cnx1g
 pdb|1O8N|C Chain C, The Active Site Of The Molybdenum Cofactor Biosynthetic
           Protein Domain Cnx1g
          Length = 167

 Score = 33.5 bits (75), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 29/100 (29%)

Query: 12  LQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNE----------------- 54
           +++ +Q+W++  ++  ++  G    GF P+D + EA KKV+                   
Sbjct: 59  IKDILQKWSDVDEMDLILTLGGA--GFTPRDVTPEATKKVIERETPGLLFVMMQESLKIT 116

Query: 55  -FEKFNGPAYHMIGNHCLYNLP---------RHMLLPLLK 84
            F   +  A  + G+  + N+P            LLP LK
Sbjct: 117 PFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALK 156


>pdb|1EAV|A Chain A, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
          Domains - Comparative Analysis And Functional
          Implications
 pdb|1EAV|B Chain B, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
          Domains - Comparative Analysis And Functional
          Implications
 pdb|1EAV|C Chain C, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
          Domains - Comparative Analysis And Functional
          Implications
 pdb|1EAV|D Chain D, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
          Domains - Comparative Analysis And Functional
          Implications
 pdb|1EAV|E Chain E, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
          Domains - Comparative Analysis And Functional
          Implications
 pdb|1EAV|F Chain F, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
          Domains - Comparative Analysis And Functional
          Implications
 pdb|1EAV|G Chain G, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
          Domains - Comparative Analysis And Functional
          Implications
 pdb|1EAV|H Chain H, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
          Domains - Comparative Analysis And Functional
          Implications
          Length = 162

 Score = 32.0 bits (71), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 12 LQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVN 53
          +++ +Q+W++  +   ++  G    GF P+D + EA KKV+ 
Sbjct: 59 IKDILQKWSDVDEXDLILTLGGT--GFTPRDVTPEATKKVIE 98


>pdb|1V4P|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase From
           Pyrococcus Horikoshii Ot3
 pdb|1V4P|B Chain B, Crystal Structure Of Alanyl-Trna Synthetase From
           Pyrococcus Horikoshii Ot3
 pdb|1V4P|C Chain C, Crystal Structure Of Alanyl-Trna Synthetase From
           Pyrococcus Horikoshii Ot3
 pdb|1WXO|A Chain A, Structure Of Archaeal Trans-Editing Protein Alax In
           Complex With Zinc
 pdb|1WXO|B Chain B, Structure Of Archaeal Trans-Editing Protein Alax In
           Complex With Zinc
 pdb|1WXO|C Chain C, Structure Of Archaeal Trans-Editing Protein Alax In
           Complex With Zinc
          Length = 157

 Score = 31.6 bits (70), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 17/85 (20%)

Query: 40  PKDQSLEAVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLLKISSVDGRAYYDFSPT 99
           P D+ +  ++++ NE  K N P         +Y LPR     +       G   YD  P 
Sbjct: 50  PSDEEIREIERLANEKVKENAPIK-------IYELPREEAEKMF------GEDMYDLFPV 96

Query: 100 PE----YRFVVLDGYDISAIGWPHN 120
           PE     + VV++ ++++A    H 
Sbjct: 97  PEDVRILKVVVIEDWNVNACNKEHT 121


>pdb|1V7O|A Chain A, Alanyl-Trna Synthetase Editing Domain Homologue Protein
           From Pyrococcus Horikoshii
 pdb|1V7O|B Chain B, Alanyl-Trna Synthetase Editing Domain Homologue Protein
           From Pyrococcus Horikoshii
 pdb|1WNU|A Chain A, Structure Of Archaeal Trans-Editing Protein Alax In
           Complex With L- Serine
 pdb|1WNU|B Chain B, Structure Of Archaeal Trans-Editing Protein Alax In
           Complex With L- Serine
          Length = 165

 Score = 30.4 bits (67), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 17/85 (20%)

Query: 40  PKDQSLEAVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLLKISSVDGRAYYDFSPT 99
           P D+ +  ++++ NE  K N P         +Y LPR       +     G   YD  P 
Sbjct: 50  PSDEEIREIERLANEKVKENAPIK-------IYELPRE------EAEKXFGEDXYDLFPV 96

Query: 100 PE----YRFVVLDGYDISAIGWPHN 120
           PE     + VV++ ++++A    H 
Sbjct: 97  PEDVRILKVVVIEDWNVNACNKEHT 121


>pdb|2QEZ|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase Heavy
           Chain (Yp_013784.1) From Listeria Monocytogenes 4b F2365
           At 2.15 A Resolution
 pdb|2QEZ|B Chain B, Crystal Structure Of Ethanolamine Ammonia-Lyase Heavy
           Chain (Yp_013784.1) From Listeria Monocytogenes 4b F2365
           At 2.15 A Resolution
 pdb|2QEZ|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase Heavy
           Chain (Yp_013784.1) From Listeria Monocytogenes 4b F2365
           At 2.15 A Resolution
 pdb|2QEZ|D Chain D, Crystal Structure Of Ethanolamine Ammonia-Lyase Heavy
           Chain (Yp_013784.1) From Listeria Monocytogenes 4b F2365
           At 2.15 A Resolution
 pdb|2QEZ|E Chain E, Crystal Structure Of Ethanolamine Ammonia-Lyase Heavy
           Chain (Yp_013784.1) From Listeria Monocytogenes 4b F2365
           At 2.15 A Resolution
 pdb|2QEZ|F Chain F, Crystal Structure Of Ethanolamine Ammonia-Lyase Heavy
           Chain (Yp_013784.1) From Listeria Monocytogenes 4b F2365
           At 2.15 A Resolution
          Length = 455

 Score = 28.9 bits (63), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 31  FGDIVDGFCPKDQSLEAVKKVVNEFEKF 58
            GD V G  P D S ++V +++N+FE+F
Sbjct: 186 IGDAVIGLNPVDDSTDSVVRLLNKFEEF 213


>pdb|1KKU|A Chain A, Crystal Structure Of Nuclear Human Nicotinamide
           Mononucleotide Adenylyltransferase
          Length = 279

 Score = 28.9 bits (63), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 18/134 (13%)

Query: 99  TPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEK----NPNTEKNSPA-GLVGLERRF 153
           T   ++V +D ++     W      TL+ L+   EK    + + ++NSP     G +R++
Sbjct: 74  TKNSKWVEVDTWESLQKEWKE----TLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKW 129

Query: 154 LMFNGAVGKEQIKWLDAVLQDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHR 213
                +  K+        L+  TK   KV + C   L    A P   LW   ++  ++  
Sbjct: 130 TETQDSSQKKS-------LEPKTKAVPKVKLLCGADLLESFAVPN--LWKSEDITQIVAN 180

Query: 214 YNCVKVCLAGHDHQ 227
           Y  + V  AG+D Q
Sbjct: 181 YGLICVTRAGNDAQ 194


>pdb|1GZU|A Chain A, Crystal Structure Of Human Nicotinamide Mononucleotide
           Adenylyltransferase In Complex With Nmn
 pdb|1GZU|B Chain B, Crystal Structure Of Human Nicotinamide Mononucleotide
           Adenylyltransferase In Complex With Nmn
 pdb|1GZU|C Chain C, Crystal Structure Of Human Nicotinamide Mononucleotide
           Adenylyltransferase In Complex With Nmn
          Length = 290

 Score = 28.9 bits (63), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 18/134 (13%)

Query: 99  TPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEK----NPNTEKNSPA-GLVGLERRF 153
           T   ++V +D ++     W      TL+ L+   EK    + + ++NSP     G +R++
Sbjct: 85  TKNSKWVEVDTWESLQKEWKE----TLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKW 140

Query: 154 LMFNGAVGKEQIKWLDAVLQDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHR 213
                +  K+        L+  TK   KV + C   L    A P   LW   ++  ++  
Sbjct: 141 TETQDSSQKKS-------LEPKTKAVPKVKLLCGADLLESFAVPN--LWKSEDITQIVAN 191

Query: 214 YNCVKVCLAGHDHQ 227
           Y  + V  AG+D Q
Sbjct: 192 YGLICVTRAGNDAQ 205


>pdb|3K9I|A Chain A, Crystal Structure Of Putative Protein Binding Protein
          (np_241345.1) From Bacillus Halodurans At 2.71 A
          Resolution
          Length = 117

 Score = 28.9 bits (63), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 5  YRHSLLVLQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNE 54
          YR +  VL N V+++ NHQ L+  + +  ++      +Q +E + K++ E
Sbjct: 43 YRKAEAVLANGVKQFPNHQALR--VFYAXVLYNLGRYEQGVELLLKIIAE 90


>pdb|1KQN|A Chain A, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Nad
 pdb|1KQN|B Chain B, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Nad
 pdb|1KQN|C Chain C, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Nad
 pdb|1KQN|D Chain D, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Nad
 pdb|1KQN|E Chain E, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Nad
 pdb|1KQN|F Chain F, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Nad
 pdb|1KQO|A Chain A, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Deamido-Nad
 pdb|1KQO|B Chain B, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Deamido-Nad
 pdb|1KQO|C Chain C, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Deamido-Nad
 pdb|1KQO|D Chain D, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Deamido-Nad
 pdb|1KQO|E Chain E, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Deamido-Nad
 pdb|1KQO|F Chain F, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
           With Deamido-Nad
 pdb|1KR2|A Chain A, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
           Complexed With Tiazofurin Adenine Dinucleotide (Tad)
 pdb|1KR2|B Chain B, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
           Complexed With Tiazofurin Adenine Dinucleotide (Tad)
 pdb|1KR2|C Chain C, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
           Complexed With Tiazofurin Adenine Dinucleotide (Tad)
 pdb|1KR2|D Chain D, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
           Complexed With Tiazofurin Adenine Dinucleotide (Tad)
 pdb|1KR2|E Chain E, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
           Complexed With Tiazofurin Adenine Dinucleotide (Tad)
 pdb|1KR2|F Chain F, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
           Complexed With Tiazofurin Adenine Dinucleotide (Tad)
          Length = 279

 Score = 28.9 bits (63), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 18/134 (13%)

Query: 99  TPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEK----NPNTEKNSPA-GLVGLERRF 153
           T   ++V +D ++     W      TL+ L+   EK    + + ++NSP     G +R++
Sbjct: 74  TKNSKWVEVDTWESLQKEWKE----TLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKW 129

Query: 154 LMFNGAVGKEQIKWLDAVLQDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHR 213
                +  K+        L+  TK   KV + C   L    A P   LW   ++  ++  
Sbjct: 130 TETQDSSQKKS-------LEPKTKAVPKVKLLCGADLLESFAVPN--LWKSEDITQIVAN 180

Query: 214 YNCVKVCLAGHDHQ 227
           Y  + V  AG+D Q
Sbjct: 181 YGLICVTRAGNDAQ 194


>pdb|3PXI|AA Chain a, Structure Of Meca108:clpc
 pdb|3PXI|BB Chain b, Structure Of Meca108:clpc
 pdb|3PXI|CC Chain c, Structure Of Meca108:clpc
          Length = 111

 Score = 28.1 bits (61), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 13 QNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNEFE 56
          + AV +    QKL+FV+ FGD  D       ++   K  +  FE
Sbjct: 8  EQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFE 51


>pdb|2GNX|A Chain A, X-Ray Structure Of A Hypothetical Protein From Mouse
           Mm.209172
          Length = 344

 Score = 27.7 bits (60), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 206 EVMDVIHRYNCVKVCLAGHDHQGGHSIDTHGIHHRVLEAALECPPGTDAF 255
           ++   I +Y+   V L   D++G  S   HG HH    +  E P G D +
Sbjct: 199 KISSFIRKYDAANVSLI-FDNRGSESFQGHGYHHP--HSYREAPKGVDQY 245


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.140    0.456 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,727,997
Number of Sequences: 62578
Number of extensions: 432690
Number of successful extensions: 937
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 930
Number of HSP's gapped (non-prelim): 19
length of query: 282
length of database: 14,973,337
effective HSP length: 98
effective length of query: 184
effective length of database: 8,840,693
effective search space: 1626687512
effective search space used: 1626687512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)