BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023422
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H5F8|ADPRM_ORYSJ Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Oryza
sativa subsp. japonica GN=Os07g0688000 PE=2 SV=1
Length = 321
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 185/279 (66%), Positives = 227/279 (81%)
Query: 4 YYRHSLLVLQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNEFEKFNGPAY 63
YYRHS+ VLQ AV WN +KF I+FGDI+DG+CPKD+SL AV+KV++EFEKF+GP Y
Sbjct: 43 YYRHSISVLQRAVSTWNKQHNIKFSINFGDIIDGYCPKDKSLWAVQKVLDEFEKFDGPTY 102
Query: 64 HMIGNHCLYNLPRHMLLPLLKISSVDGRAYYDFSPTPEYRFVVLDGYDISAIGWPHNHPN 123
HM GNHCLYNLPR L+ LLK+ + RAYYDFSP PEYRFVVLD YD SA+GWP +HP
Sbjct: 103 HMFGNHCLYNLPRGKLVSLLKMPTDSDRAYYDFSPCPEYRFVVLDAYDFSALGWPRDHPV 162
Query: 124 TLEALKFLGEKNPNTEKNSPAGLVGLERRFLMFNGAVGKEQIKWLDAVLQDATKLNQKVV 183
T EA+KFL EKNPN++KNSP GLVG++RRF+MFNG VGKEQ+ WL+ VLQDA+ Q V+
Sbjct: 163 TAEAMKFLEEKNPNSDKNSPDGLVGVDRRFVMFNGGVGKEQLSWLNDVLQDASARRQNVI 222
Query: 184 VCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLAGHDHQGGHSIDTHGIHHRVLE 243
+C H+P+DPGSAS AL+WN +EVM ++ +Y CVK C AGHDH+GGHS+D+HG+HHR LE
Sbjct: 223 LCSHLPMDPGSASFAALMWNYDEVMAIVRQYKCVKACFAGHDHKGGHSVDSHGVHHRTLE 282
Query: 244 AALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDMCFTP 282
AALECPPGT AFGHI+ Y D+L LVG+ +M T+MCF P
Sbjct: 283 AALECPPGTSAFGHIEVYPDKLLLVGSDKMADTEMCFEP 321
>sp|Q9SB68|ADPRM_ARATH Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
OS=Arabidopsis thaliana GN=At4g24730 PE=2 SV=1
Length = 311
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 234/275 (85%)
Query: 4 YYRHSLLVLQNAVQRWNNHQKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNEFEKFNGPAY 63
YYR+S+LVLQ AV+ WN H LKFVI+ GDIVDGFCPKDQSL A KK+V+EFEKFNGP Y
Sbjct: 35 YYRNSILVLQRAVETWNQHGNLKFVINMGDIVDGFCPKDQSLAATKKLVHEFEKFNGPVY 94
Query: 64 HMIGNHCLYNLPRHMLLPLLKISSVDGRAYYDFSPTPEYRFVVLDGYDISAIGWPHNHPN 123
HMIGNHCLYNLPR LLPLLKI DG AYYDFSPTPEYR VVLDGYDISA+GWP HPN
Sbjct: 95 HMIGNHCLYNLPREELLPLLKIPGRDGNAYYDFSPTPEYRVVVLDGYDISAVGWPQEHPN 154
Query: 124 TLEALKFLGEKNPNTEKNSPAGLVGLERRFLMFNGAVGKEQIKWLDAVLQDATKLNQKVV 183
T+ ALK L EKNPNT+KNSPAGL + RRF+ +NG VG++Q++WLD+VLQDA+ NQ+V+
Sbjct: 155 TIAALKILEEKNPNTDKNSPAGLEDVARRFVKYNGGVGEKQLQWLDSVLQDASNSNQRVI 214
Query: 184 VCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLAGHDHQGGHSIDTHGIHHRVLE 243
VC HVP+ PG AS ALLWN +EVM++IH+Y+ VKVCL+GHDH+GG+ +D+HG+HHR LE
Sbjct: 215 VCGHVPMSPGVASKAALLWNFDEVMNIIHKYDSVKVCLSGHDHKGGYFVDSHGVHHRSLE 274
Query: 244 AALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDM 278
AALECPPGT +FG+ID YD++LSLVGT RMQSTD
Sbjct: 275 AALECPPGTYSFGYIDVYDNKLSLVGTDRMQSTDF 309
>sp|A7YY53|ADPRM_BOVIN Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Bos
taurus GN=ADPRM PE=2 SV=2
Length = 337
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 163/287 (56%), Gaps = 20/287 (6%)
Query: 4 YYRHSLLVLQNAVQRWNNHQKL-KFVIHFGDIVDGFCPKDQSLE-AVKKVVNEFEKFNGP 61
YYRHSLL LQ A++ WN + + V+ GDI+DG+ + ++ E ++++V+N F+ P
Sbjct: 44 YYRHSLLHLQGAIEHWNQERSPPRCVLQLGDIIDGYNAQYKASEKSLERVMNTFQMLRVP 103
Query: 62 AYHMIGNHCLYNLPRHMLL------PLLK---------ISSVDGRAYYDFSPTPEYRFVV 106
+H GNH YN R L L+ + S D AY+ F P P++RF++
Sbjct: 104 VHHTWGNHEFYNFSRDYLTNSKLNTKFLEDQIAHHPETVPSEDYYAYH-FVPFPKFRFIL 162
Query: 107 LDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGLVGLERRFLMFNGAVGKEQIK 166
LD YD+S +G + P + LK L E NPNTE NSP GL E +F+ FNG EQ+
Sbjct: 163 LDAYDMSVLGVDQSSPKYQQCLKILREHNPNTELNSPQGL--REPQFVQFNGGFSPEQLN 220
Query: 167 WLDAVLQDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLAGHDH 226
WL+AVL + + +KVV+ H+P+ P ++ L WN + + VI + CV AGH H
Sbjct: 221 WLNAVLTFSDRNQEKVVIVSHLPIYPEASDSVCLAWNYRDALAVIWSHKCVVCFFAGHTH 280
Query: 227 QGGHSIDTHGIHHRVLEAALECPPGTDAFGHIDAYDDRLSLVGTGRM 273
GG+S D +G+HH +E +E P + AFG + Y D++ L G GR+
Sbjct: 281 DGGYSEDPYGVHHVNIEGVIETAPDSQAFGTVHVYPDKMMLEGRGRV 327
>sp|Q3LIE5|ADPRM_HUMAN Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Homo
sapiens GN=ADPRM PE=2 SV=1
Length = 342
Score = 194 bits (493), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 163/294 (55%), Gaps = 20/294 (6%)
Query: 4 YYRHSLLVLQNAVQRWNNHQKLKF-VIHFGDIVDGFCPK-DQSLEAVKKVVNEFEKFNGP 61
YYRHSLL LQ A++ WNN + V+ GDI+DG+ + + S ++++ V++ F++ P
Sbjct: 44 YYRHSLLHLQGAIEDWNNESSMPCCVLQLGDIIDGYNAQYNASKKSLELVMDMFKRLKVP 103
Query: 62 AYHMIGNHCLYNLPRHMLL------PLLK---------ISSVDGRAYYDFSPTPEYRFVV 106
+H GNH YN R L L+ + S D AY+ F P P++RF++
Sbjct: 104 VHHTWGNHEFYNFSREYLTHSKLNTKFLEDQIVHHPETMPSEDYYAYH-FVPFPKFRFIL 162
Query: 107 LDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGLVGLERRFLMFNGAVGKEQIK 166
LD YD+S +G + P + +K L E NPNTE NSP GL E +F+ FNG +EQ+
Sbjct: 163 LDAYDLSVLGVDQSSPKYEQCMKILREHNPNTELNSPQGLS--EPQFVQFNGGFSQEQLN 220
Query: 167 WLDAVLQDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLAGHDH 226
WL+ VL + +KVV+ H+P+ P ++ L WN + + VI + CV AGH H
Sbjct: 221 WLNEVLTFSDTNQEKVVIVSHLPIYPDASDNVCLAWNYRDALAVIWSHECVVCFFAGHTH 280
Query: 227 QGGHSIDTHGIHHRVLEAALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDMCF 280
GG+S D G++H LE +E P + AFG + Y D++ L G GR+ M +
Sbjct: 281 DGGYSEDPFGVYHVNLEGVIETAPDSQAFGTVHVYPDKMMLKGRGRVPDRIMNY 334
>sp|Q66JJ3|ADPRM_XENTR Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Xenopus
tropicalis GN=adprm PE=2 SV=1
Length = 342
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 161/298 (54%), Gaps = 23/298 (7%)
Query: 4 YYRHSLLVLQNAVQRWNNHQ-KLKFVIHFGDIVDGFCPKDQSLE-AVKKVVNEFEKFNGP 61
YYR+SL L+ AV+ W K F++ GDI+DG KD+S + A+++V+ E +K
Sbjct: 37 YYRNSLTQLKAAVEEWAMESIKPAFILQLGDIIDGINTKDKSSKTALERVLVEMDKLPIQ 96
Query: 62 AYHMIGNHCLYNLPRHMLLPLLKISSVDGRAY-------------------YDFSPTPEY 102
+H+ GNH YN R L S G Y FSP P++
Sbjct: 97 FHHVWGNHEFYNFSREYLNGSKLNSQARGDRIDRGGGTSENGEFNDESFYAYHFSPCPKF 156
Query: 103 RFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGLVGLERRFLMFNGAVGK 162
RF+++DGYD+S IG P AL L EKNPN + NSP GL E +F++FNG +
Sbjct: 157 RFLLIDGYDLSPIGREKTSPKYDIALNLLKEKNPNEDLNSPTGLE--EVQFVLFNGGISP 214
Query: 163 EQIKWLDAVLQDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLA 222
Q+ W++ VL + + + V V H+P+ P +A P L+WN EV+ V+ + CV LA
Sbjct: 215 SQLDWMERVLTSSDEKEENVFVVSHLPVHPDAADPMCLVWNYPEVLSVLQSHPCVVGYLA 274
Query: 223 GHDHQGGHSIDTHGIHHRVLEAALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDMCF 280
GH+H+G + +D +GIHH +E PP + AFG + Y+D++ L G G ++ + +
Sbjct: 275 GHNHEGRYCMDPYGIHHLTFSGVIETPPESRAFGTMYVYEDKMVLKGRGLVEDRTLYY 332
>sp|Q7T0Q0|ADPRM_XENLA Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Xenopus
laevis GN=adprm PE=2 SV=1
Length = 356
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 160/302 (52%), Gaps = 31/302 (10%)
Query: 4 YYRHSLLVLQNAVQRWNNHQ-KLKFVIHFGDIVDGFCPKDQSLE-AVKKVVNEFEKFNGP 61
YYR+SL L+ A++ W K KF++ GDI+DG KD S A+++V+ E +K
Sbjct: 51 YYRNSLTQLKVAIKEWATESIKPKFILQLGDIIDGVNTKDNSSTIALERVLEEMDKLPIQ 110
Query: 62 AYHMIGNHCLYNLPRHMLLPLLKISSVDGRAY-----------------------YDFSP 98
+H+ GNH YN R L S ++ RA Y FSP
Sbjct: 111 FHHVWGNHEFYNFSRE----YLNGSKLNSRARENRIDQQVGTSESGETNDESFYAYHFSP 166
Query: 99 TPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGLVGLERRFLMFNG 158
P++RF+++DGYD+S IG + L EKNPN + NSP GL E +F++FNG
Sbjct: 167 FPKFRFLLIDGYDLSPIGREKTSLKYDISFNLLKEKNPNEDLNSPTGLE--EEQFVLFNG 224
Query: 159 AVGKEQIKWLDAVLQDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVK 218
+ Q+ W+ ++L + K +KV V H+P+ P +A L+WN EV+ ++ + CV
Sbjct: 225 GISPSQLDWIQSILTSSDKKEEKVFVVSHLPVHPDAADTMCLIWNYPEVLSMLQSHPCVV 284
Query: 219 VCLAGHDHQGGHSIDTHGIHHRVLEAALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDM 278
LAGH+H+G + +D GIHH +E PP + AFG + Y+D++ L G G ++ +
Sbjct: 285 GYLAGHNHEGRYCMDPSGIHHMTFSGVIETPPESQAFGTMYVYEDKMVLKGRGLVEDRTL 344
Query: 279 CF 280
+
Sbjct: 345 HY 346
>sp|Q99KS6|ADPRM_MOUSE Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Mus
musculus GN=Adprm PE=2 SV=1
Length = 340
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 154/290 (53%), Gaps = 18/290 (6%)
Query: 7 HSLLVLQNAVQRWNNHQKLKF-VIHFGDIVDGFCPKDQ-SLEAVKKVVNEFEKFNGPAYH 64
HSL+ LQ A++ WN + V+ GDI+DG+ + + S ++++ V+N F+ P +H
Sbjct: 47 HSLIHLQGAIEDWNKESSMPCCVLQLGDIIDGYNAQYKVSEKSLELVMNTFQMLKVPVHH 106
Query: 65 MIGNHCLYNLPRHMLLPLL--------------KISSVDGRAYYDFSPTPEYRFVVLDGY 110
GNH YN R L + + + Y F P P++RF++LD Y
Sbjct: 107 TWGNHEFYNFSRDYLASSKLNSKFLEDQIAQHPETTPSENYYAYHFVPFPKFRFILLDSY 166
Query: 111 DISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGLVGLERRFLMFNGAVGKEQIKWLDA 170
D+S +G + P + +K L E NPN E NSP GL E +++ FNG +EQ+ WL+
Sbjct: 167 DLSVLGIDPSSPKYEQCMKMLREHNPNVELNSPQGLS--EPQYVQFNGGFSQEQLNWLNE 224
Query: 171 VLQDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLAGHDHQGGH 230
VL + +KVV+ H+P+ P ++ L WN + + +I + CV LAGH H GG+
Sbjct: 225 VLTFSDTNQEKVVIVSHLPIYPEASDSVCLAWNYVDALSIIWSHKCVVCFLAGHTHDGGY 284
Query: 231 SIDTHGIHHRVLEAALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDMCF 280
S D G+HH LE +E P + AFG + + D++ L G GR+ M +
Sbjct: 285 SEDPFGVHHVNLEGVIETAPDSQAFGTVHVFPDKMLLKGRGRVPDRIMNY 334
>sp|Q5M886|ADPRM_RAT Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Rattus
norvegicus GN=Adprm PE=1 SV=1
Length = 337
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 153/288 (53%), Gaps = 18/288 (6%)
Query: 9 LLVLQNAVQRWNNHQKLKF-VIHFGDIVDGFCPKDQ-SLEAVKKVVNEFEKFNGPAYHMI 66
L+ LQ A++ WN + V+ GDI+DG+ + + S ++++ V+N F+ P +H
Sbjct: 49 LVHLQGAIEDWNKESSMPCCVLQLGDIIDGYNAQYKVSEKSLELVMNTFQMLKVPVHHTW 108
Query: 67 GNHCLYNLPRHML-------------LPLLKISSVDGRAY-YDFSPTPEYRFVVLDGYDI 112
GNH YN R L +P ++ Y Y F P P++RF++LD YD+
Sbjct: 109 GNHEFYNFSRDYLANSKLNSKFLEDQIPQHPETTPSENYYAYHFVPFPKFRFILLDSYDL 168
Query: 113 SAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGLVGLERRFLMFNGAVGKEQIKWLDAVL 172
S +G P + +K L E NPN E NSP GL E +++ FNG +EQ+ WL+ VL
Sbjct: 169 SVLGIDQFSPKYEQCMKILREHNPNVELNSPQGLS--EPQYVQFNGGFSQEQLNWLNEVL 226
Query: 173 QDATKLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLAGHDHQGGHSI 232
+ +KVV+ H+P+ P ++ L WN + + +I + CV LAGH H GG+S
Sbjct: 227 TFSDANQEKVVIVSHLPIYPEASDSVCLAWNYVDALSIIWSHQCVVCFLAGHTHDGGYSE 286
Query: 233 DTHGIHHRVLEAALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDMCF 280
D G+HH LE +E P + AFG + Y D++ L G GR+ M +
Sbjct: 287 DPFGVHHVNLEGVIETAPDSQAFGTVHVYPDKMLLKGRGRVPDRIMNY 334
>sp|Q7T291|ADPRM_DANRE Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Danio
rerio GN=adprm PE=1 SV=1
Length = 322
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 152/285 (53%), Gaps = 15/285 (5%)
Query: 11 VLQNAVQRWNNHQKLKFVIHFGDIVDGFCPK-DQSLEAVKKVVNEFEKFNGPAYHMIGNH 69
+L++AV +W ++++ V+ GDI+DG + D S A+ V+ E + + +H+ GNH
Sbjct: 39 LLRDAVLQWRR-ERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNH 97
Query: 70 CLYNLPRHMLLPLLKISSV------------DGRAYYDFSPTPEYRFVVLDGYDISAIGW 117
YN R LL S+ D Y+FSP P +RFV+LD YD+S IG
Sbjct: 98 EFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGR 157
Query: 118 PHNHPNTLEALKFLGEKNPNTEK-NSPAGLVGLERRFLMFNGAVGKEQIKWLDAVLQDAT 176
+ + L + N N + N P VGLE+RF+ FNG ++Q++WLDAVL +
Sbjct: 158 EEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSD 217
Query: 177 KLNQKVVVCCHVPLDPGSASPEALLWNCNEVMDVIHRYNCVKVCLAGHDHQGGHSIDTHG 236
++V++ H+P+ P +A P L WN V+ V+ + V +AGHDH GG D+ G
Sbjct: 218 HKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSG 277
Query: 237 IHHRVLEAALECPPGTDAFGHIDAYDDRLSLVGTGRMQSTDMCFT 281
H LE +E PP + AF Y+DR+ + G GR++ + ++
Sbjct: 278 AQHITLEGVIETPPHSHAFATAYLYEDRMVMKGRGRVEDLTITYS 322
>sp|A5GLK1|CPDA_SYNPW 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
OS=Synechococcus sp. (strain WH7803) GN=cpdA PE=3 SV=1
Length = 265
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 119 HNHPNTLEALKFLGEKNPNTEKNSPAG----LVGLERRFLMFNGAVGKEQIKWLDAVLQD 174
H+HP L A+ LG AG LV R G +G Q+ WL+ L++
Sbjct: 87 HDHPQRLRAV--LGRHWVVAPGVMDAGCWRLLVVSSHRAGGCAGVIGGVQLSWLNTQLRE 144
Query: 175 ATKLNQKVVVCCHVPLDP-GSASPEAL-LWNCNEVMDVIHRYNCVKVCLAGHDHQ 227
A L + VVV H P P G AS + + L + ++MD + R+ V+V L GH HQ
Sbjct: 145 AETLGKFVVVALHHPPVPIGDASMDTIGLSDGEQLMDSLKRWPAVRVVLFGHIHQ 199
>sp|Q8YLG0|CPDA_NOSS1 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=cpdA PE=1
SV=1
Length = 266
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 158 GAVGKEQIKWLDAVLQDATKLNQKVVVCCHVPLDPGSA-SPEALLWNCNEVMDVIHRYNC 216
G + + WLD+ L+ N ++ H PL SA + L N E+ VI RY
Sbjct: 128 GYLSATTLDWLDSELKMLPN-NPTLIALHHPPLSVNSAWIDRSCLQNSQELFAVIDRYPQ 186
Query: 217 VKVCLAGHDHQGGHSIDTHGIHH 239
VK+ L GH HQ H +H+
Sbjct: 187 VKLVLFGHIHQEFRR-QRHNVHY 208
>sp|Q92484|ASM3A_HUMAN Acid sphingomyelinase-like phosphodiesterase 3a OS=Homo sapiens
GN=SMPDL3A PE=1 SV=2
Length = 453
Score = 34.3 bits (77), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Query: 79 LLPLLKISSVDGRAYYDFSPTPEYRFVVLDGYDISAIGWP----HNHPNTLEALKFLGEK 134
L P L++ G +D+ P + V Y+ A W +TL F +K
Sbjct: 139 LFPNLQVFPALGN--HDYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQK 196
Query: 135 ---NPNTEKNSPAGLVGLERRFLMFNGAVGKEQIKWLDAVLQDATKLNQKVVVCCHVPLD 191
NPN S + + N Q +WL++ L ++ + +KV + HVP+
Sbjct: 197 VTTNPNLRIISLNTNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVG 256
Query: 192 --PGSASPEALLWNCNE-VMDVIHRY-NCVKVCLAGHDHQ 227
P S + A+ NE ++D+ +Y + + GH H+
Sbjct: 257 YLPSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHR 296
>sp|Q97C75|MRE11_THEVO DNA double-strand break repair protein Mre11 OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=mre11 PE=3 SV=1
Length = 374
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 28/47 (59%)
Query: 23 QKLKFVIHFGDIVDGFCPKDQSLEAVKKVVNEFEKFNGPAYHMIGNH 69
+K+ F+IH GD+ D + P ++S++ + + + P +++ G+H
Sbjct: 40 EKVDFIIHSGDLFDTWIPGNRSMKVFRDAMMKLNDRQIPVFYVFGDH 86
>sp|Q641Z7|ASM3A_RAT Acid sphingomyelinase-like phosphodiesterase 3a OS=Rattus
norvegicus GN=Smpdl3a PE=2 SV=1
Length = 445
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 153 FLMFNGAVGKEQIKWLDAVLQDATKLNQKVVVCCHVP---LDPGSASPEALLWNCNEVMD 209
+ N Q +WL+ L + + +KV V HVP L + +P + +++D
Sbjct: 215 IMTLNKTDPANQFEWLENTLNSSLRNKEKVYVIAHVPVGYLPYATKTPAMRQYYNEKLVD 274
Query: 210 VIHRYNCVKVC-LAGHDHQ 227
+ RY+ V GH H+
Sbjct: 275 IFRRYSSVIAGQFYGHTHR 293
>sp|P05675|CPDA_SYNP6 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=cpdA PE=3 SV=2
Length = 255
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 114 AIGWPHNHPNTLEAL----KFLGEKNPNTEKNSPAGLVGLERRFLMFNGAVGKEQIKWLD 169
AI H+ P L + F+GE + + L + + + +G + +Q+ WLD
Sbjct: 85 AIAGNHDQPERLTEICGRSPFMGEPVYSIQGWRIIALDSYQPKRI--DGRLRGDQLDWLD 142
Query: 170 AVLQDATKLNQKVVVCCHVPLDPGSASPEAL-LWNCNEVMDVIHRYNCVKVCLAGHDHQG 228
L + + + +++ H P+ G +A+ L + E ++VI + V++ L+GH HQ
Sbjct: 143 QRLGEDS--SPTLLMLHHPPVLIGVTKMDAIGLKDGPEFLEVIAHHQQVRLVLSGHAHQA 200
Query: 229 GHSIDTHGIHHRVLEAALECP 249
I R L L CP
Sbjct: 201 -------FIQGRGLTTFLGCP 214
>sp|Q9HLR7|MRE11_THEAC DNA double-strand break repair protein Mre11 OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=mre11 PE=3 SV=1
Length = 376
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 25 LKFVIHFGDIVDGFCPKDQSLEAVKKVVNEFEKFNGPAYHMIGNH 69
+ FVIH GD+ D + P ++++ + V + N P + + G+H
Sbjct: 38 VDFVIHTGDLFDTWVPGNRAIREFRNAVMKLNARNIPIFVIFGDH 82
>sp|O58307|ALAXS_PYRHO Alanyl-tRNA editing protein AlaX-S OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=alaXS PE=1 SV=1
Length = 157
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 40 PKDQSLEAVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLLKISSVDGRAYYDFSPT 99
P D+ + ++++ NE K N P +Y LPR + G YD P
Sbjct: 50 PSDEEIREIERLANEKVKENAPIK-------IYELPREEAEKMF------GEDMYDLFPV 96
Query: 100 PE----YRFVVLDGYDISAIGWPHN 120
PE + VV++ ++++A H
Sbjct: 97 PEDVRILKVVVIEDWNVNACNKEHT 121
>sp|P70158|ASM3A_MOUSE Acid sphingomyelinase-like phosphodiesterase 3a OS=Mus musculus
GN=Smpdl3a PE=2 SV=2
Length = 445
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 13/160 (8%)
Query: 79 LLPLLKISSVDGRAYYDFSPTPEYRFVVLDGYDISAIGW-PHNHPNTLEALKFLGEKNPN 137
L P L++ G +D+ P + V Y A W P + LK G +
Sbjct: 136 LFPNLQVFPALGN--HDYWPQDQLPIVTSKVYSAVADLWKPWLGEEAISTLKKGGFYSQK 193
Query: 138 TEKNSPAGLVGLERRF------LMFNGAVGKEQIKWLDAVLQDATKLNQKVVVCCHVP-- 189
N ++ L + N Q +WL+ L + +KV + HVP
Sbjct: 194 VASNPGLRIISLNTNLYYGPNIMTLNKTDPANQFEWLENTLNSSLWNKEKVYIIAHVPVG 253
Query: 190 -LDPGSASPEALLWNCNEVMDVIHRYNCVKVC-LAGHDHQ 227
L + +P + +++D+ RY+ V GH H+
Sbjct: 254 YLPYATDTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHR 293
>sp|Q5R5N8|DI3L1_PONAB DIS3-like exonuclease 1 OS=Pongo abelii GN=DIS3L PE=2 SV=1
Length = 1054
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 27/105 (25%)
Query: 3 WYYRHS------LLVLQN--AVQRWNNHQKLKFVIHFGDIVDGFCPK--------DQSLE 46
WYY H ++V ++ A+Q++ + + FVI F + +D F P D L+
Sbjct: 149 WYYHHCQDRMPIVMVTEDEEAIQQYGSETEGVFVISFKNYLDNFWPDLKAAHELCDSILQ 208
Query: 47 AVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLLKISSVDGR 91
+ ++ NE ++ +G Y P H+ L +L+ GR
Sbjct: 209 SRRERENESQESHGKEY-----------PEHLPLEVLEAGIKSGR 242
>sp|E1C3S7|TDRD7_CHICK Tudor domain-containing protein 7 OS=Gallus gallus GN=TDRD7 PE=2
SV=1
Length = 1071
Score = 31.2 bits (69), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 172 LQDATKLNQKVVVCC--HVPLDPGSASPEALLWNCNEVMD 209
L++ K+ + + CC +P D G +PEA+LW + VMD
Sbjct: 744 LREVIKIPPQAIKCCLADLPPDTGMWTPEAVLWLRDNVMD 783
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,410,100
Number of Sequences: 539616
Number of extensions: 5268853
Number of successful extensions: 10357
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 10318
Number of HSP's gapped (non-prelim): 31
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)