BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023424
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXX5|PPD6_ARATH PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis
thaliana GN=PPD6 PE=1 SV=1
Length = 262
Score = 352 bits (902), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/214 (78%), Positives = 187/214 (87%), Gaps = 2/214 (0%)
Query: 67 RREIL-KGLAVIPVTLIINKEPPYSEAREVEVGSYLPPSPTDPSFVFFKASPKDTPALRA 125
RRE+L K IP L + KE P S AREVEVGSYLP SP+DPSFV FKA P DTPALRA
Sbjct: 42 RRELLLKSAVAIPAILQL-KEAPISAAREVEVGSYLPLSPSDPSFVLFKAKPSDTPALRA 100
Query: 126 GNVQPYQFVLPPSWKQMRVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLT 185
GNVQPYQFVLPP+WKQ+R+ANILSGNYCQPKCAEPW+EVKFE+EKQGKVQVVASPLIRLT
Sbjct: 101 GNVQPYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLT 160
Query: 186 NKPNASIEEIGSPEKVIASLGPFVTGNSYDPDELIETSVEKVGDQMYYNYLLETPFALTG 245
NKPNA+IE++G PEKVIASLGPFVTGNSYD DEL++TS+EK+GDQ YY Y+LETPFALTG
Sbjct: 161 NKPNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTG 220
Query: 246 THNLAKATAKGSTVVLFVASANDKQWAGVTESFE 279
+HNLAKATAKGSTVVLFV SA +KQW ++ E
Sbjct: 221 SHNLAKATAKGSTVVLFVVSATEKQWQSSQKTLE 254
>sp|O49292|PPD4_ARATH PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis
thaliana GN=PPD4 PE=1 SV=2
Length = 260
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 72 KGLAVIPVTLIINKEPPYSEAREVEVGSYLPPSPTDPSFVFFKASPKDTPALRAGNVQPY 131
+GLAV+ L+ + P SE E +Y P SP + PY
Sbjct: 68 EGLAVVKQGLLAGRVPGLSEPDEEGWRTYRRPDEKSGGH-GVGWSP----------IIPY 116
Query: 132 QFVLPPSWKQMRVANI-LSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNK--P 188
F +P W ++ V+ L G ++++F K+G++ V+ +P++R +
Sbjct: 117 AFSVPQDWNEVPVSIADLGGTE---------IDLRFASPKEGRLSVIVAPVLRFADNLGD 167
Query: 189 NASIEEIGSPEKVIASLGPFVTGNSYDPDELIETSVEKVGDQMYYNYLLETPFALTGTHN 248
+ IE IG P KVI + GP V G + + +++ ++V + ++YY + LE P H
Sbjct: 168 DVKIENIGQPAKVINAFGPEVIGENVE-GKVLSSNVAEHDGRLYYQFELEPP------HV 220
Query: 249 LAKATAKGSTVVLFVASANDKQW 271
L ATA G+ + LF + N QW
Sbjct: 221 LITATAAGNRLYLFSVTGNGLQW 243
>sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chloroplastic (Fragment)
OS=Brassica juncea GN=PSBP PE=2 SV=1
Length = 217
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 45/193 (23%)
Query: 104 SPTDPSF-----VFFKASPKDTPALRAGNVQPYQFVLPPSWKQMRVANILSGNYCQPKCA 158
SP D ++ VF K PK A N +Q +P W R +
Sbjct: 27 SPADAAYGEAANVFGK--PKTNTDFTAINGDGFQVQVPAKWNPSR------------EVE 72
Query: 159 EPWVEVKFED--EKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVI----------ASLG 206
P +++ED + + V+ +P T+K SI + GSPE+ + A G
Sbjct: 73 YPGQVLRYEDNFDATSNLNVMVTP----TDKK--SITDYGSPEEFLSQVNYLLGKQAYFG 126
Query: 207 PFVTGNSYDPD-----ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKATAKGST 258
+D + ++ET+++ VG + YY + T A G H L AT G
Sbjct: 127 ETACEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVNGGK 186
Query: 259 VVLFVASANDKQW 271
+ + A A DK+W
Sbjct: 187 LYICKAQAGDKRW 199
>sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana
tabacum GN=PSBP3 PE=2 SV=1
Length = 266
Score = 39.3 bits (90), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 44/210 (20%)
Query: 97 VGSYLPPSPTDPSF-----VFFKASPKDTPALRAGNVQPYQFVLPPSWKQMRVANILSGN 151
VGS + SP D ++ VF K PK + N ++ +P W +
Sbjct: 71 VGSKV--SPADAAYGEAANVFGK--PKTDTDFQTYNGDGFKLQIPSKWNPNK-------- 118
Query: 152 YCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVIASLGPFVTG 211
+ P ++FED ++ ++ +T SI + GSPE+ ++ + +
Sbjct: 119 ----EVEYPGQVLRFEDN----FDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGR 170
Query: 212 NSYDPD---------------ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKAT 253
+Y ++ETS +VG + YY + T A G H L AT
Sbjct: 171 QAYSGKTDSEGGFESDAVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTAT 230
Query: 254 AKGSTVVLFVASANDKQW-AGVTESFENHA 282
+ + A A DK+W G + EN A
Sbjct: 231 VNDGKLYICKAQAGDKRWFKGAKKFVENTA 260
>sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba
GN=PSBP PE=2 SV=2
Length = 260
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 45/193 (23%)
Query: 104 SPTDPSF-----VFFKASPKDTPALRAGNVQPYQFVLPPSWKQMRVANILSGNYCQPKCA 158
SP D ++ VF K PK A + +Q +P W R +
Sbjct: 70 SPADAAYGEAANVFGK--PKKNTDFTAYSGDGFQVQVPAKWNPSR------------EVE 115
Query: 159 EPWVEVKFED--EKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVI----------ASLG 206
P +++ED + + V+ +P T+K SI + GSPE+ + A G
Sbjct: 116 YPGQVLRYEDNFDATSNLNVMVTP----TDKK--SITDYGSPEEFLSQVNYLLGKQAYFG 169
Query: 207 PFVTGNSYDPD-----ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKATAKGST 258
+ +D + ++ET+++ VG + YY + T A G H L AT G
Sbjct: 170 ETASEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGK 229
Query: 259 VVLFVASANDKQW 271
+ + A A DK+W
Sbjct: 230 LYICKAQAGDKRW 242
>sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum
GN=PSBP PE=1 SV=1
Length = 259
Score = 38.5 bits (88), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 24/131 (18%)
Query: 160 PWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVIA---------------- 203
P +++ED V S L++ T+K SI + GSPE+ ++
Sbjct: 116 PGQVLRYEDNFDATSNV--SVLVQTTDKK--SITDYGSPEEFLSKVDYLLGKQAFFGQTD 171
Query: 204 SLGPFVTGNSYDPDELIETSVEKVGDQMYYNYLLETPFALT---GTHNLAKATAKGSTVV 260
S G F T N+ ++E+S +G + YYN + T A G H L AT K +
Sbjct: 172 SEGGFDT-NAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLY 230
Query: 261 LFVASANDKQW 271
+ A A DK+W
Sbjct: 231 ICKAQAGDKRW 241
>sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana
tabacum GN=PSBP1 PE=3 SV=2
Length = 268
Score = 38.1 bits (87), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 78/204 (38%), Gaps = 44/204 (21%)
Query: 104 SPTDPSF-----VFFKASPKDTPALRAGNVQPYQFVLPPSWKQMRVANILSGNYCQPKCA 158
SP D ++ VF K PK+ A N ++ +P W +
Sbjct: 78 SPADAAYGEAANVFGK--PKENTDFLAYNGDGFKLQVPAKWNPSKEVEF----------- 124
Query: 159 EPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVIA--------------- 203
P +++ED ++ ++ +T SI + GSPE+ +
Sbjct: 125 -PGQVLRYED----NFDSTSNLIVTVTPTDKKSITDYGSPEEFLTQVDFLLGKQAYFGKT 179
Query: 204 -SLGPFVTGNSYDPDELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKATAKGSTV 259
S G F +G + L+ETS VG + YY + T A G H L AT G +
Sbjct: 180 DSEGGFESG-AVATANLLETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVNGGKL 238
Query: 260 VLFVASANDKQW-AGVTESFENHA 282
+ A A DK+W G + EN A
Sbjct: 239 YICKAQAGDKRWFKGARKFVENAA 262
>sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria
agrestis GN=PSBP PE=2 SV=1
Length = 264
Score = 38.1 bits (87), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 160 PWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVIASL----------GPFV 209
P +++ED V ++ + +T SI + G+PE+ ++++ G
Sbjct: 121 PGQVLRYEDN----FDVTSNVSVTVTPTSKKSITDYGTPEEFLSTVDYLLGKQAYSGKTA 176
Query: 210 TGNSYDPD-----ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKATAKGSTVVL 261
+ +DPD ++E S VG + YYN + T A G H++ AT + +
Sbjct: 177 SEGGFDPDSVATANILEVSTPVVGGKQYYNISVLTRTADGDEGGKHHVISATVTDGKLYI 236
Query: 262 FVASANDKQW 271
A A DK+W
Sbjct: 237 CKAQAGDKRW 246
>sp|O49344|PSBP2_ARATH Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis
thaliana GN=PSBP2 PE=5 SV=3
Length = 125
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 19/111 (17%)
Query: 191 SIEEIGSPEKVI----------ASLGPFVTGNSYDPD-----ELIETSVEKVGDQMYYNY 235
SI + GSPE+ + A +G + +D + ++ETS +++G + YY
Sbjct: 9 SITDYGSPEQFLSQVNYLLGKQAYVGETASEGGFDANAVATANILETSTQEIGGKEYYYL 68
Query: 236 LLETPFA---LTGTHNLAKATAKGSTVVLFVASANDKQW-AGVTESFENHA 282
+ T A G H L AT G + + A A DK+W G + EN A
Sbjct: 69 SVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVENAA 119
>sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana
tabacum GN=PSBP2 PE=1 SV=2
Length = 265
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 44/210 (20%)
Query: 97 VGSYLPPSPTDPSF-----VFFKASPKDTPALRAGNVQPYQFVLPPSWKQMRVANILSGN 151
VGS + SP D ++ VF K PK + N ++ +P W +
Sbjct: 70 VGSKV--SPADAAYGEAANVFGK--PKTDTDFQTYNGDGFKLQIPSKWNPNK-------- 117
Query: 152 YCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVIASLGPFVTG 211
+ P ++FED V+ + +T SI + GSPE+ ++ + +
Sbjct: 118 ----EVEYPGQVLRFEDNFDATSNVI----VAITPTDKKSITDFGSPEQFLSQVDYLLGR 169
Query: 212 NSYDPD---------------ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKAT 253
+Y ++ETS +VG + YY + T A G H L AT
Sbjct: 170 QAYSGKTDSEGGFESDAVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGKHQLITAT 229
Query: 254 AKGSTVVLFVASANDKQW-AGVTESFENHA 282
+ + A A DK+W G + EN A
Sbjct: 230 VNDGKLYICKAQAGDKRWFKGAKKFVENTA 259
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis
thaliana GN=PSBP1 PE=1 SV=2
Length = 263
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 26/128 (20%)
Query: 164 VKFED--EKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVI----------ASLGPFVTG 211
++FED + + V+ +P T+K SI + GSPE+ + A G +
Sbjct: 124 LRFEDNFDATSNLNVMVTP----TDKK--SITDYGSPEEFLSQVNYLLGKQAYFGETASE 177
Query: 212 NSYDPD-----ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKATAKGSTVVLFV 263
+D + ++E+S ++VG + YY + T A G H L AT G + +
Sbjct: 178 GGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICK 237
Query: 264 ASANDKQW 271
A A DK+W
Sbjct: 238 AQAGDKRW 245
>sp|Q113G4|Y2125_TRIEI Probable transcriptional regulatory protein Tery_2125
OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2125
PE=3 SV=1
Length = 253
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 25/162 (15%)
Query: 111 VFFKASPKDTPALRAGNVQPYQFVLPPSWKQMRVANI--------LSGNYCQPKCAEPWV 162
VF K S + A R+G F L + ++ + I ++ Q
Sbjct: 24 VFAKVSRQIIVAARSGADPAGNFQLRTAIEKAKTVGIPNDNIERAIAKGSGQLNDGSQLE 83
Query: 163 EVKFEDEKQGKVQVVASPLIRLTNKPNASIE-----------EIGSPEKVIASLGPFVTG 211
E+++E G + ++ L N+ A + E G + G
Sbjct: 84 EIRYEGYGAGGIAIIIEALTDNRNRTAADLRSAFTKNGGNLGETGCVSWMFDQKGVVSIT 143
Query: 212 NSYDPDELIETSVEKVGDQMYYNYLLETPF----ALTGTHNL 249
SYD DEL+E SVE G+ YY + E F T T NL
Sbjct: 144 GSYDEDELLEASVE--GEAEYYEVIAEDDFQGVEVFTETTNL 183
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus
pseudonarcissus GN=PSBP PE=2 SV=1
Length = 265
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 160 PWVEVKFED--EKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVI----------ASLGP 207
P +++ED + V V+ +P T+K SI++ GSPE+ + A G
Sbjct: 122 PGQVLRYEDNFDTTSNVGVMVNP----TDKK--SIKDYGSPEQFLSQVDYLLGKQAYFGK 175
Query: 208 FVTGNSYDPD-----ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKATAKGSTV 259
++ ++P+ ++ETS VG + YY+ + T A G H L AT +
Sbjct: 176 TISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKL 235
Query: 260 VLFVASANDKQW 271
+ A A DK+W
Sbjct: 236 YICKAQAGDKRW 247
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis
sativus GN=PSBP PE=2 SV=1
Length = 263
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 26/132 (19%)
Query: 160 PWVEVKFED--EKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVI----------ASLGP 207
P +++ED + + V+ +P T+K SI++ GSPE+ + A G
Sbjct: 120 PGQVLRYEDNFDSNSNLSVIINP----TDKK--SIKDFGSPEEFLSKVDYLLGKQAYFGK 173
Query: 208 FVTGNSYDPD-----ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKATAKGSTV 259
+ +DPD ++E + V + YY + T A G H L AT +
Sbjct: 174 TASEGGFDPDAVATANILEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVNDGKL 233
Query: 260 VLFVASANDKQW 271
+ A A DK+W
Sbjct: 234 YICKAQAGDKRW 245
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
lycopersicum GN=PSBP PE=2 SV=1
Length = 258
Score = 34.7 bits (78), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 109/288 (37%), Gaps = 77/288 (26%)
Query: 19 SPEMAASLTTPLSPKFSASNGRKPSNKIQRALTAFHQKGNECTRTPILRREILKGLAVIP 78
SP +S+++P KP+ I RA QK ++ + + RR +
Sbjct: 18 SPARTSSVSSP-----------KPNQLICRA-----QKQDDASNAAVSRR--------LA 53
Query: 79 VTLIINKEPPYSEAREVEVGSYLPPSPTDPSF-----VFFKASPKDTPALRAGNVQPYQF 133
+TL+I +GS + SP D ++ VF K PK+ N ++
Sbjct: 54 LTLLIGT---------AAIGSKV--SPADAAYGEAANVFGK--PKENTDFLPYNGDGFKL 100
Query: 134 VLPPSWKQMRVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIE 193
+P W + + P +++ED ++ ++ +T SI
Sbjct: 101 QVPAKWNPSK------------EVEYPGQVLRYEDN----FDSTSNLIVAVTPTDKKSIT 144
Query: 194 EIGSPEKVIASLGPFVTGNSY----DPD-----------ELIETSVEKVGDQMYYNYLLE 238
+ GSPE+ ++ + + +Y D + L+E S VG + YY +
Sbjct: 145 DYGSPEEFLSKVDYLLGKQAYFGKTDSEGGFESGAVATRNLLEASSATVGGKEYYYLSVL 204
Query: 239 TPFA---LTGTHNLAKATAKGSTVVLFVASANDKQW-AGVTESFENHA 282
T A G H L AT + + A A DK+W G + EN A
Sbjct: 205 TRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENAA 252
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
tuberosum GN=PSBP PE=2 SV=1
Length = 260
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 104 SPTDPSF-----VFFKASPKDTPALRAGNVQPYQFVLPPSWKQMRVANILSGNYCQPKCA 158
SP D ++ VF K PK+ N ++ +P W +
Sbjct: 70 SPADAAYGEAANVFGK--PKENTDFLPYNGDGFKLQIPAKWNPSKEIEF----------- 116
Query: 159 EPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEEIGSPEKVIASLGPFVTGNSY---- 214
P +++ED ++ ++ +T SI + GSPE+ ++ + + +Y
Sbjct: 117 -PGQVLRYEDN----FDSTSNLMVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKT 171
Query: 215 DPD-----------ELIETSVEKVGDQMYYNYLLETPFA---LTGTHNLAKATAKGSTVV 260
D + L+E S VG + YY + T A G H L AT +
Sbjct: 172 DSEGGFESGAVATANLLEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVNDGKLY 231
Query: 261 LFVASANDKQW-AGVTESFENHA 282
+ A A DK+W G + EN A
Sbjct: 232 ICKAQAGDKRWFKGAKKFVENAA 254
>sp|Q60465|PR15A_CRILO Protein phosphatase 1 regulatory subunit 15A OS=Cricetulus
longicaudatus GN=Ppp1r15a PE=1 SV=1
Length = 590
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Query: 128 VQPYQFVLPPSWKQMRVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVV-ASPLIRLTN 186
+ P L +W ++RV P+ EPW Q + A PL+ +
Sbjct: 22 LSPLMGFLSRAWSRLRV----------PEAPEPWPAETVTGADQIEADAHPAPPLVPENH 71
Query: 187 KPNASIEEIGSPEKVIASLGPF--VTGNSYDPDELIETSVEKVG 228
P EE G+PE+ A+ GP V NS P+ L + +K G
Sbjct: 72 PPQGEAEESGTPEEGKAAQGPCLDVQANSSPPETLGLSDDDKQG 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,415,155
Number of Sequences: 539616
Number of extensions: 4537288
Number of successful extensions: 7909
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 7899
Number of HSP's gapped (non-prelim): 25
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)