BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023425
(282 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255575074|ref|XP_002528442.1| conserved hypothetical protein [Ricinus communis]
gi|223532118|gb|EEF33925.1| conserved hypothetical protein [Ricinus communis]
Length = 253
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/251 (84%), Positives = 231/251 (92%), Gaps = 1/251 (0%)
Query: 25 QKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNS 84
+KR +HSRNKKAME IAKGWSALKEVDRVIDYCELND RLIPLL+TAKENFELALEADNS
Sbjct: 2 EKREMHSRNKKAMEFIAKGWSALKEVDRVIDYCELNDSRLIPLLRTAKENFELALEADNS 61
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ 144
NTHAR+WLSKLHLKYHVPGACKA+GAALLV+AA+MGDP+AQYELGCRLRVENDYVQSDQQ
Sbjct: 62 NTHARFWLSKLHLKYHVPGACKAIGAALLVEAADMGDPEAQYELGCRLRVENDYVQSDQQ 121
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AFYY+EKAVDQLHPGALYLLG VYLTGDCVK+D ASALWCFHRASEKGHAGAA+AYGSLL
Sbjct: 122 AFYYLEKAVDQLHPGALYLLGAVYLTGDCVKQDFASALWCFHRASEKGHAGAAVAYGSLL 181
Query: 205 LRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
LRG QVPE L K KR S+AKKA+ + E MNPVE AKEQF++AA+AGC+LGL+WLQR
Sbjct: 182 LRGAQVPESLMKFKLKRSSSAKKAK-DAEIAEMNPVELAKEQFQIAAKAGCDLGLKWLQR 240
Query: 265 IEEEEKRLLTE 275
IEEEE RLL E
Sbjct: 241 IEEEETRLLNE 251
>gi|297825607|ref|XP_002880686.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297326525|gb|EFH56945.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/251 (81%), Positives = 232/251 (92%)
Query: 25 QKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNS 84
Q+R LHSRNKKAME +AKGWSA+KEVDRVIDYCELNDRRLIPLL+ AKENFELALEADN
Sbjct: 29 QRRGLHSRNKKAMEYVAKGWSAIKEVDRVIDYCELNDRRLIPLLRGAKENFELALEADNL 88
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ 144
NTHARYWLSKLHLKYHVPGACKA+GAALLV+AA+MG+ DAQYELGCRLRVE D+VQSDQQ
Sbjct: 89 NTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELGCRLRVEYDHVQSDQQ 148
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF+YIE AVDQLHPGALYLLG VYLTGDCVK+D+ SA+WCFHRASEKGHAGAAIAYGSLL
Sbjct: 149 AFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIAYGSLL 208
Query: 205 LRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
LRGVQVPE LTKLNA VS K+++ NLE+ MNP+E AKEQF++AA+AGC+LGL+WLQR
Sbjct: 209 LRGVQVPESLTKLNAVGVSPPKRSKKNLENPGMNPLEMAKEQFQIAARAGCDLGLQWLQR 268
Query: 265 IEEEEKRLLTE 275
+E+EEK L++E
Sbjct: 269 VEQEEKLLMSE 279
>gi|116831119|gb|ABK28514.1| unknown [Arabidopsis thaliana]
Length = 289
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/251 (81%), Positives = 231/251 (92%)
Query: 25 QKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNS 84
Q+R LHSRN+KAME +AKGWSA+KEV+RVIDYCELNDRRLIPLL+ AKENFELALEADN
Sbjct: 30 QRRGLHSRNEKAMEYVAKGWSAIKEVERVIDYCELNDRRLIPLLRGAKENFELALEADNL 89
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ 144
NTHARYWLSKLHLKYHVPGACKA+GAALLV+AA+MG+ DAQYELGCRLRVEND+VQSDQQ
Sbjct: 90 NTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELGCRLRVENDHVQSDQQ 149
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF+YIE AVDQLHPGALYLLG VYLTGDCVK+D+ SA+WCFHRASEKGHAGAAIAYGSLL
Sbjct: 150 AFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIAYGSLL 209
Query: 205 LRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
LRGVQVPE LTKLN VS K+AR NLE+ MNP+E AKEQF++AA+AGC+LGL+WLQR
Sbjct: 210 LRGVQVPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAKEQFQIAARAGCDLGLKWLQR 269
Query: 265 IEEEEKRLLTE 275
+E+EEK L+ E
Sbjct: 270 VEQEEKLLMRE 280
>gi|18400868|ref|NP_565600.1| binding protein [Arabidopsis thaliana]
gi|186502978|ref|NP_001118384.1| binding protein [Arabidopsis thaliana]
gi|4874298|gb|AAD31360.1| expressed protein [Arabidopsis thaliana]
gi|20197749|gb|AAM15230.1| expressed protein [Arabidopsis thaliana]
gi|51971683|dbj|BAD44506.1| unknown protein [Arabidopsis thaliana]
gi|91806270|gb|ABE65863.1| unknown [Arabidopsis thaliana]
gi|94442439|gb|ABF19007.1| At2g25570 [Arabidopsis thaliana]
gi|330252623|gb|AEC07717.1| binding protein [Arabidopsis thaliana]
gi|330252625|gb|AEC07719.1| binding protein [Arabidopsis thaliana]
Length = 288
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/251 (81%), Positives = 231/251 (92%)
Query: 25 QKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNS 84
Q+R LHSRN+KAME +AKGWSA+KEV+RVIDYCELNDRRLIPLL+ AKENFELALEADN
Sbjct: 30 QRRGLHSRNEKAMEYVAKGWSAIKEVERVIDYCELNDRRLIPLLRGAKENFELALEADNL 89
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ 144
NTHARYWLSKLHLKYHVPGACKA+GAALLV+AA+MG+ DAQYELGCRLRVEND+VQSDQQ
Sbjct: 90 NTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELGCRLRVENDHVQSDQQ 149
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF+YIE AVDQLHPGALYLLG VYLTGDCVK+D+ SA+WCFHRASEKGHAGAAIAYGSLL
Sbjct: 150 AFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIAYGSLL 209
Query: 205 LRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
LRGVQVPE LTKLN VS K+AR NLE+ MNP+E AKEQF++AA+AGC+LGL+WLQR
Sbjct: 210 LRGVQVPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAKEQFQIAARAGCDLGLKWLQR 269
Query: 265 IEEEEKRLLTE 275
+E+EEK L+ E
Sbjct: 270 VEQEEKLLMRE 280
>gi|449443093|ref|XP_004139315.1| PREDICTED: uncharacterized protein LOC101222228 [Cucumis sativus]
gi|449493614|ref|XP_004159376.1| PREDICTED: uncharacterized LOC101222228 [Cucumis sativus]
Length = 276
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/276 (75%), Positives = 239/276 (86%), Gaps = 2/276 (0%)
Query: 1 MQRQISKASTLKSAALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELN 60
++R +K + +A LL+ +QH R LHSRN+KAME IAKGW+ALKEVDRVIDYCELN
Sbjct: 2 LRRTFTKRFSNPTALNFLLRFSQH--RELHSRNRKAMEFIAKGWNALKEVDRVIDYCELN 59
Query: 61 DRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMG 120
DRRLIP L+TAKENFELALE DNSNTHARYWLS+LHLKYHVPGACKA+GAALLV+AA MG
Sbjct: 60 DRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHVPGACKAVGAALLVEAAEMG 119
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
D DAQYELGCRLRVEN YVQSDQQAFY++EKAVDQLHPGAL+LLG VYLTGDCVKKDIAS
Sbjct: 120 DADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIAS 179
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPV 240
ALWCFHRASEKGHAGAAIAYGSLLL+GV+VPE LTK + K S +KAR N ++++M+ +
Sbjct: 180 ALWCFHRASEKGHAGAAIAYGSLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSI 239
Query: 241 EKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLTES 276
E A+EQF AA +GC+LGL+WL R+EEEEK L TES
Sbjct: 240 EMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES 275
>gi|224054484|ref|XP_002298283.1| predicted protein [Populus trichocarpa]
gi|222845541|gb|EEE83088.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/256 (80%), Positives = 228/256 (89%), Gaps = 1/256 (0%)
Query: 26 KRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSN 85
+R +H RNKKAME IAKGWSALKEVDRVIDYCE ND+RLIPLL+TAKENF+LALE DNSN
Sbjct: 3 QREIHGRNKKAMEFIAKGWSALKEVDRVIDYCERNDKRLIPLLRTAKENFQLALEVDNSN 62
Query: 86 THARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQA 145
THARYWLSKLHLKYHVPG A+G ALLV+AANMGDP+AQYELGCRLRVENDYVQSDQQA
Sbjct: 63 THARYWLSKLHLKYHVPGQNHAIGVALLVEAANMGDPEAQYELGCRLRVENDYVQSDQQA 122
Query: 146 FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL 205
FYYIEKAV++LHPGALYLLG VYLTGDCVKKDIASALWCFHRASEKGH GAAIAYGSLLL
Sbjct: 123 FYYIEKAVEKLHPGALYLLGAVYLTGDCVKKDIASALWCFHRASEKGHVGAAIAYGSLLL 182
Query: 206 RGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRI 265
RG QVPE LTK + KR S+AKK + E+ MNPVE+AKEQF++AA+AG +LGL+WLQR+
Sbjct: 183 RGAQVPEHLTKFSLKRGSSAKKMNS-AENTEMNPVERAKEQFQIAAKAGSDLGLKWLQRL 241
Query: 266 EEEEKRLLTESSRIET 281
EEEE RLL ES E+
Sbjct: 242 EEEENRLLAESHSKES 257
>gi|21554301|gb|AAM63376.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/251 (80%), Positives = 228/251 (90%)
Query: 25 QKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNS 84
Q+R LHSRNKKAME +AKGWSA+KEVDRVI YCELNDRRLIPLL+ AKENFELALEADN
Sbjct: 30 QRRGLHSRNKKAMEYVAKGWSAIKEVDRVIYYCELNDRRLIPLLRGAKENFELALEADNL 89
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ 144
NTHARYWLSK HLKY VPGACKA+GAALLV+AA+MG+ DAQYELGCRLRVEND+VQSDQQ
Sbjct: 90 NTHARYWLSKFHLKYLVPGACKAVGAALLVEAADMGNADAQYELGCRLRVENDHVQSDQQ 149
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF+YIE AVDQLHPGALYLLG VYLTGDCVK+D+ SA+WCFHRASEKGHAGAAIAYGSLL
Sbjct: 150 AFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIAYGSLL 209
Query: 205 LRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
LRGVQVPE LTKLN VS K+AR NLE+ MNP+E A+EQF++AA+AGC+LGL+WLQR
Sbjct: 210 LRGVQVPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAEEQFQIAARAGCDLGLKWLQR 269
Query: 265 IEEEEKRLLTE 275
+E+EEK L+ E
Sbjct: 270 VEQEEKLLMRE 280
>gi|212275053|ref|NP_001130481.1| uncharacterized protein LOC100191579 [Zea mays]
gi|194689250|gb|ACF78709.1| unknown [Zea mays]
gi|194701718|gb|ACF84943.1| unknown [Zea mays]
gi|223948935|gb|ACN28551.1| unknown [Zea mays]
gi|238015262|gb|ACR38666.1| unknown [Zea mays]
gi|413926183|gb|AFW66115.1| hypothetical protein ZEAMMB73_304309 [Zea mays]
Length = 284
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/248 (75%), Positives = 220/248 (88%), Gaps = 2/248 (0%)
Query: 24 HQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADN 83
+Q+RW+H RNKKAMEL+AKGWSAL+EVDRVIDY +LND+RLIPLL+ AKENFELALE DN
Sbjct: 30 NQQRWMHDRNKKAMELVAKGWSALQEVDRVIDYADLNDKRLIPLLRGAKENFELALEIDN 89
Query: 84 SNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ 143
NTHARYWL K+H KYHVPGACKA+GAALLV+AANMGDPDAQYELGCRLR+ENDYVQSDQ
Sbjct: 90 GNTHARYWLGKMHFKYHVPGACKAVGAALLVEAANMGDPDAQYELGCRLRIENDYVQSDQ 149
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QAF+YIE+AVDQLHPGALYLLG VYLTGDCVK+D+ASALWCFHRASEKGHAGAAIAYGSL
Sbjct: 150 QAFHYIEQAVDQLHPGALYLLGAVYLTGDCVKRDMASALWCFHRASEKGHAGAAIAYGSL 209
Query: 204 LLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQ 263
LL+G ++PE +T+ N+ + + K R + +PV+ AKEQF++AA+AGC+LGLRWL+
Sbjct: 210 LLKGAEIPEVITRFNSGKSPSTGKMRKRTQQQ--DPVKLAKEQFQIAAEAGCDLGLRWLK 267
Query: 264 RIEEEEKR 271
R+E E +
Sbjct: 268 RLEAYENQ 275
>gi|195642910|gb|ACG40923.1| hypothetical protein [Zea mays]
Length = 284
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 185/248 (74%), Positives = 218/248 (87%), Gaps = 2/248 (0%)
Query: 24 HQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADN 83
+Q+RW+H RNKKAMEL+AKGWSAL+EVDRVIDY + ND+RLIPLL+ AKENFELALE DN
Sbjct: 30 NQQRWMHDRNKKAMELVAKGWSALQEVDRVIDYADRNDKRLIPLLRGAKENFELALEIDN 89
Query: 84 SNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ 143
NTHARYWL K+H KYHVPGACKA+GAALLV+AANMGDPDAQYELGCRLR+ENDYVQSDQ
Sbjct: 90 GNTHARYWLGKMHFKYHVPGACKAVGAALLVEAANMGDPDAQYELGCRLRIENDYVQSDQ 149
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QAF+YIE+AVDQLHPGALYLLG VYLTGDCVK+D+ASALWCFHRASEKGHAGAAIAYGSL
Sbjct: 150 QAFHYIEQAVDQLHPGALYLLGAVYLTGDCVKRDMASALWCFHRASEKGHAGAAIAYGSL 209
Query: 204 LLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQ 263
LL+G ++PE +T+ N+ + + K R +PV+ AKEQF++AA+AGC+LGLRWL+
Sbjct: 210 LLKGAEIPEVITRFNSGKSPSTGKMRKRTLQQ--DPVKLAKEQFQIAAEAGCDLGLRWLK 267
Query: 264 RIEEEEKR 271
R+E E +
Sbjct: 268 RLEAYENQ 275
>gi|242064434|ref|XP_002453506.1| hypothetical protein SORBIDRAFT_04g007030 [Sorghum bicolor]
gi|241933337|gb|EES06482.1| hypothetical protein SORBIDRAFT_04g007030 [Sorghum bicolor]
Length = 284
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/253 (72%), Positives = 222/253 (87%), Gaps = 2/253 (0%)
Query: 19 LQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELA 78
L + ++ +RW+H RNKKAMEL+AKGWSAL+EVDRVIDY + ND+RLIPLL+ AKENFELA
Sbjct: 25 LAAARNPQRWMHDRNKKAMELVAKGWSALQEVDRVIDYADRNDKRLIPLLRGAKENFELA 84
Query: 79 LEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
LE DN NTHARYWL K+H KYHVPGACKA+GAALLV+AANMGDPDAQYELGCRLR+ENDY
Sbjct: 85 LEIDNDNTHARYWLGKMHFKYHVPGACKAVGAALLVEAANMGDPDAQYELGCRLRIENDY 144
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
VQSDQQAF+YIE+AVDQLHPGALYLLG VYLTGDCVK+DIASALWCFHRASEKGHAGAA+
Sbjct: 145 VQSDQQAFHYIEQAVDQLHPGALYLLGAVYLTGDCVKRDIASALWCFHRASEKGHAGAAV 204
Query: 199 AYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLG 258
AYGSLLL+G ++PE +T+ N+ + + K R + +P++ AKEQF++AA+AGC+LG
Sbjct: 205 AYGSLLLKGAEIPEVITRFNSGKSPSTGKMRK--RTLQQDPIKLAKEQFQIAAEAGCDLG 262
Query: 259 LRWLQRIEEEEKR 271
LRWL+R+E+ E +
Sbjct: 263 LRWLKRLEDYENQ 275
>gi|115444905|ref|NP_001046232.1| Os02g0202600 [Oryza sativa Japonica Group]
gi|46390082|dbj|BAD15499.1| unknown protein [Oryza sativa Japonica Group]
gi|113535763|dbj|BAF08146.1| Os02g0202600 [Oryza sativa Japonica Group]
gi|215678817|dbj|BAG95254.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215687037|dbj|BAG90883.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708767|dbj|BAG94036.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622387|gb|EEE56519.1| hypothetical protein OsJ_05803 [Oryza sativa Japonica Group]
Length = 285
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/245 (74%), Positives = 214/245 (87%), Gaps = 2/245 (0%)
Query: 26 KRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSN 85
+RW+H RNKKAMEL+AKGWSAL+EVDRVIDY + ND+RLIPLL+ AKENFELALE DN N
Sbjct: 33 QRWIHDRNKKAMELVAKGWSALQEVDRVIDYADRNDKRLIPLLRGAKENFELALEIDNMN 92
Query: 86 THARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQA 145
THAR WL+K+H KYHVPGACKA+GAALLV+AANMGDPDAQYELGC LR+ENDYV SDQQA
Sbjct: 93 THARLWLAKMHFKYHVPGACKAIGAALLVEAANMGDPDAQYELGCHLRIENDYVHSDQQA 152
Query: 146 FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL 205
FYYIEKAVDQLHPGALYLLG VYLTGDCVK+DIASA+WCFHRASEKGH+GAAIAYGSLLL
Sbjct: 153 FYYIEKAVDQLHPGALYLLGAVYLTGDCVKRDIASAMWCFHRASEKGHSGAAIAYGSLLL 212
Query: 206 RGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRI 265
+G +VPE +T+ N+ + + K R +PV+ AKEQF++AA+AGC+LGLRWL+R+
Sbjct: 213 KGAEVPEVITRFNSGKSPSTGKMRKRPIQQ--DPVKLAKEQFQIAAEAGCDLGLRWLKRL 270
Query: 266 EEEEK 270
+ EK
Sbjct: 271 GDYEK 275
>gi|356568431|ref|XP_003552414.1| PREDICTED: uncharacterized protein LOC100817827 [Glycine max]
Length = 277
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/263 (72%), Positives = 221/263 (84%), Gaps = 2/263 (0%)
Query: 13 SAALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAK 72
S + Q NQ +R LHSRNKKA+E IAKGW+ALKEVDRVIDY + ++ LL+TAK
Sbjct: 15 STVVSPFQFNQ--QRALHSRNKKALEFIAKGWNALKEVDRVIDYSDPKHSGIVSLLRTAK 72
Query: 73 ENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRL 132
ENFELALEADN+NTHARYWLS+LH+KY VPGA KA+GAALLV+AA MGDP+AQY LGC L
Sbjct: 73 ENFELALEADNTNTHARYWLSRLHMKYPVPGANKAVGAALLVEAAEMGDPEAQYALGCHL 132
Query: 133 RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
RVENDYVQSDQQAFYY+EKAVDQLHPGALYLLG VYLTGDCVKKDIASALWCFHRASEKG
Sbjct: 133 RVENDYVQSDQQAFYYLEKAVDQLHPGALYLLGAVYLTGDCVKKDIASALWCFHRASEKG 192
Query: 193 HAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQ 252
HAGAAIAYGSLLL+GV+VPE + K + R +AA + N + ++PVE A+E+F++AA+
Sbjct: 193 HAGAAIAYGSLLLKGVEVPESVIKFSLTRGAAAHRRGRNKGALAIDPVEMAREKFQIAAK 252
Query: 253 AGCNLGLRWLQRIEEEEKRLLTE 275
AGC LG +WL R+EEEEKR LTE
Sbjct: 253 AGCELGFKWLARLEEEEKRALTE 275
>gi|218190274|gb|EEC72701.1| hypothetical protein OsI_06286 [Oryza sativa Indica Group]
Length = 285
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/245 (74%), Positives = 214/245 (87%), Gaps = 2/245 (0%)
Query: 26 KRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSN 85
+RW+H RNKKA+EL+AKGWSAL+EVDRVIDY + ND+RLIPLL+ AKENFELALE DN N
Sbjct: 33 QRWIHDRNKKALELVAKGWSALQEVDRVIDYADRNDKRLIPLLRGAKENFELALEIDNMN 92
Query: 86 THARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQA 145
THAR WL+K+H KYHVPGACKA+GAALLV+AANMGDPDAQYELGC LR+ENDYV SDQQA
Sbjct: 93 THARLWLAKMHFKYHVPGACKAIGAALLVEAANMGDPDAQYELGCHLRIENDYVHSDQQA 152
Query: 146 FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL 205
FYYIEKAVDQLHPGALYLLG VYLTGDCVK+DIASA+WCFHRASEKGH+GAAIAYGSLLL
Sbjct: 153 FYYIEKAVDQLHPGALYLLGAVYLTGDCVKRDIASAMWCFHRASEKGHSGAAIAYGSLLL 212
Query: 206 RGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRI 265
+G +VPE +T+ N+ + + K R +PV+ AKEQF++AA+AGC+LGLRWL+R+
Sbjct: 213 KGAEVPEVITRFNSGKSPSTGKMRKRPIQQ--DPVKLAKEQFQIAAEAGCDLGLRWLKRL 270
Query: 266 EEEEK 270
+ EK
Sbjct: 271 GDYEK 275
>gi|356526737|ref|XP_003531973.1| PREDICTED: uncharacterized protein LOC100791197 [Glycine max]
Length = 276
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/274 (69%), Positives = 225/274 (82%), Gaps = 2/274 (0%)
Query: 1 MQRQISKASTLKSAALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELN 60
+ R + LK + + Q NQ +R LHSRNKKA+E IAKGW+ALKEVDRVIDY +
Sbjct: 2 LPRALLAKFILKPSTVSPFQFNQ--QRALHSRNKKALEFIAKGWNALKEVDRVIDYSDPK 59
Query: 61 DRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMG 120
++ LL+TAKENFELALEADN+NTHARYWLS+LH+KY VPGA KA+GAALLV+AA MG
Sbjct: 60 HSGIVSLLRTAKENFELALEADNTNTHARYWLSRLHMKYPVPGANKAVGAALLVEAAEMG 119
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
DP+AQY LGC LRVENDYVQSDQQAFYY+EKAVDQLHPGALYLLG VYLTGDCV+KDIAS
Sbjct: 120 DPEAQYALGCHLRVENDYVQSDQQAFYYLEKAVDQLHPGALYLLGAVYLTGDCVRKDIAS 179
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPV 240
ALWCFHRASEKGHAGAAIAYGSLLL+GV+VPE + K + R +AA + N + ++PV
Sbjct: 180 ALWCFHRASEKGHAGAAIAYGSLLLKGVEVPESVIKFSLTRGAAAHRRGRNKGALAIDPV 239
Query: 241 EKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLT 274
E A+E+F++AA+AGC LG +WL R+EEEEKR LT
Sbjct: 240 EMAREKFQIAAKAGCELGFKWLARLEEEEKRALT 273
>gi|255647974|gb|ACU24444.1| unknown [Glycine max]
Length = 276
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/274 (69%), Positives = 225/274 (82%), Gaps = 2/274 (0%)
Query: 1 MQRQISKASTLKSAALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELN 60
+ R + LK + + Q NQ +R LHSRNKKA+E IAKGW+ALKEVDRVIDY +
Sbjct: 2 LPRALLAKFILKPSTVSPFQFNQ--QRALHSRNKKALEFIAKGWNALKEVDRVIDYSDPK 59
Query: 61 DRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMG 120
++ LL+TAKENFELALEADN+NTHARYWLS+LH+KY VPGA KA+GAALLV+AA MG
Sbjct: 60 HSGIVSLLRTAKENFELALEADNTNTHARYWLSRLHMKYPVPGANKAVGAALLVEAAEMG 119
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
DP+AQY LGC LRVENDYVQSDQQAFYY+EKAVDQLHPGALYLLG VYLTGDCV+KDIAS
Sbjct: 120 DPEAQYALGCHLRVENDYVQSDQQAFYYLEKAVDQLHPGALYLLGAVYLTGDCVRKDIAS 179
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPV 240
ALWCFHRASEKGHAGAAIAYGSLLL+GV+VPE +TK + R +AA + N + ++PV
Sbjct: 180 ALWCFHRASEKGHAGAAIAYGSLLLKGVEVPESVTKFSLTRGAAAHRRGRNKGALAIDPV 239
Query: 241 EKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLT 274
E A+ +F++AA+AGC LG +WL R+EEEEKR LT
Sbjct: 240 EMARGKFQIAAKAGCELGFKWLARLEEEEKRALT 273
>gi|357139815|ref|XP_003571473.1| PREDICTED: uncharacterized protein LOC100829405 [Brachypodium
distachyon]
Length = 290
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/253 (72%), Positives = 220/253 (86%), Gaps = 2/253 (0%)
Query: 19 LQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELA 78
L S + +RW+H RNKKAMEL+AKGWSAL+EVDRVID+ + ND+RLIPLL+ AKENFELA
Sbjct: 32 LASALNHQRWMHDRNKKAMELVAKGWSALQEVDRVIDFADRNDKRLIPLLRGAKENFELA 91
Query: 79 LEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
LE DN NTHAR WL+K+H KYHVPGACKA+GAALLV+AANMGDP+AQYELGCRLR+END+
Sbjct: 92 LEIDNMNTHARCWLAKMHFKYHVPGACKAIGAALLVEAANMGDPEAQYELGCRLRIENDH 151
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
VQSD QAF+YIEKAVDQLHPGALYLLG VYLTGDCVK+DIASA+WCFHRASEKGHAGAAI
Sbjct: 152 VQSDHQAFHYIEKAVDQLHPGALYLLGAVYLTGDCVKRDIASAMWCFHRASEKGHAGAAI 211
Query: 199 AYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLG 258
AYGSLLL+G +VPE +T+LN+ + + KA S +PV+ AKEQF++AA+AGC+LG
Sbjct: 212 AYGSLLLKGAEVPEVITRLNSGKSPSTGKAWK--RSIQQDPVKLAKEQFQIAAEAGCDLG 269
Query: 259 LRWLQRIEEEEKR 271
LRWL+ + + EK+
Sbjct: 270 LRWLKNLGDYEKQ 282
>gi|326502428|dbj|BAJ95277.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520071|dbj|BAK03960.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 284
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/264 (69%), Positives = 223/264 (84%), Gaps = 5/264 (1%)
Query: 10 TLKSAALGL---LQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIP 66
T S+ LG L S + +RW+H RNKKAMEL+AKGWSAL+EVDRVID+ + ND+RLIP
Sbjct: 13 TASSSPLGRVSQLASALNHQRWIHDRNKKAMELVAKGWSALQEVDRVIDFADRNDKRLIP 72
Query: 67 LLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQY 126
LL+ AKENFELALE DN NTHAR WL+K+H KYHVPGACKA+GAALLV+AANMGDP+AQY
Sbjct: 73 LLRGAKENFELALEIDNMNTHARCWLAKMHFKYHVPGACKAIGAALLVEAANMGDPEAQY 132
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
ELGCRLRVEND+VQSDQQAF+YIEKAVDQLHP ALYLLG VY+TGDCVK+DIASA+WCFH
Sbjct: 133 ELGCRLRVENDHVQSDQQAFHYIEKAVDQLHPAALYLLGAVYITGDCVKRDIASAMWCFH 192
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQ 246
RASEKGHAGAA+AYGSLLL+G +VPE +T+ N+ + + K R + +PV+ AKEQ
Sbjct: 193 RASEKGHAGAAVAYGSLLLKGAEVPEVITRFNSGKSPSTGKVRKR--TIQQDPVKLAKEQ 250
Query: 247 FEVAAQAGCNLGLRWLQRIEEEEK 270
F++AA++G +LGLRWL+R+ + EK
Sbjct: 251 FQIAAESGSDLGLRWLKRLGDYEK 274
>gi|225445458|ref|XP_002285102.1| PREDICTED: uncharacterized protein LOC100250962 [Vitis vinifera]
Length = 266
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/267 (71%), Positives = 222/267 (83%), Gaps = 9/267 (3%)
Query: 9 STLKSAALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLL 68
++LK +AL L Q N +R LHSRNKKA E +A+G+SA+KEVDRV+D E N R LIPLL
Sbjct: 9 TSLKPSALHLFQFNL--QRGLHSRNKKAAEFLAQGFSAIKEVDRVMDKSEPNSRLLIPLL 66
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
+ AKENFELALEADNSN HARYWLSKLHLKYHVPGACKA+GAALLV+AA+MGD +AQYEL
Sbjct: 67 RKAKENFELALEADNSNAHARYWLSKLHLKYHVPGACKAIGAALLVEAADMGDAEAQYEL 126
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G RLR EN+YVQS QQAFYY+EKA DQLH GALYLL +YLTGD +KKD+ASALWCFH+A
Sbjct: 127 GRRLRYENEYVQSGQQAFYYLEKAADQLHTGALYLLAAIYLTGDGLKKDMASALWCFHKA 186
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFE 248
SE+GHAGAAI YGSLLLRGVQ+PE +TKL K A + S +++PVE AKEQF+
Sbjct: 187 SERGHAGAAIVYGSLLLRGVQLPESVTKLY-------KTASKSSGSAVLDPVEMAKEQFQ 239
Query: 249 VAAQAGCNLGLRWLQRIEEEEKRLLTE 275
+AA+AGC LG +WLQR+EEEEKRLLTE
Sbjct: 240 IAAKAGCELGFKWLQRLEEEEKRLLTE 266
>gi|297738935|emb|CBI28180.3| unnamed protein product [Vitis vinifera]
Length = 916
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/262 (70%), Positives = 217/262 (82%), Gaps = 9/262 (3%)
Query: 9 STLKSAALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLL 68
++LK +AL L Q N +R LHSRNKKA E +A+G+SA+KEVDRV+D E N R LIPLL
Sbjct: 9 TSLKPSALHLFQFNL--QRGLHSRNKKAAEFLAQGFSAIKEVDRVMDKSEPNSRLLIPLL 66
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
+ AKENFELALEADNSN HARYWLSKLHLKYHVPGACKA+GAALLV+AA+MGD +AQYEL
Sbjct: 67 RKAKENFELALEADNSNAHARYWLSKLHLKYHVPGACKAIGAALLVEAADMGDAEAQYEL 126
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G RLR EN+YVQS QQAFYY+EKA DQLH GALYLL +YLTGD +KKD+ASALWCFH+A
Sbjct: 127 GRRLRYENEYVQSGQQAFYYLEKAADQLHTGALYLLAAIYLTGDGLKKDMASALWCFHKA 186
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFE 248
SE+GHAGAAI YGSLLLRGVQ+PE +TKL K A + S +++PVE AKEQF+
Sbjct: 187 SERGHAGAAIVYGSLLLRGVQLPESVTKLY-------KTASKSSGSAVLDPVEMAKEQFQ 239
Query: 249 VAAQAGCNLGLRWLQRIEEEEK 270
+AA+AGC LG +WLQR+EEEEK
Sbjct: 240 IAAKAGCELGFKWLQRLEEEEK 261
>gi|145329621|ref|NP_001077960.1| binding protein [Arabidopsis thaliana]
gi|330252624|gb|AEC07718.1| binding protein [Arabidopsis thaliana]
Length = 204
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 170/186 (91%)
Query: 90 YWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYI 149
YWLSKLHLKYHVPGACKA+GAALLV+AA+MG+ DAQYELGCRLRVEND+VQSDQQAF+YI
Sbjct: 11 YWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELGCRLRVENDHVQSDQQAFHYI 70
Query: 150 EKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ 209
E AVDQLHPGALYLLG VYLTGDCVK+D+ SA+WCFHRASEKGHAGAAIAYGSLLLRGVQ
Sbjct: 71 ENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIAYGSLLLRGVQ 130
Query: 210 VPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEE 269
VPE LTKLN VS K+AR NLE+ MNP+E AKEQF++AA+AGC+LGL+WLQR+E+EE
Sbjct: 131 VPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAKEQFQIAARAGCDLGLKWLQRVEQEE 190
Query: 270 KRLLTE 275
K L+ E
Sbjct: 191 KLLMRE 196
>gi|147821401|emb|CAN63496.1| hypothetical protein VITISV_011671 [Vitis vinifera]
Length = 239
Score = 302 bits (774), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 161/267 (60%), Positives = 188/267 (70%), Gaps = 45/267 (16%)
Query: 9 STLKSAALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLL 68
++LK +AL L Q N +R LHSRNKKA E +A+G+SA+KEVDRV+D E N R LIPLL
Sbjct: 18 TSLKPSALHLFQFNL--QRGLHSRNKKAAEFLAQGFSAIKEVDRVMDKSEPNSRLLIPLL 75
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
+ AKENFELALEADNSN HARYWLSKLHLKYHVPGACKA+GAALLV+AA+MGD +AQYEL
Sbjct: 76 RKAKENFELALEADNSNAHARYWLSKLHLKYHVPGACKAIGAALLVEAADMGDAEAQYEL 135
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G RLR EN+YVQS QQAFYY+EKA DQ H G
Sbjct: 136 GRRLRYENEYVQSGQQAFYYLEKAADQGHAG----------------------------- 166
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFE 248
AAI YGSLLLRGVQ+PE +TKL K A + S +++PVE AKEQF+
Sbjct: 167 -------AAIVYGSLLLRGVQLPESVTKLY-------KTASKSSGSAVLDPVEMAKEQFQ 212
Query: 249 VAAQAGCNLGLRWLQRIEEEEKRLLTE 275
+AA+AGC LG +WLQR+EEEEKRLLTE
Sbjct: 213 IAAKAGCELGFKWLQRLEEEEKRLLTE 239
>gi|168066926|ref|XP_001785380.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663002|gb|EDQ49793.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 117/177 (66%), Gaps = 4/177 (2%)
Query: 38 ELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHL 97
E + KG +AL E++R+ Y + ND RL PLLKTAKE+FELALE D N A WL++LHL
Sbjct: 1 EFMGKGLTALGEIERLSPYTDFNDIRLRPLLKTAKESFELALEVDKDNVVAMLWLARLHL 60
Query: 98 KYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE----NDYVQSDQQAFYYIEKAV 153
Y++PGAC GA LL AA G DAQYEL CR+R E D D + F Y+E A
Sbjct: 61 YYNIPGACLRSGANLLETAAESGLADAQYELACRIRSEAALLGDGDAMDDRTFKYLESAA 120
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
Q H GAL+L+GT+YL+G V++D +A WCF +A+E+G+ A+ Y SL+ +G+ +
Sbjct: 121 CQKHAGALFLVGTMYLSGKHVRRDSKAAAWCFRKAAEQGYIPASTVYASLVSKGINL 177
>gi|82701239|ref|YP_410805.1| Sel1 repeat-containing protein [Nitrosospira multiformis ATCC
25196]
gi|82409304|gb|ABB73413.1| Sel1-like repeat [Nitrosospira multiformis ATCC 25196]
Length = 489
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GDPDAQY LG R + QQA + KA +Q + A Y +G Y +G V
Sbjct: 341 AAEQGDPDAQYNLGVRYDTGRGIEKDPQQAVAWYRKAAEQGYARAQYSVGVKYDSGQGVP 400
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG-------VQVPECLTKLNAKRVSAAKKA 228
+D A AL + +A+E+GHAGA G L G V+ + + +A AK+
Sbjct: 401 QDYAQALAWYLKAAEQGHAGAQTNLGVLYYNGNGVKQDYVEADKWFSIASAGGYEDAKEN 460
Query: 229 RANLESNLMNPVEKA 243
R +E LM P++ A
Sbjct: 461 RELME-KLMTPMQIA 474
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AA AA G AQ+ LG ++ ++QA + +A +Q P A Y LG Y
Sbjct: 299 AAWYRKAAEQGYAPAQFNLGVMYATGKGVIRDERQAVSWYRQAAEQGDPDAQYNLGVRYD 358
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
TG ++KD A+ + +A+E+G+A A + G G VP+ + A + AA++
Sbjct: 359 TGRGIEKDPQQAVAWYRKAAEQGYARAQYSVGVKYDSGQGVPQDYAQALAWYLKAAEQGH 418
Query: 230 ANLESNL 236
A ++NL
Sbjct: 419 AGAQTNL 425
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG QS+Q+A + KA +Q + A + LG ++ TG+ V
Sbjct: 197 AAEQGYGEAQYALGVLYAKGRGVAQSNQEAASWYRKAAEQGNTDAQFNLGMMFATGEGVT 256
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A + +A+++G+A A G +G+ +PE + A AA++ A + N
Sbjct: 257 QDYRQAASLYRQAADQGYARAQFKLGVANAKGLGIPEDAYEAAAWYRKAAEQGYAPAQFN 316
Query: 236 L 236
L
Sbjct: 317 L 317
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG Q QQA ++ +A D + A Y LG +Y G V+
Sbjct: 89 AAEQGDAPAQSMLGYMYLKGQGVPQDYQQAMFWYFRAADSGYAVAQYNLGVMYAKGQGVE 148
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
KD AL + +A+E+GHA A G + L+G V +
Sbjct: 149 KDYRHALSWYLKAAEQGHAPAQAIMGFMYLKGQGVEQ 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G+ DAQ+ LG Q +QA + +A +Q A +LG +YL G V
Sbjct: 53 AANAGNADAQFNLGVLYSRGRGVPQDHEQAAKWYRRAAEQGDAPAQSMLGYMYLKGQGVP 112
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A++ + RA++ G+A A G + +G V
Sbjct: 113 QDYQQAMFWYFRAADSGYAVAQYNLGVMYAKGQGV 147
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA+ G AQY LG VE DY + A + KA +Q H A ++G +YL G
Sbjct: 125 AADSGYAVAQYNLGVMYAKGQGVEKDY----RHALSWYLKAAEQGHAPAQAIMGFMYLKG 180
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V++D A+ + +A+E+G+ A A G L +G V + + + AA++ +
Sbjct: 181 QGVEQDDHQAVSWYRKAAEQGYGEAQYALGVLYAKGRGVAQSNQEAASWYRKAAEQGNTD 240
Query: 232 LESNL 236
+ NL
Sbjct: 241 AQFNL 245
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 53/130 (40%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ A+Y L L+ K A+ AA G+ DAQ+ LG Q
Sbjct: 198 AEQGYGEAQYALGVLYAKGRGVAQSNQEAASWYRKAAEQGNTDAQFNLGMMFATGEGVTQ 257
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+QA +A DQ + A + LG G + +D A + +A+E+G+A A
Sbjct: 258 DYRQAASLYRQAADQGYARAQFKLGVANAKGLGIPEDAYEAAAWYRKAAEQGYAPAQFNL 317
Query: 201 GSLLLRGVQV 210
G + G V
Sbjct: 318 GVMYATGKGV 327
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+E G + + DY ++ Q KA + + A + LG +Y G V +D A +
Sbjct: 31 FEDGMKFVLSKDYTKAMQS----FRKAANAGNADAQFNLGVLYSRGRGVPQDHEQAAKWY 86
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
RA+E+G A A G + L+G VP+ + AA A + NL
Sbjct: 87 RRAAEQGDAPAQSMLGYMYLKGQGVPQDYQQAMFWYFRAADSGYAVAQYNL 137
>gi|365920013|ref|ZP_09444368.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364578611|gb|EHM55810.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 146
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 51/108 (47%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A L A GD +AQY L CR + Q +A ++EKA Q HP A Y LG +Y
Sbjct: 29 AQLTAQAEAGDAEAQYRLACRYSKGDGITQDYGKAIAWLEKAAAQNHPDAAYNLGALYGD 88
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN 218
G V KD A A +A+ +GH A IA L + Q P T N
Sbjct: 89 GTVVPKDTAKARQWLEKAAAQGHEAAPIALHILDEQNAQTPPSGTNTN 136
>gi|338708084|ref|YP_004662285.1| Sel1 domain-containing protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294888|gb|AEI37995.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 593
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N+ A+ L+ ++L+ A L AA+ G +AQY L R D Q
Sbjct: 407 ADQGNSAAQNNLAVMYLEGKSIPKDSAKAFQLFQKAADQGYAEAQYHLATMYRTGKDLPQ 466
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
++AF +KA Q + A Y LG +YL G + KD A A+ F +A+E+G A
Sbjct: 467 DKKKAFELYQKAAAQDYATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNL 526
Query: 201 GSLLLRGVQVPECLTK 216
++ ++G +P+ TK
Sbjct: 527 ANMYVKGEGIPQDKTK 542
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Query: 65 IPLLKTAKENFELALEADNSN-THARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPD 123
IP KT + FEL +A + A+Y L ++L+ A AA GDP+
Sbjct: 320 IPQDKT--KAFELYQKAAAQDYATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPE 377
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQ+ L +Q +AF +KA DQ + A L +YL G + KD A A
Sbjct: 378 AQFNLANMYVKGEGILQDKTKAFQLFQKAADQGNSAAQNNLAVMYLEGKSIPKDSAKAFQ 437
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
F +A+++G+A A ++ G +P+ K AA + A + NL
Sbjct: 438 LFQKAADQGYAEAQYHLATMYRTGKDLPQDKKKAFELYQKAAAQDYATAQYNL 490
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ N A+ L+ L+ KA L AA+ + +AQ L R + ++
Sbjct: 227 ANQGNAEAQNGLAVLYWTGEGISQNKAQALQLFQKAADQDNAEAQNNLAKIYRGGDGILK 286
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+AF +KA DQ + A Y L T+YLTG+ + +D A + +A+ + +A A
Sbjct: 287 DSAKAFQLFQKAADQGYAEAQYHLATMYLTGEGIPQDKTKAFELYQKAAAQDYATAQYNL 346
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN 238
G + L G +P+ K AA++ + NL N
Sbjct: 347 GVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNLAN 384
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N A+ L+K++ A L AA+ G +AQY L Q
Sbjct: 263 ADQDNAEAQNNLAKIYRGGDGILKDSAKAFQLFQKAADQGYAEAQYHLATMYLTGEGIPQ 322
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+AF +KA Q + A Y LG +YL G + KD A A+ F +A+E+G A
Sbjct: 323 DKTKAFELYQKAAAQDYATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNL 382
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
++ ++G + + TK AA + + ++NL
Sbjct: 383 ANMYVKGEGILQDKTKAFQLFQKAADQGNSAAQNNL 418
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 67 LLKTAKENFELALEA-DNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQ 125
+LK + + F+L +A D A+Y L+ ++L K L AA AQ
Sbjct: 284 ILKDSAKAFQLFQKAADQGYAEAQYHLATMYLTGEGIPQDKTKAFELYQKAAAQDYATAQ 343
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y LG D + +A + +KA +Q P A + L +Y+ G+ + +D A F
Sbjct: 344 YNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNLANMYVKGEGILQDKTKAFQLF 403
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN------- 238
+A+++G++ A + L G +P+ K AA + A + +L
Sbjct: 404 QKAADQGNSAAQNNLAVMYLEGKSIPKDSAKAFQLFQKAADQGYAEAQYHLATMYRTGKD 463
Query: 239 -PVEKAKEQFEV----AAQ----AGCNLGLRWLQ 263
P +K K+ FE+ AAQ A NLG+ +L+
Sbjct: 464 LPQDK-KKAFELYQKAAAQDYATAQYNLGVMYLE 496
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L +AN G+ +AQ L Q+ QA +KA DQ + A L +Y G
Sbjct: 222 LFQKSANQGNAEAQNGLAVLYWTGEGISQNKAQALQLFQKAADQDNAEAQNNLAKIYRGG 281
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
D + KD A A F +A+++G+A A ++ L G +P+ TK AA + A
Sbjct: 282 DGILKDSAKAFQLFQKAADQGYAEAQYHLATMYLTGEGIPQDKTKAFELYQKAAAQDYAT 341
Query: 232 LESNL 236
+ NL
Sbjct: 342 AQYNL 346
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 19/235 (8%)
Query: 35 KAMELIAKGWS---ALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYW 91
KA EL K + A + + + Y E D IP TAK A+ + A++
Sbjct: 326 KAFELYQKAAAQDYATAQYNLGVMYLEGKD---IPK-DTAKAVLFFQKAAEQGDPEAQFN 381
Query: 92 LSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIE 150
L+ +++K K L AA+ G+ AQ L + +E + D +AF +
Sbjct: 382 LANMYVKGEGILQDKTKAFQLFQKAADQGNSAAQNNLAV-MYLEGKSIPKDSAKAFQLFQ 440
Query: 151 KAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KA DQ + A Y L T+Y TG + +D A + +A+ + +A A G + L G +
Sbjct: 441 KAADQGYAEAQYHLATMYRTGKDLPQDKKKAFELYQKAAAQDYATAQYNLGVMYLEGKDI 500
Query: 211 PECLTKLNAKRVSAAKKARANLESNLMN--------PVEKAK--EQFEVAAQAGC 255
P+ K AA++ + NL N P +K K + F+ AA+ G
Sbjct: 501 PKDTAKAVLFFQKAAEQGDPEAQFNLANMYVKGEGIPQDKTKAFQLFQKAAEQGL 555
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 33 NKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSNTH-ARYW 91
N +A L+AK +S KE IP K KE F+ +A + N A+Y
Sbjct: 51 NAEAQFLLAKKYSLGKE---------------IP--KNMKEAFQWYQKAADQNYQKAQYN 93
Query: 92 LSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEK 151
L+ ++ K L + AAN G AQY++G + +++++A +I K
Sbjct: 94 LASMYEYGEYLPQDKKKAFELYLKAANQGLSAAQYKIGTMYYEGSAVPKNNRKAIEWIRK 153
Query: 152 AVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
A D A Y LG +Y TG+ + +D A + + +A +G A G++ P
Sbjct: 154 AADNGLGQAEYALGVLYYTGEILPQDKNKAAYFYKKAEIQGDDTTEYALAITYYSGIKAP 213
Query: 212 ECLTK 216
+ +TK
Sbjct: 214 QDITK 218
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A+L AA G+ +AQ+ L + + + ++ ++AF + +KA DQ + A Y L ++Y
Sbjct: 41 AVLFKAAQRGNAEAQFLLAKKYSLGKEIPKNMKEAFQWYQKAADQNYQKAQYNLASMYEY 100
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G+ + +D A + +A+ +G + A G++ G VP K N K + +KA
Sbjct: 101 GEYLPQDKKKAFELYLKAANQGLSAAQYKIGTMYYEGSAVP----KNNRKAIEWIRKAAD 156
Query: 231 N 231
N
Sbjct: 157 N 157
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 17/177 (9%)
Query: 28 WLHSRNKKAMELIAK----GWSALKEVDRVIDY----CELNDRRLIPLLKTAKENFELAL 79
+L KKA EL K G SA + + Y N+R+ I ++ A
Sbjct: 103 YLPQDKKKAFELYLKAANQGLSAAQYKIGTMYYEGSAVPKNNRKAIEWIRKA-------- 154
Query: 80 EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
ADN A Y L L+ + K A A GD +Y L
Sbjct: 155 -ADNGLGQAEYALGVLYYTGEILPQDKNKAAYFYKKAEIQGDDTTEYALAITYYSGIKAP 213
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
Q +AF +K+ +Q + A L +Y TG+ + ++ A AL F +A+++ +A A
Sbjct: 214 QDITKAFQLFQKSANQGNAEAQNGLAVLYWTGEGISQNKAQALQLFQKAADQDNAEA 270
>gi|163794175|ref|ZP_02188147.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
gi|159180343|gb|EDP64864.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
Length = 380
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ +G + + Q +A + KA +Q H + Y LG +Y+ GD V
Sbjct: 193 AAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGHASSQYNLGEMYVNGDGVT 252
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+GHAG+ G + RG V + + AA++ A ++N
Sbjct: 253 QDYAEAVKWYRKAAEQGHAGSQFNIGYMYKRGEGVTQDYAEAVKWYRKAAEQGHAGAQNN 312
Query: 236 L 236
L
Sbjct: 313 L 313
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ +G + + Q +A + KA +Q A + +G +Y GD V
Sbjct: 85 AAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVT 144
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A AL + +A+E+G A A G + RG V + + AA++ RA+ + N
Sbjct: 145 QDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFN 204
Query: 236 L 236
+
Sbjct: 205 I 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ +G + + Q +A + KA +Q A + +G +Y GD V
Sbjct: 157 AAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVT 216
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A AL + +A+E+GHA + G + + G V + + AA++ A + N
Sbjct: 217 QDYAEALKWYRKAAEQGHASSQYNLGEMYVNGDGVTQDYAEAVKWYRKAAEQGHAGSQFN 276
Query: 236 L 236
+
Sbjct: 277 I 277
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G +QY LG + V D V D +A + KA +Q H G+ + +G +Y G+ V
Sbjct: 229 AAEQGHASSQYNLG-EMYVNGDGVTQDYAEAVKWYRKAAEQGHAGSQFNIGYMYKRGEGV 287
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A A+ + +A+E+GHAGA G + G V
Sbjct: 288 TQDYAEAVKWYRKAAEQGHAGAQNNLGLMYYNGKGV 323
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G DAQ+ +G + + Q +A + KA +Q A + +G +Y GD V +
Sbjct: 50 AEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQ 109
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A AL + +A+E+G A A G + RG V + + AA++ RA+ + N+
Sbjct: 110 DYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNI 169
>gi|344924997|ref|ZP_08778458.1| hypothetical protein COdytL_10171 [Candidatus Odyssella
thessalonicensis L13]
Length = 529
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 75 FELALEADNSNTHARYWLSK------------LHLKYH----VPGACKAMGAALLVDAAN 118
+EL + +THA +W + L L Y VP + + A L +AAN
Sbjct: 304 YELGIGVPQDDTHAVHWYQQAANQGYAWAQFYLGLCYEHGECVPQSAE-QAAYWLQEAAN 362
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
DAQ+ LG N + D QA Y +KA +Q H A LG Y G+ V +D
Sbjct: 363 QVHADAQFNLGIYYEEGNGVTEDDAQAAYLFQKAANQGHAEAQNNLGFCYTYGEGVSQDP 422
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
A A++ + +A+ +G+A A G+ G VP+ T+ AA + A+ + NL
Sbjct: 423 AQAVYWYQQAANQGYARAQKKLGTCYEHGQGVPQDDTQTVYWYQQAANQGYADGQFNL 480
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A A L AAN G +AQ LG Q QA Y+ ++A +Q + A LGT
Sbjct: 387 AQAAYLFQKAANQGHAEAQNNLGFCYTYGEGVSQDPAQAVYWYQQAANQGYARAQKKLGT 446
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
Y G V +D ++ + +A+ +G+A G G VP+
Sbjct: 447 CYEHGQGVPQDDTQTVYWYQQAANQGYADGQFNLGRCYRNGKGVPQ 492
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD Q LG + Q D A ++ ++A +Q + A + LG Y G+CV
Sbjct: 288 AAEQGDARMQLSLGYCYELGIGVPQDDTHAVHWYQQAANQGYAWAQFYLGLCYEHGECVP 347
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A + A+ + HA A G G V E + AA + A ++N
Sbjct: 348 QSAEQAAYWLQEAANQVHADAQFNLGIYYEEGNGVTEDDAQAAYLFQKAANQGHAEAQNN 407
Query: 236 L 236
L
Sbjct: 408 L 408
>gi|387125689|ref|YP_006291571.1| hypothetical protein ABTJ_03728 [Acinetobacter baumannii MDR-TJ]
gi|385880181|gb|AFI97276.1| TPR repeat-containing protein [Acinetobacter baumannii MDR-TJ]
Length = 230
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 117 ANMGDPDAQYELGCRLRV-ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G P AQY LG L E V++ +QAF ++ A GA Y LG +Y TG V+
Sbjct: 34 AQQGQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVE 93
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD+ A F +A++KGHA A G L +RG + + AA++ E N
Sbjct: 94 KDMKRAFEYFAKAADKGHAKAQYNLGVLYVRGEGTAQNYEQAFEWYSRAAEQGYPPAEYN 153
Query: 236 LMNPVEKA 243
L + +K
Sbjct: 154 LAHLYKKG 161
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A G A+Y LG + ++AF Y KA D+ H A Y LG +Y+ G+
Sbjct: 67 LTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGVLYVRGE 126
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
++ A + RA+E+G+ A L +G V + + AA+ ++
Sbjct: 127 GTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAEHNESDA 186
Query: 233 ESNLMN--------P--VEKAKEQFEVAAQAGCNLGLRWLQRIE 266
+ NL P ++ AK+ F+ AA AG + L+ +E
Sbjct: 187 QYNLAQMYLNGEGMPKNLQLAKKWFQQAADAGDSDAKEMLKSLE 230
>gi|392390039|ref|YP_006426642.1| Sel1 repeat protein [Ornithobacterium rhinotracheale DSM 15997]
gi|390521117|gb|AFL96848.1| Sel1 repeat protein [Ornithobacterium rhinotracheale DSM 15997]
Length = 257
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 73 ENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRL 132
E +E L+A+ + A++ LS+++ + + A GD AQ+ LG +
Sbjct: 50 EKYEEVLDAEQGDADAQHNLSEMNDNEEGTEQDRQKAFEWVQKIAEQGDASAQFNLGV-M 108
Query: 133 RVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
++ D Q D Q+A +++KA +Q A Y LG +Y G ++D A+ + +A+E+
Sbjct: 109 YIKGDGTQQDYQKAKEWLQKAAEQGDADAQYNLGLMYNKGTGTQQDYEKAIEWYQKAAEQ 168
Query: 192 GHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK----KARANLESNLMN------PVE 241
GHA A G + G V + K AA+ KA+ NL S N +
Sbjct: 169 GHAKAQFNLGYMYDNGEGVKQDYHKAFEWYQKAAEQGFAKAQYNLGSMYYNGKGVRQDYQ 228
Query: 242 KAKEQFEVAAQAGCNLGLRWLQRIEE 267
KAKE F A G LG + ++E
Sbjct: 229 KAKEYFGKACDNGLQLGCDKFKELKE 254
>gi|160942306|ref|ZP_02089615.1| hypothetical protein CLOBOL_07192 [Clostridium bolteae ATCC
BAA-613]
gi|158434863|gb|EDP12630.1| hypothetical protein CLOBOL_07192 [Clostridium bolteae ATCC
BAA-613]
Length = 973
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G+ +AQY LG +L +EN +QA ++EKA + H A Y L +YL G+ V
Sbjct: 678 AAQLGNMNAQYALG-KLWLENG-TGDQKQAVAWLEKAAEAEHASAQYALANIYLAGEAVA 735
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
KD+ A F RA+++GH AA G L+G
Sbjct: 736 KDVTKATELFTRAAKQGHDYAAYQLGKQFLQG 767
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
E A EA++++ A+Y L+ ++L L AA G A Y+LG +
Sbjct: 709 LEKAAEAEHAS--AQYALANIYLAGEAVAKDVTKATELFTRAAKQGHDYAAYQLGKQFLQ 766
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
+ + + A +++++ + A Y LG +YL G+ V+KDI +A+ +++ + +A
Sbjct: 767 GEETEKDVEAAIKWLKQSAAANNQYAQYSLGKLYLDGEKVEKDIRTAITYLKKSAAQNNA 826
Query: 195 GAAIAYGSLLLRGVQV 210
A G L G V
Sbjct: 827 FAEYRLGRFYLLGEDV 842
>gi|424737685|ref|ZP_18166135.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZB2]
gi|422948324|gb|EKU42707.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZB2]
Length = 638
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 59 LNDRRLIPLLKTAKENFE-----LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALL 113
LN + + LL ++N L L ADN + A + L +L+ Y + KAM +
Sbjct: 394 LNAQYCLGLLYEKEQNLVSAEKWLLLAADNGHISAGFELGRLY-AYQLEDPVKAM--SYF 450
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA G DAQYELG L + ++A + A DQ H A Y LG +Y G
Sbjct: 451 RTAAEKGYADAQYELGLLLTSGTGVPINYKEAVKWWRAATDQSHIQAEYQLGLLYEQGLG 510
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
V ++ A C+ A+ +GHAGA G+L +G V + T+
Sbjct: 511 VALNLEEARRCYRLAATQGHAGAQYQLGNLFDKGKGVEQDYTE 553
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY+LG VE DY ++ + +IE+A Q H A Y L +++ G
Sbjct: 525 AATQGHAGAQYQLGNLFDKGKGVEQDYTEAAK----WIEQAASQGHMKAQYQLAQMHIHG 580
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V KD A A + ++ +GH A G L +G V +
Sbjct: 581 QGVPKDFAKAAQLYRLSANQGHQKAQFQLGMLYKKGHGVAQ 621
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY LG Q+ ++A + A Q H A + L +Y TG +
Sbjct: 316 AALTGDASAQYNLGYMHLKGRGIPQNQEEAAKWFHMAALQDHVNAEFQLAMLYNTGQGMT 375
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC----LTKLNAKRVSAAKKARAN 231
KD AL F A+ KGH A G L + + L + +SA +
Sbjct: 376 KDHIEALKWFKLAAHKGHLNAQYCLGLLYEKEQNLVSAEKWLLLAADNGHISAGFELGRL 435
Query: 232 LESNLMNPVEKAKEQFEVAAQAG 254
L +PV KA F AA+ G
Sbjct: 436 YAYQLEDPV-KAMSYFRTAAEKG 457
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++ + DAQY LG Q+ +A + A +Q + A LG +Y G V+
Sbjct: 244 AADLENADAQYNLGVLYNQGLGLSQNFNEAAKWYTLAANQGNTSAQNNLGFLYHNGTGVE 303
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++ A+ F A+ G A A G + L+G +P+
Sbjct: 304 QNYDKAVAYFKMAALTGDASAQYNLGYMHLKGRGIPQ 340
>gi|299541678|ref|ZP_07052008.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZC1]
gi|298725773|gb|EFI66407.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZC1]
Length = 638
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 59 LNDRRLIPLLKTAKENFE-----LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALL 113
LN + + LL ++N L L ADN + A + L +L+ Y + KAM +
Sbjct: 394 LNAQYCLGLLYEKEQNLVSAEKWLLLAADNGHISAGFELGRLY-AYQLEDPVKAM--SYF 450
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA G DAQYELG L + ++A + A DQ H A Y LG +Y G
Sbjct: 451 RTAAEKGYADAQYELGLLLTSGTGVPINYKEAVKWWRAATDQSHIQAEYQLGLLYEQGLG 510
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
V ++ A C+ A+ +GHAGA G+L +G V + T+
Sbjct: 511 VALNLEEARRCYRLAATQGHAGAQYQLGNLFDKGKGVEQDYTE 553
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY+LG VE DY ++ + +IE+A Q H A Y L +++ G
Sbjct: 525 AATQGHAGAQYQLGNLFDKGKGVEQDYTEAAK----WIEQAASQGHMKAQYQLAQMHIHG 580
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V KD A A + ++ +GH A G L +G V +
Sbjct: 581 QGVPKDFAKAAQLYRLSANQGHQKAQFQLGMLYKKGHGVAQ 621
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY LG Q+ ++A + A Q H A + L +Y TG +
Sbjct: 316 AALTGDASAQYNLGYMHLKGCGIPQNQEEAAKWFHMAALQDHVNAEFQLAMLYNTGQGMT 375
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC----LTKLNAKRVSAAKKARAN 231
KD AL F A+ KGH A G L + + L + +SA +
Sbjct: 376 KDHIEALKWFKLAAHKGHLNAQYCLGLLYEKEQNLVSAEKWLLLAADNGHISAGFELGRL 435
Query: 232 LESNLMNPVEKAKEQFEVAAQAG 254
L +PV KA F AA+ G
Sbjct: 436 YAYQLEDPV-KAMSYFRTAAEKG 457
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++ + DAQY LG Q+ +A + A +Q + A LG +Y G V+
Sbjct: 244 AADLENADAQYNLGVLYNQGLGLSQNFNEAAKWYTLAANQGNTSAQNNLGFLYHNGTGVE 303
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++ A+ F A+ G A A G + L+G +P+
Sbjct: 304 QNYDKAVAYFKMAALTGDASAQYNLGYMHLKGCGIPQ 340
>gi|373115799|ref|ZP_09529963.1| hypothetical protein HMPREF0995_00799 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371669957|gb|EHO35048.1| hypothetical protein HMPREF0995_00799 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 649
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 59 LNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDA 116
L++R+ + L E E A+ +THA++ + + + +P + KA L A
Sbjct: 398 LDERQPLELRDQGVERLEWL--AEQRDTHAQFVMGQFYRDGPLLIPDSQKAKRWFTL--A 453
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G P+AQY LG L E+ V ++ ++ +A + A Y LG YLTG+ K
Sbjct: 454 AEQGMPEAQYALGKLLLSEDPEVHDPEEGLRWLRRAAQEGSTYAAYRLGKEYLTGEHAPK 513
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+A+ CF ++E+G+ A G L L G +P
Sbjct: 514 SGENAVRCFRSSAEQGNPFAQYMLGKLYLDGEALP 548
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 64 LIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPD 123
LIP + AK F LA A+ A+Y L KL L G L AA G
Sbjct: 439 LIPDSQKAKRWFTLA--AEQGMPEAQYALGKLLLSEDPEVHDPEEGLRWLRRAAQEGSTY 496
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
A Y LG +S + A + +Q +P A Y+LG +YL G+ + +D A+
Sbjct: 497 AAYRLGKEYLTGEHAPKSGENAVRCFRSSAEQGNPFAQYMLGKLYLDGEALPRDQEQAVQ 556
Query: 184 CFHRASEKGH 193
F R++ +G+
Sbjct: 557 WFRRSAAQGN 566
>gi|239503112|ref|ZP_04662422.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB900]
gi|421679060|ref|ZP_16118940.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
gi|410391751|gb|EKP44117.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
Length = 230
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 117 ANMGDPDAQYELGCRLRV-ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G P AQY LG L E V++ +QAF ++ A GA Y LG +Y TG V+
Sbjct: 34 AQQGQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVE 93
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD+ A F +A++KGHA A G L RG + + AA++ E N
Sbjct: 94 KDMKRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYN 153
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEE 267
L + +K + QA L+W + E
Sbjct: 154 LAHLYKKGHGVSQSNEQA-----LKWYTKAAE 180
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 67 LLKTAKENFELALEAD-NSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPD 123
++K ++ F+ AD N + A+Y L ++ G K M A AA+ G
Sbjct: 56 VVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFT--GTGVEKDMKRAFEYFAKAADKGHAK 113
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY LG Q+ +QAF + +A +Q +P A Y L +Y G V + AL
Sbjct: 114 AQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVSQSNEQALK 173
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
+ +A+E + A + L G P+ L
Sbjct: 174 WYTKAAEHNESDAQYNLAQMYLNGEGTPKNL 204
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A G A+Y LG + ++AF Y KA D+ H A Y LG +Y G+
Sbjct: 67 LTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGVLYDRGE 126
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
++ A + RA+E+G+ A L +G V + + AA+ ++
Sbjct: 127 GTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVSQSNEQALKWYTKAAEHNESDA 186
Query: 233 ESNLM--------NP--VEKAKEQFEVAAQAG 254
+ NL P ++ AK+ F+ AA AG
Sbjct: 187 QYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 218
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 69 KTAKENFE-LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
K K FE A AD + A+Y L L+ + AA G P A+Y
Sbjct: 94 KDMKRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYN 153
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
L + + QS++QA + KA + A Y L +YL G+ K++ A F +
Sbjct: 154 LAHLYKKGHGVSQSNEQALKWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQ 213
Query: 188 ASEKGHAGA 196
A++ G + A
Sbjct: 214 AADAGDSDA 222
>gi|444428802|ref|ZP_21224104.1| hypothetical protein B878_22457 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444237967|gb|ELU49604.1| hypothetical protein B878_22457 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 370
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 42 KGWSALKEVDRVIDYCELNDRRLIPLLKTAKEN--FELAL------EADNSNTHARYWLS 93
KG+ A + D Y E PL + + N F LAL + A YW
Sbjct: 23 KGFDAYNQGDFKTAYSEW-----FPLAEQGEANAQFNLALMYLYGQGITQDDKQAVYWYR 77
Query: 94 KLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAV 153
K AA GD AQ LG Q D+QAFY+ KA
Sbjct: 78 K---------------------AAEQGDAIAQRNLGVMYSHGRGVAQDDKQAFYWFHKAA 116
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
+Q P A Y+LG +YL G V +D A++ F +A+ +G + G + G V +
Sbjct: 117 EQGLPKAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQD 176
Query: 214 LTKLNAKRVSAAKKARANLESNL 236
+ AA++ A +SNL
Sbjct: 177 DKQAVYWYRKAAEQGLARAQSNL 199
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQY LG +Q D QA Y+ KA Q + Y LG +Y G V
Sbjct: 115 AAEQGLPKAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVT 174
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A++ + +A+E+G A A G + G V +
Sbjct: 175 QDDKQAVYWYRKAAEQGLARAQSNLGVMYSHGRGVAQ 211
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ LG N Q D+QA Y+ KA +Q A LG +YL G +
Sbjct: 223 AAEQGDAIAQHNLGFM----NQNGQDDKQAVYWYRKAAEQGLARAQSNLGFMYLHGQGLI 278
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP----ECLTKLNAKRVSAAKKARAN 231
+D A++ F +A+++G A A G + L G V + L+ R + K + N
Sbjct: 279 QDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQDNAQAYMWLSLARHNGYKNTKEN 338
Query: 232 LES--NLMNPVE--KAKEQFEV 249
+ LM P + +A+E F+V
Sbjct: 339 FNTLNKLMTPSDIIEAQEAFKV 360
>gi|119947297|ref|YP_944977.1| Sel1-like repeat-containing serine/threonine protein kinase
[Psychromonas ingrahamii 37]
gi|119865901|gb|ABM05378.1| Tyrosine protein kinase:Serine/threonine protein kinase:Sel1-like
repeat protein [Psychromonas ingrahamii 37]
Length = 448
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQY +G + +Q +QA + KA +Q H GA Y +G +Y G V
Sbjct: 295 AAKQGNADAQYNMGLMYNNGHGVIQDYKQALQWYNKAAEQQHAGAQYNMGMMYDYGQGVS 354
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A +H+A+E+GHA A G + G
Sbjct: 355 QDYKQAADWYHKAAEQGHANAQYYLGMMYENG 386
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG +Q +QA + KA +Q H GA Y LG +Y V+
Sbjct: 79 AAEQGHVGAQYYLGLMYNNGQGVLQDYKQAAQWYRKAAEQRHTGAQYYLGLMYDNAQGVR 138
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A + + +A+E+ +A A + G G VP+
Sbjct: 139 QDKKQATYWYQKAAEQNYANAQYSMGERYAIGNTVPQ 175
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
QY+LG QS +QA + KA +Q H A Y LG +Y +G V + A +
Sbjct: 196 QYDLGLMYSSGQGVPQSSEQAAQWYHKAAEQEHAEAQYTLGLIYTSGYGVTQSYKQATYW 255
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+++A+E+G++ A G + G + T+ AAK+ A+ + N+
Sbjct: 256 YNKAAEQGYSDAQYNMGLMYNSGNNGFKNYTEATRWYRKAAKQGNADAQYNM 307
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 117 ANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
A GD +AQY LG L + DY ++A + +A +Q H GA Y LG +Y G
Sbjct: 44 AQFGDANAQYNLGTIYANGLGIPQDY----KEAALWSRRAAEQGHVGAQYYLGLMYNNGQ 99
Query: 173 CVKKDIASALWCFHRASEKGHAGA 196
V +D A + +A+E+ H GA
Sbjct: 100 GVLQDYKQAAQWYRKAAEQRHTGA 123
>gi|184156430|ref|YP_001844769.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ACICU]
gi|260557655|ref|ZP_05829869.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|332875557|ref|ZP_08443370.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|417548213|ref|ZP_12199294.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|417567536|ref|ZP_12218408.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|417576511|ref|ZP_12227356.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|421631487|ref|ZP_16072156.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|445450083|ref|ZP_21444418.1| Sel1 repeat protein [Acinetobacter baumannii WC-A-92]
gi|445491657|ref|ZP_21459888.1| Sel1 repeat protein [Acinetobacter baumannii AA-014]
gi|183208024|gb|ACC55422.1| TPR repeat, SEL1 subfamily protein [Acinetobacter baumannii ACICU]
gi|193075991|gb|ABO10574.2| putative signal peptide [Acinetobacter baumannii ATCC 17978]
gi|260408828|gb|EEX02132.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|332736260|gb|EGJ67274.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|395553208|gb|EJG19216.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|395569732|gb|EJG30394.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|400388512|gb|EJP51584.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|408692759|gb|EKL38373.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|444756066|gb|ELW80625.1| Sel1 repeat protein [Acinetobacter baumannii WC-A-92]
gi|444764195|gb|ELW88518.1| Sel1 repeat protein [Acinetobacter baumannii AA-014]
gi|452950078|gb|EME55543.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MSP4-16]
Length = 230
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 117 ANMGDPDAQYELGCRLRV-ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G P AQY LG L E V++ +QAF ++ A GA Y LG +Y TG V+
Sbjct: 34 AQQGQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVE 93
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD+ A F +A++KGHA A G L RG + + AA++ E N
Sbjct: 94 KDMKRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYN 153
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEE 267
L + +K + QA L+W + E
Sbjct: 154 LAHLYKKGHGVAQSDEQA-----LKWYTKAAE 180
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 67 LLKTAKENFELALEAD-NSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPD 123
++K ++ F+ AD N + A+Y L ++ G K M A AA+ G
Sbjct: 56 VVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFT--GTGVEKDMKRAFEYFAKAADKGHAK 113
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY LG Q+ +QAF + +A +Q +P A Y L +Y G V + AL
Sbjct: 114 AQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALK 173
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
+ +A+E + A + L G P+ L
Sbjct: 174 WYTKAAEHNESDAQYNLAQMYLNGEGTPKNL 204
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A G A+Y LG + ++AF Y KA D+ H A Y LG +Y G+
Sbjct: 67 LTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGVLYDRGE 126
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
++ A + RA+E+G+ A L +G V + + AA+ ++
Sbjct: 127 GTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAEHNESDA 186
Query: 233 ESNLM--------NP--VEKAKEQFEVAAQAG 254
+ NL P ++ AK+ F+ AA AG
Sbjct: 187 QYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 218
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 69 KTAKENFE-LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
K K FE A AD + A+Y L L+ + AA G P A+Y
Sbjct: 94 KDMKRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYN 153
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
L + + QSD+QA + KA + A Y L +YL G+ K++ A F +
Sbjct: 154 LAHLYKKGHGVAQSDEQALKWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQ 213
Query: 188 ASEKGHAGA 196
A++ G + A
Sbjct: 214 AADAGDSDA 222
>gi|288573899|ref|ZP_06392256.1| Sel1 domain protein repeat-containing protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569640|gb|EFC91197.1| Sel1 domain protein repeat-containing protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 854
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P+AQY L R + + ++ +++KA + P A Y LGT+Y GD +
Sbjct: 333 AAEQGIPEAQYNLSVIYRKGSSLPKDLGKSLLWLKKAAELGLPEAQYSLGTLYREGDEIP 392
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP----ECLTKLNAKRVSAAKKARAN 231
+D++ A F +AS +G+A + A G + LRG VP E + L A + A+ N
Sbjct: 393 RDLSKAAELFRKASNRGNAESQCALGLMYLRGAGVPRDEKEAMEHLIASGEAGYPSAQYN 452
Query: 232 L-------ESNLMNPVEKAKEQFEVAAQAG-----CNLGLRW 261
L E+ + E A+ F AA G CNLG+++
Sbjct: 453 LGLLYSRGEAVPRDTAEAAR-WFRKAALQGHPGAQCNLGVQY 493
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 25/168 (14%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL------LVDAANMGDPDAQYELGC 130
L + +D N A+Y L +L C+ G + AA G AQY L
Sbjct: 261 LKMASDRGNPEAQYLLGQL---------CRQQGGSFKEAANWFGLAARQGHGPAQYALAT 311
Query: 131 ----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
+ VE D S A +Y +A +Q P A Y L +Y G + KD+ +L
Sbjct: 312 LYERGIGVEKDPTLS---ALWY-RRAAEQGIPEAQYNLSVIYRKGSSLPKDLGKSLLWLK 367
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
+A+E G A + G+L G ++P L+K A + R N ES
Sbjct: 368 KAAELGLPEAQYSLGTLYREGDEIPRDLSK--AAELFRKASNRGNAES 413
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL-TGDCV 174
AA G AQ ELG R QSD A + + +Q + A Y L +YL G +
Sbjct: 692 AAQGGYAPAQCELGIRYITGEGLPQSDPAALRWFSLSAEQGYVPAQYNLAVLYLYGGPYL 751
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D +SA F RA+++G+ A G L RG V
Sbjct: 752 SPDESSAFHWFSRAAKEGYRDAQFYLGCLYERGNAV 787
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALL--VDAANMGDPDAQYELGCRLRVEND 137
A+ A+Y LS ++ K +P K +G +LL AA +G P+AQY LG R E D
Sbjct: 334 AEQGIPEAQYNLSVIYRKGSSLP---KDLGKSLLWLKKAAELGLPEAQYSLGTLYR-EGD 389
Query: 138 YVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ D +A KA ++ + + LG +YL G V +D A+ + E G+ A
Sbjct: 390 EIPRDLSKAAELFRKASNRGNAESQCALGLMYLRGAGVPRDEKEAMEHLIASGEAGYPSA 449
Query: 197 AIAYGSLLLRGVQVP 211
G L RG VP
Sbjct: 450 QYNLGLLYSRGEAVP 464
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AA G D QY LG R + +A Y++EKA Q H A LG + + D
Sbjct: 88 EAAKGGSADGQYNLGLMFRDGEGTPKDSYKATYWLEKAASQGHQTAQIALGMMAMNPDEG 147
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPE 212
+ F A+E+G+ G LL RG++ E
Sbjct: 148 EPRYEDGAKWFAMAAEQGNISGCYNLGRLLSLGRGIEKDE 187
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 14/165 (8%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A G DA Y LGC + + A Y + +A A+ LG Y G
Sbjct: 545 LLEKAIEAGSWDAPYSLGCLFAGDYGGPVREISALYRLYQAASIGDRRAMLRLGLAYDEG 604
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V D A+ +A+E+G A G++ L+G + + + +AK+
Sbjct: 605 KLVAPDKMEAVKWIRKAAEQGSDKAQFTLGAMYLKGDGLVKSHNAAMSWFCESAKQGNLQ 664
Query: 232 LESNLMNPVEKAKEQ---------FEVAAQAG-----CNLGLRWL 262
+ NL + +K++ E AAQ G C LG+R++
Sbjct: 665 AQYNLGLCLWNSKDEELRSSAIMWMERAAQGGYAPAQCELGIRYI 709
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELG-CRLRVEND 137
A+ + A++ L ++LK G K+ AA+ ++A G+ AQY LG C +++
Sbjct: 622 AEQGSDKAQFTLGAMYLKGD--GLVKSHNAAMSWFCESAKQGNLQAQYNLGLCLWNSKDE 679
Query: 138 YVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
++S A ++E+A + A LG Y+TG+ + + +AL F ++E+G+ A
Sbjct: 680 ELRS--SAIMWMERAAQGGYAPAQCELGIRYITGEGLPQSDPAALRWFSLSAEQGYVPAQ 737
Query: 198 IAYGSLLLRG 207
L L G
Sbjct: 738 YNLAVLYLYG 747
>gi|333367586|ref|ZP_08459838.1| TPR repeat protein [Psychrobacter sp. 1501(2011)]
gi|332978563|gb|EGK15270.1| TPR repeat protein [Psychrobacter sp. 1501(2011)]
Length = 310
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
AN GD +AQ+ELG + Q ++A Y+ K+ Q H A Y +G +Y TGD V +
Sbjct: 37 ANKGDSEAQFELGVIYDNGDQLPQDLKKAAYWYTKSAQQGHVDAQYNIGDMYRTGDGVTQ 96
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A+ A+++G A G L + G+ VP+ K +A + A ++NL
Sbjct: 97 DYVQAVQWLSNAADQGSIEAQNDLGYLYMEGIGVPQDYRKAFELLSQSANQGYAYAQNNL 156
Query: 237 MNPVEKA 243
EK
Sbjct: 157 GTLYEKG 163
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 27/144 (18%)
Query: 75 FELALEADNSNT------HARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
FEL + DN + A YW +K +A G DAQY +
Sbjct: 46 FELGVIYDNGDQLPQDLKKAAYWYTK---------------------SAQQGHVDAQYNI 84
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G R + Q QA ++ A DQ A LG +Y+ G V +D A ++
Sbjct: 85 GDMYRTGDGVTQDYVQAVQWLSNAADQGSIEAQNDLGYLYMEGIGVPQDYRKAFELLSQS 144
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPE 212
+ +G+A A G+L +G+ VP+
Sbjct: 145 ANQGYAYAQNNLGTLYEKGLGVPQ 168
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
A+ LG + + Q Q+A + +KA DQ + AL LG +Y G +KD A AL
Sbjct: 188 AELNLGSLYFMGHGTKQDYQKAAKWYQKAADQGYGDALSNLGIMYQHGLYFEKDYAKALD 247
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
F A+++G + G+L G+ VP L
Sbjct: 248 MFQAAAQQGSSMGKYNLGNLYQLGLGVPRNL 278
>gi|388601080|ref|ZP_10159476.1| hypothetical protein VcamD_14460 [Vibrio campbellii DS40M4]
Length = 370
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 42 KGWSALKEVDRVIDYCELNDRRLIPLLKTAKEN--FELAL------EADNSNTHARYWLS 93
KG+ A + D Y E PL + + N F LAL + A YW
Sbjct: 23 KGFDAYNQGDFKTAYSEW-----FPLAEQGEANAQFNLALMYLYGQGITQDDKQAVYWYR 77
Query: 94 KLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAV 153
K AA GD AQ LG Q D+QAFY+ KA
Sbjct: 78 K---------------------AAEQGDAIAQRNLGFMYLRGQGVTQDDKQAFYWFHKAA 116
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
+Q P A Y+LG +YL G V +D A++ F +A+ +G + G + G V +
Sbjct: 117 EQGLPKAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQD 176
Query: 214 LTKLNAKRVSAAKKARANLESNL 236
+ AA++ A +SNL
Sbjct: 177 DKQAVYWYRKAAEQGLARAQSNL 199
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQY LG +Q D QA Y+ KA Q + Y LG +Y G V
Sbjct: 115 AAEQGLPKAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVT 174
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ + +A+E+G A A G + G V + + AA++ A + N
Sbjct: 175 QDDKQAVYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQHN 234
Query: 236 L--MNP-----------VEKAKEQFEVAAQAGCNLGLRWL 262
L MN KA EQ A+A NLGL +L
Sbjct: 235 LGFMNQNGQDYKQAVYWYRKAAEQ--GLARAQSNLGLMYL 272
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 34/78 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG +Q D+QA Y+ KA Q A + LG VYL G V
Sbjct: 255 AAEQGLARAQSNLGLMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVT 314
Query: 176 KDIASALWCFHRASEKGH 193
+D A A A GH
Sbjct: 315 QDNAQAYMWLSLARHNGH 332
>gi|398380209|ref|ZP_10538327.1| TPR repeat-containing protein [Rhizobium sp. AP16]
gi|397721525|gb|EJK82073.1| TPR repeat-containing protein [Rhizobium sp. AP16]
Length = 530
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G PDAQY LG QA + KA DQ G Y LG +Y G V
Sbjct: 366 SAEQGHPDAQYALGYIYDKGQGTAPDKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVP 425
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT-------KLNAKRVSAAKKA 228
KD A F +A+E+G+A A GS+ G VP+ + K + + A+ +
Sbjct: 426 KDYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDIGQATKWFRKAAGQGLPEAQHS 485
Query: 229 RANLESNLMNPVEKAKEQ 246
+ + +N NP++ A +
Sbjct: 486 LSYMAANGENPLKSASPE 503
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVD----AANMGDPDAQYELGCRLRVEN 136
AD A+Y L ++ K G A +L +D +A+ GDP +Y LG
Sbjct: 187 ADQGRADAQYALGYMYDK----GLGTAADQSLAIDWYQKSADQGDPQGEYALGYAYTNGR 242
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
Q D QA+ + +K+ +Q A Y LG + G V +D AL + +A+++G A A
Sbjct: 243 GVDQDDGQAYSWYKKSAEQGRADAQYGLGYSFANGLGVPRDYKLALQWYRKAADQGRADA 302
Query: 197 AIAYGSLLLRGVQVP 211
A G L G VP
Sbjct: 303 QYAVGYLYANGKGVP 317
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD + +Y L ++D +A + K+ +Q HP A Y LG +Y G
Sbjct: 330 AAAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTA 389
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D A + +A+++G AG A G L G VP+
Sbjct: 390 PDKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPK 426
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
V A G+ AQY LG R D QA + KA Q + A Y L +Y G
Sbjct: 40 VQFAKDGNAAAQYGLGYRYAKGQGVEHDDAQAVQWYRKAAAQGNVQAEYALAYMYSNGLG 99
Query: 174 VKKDIASALWCFHRASEKGHAGA--AIAYGSLLLRGVQV 210
V KD+ A + +A+E G+A A AI Y RG V
Sbjct: 100 VDKDLKEANTWYRKAAEHGYADAQYAIGYSYANGRGKDV 138
>gi|392394666|ref|YP_006431268.1| hypothetical protein Desde_3184 [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525744|gb|AFM01475.1| TPR repeat-containing protein [Desulfitobacterium dehalogenans ATCC
51507]
Length = 999
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 38 ELIAKGWSALKEVDRVIDYCE-------LNDRRLIPLLKTAKENFE----------LALE 80
+++ G K + R IDY E +N + L+ + EN L
Sbjct: 649 QMLYTGTGTEKNIPRAIDYLEKSANTGNVNAQYLLAKIYLETENAPPDKIRKALTLLEKA 708
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A NT A+Y L+K+ ++ HV A LL +A + AQY LG +L VE V
Sbjct: 709 AGGGNTQAQYALAKILIQGKHVEKDI-ARALTLLTSSAEQKNQFAQYALG-KLYVEGKVV 766
Query: 140 QSDQQAFYYIEKA-VDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
D A + KA V+Q + A Y LG ++L G+ V KD+A+ L + E+G+ A
Sbjct: 767 PKDVVAGLELLKASVEQGNQFAQYTLGKLHLEGEVVPKDVAAGLELIKASVEQGNQFAQY 826
Query: 199 AYGSLLLRGVQVP-ECLTKLNAKRVSAAKK 227
G L L G VP + + +N + SA +K
Sbjct: 827 TLGKLYLEGEVVPKDVVAGVNLLKASAEQK 856
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N A+Y L KL+++ V G LL + G+ AQY LG +L +E
Sbjct: 741 LTSSAEQKNQFAQYALGKLYVEGKVVPKDVVAGLELLKASVEQGNQFAQYTLG-KLHLEG 799
Query: 137 DYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ V D A I+ +V+Q + A Y LG +YL G+ V KD+ + + ++E+ +
Sbjct: 800 EVVPKDVAAGLELIKASVEQGNQFAQYTLGKLYLEGEVVPKDVVAGVNLLKASAEQKNQF 859
Query: 196 AAIAYGSLLLRGVQVPECL 214
A G L + G VP+ +
Sbjct: 860 AQYRLGKLYIEGEDVPKNV 878
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L + N A+Y L KLHL+ V A G L+ + G+ AQY LG +L +E
Sbjct: 777 LKASVEQGNQFAQYTLGKLHLEGEVVPKDVAAGLELIKASVEQGNQFAQYTLG-KLYLEG 835
Query: 137 DYVQSDQQAFYYIEKA-VDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ V D A + KA +Q + A Y LG +Y+ G+ V K++ + + ++E+G+
Sbjct: 836 EVVPKDVVAGVNLLKASAEQKNQFAQYRLGKLYIEGEDVPKNVQVGIQLLNESAEQGNQF 895
Query: 196 AAIAYGSLLLRGVQVP 211
A G + L G VP
Sbjct: 896 AQFKLGIVYLSGKDVP 911
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 82 DNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS 141
+ N A+Y L KL+L+ V G LL +A + AQY LG +L +E + V
Sbjct: 818 EQGNQFAQYTLGKLYLEGEVVPKDVVAGVNLLKASAEQKNQFAQYRLG-KLYIEGEDVPK 876
Query: 142 DQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ Q + ++ +Q + A + LG VYL+G V +D A F ++E+G+ A +
Sbjct: 877 NVQVGIQLLNESAEQGNQFAQFKLGIVYLSGKDVPRDKELARHYFTLSAEQGNELAQV 934
>gi|344924771|ref|ZP_08778232.1| hypothetical protein COdytL_09001 [Candidatus Odyssella
thessalonicensis L13]
Length = 1945
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 82 DNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS 141
D +T A YWL+K AA G+ AQ LG Q
Sbjct: 1298 DKDDTKAAYWLAK---------------------AAKQGNAFAQTNLGAMYGKGQGVKQD 1336
Query: 142 DQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG 201
D +A + KA Q + GA Y LG YL+G ++++ +A + +A+E+G A A G
Sbjct: 1337 DTKAIEWYTKAAQQENAGAQYNLGVSYLSGQGIEQNYGNAFYWLTKAAEQGIADAQYTLG 1396
Query: 202 SLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+ L+G + + T+ + AA++ A+ ++NL
Sbjct: 1397 LMYLKGQGIKQDDTRAKDLFIQAAEQGNADAQNNL 1431
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 88 ARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFY 147
A+Y L ++LK L + AA G+ DAQ LG Q +A Y
Sbjct: 1391 AQYTLGLMYLKGQGIKQDDTRAKDLFIQAAEQGNADAQNNLGLMYANGRGTEQDYAKAIY 1450
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
++ KA Q + A ++LG +Y +G V++D +A + A+++G A + G + L G
Sbjct: 1451 WLGKAAQQRNVNAQFMLGLMYASGRGVEQDYTNAAYWLGEAAQQGDPDAQLRLGFMHLNG 1510
Query: 208 VQV 210
+ V
Sbjct: 1511 LGV 1513
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 15/140 (10%)
Query: 86 THARYWL----------SKLHLKY-HVPGACKAMGAALLVD----AANMGDPDAQYELGC 130
T+A YWL ++L L + H+ G M +D A G+ +AQ L
Sbjct: 1482 TNAAYWLGEAAQQGDPDAQLRLGFMHLNGLGVDMNGEKAIDWLTRAGEQGNLEAQNSLSL 1541
Query: 131 RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
Q D +A Y+ A Q A + LG +YL G V KD A+ F +A E
Sbjct: 1542 MYLNGQGVKQDDTKAAYWFIAAAQQGDSDAQFRLGFMYLNGRGVGKDEDQAIVWFLKAVE 1601
Query: 191 KGHAGAAIAYGSLLLRGVQV 210
+G+A A + G + G V
Sbjct: 1602 QGNAYAQLNLGLMYANGQSV 1621
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ A + QY +G + S ++A ++ +A +Q + AL +LG + TG+
Sbjct: 1200 LLKIAKQSNSSVQYAIGVCYYYGHWVPLSHKRALKWLTRAAEQGNLDALSILGYICATGE 1259
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
KD A+ + +A+E+G+A A G + + G V + TK AAK+ A
Sbjct: 1260 GAAKDEDKAIRLYTKAAEQGNASAQSNLGLMYMNGQGVDKDDTKAAYWLAKAAKQGNAFA 1319
Query: 233 ESNL----------MNPVEKAKEQFEVAAQ-----AGCNLGLRWL--QRIEE 267
++NL KA E + AAQ A NLG+ +L Q IE+
Sbjct: 1320 QTNLGAMYGKGQGVKQDDTKAIEWYTKAAQQENAGAQYNLGVSYLSGQGIEQ 1371
>gi|222086264|ref|YP_002544796.1| hypothetical protein Arad_2748 [Agrobacterium radiobacter K84]
gi|221723712|gb|ACM26868.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 530
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G PDAQY LG QA + KA DQ G Y LG +Y G V
Sbjct: 366 SAEQGHPDAQYALGYIYDKGQGTAPDKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVP 425
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT-------KLNAKRVSAAKKA 228
KD A F +A+E+G+A A GS+ G VP+ + K + + A+ +
Sbjct: 426 KDYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDIGQATKWFRKAAGQGLPEAQHS 485
Query: 229 RANLESNLMNPVEKAKEQ 246
+ + +N NP++ A +
Sbjct: 486 LSYMAANGENPLKSASPE 503
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVD----AANMGDPDAQYELGCRLRVEN 136
AD A+Y L ++ K G A +L +D +A+ GDP +Y LG
Sbjct: 187 ADQGRADAQYALGYMYDK----GLGTAADQSLAIDWYQKSADQGDPQGEYALGYAYTNGR 242
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
Q D QA+ + +K+ +Q A Y LG + G V +D AL + +A+++G A A
Sbjct: 243 GVDQDDGQAYSWYKKSAEQGRADAQYGLGYSFANGLGVPRDYKLALQWYRKAADQGRADA 302
Query: 197 AIAYGSLLLRGVQVP 211
A G L G VP
Sbjct: 303 QYAVGYLYANGKGVP 317
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD + +Y L ++D +A + K+ +Q HP A Y LG +Y G
Sbjct: 330 AAAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTA 389
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D A + +A+++G AG A G L G VP+
Sbjct: 390 PDKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPK 426
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
V A G+ AQY LG R D QA + KA Q + A Y L +Y G
Sbjct: 40 VQFAKDGNAAAQYGLGYRYAKGQGVEHDDAQAVQWYRKAAAQGNVQAEYALAYMYSNGLG 99
Query: 174 VKKDIASALWCFHRASEKGHAGA--AIAYGSLLLRGVQV 210
V KD+ A + +A+E+G+A A AI Y RG V
Sbjct: 100 VDKDLKQANAWYRKAAEQGYADAQYAIGYSYANGRGTDV 138
>gi|46446348|ref|YP_007713.1| hypothetical protein pc0714 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399989|emb|CAF23438.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 445
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY LG R QSDQ+A Y + A +Q H A Y LG +Y +
Sbjct: 140 AAKQGHADAQYNLGVRYANGRGVTQSDQEAIKYYKLAAEQGHADAQYALGFMYANRWGIA 199
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A+ + A+E+GHA A A G + G+ V + + AA++ AN + N
Sbjct: 200 QSEQEAIKYYKLAAEQGHADAQYALGFIYANGLGVTQSDAEAFKYFKLAAEQGHANAQYN 259
Query: 236 L----------MNPVEKAKEQFEVAAQAG-----CNLGLRWL 262
L ++A + +++AA G NLG+R++
Sbjct: 260 LGVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRYV 301
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG R QSDQ+AF Y + A DQ H A Y LG Y+ G V
Sbjct: 248 AAEQGHANAQYNLGVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVM 307
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC------LTKLNAKRVSAAKKAR 229
+ A + A+++G+ A G G V + KL A + A KA+
Sbjct: 308 RSEQEAAKYYKLAADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQGHA--KAQ 365
Query: 230 ANLESNLMN------PVEKAKEQFEVAAQAG-----CNLGLRW 261
NL N ++A + +++AA G NLG R+
Sbjct: 366 YNLGVRYSNGRGVTQSEQEATKYYKLAADQGDAKAQYNLGARY 408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY LG QSD +AF Y + A +Q H A Y LG Y G V
Sbjct: 212 AAEQGHADAQYALGFIYANGLGVTQSDAEAFKYFKLAAEQGHANAQYNLGVRYSNGRGVT 271
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A + A+++GHA A G + G V + AA + + + N
Sbjct: 272 QSDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLAADQGYVDAQYN 331
Query: 236 L----------MNPVEKAKEQFEVAAQAG-----CNLGLRW 261
L M ++A + +++AA G NLG+R+
Sbjct: 332 LGVRYSNGRGVMQSDQEAIKYYKLAADQGHAKAQYNLGVRY 372
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G DAQY LG R +QSDQ+A Y + A DQ H A Y LG Y G V
Sbjct: 320 AADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQGHAKAQYNLGVRYSNGRGVT 379
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
+ A + A+++G A A G+ G V +
Sbjct: 380 QSEQEATKYYKLAADQGDAKAQYNLGARYANGRGVTQS 417
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQY LG R QS+Q+A Y + A DQ A Y LG Y G V
Sbjct: 356 AADQGHAKAQYNLGVRYSNGRGVTQSEQEATKYYKLAADQGDAKAQYNLGARYANGRGVT 415
Query: 176 KDIASALWCFHRASEKGHAGA 196
+ A + A+++GHA A
Sbjct: 416 QSEQEAAKYYKLAADQGHADA 436
>gi|189502556|ref|YP_001958273.1| hypothetical protein Aasi_1217 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497997|gb|ACE06544.1| hypothetical protein Aasi_1217 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1402
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD DAQY+LG R D Q D++A + +KA +Q A Y LG +Y G V
Sbjct: 768 AADQGDTDAQYKLGIIYRNGRDVAQDDRKAVEWFQKAAEQGLASAQYSLGFMYYNGYGVV 827
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A F +A+ +G+A A G + G V + K AA++ + + +++
Sbjct: 828 QDDAKAAEWFQKAAGQGNASAQYNLGRMYREGRGVAQDDKKAVEWYGKAAEQGQVDAQNS 887
Query: 236 L----------MNPVEKAKEQFEVAAQAG 254
L KA E F+ AA+ G
Sbjct: 888 LGAMYYNGHGVAQDDRKAVEWFQKAAEKG 916
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ AQ LG R VQ D++A + +KA +Q + A Y LG +Y G V
Sbjct: 1200 AADQGNASAQNSLGFMYREGRGVVQDDKKAVEWYQKAAEQGNASAQYSLGFMYREGRSVV 1259
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+GHA A + G + G V + K AA++ + ++N
Sbjct: 1260 QDDRKAVEWYQKAAEQGHASAQNSLGWMYENGRGVAQDDIKAVEWYQKAAEQGNIDAQNN 1319
Query: 236 L 236
L
Sbjct: 1320 L 1320
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ A GD + QY +G R Q D +A + +KA DQ + A Y LG +Y G
Sbjct: 476 LIESGAGQGDAETQYNIGRMYRNGRGTAQDDAKAVEWFQKAADQGNASAQYNLGRMYRDG 535
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V +D A+ + +A+++G+A A G + G+ V + K AA +
Sbjct: 536 RGVAQDDKKAVEWYQKAADQGNASAQANLGWMYKNGLGVAQDDAKAVEWYQKAADQGDTI 595
Query: 232 LESNLMN 238
++NL N
Sbjct: 596 AQNNLGN 602
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 2/177 (1%)
Query: 60 NDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANM 119
N R + + A E F+ A A N A+Y L +++ A AA
Sbjct: 678 NGRGVAKDERKAAEWFQKA--AGQGNASAQYNLGRMYDDGEGLEKDHAKAVVWYTKAAEQ 735
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G +AQY LG + D +A + +KA DQ A Y LG +Y G V +D
Sbjct: 736 GHINAQYNLGISYEDGEGVEKDDNKAREWYQKAADQGDTDAQYKLGIIYRNGRDVAQDDR 795
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
A+ F +A+E+G A A + G + G V + K AA + A+ + NL
Sbjct: 796 KAVEWFQKAAEQGLASAQYSLGFMYYNGYGVVQDDAKAAEWFQKAAGQGNASAQYNL 852
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ LG + D++AF + +KA +Q H A Y LG Y G V
Sbjct: 624 AAEQGQVDAQNSLGVMYDDGEGLEKDDKKAFEWYQKAAEQGHVTAQYNLGVRYGNGRGVA 683
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV----SAAKKARAN 231
KD A F +A+ +G+A A G + G E L K +AK V AA++ N
Sbjct: 684 KDERKAAEWFQKAAGQGNASAQYNLGRMYDDG----EGLEKDHAKAVVWYTKAAEQGHIN 739
Query: 232 LESNLMNPVE----------KAKEQFEVAAQAG 254
+ NL E KA+E ++ AA G
Sbjct: 740 AQYNLGISYEDGEGVEKDDNKAREWYQKAADQG 772
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD AQ LG R R Q D++A + +KA +Q A LG +Y G+ ++
Sbjct: 588 AADQGDTIAQNNLGNRYRDGRGVAQDDKKAVEWYQKAAEQGQVDAQNSLGVMYDDGEGLE 647
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A + +A+E+GH A G G V + K AA + A+ + N
Sbjct: 648 KDDKKAFEWYQKAAEQGHVTAQYNLGVRYGNGRGVAKDERKAAEWFQKAAGQGNASAQYN 707
Query: 236 L 236
L
Sbjct: 708 L 708
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ LGC + Q D++A + +KA ++ + A LG +Y G V
Sbjct: 948 AAEQGQVDAQNSLGCMYKNGWGVAQDDRKAVEWFQKAAEKGNVLAQNSLGCMYKNGWGVA 1007
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ F +A+EKG+A A + G + G + + K AA+K ++N
Sbjct: 1008 QDDRKAVEWFQKAAEKGNASAQYSLGCMYREGRGIAQDDRKAVEWYQKAAEKGDVLAQNN 1067
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLTES 276
L E + + A+A + W Q+ E+ L S
Sbjct: 1068 LGWMYENGRGVVQDGAKA-----VEWYQKAAEQGNVLAQNS 1103
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 12/205 (5%)
Query: 60 NDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANM 119
N R + + A E F+ A A+ A+Y L ++ + A A AA
Sbjct: 786 NGRDVAQDDRKAVEWFQKA--AEQGLASAQYSLGFMYYNGYGVVQDDAKAAEWFQKAAGQ 843
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G+ AQY LG R Q D++A + KA +Q A LG +Y G V +D
Sbjct: 844 GNASAQYNLGRMYREGRGVAQDDKKAVEWYGKAAEQGQVDAQNSLGAMYYNGHGVAQDDR 903
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL--- 236
A+ F +A+EKG+ A + G + G V + K AA++ + + +++L
Sbjct: 904 KAVEWFQKAAEKGNVLAQNSLGCMYKNGWGVAQDDKKAVEWYGKAAEQGQVDAQNSLGCM 963
Query: 237 -------MNPVEKAKEQFEVAAQAG 254
KA E F+ AA+ G
Sbjct: 964 YKNGWGVAQDDRKAVEWFQKAAEKG 988
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG R VQ D +A + +KA DQ + A LG +Y G V
Sbjct: 1164 AAEQGHASAQNSLGFMYREGRGVVQDDAKAVEWYQKAADQGNASAQNSLGFMYREGRGVV 1223
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G+A A + G + G V + K AA++ A+ +++
Sbjct: 1224 QDDKKAVEWYQKAAEQGNASAQYSLGFMYREGRSVVQDDRKAVEWYQKAAEQGHASAQNS 1283
Query: 236 L 236
L
Sbjct: 1284 L 1284
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQY LGC R Q D++A + +KA ++ A LG +Y G V
Sbjct: 1020 AAEKGNASAQYSLGCMYREGRGIAQDDRKAVEWYQKAAEKGDVLAQNNLGWMYENGRGVV 1079
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A A+ + +A+E+G+ A + G + G V +
Sbjct: 1080 QDGAKAVEWYQKAAEQGNVLAQNSLGCMYREGRGVAQ 1116
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ LGC R Q ++A + +KA +Q + A LG +Y G V
Sbjct: 1092 AAEQGNVLAQNSLGCMYREGRGVAQDGKKAVEWFQKAAEQGNVLAQNSLGWMYREGRGVA 1151
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ +A+E+GHA A + G + G V + K AA + A+ +++
Sbjct: 1152 QDDRKAVEWHQKAAEQGHASAQNSLGFMYREGRGVVQDDAKAVEWYQKAADQGNASAQNS 1211
Query: 236 L 236
L
Sbjct: 1212 L 1212
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ LGC + Q D++A + KA +Q A LG +Y G V
Sbjct: 912 AAEKGNVLAQNSLGCMYKNGWGVAQDDKKAVEWYGKAAEQGQVDAQNSLGCMYKNGWGVA 971
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ F +A+EKG+ A + G + G V + K AA+K A+ + +
Sbjct: 972 QDDRKAVEWFQKAAEKGNVLAQNSLGCMYKNGWGVAQDDRKAVEWFQKAAEKGNASAQYS 1031
Query: 236 L 236
L
Sbjct: 1032 L 1032
>gi|56550925|ref|YP_161764.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542499|gb|AAV88653.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 632
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL + A GD +AQY+ + + Q +QA Y+ +KA DQ P A LG +Y G
Sbjct: 367 LLREKAEKGDKEAQYDFALKYYEGKEISQDFKQAVYWFQKAADQGDPSATLNLGALYYDG 426
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K D + A F + +++ + A + G L RG VP+ K
Sbjct: 427 KLGKTDFSKAATLFQKTADQNYPKAQLFLGILYERGEGVPQDTQK 471
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A + Y L + K V G K AL +AA GD +A +G L D
Sbjct: 46 ASRGDHKVEYILGTFYSKGDVEGIPKDFHLALHWYQEAAKDGDKEAAQMIGL-LYYNGDG 104
Query: 139 VQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
V D +A Y+ EKA + + A L T+Y+ G+ V K++ + + +A + G +A
Sbjct: 105 VPIDIAKAAYWFEKAANAGNWDAARRLATLYINGEGVPKNVEKGISWYKKAIQSGDIDSA 164
Query: 198 IAYGSLLLRGVQVP 211
G L G VP
Sbjct: 165 RRLGMLYWMGDDVP 178
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 117 ANMGDPDAQYELGCRL-RVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A+ GD +Y LG + + + + D A ++ ++A A ++G +Y GD V
Sbjct: 46 ASRGDHKVEYILGTFYSKGDVEGIPKDFHLALHWYQEAAKDGDKEAAQMIGLLYYNGDGV 105
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
DIA A + F +A+ G+ AA +L + G VP+ + K
Sbjct: 106 PIDIAKAAYWFEKAANAGNWDAARRLATLYINGEGVPKNVEK 147
>gi|71064936|ref|YP_263663.1| hypothetical protein Psyc_0360 [Psychrobacter arcticus 273-4]
gi|71037921|gb|AAZ18229.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 305
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA+ GD +AQ+ LG + D Q + A + +KA +Q H + + LG++Y G
Sbjct: 29 LYQKAAHNGDAEAQFNLGLTYKDGQDVQQDNSMAVKWYQKAAEQGHIASQFNLGSLYRDG 88
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V++D + A + +A+E+GH + GSL G V + + AA++
Sbjct: 89 KGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYRDGKGVQQDFSLAAEWYQKAAEQGHIA 148
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
+ NL + + K Q L ++W Q+ E+
Sbjct: 149 SQFNLGSLYQDGK-----GIQQDFALAVKWYQKAAEQ 180
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +Q+ LG R Q A + +KA +Q H + + LG++Y G ++
Sbjct: 105 AAEQGHIASQFNLGSLYRDGKGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYQDGKGIQ 164
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+GH + GSL G V + AA++ + N
Sbjct: 165 QDFALAVKWYQKAAEQGHIASQFNLGSLYQEGKDVQQDFALAAKWYQKAAEQGHIASQFN 224
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
L + ++ K+ Q L +W Q+ E+
Sbjct: 225 LGSLYQEGKD-----VQQDFALAAKWYQKAAEQ 252
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +Q+ LG + D Q A + +KA +Q H + + LG++Y G V+
Sbjct: 177 AAEQGHIASQFNLGSLYQEGKDVQQDFALAAKWYQKAAEQGHIASQFNLGSLYQEGKDVQ 236
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A A + +A+E+GH + GSL G
Sbjct: 237 QDFALAAKWYQKAAEQGHIASQFNLGSLYQEG 268
>gi|148264042|ref|YP_001230748.1| Sel1 domain-containing protein [Geobacter uraniireducens Rf4]
gi|146397542|gb|ABQ26175.1| Sel1 domain protein repeat-containing protein [Geobacter
uraniireducens Rf4]
Length = 557
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ +AQ+ LG V DYV++ A +Y+ KA +Q + GA + LG +Y G
Sbjct: 141 AALQGNANAQFNLGLMCNKGQGVSRDYVEA---AKWYL-KAAEQGNSGAQFNLGLMYYKG 196
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
D V ++ A A + +A+E+G+AGA + G + +G VP+ + A +A++
Sbjct: 197 DGVARNFAEAFTWYRKAAEQGNAGAQFSLGLMYYKGQGVPKNFAEAAAWYRKSAEQGHVG 256
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
+ NL E E A G +W ++ E+
Sbjct: 257 AQFNLGYMYE-----MEQGAVGGNAEAAKWYRKAAEQ 288
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ N A++ L ++ K A AA +A G AQ+ LG +E V
Sbjct: 214 AEQGNAGAQFSLGLMYYKGQGVPKNFAEAAAWYRKSAEQGHVGAQFNLGYMYEMEQGAVG 273
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+ +A + KA +Q H GA LG +Y G+ V +D A A + +A+E+G+A A +
Sbjct: 274 GNAEAAKWYRKAAEQGHAGAQSNLGYIYDIGEGVPQDHAEAAKWYRKAAEQGNAAAQLNL 333
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAKKA 228
G + G +++ NA+ V +KA
Sbjct: 334 GIMYDNG----HGISQDNAEAVKWYRKA 357
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY +G + +++ +A + KA DQ H + LG +Y D V
Sbjct: 357 AAEQGDMTAQYNMGVKYANGIGVPRNNAEAVEWYRKAADQGHEISQVNLGHLYENSDGVP 416
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A AL + +A+E+ ++ A + G + +G P+
Sbjct: 417 QDYAQALKWYGKAAEQENSDAQFSLGLMYAKGQGTPQ 453
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%)
Query: 102 PGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGAL 161
P A ++ A + A G DAQ+ G +Q +A + KA +Q H GA
Sbjct: 55 PRAVRSANIAEIRKLAIEGHVDAQFYTGFMYEKGQGVLQDYAEAVKWYLKAAEQGHAGAQ 114
Query: 162 YLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKR 221
+G +Y G V D A A + +A+ +G+A A G + +G V +
Sbjct: 115 INVGIMYFKGQGVLPDYAEAAKWYRKAALQGNANAQFNLGLMCNKGQGVSRDYVEAAKWY 174
Query: 222 VSAAKKARANLESNL 236
+ AA++ + + NL
Sbjct: 175 LKAAEQGNSGAQFNL 189
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG + Q +A + KA +Q + A LG +Y G +
Sbjct: 285 AAEQGHAGAQSNLGYIYDIGEGVPQDHAEAAKWYRKAAEQGNAAAQLNLGIMYDNGHGIS 344
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVS----AAKKARAN 231
+D A A+ + +A+E+G A G G+ VP + NA+ V AA +
Sbjct: 345 QDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVP----RNNAEAVEWYRKAADQGHEI 400
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEE 269
+ NL + E + + AQA L+W + E+E
Sbjct: 401 SQVNLGHLYENSDGVPQDYAQA-----LKWYGKAAEQE 433
>gi|406660037|ref|ZP_11068172.1| Putative beta-lactamase hcpC precursor [Cecembia lonarensis LW9]
gi|405556171|gb|EKB51121.1| Putative beta-lactamase hcpC precursor [Cecembia lonarensis LW9]
Length = 445
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G +LL +AA G+P AQ LG N ++ Q+ A DQ HP A + +G +Y
Sbjct: 204 GISLLKEAAQAGNPQAQLNLGFAFHYGNGVQKNYQETERLYRLAADQGHPAAEFNMGILY 263
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V+++ A A F RA++KG A A G L G V + T+
Sbjct: 264 RDGLSVQQNFAEAYNWFERAAKKGFANAEFEIGLLYYNGTGVKKDDTE 311
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +A++E+G + D +A + KA +Q + A LG +Y G VK
Sbjct: 283 AAKKGFANAEFEIGLLYYNGTGVKKDDTEAVKWYLKAAEQEYTLAERSLGIMYANGYGVK 342
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+ KG+A A + G + G V T+ AA + A+ ++N
Sbjct: 343 KDDTEAVKWYRKAANKGNATAQLNLGIMYANGRGVKRDYTEAVKWYRKAADQGNASAQNN 402
Query: 236 L 236
L
Sbjct: 403 L 403
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G P A++ +G R Q+ +A+ + E+A + A + +G +Y G VK
Sbjct: 247 AADQGHPAAEFNMGILYRDGLSVQQNFAEAYNWFERAAKKGFANAEFEIGLLYYNGTGVK 306
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+E+ + A + G + G V + T+ AA K A + N
Sbjct: 307 KDDTEAVKWYLKAAEQEYTLAERSLGIMYANGYGVKKDDTEAVKWYRKAANKGNATAQLN 366
Query: 236 L 236
L
Sbjct: 367 L 367
>gi|421863475|ref|ZP_16295172.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379065|emb|CBX22367.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 306
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ +LG Q D QA + KA +Q + GA Y LG +Y TG+ V+
Sbjct: 35 AAEQGNAQAQSDLGVMYYTGEGVRQDDVQAVQWFRKAAEQGYAGAQYNLGAMYYTGEGVR 94
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV----SAAKKARAN 231
+D A A+ + +A+E+G A A G + +G E + + NA+ V AA++ A
Sbjct: 95 QDDAQAVQWYRKAAEQGLAQAQSDLGLMYYKG----EGVRQDNAQAVHWFRKAAEQGLAQ 150
Query: 232 LESNL 236
+SNL
Sbjct: 151 AQSNL 155
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG Q D Q + KA +Q A + LG +Y G V+
Sbjct: 179 AAEQGDAQAQSYLGDMYAQGRGVRQDDAQVVQWYRKAAEQGLARAQFNLGVMYDNGRGVR 238
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+D A A+ + +A+E+ +A A G + +G V + L
Sbjct: 239 QDDAQAVQWYRKAAEQEYADAQNNLGVMYEQGQGVLQDLA 278
>gi|376262715|ref|YP_005149435.1| hypothetical protein [Clostridium sp. BNL1100]
gi|373946709|gb|AEY67630.1| TPR repeat-containing protein [Clostridium sp. BNL1100]
Length = 1004
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L L +D N A+Y L+KL+L V L AA + AQY+L +L +
Sbjct: 776 LTLSSDLRNQFAQYALAKLYLSGEVIPKNIPKAVELFTKAAVQNNSFAQYQL-SKLYLSG 834
Query: 137 DYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ V D A ++ + +Q + A Y LG +YL+G+ V KD+ASA+ ++E+G+
Sbjct: 835 EDVPKDVASAVKWLTASAEQGNQYAQYRLGKLYLSGEDVPKDVASAIRWLTASAEQGNQY 894
Query: 196 AAIAYGSLLLRGVQVP 211
A A G L L G VP
Sbjct: 895 AQYATGKLYLMGRDVP 910
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-Q 143
N HA+Y L K++L L AA G+ AQY LG +L + +V+ D Q
Sbjct: 676 NVHAQYMLGKIYLDTESGHENIEQAILWLTKAAENGNDLAQYALG-KLYRDGSHVEKDIQ 734
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+A + +Q + A Y LG +YL + V KD+ SA+ +S+ + A A L
Sbjct: 735 KAISLFTLSAEQDNSYAAYALGKIYLLDEAVPKDVESAMKWLTLSSDLRNQFAQYALAKL 794
Query: 204 LLRGVQVPECLTK 216
L G +P+ + K
Sbjct: 795 YLSGEVIPKNIPK 807
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 77 LALEADNSNTHARYWLSKLHL-KYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE 135
L A+ N++A Y L K++L VP ++ L + ++++ + AQY L +L +
Sbjct: 740 FTLSAEQDNSYAAYALGKIYLLDEAVPKDVESAMKWLTL-SSDLRNQFAQYAL-AKLYLS 797
Query: 136 NDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
+ + + +A KA Q + A Y L +YL+G+ V KD+ASA+ ++E+G+
Sbjct: 798 GEVIPKNIPKAVELFTKAAVQNNSFAQYQLSKLYLSGEDVPKDVASAVKWLTASAEQGNQ 857
Query: 195 GAAIAYGSLLLRGVQVP 211
A G L L G VP
Sbjct: 858 YAQYRLGKLYLSGEDVP 874
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
D QY LG L + + A Y EKA + A Y+LG +YL + ++I
Sbjct: 640 DDKLQYRLGHMLYTGTGTEKDVEAAIGYFEKAARLGNVHAQYMLGKIYLDTESGHENIEQ 699
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+ +A+E G+ A A G L G V + + K
Sbjct: 700 AILWLTKAAENGNDLAQYALGKLYRDGSHVEKDIQK 735
>gi|384411700|ref|YP_005621065.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932074|gb|AEH62614.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 632
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL + A GD +AQY+ + + Q+ +QA Y+ +KA DQ P A LG +Y G
Sbjct: 367 LLREKAEKGDKEAQYDFALKYYEGKEISQNFKQAAYWFQKAADQGDPSATLNLGALYYDG 426
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K D + A F + +++ + A + G L RG VP+ K
Sbjct: 427 KLGKTDFSKAATLFQKTADQNYPKAQLFLGILYERGEGVPQDTQK 471
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 117 ANMGDPDAQYELGCRL-RVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A+ GD +Y LG + + + + D A ++ ++A A ++G +Y GD V
Sbjct: 46 ASRGDHKVEYILGTFYSKGDVEGIPKDFHLALHWYQEAAKDGDKEAAQMIGLLYYNGDGV 105
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
DIA A + F +A+ G+ AA +L + G VP+ + K
Sbjct: 106 PIDIAKAAYWFEKAANAGNWDAARRLATLYINGEGVPKNVEK 147
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A + Y L + K V G K AL +AA GD +A +G L D
Sbjct: 46 ASRGDHKVEYILGTFYSKGDVEGIPKDFHLALHWYQEAAKDGDKEAAQMIGL-LYYNGDG 104
Query: 139 VQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
V D +A Y+ EKA + + A L T+Y+ G+ V K++ + + +A G +A
Sbjct: 105 VPIDIAKAAYWFEKAANAGNWDAARRLATLYINGEGVPKNVEKGISWYKKAILSGDIDSA 164
Query: 198 IAYGSLLLRGVQVP 211
G L G VP
Sbjct: 165 RRLGMLYWMGDDVP 178
>gi|237746450|ref|ZP_04576930.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377801|gb|EEO27892.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 1527
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 61/136 (44%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A +T A+Y L+ L+ AM L AA GDP AQY LG + +
Sbjct: 717 ARQGDTKAQYKLALLYTNASGTAKNDAMALQWLEKAAENGDPAAQYRLGVENHIGKRLPE 776
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+ + A + KA DQ H A Y LG + L G+ +K+ A A ++++ GHA A
Sbjct: 777 NPEAARQWYRKAADQSHAEAQYWLGVLTLNGEGGEKNPAEAFRWMEKSAKNGHAEAQYQL 836
Query: 201 GSLLLRGVQVPECLTK 216
G G +PE K
Sbjct: 837 GLAFRDGDIIPENKPK 852
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
GA LL++AA GDP Y G + + +S + A +I +A + + A Y +GT
Sbjct: 529 GARLLLEAAQQGDPQGMYFRGQAILAHDSSPESAKTALRWISEAAQKGYANAQYWMGTEN 588
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
TG + K++ +A + RA+E+G+A A Y L G + ++K AAK
Sbjct: 589 HTGKRIPKNLKAACEWYRRAAEQGYATAQYWYAHCLQEGTSDAQDVSKALVWFEKAAKNG 648
Query: 229 RANLESNL 236
A+ + L
Sbjct: 649 NADAQYTL 656
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AA G+P AQY LG + Q+AF + ++ Q P A Y L Y G
Sbjct: 99 EAAKAGEPYAQYFLGLMYLSGKGTTVNPQKAFDWFLQSARQNLPDAQYWLAGCYAKGRGT 158
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
K A++ + A+E GH GA G LL GV +P+
Sbjct: 159 AKSEREAMYWYRIAAENGHVGAQTGMGLALLYGVGLPQ 196
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 83 NSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQ 140
N N A + L + L + G K G AL LV A G P+AQ LG Q
Sbjct: 1117 NGNLDASFVLGYMTLLGN--GVPKDTGKALDILVPVAEKGQPEAQNLLGVLYSKGMGVPQ 1174
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+ + A + EKA Q PG + L Y TGD ++D A A + R++E G A A
Sbjct: 1175 NAKMACLWFEKAARQDEPGGQFGLARCYDTGDGGEQDFAKAAHWYTRSAEAGFPKAQYAL 1234
Query: 201 GSLLLRGV 208
G L G+
Sbjct: 1235 GILYREGL 1242
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A + AA G +AQY G L + ++++QA ++IEKA + A ++LG + L
Sbjct: 1073 ASFLQAAEAGYAEAQYMTGKALWNGHGVAKNEKQAAFWIEKASRNGNLDASFVLGYMTLL 1132
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G+ V KD AL +EKG A G L +G+ VP+
Sbjct: 1133 GNGVPKDTGKALDILVPVAEKGQPEAQNLLGVLYSKGMGVPQ 1174
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 113 LVDAANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
LV +A G P AQ L R + D +QA ++E+A ++ A L+G++Y
Sbjct: 241 LVRSAKGGWPQAQLSLAMAYLLRYSRQKDNPDEAKQAVQWVEEAAERNDLEATRLMGSLY 300
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+G V D+ A + + RA+E G A + YG +L GV V
Sbjct: 301 QSGLAVGVDMKKAAYWYRRAAEAGDAESQNLYGKMLTAGVGV 342
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLL 164
+A G L AAN D AQY L R + YV+ D++ AFY+ EKA A Y L
Sbjct: 1320 RATGFGWLEKAANGDDEIAQYRL-ARAYDKGFYVEKDEKKAFYWTEKAAQHDFAEARYDL 1378
Query: 165 GTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
G Y G V KD A A A++ GH A A L +G+
Sbjct: 1379 GMRYQMGLGVPKDHAKAFHWHLLAAKAGHRDAQSALAFLYEQGL 1422
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + A+YWL+ L+ AL AA GD AQY+L + +
Sbjct: 681 AEQGHVKAQYWLATCLLEGLGGPENPEEAFALYEKAARQGDTKAQYKLALLYTNASGTAK 740
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+D A ++EKA + P A Y LG G + ++ +A + +A+++ HA A
Sbjct: 741 NDAMALQWLEKAAENGDPAAQYRLGVENHIGKRLPENPEAARQWYRKAADQSHAEAQYWL 800
Query: 201 GSLLLRG 207
G L L G
Sbjct: 801 GVLTLNG 807
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
ALL +AA GDP A + LG + Q ++AF +A + + A Y+ G
Sbjct: 1037 ALLENAAQTGDPTALHYLGYCYQEGRGTPQDPKKAFASFLQAAEAGYAEAQYMTGKALWN 1096
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V K+ A + +AS G+ A+ G + L G VP+ K
Sbjct: 1097 GHGVAKNEKQAAFWIEKASRNGNLDASFVLGYMTLLGNGVPKDTGK 1142
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 40/97 (41%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ L + ++AFY+ + P AL+LLG YL+G
Sbjct: 1402 AAKAGHRDAQSALAFLYEQGLGTQKDTKKAFYWYTEGARDGDPTALFLLGNCYLSGTGTP 1461
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D L A+E+G GA G G VP+
Sbjct: 1462 IDKKKGLALVREAAERGQPGAQYLLGRYHESGSDVPK 1498
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 81 ADNSNTHARYWL-SKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A +A+YW+ ++ H +P KA AA G AQY L+
Sbjct: 573 AQKGYANAQYWMGTENHTGKRIPKNLKAA-CEWYRRAAEQGYATAQYWYAHCLQEGTSDA 631
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q +A + EKA + A Y LG + G+ + K++ +A + +A+E+GH A
Sbjct: 632 QDVSKALVWFEKAAKNGNADAQYTLGILNHNGEGIPKNLEAARRWYRQAAEQGHVKAQYW 691
Query: 200 YGSLLLRGVQVPE 212
+ LL G+ PE
Sbjct: 692 LATCLLEGLGGPE 704
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 39/100 (39%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA GD AQ +G + + QAF + EKA P + L +Y G
Sbjct: 389 LKSAAEKGDIQAQNMMGGAYFAGKGVAKDEGQAFIWFEKAAQYGDPLSQLNLARMYHAGQ 448
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V KD A RA+E G A G G VPE
Sbjct: 449 GVAKDETKARKWLSRAAENGQPEAQYLLGQAYRDGRGVPE 488
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
GA LL AA DP AQY L Q F ++EKA + A Y L Y
Sbjct: 1287 GATLLHAAARQDDPAAQYHLALLYIYGIGLPQDRATGFGWLEKAANGDDEIAQYRLARAY 1346
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
G V+KD A + +A++ A A G G+ VP+ K + AAK
Sbjct: 1347 DKGFYVEKDEKKAFYWTEKAAQHDFAEARYDLGMRYQMGLGVPKDHAKAFHWHLLAAKAG 1406
Query: 229 RANLESNL 236
+ +S L
Sbjct: 1407 HRDAQSAL 1414
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 114 VDAANMGDPDAQYELG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ A GDP A + LG C L + ++ + +A ++ PGA YLLG + +G
Sbjct: 1436 TEGARDGDPTALFLLGNCYLSGTGTPIDK-KKGLALVREAAERGQPGAQYLLGRYHESGS 1494
Query: 173 CVKKDIASALWCFHRASEKGHAGA 196
V KD A A+ + A+ G+A A
Sbjct: 1495 DVPKDRAQAIHWYTLAAGNGNAKA 1518
>gi|260753381|ref|YP_003226274.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552744|gb|ACV75690.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 599
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL + A GD +AQY+ + + Q +QA Y+ +KA DQ P A LG +Y G
Sbjct: 334 LLREKAEKGDKEAQYDFALKYYEGKEISQDFKQAAYWFQKAADQGDPSATLNLGALYYDG 393
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K D + A F + +++ + A + G L RG VP+ K
Sbjct: 394 KLGKTDFSKAATLFQKTADQNYPKAQLFLGILYERGEGVPQDTQK 438
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A + Y L + K V G K AL +AA GD +A +G L D
Sbjct: 13 ASRGDHKVEYILGTFYSKGDVEGIPKDFHLALHWYQEAAKDGDKEAAQMIGL-LYYNGDG 71
Query: 139 VQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
V D +A Y+ EKA + + A L T+Y+ G+ V K++ + + +A + G +A
Sbjct: 72 VPIDIAKAAYWFEKAANAGNWDAARRLATLYINGEGVPKNVEKGISWYKKAIQSGDIDSA 131
Query: 198 IAYGSLLLRGVQVP 211
G L G VP
Sbjct: 132 RRLGMLYWMGDDVP 145
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
A ++ ++A A ++G +Y GD V DIA A + F +A+ G+ AA +L
Sbjct: 43 ALHWYQEAAKDGDKEAAQMIGLLYYNGDGVPIDIAKAAYWFEKAANAGNWDAARRLATLY 102
Query: 205 LRGVQVPECLTK 216
+ G VP+ + K
Sbjct: 103 INGEGVPKNVEK 114
>gi|56550922|ref|YP_161761.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542496|gb|AAV88650.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 315
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ DAQ LG + ++DQ+A ++++KA DQ P A LG VY TGD
Sbjct: 119 AADQGNLDAQTLLGAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAV 178
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
++I A+ + RA+E A G G ++P+ K
Sbjct: 179 RNIEKAISWYQRAAEGNSVTAQAHLGMAYHEGTKLPKNYEK 219
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 113 LVDAANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
L AA+ G+ DA+ ++G + +DY + ++++KA DQ H A LLG Y
Sbjct: 44 LQKAADQGNADAEAKVGFGYFRGKTLPHDYAK----GIFWLQKAADQGHSDAETLLGNAY 99
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G + K+ A++ + +A+++G+ A G+ G VP+
Sbjct: 100 QQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPK 143
>gi|119944864|ref|YP_942544.1| TPR repeat- and Sel1 domain-containing protein [Psychromonas
ingrahamii 37]
gi|119863468|gb|ABM02945.1| Sel1 domain and tetratricopeptide repeat-containing protein
[Psychromonas ingrahamii 37]
Length = 523
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 84 SNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ 143
+N A+Y L+ ++ A + AAN G D+Q++LG + N +Q+D
Sbjct: 45 NNVAAQYVLASIYDNSTEAIANPESAVVWYLKAANQGHVDSQFQLGLHYQDGNGALQNDL 104
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
Q+F + KA Q H A LG +Y +G VK+D +A+ + AS +G A A L
Sbjct: 105 QSFLWFSKAAAQRHLSAQLHLGKIYQSGKGVKQDYQAAIKWYKEASSQGSANATFYLAQL 164
Query: 204 --LLRGV 208
L RGV
Sbjct: 165 YELGRGV 171
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 82 DNSNTHARYWLSKLHLKYHVPGACKA-----MGAALLVD----------AANMGDPDAQY 126
DN H+ Y S K+ P A K+ G A +D AAN GD AQY
Sbjct: 174 DNQRAHSLYLASAA--KHFAPAAYKSGEFYENGKAGKIDLKEAIKWYESAANKGDSAAQY 231
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD-CVKKDIASALWCF 185
+L + + Q+ + A + ++A + HP A + LG +Y G+ + D + A +
Sbjct: 232 KLAKLYQGGSGVEQNIRLAINWYKQAAIKNHPQAYHHLGLIYENGEQGINVDKSKAFDYY 291
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVP 211
+ASE G A+ + +G+ VP
Sbjct: 292 QKASELGDVSASAQLAAYYEQGIGVP 317
>gi|89892776|ref|YP_516263.1| hypothetical protein DSY0030 [Desulfitobacterium hafniense Y51]
gi|89332224|dbj|BAE81819.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 959
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 78 ALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVE 135
L A+ N A Y L KL+L G K + +A+ L AA+ + A+Y LG
Sbjct: 733 TLSAEQDNEFAAYRLGKLYLD--GDGVLKDVESAIRWLTFAADRKNQFAEYALGVLYFKG 790
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
D + +A Y++++ Q + A Y LG +YL G+ V KDI +AL A+E+G+
Sbjct: 791 EDIPKDVPKALEYLKRSAGQGNQFAQYRLGKIYLMGEDVPKDIQTALQFLTAAAEQGNQY 850
Query: 196 AAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLM 237
A G L L G VP+ K A R A+ N+ +
Sbjct: 851 AQYTLGKLYLIGKDVPK--DKETAVRWFTLSAAQGNIYAQFF 890
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHL---KYHVPGACKAMGAALLVDAANMGDPDAQYE 127
AKE FE A A N A Y L+K L K KA+G L A +P A Y
Sbjct: 655 AKEYFEKA--ASVGNPFACYQLAKFILSDEKAQPQDVEKALG--YLRKAVEAENPYAAYF 710
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
LG Q+ +A + +Q + A Y LG +YL GD V KD+ SA+
Sbjct: 711 LGKLYEKGQHVPQNTAEAMRLYTLSAEQDNEFAAYRLGKLYLDGDGVLKDVESAIRWLTF 770
Query: 188 ASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+++ + A A G L +G +P+ + K
Sbjct: 771 AADRKNQFAEYALGVLYFKGEDIPKDVPK 799
>gi|397615049|gb|EJK63183.1| hypothetical protein THAOC_16180 [Thalassiosira oceanica]
Length = 531
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTV 167
G +L D A G DAQ LG +L + D +A + +KA DQ HP +Y L
Sbjct: 364 GLKMLSDLAERGFADAQCYLGMKLNDGYARIPPDSIKAVEWFKKAADQDHPQGIYELAVA 423
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
Y TG+ V++D A+ F RA EK AA G LL GV V
Sbjct: 424 YYTGEGVEEDEELAVHLFRRAGEKNVPAAAYMLGDCLLDGVGV 466
>gi|149198181|ref|ZP_01875228.1| hypothetical protein LNTAR_16007 [Lentisphaera araneosa HTCC2155]
gi|149138783|gb|EDM27189.1| hypothetical protein LNTAR_16007 [Lentisphaera araneosa HTCC2155]
Length = 433
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 39/189 (20%)
Query: 57 CELNDRRLIPLLKTAKENFE-LALEADNSN--THARY-------------------WLSK 94
E ++ R P + KE + L L ADN N + AR W +
Sbjct: 210 AEFSNNREYPSVYDPKEALKWLMLSADNGNPVSEARVAYCYQNGIGVRKDNEIAVNWFLR 269
Query: 95 LHLKYHVP-----GACKAMGAALLVD----------AANMGDPDAQYELG-CRLRVENDY 138
K + P G C ++G+ + D AA +G+P Y G C LR
Sbjct: 270 AANKNYPPAQVALGNCYSVGSGVSSDLEIAYSWYEKAARLGNPSGLYNAGVCHLRGIGTK 329
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
V ++ YY +++ +Q + ALY+LG +Y G+ VK+DI+ A+ + +A+ + H+GA
Sbjct: 330 VNVERGLDYY-QRSAEQGYAQALYVLGYMYEVGEDVKQDISKAIINYQKAAVQNHSGALY 388
Query: 199 AYGSLLLRG 207
G + L G
Sbjct: 389 ELGRIYLDG 397
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G A Y LG V D Q +A +KA Q H GALY LG +YL G +K
Sbjct: 342 SAEQGYAQALYVLGYMYEVGEDVKQDISKAIINYQKAAVQNHSGALYELGRIYLDGKFMK 401
Query: 176 KDIASALWCFHRASEKGHAGAAIAY 200
+ A +++E G+ A + Y
Sbjct: 402 VNRDQAELMLKKSAEMGNREAFVLY 426
>gi|315453272|ref|YP_004073542.1| Sel1 domain-containing protein [Helicobacter felis ATCC 49179]
gi|315132324|emb|CBY82952.1| Sel1 domain protein repeat-containing protein [Helicobacter felis
ATCC 49179]
Length = 260
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
QSD +A Y +KA + A Y LG +Y G VK+D A A F++A++KG+AGA
Sbjct: 120 QSDSKALEYYQKAASMGYAKAYYNLGAMYRDGQGVKQDYAKAFEYFNKAAKKGNAGAYSD 179
Query: 200 YGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLESNLM--------NPVEKAKEQFEV 249
G + G VP+ K K+ A A +M + KA+E E
Sbjct: 180 LGFMYANGQGVPQDALKAKEYWKKAGRMGDAEAYFNIGVMYFNGLGVSKDLAKAREYLEK 239
Query: 250 AAQAGCNLGLRWLQRIEEE 268
AA+ G + L RI+ +
Sbjct: 240 AAKIGSGDAIEILNRIKSK 258
>gi|410688508|ref|YP_006961777.1| truncated hypothetical protein, Sel1 domain protein [Psychrobacter
sp. DAB_AL60]
gi|380861024|gb|AFF18226.1| truncated hypothetical protein, Sel1 domain protein [Psychrobacter
sp. DAB_AL60]
Length = 346
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
QY+LG D + +A + KA +Q H A Y L +Y G + +D+ A+
Sbjct: 78 QYDLGVMYEKGRDVRKDYTKAIEWYTKAAEQGHSDAQYHLAVMYKKGQGIAQDMTKAIEW 137
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAK 244
+ +A+E+GH+ A G + +G VP+ +TK + AA+++ + + L E+
Sbjct: 138 YTKAAEQGHSDAQYNLGDMYEKGQGVPQDITKALELYLEAAEQSHVDSQETLFCKYEEGN 197
Query: 245 EQFE-------------VAAQAGCNLGLRWLQRIEEE 268
F A+ G N + WL +I E+
Sbjct: 198 SFFNHYLYGPKSHYFFLETAKRGYNRAVEWLIKIAEQ 234
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGAL--------------- 161
A +G DAQY LG ++ + + +A + KA +Q + AL
Sbjct: 16 AELGHSDAQYNLGDMYKLGDGVPRDSHKAVEWYTKAAEQGNSKALEWFKRMDQRNIEQRV 75
Query: 162 ---YLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN 218
Y LG +Y G V+KD A+ + +A+E+GH+ A + +G + + +TK
Sbjct: 76 REQYDLGVMYEKGRDVRKDYTKAIEWYTKAAEQGHSDAQYHLAVMYKKGQGIAQDMTKAI 135
Query: 219 AKRVSAAKKARANLESNLMNPVEKAK 244
AA++ ++ + NL + EK +
Sbjct: 136 EWYTKAAEQGHSDAQYNLGDMYEKGQ 161
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY L + Q +A + KA +Q H A Y LG +Y G V
Sbjct: 105 AAEQGHSDAQYHLAVMYKKGQGIAQDMTKAIEWYTKAAEQGHSDAQYNLGDMYEKGQGVP 164
Query: 176 KDIASALWCFHRASEKGH 193
+DI AL + A+E+ H
Sbjct: 165 QDITKALELYLEAAEQSH 182
>gi|349610788|ref|ZP_08890114.1| hypothetical protein HMPREF1028_02089, partial [Neisseria sp.
GT4A_CT1]
gi|348615607|gb|EGY65119.1| hypothetical protein HMPREF1028_02089 [Neisseria sp. GT4A_CT1]
Length = 454
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY LG Q D QA + KA +Q A Y LG Y G V+
Sbjct: 74 AAEQGLADAQYNLGVMYANGQGVRQDDAQAVQWYRKAAEQGIAKAQYKLGVAYTNGRGVR 133
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D+ A+ F +A+E+GHA A G + G V + T+ AA++ A + N
Sbjct: 134 QDLVQAVQWFGKAAEQGHAKAQYNLGVMYANGQGVRQGYTQAVQWYRKAAEQGDAKAQYN 193
Query: 236 L 236
L
Sbjct: 194 L 194
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 58/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY LG E Q QA ++ KA +Q A Y LG +Y G V+
Sbjct: 182 AAEQGDAKAQYNLGVMYDNERGVRQDYAQAVHWYRKAAEQGIAQAQYNLGVMYEKGLGVR 241
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+G A A G + G V + + AA++ AN +SN
Sbjct: 242 QDDAQAVQWYRKAAEQGIAEAQYNLGVMYKEGRGVRQDDAQAVQWYRKAAEQGLANAQSN 301
Query: 236 L 236
L
Sbjct: 302 L 302
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG + Q D QA + KA +Q A LG Y G V+
Sbjct: 254 AAEQGIAEAQYNLGVMYKEGRGVRQDDAQAVQWYRKAAEQGLANAQSNLGVAYTNGQGVR 313
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+G A A G + G V + + AAK+ A + N
Sbjct: 314 QDYAQAVQWYRKAAEQGLADAQSNLGVMYKEGRGVRQDDAQAVQWYRKAAKQGDAEAQYN 373
Query: 236 L 236
L
Sbjct: 374 L 374
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q D QA + KA +Q A Y LG +Y G V+
Sbjct: 218 AAEQGIAQAQYNLGVMYEKGLGVRQDDAQAVQWYRKAAEQGIAEAQYNLGVMYKEGRGVR 277
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+G A A G G V + + AA++ A+ +SN
Sbjct: 278 QDDAQAVQWYRKAAEQGLANAQSNLGVAYTNGQGVRQDYAQAVQWYRKAAEQGLADAQSN 337
Query: 236 L 236
L
Sbjct: 338 L 338
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ LG + Q D QA + KA Q A Y LG +Y+ G V+
Sbjct: 326 AAEQGLADAQSNLGVMYKEGRGVRQDDAQAVQWYRKAAKQGDAEAQYNLGGMYVQGRGVR 385
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A A+ + +A+E+G A A G + +G V +
Sbjct: 386 QDDAQAVQWYRKAAEQGLAEAQYNLGVMYAKGEGVRQ 422
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQ+ LG V DY+Q A ++ KA +Q + A + LG +Y TG
Sbjct: 2 AAEQGIAKAQFNLGFMYNNGQGVRQDYMQ----AVHWYRKAAEQGNVNAQFNLGVMYDTG 57
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V++D A A+ + +A+E+G A A G + G V +
Sbjct: 58 QGVRQDYAQAVQWYRKAAEQGLADAQYNLGVMYANGQGVRQ 98
>gi|22126207|ref|NP_669630.1| hypothetical protein y2322 [Yersinia pestis KIM10+]
gi|108807367|ref|YP_651283.1| hypothetical protein YPA_1371 [Yersinia pestis Antiqua]
gi|108811632|ref|YP_647399.1| hypothetical protein YPN_1469 [Yersinia pestis Nepal516]
gi|149366080|ref|ZP_01888115.1| putative exported protein [Yersinia pestis CA88-4125]
gi|165926483|ref|ZP_02222315.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165938901|ref|ZP_02227455.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009423|ref|ZP_02230321.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210791|ref|ZP_02236826.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401377|ref|ZP_02306874.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420429|ref|ZP_02312182.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424508|ref|ZP_02316261.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167466848|ref|ZP_02331552.1| hypothetical protein YpesF_02910 [Yersinia pestis FV-1]
gi|218929099|ref|YP_002346974.1| hypothetical protein YPO1989 [Yersinia pestis CO92]
gi|229897397|ref|ZP_04512553.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229898040|ref|ZP_04513191.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901910|ref|ZP_04517031.1| putative exported protein [Yersinia pestis Nepal516]
gi|294503939|ref|YP_003568001.1| hypothetical protein YPZ3_1829 [Yersinia pestis Z176003]
gi|384122344|ref|YP_005504964.1| hypothetical protein YPD4_1753 [Yersinia pestis D106004]
gi|384126257|ref|YP_005508871.1| hypothetical protein YPD8_1795 [Yersinia pestis D182038]
gi|384140187|ref|YP_005522889.1| hypothetical protein A1122_16240 [Yersinia pestis A1122]
gi|384414832|ref|YP_005624194.1| hypothetical protein YPC_2333 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420546877|ref|ZP_15044820.1| MORN repeat variant family protein [Yersinia pestis PY-01]
gi|420552175|ref|ZP_15049552.1| MORN repeat variant family protein [Yersinia pestis PY-02]
gi|420557689|ref|ZP_15054405.1| MORN repeat variant family protein [Yersinia pestis PY-03]
gi|420563198|ref|ZP_15059273.1| MORN repeat variant family protein [Yersinia pestis PY-04]
gi|420568240|ref|ZP_15063851.1| MORN repeat variant family protein [Yersinia pestis PY-05]
gi|420571475|ref|ZP_15066801.1| MORN repeat variant family protein [Yersinia pestis PY-06]
gi|420579241|ref|ZP_15073827.1| MORN repeat variant family protein [Yersinia pestis PY-07]
gi|420584554|ref|ZP_15078645.1| MORN repeat variant family protein [Yersinia pestis PY-08]
gi|420589682|ref|ZP_15083258.1| MORN repeat variant family protein [Yersinia pestis PY-09]
gi|420595083|ref|ZP_15088126.1| MORN repeat variant family protein [Yersinia pestis PY-10]
gi|420600729|ref|ZP_15093158.1| MORN repeat variant family protein [Yersinia pestis PY-11]
gi|420606167|ref|ZP_15098044.1| MORN repeat variant family protein [Yersinia pestis PY-12]
gi|420611559|ref|ZP_15102905.1| MORN repeat variant family protein [Yersinia pestis PY-13]
gi|420622274|ref|ZP_15112386.1| MORN repeat variant family protein [Yersinia pestis PY-15]
gi|420627340|ref|ZP_15116979.1| MORN repeat variant family protein [Yersinia pestis PY-16]
gi|420632426|ref|ZP_15121563.1| MORN repeat variant family protein [Yersinia pestis PY-19]
gi|420637637|ref|ZP_15126234.1| MORN repeat variant family protein [Yersinia pestis PY-25]
gi|420643195|ref|ZP_15131281.1| MORN repeat variant family protein [Yersinia pestis PY-29]
gi|420648386|ref|ZP_15135999.1| MORN repeat variant family protein [Yersinia pestis PY-32]
gi|420654041|ref|ZP_15141083.1| MORN repeat variant family protein [Yersinia pestis PY-34]
gi|420659507|ref|ZP_15145993.1| MORN repeat variant family protein [Yersinia pestis PY-36]
gi|420664851|ref|ZP_15150779.1| MORN repeat variant family protein [Yersinia pestis PY-42]
gi|420669752|ref|ZP_15155232.1| MORN repeat variant family protein [Yersinia pestis PY-45]
gi|420675074|ref|ZP_15160070.1| MORN repeat variant family protein [Yersinia pestis PY-46]
gi|420680667|ref|ZP_15165136.1| MORN repeat variant family protein [Yersinia pestis PY-47]
gi|420685947|ref|ZP_15169853.1| MORN repeat variant family protein [Yersinia pestis PY-48]
gi|420691144|ref|ZP_15174442.1| MORN repeat variant family protein [Yersinia pestis PY-52]
gi|420708234|ref|ZP_15188962.1| MORN repeat variant family protein [Yersinia pestis PY-55]
gi|420713606|ref|ZP_15193767.1| MORN repeat variant family protein [Yersinia pestis PY-56]
gi|420724600|ref|ZP_15203318.1| MORN repeat variant family protein [Yersinia pestis PY-59]
gi|420730216|ref|ZP_15208343.1| MORN repeat variant family protein [Yersinia pestis PY-60]
gi|420735237|ref|ZP_15212888.1| MORN repeat variant family protein [Yersinia pestis PY-61]
gi|420740713|ref|ZP_15217816.1| MORN repeat variant family protein [Yersinia pestis PY-63]
gi|420746231|ref|ZP_15222575.1| MORN repeat variant family protein [Yersinia pestis PY-64]
gi|420751850|ref|ZP_15227478.1| MORN repeat variant family protein [Yersinia pestis PY-65]
gi|420762920|ref|ZP_15236777.1| MORN repeat variant family protein [Yersinia pestis PY-71]
gi|420768085|ref|ZP_15241429.1| MORN repeat variant family protein [Yersinia pestis PY-72]
gi|420773134|ref|ZP_15245975.1| MORN repeat variant family protein [Yersinia pestis PY-76]
gi|420778664|ref|ZP_15250876.1| MORN repeat variant family protein [Yersinia pestis PY-88]
gi|420784247|ref|ZP_15255766.1| MORN repeat variant family protein [Yersinia pestis PY-89]
gi|420789487|ref|ZP_15260428.1| MORN repeat variant family protein [Yersinia pestis PY-90]
gi|420794988|ref|ZP_15265382.1| MORN repeat variant family protein [Yersinia pestis PY-91]
gi|420800041|ref|ZP_15269919.1| MORN repeat variant family protein [Yersinia pestis PY-92]
gi|420805431|ref|ZP_15274788.1| MORN repeat variant family protein [Yersinia pestis PY-93]
gi|420810774|ref|ZP_15279612.1| MORN repeat variant family protein [Yersinia pestis PY-94]
gi|420816318|ref|ZP_15284594.1| MORN repeat variant family protein [Yersinia pestis PY-95]
gi|420821585|ref|ZP_15289344.1| MORN repeat variant family protein [Yersinia pestis PY-96]
gi|420826681|ref|ZP_15293909.1| MORN repeat variant family protein [Yersinia pestis PY-98]
gi|420832402|ref|ZP_15299078.1| MORN repeat variant family protein [Yersinia pestis PY-99]
gi|420837253|ref|ZP_15303462.1| MORN repeat variant family protein [Yersinia pestis PY-100]
gi|420842424|ref|ZP_15308148.1| MORN repeat variant family protein [Yersinia pestis PY-101]
gi|420848069|ref|ZP_15313230.1| MORN repeat variant family protein [Yersinia pestis PY-102]
gi|420858925|ref|ZP_15322615.1| MORN repeat variant family protein [Yersinia pestis PY-113]
gi|421763474|ref|ZP_16200269.1| hypothetical protein INS_10362 [Yersinia pestis INS]
gi|21959174|gb|AAM85881.1|AE013834_6 hypothetical [Yersinia pestis KIM10+]
gi|108775280|gb|ABG17799.1| hypothetical protein YPN_1469 [Yersinia pestis Nepal516]
gi|108779280|gb|ABG13338.1| hypothetical protein YPA_1371 [Yersinia pestis Antiqua]
gi|115347710|emb|CAL20625.1| putative exported protein [Yersinia pestis CO92]
gi|149292493|gb|EDM42567.1| putative exported protein [Yersinia pestis CA88-4125]
gi|165913264|gb|EDR31887.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921704|gb|EDR38901.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991978|gb|EDR44279.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207971|gb|EDR52451.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962124|gb|EDR58145.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167049073|gb|EDR60481.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056390|gb|EDR66159.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229680806|gb|EEO76901.1| putative exported protein [Yersinia pestis Nepal516]
gi|229689081|gb|EEO81146.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229693734|gb|EEO83783.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|262361940|gb|ACY58661.1| hypothetical protein YPD4_1753 [Yersinia pestis D106004]
gi|262365921|gb|ACY62478.1| hypothetical protein YPD8_1795 [Yersinia pestis D182038]
gi|294354398|gb|ADE64739.1| hypothetical protein YPZ3_1829 [Yersinia pestis Z176003]
gi|320015336|gb|ADV98907.1| putative exported protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342855316|gb|AEL73869.1| hypothetical protein A1122_16240 [Yersinia pestis A1122]
gi|391426435|gb|EIQ88616.1| MORN repeat variant family protein [Yersinia pestis PY-01]
gi|391428125|gb|EIQ90135.1| MORN repeat variant family protein [Yersinia pestis PY-02]
gi|391429398|gb|EIQ91254.1| MORN repeat variant family protein [Yersinia pestis PY-03]
gi|391441946|gb|EIR02385.1| MORN repeat variant family protein [Yersinia pestis PY-04]
gi|391443618|gb|EIR03913.1| MORN repeat variant family protein [Yersinia pestis PY-05]
gi|391452176|gb|EIR11607.1| MORN repeat variant family protein [Yersinia pestis PY-06]
gi|391459078|gb|EIR17885.1| MORN repeat variant family protein [Yersinia pestis PY-07]
gi|391460124|gb|EIR18851.1| MORN repeat variant family protein [Yersinia pestis PY-08]
gi|391462348|gb|EIR20869.1| MORN repeat variant family protein [Yersinia pestis PY-09]
gi|391475130|gb|EIR32356.1| MORN repeat variant family protein [Yersinia pestis PY-10]
gi|391476917|gb|EIR33996.1| MORN repeat variant family protein [Yersinia pestis PY-11]
gi|391477290|gb|EIR34326.1| MORN repeat variant family protein [Yersinia pestis PY-12]
gi|391490939|gb|EIR46544.1| MORN repeat variant family protein [Yersinia pestis PY-13]
gi|391492069|gb|EIR47572.1| MORN repeat variant family protein [Yersinia pestis PY-15]
gi|391506661|gb|EIR60562.1| MORN repeat variant family protein [Yersinia pestis PY-16]
gi|391507551|gb|EIR61370.1| MORN repeat variant family protein [Yersinia pestis PY-19]
gi|391511867|gb|EIR65234.1| MORN repeat variant family protein [Yersinia pestis PY-25]
gi|391522306|gb|EIR74701.1| MORN repeat variant family protein [Yersinia pestis PY-29]
gi|391524860|gb|EIR77038.1| MORN repeat variant family protein [Yersinia pestis PY-34]
gi|391525942|gb|EIR78033.1| MORN repeat variant family protein [Yersinia pestis PY-32]
gi|391537884|gb|EIR88730.1| MORN repeat variant family protein [Yersinia pestis PY-36]
gi|391540548|gb|EIR91166.1| MORN repeat variant family protein [Yersinia pestis PY-42]
gi|391542426|gb|EIR92884.1| MORN repeat variant family protein [Yersinia pestis PY-45]
gi|391555759|gb|EIS04898.1| MORN repeat variant family protein [Yersinia pestis PY-46]
gi|391556180|gb|EIS05278.1| MORN repeat variant family protein [Yersinia pestis PY-47]
gi|391557563|gb|EIS06547.1| MORN repeat variant family protein [Yersinia pestis PY-48]
gi|391571065|gb|EIS18466.1| MORN repeat variant family protein [Yersinia pestis PY-52]
gi|391583990|gb|EIS29580.1| MORN repeat variant family protein [Yersinia pestis PY-55]
gi|391587068|gb|EIS32283.1| MORN repeat variant family protein [Yersinia pestis PY-56]
gi|391600400|gb|EIS43932.1| MORN repeat variant family protein [Yersinia pestis PY-60]
gi|391602087|gb|EIS45422.1| MORN repeat variant family protein [Yersinia pestis PY-59]
gi|391614982|gb|EIS56795.1| MORN repeat variant family protein [Yersinia pestis PY-61]
gi|391615639|gb|EIS57382.1| MORN repeat variant family protein [Yersinia pestis PY-63]
gi|391620767|gb|EIS61888.1| MORN repeat variant family protein [Yersinia pestis PY-64]
gi|391627155|gb|EIS67394.1| MORN repeat variant family protein [Yersinia pestis PY-65]
gi|391638411|gb|EIS77218.1| MORN repeat variant family protein [Yersinia pestis PY-71]
gi|391640885|gb|EIS79374.1| MORN repeat variant family protein [Yersinia pestis PY-72]
gi|391650413|gb|EIS87696.1| MORN repeat variant family protein [Yersinia pestis PY-76]
gi|391655057|gb|EIS91835.1| MORN repeat variant family protein [Yersinia pestis PY-88]
gi|391659608|gb|EIS95871.1| MORN repeat variant family protein [Yersinia pestis PY-89]
gi|391663482|gb|EIS99318.1| MORN repeat variant family protein [Yersinia pestis PY-90]
gi|391670819|gb|EIT05819.1| MORN repeat variant family protein [Yersinia pestis PY-91]
gi|391680861|gb|EIT14871.1| MORN repeat variant family protein [Yersinia pestis PY-93]
gi|391682352|gb|EIT16237.1| MORN repeat variant family protein [Yersinia pestis PY-92]
gi|391683024|gb|EIT16836.1| MORN repeat variant family protein [Yersinia pestis PY-94]
gi|391694775|gb|EIT27404.1| MORN repeat variant family protein [Yersinia pestis PY-95]
gi|391698199|gb|EIT30524.1| MORN repeat variant family protein [Yersinia pestis PY-96]
gi|391699543|gb|EIT31726.1| MORN repeat variant family protein [Yersinia pestis PY-98]
gi|391709421|gb|EIT40600.1| MORN repeat variant family protein [Yersinia pestis PY-99]
gi|391715550|gb|EIT46076.1| MORN repeat variant family protein [Yersinia pestis PY-100]
gi|391716261|gb|EIT46723.1| MORN repeat variant family protein [Yersinia pestis PY-101]
gi|391727707|gb|EIT56890.1| MORN repeat variant family protein [Yersinia pestis PY-102]
gi|391735121|gb|EIT63311.1| MORN repeat variant family protein [Yersinia pestis PY-113]
gi|411176375|gb|EKS46395.1| hypothetical protein INS_10362 [Yersinia pestis INS]
Length = 720
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 58 ELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
E NDR L T N E+ + + N +S +H + + + A
Sbjct: 506 EFNDRTGRLLTTTPYVNNEIQVTGETYNADG---VSIIHCYINNKSIDSLYNPIEIREKA 562
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ D +AQYELG DY + ++EK+ D + AL+LL +Y GD VK+D
Sbjct: 563 SQSDDNAQYELGKYHYTCQDY----DRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKED 618
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL- 236
+A++ G + A + G L L G V + L + + AA++ + NL
Sbjct: 619 QTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLG 678
Query: 237 ---------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIE 266
++KAK F VAA++G L+++E
Sbjct: 679 WIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLE 717
>gi|270156775|ref|ZP_06185432.1| TPR repeat family protein [Legionella longbeachae D-4968]
gi|289164776|ref|YP_003454914.1| Sel1 repeat protein [Legionella longbeachae NSW150]
gi|269988800|gb|EEZ95054.1| TPR repeat family protein [Legionella longbeachae D-4968]
gi|288857949|emb|CBJ11809.1| putative Sel1 repeat protein [Legionella longbeachae NSW150]
Length = 376
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD A+Y LG + V Q DQ AFY+ +A +Q HP A L YL G V
Sbjct: 186 AAEQGDAKAEYSLGLLYTGQQPGVGQDDQAAFYWFSQAANQGHPRAQTYLAYYYLKGYGV 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ D A + + A++ G + A + G LLL G V
Sbjct: 246 EADPQKAAYWYQVAAQNGQSEAQVEIGQLLLTGTGV 281
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 63 RLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKY----------HVPGACKAMGAAL 112
R+ + +N E AL+ + Y L++L L + + P A K
Sbjct: 56 RMFQYGQGVSKNHEEALKWYQKSAEKNYPLAQLSLGFMYDLGEGVKQNFPEAFK-----W 110
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTG 171
+ +A G+ AQ + + D VQ++++ AF + EK+ Q + A L Y+ G
Sbjct: 111 YMKSAQQGNAIAQRNIAL-MYSTGDGVQANKKMAFDWFEKSAKQGYSKAQVNLAYDYIMG 169
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ 209
+ KKD+ A + + +A+E+G A A + G LL G Q
Sbjct: 170 EGTKKDVNKAFYWYQKAAEQGDAKAEYSLG-LLYTGQQ 206
>gi|427428374|ref|ZP_18918415.1| hypothetical protein C882_4126 [Caenispirillum salinarum AK4]
gi|425882107|gb|EKV30789.1| hypothetical protein C882_4126 [Caenispirillum salinarum AK4]
Length = 920
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR----VEN 136
A N A+ L +L VPG + G ALL DAA GD A LG R VE
Sbjct: 496 AQAGNVTAKTKLGAAYLDGTVPGGSPSRGVALLEDAATAGDDYAMVVLGRAYRKGTGVET 555
Query: 137 DYVQSD--------------QQAF---YY----------IEKAVDQLHPGALYLLGTVYL 169
D Q++ Q A Y+ I KA + H G++ LG YL
Sbjct: 556 DLAQAEYWLNKAKAAGHPSAQDALARTYFARAEGGSIGEIRKAAEMGHAGSMADLGRAYL 615
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G V++ A +AS +GHAGAA G + L G V
Sbjct: 616 AGQGVERSPQQAERWLKKASAEGHAGAAATLGRMYLEGDGV 656
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 87 HARYWLSKLHLKYHVPGA---------CKAMGAAL--LVDAANMGDPDAQYELGCRLRVE 135
A YWL+K H P A +A G ++ + AA MG + +LG
Sbjct: 559 QAEYWLNKAKAAGH-PSAQDALARTYFARAEGGSIGEIRKAAEMGHAGSMADLGRAYLAG 617
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+S QQA +++KA + H GA LG +YL GD V +D + A +GHAG
Sbjct: 618 QGVERSPQQAERWLKKASAEGHAGAAATLGRMYLEGDGVTRDPQQGVDFLKTAVARGHAG 677
Query: 196 AAIAYGSLLLRGVQVP 211
A G +LL G VP
Sbjct: 678 ARGDLGEVLLTGNGVP 693
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 5/169 (2%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A+L AA G+P A LG Q +QA ++ +A + A+ LG L
Sbjct: 738 AILTAAAEAGEPYAAQLLGESYLEGRGLEQDPEQARKWLARAAEAGQASAMNELGRALLR 797
Query: 171 GD-CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
G+ + +D A A+E+GHAGA G LRG V E K SAA++
Sbjct: 798 GENGIPQDTARGAELLRAAAEQGHAGAQTTLGREYLRGRYVEENRPKAVEYFFSAARQGH 857
Query: 230 ANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLTESSR 278
+ L KA Q +A L WL ++ E + R+ ++ R
Sbjct: 858 PSARLALA----KAYLQANGLPRANQEQALLWLNQVMESDSRIALQTLR 902
>gi|420616899|ref|ZP_15107605.1| sel1 repeat family protein [Yersinia pestis PY-14]
gi|391494344|gb|EIR49584.1| sel1 repeat family protein [Yersinia pestis PY-14]
Length = 228
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 58 ELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
E NDR L T N E+ + + N +S +H + + + A
Sbjct: 14 EFNDRTGRLLTTTPYVNNEIQVTGETYNADG---VSIIHCYINNKSIDSLYNPIEIREKA 70
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ D +AQYELG DY + ++EK+ D + AL+LL +Y GD VK+D
Sbjct: 71 SQSDDNAQYELGKYHYTCQDY----DRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKED 126
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL- 236
+A++ G + A + G L L G V + L + + AA++ + NL
Sbjct: 127 QTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLG 186
Query: 237 ---------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIE 266
++KAK F VAA++G L+++E
Sbjct: 187 WIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLE 225
>gi|220905150|ref|YP_002480462.1| Sel1 domain-containing protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869449|gb|ACL49784.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 346
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 96 HLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAV 153
+L H G K AA+ AAN G AQY LG QSD +A ++ EKA
Sbjct: 142 YLYAHGRGVSKDEAAAIDWYSRAANQGLASAQYSLGWTYLNSKGENQSDTKAAHWFEKAA 201
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+Q HP A L +Y G +D A A+ + RA+E+G+A A G + +G VP+
Sbjct: 202 EQDHPKAQNNLAFMYAEGRGYAQDPAKAVQWYTRAAEQGYAEAQYNLGFMYEQGRGVPQ 260
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
+NDY +A ++ VD + ALY++G + L G VKK+ A F A+EKG
Sbjct: 43 KNDY----DEAVRLLKPLVDGGNAEALYVMGRLILDGKGVKKNRTRAAEFFRLAAEKGDV 98
Query: 195 GAAIAYGSLLLRGVQVP 211
A ++ + L G VP
Sbjct: 99 SAMNSWATALASGDGVP 115
>gi|270490908|ref|ZP_06207982.1| hypothetical protein YPD27_4517 [Yersinia pestis KIM D27]
gi|270339412|gb|EFA50189.1| hypothetical protein YPD27_4517 [Yersinia pestis KIM D27]
Length = 715
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 58 ELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
E NDR L T N E+ + + N +S +H + + + A
Sbjct: 501 EFNDRTGRLLTTTPYVNNEIQVTGETYNADG---VSIIHCYINNKSIDSLYNPIEIREKA 557
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ D +AQYELG DY + ++EK+ D + AL+LL +Y GD VK+D
Sbjct: 558 SQSDDNAQYELGKYHYTCQDY----DRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKED 613
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL- 236
+A++ G + A + G L L G V + L + + AA++ + NL
Sbjct: 614 QTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLG 673
Query: 237 ---------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIE 266
++KAK F VAA++G L+++E
Sbjct: 674 WIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLE 712
>gi|397677034|ref|YP_006518572.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397723|gb|AFN57050.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 315
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ DAQ LG + ++DQ+A ++++KA DQ P A LG VY TGD
Sbjct: 119 AADQGNLDAQTLLGAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAV 178
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
++I A+ + +A+E A G G ++P+ K
Sbjct: 179 RNIEKAISWYQKAAEGNSVTAQAHLGMAYHEGTKLPKNYEK 219
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 113 LVDAANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
L AA+ G+ DA+ ++ + +DY + ++++KA DQ H A LLG Y
Sbjct: 44 LQKAADQGNADAEAKVSFGYFRGKTLPHDYAK----GIFWLQKAADQGHSDAETLLGNAY 99
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G + K+ A++ + +A+++G+ A G+ G VP+
Sbjct: 100 QQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPK 143
>gi|384411620|ref|YP_005620985.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931994|gb|AEH62534.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 202
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ+ G + ++A ++ +KA DQ + A Y LG Y G V +
Sbjct: 42 AEAGDAAAQFVFGFAYSQGKGVARDYEKAVFWWQKAADQGNAKAQYALGVAYANGMGVAQ 101
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A++ + +A+++GHA A GS +G VP+ K AA + A+ + NL
Sbjct: 102 DYEKAVFWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWYQKAANQGDADAQYNL 161
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ AQY LG Q ++A ++ +KA DQ H A Y LG+ Y G V
Sbjct: 77 AADQGNAKAQYALGVAYANGMGVAQDYEKAVFWYQKAADQGHAAAQYDLGSAYYQGAGVP 136
Query: 176 KDIASALWCFHRASEKGHAGA----AIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+ A++ + +A+ +G A A +AY +GV + + + ++ AA K A
Sbjct: 137 QGYEKAVFWYQKAANQGDADAQYNLGVAY--YFGQGVVQDKGIARFWFQQ--AADKGEAK 192
Query: 232 LESNL 236
+ NL
Sbjct: 193 AKENL 197
>gi|260753384|ref|YP_003226277.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|384411703|ref|YP_005621068.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|258552747|gb|ACV75693.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|335932077|gb|AEH62617.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 315
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ DAQ LG + ++DQ+A ++++KA DQ P A LG VY TGD
Sbjct: 119 AADQGNLDAQTLLGAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAV 178
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
++I A+ + +A+E A G G ++P+ K
Sbjct: 179 RNIEKAISWYQKAAEGNSVTAQAHLGMAYHEGTKLPKNYEK 219
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 113 LVDAANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
L AA+ G+ DA+ ++G + +DY + ++++KA DQ H A LLG Y
Sbjct: 44 LQKAADQGNADAEAKVGFGYFRGKTLPHDYAK----GIFWLQKAADQGHSDAETLLGNAY 99
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G + K+ A++ + +A+++G+ A G+ G VP+
Sbjct: 100 QQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPK 143
>gi|46446345|ref|YP_007710.1| hypothetical protein pc0711 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399986|emb|CAF23435.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 412
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 67 LLKTAKENFE-LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQ 125
+ ++ +E F+ L AD + A Y L ++ + K AA+ GD AQ
Sbjct: 126 VTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGCGVTQSKQEAFKYFKFAADQGDATAQ 185
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y+LG + +S+Q+AF Y + A DQ H A Y LG +Y G CV A +
Sbjct: 186 YKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGIIYGYGRCVTNSEQEAFKYY 245
Query: 186 HRASEKGHA------GAAIAYG 201
A+++GH G AYG
Sbjct: 246 KLAADQGHVMAQYSLGLTYAYG 267
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G DAQY LG + D +QS Q+AF Y + A DQ H A Y +G +Y G V
Sbjct: 320 AADQGYADAQYYLGIIYDKKRDAIQSKQEAFKYFKLAADQGHADAQYFVGMMYQKGRGVS 379
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLR 206
A+ + A+++G AA S++ R
Sbjct: 380 PSEEGAIKYYKLAAKQGDTMAASKINSIISR 410
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQY+LG S+Q+AF Y + A DQ H A Y LG Y G VK
Sbjct: 212 AADQGHATAQYKLGIIYGYGRCVTNSEQEAFKYYKLAADQGHVMAQYSLGLTYAYGWGVK 271
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ A F A+++GHA A G G V
Sbjct: 272 QSKQEAFKYFKLAADQGHAKAQYQLGDTYKNGRGV 306
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A+ GD AQY+LG QS Q+ F Y + A DQ H A Y LG +Y G V +
Sbjct: 105 ADQGDTKAQYKLGLMYDEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGCGVTQ 164
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
A F A+++G A A G++ G V
Sbjct: 165 SKQEAFKYFKFAADQGDATAQYKLGAMYDEGSGV 198
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQY LG QS Q+AF Y + A DQ H A Y LG Y G VK
Sbjct: 248 AADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYFKLAADQGHAKAQYQLGDTYKNGRGVK 307
Query: 176 KDIASALWCFHRASEKGHAGA 196
+ A+ + A+++G+A A
Sbjct: 308 RSKQEAIKYYKLAADQGYADA 328
>gi|294661164|ref|YP_003573039.1| hypothetical protein Aasi_1584 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336314|gb|ACP20911.1| hypothetical protein Aasi_1584 [Candidatus Amoebophilus asiaticus
5a2]
Length = 185
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +AQY LGC ++ +Q+AF + +KA Q + A + LG Y G +
Sbjct: 26 AAKQGDAEAQYILGCMYDDGRGVIKDEQKAFKWYQKAAGQGYAKAQFNLGVSYANGQGIA 85
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +A+E+GH GA G + G+ + +
Sbjct: 86 EDEKKAVEWYQKAAEQGHVGAQYNLGVIYEGGMGIKQ 122
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG + +++A + +KA +Q H GA Y LG +Y G +K
Sbjct: 62 AAGQGYAKAQFNLGVSYANGQGIAEDEKKAVEWYQKAAEQGHVGAQYNLGVIYEGGMGIK 121
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
++ A+ + A+EKG A + + G + + + + +A
Sbjct: 122 QNYKQAVSWYQAATEKGSPIAQASLARMYFNGWGIKKDIKRADA 165
>gi|225024092|ref|ZP_03713284.1| hypothetical protein EIKCOROL_00960 [Eikenella corrodens ATCC
23834]
gi|224943117|gb|EEG24326.1| hypothetical protein EIKCOROL_00960 [Eikenella corrodens ATCC
23834]
Length = 578
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA + D QY LG VE DY Q A Y+ EKA Q HP A LG +Y G
Sbjct: 306 AAAQNNVDGQYSLGVLYNNGEGVEQDYAQ----AHYWYEKAAAQNHPEAQNSLGIMYYAG 361
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V +D A A F +A+ + HA G L G VP+ T+ AA + +
Sbjct: 362 HGVPQDYAQARMWFEKAAAQNHADGQYYLGLLYDNGHGVPQDYTQARMWFEKAAAQNHPD 421
Query: 232 LESNL 236
++NL
Sbjct: 422 AQNNL 426
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AAN G P AQ+ LG QS +QA + KA Q + +LG +Y+ G
Sbjct: 195 LEKAANQGLPQAQFALGDLYESGQGVPQSYRQAHLWYGKAAAQGNSDGQNMLGLLYMQGY 254
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
VK+D A A F +A+ +G+A A I G L G V + T+
Sbjct: 255 GVKQDYAQARTWFEKAAAQGNADAQINLGMLYYNGRGVNQNYTQ 298
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ LG Q+ QA + EKA Q P A LG +Y G V
Sbjct: 414 AAAQNHPDAQNNLGAMYYEGQGVTQNYTQARIWFEKAAAQNLPEAQTFLGNIYKLGQGVP 473
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
++ A + + +A+ +G A A G L G VP+ T+
Sbjct: 474 QNYRQARYWYEKAAFQGFATAQYDLGLLYYEGNGVPKNYTQ 514
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA P+AQ LG + Q QA + EKA Q H Y LG +Y G V
Sbjct: 342 AAAQNHPEAQNSLGIMYYAGHGVPQDYAQARMWFEKAAAQNHADGQYYLGLLYDNGHGVP 401
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
+D A F +A+ + H A G++ G V + T+ R+ K A NL
Sbjct: 402 QDYTQARMWFEKAAAQNHPDAQNNLGAMYYEGQGVTQNYTQ---ARIWFEKAAAQNL 455
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALY 162
A A+ +AN GD + Q LG L V DY QQA +++EKA Q A
Sbjct: 81 AQAKAMFERSANAGDAEGQASLGVMYYQGLGVPQDY----QQAKFWLEKAAAQDQADAQT 136
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
LLG++Y G VK+D A + +A+ + A G + G VP+ +
Sbjct: 137 LLGSLYDNGWGVKQDFVQARAWYEKAAAQNEPAAQNNLGLMYYEGRGVPQDYAR 190
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 65/164 (39%), Gaps = 23/164 (14%)
Query: 71 AKENFELALEADNSN------THARYWLSKLHLKYHVPGACKAMGAAL------------ 112
A + L L DN + T AR W K + H P A +GA
Sbjct: 384 ADGQYYLGLLYDNGHGVPQDYTQARMWFEKAAAQNH-PDAQNNLGAMYYEGQGVTQNYTQ 442
Query: 113 ----LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
AA P+AQ LG ++ Q+ +QA Y+ EKA Q A Y LG +Y
Sbjct: 443 ARIWFEKAAAQNLPEAQTFLGNIYKLGQGVPQNYRQARYWYEKAAFQGFATAQYDLGLLY 502
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G+ V K+ +A+ +G A G++ G+ VP+
Sbjct: 503 YEGNGVPKNYTQTRIWLEKAAVQGLPQAQSDLGAIYELGLGVPK 546
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V+ D+VQ+ +A+Y EKA Q P A LG +Y G V +D A A +A+ +G
Sbjct: 148 VKQDFVQA--RAWY--EKAAAQNEPAAQNNLGLMYYEGRGVPQDYARAKTWLEKAANQGL 203
Query: 194 AGAAIAYGSLLLRGVQVPEC 213
A A G L G VP+
Sbjct: 204 PQAQFALGDLYESGQGVPQS 223
>gi|385327769|ref|YP_005882072.1| hypothetical protein NMBB_0460 [Neisseria meningitidis alpha710]
gi|416168389|ref|ZP_11607944.1| sel1 repeat protein [Neisseria meningitidis OX99.30304]
gi|421547941|ref|ZP_15993972.1| TPR repeat protein, SEL1 subfamily [Neisseria meningitidis NM2781]
gi|308388621|gb|ADO30941.1| hypothetical protein NMBB_0460 [Neisseria meningitidis alpha710]
gi|325130845|gb|EGC53578.1| sel1 repeat protein [Neisseria meningitidis OX99.30304]
gi|402327283|gb|EJU62674.1| TPR repeat protein, SEL1 subfamily [Neisseria meningitidis NM2781]
Length = 342
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG Q D QA KA +Q A + LG +YLTG+ V+
Sbjct: 107 AAEQGDAQAQVLLGVMYDKGEGVRQDDAQAMQRFRKAAEQGDAAAQHNLGLMYLTGEGVR 166
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ F +A+E+G A A G + +G V + + AA++ +A + N
Sbjct: 167 QDYAEAMQWFRKAAEQGIAEAQYNLGVMYHKGAGVRQDYAQAVQWFRKAAERGKAEAQHN 226
Query: 236 L----------MNPVEKAKEQFEVAAQAGC-----NLGLRW 261
L ++A + F AA+ G NLG+R+
Sbjct: 227 LGLMYLTGEGVRRDSKQAAQWFRKAAEQGIVQAQHNLGIRY 267
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 21/147 (14%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY LG Q D +A + +A Q A LLG++Y G V+
Sbjct: 35 AAEQGDAAAQYNLGAMYYKGRGVRQDDTEAVRWYRQAAAQGFAPAQALLGSMYAIGQGVR 94
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+G A A + G + +G V + ++
Sbjct: 95 QDDAEAVKWYRQAAEQGDAQAQVLLGVMYDKGEGVRQD-------------------DAQ 135
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWL 262
M KA EQ + AAQ NLGL +L
Sbjct: 136 AMQRFRKAAEQGDAAAQ--HNLGLMYL 160
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 72 KENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCR 131
+EN + A + D + A+Y L ++ K AA G AQ LG
Sbjct: 30 RENLQAAEQGDAA---AQYNLGAMYYKGRGVRQDDTEAVRWYRQAAAQGFAPAQALLGSM 86
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
+ Q D +A + +A +Q A LLG +Y G+ V++D A A+ F +A+E+
Sbjct: 87 YAIGQGVRQDDAEAVKWYRQAAEQGDAQAQVLLGVMYDKGEGVRQDDAQAMQRFRKAAEQ 146
Query: 192 GHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G A A G + L G V + + AA++ A + NL
Sbjct: 147 GDAAAQHNLGLMYLTGEGVRQDYAEAMQWFRKAAEQGIAEAQYNL 191
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 95 LHLKYHVPGACK---AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEK 151
L + YH + A AA G +AQ+ LG + +QA + K
Sbjct: 191 LGVMYHKGAGVRQDYAQAVQWFRKAAERGKAEAQHNLGLMYLTGEGVRRDSKQAAQWFRK 250
Query: 152 AVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
A +Q A + LG Y G+ V++D A + RA+E+G A A G + L+G V
Sbjct: 251 AAEQGIVQAQHNLGIRYYKGEGVRRDYKQAAQWYRRAAEQGDAVAQHNLGLMYLKGEGVR 310
Query: 212 E 212
+
Sbjct: 311 Q 311
>gi|397664659|ref|YP_006506197.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395128070|emb|CCD06275.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 375
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGAC--KAMGAALLVDAANMGDPDAQYELGCRLRV 134
L+ EAD + A+Y L K++ Y+ G LL+ +AN G+ DAQ L
Sbjct: 43 LSPEADKGDAKAQYLLGKMY--YNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGYYWY 100
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
N + ++AF + +KA DQ + Y LG +Y TG V ++ +A+ + +A+E+G++
Sbjct: 101 LNT-PEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGNS 159
Query: 195 GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLM----------NPVEKAK 244
AA+A G G V + T+ AA A+ + NL +KA
Sbjct: 160 NAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDYQKAA 219
Query: 245 EQFEVAAQAG 254
E FE AA G
Sbjct: 220 EYFEKAANQG 229
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA++G+ AQY LG + + D V D Q+A Y EKA +Q H + LG +Y +G
Sbjct: 189 AADLGNASAQYNLGL-MYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLG 247
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K D+ A + + ++++ G+A A + G V + L
Sbjct: 248 KSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSL 287
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 69/171 (40%), Gaps = 9/171 (5%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLH-LKYHVP-GACKAMGAALLVDAANMGDPDAQ 125
E ++ A E AD +N +Y L ++ VP + AM AA G+ +A
Sbjct: 105 EGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAM--VWYKKAAEQGNSNAA 162
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+G + QA + KA D + A Y LG +Y GD V KD A F
Sbjct: 163 LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYF 222
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A+ +GHA + + G L G L K +A AN + NL
Sbjct: 223 EKAANQGHAKSQLELGYLYDSGKLGKSDLQKAAFWYQKSADLGNANAQFNL 273
>gi|237748058|ref|ZP_04578538.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379420|gb|EEO29511.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 414
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 25/219 (11%)
Query: 88 ARYWLSKLHLKYHVPGAC-------KAMGAA--------LLVDAANMGDPDAQYELGCRL 132
AR+W K K V K +GA L AANMGD +Q + G L
Sbjct: 190 ARFWFEKAAAKNDVRATAALAWLYLKGVGAPIDEKKAAVLFEKAANMGDAYSQDQFGMML 249
Query: 133 RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
++AF +IEKA +Q +P A Y + +YLTG +K+ A+ +A+ G
Sbjct: 250 GQGTGMNAEPEKAFLWIEKAANQQYPVAEYHMAMMYLTGSGTEKNPELAVKWLEKAAFHG 309
Query: 193 HAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE----------SNLMNPVEK 242
+ A Y SLL G + + + + AA+ A + + ++ ++
Sbjct: 310 NVDAQNFYASLLYLGYGIKQDIPRAIGYFTEAAEGGHAESQFLLGTIYVKGNGVLTNLKT 369
Query: 243 AKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLTESSRIET 281
A+ FE A + G L++++E E + + +T
Sbjct: 370 ARNWFEKAEKNGHPDAKAALEKLDEMEGKGRATPEKTDT 408
>gi|348590020|ref|YP_004874482.1| hypothetical protein TASI_0688 [Taylorella asinigenitalis MCE3]
gi|347973924|gb|AEP36459.1| hypothetical protein TASI_0688 [Taylorella asinigenitalis MCE3]
Length = 313
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 54 IDYCELNDRRLIP-LLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL 112
I + E N + I L K+A++NF A+E + Y L +P + G +
Sbjct: 96 IKHIEKNPQEAIKWLTKSAEQNFYPAMET----LYDAYMLGT-----DIPRDTQK-GISY 145
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AN G +AQ+ LG D ++ +A Y+ EKA +Q + A+ L ++Y GD
Sbjct: 146 LEILANQGFDNAQFALGKNYFNGKDIPRNMNKAVYWFEKAANQGNTEAMLYLASIYFVGD 205
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V KD++ + A++KG A A G+L G V L K +A++ A
Sbjct: 206 GVDKDLSKTKYWNENAAKKGLAIAQFNLGTLYYNGHGVDIDLVKAREWYEKSAEQNNALA 265
Query: 233 ESNL 236
++NL
Sbjct: 266 QTNL 269
>gi|350559316|ref|ZP_08928156.1| Sel1 domain protein repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781584|gb|EGZ35867.1| Sel1 domain protein repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A G PDAQY + + V+ + A + A +Q H A + LG +YL G
Sbjct: 29 LLSPLAEAGHPDAQYRVAIMCQNGLGVVRQPETAVAQMRAAAEQGHAMAQHGLGFMYLEG 88
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
DCV KD A A+ F +A+E+G AG+ + +G V
Sbjct: 89 DCVDKDPAQAVGWFEKAAEQGLAGSKTTLAMMYAQGTGV 127
>gi|384260353|ref|YP_005415537.1| TPR repeat SEL1 subfamily [Rhodospirillum photometricum DSM 122]
gi|378401451|emb|CCG06567.1| TPR repeat SEL1 subfamily [Rhodospirillum photometricum DSM 122]
Length = 262
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 116 AANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA+ G+PDA Y +G L + D V D +Y I A D+ A + LGT+Y TG
Sbjct: 100 AADQGEPDAHYNIGMLRSLGLGLPRDPV--DAINWYLI--AADRGSVLAQFRLGTLYATG 155
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV----QVPECLTKLNAKRVSAAKK 227
+ V +D A+ +A+E+GH GA I G L++G+ PE L L++ S K
Sbjct: 156 EGVSQDYTKAVEWSRKAAERGHEGAQINLGRFLMQGLGTEKNFPEALHWLSSAAQSGEKA 215
Query: 228 ARANL 232
A L
Sbjct: 216 AMTAL 220
>gi|254448217|ref|ZP_05061679.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium HTCC5015]
gi|198262084|gb|EDY86367.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium HTCC5015]
Length = 281
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A+ G+ AQ LG + QS ++A Y+ E A + P Y LG +Y G V
Sbjct: 134 SAHQGNASAQNNLGAQYLFGRSVPQSYEKAMYWFEMAAQKGEPTGQYNLGDMYAQGQGVP 193
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A + + +A+++GH A G + ++G VP+ + AK AK A + +N
Sbjct: 194 QSHEQAAYWYKKAAQQGHTPAQNNLGVMYIKGEGVPQSQV-IAAKWFILAKMAGNDKAAN 252
Query: 236 LMNPVEKAKEQFEVA 250
+N V+K E++
Sbjct: 253 NLNRVQKTMTATEIS 267
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+LL A G +AQ+ LG V Q+ ++ Y+ +KA Q A LG YL
Sbjct: 21 SLLEPLAKRGAVEAQFNLGLMYEVGMGITQNHGKSVYWYQKAARQGFAIAQNSLGLAYLN 80
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G+ + A+ F +A+++G+A A GS +G VP+ K + +A + A
Sbjct: 81 GEGTLQSYEKAVHWFEKAAQQGYAVAQYNLGSRYAKGQGVPQSHKKATSWFKKSAHQGNA 140
Query: 231 NLESNL----------MNPVEKAKEQFEVAAQAGCNLG 258
+ ++NL EKA FE+AAQ G G
Sbjct: 141 SAQNNLGAQYLFGRSVPQSYEKAMYWFEMAAQKGEPTG 178
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG R QS ++A + +K+ Q + A LG YL G V
Sbjct: 98 AAQQGYAVAQYNLGSRYAKGQGVPQSHKKATSWFKKSAHQGNASAQNNLGAQYLFGRSVP 157
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A++ F A++KG G + +G VP+ + AA++ ++N
Sbjct: 158 QSYEKAMYWFEMAAQKGEPTGQYNLGDMYAQGQGVPQSHEQAAYWYKKAAQQGHTPAQNN 217
Query: 236 L 236
L
Sbjct: 218 L 218
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 62 RRLIPLLKTAKENFELA---LE--ADNSNTHARYWLSKLHLKYHVP-GACKAMGAALL-- 113
RRL+ + AK+N+E A LE A A++ L L Y V G + G ++
Sbjct: 5 RRLV--RQVAKKNYEKAKSLLEPLAKRGAVEAQF---NLGLMYEVGMGITQNHGKSVYWY 59
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA G AQ LG +QS ++A ++ EKA Q + A Y LG+ Y G
Sbjct: 60 QKAARQGFAIAQNSLGLAYLNGEGTLQSYEKAVHWFEKAAQQGYAVAQYNLGSRYAKGQG 119
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
V + A F +++ +G+A A G+ L G VP+ K AA+K +
Sbjct: 120 VPQSHKKATSWFKKSAHQGNASAQNNLGAQYLFGRSVPQSYEKAMYWFEMAAQKGEPTGQ 179
Query: 234 SNLMN------PVEKAKEQ----FEVAAQAG-----CNLGLRWLQ 263
NL + V ++ EQ ++ AAQ G NLG+ +++
Sbjct: 180 YNLGDMYAQGQGVPQSHEQAAYWYKKAAQQGHTPAQNNLGVMYIK 224
>gi|46446343|ref|YP_007708.1| hypothetical protein pc0709 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399984|emb|CAF23433.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 309
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN DAQY LGC QSDQ A + A +Q H A Y LG +Y+ G V
Sbjct: 140 AANQNYADAQYSLGCMYENGQGVAQSDQNAAQCYQLAANQNHVKAQYNLGVMYMHGQGVA 199
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A + A+++GHA A + G + G V + K AAK+ A+ + N
Sbjct: 200 QSDQEAARYYQLAAKQGHAKAQFSLGFIYAHGKGVEQSDQKAVKYYQRAAKQGNASAQCN 259
Query: 236 L 236
L
Sbjct: 260 L 260
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A+ GD +QY G R QSDQ+AF Y + A +Q + A Y LG +Y G V +
Sbjct: 105 ADQGDAKSQYLFGLRYINGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYENGQGVAQ 164
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A C+ A+ + H A G + + G V + + AAK+ A + +L
Sbjct: 165 SDQNAAQCYQLAANQNHVKAQYNLGVMYMHGQGVAQSDQEAARYYQLAAKQGHAKAQFSL 224
Query: 237 M----------NPVEKAKEQFEVAAQAG-----CNLGLRW 261
+KA + ++ AA+ G CNLG+ +
Sbjct: 225 GFIYAHGKGVEQSDQKAVKYYQRAAKQGNASAQCNLGVMY 264
>gi|373471213|ref|ZP_09562276.1| Sel1 repeat protein [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371760834|gb|EHO49502.1| Sel1 repeat protein [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 609
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
+ A+ N A+ +SK ++ V + L AAN GD +Q LG + + N
Sbjct: 300 FMIAAEEGNVQAQRIISKEYILGEVLKKDYELARLWLEKAANTGDAKSQTTLG-KFYLSN 358
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+++AF EKA +Q + A YLLGT YL + ++KDI AL F +A++KGH
Sbjct: 359 FGNNDEKKAFEMFEKAAEQGYTEAEYLLGTCYLNQNLLEKDIELALLWFDKAAKKGH 415
>gi|325288231|ref|YP_004264412.1| Sel1 domain-containing protein repeat-containing protein
[Syntrophobotulus glycolicus DSM 8271]
gi|324963632|gb|ADY54411.1| Sel1 domain protein repeat-containing protein [Syntrophobotulus
glycolicus DSM 8271]
Length = 958
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 78 ALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVE 135
L A N A Y L KL+L G K + +A+ + AA+ + A+Y LG
Sbjct: 732 TLSAGQDNDFAAYRLGKLYLGGE--GVLKDVESAIRWMTFAADRKNQFAEYALGVLYFKG 789
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
D + +A Y++++ Q + A Y LG +YL G+ V KDI +AL A+E+G+
Sbjct: 790 EDVPKDVPKALEYLKRSAGQGNQFAQYRLGKIYLMGEDVPKDIQTALQFLTAAAEQGNQY 849
Query: 196 AAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLM 237
A G L L G VP+ K A R A+ N+ +
Sbjct: 850 AQYTLGKLYLMGKDVPK--DKETAVRWFTLSAAQGNIYAQFF 889
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHL---KYHVPGACKAMGAALLVDAANMGDPDAQYE 127
AKE FE A A N A + L+KL L K KA+G L A +P A Y
Sbjct: 654 AKEYFEKA--AFVGNPFAYHQLAKLILSDEKAPQQDVEKALG--YLKKAVEAENPYAAYF 709
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
LG Q+ +A + Q + A Y LG +YL G+ V KD+ SA+
Sbjct: 710 LGKLYEKGQHVPQNIAEAIRLYTLSAGQDNDFAAYRLGKLYLGGEGVLKDVESAIRWMTF 769
Query: 188 ASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+++ + A A G L +G VP+ + K
Sbjct: 770 AADRKNQFAEYALGVLYFKGEDVPKDVPK 798
>gi|399154663|ref|ZP_10754730.1| TPR repeat-containing protein [gamma proteobacterium SCGC
AAA007-O20]
Length = 179
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L++ A GD AQ L L +E D V Q D++AFY+++KA Q A+Y LG +Y +G
Sbjct: 6 LIENAEAGDMKAQSSL-AYLYIEGDGVPQDDEKAFYWVKKAAAQEDIYAMYNLGYLYWSG 64
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+D A + F A+EKGH A G++ G V + + AAK+ N
Sbjct: 65 KGTSQDYEKAFFWFSLAAEKGHLPAQNYLGAMYSDGRGVDQDFEEAFIWLSIAAKQNHPN 124
Query: 232 LESNL 236
+ L
Sbjct: 125 AQCRL 129
>gi|237748021|ref|ZP_04578501.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379383|gb|EEO29474.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 294
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
M LL AAN GDP A + LG + ++ +++F + EKA + A +++G+
Sbjct: 44 MALPLLEKAANAGDPQAPFYLGIMFDEGSGVIKDQKKSFEWFEKAAKNGNTDAFFVIGSR 103
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAY---GSLLLRGV 208
YL G V+KD AL + R+ E+G Y GS+ G+
Sbjct: 104 YLYGSGVEKDYKEALKWYKRSVEEGKKDDKTIYFMIGSMYYNGL 147
>gi|297621489|ref|YP_003709626.1| hypothetical protein wcw_1268 [Waddlia chondrophila WSU 86-1044]
gi|297376790|gb|ADI38620.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
gi|337293689|emb|CCB91676.1| uncharacterized protein ybeQ [Waddlia chondrophila 2032/99]
Length = 625
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ LG +QSD +A Y+ +KA ++ +P A YL+ +Y +G ++
Sbjct: 429 AAEKGNSSAQVNLGLLYSQGKGVLQSDDEAVYWYKKAAEKDNPEAFYLMAAMYESGKGLE 488
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK-LNAKRVSAAKKARANLES 234
KD+ A+ + +A+E G A G L G +P+ + + +N R S A+ A+ ++
Sbjct: 489 KDLKKAIEYYQKAAEGGSGIAQNKLGLLYEIGSGLPQNIGEAVNWYRKS-AESGFADGQN 547
Query: 235 NLMNPVEKA---KEQFEVAA 251
NL E+ K FE AA
Sbjct: 548 NLGRMYEQGIGMKVNFEAAA 567
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G+ AQ LG L E + V D + A ++ +A + LY LG VY G V
Sbjct: 321 AAEKGNSAAQNNLGV-LYEEGEGVPKDFKLALFWYSQAAENNDSRGLYNLGRVYEFGKGV 379
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
KD + A + RA+E G+A A + G L ++GV V + AA+K ++ +
Sbjct: 380 PKDPSKAYTYYRRAAELGYAPAQLNLGLLYIKGVGVSQSFKSAADWFQKAAEKGNSSAQV 439
Query: 235 NL 236
NL
Sbjct: 440 NL 441
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+AN G+P Q LG +DQ+AF + +KA DQ A LG +Y G V
Sbjct: 141 SANAGNPYGQINLGRFYENGISVPNNDQKAFQWYKKAADQGMVSAQNSLGRMYQLGKGVD 200
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A + +A+E+G+A A G L G V
Sbjct: 201 QDYGKAKEWYLKAAEEGNAFAQFNLGLLYEEGKGV 235
>gi|319639039|ref|ZP_07993797.1| hypothetical protein HMPREF0604_01421 [Neisseria mucosa C102]
gi|317399943|gb|EFV80606.1| hypothetical protein HMPREF0604_01421 [Neisseria mucosa C102]
Length = 339
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 117 ANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
A G AQY LG V DYVQ A + KA +Q H A LG +Y G
Sbjct: 144 AEQGLAKAQYNLGLSYAQGQGVSQDYVQ----AVRWYRKAAEQGHADAQNNLGVMYDNGK 199
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V++D +A+ + +A+E+GHAGA I G + +G V + K AA++ A
Sbjct: 200 GVRQDYTNAVQWYRKAAEQGHAGAQINLGMMYEKGQGVHQNYAKAVEWYHKAAEQGHAQA 259
Query: 233 ESNL 236
++NL
Sbjct: 260 QNNL 263
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G DAQ LG V DY + Q + KA +Q H GA LG +Y G
Sbjct: 179 AAEQGHADAQNNLGVMYDNGKGVRQDYTNAVQ----WYRKAAEQGHAGAQINLGMMYEKG 234
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V ++ A A+ +H+A+E+GHA A G + G V + + + AA++ A+
Sbjct: 235 QGVHQNYAKAVEWYHKAAEQGHAQAQNNLGVMYDNGQGVRQDYAQAVQWYLKAAEQGYAD 294
Query: 232 LESNLMNPVEKAK 244
+ NL EK +
Sbjct: 295 AQYNLGLMYEKGQ 307
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 54/129 (41%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY LG Q +A + K +Q A Y LG Y G V
Sbjct: 107 AAEQGLADAQYNLGMMYANGQGVRQDYAEAVRWFRKTAEQGLAKAQYNLGLSYAQGQGVS 166
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+GHA A G + G V + T AA++ A + N
Sbjct: 167 QDYVQAVRWYRKAAEQGHADAQNNLGVMYDNGKGVRQDYTNAVQWYRKAAEQGHAGAQIN 226
Query: 236 LMNPVEKAK 244
L EK +
Sbjct: 227 LGMMYEKGQ 235
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 151 KAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+A +Q A Y LG +Y G V+KD A A+ + +A+E+G+A A G + G V
Sbjct: 34 RAAEQGVVAAQYNLGQMYRNGQGVRKDYAEAVKWYRKAAEQGYAQAQYNLGVMYDNGRGV 93
Query: 211 PECLTKLNAKRVSAAKKARANLESNL 236
+ + AA++ A+ + NL
Sbjct: 94 RQDYIQAVQWYRKAAEQGLADAQYNL 119
>gi|399116849|emb|CCG19660.1| conserved hypothetical protein [Taylorella asinigenitalis 14/45]
Length = 299
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 54 IDYCELNDRRLIP-LLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL 112
I + E N + I L K+A++NF A+E + Y L +P + G +
Sbjct: 82 IKHIEKNPQEAIKWLTKSAEQNFYPAMET----LYDAYMLGT-----DIPRDTQK-GISY 131
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AN G +AQ+ LG D ++ +A Y+ EKA +Q + A+ L ++Y GD
Sbjct: 132 LEILANKGFDNAQFALGKNYFNGKDIPRNMNKAVYWFEKAANQGNTEAMLYLASIYFVGD 191
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V KD++ + A++KG A A G+L G V L K +A++ A
Sbjct: 192 GVDKDLSKTKYWNENAAKKGLAIAQFNLGTLYYNGHGVDIDLVKAREWYEKSAEQNNALA 251
Query: 233 ESNL 236
++NL
Sbjct: 252 QTNL 255
>gi|169826234|ref|YP_001696392.1| suppressor of lin-12-like protein (Sel-1L) [Lysinibacillus
sphaericus C3-41]
gi|168990722|gb|ACA38262.1| Suppressor of lin-12-like protein (Sel-1L) [Lysinibacillus
sphaericus C3-41]
Length = 619
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L L A+ + A + L +L++ Y + KA+ L AA G DAQYELG L +
Sbjct: 398 LLLAAEKGHISAGFELGRLYV-YQLHQPDKAL--PYLKAAAEKGYVDAQYELGLLLTAGD 454
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ +A + A DQ H A Y LG VY G V D+ A C+ A+ +GHAGA
Sbjct: 455 GVPVNYPEAVQWWRAATDQSHIQAEYQLGLVYEQGLGVSIDLEEARRCYRLAAIQGHAGA 514
Query: 197 AIAYGSLLLRGVQVPECLTK 216
G+L +G V + T+
Sbjct: 515 QYQLGNLFDKGKGVTQDYTE 534
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY+LG Q +A +IE+A Q H A Y L +++ G V
Sbjct: 506 AAIQGHAGAQYQLGNLFDKGKGVTQDYTEAAKWIEQAAAQEHIKAQYQLAQMHIHGQGVP 565
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
KD A A + A+ +GH A G L +G V +
Sbjct: 566 KDFAKAAQLYRLAANQGHQKAQFQLGLLYKKGQGVAQ 602
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
K A E FE+A A N + A+Y L L+ + A+ AA+ DP+A Y L
Sbjct: 144 KHAAEWFEIA--AQNGDASAQYNLGALYNQGRGVKKDYALAKMWYERAADQNDPNAHYSL 201
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + Q+ +A ++ + A D + A Y LG +Y G + ++ A + A
Sbjct: 202 GVLFHLGQGIEQNYTEAAHHYQIAADLGNADAQYNLGVLYNQGLGMSQNFLEAAKWYTLA 261
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+++G+ A G L G V + + + AA A+ + NL
Sbjct: 262 ADQGNTSAQNNLGFLYHNGTGVEQSYVEASTYFEMAALAGDASAQYNL 309
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++G+ DAQY LG Q+ +A + A DQ + A LG +Y G V+
Sbjct: 225 AADLGNADAQYNLGVLYNQGLGMSQNFLEAAKWYTLAADQGNTSAQNNLGFLYHNGTGVE 284
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ A F A+ G A A G + L+G +P+ T+
Sbjct: 285 QSYVEASTYFEMAALAGDASAQYNLGYMHLKGRGIPQNFTE 325
>gi|407781184|ref|ZP_11128404.1| peptidoglycan-binding domain-containing protein [Oceanibaculum
indicum P24]
gi|407208610|gb|EKE78528.1| peptidoglycan-binding domain-containing protein [Oceanibaculum
indicum P24]
Length = 675
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A L+ A GDP+AQ++L + Q ++A Y+ +A Q PGA Y LG +Y
Sbjct: 396 AGLVEQRARQGDPEAQHDLAVLYATGDGRPQDMREAAYWFREAAIQGVPGAQYNLGVLYE 455
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
G V++D AL +H A+E+ H A G +G +P
Sbjct: 456 KGTGVQQDDVRALLWYHSAAERNHPRAQYNLGLFYAQGRGIP 497
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AA G P AQY LG Q D +A + A ++ HP A Y LG Y G +
Sbjct: 437 EAAIQGVPGAQYNLGVLYEKGTGVQQDDVRALLWYHSAAERNHPRAQYNLGLFYAQGRGI 496
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+ A A RAS++G A G + RG+
Sbjct: 497 PVNYAEARKWLRRASDQGMTPALFELGQMEERGL 530
>gi|423209713|ref|ZP_17196267.1| hypothetical protein HMPREF1169_01785 [Aeromonas veronii AER397]
gi|404617571|gb|EKB14507.1| hypothetical protein HMPREF1169_01785 [Aeromonas veronii AER397]
Length = 531
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA GD AQYELG + R QSD +A Y+ +K+ +Q +P LG +Y G
Sbjct: 13 LIKAAEDGDATAQYELGYKYRRGQGVEQSDIKALYWYQKSAEQDNPFGQNALGGMYHNGW 72
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V++D A + F +++++G G+L L +K AAK+ ++
Sbjct: 73 GVEQDNKKAFYWFTKSAQQGLDIGQFHLGNLYLYNATTKTNDSKAVFWFRKAAKQGNSDA 132
Query: 233 ESNL 236
+ NL
Sbjct: 133 QCNL 136
>gi|338814246|ref|ZP_08626276.1| hypothetical protein ALO_18502 [Acetonema longum DSM 6540]
gi|337273767|gb|EGO62374.1| hypothetical protein ALO_18502 [Acetonema longum DSM 6540]
Length = 707
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A G AA+ G+ ++QYELG ++ Q D ++ + +KA +Q HP A ++LG
Sbjct: 318 AEGVKWWQRAASAGEKESQYELGIAYQLGKGIAQDDVESVKWFQKAAEQGHPDAQHMLGR 377
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
Y G V KD + A +++++G+ A + G L G V
Sbjct: 378 AYYYGKGVPKDYSQAAHWLKQSADQGNGWAQVTLGVLYRNGYGV 421
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 115 DAANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+AA G AQY LG + VE D+ + A + +KAV+Q + A Y LG Y
Sbjct: 149 EAAAQGHGGAQYVLGMAYNDGIGVEQDFTE----AVRWWQKAVEQNYAPAHYPLGLAYAE 204
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
G VKKD +AL + + +EK HA + A G G VP
Sbjct: 205 GHGVKKDHDAALKHWQQGAEKEHARSQFALGGAYAHGYGVP 245
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY LG ++ +A + K+ +Q H Y +G Y+ G+ VK
Sbjct: 78 AAEQGHMDAQYVLGNAAIFGYGMDRNPVEAAKWWRKSAEQGHISGQYTIGNAYMYGEGVK 137
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
KD A+ + A+ +GH GA G G+ V + T+
Sbjct: 138 KDPTEAVRWWKEAAAQGHGGAQYVLGMAYNDGIGVEQDFTE 178
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G +AQ +LG + +A + +KA +Q H + Y LGT Y TG V+
Sbjct: 471 AADQGYLEAQVQLGYMYERGLGATSNLAEAMKWYQKAAEQQHSWSQYYLGTCYETGKGVE 530
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
K+ A A + +A+ G++ A G++ G VP+
Sbjct: 531 KNYAKAFEWYQKAAASGYSSAFAKMGNVYYSGYGVPK 567
>gi|332295410|ref|YP_004437333.1| serine/threonine protein kinase [Thermodesulfobium narugense DSM
14796]
gi|332178513|gb|AEE14202.1| serine/threonine protein kinase [Thermodesulfobium narugense DSM
14796]
Length = 582
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Query: 74 NFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
NF++A + + N A Y L ++L M DA+ G+ DA Y L
Sbjct: 388 NFDIAFKCFREASGKGNVEALYRLGLMYLHGQGTYQDDKMAFKYFKDASEKGNADAMYRL 447
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G Q D+ AF Y + A ++ + A+Y LG +YL G +D A F A
Sbjct: 448 GWMYEYGRGTSQDDKMAFKYFKDASEKGNADAMYHLGLMYLHGQGTYQDDKMAFKYFKDA 507
Query: 189 SEKGHAGAAIAYG 201
SEKG+A A G
Sbjct: 508 SEKGNADAMYRLG 520
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A+ G+ +A Y LG Q D+ AF Y + A ++ + A+Y LG +Y G
Sbjct: 398 EASGKGNVEALYRLGLMYLHGQGTYQDDKMAFKYFKDASEKGNADAMYRLGWMYEYGRGT 457
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A F ASEKG+A A G + L G
Sbjct: 458 SQDDKMAFKYFKDASEKGNADAMYHLGLMYLHG 490
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+++ N DP +E+G + + ++ AF +A + + ALY LG +YL G
Sbjct: 360 ILEIENQEDPKVLFEIGLKYLLGFGVTRNFDIAFKCFREASGKGNVEALYRLGLMYLHGQ 419
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYG 201
+D A F ASEKG+A A G
Sbjct: 420 GTYQDDKMAFKYFKDASEKGNADAMYRLG 448
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
M DA+ G+ DA Y LG Q D+ AF Y + A ++ + A+Y LG +
Sbjct: 463 MAFKYFKDASEKGNADAMYHLGLMYLHGQGTYQDDKMAFKYFKDASEKGNADAMYRLGWM 522
Query: 168 YLTGDCVKKDIASALWCFHRASEKGH 193
Y G +D A + + ++ + G+
Sbjct: 523 YEYGRGTSQDDKMAKYWYEKSKDLGN 548
>gi|343504481|ref|ZP_08742194.1| Sel1 domain-containing protein [Vibrio ichthyoenteri ATCC 700023]
gi|342811471|gb|EGU46509.1| Sel1 domain-containing protein [Vibrio ichthyoenteri ATCC 700023]
Length = 443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY L L ++ Q AF + KA +Q H A Y +G +Y G V+
Sbjct: 238 AAQQGHVEAQYNLAMMLYFGIGTSENKQDAFIWHLKAAEQGHIEAQYNVGMMYDFGLGVE 297
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKR--VSAAKKARANLE 233
+ AL +H A+E GHA A + SL GV P + K A R V AAK+ +
Sbjct: 298 PNKTKALIWYHNAAENGHADAQFSLASLYELGVGTP--VNKKEAYRWYVKAAKQGSVAAQ 355
Query: 234 SNLMNPVEKAK 244
NL +E K
Sbjct: 356 YNLGVMLEAGK 366
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGAC--KAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
A+ N A+Y L+ ++ YH G +AM + AA G AQ +G L
Sbjct: 95 AEQGNVRAQYHLATMY--YHGDGIAENRAMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGV 152
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
++ QQA + KA +Q + A Y + T+ G +D+ +AL+ +++A+E+ H
Sbjct: 153 EENPQQALEWYHKAAEQDNAEAQYNMATMLAYGIGTDEDLGAALYWYYQAAEQNH 207
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 75 FELALEA-DNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR 133
FEL +A + ++ A+Y+L ++ KA + AA G+ AQY L
Sbjct: 52 FELFSQAAKDGHSEAQYYLGHMYYFGETTPVDKAQATRWMEKAAEQGNVRAQYHLATMYY 111
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ ++ AF++ KA +Q H A +G + V+++ AL +H+A+E+ +
Sbjct: 112 HGDGIAENRAMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENPQQALEWYHKAAEQDN 171
Query: 194 AGAAIAYGSLLLRGVQVPECL 214
A A ++L G+ E L
Sbjct: 172 AEAQYNMATMLAYGIGTDEDL 192
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y+LG + N + +AF +A H A Y LG +Y G+ D A A
Sbjct: 32 YDLGVQYYFGNGASINKNKAFELFSQAAKDGHSEAQYYLGHMYYFGETTPVDKAQATRWM 91
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKE 245
+A+E+G+ A ++ G + E + AA++ A + N+ +E A+
Sbjct: 92 EKAAEQGNVRAQYHLATMYYHGDGIAENRAMAFHWYLKAAEQGHAKAQLNVGRMLEFAQG 151
Query: 246 QFEVAAQAGCNLGLRWLQRIEEEE 269
E QA L W + E++
Sbjct: 152 VEENPQQA-----LEWYHKAAEQD 170
>gi|45441640|ref|NP_993179.1| hypothetical protein YP_1836 [Yersinia pestis biovar Microtus str.
91001]
gi|145598429|ref|YP_001162505.1| hypothetical protein YPDSF_1134 [Yersinia pestis Pestoides F]
gi|162421304|ref|YP_001606911.1| hypothetical protein YpAngola_A2494 [Yersinia pestis Angola]
gi|229894696|ref|ZP_04509876.1| putative exported protein [Yersinia pestis Pestoides A]
gi|45436502|gb|AAS62056.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|145210125|gb|ABP39532.1| hypothetical protein YPDSF_1134 [Yersinia pestis Pestoides F]
gi|162354119|gb|ABX88067.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|229702169|gb|EEO90188.1| putative exported protein [Yersinia pestis Pestoides A]
Length = 720
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 17/219 (7%)
Query: 58 ELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
E NDR L T N E+ + N +S +H + + + A
Sbjct: 506 EFNDRTGRLLTTTPYVNNEIQGTGETYNADG---VSIIHCYINNKSIDSLYNPIEIREKA 562
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ D +AQYELG DY + ++EK+ D + AL+LL +Y GD VK+D
Sbjct: 563 SQSDDNAQYELGKYHYTCQDY----DRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKED 618
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL- 236
+A++ G + A + G L L G V + L + + AA++ + NL
Sbjct: 619 QTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLG 678
Query: 237 ---------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIE 266
++KAK F VAA++G L+++E
Sbjct: 679 WIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLE 717
>gi|153948984|ref|YP_001401070.1| hypothetical protein YpsIP31758_2097 [Yersinia pseudotuberculosis
IP 31758]
gi|152960479|gb|ABS47940.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
Length = 720
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 17/219 (7%)
Query: 58 ELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
E NDR L T N E+ + N +S +H + + + A
Sbjct: 506 EFNDRTGRLLTTTPYVNNEIQGTGETYNADG---VSIIHCYINNKSIDSLYNPIEIREKA 562
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ D +AQYELG DY + ++EK+ D + AL+LL +Y GD VK+D
Sbjct: 563 SQSDDNAQYELGKYHYTCQDY----DRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKED 618
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL- 236
+A++ G + A + G L L G V + L + + AA++ + NL
Sbjct: 619 QTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLG 678
Query: 237 ---------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIE 266
++KAK F VAA++G L+++E
Sbjct: 679 WIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLE 717
>gi|432471064|ref|ZP_19713111.1| hypothetical protein A15M_01945 [Escherichia coli KTE206]
gi|430998282|gb|ELD14523.1| hypothetical protein A15M_01945 [Escherichia coli KTE206]
Length = 702
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 438 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 497
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D ++ + ++++ ++ A G + +G ++P+ +T
Sbjct: 498 GRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMT 542
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY L + ++ V D QQ Y++ + DQ + A LG +Y G +
Sbjct: 479 SAEQGYAEAQYHLAT-MYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEI 537
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D+ A+ A++ G AA+ G L + G
Sbjct: 538 PQDMTMAINLLKSAADHGDIDAALVLGQLYVHG 570
>gi|407776666|ref|ZP_11123938.1| hypothetical protein NA2_01819 [Nitratireductor pacificus pht-3B]
gi|407301362|gb|EKF20482.1| hypothetical protein NA2_01819 [Nitratireductor pacificus pht-3B]
Length = 600
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A L++ A G+ DAQ+ L L VQ +A + KA +Q H A Y +G +Y
Sbjct: 424 ATWLLEPAMAGNADAQFALASILYSNRAGVQDRAKAVGWFRKAAEQGHAAAQYKIGELYA 483
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
G V KD A +A+E+GH A + G +L G VP
Sbjct: 484 YGRAVGKDPERAAEWIRKAAEQGHPAAQVHLGVMLQNGEGVP 525
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + A+Y + +L+ G A + AA G P AQ LG L+ +
Sbjct: 467 AEQGHAAAQYKIGELYAYGRAVGKDPERAAEWIRKAAEQGHPAAQVHLGVMLQNGEGVPK 526
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
++ AF + KA Q + LG +Y G V+ D A +A GH A
Sbjct: 527 DEKLAFEWQSKAAAQDDRQGAFNLGILYANGIGVELDFGKAEEWLRKAQALGHTSA 582
>gi|298372182|ref|ZP_06982172.1| TPR repeat protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275086|gb|EFI16637.1| TPR repeat protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 372
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQ LG QS +A Y+ +KA +Q H A + LG Y G V+
Sbjct: 212 AAEQGNSDAQCNLGFYYSQGQGVEQSYSKAIYWYKKAAEQGHSKAQFNLGVCYDEGKGVE 271
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ + A++ + +A+E+GH+ A G G V + +K AA++ + + N
Sbjct: 272 QSYSKAIYWYKKAAEQGHSKAQYNIGVCYYNGNGVEQSYSKAAYWYKKAAEQGHSVAQFN 331
Query: 236 L------MNPVEKAK 244
L N VEK+K
Sbjct: 332 LGTCYYNGNGVEKSK 346
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A L AA GD DAQ ++G QS +A Y+ +KA +Q + A +G Y
Sbjct: 62 AYWLERAAEQGDSDAQCKIGFCYNEGKGVEQSYSKAIYWYKKAAEQGNSVAQCNIGFCYN 121
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
G+ V++ + A + + +A+E+G++ A G G V + +K AA++
Sbjct: 122 EGEGVEQSYSKAAYWWEKAAEQGNSVAQCNIGVCYSEGEGVEQSYSKAAYWYERAAEQGH 181
Query: 230 ANLESNLMNPVEKAK--EQ--------FEVAAQAG-----CNLGLRWLQ 263
+N + N+ ++ K EQ ++ AA+ G CNLG + Q
Sbjct: 182 SNAQYNIGVCYDEGKGVEQSYSKAIYWYKKAAEQGNSDAQCNLGFYYSQ 230
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY +G QS +A Y+ +KA +Q + A LG Y G V+
Sbjct: 176 AAEQGHSNAQYNIGVCYDEGKGVEQSYSKAIYWYKKAAEQGNSDAQCNLGFYYSQGQGVE 235
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ + A++ + +A+E+GH+ A G G V + +K AA++ + + N
Sbjct: 236 QSYSKAIYWYKKAAEQGHSKAQFNLGVCYDEGKGVEQSYSKAIYWYKKAAEQGHSKAQYN 295
Query: 236 L 236
+
Sbjct: 296 I 296
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+++ A G+ +AQ LG + ++ V QS +A Y++E+A +Q A +G Y G
Sbjct: 28 IIEKAKTGNANAQKTLGSYYYLGSNGVEQSYSKAAYWLERAAEQGDSDAQCKIGFCYNEG 87
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
V++ + A++ + +A+E+G++ A G G V + +K
Sbjct: 88 KGVEQSYSKAIYWYKKAAEQGNSVAQCNIGFCYNEGEGVEQSYSK 132
>gi|110641883|ref|YP_669613.1| hypothetical protein ECP_1709 [Escherichia coli 536]
gi|191171699|ref|ZP_03033246.1| putative TPR repeat protein [Escherichia coli F11]
gi|422377177|ref|ZP_16457420.1| DnaJ domain protein [Escherichia coli MS 60-1]
gi|433077845|ref|ZP_20264396.1| hypothetical protein WIU_01716 [Escherichia coli KTE131]
gi|110343475|gb|ABG69712.1| putative TPR repeat protein [Escherichia coli 536]
gi|190908029|gb|EDV67621.1| putative TPR repeat protein [Escherichia coli F11]
gi|324011514|gb|EGB80733.1| DnaJ domain protein [Escherichia coli MS 60-1]
gi|431597516|gb|ELI67422.1| hypothetical protein WIU_01716 [Escherichia coli KTE131]
Length = 649
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 385 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 444
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D ++ + ++++ ++ A G + +G ++P+ +T
Sbjct: 445 GRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMT 489
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY L + ++ V D QQ Y++ + DQ + A LG +Y G +
Sbjct: 426 SAEQGYAEAQYHLAT-MYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEI 484
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D+ A+ A++ G AA+ G L + G
Sbjct: 485 PQDMTMAINLLKSAADHGDIDAALVLGQLYVHG 517
>gi|54297129|ref|YP_123498.1| hypothetical protein lpp1174 [Legionella pneumophila str. Paris]
gi|53750914|emb|CAH12325.1| hypothetical protein lpp1174 [Legionella pneumophila str. Paris]
Length = 490
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
D A GD AQ+ELG + + D V D ++A Y+ +KA DQ A LG +YL G+
Sbjct: 38 DKAEQGDAQAQFELGLKYE-KGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEG 96
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
V ++ A++ F +ASE+G A G L G+ V + L + AA+ ++ +
Sbjct: 97 VPQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQ 156
Query: 234 SNL 236
NL
Sbjct: 157 YNL 159
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 65 IPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLV--DAANMGD 121
+ +++++ F +A+ + A++ +L LKY G K + A+ AA+ G
Sbjct: 24 VDTYRSSQKQFNTEDKAEQGDAQAQF---ELGLKYEKGDGVNKDLKKAIYWYQKAADQGQ 80
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQ LG Q+ QQA Y+ +KA +Q +G +Y G VKKD+ A
Sbjct: 81 AEAQNNLGVLYLKGEGVPQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQA 140
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVE 241
+ +A+E G++ + + G +P+ + K + AA++ + ++NL E
Sbjct: 141 FIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYE 200
Query: 242 KAKE 245
+ +E
Sbjct: 201 RGEE 204
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QAF + +KA + + Y L +Y+ G+ + KDI A+ + +A+E+G A G L
Sbjct: 139 QAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVL 198
Query: 204 LLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
RG +VP L + AA + ++NL
Sbjct: 199 YERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 231
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQ LG + +Q ++A Y+ EKA Q A LG +Y G +
Sbjct: 219 AANEGSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTE 278
Query: 176 KDIASALWCFHRASEKG 192
KD+ A++ + +A+E G
Sbjct: 279 KDMKKAIYWYEKAAENG 295
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 103 GACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
G K +G A + AA G+ D QY L N + ++A ++ KA +Q A
Sbjct: 132 GVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDA 191
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG +Y G+ V +D+ +A+ + RA+ +G A G L + G
Sbjct: 192 QNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTG 238
>gi|431793355|ref|YP_007220260.1| hypothetical protein Desdi_1355 [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783581|gb|AGA68864.1| TPR repeat-containing protein [Desulfitobacterium dichloroeliminans
LMG P-21439]
Length = 968
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-Q 143
N HA+Y LSK++L L AA G+ AQY LG +L + +V+ D +
Sbjct: 675 NVHAQYMLSKIYLDVDSGHENAERAVQWLTKAAENGNSLAQYALG-KLYRDGSHVEQDME 733
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+A ++ DQ + A Y LG +YL G+ + KD A+A+ ++E G+ A L
Sbjct: 734 KAITLFIQSADQENQYAAYALGKLYLNGENIPKDAATAVKWLSVSTELGNQYAQYTLAKL 793
Query: 204 LLRGVQVPECLTK 216
G P+ + +
Sbjct: 794 YFTGEDAPQDIPR 806
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 58/131 (44%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N +A Y L KL+L A L + +G+ AQY L D Q
Sbjct: 743 ADQENQYAAYALGKLYLNGENIPKDAATAVKWLSVSTELGNQYAQYTLAKLYFTGEDAPQ 802
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+A K+ Q + A Y LG +YL G+ V K+ SA+ ++E+G+ A A
Sbjct: 803 DIPRAVELFTKSALQNNSFAQYQLGKLYLLGEHVTKNAESAVKWLILSAEQGNQYAQYAL 862
Query: 201 GSLLLRGVQVP 211
G L L G VP
Sbjct: 863 GKLYLIGRDVP 873
>gi|432583904|ref|ZP_19820304.1| hypothetical protein A1SM_03125, partial [Escherichia coli KTE57]
gi|431116554|gb|ELE19997.1| hypothetical protein A1SM_03125, partial [Escherichia coli KTE57]
Length = 514
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 250 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 309
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D ++ + ++++ ++ A G + +G ++P+ +T
Sbjct: 310 GRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMT 354
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY L + ++ V D QQ Y++ + DQ + A LG +Y G +
Sbjct: 291 SAEQGYAEAQYHLAT-MYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEI 349
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D+ A+ A++ G AA+ G L + G
Sbjct: 350 PQDMTMAINLLKSAADHGDIDAALVLGQLYVHG 382
>gi|397663642|ref|YP_006505180.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|397666839|ref|YP_006508376.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395127053|emb|CCD05238.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395130250|emb|CCD08488.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 489
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
D A GD AQ+ELG + + D V D ++A Y+ +KA DQ A LG +YL G+
Sbjct: 37 DKAEQGDAQAQFELGLKYE-KGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEG 95
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
V ++ A++ F +ASE+G A G L G+ V + L + AA+ ++ +
Sbjct: 96 VPQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQ 155
Query: 234 SNL 236
NL
Sbjct: 156 YNL 158
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 65 IPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLV--DAANMGD 121
+ +++++ F +A+ + A++ +L LKY G K + A+ AA+ G
Sbjct: 23 VDTYRSSQKQFNTEDKAEQGDAQAQF---ELGLKYEKGDGVNKDLKKAIYWYQKAADQGQ 79
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQ LG Q+ QQA Y+ +KA +Q +G +Y G VKKD+ A
Sbjct: 80 AEAQNNLGVLYLKGEGVPQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQA 139
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVE 241
+ +A+E G++ + + G +P+ + K + AA++ + ++NL E
Sbjct: 140 FIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYE 199
Query: 242 KAKE 245
+ +E
Sbjct: 200 RGEE 203
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QAF + +KA + + Y L +Y+ G+ + KDI A+ + +A+E+G A G L
Sbjct: 138 QAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVL 197
Query: 204 LLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
RG +VP L + AA + ++NL
Sbjct: 198 YERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 230
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQ LG + +Q ++A Y+ EKA Q A LG +Y G +
Sbjct: 218 AANEGSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTE 277
Query: 176 KDIASALWCFHRASEKG 192
KD+ A++ + +A+E G
Sbjct: 278 KDMKKAIYWYEKAAENG 294
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 103 GACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
G K +G A + AA G+ D QY L N + ++A ++ KA +Q A
Sbjct: 131 GVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDA 190
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG +Y G+ V +D+ +A+ + RA+ +G A G L + G
Sbjct: 191 QNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTG 237
>gi|257063145|ref|YP_003142817.1| hypothetical protein Shel_04070 [Slackia heliotrinireducens DSM
20476]
gi|256790798|gb|ACV21468.1| TPR repeat-containing protein [Slackia heliotrinireducens DSM
20476]
Length = 1032
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
DAAN+G+P+A Y L RL ++ +QA + KA D H A+ LG +Y G+ V
Sbjct: 725 DAANLGNPNAMYNLAVRLANGGGVKKNAKQAANWYRKAADAGHAPAMNSLGLMYEQGEGV 784
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK-------- 226
K+ A A+ F +A++ G+ A G +L G + + L + AA+
Sbjct: 785 AKNHAEAMRWFRKAADAGNVMAMCNMGRMLSTGKEASKNLMEAAQWYRKAAEFGETESMY 844
Query: 227 ---KARANLESNLMNPVEKAKEQFEVAAQAGCNLGL 259
+ AN + NP+E A + F AA+ G L +
Sbjct: 845 NLGRMLANGQGTGKNPLE-AAQWFRRAAEDGHELAM 879
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DA YELG N ++ ++A + KA D + A++ L ++ L G+ K
Sbjct: 335 AAEAGRMDAMYELGLLYERGNGVTENRREAVSWYRKAADAGNADAMFRLASIRLHGNGAK 394
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
KD+A A F RA+E GH A G + G V + T+
Sbjct: 395 KDLAEAFDLFKRAAEAGHPQAMFNTGVMYAHGDGVKKDATE 435
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ G+ DA + L +R+ + + D +AF ++A + HP A++ G +Y GD V
Sbjct: 371 AADAGNADAMFRL-ASIRLHGNGAKKDLAEAFDLFKRAAEAGHPQAMFNTGVMYAHGDGV 429
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KKD A + +A++ G GA G + RG V
Sbjct: 430 KKDATEAASWYRKAADAGVTGAMCNLGIMHERGDGV 465
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDAANMGDPDAQYELGCRLRVENDY 138
AD N A + L+ + L H GA K + A L AA G P A + G + D
Sbjct: 372 ADAGNADAMFRLASIRL--HGNGAKKDLAEAFDLFKRAAEAGHPQAMFNTGV-MYAHGDG 428
Query: 139 VQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
V+ D +A + KA D GA+ LG ++ GD V KD A + +AS+ +A A
Sbjct: 429 VKKDATEAASWYRKAADAGVTGAMCNLGIMHERGDGVAKDPQEAASLYRKASDLDNALGA 488
Query: 198 IAYGSLLLRGVQV 210
G +LL G V
Sbjct: 489 YNLGIMLLNGSGV 501
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ ++ Y LG L ++ +A + +A + H A+Y LG +Y G+ V
Sbjct: 834 AAEFGETESMYNLGRMLANGQGTGKNPLEAAQWFRRAAEDGHELAMYHLGVMYANGEGVA 893
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++ AL + +A++ G+A A G +L G+ V
Sbjct: 894 RNPHEALTWYRKAADLGNANAMYNLGVMLAGGIGV 928
>gi|419913974|ref|ZP_14432382.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
gi|388387826|gb|EIL49431.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
Length = 585
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 321 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 380
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D ++ + ++++ ++ A G + +G ++P+ +T
Sbjct: 381 GRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMT 425
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY L + ++ V D QQ Y++ + DQ + A LG +Y G +
Sbjct: 362 SAEQGYAEAQYHLAT-MYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEI 420
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D+ A+ A++ G AA+ G L + G
Sbjct: 421 PQDMTMAINLLKSAADHGDIDAALVLGQLYVHG 453
>gi|421695865|ref|ZP_16135462.1| Sel1 repeat protein [Acinetobacter baumannii WC-692]
gi|404564101|gb|EKA69292.1| Sel1 repeat protein [Acinetobacter baumannii WC-692]
Length = 285
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 88 ARYWLSKLHLKYHVP-----GACKAMGAAL----------LVDAANMGDPDAQYELGCRL 132
A+YW K L+ +P G + G + +DAAN GD DAQ LG
Sbjct: 118 AKYWYEKAALQGDIPSLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMF 177
Query: 133 RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
Q+ ++A + KA Q A Y LG +YL GD +K+D + A F A+ +G
Sbjct: 178 LHGRGVTQNKEEASQWYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYSQAQKWFLAAANQG 237
Query: 193 HAGAAIAYGSLLLRGVQVPECLT 215
+ A G + G+ V + L+
Sbjct: 238 ESNAQFHLGKIYKDGLGVDKNLS 260
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AN G +AQY LG L + N++++ D +A Y+ EKA Q +L LG Y G +
Sbjct: 89 SANQGYVNAQYNLGL-LYMGNEHIKPDYAKAKYWYEKAALQGDIPSLNELGNFYSKGLGI 147
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
K+D A+ + A+ G + A G++ L G V + + + + AA + + +
Sbjct: 148 KQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQWYLKAAIQGDIDAQY 207
Query: 235 NL 236
NL
Sbjct: 208 NL 209
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQY LG + + Q QA + A +Q A + LG +Y G V
Sbjct: 197 AAIQGDIDAQYNLGLMYLLGDGIKQDYSQAQKWFLAAANQGESNAQFHLGKIYKDGLGVD 256
Query: 176 KDIASALWCFHRASEKGHAGAA 197
K+++ A F +++E G++ AA
Sbjct: 257 KNLSLARTWFEKSAEAGNSYAA 278
>gi|345020394|ref|ZP_08784007.1| hypothetical protein OTW25_03551 [Ornithinibacillus scapharcae
TW25]
Length = 333
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A G+ +AQ EL + ++ D AF + A + ALY LG Y G
Sbjct: 107 LYTEAVTGNLEAQIELAHFYKT----IEHDDWAFEWFLVAAQAGNSDALYWLGNYYFVGT 162
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
V +D+ C+ +A+EKGHA A Y + LRG VP
Sbjct: 163 VVDQDLEKTYNCYKQAAEKGHADAMNNYADMYLRGEYVP 201
>gi|158522728|ref|YP_001530598.1| Sel1 domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511554|gb|ABW68521.1| Sel1 domain protein repeat-containing protein [Desulfococcus
oleovorans Hxd3]
Length = 254
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ +LG + + Q+ Q+AF + KA +Q A YLLG +Y G V
Sbjct: 106 AAEQGHSGAQLDLGRMYYLGHGVPQNYQKAFEWFTKAAEQGESDAEYLLGGMYFYGTGVP 165
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A + +A+E+G A + G++ G+ VP+
Sbjct: 166 QDYKKAFEWYSKAAEQGQPEAQASLGAMYFLGLGVPQ 202
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 116 AANMGDPDAQYELGCRLRVEN--DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA G DAQ LG VE + +++ + EKA +Q H GA LG +Y G
Sbjct: 68 AAEQGGKDAQENLGLFYYVEGLKGMEVNKEESLQWFEKAAEQGHSGAQLDLGRMYYLGHG 127
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
V ++ A F +A+E+G + A G + G VP+ K AA++ + +
Sbjct: 128 VPQNYQKAFEWFTKAAEQGESDAEYLLGGMYFYGTGVPQDYKKAFEWYSKAAEQGQPEAQ 187
Query: 234 SNL 236
++L
Sbjct: 188 ASL 190
>gi|300995889|ref|ZP_07181299.1| Sel1 repeat protein, partial [Escherichia coli MS 200-1]
gi|300304677|gb|EFJ59197.1| Sel1 repeat protein [Escherichia coli MS 200-1]
Length = 475
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 211 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 270
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D ++ + ++++ ++ A G + +G ++P+ +T
Sbjct: 271 GRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMT 315
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY L + ++ V D QQ Y++ + DQ + A LG +Y G +
Sbjct: 252 SAEQGYAEAQYHLAT-MYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEI 310
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D+ A+ A++ G AA+ G L + G
Sbjct: 311 PQDMTMAINLLKSAADHGDIDAALVLGQLYVHG 343
>gi|445499600|ref|ZP_21466455.1| Sel-1-like protein [Janthinobacterium sp. HH01]
gi|444789595|gb|ELX11143.1| Sel-1-like protein [Janthinobacterium sp. HH01]
Length = 531
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQY LG + VQ Q+A ++ KA DQ H A + LG Y TG V
Sbjct: 315 AAEQGFPGAQYHLGMLYDAGHGVVQDHQEAIFWYRKAADQGHLRAQFDLGLRYETGRGVP 374
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLR--GVQVPECLTKLNAKRVSAAKKARA 230
+D A+ + RA+E+ +A A G L + G Q P+C + N AA++ A
Sbjct: 375 RDDRKAMAWYRRAAEQDYAAAQYNLGLLFDKDDGPQ-PDC-AQANGWYAKAAEQGHA 429
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG R Q +QA ++ KA +Q PGA Y LG +Y G V
Sbjct: 279 AAEQGHAAAQNNLGLRYDHGQGVAQDYEQAQFWYRKAAEQGFPGAQYHLGMLYDAGHGVV 338
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ + +A+++GH A G G VP K A AA++ A + N
Sbjct: 339 QDHQEAIFWYRKAADQGHLRAQFDLGLRYETGRGVPRDDRKAMAWYRRAAEQDYAAAQYN 398
Query: 236 L 236
L
Sbjct: 399 L 399
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 73 ENFELAL-----EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
+++ELA+ A + HA+Y L ++ K AA AA G AQY
Sbjct: 51 QSYELAVVWYRQAAQSGLEHAQYNLGVMYQKGQGVEQNYQEAAAWYQLAAEQGYAAAQYN 110
Query: 128 LGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
LG L + + +D Q+A Y+ KA DQ GA LG +Y TG V +D A+ +
Sbjct: 111 LGW-LYAKGQGLDADTQKAMYWFSKAADQGDAGAQNNLGMMYDTGKGVPQDFKQAIAWYR 169
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A+E+G+ A G G VP+ + + + AA + A + NL
Sbjct: 170 KAAEQGYPRAQFNLGLRYDNGQGVPQDVGQAMSWYRKAADQGYAPAQFNL 219
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 21/146 (14%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ+ LG R Q QA + KA DQ + A + L + GD +
Sbjct: 171 AAEQGYPRAQFNLGLRYDNGQGVPQDVGQAMSWYRKAADQGYAPAQFNLALRFDKGDGIA 230
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + RA+E+ HA + G + G VP E
Sbjct: 231 QDSQKAILWYRRAAEQDHASSQFNLGLIYDNGQGVPRD-------------------EQK 271
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRW 261
++ KA EQ AAQ NLGLR+
Sbjct: 272 ALDWYRKAAEQGHAAAQ--NNLGLRY 295
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQ++LG R + D++A + +A +Q + A Y LG ++ D +
Sbjct: 351 AADQGHLRAQFDLGLRYETGRGVPRDDRKAMAWYRRAAEQDYAAAQYNLGLLFDKDDGPQ 410
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
D A A + +A+E+GHA A G G + + + + + AA + A + N
Sbjct: 411 PDCAQANGWYAKAAEQGHALAQFTLGLRYDNGQGLAQDYAQAHHWYLKAAGQGHARAQFN 470
Query: 236 L 236
L
Sbjct: 471 L 471
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG R Q QA ++ KA Q H A + LG +++ G V+
Sbjct: 423 AAEQGHALAQFTLGLRYDNGQGLAQDYAQAHHWYLKAAGQGHARAQFNLGLMFMVGQGVR 482
Query: 176 KDIASALWCFHRASEKGHAGAA 197
DIA A A G+A A
Sbjct: 483 ADIAQAWMWLAMAERSGYAAAG 504
>gi|51596307|ref|YP_070498.1| hypothetical protein YPTB1981 [Yersinia pseudotuberculosis IP
32953]
gi|186895347|ref|YP_001872459.1| Sel1 domain-containing protein [Yersinia pseudotuberculosis PB1/+]
gi|51589589|emb|CAH21219.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|186698373|gb|ACC89002.1| Sel1 domain protein repeat-containing protein [Yersinia
pseudotuberculosis PB1/+]
Length = 720
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 17/219 (7%)
Query: 58 ELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
E NDR L T N E+ + N +S +H + + A
Sbjct: 506 EFNDRTGRLLTTTPYVNNEIQGTGETYNADG---VSIIHCYINNKSIDSLYNPIEIRKKA 562
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ D +AQYELG DY + ++EK+ D + AL+LL +Y GD VK+D
Sbjct: 563 SQSDDNAQYELGKYHYTCQDY----DRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKED 618
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL- 236
+A++ G + A + G L L G V + L + + AA++ + NL
Sbjct: 619 QTQYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLG 678
Query: 237 ---------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIE 266
++KAK F VAA++G L+++E
Sbjct: 679 WIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLE 717
>gi|427400391|ref|ZP_18891629.1| hypothetical protein HMPREF9710_01225 [Massilia timonae CCUG 45783]
gi|425720665|gb|EKU83584.1| hypothetical protein HMPREF9710_01225 [Massilia timonae CCUG 45783]
Length = 527
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A + AA G AQ+ LG R D Q +QA + +A +Q H + + L +Y T
Sbjct: 203 AWMRKAAEQGHAPAQFNLGLRYDKGQDVEQDSRQAILWYGRAGEQGHASSQFNLALIYDT 262
Query: 171 GDCVKKDIASALWCFHRASEKGHAGA 196
G V +D A AL + RA+E+GHAGA
Sbjct: 263 GHGVPRDEALALTWYRRAAEQGHAGA 288
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
AD A+Y L L+ K H G +G AL AA+ G+P AQ+ LG
Sbjct: 101 ADQGYAPAQYNLGWLYAKGH--GVASDVGRALHWFSQAADQGEPGAQHNLGMMFETGKGV 158
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
Q + A + +A +Q + + Y LG Y G V +D+ AL +A+E+GHA A
Sbjct: 159 AQDQEAALRWYRRAAEQGYVRSQYNLGLRYEAGQGVARDVREALAWMRKAAEQGHAPAQF 218
Query: 199 AYGSLLLRGVQVPE 212
G +G V +
Sbjct: 219 NLGLRYDKGQDVEQ 232
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +QY LG R + ++A ++ KA +Q H A + LG Y G V+
Sbjct: 172 AAEQGYVRSQYNLGLRYEAGQGVARDVREALAWMRKAAEQGHAPAQFNLGLRYDKGQDVE 231
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP--ECLTKLNAKRVSAAKKARANLE 233
+D A+ + RA E+GHA + + G VP E L +R AA++ A +
Sbjct: 232 QDSRQAILWYGRAGEQGHASSQFNLALIYDTGHGVPRDEALALTWYRR--AAEQGHAGAQ 289
Query: 234 SNL 236
++L
Sbjct: 290 NSL 292
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
QY LG + Q QA ++ +A DQ + A Y LG +Y G V D+ AL
Sbjct: 73 QYNLGVMFQKGQGVEQDFGQAAHWYGRAADQGYAPAQYNLGWLYAKGHGVASDVGRALHW 132
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL-------- 236
F +A+++G GA G + G V + AA++ + NL
Sbjct: 133 FSQAADQGEPGAQHNLGMMFETGKGVAQDQEAALRWYRRAAEQGYVRSQYNLGLRYEAGQ 192
Query: 237 ---------MNPVEKAKEQFEVAAQAGCNLGLRW--LQRIEEEEKRLLTESSR 278
+ + KA EQ AQ NLGLR+ Q +E++ ++ + R
Sbjct: 193 GVARDVREALAWMRKAAEQGHAPAQ--FNLGLRYDKGQDVEQDSRQAILWYGR 243
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG R QA + +A +Q P A Y LG + G+ V+
Sbjct: 280 AAEQGHAGAQNSLGMRHEHGQGVAVDAAQAAAWYRRAAEQGLPAAQYHLGQLLDAGNGVE 339
Query: 176 KDIASALWCFHRASEKGH 193
+D A A + RA+E+GH
Sbjct: 340 QDPAQATDWYRRAAEQGH 357
>gi|354594378|ref|ZP_09012417.1| hypothetical protein CIN_11130 [Commensalibacter intestini A911]
gi|353672054|gb|EHD13754.1| hypothetical protein CIN_11130 [Commensalibacter intestini A911]
Length = 213
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N +A+ L ++ A A AAN G+ AQY LG Q
Sbjct: 44 ADQGNVNAQLKLGMTYVLGQGVSADYQKAAEYFNKAANQGNAFAQYNLGSMYYYGKGVPQ 103
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
DQ+A Y KA DQ + AL LG +Y G V +D A + +A+ +G+ A
Sbjct: 104 DDQKAIEYFNKAADQGNVSALTQLGVIYAEGQGVSQDYQKAAEYWDKAANQGYEAAQYNL 163
Query: 201 GSLLLRGVQVPE 212
G + G P+
Sbjct: 164 GRMYYYGRGFPQ 175
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ + A+ G+ +AQ +LG + Q+A Y KA +Q + A Y LG++Y G
Sbjct: 39 LVKERADQGNVNAQLKLGMTYVLGQGVSADYQKAAEYFNKAANQGNAFAQYNLGSMYYYG 98
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V +D A+ F++A+++G+ A G + G V + K AA +
Sbjct: 99 KGVPQDDQKAIEYFNKAADQGNVSALTQLGVIYAEGQGVSQDYQKAAEYWDKAANQGYEA 158
Query: 232 LESNLM----------NPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRL 272
+ NL +K E F AA G + + L++I ++++ L
Sbjct: 159 AQYNLGRMYYYGRGFPQDSQKTIEYFNKAADQGDVIAQQNLKKIYDQDRDL 209
>gi|254473362|ref|ZP_05086759.1| TPR repeat protein [Pseudovibrio sp. JE062]
gi|211957478|gb|EEA92681.1| TPR repeat protein [Pseudovibrio sp. JE062]
Length = 288
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L + A+ GD DAQ+ L + Q D+ AF + KA Q H GA LLG Y+ G
Sbjct: 44 LQNKAHAGDADAQFSLAVLRHKGTIFKQDDEIAFEWASKAAVQSHAGAQNLLGFFYMNGR 103
Query: 173 CVKKDIASALWCFHRASEKGHAGAAI 198
VK+D A F +S+ G+A A +
Sbjct: 104 GVKQDFEQAANLFEESSQGGNADAKL 129
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K+ ALL +A +G DA ++L Q+ +A Y+++A D + +L +LG
Sbjct: 145 KSKALALLEEARQLGQSDATHKLAMTYFNGEFVKQNKPKALQYLKQAADLGNDKSLLMLG 204
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+YL G+ V+KD + F + ++K ++ RG +P+
Sbjct: 205 ELYLKGELVEKDEEHSAKLFLQCAKKQNSACQFMTALNYHRGRGLPQ 251
>gi|422341261|ref|ZP_16422202.1| hypothetical protein HMPREF9353_00865 [Treponema denticola F0402]
gi|325474832|gb|EGC78018.1| hypothetical protein HMPREF9353_00865 [Treponema denticola F0402]
Length = 784
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQY LG + +++A + KA +Q H A Y LG +Y G K
Sbjct: 320 AAEQGNVYAQYSLGFMYNNGQGTKKDEKKAVEWYTKAAEQGHSSAQYFLGFMYDNGQGTK 379
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+E+GH+ A G++ G V K AA++ A ++N
Sbjct: 380 KDEKKAVEWYTKAAEQGHSSAQNNLGTIYANGTGVEINYKKAFELYTRAAEQGNAYAQNN 439
Query: 236 LMNPVEKAK 244
L E K
Sbjct: 440 LGYMYENGK 448
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G+ +AQY LG R + D V+ D ++AF + +K DQ + A LG Y G V+
Sbjct: 73 AESGNSEAQYLLGKRYS-DGDGVEKDYKKAFEWFKKGADQGNANAQNALGVCYANGQGVE 131
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
K+ A+ + +A E+G+A A G++ G V + K AA++ A + N
Sbjct: 132 KNYTIAIDLYKKAIEQGNAKAQNNLGNMYYDGNGVDKNYEKAFELYKKAAEQGNAYAQDN 191
Query: 236 L 236
L
Sbjct: 192 L 192
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQY 126
+T E +L L+A++ N+ A+Y L K + G K A A+ G+ +AQ
Sbjct: 61 ETISEFDKLKLDAESGNSEAQYLLGKRYS--DGDGVEKDYKKAFEWFKKGADQGNANAQN 118
Query: 127 ELG-CRLR---VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
LG C VE +Y A +KA++Q + A LG +Y G+ V K+ A
Sbjct: 119 ALGVCYANGQGVEKNYTI----AIDLYKKAIEQGNAKAQNNLGNMYYDGNGVDKNYEKAF 174
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL------ 236
+ +A+E+G+A A G + G V + ++ AA + AN ++NL
Sbjct: 175 ELYKKAAEQGNAYAQDNLGYMYENGEGVEKNTSEAIKWYTKAADQGVANAQNNLGWIYED 234
Query: 237 MNPVEKAKEQFEVAAQAGCNLGLRWLQRI 265
+A + +AAQ G G L R+
Sbjct: 235 REEYNRAAAMYLMAAQQGHASGQNNLGRM 263
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ LG ++ ++AF + KA +Q + A Y LG +Y G K
Sbjct: 284 AAEQGNVYAQSNLGGMYYDGYGVDKNYEKAFEWYTKAAEQGNVYAQYSLGFMYNNGQGTK 343
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+E+GH+ A G + G + K AA++ ++ ++N
Sbjct: 344 KDEKKAVEWYTKAAEQGHSSAQYFLGFMYDNGQGTKKDEKKAVEWYTKAAEQGHSSAQNN 403
Query: 236 L 236
L
Sbjct: 404 L 404
>gi|170024436|ref|YP_001720941.1| Sel1 domain-containing protein [Yersinia pseudotuberculosis YPIII]
gi|169750970|gb|ACA68488.1| Sel1 domain protein repeat-containing protein [Yersinia
pseudotuberculosis YPIII]
Length = 720
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 17/219 (7%)
Query: 58 ELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
E NDR L T N E+ + N +S +H + + A
Sbjct: 506 EFNDRTGRLLTTTPYVNNEIQGTGETYNADG---VSIIHCYINNKSIDSLYNPIEIRKKA 562
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ D +AQYELG DY + ++EK+ D + AL+LL +Y GD VK+D
Sbjct: 563 SQSDDNAQYELGKYHYTCQDY----DRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKED 618
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL- 236
+A++ G + A + G L L G V + L + + AA++ + NL
Sbjct: 619 QTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLG 678
Query: 237 ---------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIE 266
++KAK F VAA++G L+++E
Sbjct: 679 WIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLE 717
>gi|397676944|ref|YP_006518482.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397633|gb|AFN56960.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 138
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA GD AQY LG D +SD+QA + ++A Q + A + LG Y G+
Sbjct: 10 LQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQRAAHQGYAPAEFNLGAAYYHGE 69
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
V +D A++ + +A+E+G A A A G + G V +
Sbjct: 70 GVVQDYGQAVFWYQKAAEQGDAKAQTALGVAYITGRGVTKS 110
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G A++ LG VQ QA ++ +KA +Q A LG Y+TG V
Sbjct: 49 AAHQGYAPAEFNLGAAYYHGEGVVQDYGQAVFWYQKAAEQGDAKAQTALGVAYITGRGVT 108
Query: 176 KDIASALWCFHRASEKG 192
K +AL +A+++G
Sbjct: 109 KSRDNALIWIQKAADQG 125
>gi|148358759|ref|YP_001249966.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296106804|ref|YP_003618504.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
gi|148280532|gb|ABQ54620.1| TPR repeat protein [Legionella pneumophila str. Corby]
gi|295648705|gb|ADG24552.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 489
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
D A GD AQ+ELG + + D V D ++A Y+ +KA DQ A LG +YL G+
Sbjct: 37 DKAEQGDAQAQFELGLQYE-KGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEG 95
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
V ++ A++ F +ASE+G A G L G+ V + L + AA+ ++ +
Sbjct: 96 VPQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQ 155
Query: 234 SNL 236
NL
Sbjct: 156 YNL 158
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 65 IPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLV--DAANMGD 121
+ +++++ F +A+ + A++ +L L+Y G K + A+ AA+ G
Sbjct: 23 VDTYRSSQKQFNTEDKAEQGDAQAQF---ELGLQYEKGDGVNKDLKKAIYWYQKAADQGQ 79
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQ LG Q+ QQA Y+ +KA +Q +G +Y G VKKD+ A
Sbjct: 80 AEAQNNLGVLYLKGEGVPQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQA 139
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVE 241
+ +A+E G++ + + G +P+ + K + AA++ + ++NL E
Sbjct: 140 FIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYE 199
Query: 242 KAKE 245
+ +E
Sbjct: 200 RGEE 203
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QAF + +KA + + Y L +Y+ G+ + KDI A+ + +A+E+G A G L
Sbjct: 138 QAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVL 197
Query: 204 LLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
RG +VP L + AA + ++NL
Sbjct: 198 YERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 230
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQ LG + +Q ++A Y+ EKA Q A LG +Y G +
Sbjct: 218 AANEGSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTE 277
Query: 176 KDIASALWCFHRASEKG 192
KD+ A++ + +A+E G
Sbjct: 278 KDMKKAIYWYEKAAENG 294
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 103 GACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
G K +G A + AA G+ D QY L N + ++A ++ KA +Q A
Sbjct: 131 GVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDA 190
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG +Y G+ V +D+ +A+ + RA+ +G A G L + G
Sbjct: 191 QNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTG 237
>gi|374330895|ref|YP_005081079.1| Sel1 domain-containing protein repeat-containing protein
[Pseudovibrio sp. FO-BEG1]
gi|359343683|gb|AEV37057.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
FO-BEG1]
Length = 279
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L + A+ GD DAQ+ L + Q D+ AF + KA Q H GA LLG Y+ G
Sbjct: 35 LQNKAHAGDADAQFSLAVLRHKGTIFKQDDEIAFEWASKAAVQSHAGAQNLLGFFYMNGR 94
Query: 173 CVKKDIASALWCFHRASEKGHAGAAI 198
VK+D A F +S+ G+A A +
Sbjct: 95 GVKQDFEQAANLFEESSQGGNADAKL 120
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K+ ALL +A +G DA ++L Q+ +A Y+++A D + +L +LG
Sbjct: 136 KSKALALLEEARQLGQSDATHKLAMTYFNGEFVKQNKPKALQYLKQAADLGNDKSLLMLG 195
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+YL G+ V+KD + F + ++K ++ RG +P+
Sbjct: 196 ELYLKGELVEKDEEHSAKLFLQCAKKQNSACQFMTALNYHRGRGLPQ 242
>gi|334144575|ref|YP_004537731.1| Sel1 domain-containing protein repeat-containing protein
[Thioalkalimicrobium cyclicum ALM1]
gi|333965486|gb|AEG32252.1| Sel1 domain protein repeat-containing protein [Thioalkalimicrobium
cyclicum ALM1]
Length = 364
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQ+ LG R Q +QA Y+ E+A Q A Y LG YL G V
Sbjct: 105 AAEQGDTDAQFHLGVLYRSGLGVAQDYKQAIYWYEQAAKQGDADAQYFLGDSYLYGQGVT 164
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
KD A++ + +A+++G A G + G V + L
Sbjct: 165 KDYNQAVFWYEQAAKQGRIYAQFRLGVMYGNGEGVKQDL 203
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA GD +AQ+ELG + V + Q QA Y+ E+A Q A + L +YL G
Sbjct: 30 LEQAAKQGDAEAQFELGVKYYVGSGVEQDYNQAAYWYEQAAKQGFADAQFSLAVMYLNGL 89
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V++D A + + +A+E+G A G L G+ V + + AAK+ A+
Sbjct: 90 YVEQDYNQAAYWYEQAAEQGDTDAQFHLGVLYRSGLGVAQDYKQAIYWYEQAAKQGDADA 149
Query: 233 ESNLMNP 239
+ L +
Sbjct: 150 QYFLGDS 156
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQY LG + QA ++ E+A Q A + LG +Y G+ VK
Sbjct: 141 AAKQGDADAQYFLGDSYLYGQGVTKDYNQAVFWYEQAAKQGRIYAQFRLGVMYGNGEGVK 200
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D+ +A + + +A+++G+ A G + G+ V E T+
Sbjct: 201 QDLKAAAYWYEQAAKQGYVRAQFILGVMYTDGLGVAEDYTQ 241
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY LG Q +QAFY+ +KA Q + LG +Y G VK
Sbjct: 249 AAKQGLFDAQYGLGVMYINGTGVAQDYKQAFYWFKKAAKQGDAVSQNSLGVMYANGSGVK 308
Query: 176 KDIASALWCFHRASEKGH 193
+D +A F+ +S G+
Sbjct: 309 QDYVAAYKWFNISSANGN 326
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDY 138
A + A+Y+L +L + G K A+ AA G AQ+ LG
Sbjct: 142 AKQGDADAQYFLGDSYL--YGQGVTKDYNQAVFWYEQAAKQGRIYAQFRLGVMYGNGEGV 199
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
Q + A Y+ E+A Q + A ++LG +Y G V +D A++ + +A+++G A
Sbjct: 200 KQDLKAAAYWYEQAAKQGYVRAQFILGVMYTDGLGVAEDYTQAVYWYEQAAKQGLFDAQY 259
Query: 199 AYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G + + G V + + AAK+ A +++L
Sbjct: 260 GLGVMYINGTGVAQDYKQAFYWFKKAAKQGDAVSQNSL 297
>gi|325267697|ref|ZP_08134348.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980821|gb|EGC16482.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 702
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG Q +AF + +A +Q H A + LG +Y GD V+
Sbjct: 359 AAEQGHAAAQFNLGAMYDSGRGVRQDYAEAFRWYRQAAEQGHAEAQFNLGAMYDNGDGVR 418
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A FH+A+E+G+A A G + G V + + AA++ A + N
Sbjct: 419 QDYAEAFRWFHKAAEQGYAEAQNNLGVMYYNGYGVRQDYAESFRWFRKAAEQGVAVAQYN 478
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEE 269
L + + A+A LRW ++ E+E
Sbjct: 479 LGAMYDNGDGVRQDYAEA-----LRWYRQAAEQE 507
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ LG + Q D +A + +A +Q + A LG +Y +GD V+
Sbjct: 287 AAEQGHTEAQNNLGAMYGNGHGVHQDDAEAVKWYRQAAEQGNAEAQNNLGAMYDSGDGVR 346
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A AL + +A+E+GHA A G++ G V + + AA++ A + N
Sbjct: 347 QDYAEALRWYRKAAEQGHAAAQFNLGAMYDSGRGVRQDYAEAFRWYRQAAEQGHAEAQFN 406
Query: 236 L 236
L
Sbjct: 407 L 407
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q +A + +A +Q A LG +Y +G V+
Sbjct: 143 AAEQGFAQAQYNLGVMYETGRGVRQDYAEAVKWYRQAAEQGDAEAQNNLGAMYDSGQGVR 202
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A AL + +A+E+GHA A GS+ G V + + AA + A ++N
Sbjct: 203 QNYAEALRWYRQAAEQGHAEAQFNLGSMYYNGQDVQQDYAEAVKWYRQAADQGNAEAQNN 262
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
L E + + A+A LRW ++ E+
Sbjct: 263 LGLLYENGRGVRQDYAEA-----LRWYRKAAEQ 290
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ+ LG D Q +A + +A DQ + A LG +Y G V+
Sbjct: 215 AAEQGHAEAQFNLGSMYYNGQDVQQDYAEAVKWYRQAADQGNAEAQNNLGLLYENGRGVR 274
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A AL + +A+E+GH A G++ G V + + AA++ A ++N
Sbjct: 275 QDYAEALRWYRKAAEQGHTEAQNNLGAMYGNGHGVHQDDAEAVKWYRQAAEQGNAEAQNN 334
Query: 236 L 236
L
Sbjct: 335 L 335
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG Q D +A + +A ++ P A Y LG +Y G V+
Sbjct: 575 AAEQGYAEAQYNLGAMYAYGRGVRQDDTEAVKWFRQAAEKRFPQAQYNLGVMYAYGRGVR 634
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+D A+ F +A+ +G A G + G V + T
Sbjct: 635 QDDTEAVKWFRQAAAQGLTQAQYNLGIMYYSGRGVRQDRT 674
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD +AQ+ LG Q +A + +A +Q A LG +Y G V++
Sbjct: 36 AEQGDAEAQFNLGLMYYNGQGVRQDYAEAVKWYRQAAEQGDASAQNNLGLMYDNGYGVRQ 95
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A A+ + +A+E+G A A G + +G V + + AA++ A + NL
Sbjct: 96 DYAEAVKWYRQAAEQGDAEAQSNLGVMYDKGYGVRQNYAEAVKWYRQAAEQGFAQAQYNL 155
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQ +LG + Q +A + KA +Q + A LG +Y G V++D A A
Sbjct: 509 AEAQNDLGVMYYNGSGVRQDYAEALRWYRKAAEQGNVEAQNNLGVMYDNGHGVRQDYAEA 568
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
L F +A+E+G+A A G++ G V + T+
Sbjct: 569 LRWFRKAAEQGYAEAQYNLGAMYAYGRGVRQDDTE 603
>gi|432431915|ref|ZP_19674347.1| hypothetical protein A13K_02200 [Escherichia coli KTE187]
gi|432844580|ref|ZP_20077479.1| hypothetical protein A1YS_02219 [Escherichia coli KTE141]
gi|430953464|gb|ELC72362.1| hypothetical protein A13K_02200 [Escherichia coli KTE187]
gi|431394907|gb|ELG78420.1| hypothetical protein A1YS_02219 [Escherichia coli KTE141]
Length = 649
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 385 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 444
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D + + ++E+ ++ A G + +G ++P+ +T
Sbjct: 445 GRGVDVDYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMT 489
>gi|72536288|gb|AAZ73202.1| hypothetical protein [Escherichia coli]
Length = 281
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 17 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 76
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D ++ + ++++ ++ A G + +G ++P+ +T
Sbjct: 77 GRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMT 121
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY L + ++ V D QQ Y++ + DQ + A LG +Y G +
Sbjct: 58 SAEQGYAEAQYHLAT-MYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEI 116
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D+ A+ A++ G AA+ G L + G
Sbjct: 117 PQDMTMAINLLKSAADHGDIDAALVLGQLYVHG 149
>gi|160932473|ref|ZP_02079863.1| hypothetical protein CLOLEP_01311 [Clostridium leptum DSM 753]
gi|156868432|gb|EDO61804.1| Sel1 repeat protein [Clostridium leptum DSM 753]
Length = 1457
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELG-CRLR 133
L L AD N A+Y L KL+L + K + AL L +A+ G+ AQY+LG L
Sbjct: 1267 LQLSADQGNQFAQYQLGKLYLG-EIEDIPKDIEKALSFLQLSADQGNQFAQYQLGRLYLG 1325
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD-CVKKDIASALWCFHRASEKG 192
+ D + Q+A +++ + DQ + A+Y LG +Y GD + KD+ AL+ ++E G
Sbjct: 1326 KDEDTPKDTQKALSFLQLSADQGNSFAMYQLGGLYFYGDEGIPKDMDKALFYLQASAELG 1385
Query: 193 HAGAAIAYGSLLLRGVQ 209
+ A ++ + RG Q
Sbjct: 1386 NE-YAQSFLDYIERGYQ 1401
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRV 134
L L AD N A+Y L KL+L + + + AL L +A+ G+ AQY+LG
Sbjct: 1082 LQLSADQGNQFAQYQLGKLYLG-EIEDIPRNIEKALSFLQLSADQGNQFAQYQLGRLYLG 1140
Query: 135 ENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYL-TGDCVKKDIASALWCFHRASEKG 192
EN+ + D ++A +++ + DQ + A Y LG +YL + + +DI L ++++G
Sbjct: 1141 ENENIPRDIEKALSFLQLSADQGNQFAQYQLGRLYLGENENIPRDIEKVLSFLQLSADQG 1200
Query: 193 HAGAAIAYGSLLL 205
+ A G L L
Sbjct: 1201 NQFAQYQLGRLYL 1213
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 77 LALEADNSNTHARYWLSKLHLKYH--VPGAC-KAMGAALLVDAANMGDPDAQYELGCRLR 133
L L AD N A+Y L +L+L + +P KA+ + L +A+ G+ AQY+LG
Sbjct: 1193 LQLSADQGNQFAQYQLGRLYLGENEDIPRDIEKAL--SFLQLSADQGNQFAQYQLGRLYL 1250
Query: 134 VEN-DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCVKKDIASALWCFHRASEK 191
EN D ++ ++A +++ + DQ + A Y LG +YL + + KDI AL ++++
Sbjct: 1251 GENEDIPRNIEKALSFLQLSADQGNQFAQYQLGKLYLGEIEDIPKDIEKALSFLQLSADQ 1310
Query: 192 GHAGAAIAYGSLLL 205
G+ A G L L
Sbjct: 1311 GNQFAQYQLGRLYL 1324
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 77 LALEADNSNTHARYWLSKLHLKYH--VPGAC-KAMGAALLVDAANMGDPDAQYELGCRLR 133
L L AD N A+Y L +L+L + +P KA+ + L +A+ G+ AQY+LG
Sbjct: 1008 LQLSADQGNQFAQYQLGRLYLGENEDIPRDIEKAL--SFLQLSADQGNQFAQYQLGRLYL 1065
Query: 134 VEN-DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCVKKDIASALWCFHRASEK 191
EN D ++ ++A +++ + DQ + A Y LG +YL + + ++I AL ++++
Sbjct: 1066 GENEDIPRNIEKALSFLQLSADQGNQFAQYQLGKLYLGEIEDIPRNIEKALSFLQLSADQ 1125
Query: 192 GHAGAAIAYGSLLL 205
G+ A G L L
Sbjct: 1126 GNQFAQYQLGRLYL 1139
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAF-YYIEKAVDQLHPG--ALYLLGTVYLTGD 172
A +MG+P A Y LG R Q+D+QAF ++ A D++ P A+Y LG +Y G
Sbjct: 782 AVDMGNPFAAYSLGSLYRRGEGVEQNDKQAFSLFLMAASDKISPNAYAMYQLGGMYQNGI 841
Query: 173 CVKKDIASALWCFHRA 188
++D+ + + RA
Sbjct: 842 GTEQDLKESERWYQRA 857
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 84 SNTHARYWLSKLHL-----KYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
NT A Y L L+ +Y++P + + AA + AQY+LG EN+
Sbjct: 905 GNTDAEYGLGCLYANPDFSEYNIPKSIEH-----FFKAAEAQNQFAQYQLGRLYLGENED 959
Query: 139 VQSD-QQAFYYIEKAVDQLHPGALYLLGTVYL-TGDCVKKDIASALWCFHRASEKGHAGA 196
+ D ++A +++ + DQ + A Y LG +YL + + +DI L ++++G+ A
Sbjct: 960 IPRDIEKALSFLQLSADQGNQFAQYQLGRLYLGENENIPRDIEKVLSFLQLSADQGNQFA 1019
Query: 197 AIAYGSLLL 205
G L L
Sbjct: 1020 QYQLGRLYL 1028
>gi|416337635|ref|ZP_11673998.1| hypothetical protein EcoM_03448 [Escherichia coli WV_060327]
gi|320194527|gb|EFW69158.1| hypothetical protein EcoM_03448 [Escherichia coli WV_060327]
Length = 649
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 385 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 444
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D + + ++E+ ++ A G + +G ++P+ +T
Sbjct: 445 GRGVDVDYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMT 489
>gi|384411624|ref|YP_005620989.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931998|gb|AEH62538.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 274
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G P AQY LG QSD+QA + +KA +Q A Y L Y TG V
Sbjct: 77 AANQGYPLAQYYLGNACLQGIGLTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVT 136
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A + F R++ +G A G + G +PE + AA K A+ + N
Sbjct: 137 QNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPEDHDRALFWFHKAADKGYADAQYN 196
Query: 236 L 236
L
Sbjct: 197 L 197
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G +AQY L Q+ QA ++ +++ +Q A + LG +Y G +
Sbjct: 113 AANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIP 172
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D AL+ FH+A++KG+A A G + G
Sbjct: 173 EDHDRALFWFHKAADKGYADAQYNLGLIYHEG 204
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+AN G AQ+ LG R + +A ++ KA D+ + A Y LG +Y G VK
Sbjct: 149 SANQGFVPAQFYLGVMYRNGAGIPEDHDRALFWFHKAADKGYADAQYNLGLIYHEGKVVK 208
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD A + + +A+ +G A G L+G V
Sbjct: 209 KDEKQATFWYQQAANQGLVEAEFNLGIAYLKGQGV 243
>gi|433210797|ref|ZP_20394429.1| hypothetical protein WI1_04569, partial [Escherichia coli KTE97]
gi|431725617|gb|ELJ89459.1| hypothetical protein WI1_04569, partial [Escherichia coli KTE97]
Length = 482
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D+QAF + +K+ +Q + A Y L T+Y+
Sbjct: 218 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYID 277
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D + + ++E+ ++ A G + +G ++P+ +T
Sbjct: 278 GRGVDVDYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMT 322
>gi|357054740|ref|ZP_09115821.1| hypothetical protein HMPREF9467_02793 [Clostridium clostridioforme
2_1_49FAA]
gi|355384044|gb|EHG31115.1| hypothetical protein HMPREF9467_02793 [Clostridium clostridioforme
2_1_49FAA]
Length = 951
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 84 SNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD- 142
N +A+Y L KL L+ +A+ A + AA G+ AQY LG R + +V D
Sbjct: 659 GNVNAQYALGKLWLENGTGDPEQAV--AWITKAAESGNAAAQYALGKVYR-DGIHVPRDM 715
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
++A ++ +Q + A Y LG +YL G+ + KD+ +A+ +S+ G+A A A G
Sbjct: 716 EKAVELFTQSAEQDNEYAAYQLGKLYLAGEDIPKDVEAAIRWLSFSSDSGNAYAQYALGK 775
Query: 203 LLLRGVQVPECLTK 216
+ L G VP+ + K
Sbjct: 776 VFLAGEDVPKDVRK 789
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A++ N A+Y L K++ HVP + L +A + A Y+LG D
Sbjct: 690 AESGNAAAQYALGKVYRDGIHVPRDMEK-AVELFTQSAEQDNEYAAYQLGKLYLAGEDIP 748
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+ + A ++ + D + A Y LG V+L G+ V KD+ A+ F ++E+ + AA
Sbjct: 749 KDVEAAIRWLSFSSDSGNAYAQYALGKVFLAGEDVPKDVRKAVSLFMESAEQKNEYAAYQ 808
Query: 200 YGSLLLRGVQVPE 212
G L L G +P+
Sbjct: 809 LGKLYLAGEDIPK 821
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYH-VPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVEND 137
A+ N +A Y L KL+L +P K + AA+ L +++ G+ AQY LG D
Sbjct: 726 AEQDNEYAAYQLGKLYLAGEDIP---KDVEAAIRWLSFSSDSGNAYAQYALGKVFLAGED 782
Query: 138 YVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
+ ++A ++ +Q + A Y LG +YL G+ + KD+ +A+ A+++ + A
Sbjct: 783 VPKDVRKAVSLFMESAEQKNEYAAYQLGKLYLAGEDIPKDVDTAIRWLTEAADQNNQYAQ 842
Query: 198 IAYGSLLLRGVQVP 211
G L L G VP
Sbjct: 843 YLLGKLYLCGRDVP 856
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 77 LALEADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE 135
L+ +D+ N +A+Y L K+ L VP + +L +++A + A Y+LG
Sbjct: 758 LSFSSDSGNAYAQYALGKVFLAGEDVPKDVRK-AVSLFMESAEQKNEYAAYQLGKLYLAG 816
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
D + A ++ +A DQ + A YLLG +YL G V +D A+ ++ +G+
Sbjct: 817 EDIPKDVDTAIRWLTEAADQNNQYAQYLLGKLYLCGRDVPRDREKAILFLQASAAQGN 874
>gi|260753303|ref|YP_003226196.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552666|gb|ACV75612.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 274
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G P AQY LG QSD+QA + +KA +Q A Y L Y TG V
Sbjct: 77 AANQGYPLAQYYLGNACLQGIGVTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVT 136
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A + F R++ +G A G + G +PE + AA K A+ + N
Sbjct: 137 QNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYN 196
Query: 236 L 236
L
Sbjct: 197 L 197
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G +AQY L Q+ QA ++ +++ +Q A + LG +Y G +
Sbjct: 113 AANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIP 172
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D AL+ FH+A++KG+A A G + G
Sbjct: 173 EDDDRALFWFHKAADKGYADAQYNLGLIYHEG 204
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+AN G AQ+ LG R + D +A ++ KA D+ + A Y LG +Y G VK
Sbjct: 149 SANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVK 208
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD A + + +A+ +G A G L+G V
Sbjct: 209 KDEKQATFWYQQAANQGLVEAEFNLGIAYLKGQGV 243
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+P AQ +LG Q +QA + +KA +Q +P A Y LG L G V +
Sbjct: 42 ARAGNPKAQTDLGTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGIGVTQ 101
Query: 177 DIASALWCFHRASEKGHAGA----AIAYGSLLLRGV 208
A+ + +A+ +G A A AIAY RGV
Sbjct: 102 SDEQAVSWYQKAANQGLAEAQYSLAIAY--YTGRGV 135
>gi|258545692|ref|ZP_05705926.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258519062|gb|EEV87921.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 499
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ+ LG Q+D++A + KA +Q H A LG +Y G V+
Sbjct: 33 AQQGDAAAQFRLGWMHANGRGTAQNDRRAVEWYSKAAEQGHAAAQCNLGWMYGQGRGVEI 92
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A + F RA+ +G A G+L + G VP+ + V AA++ + NL
Sbjct: 93 DDEQAAYWFERAATQGDKQAQFNLGNLYIAGQGVPQDERRAAFWFVQAAQQGDVEAQFNL 152
Query: 237 MN----------PVEKAKEQFEVAAQAG-----CNLGL 259
N +A FE AAQ G CNL +
Sbjct: 153 GNLYFHGNGVTQDDRRAVRWFEKAAQQGYAKAQCNLAM 190
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A V AA GD +AQ+ LG N Q D++A + EKA Q + A L +Y
Sbjct: 134 AFWFVQAAQQGDVEAQFNLGNLYFHGNGVTQDDRRAVRWFEKAAQQGYAKAQCNLAMMYE 193
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G V +D A + A+E+G + A G L +G+ V +
Sbjct: 194 RGRGVAQDAEQAAEWYGCAAEQGDSKAQYRLGLLYDKGIGVAQ 236
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 15/137 (10%)
Query: 91 WLSKLHLKYHVPGACK-----AMGAALLVD----------AANMGDPDAQYELGCRLRVE 135
W SK + H C G + +D AA GD AQ+ LG
Sbjct: 64 WYSKAAEQGHAAAQCNLGWMYGQGRGVEIDDEQAAYWFERAATQGDKQAQFNLGNLYIAG 123
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
Q +++A ++ +A Q A + LG +Y G+ V +D A+ F +A+++G+A
Sbjct: 124 QGVPQDERRAAFWFVQAAQQGDVEAQFNLGNLYFHGNGVTQDDRRAVRWFEKAAQQGYAK 183
Query: 196 AAIAYGSLLLRGVQVPE 212
A + RG V +
Sbjct: 184 AQCNLAMMYERGRGVAQ 200
>gi|409400639|ref|ZP_11250655.1| hypothetical protein MXAZACID_06651, partial [Acidocella sp.
MX-AZ02]
gi|409130420|gb|EKN00187.1| hypothetical protein MXAZACID_06651, partial [Acidocella sp.
MX-AZ02]
Length = 265
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A A+ AA +G+ DAQY L + Q A Y+ KA +Q +P A LG
Sbjct: 37 ATAASWYGRAAPLGNEDAQYRLAVMYQTGTGVAADAQAADYWFAKAANQGNPDAALALGN 96
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
Y G V KD A A F +A++ G+A A + G G+ V + TK AA+
Sbjct: 97 AYTNGTGVPKDDAKASEWFAKAADAGNAEAQNSLGYNYNAGLGVKQDYTKAAQYFTEAAQ 156
Query: 227 KARANLESNLMN 238
+ + NL N
Sbjct: 157 QGNVKAQFNLGN 168
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AAN G+PDA LG + D +A + KA D + A LG Y G
Sbjct: 79 FAKAANQGNPDAALALGNAYTNGTGVPKDDAKASEWFAKAADAGNAEAQNSLGYNYNAGL 138
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
VK+D A F A+++G+ A G+ G VP+
Sbjct: 139 GVKQDYTKAAQYFTEAAQQGNVKAQFNLGNYYAHGYGVPQS 179
>gi|431793712|ref|YP_007220617.1| hypothetical protein Desdi_1745 [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783938|gb|AGA69221.1| TPR repeat-containing protein [Desulfitobacterium dichloroeliminans
LMG P-21439]
Length = 889
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 71 AKENFELA------LEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDP 122
A+ NFE A LE + + +Y L ++ Y G K + AA+ L AA +G+
Sbjct: 612 AELNFEEAFYGFQRLEEQSHDDKLQYRLGQM--LYTGTGTDKDVEAAIEYLEKAARLGNV 669
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
AQY LG E+ ++ ++A ++ KA D + A Y LG +Y G V+KDIA A+
Sbjct: 670 HAQYMLGKVYLDEDGRHRNPEKAVLWLTKAADNGNGLAQYALGKLYRDGLYVEKDIAKAV 729
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
F +A+E+ ++ A G L L G VP
Sbjct: 730 ELFTKAAEQNNSFAQYQLGKLYLLGQDVP 758
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-Q 143
N HA+Y L K++L L AA+ G+ AQY LG +L + YV+ D
Sbjct: 668 NVHAQYMLGKVYLDEDGRHRNPEKAVLWLTKAADNGNGLAQYALG-KLYRDGLYVEKDIA 726
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+A KA +Q + A Y LG +YL G V KD+ +A+ ++E G+ + A G L
Sbjct: 727 KAVELFTKAAEQNNSFAQYQLGKLYLLGQDVPKDVEAAVKWLTLSAELGNQYSQYALGKL 786
Query: 204 LLRGVQVP 211
L G VP
Sbjct: 787 YLMGRGVP 794
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
D QY LG L + + A Y+EKA + A Y+LG VYL D ++
Sbjct: 632 DDKLQYRLGQMLYTGTGTDKDVEAAIEYLEKAARLGNVHAQYMLGKVYLDEDGRHRNPEK 691
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+ +A++ G+ A A G L G+ V + + K
Sbjct: 692 AVLWLTKAADNGNGLAQYALGKLYRDGLYVEKDIAK 727
>gi|325185539|emb|CCA20021.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 782
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCV 174
AA G PDAQY L Q D + Y+++A +Q A+ LG VYL G +
Sbjct: 438 AAQAGHPDAQYSYSLLLMHGTGVDQDDISSVKYMQEAAEQGQSHAMLSLGQVYLQGYGPL 497
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
KK++ A++ A E G+ A I G L L G + E +L K +SAA + A
Sbjct: 498 KKNVTMAIYYLQMALENGNQEAHITLGDLYLHGDGLVEQDLELALKHLSAAAEVEA 553
>gi|397677072|ref|YP_006518610.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397761|gb|AFN57088.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 336
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AAN G+ AQ LG + ++A Y+ ++A ++ HP A +LG +Y G
Sbjct: 134 LYQQAANQGNAQAQLNLGLMFSRGDGAALDKEKALYWYQQAAEKGHPQAELILGNLYYNG 193
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+ V D + A + +A+ +G+A A + G + G VP K + AA++ A
Sbjct: 194 ETVPLDKSKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDAQ 253
Query: 232 LESNLMN 238
E +L N
Sbjct: 254 AEYSLGN 260
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 38/213 (17%)
Query: 66 PLLKTAKENFELALE---ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDP 122
P KT +E +LAL+ D+SN K+ L+ AAN G
Sbjct: 31 PTAKTPQEELKLALKYAHGDSSNID------------------KSKAFNLIQQAANKGFA 72
Query: 123 DAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
A+Y LG + + V +D+ +A Y+ ++AV A + LG +Y GD + D + +
Sbjct: 73 PAEYALGT-FYYKGEAVAADKSKALYWYQQAVTHGDADAAFALGNMYYNGDSIAPDKSKS 131
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN--- 238
+ + +A+ +G+A A + G + RG K AA+K E L N
Sbjct: 132 VDLYQQAANQGNAQAQLNLGLMFSRGDGAALDKEKALYWYQQAAEKGHPQAELILGNLYY 191
Query: 239 -----PVEKAK--EQFEVAAQAG-----CNLGL 259
P++K+K E ++ AA G NLGL
Sbjct: 192 NGETVPLDKSKAFEWYQKAANQGNAAAELNLGL 224
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A+ LG + D V D+ ++ + +KA +Q A Y LG +Y GD +
Sbjct: 210 AANQGNAAAELNLGL-MYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGI 268
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D A AL + +A+ G A A +A G + G V
Sbjct: 269 AVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGV 304
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G P A+ LG L + V D+ +AF + +KA +Q + A LG +Y GD V
Sbjct: 174 AAEKGHPQAELILG-NLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGLMYAHGDGV 232
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
D +L + +A+E+G A A + G++ G
Sbjct: 233 PLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNG 265
>gi|386815241|ref|ZP_10102459.1| Sel1 domain protein repeat-containing protein [Thiothrix nivea DSM
5205]
gi|386419817|gb|EIJ33652.1| Sel1 domain protein repeat-containing protein [Thiothrix nivea DSM
5205]
Length = 464
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 77 LALEADNSNTHARYWLSK------------LHLKYHV---PGACKAMGAALLVDAANMGD 121
L+L+A + ARYWL + L L Y P A A AA G
Sbjct: 146 LSLQAFHDVEKARYWLEQAAQQQDVEAQYNLALLYDFSIDPQADSEEAAYWYTRAAQNGH 205
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
DAQ++LG R ++ QA Y+ KA Q P A + L +Y G+ V K++ A
Sbjct: 206 SDAQFDLGVRYLQGKAQNKNLTQAAYWFRKAAQQGDPAAAFNLALMYDNGEGVGKNLPEA 265
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ + +A+++G GA G L G +P+
Sbjct: 266 IRWYRQAAQQGENGAQYNLGVKYLLGESLPQ 296
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQY LG + + Q ++ +I KA + +P A Y L + G +
Sbjct: 272 AAQQGENGAQYNLGVKYLLGESLPQDHEKGINWIRKAAEGGNPAAQYTLAYMLDQGKDLP 331
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD AL+ + +++ +G+ A + G V
Sbjct: 332 KDDTQALYWYRQSAAQGYTNAQTGLAIMFANGQGV 366
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+E A + +P ALY L +Y TG VK+D A + RA+++GH + G L L+
Sbjct: 92 LEHAAELDYPPALYELAHLYETGSYVKQDNTKAASLYERAAKQGHVDSQYNLGVLSLQAF 151
Query: 209 QVPE----CLTKLNAKRVSAAKKARANLESNLMNP---VEKAKEQFEVAAQAG-----CN 256
E L + ++ A+ A L ++P E+A + AAQ G +
Sbjct: 152 HDVEKARYWLEQAAQQQDVEAQYNLALLYDFSIDPQADSEEAAYWYTRAAQNGHSDAQFD 211
Query: 257 LGLRWLQ 263
LG+R+LQ
Sbjct: 212 LGVRYLQ 218
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+P AQY L L D + D QA Y+ ++ Q + A L ++ G V+
Sbjct: 308 AAEGGNPAAQYTLAYMLDQGKDLPKDDTQALYWYRQSAAQGYTNAQTGLAIMFANGQGVQ 367
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
D A+ F +A++ G+A A G+ + GV
Sbjct: 368 ADPEEAIRWFQKAADAGNAAAQFNLGTCMAHGV 400
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 110 AALLVDAANMGDPDAQYELGC-RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
A+L AA G D+QY LG L+ +D ++A Y++E+A Q A Y L +Y
Sbjct: 125 ASLYERAAKQGHVDSQYNLGVLSLQAFHDV----EKARYWLEQAAQQQDVEAQYNLALLY 180
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ D A + + RA++ GH+ A G L+G + LT+
Sbjct: 181 DFSIDPQADSEEAAYWYTRAAQNGHSDAQFDLGVRYLQGKAQNKNLTQ 228
>gi|343515268|ref|ZP_08752327.1| Sel1 domain-containing protein [Vibrio sp. N418]
gi|342798800|gb|EGU34398.1| Sel1 domain-containing protein [Vibrio sp. N418]
Length = 443
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 91/231 (39%), Gaps = 45/231 (19%)
Query: 57 CELNDRRLIPLLKTAKENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAA 111
+LN R++ + +EN + ALE A+ N A+Y ++ + L Y + G + +GAA
Sbjct: 138 AQLNVGRMLEFAQGVEENLQQALEWYHKAAEQGNAEAQYNMATM-LAYGI-GTDEDLGAA 195
Query: 112 LL--------------------------------------VDAANMGDPDAQYELGCRLR 133
L + AA G +AQ+ L L
Sbjct: 196 LYWYYQAAEQNHLEAQYSVALMLELGKGVEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLY 255
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
D ++ AF + +A +Q H A Y +G +Y G + + A +H A+E GH
Sbjct: 256 FGADIEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGLGTEPNKTKAFIWYHHAAENGH 315
Query: 194 AGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAK 244
A A + SL GV P + V AAK+ + NL +E K
Sbjct: 316 ADAQFSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGK 366
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 75 FELALEA-DNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR 133
FEL +A + ++ A+Y+LS ++ KA + AA G+ AQY L
Sbjct: 52 FELFSQAATDGHSEAQYYLSHMYYFGETTPVDKAQATRWMEQAAEQGNGRAQYHLATMYY 111
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ ++ AF++ KA +Q H A +G + V++++ AL +H+A+E+G+
Sbjct: 112 HGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQALEWYHKAAEQGN 171
Query: 194 AGAAIAYGSLLLRGVQVPECL 214
A A ++L G+ E L
Sbjct: 172 AEAQYNMATMLAYGIGTDEDL 192
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G +AQY L QA ++E+A +Q + A Y L T+Y G
Sbjct: 54 LFSQAATDGHSEAQYYLSHMYYFGETTPVDKAQATRWMEQAAEQGNGRAQYHLATMYYHG 113
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
D + ++ + A + +A+E+GHA A + G +L V E L + AA++ A
Sbjct: 114 DGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQALEWYHKAAEQGNAE 173
Query: 232 LESNL 236
+ N+
Sbjct: 174 AQYNM 178
>gi|255068259|ref|ZP_05320114.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
gi|255047451|gb|EET42915.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
Length = 126
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q D QA + KA +Q H A Y LG Y+ G V+
Sbjct: 35 AAEQGFAAAQYNLGVMYDNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAYINGQGVR 94
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A A+ F +A+E+G+A A G + +G
Sbjct: 95 QDYAQAVQWFGKAAEQGYAKAQYNLGVMYDKG 126
>gi|432713475|ref|ZP_19948516.1| hypothetical protein WCI_01840 [Escherichia coli KTE8]
gi|431257278|gb|ELF50202.1| hypothetical protein WCI_01840 [Escherichia coli KTE8]
Length = 649
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L ++AAN P AQ+ L C R D QAF + +K+ +Q + A Y L T+Y+
Sbjct: 385 SLYLNAANKNHPLAQHSLACMYRDGEGVEVDDGQAFKWCQKSAEQGYAEAQYHLATMYID 444
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
G V D ++ + ++++ ++ A G + +G ++P+ +T
Sbjct: 445 GRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMT 489
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY L + ++ V D QQ Y++ + DQ + A LG +Y G +
Sbjct: 426 SAEQGYAEAQYHLAT-MYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEI 484
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D+ A+ A++ G AA+ G L + G
Sbjct: 485 PQDMTMAINLLKSAADHGDIDAALVLGQLYVHG 517
>gi|397689630|ref|YP_006526884.1| Sel1 domain-containing protein [Melioribacter roseus P3M]
gi|395811122|gb|AFN73871.1| Sel1 domain-containing protein [Melioribacter roseus P3M]
Length = 506
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
+ +LV+ AN GDP AQ+ELG R + + +A Y+I KA DQ A Y G +
Sbjct: 49 LAGYILVNEANRGDPFAQHELGIRYLIGKGFEPDTVKAIYWIRKAADQNLAAAKYNYGIL 108
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
G V + + + F A+E G A A G + + V +K A AAK
Sbjct: 109 LYNGIGVPWNPFESFYNFKSAAELGMPEAQFALGIMYTDNLVVSRDYSKAYAYIRKAAK 167
>gi|422021694|ref|ZP_16368204.1| Sel1 domain-containing protein repeat-containing protein
[Providencia sneebia DSM 19967]
gi|414098291|gb|EKT59940.1| Sel1 domain-containing protein repeat-containing protein
[Providencia sneebia DSM 19967]
Length = 306
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQY+L Q D+QAF + +KA DQ A Y LG +Y+ G VK
Sbjct: 174 AANQGLASAQYDLSLLYSDGLGVKQDDEQAFRWTKKAADQGFTHAQYNLGVMYMDGIGVK 233
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A +A+EKG A A G L G V +
Sbjct: 234 QDYKQAFLWTQQAAEKGFAKAQYNLGILYYSGSGVTQ 270
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD ++Q LG N+ Q +AF +I+KA DQ H GA +LG +Y G+ +K
Sbjct: 31 AAEQGDANSQAILGTMYYDGNEVAQDYNRAFLWIKKAADQGHAGAQGILGKMYFDGNGMK 90
Query: 176 KDIASALWCFHRASEKG 192
KD + +A+E+G
Sbjct: 91 KDYNLSFLWMTKAAEQG 107
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG R N + QAF +I+KA +Q A Y L +Y G VK
Sbjct: 138 AALQGFAIAQGNLGSLYRDGNGVKKDVHQAFLWIQKAANQGLASAQYDLSLLYSDGLGVK 197
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A +A+++G A G + + G+ V + + AA+K A + N
Sbjct: 198 QDDEQAFRWTKKAADQGFTHAQYNLGVMYMDGIGVKQDYKQAFLWTQQAAEKGFAKAQYN 257
Query: 236 L 236
L
Sbjct: 258 L 258
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ AA GD +AQ LG + + Q +Q F + +KA Q A LG++Y G+
Sbjct: 100 MTKAAEQGDVEAQSNLGFLYSTDGE-KQDYEQVFLWTQKAALQGFAIAQGNLGSLYRDGN 158
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
VKKD+ A +A+ +G A A L G+ V +
Sbjct: 159 GVKKDVHQAFLWIQKAANQGLASAQYDLSLLYSDGLGVKQ 198
>gi|397676941|ref|YP_006518479.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397630|gb|AFN56957.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 274
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G P AQY LG QSD+QA + +KA +Q A Y L Y TG V
Sbjct: 77 AANQGYPLAQYYLGNACLQGIGLTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVT 136
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A + F R++ +G A G + G +PE + AA K A+ + N
Sbjct: 137 QNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYN 196
Query: 236 L 236
L
Sbjct: 197 L 197
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G +AQY L Q+ QA ++ +++ +Q A + LG +Y G +
Sbjct: 113 AANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIP 172
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D AL+ FH+A++KG+A A G + G
Sbjct: 173 EDDDRALFWFHKAADKGYADAQYNLGLIYHEG 204
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+AN G AQ+ LG R + D +A ++ KA D+ + A Y LG +Y G VK
Sbjct: 149 SANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVK 208
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD A + + +A+ +G A G L+G V
Sbjct: 209 KDEKQAAFWYQQAANQGLVEAEFNLGIAYLKGQGV 243
>gi|68249923|ref|YP_249035.1| hypothetical protein NTHI1571 [Haemophilus influenzae 86-028NP]
gi|68058122|gb|AAX88375.1| hypothetical protein NTHI1571 [Haemophilus influenzae 86-028NP]
Length = 183
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A GD + Q+ LG Q D +A + KA +Q A LG Y G
Sbjct: 51 LWLPLAEQGDANVQFNLGVMYAEGQGVKQDDFEAVKWYRKAAEQGDANAQAYLGLAYTEG 110
Query: 172 DCVKKDIASALWCFHRASEKGHAGAA--IAYGSLLLRGVQVPECLTK 216
V++D A+ F +A+E+GHA A + + LL +GVQV + L K
Sbjct: 111 RGVRQDYTEAVKWFRKAAEQGHANAQAILGFSYLLGKGVQVNKSLAK 157
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +AQ LG Q +A + KA +Q H A +LG YL G V+
Sbjct: 91 AAEQGDANAQAYLGLAYTEGRGVRQDYTEAVKWFRKAAEQGHANAQAILGFSYLLGKGVQ 150
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSL 203
+ + A F +A + G G YG L
Sbjct: 151 VNKSLAKEWFGKACDNGDQGGCKYYGKL 178
>gi|350272639|ref|YP_004883947.1| hypothetical protein OBV_42430 [Oscillibacter valericigenes
Sjm18-20]
gi|348597481|dbj|BAL01442.1| hypothetical protein OBV_42430 [Oscillibacter valericigenes
Sjm18-20]
Length = 1003
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-Q 143
N HA+Y L K++L L+ +A+ G+ AQY LG +L + ++V+ D
Sbjct: 674 NIHAQYMLGKIYLDADSGHENAEQAINWLMKSADGGNALAQYALG-KLYRDGNHVEKDIG 732
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QA + + +Q + A Y LG +YL + + +++ +A+ ++++ G+ A A L
Sbjct: 733 QAIAFFTSSAEQDNSYAAYALGKLYLQEESILENVDTAVKWLKKSADLGNQFAQYALAKL 792
Query: 204 LLRGVQVPECLTK 216
L GV++P+ + K
Sbjct: 793 YLYGVEIPKNIPK 805
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 81 ADNSNTHARYWLSKLHL-----KYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE 135
AD N A+Y L+KL+L ++P A + L +A G+ AQY+LG +L ++
Sbjct: 778 ADLGNQFAQYALAKLYLYGVEIPKNIPKALE-----LFQKSAEQGNQYAQYQLG-KLYLQ 831
Query: 136 NDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
+ + D + A ++ + +Q + A Y LG +YL + + K+ +A+ ++E+G+
Sbjct: 832 EESIPKDAEAAIRWLTASAEQGNQYAQYQLGKLYLQEESIPKNAEAAIRWLTVSAEQGNQ 891
Query: 195 GAAIAYGSLLLRGVQVP 211
A G L L G VP
Sbjct: 892 YAQYVLGKLYLMGDDVP 908
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 70 TAKENFELAL-----EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDA 124
+ EN E A+ AD N A+Y L KL+ + A +A + A
Sbjct: 690 SGHENAEQAINWLMKSADGGNALAQYALGKLYRDGNHVEKDIGQAIAFFTSSAEQDNSYA 749
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
Y LG E +++ A +++K+ D + A Y L +YL G + K+I AL
Sbjct: 750 AYALGKLYLQEESILENVDTAVKWLKKSADLGNQFAQYALAKLYLYGVEIPKNIPKALEL 809
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVP 211
F +++E+G+ A G L L+ +P
Sbjct: 810 FQKSAEQGNQYAQYQLGKLYLQEESIP 836
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 81 ADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N +A+Y L KL+L+ +P +A L +A G+ AQY+LG E
Sbjct: 814 AEQGNQYAQYQLGKLYLQEESIPKDAEA-AIRWLTASAEQGNQYAQYQLGKLYLQEESIP 872
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
++ + A ++ + +Q + A Y+LG +YL GD V +D +A+ ++E+G+
Sbjct: 873 KNAEAAIRWLTVSAEQGNQYAQYVLGKLYLMGDDVPRDKETAVRWLTLSAEQGN 926
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ N++A Y L KL+L+ L +A++G+ AQY L + +
Sbjct: 742 AEQDNSYAAYALGKLYLQEESILENVDTAVKWLKKSADLGNQFAQYALAKLYLYGVEIPK 801
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+ +A +K+ +Q + A Y LG +YL + + KD +A+ ++E+G+ A
Sbjct: 802 NIPKALELFQKSAEQGNQYAQYQLGKLYLQEESIPKDAEAAIRWLTASAEQGNQYAQYQL 861
Query: 201 GSLLLRGVQVP 211
G L L+ +P
Sbjct: 862 GKLYLQEESIP 872
>gi|339481796|ref|YP_004693582.1| Sel1 domain-containing protein [Nitrosomonas sp. Is79A3]
gi|338803941|gb|AEJ00183.1| Sel1 domain protein repeat-containing protein [Nitrosomonas sp.
Is79A3]
Length = 200
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR----VEN 136
A+ +T A++ L + K A + AA G AQY LG V
Sbjct: 28 AEQGHTGAQFNLGNAYYKGEGVSKDYAQAVSWYRKAAEQGLAVAQYSLGNEYYRGKAVPK 87
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
DYVQ+ + KA +Q + A Y LG +Y++G+ V +D A A F A+E+GHAGA
Sbjct: 88 DYVQAAS----WFRKAAEQGYDRAQYDLGMLYVSGEGVPQDDAKAASWFREAAEQGHAGA 143
Query: 197 AIAYGSLLLRGVQVPECLTK 216
G G VP L +
Sbjct: 144 QYDLGLFYESGKGVPYDLVQ 163
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY Q+ + KA +Q H GA + LG Y G+ V KD A A+ + +A+E+G
Sbjct: 13 VSKDYAQAAS----WYRKAAEQGHTGAQFNLGNAYYKGEGVSKDYAQAVSWYRKAAEQGL 68
Query: 194 AGAAIAYGSLLLRGVQVPE 212
A A + G+ RG VP+
Sbjct: 69 AVAQYSLGNEYYRGKAVPK 87
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
A+ AA G AQY+LG L V + V Q D +A + +A +Q H GA Y LG Y
Sbjct: 93 ASWFRKAAEQGYDRAQYDLGM-LYVSGEGVPQDDAKAASWFREAAEQGHAGAQYDLGLFY 151
Query: 169 LTGDCVKKDIASALWCFHRASEKGH 193
+G V D+ A + +A+++GH
Sbjct: 152 ESGKGVPYDLVQAKSWYRKAADQGH 176
>gi|340363638|ref|ZP_08685961.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|419798040|ref|ZP_14323483.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|339885317|gb|EGQ75046.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|385696381|gb|EIG26870.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 271
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q D QA + KA +Q H A Y LG Y+ G V+
Sbjct: 35 AAEQGFAAAQYNLGVMYDNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAYINGQGVR 94
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ F +A+E+G+A A G + +G V + + AA++ A + N
Sbjct: 95 QDDAQAVQWFGKAAEQGYAKAQYNLGVMYDKGEGVRQDHAQAVQWYRKAAEQGDAPAQYN 154
Query: 236 L 236
L
Sbjct: 155 L 155
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY LG Q D QA + KA Q H A Y LG +Y G V
Sbjct: 143 AAEQGDAPAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLGGMYANGKGVL 202
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+++ A + +A+E+G A A G + G V +
Sbjct: 203 QNLVQAEQWYRKAAEQGIAEAQYNLGVMYDNGQGVRQ 239
>gi|163800487|ref|ZP_02194388.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
gi|159175930|gb|EDP60724.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
Length = 993
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A +GD AQ +LG + + VQ QA Y+ KA +Q H A LG +Y G V +
Sbjct: 36 AELGDAKAQNKLGNIYKNGDGVVQDHSQAVYWYTKAAEQGHTIAQTNLGWMYEAGKGVSQ 95
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
D A A++ + +A+E+G+ A G + G VP+ T+
Sbjct: 96 DDAQAVYWYRKAAEQGYPKAQTNLGWMYEYGEGVPKDDTQ 135
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ LG + D QA Y+ KA +Q + A LG +Y G V
Sbjct: 107 AAEQGYPKAQTNLGWMYEYGEGVPKDDTQALYWYRKAAEQEYARAQNRLGRMYDMGKGVP 166
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
D A++ + +A+E+G+ A G++ G VP+ +T+ +A + ++N
Sbjct: 167 LDDTQAVYWYGKAAEQGYERAQNNLGTMYEEGEGVPQDMTRAVYWYKKSADQGYVTGQTN 226
Query: 236 LMNPVEKAK 244
L EK K
Sbjct: 227 LGWMYEKGK 235
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%)
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
D QA Y+ KA +Q + A LGT+Y G+ V +D+ A++ + +++++G+
Sbjct: 168 DDTQAVYWYGKAAEQGYERAQNNLGTMYEEGEGVPQDMTRAVYWYKKSADQGYVTGQTNL 227
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAK 244
G + +G VP+ T+ + AAK+ A ++NL EK K
Sbjct: 228 GWMYEKGKGVPKDDTQAVSWYRKAAKQGYARAQTNLGWMYEKGK 271
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG Q +QA Y+ KA +Q + LG +Y G V
Sbjct: 431 AAEQGDDTAQNNLGWMYEEGKGVPQDYKQAVYWYRKAAEQGYARGQTNLGWMYEEGKGVP 490
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G A G + G VP+ + + AA++ A ++N
Sbjct: 491 QDDVQAVSWYRKAAEQGLATGQANLGWMYREGKGVPQDDKQAVSWYRKAAEQGYARGQTN 550
Query: 236 LMNPVEKAK 244
L EK K
Sbjct: 551 LGWMYEKGK 559
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G Q LG Q ++QA + +KA DQ A LG++Y G V
Sbjct: 611 AAEQGSVIGQVNLGWMYEQGKGVPQDNKQAVSWYQKAADQGDADAQNSLGSMYEEGKGVL 670
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES- 234
+D A+ + +A+E+GH G + G VP T+ A+K ++ +S
Sbjct: 671 QDYKQAVSWYRKAAEQGHELGQSNLGKMYTEGKGVPRDATQAIYWYQKASKLEHSHTQSD 730
Query: 235 ----NLMNPVEKAKEQFEVA 250
N++N + A E EVA
Sbjct: 731 AIYDNVINELFNADEVGEVA 750
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G Q LG Q D+QA + KA +Q A LG +Y G V
Sbjct: 395 AAEQGYARGQTNLGWMYEKGKGVPQDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVP 454
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ + +A+E+G+A G + G VP+ + + AA++ A ++N
Sbjct: 455 QDYKQAVYWYRKAAEQGYARGQTNLGWMYEEGKGVPQDDVQAVSWYRKAAEQGLATGQAN 514
Query: 236 L 236
L
Sbjct: 515 L 515
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG Q + QA + KAV Q + A LG +Y G V
Sbjct: 251 AAKQGYARAQTNLGWMYEKGKGVPQDNMQAVDWYRKAVKQDYARAQSYLGWMYEEGKGVP 310
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ F +A+E+G+A G + G VP+ + + AA+ A ++N
Sbjct: 311 QDDIQAVFLFRKAAEQGYARGQTNLGWMYEEGKGVPQDDVQAVSWYRKAAELGFATGQAN 370
Query: 236 L 236
L
Sbjct: 371 L 371
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVP-----GACKAMGAALLVD----------AANM 119
+E +T A YW K + + G MG + +D AA
Sbjct: 123 YEYGEGVPKDDTQALYWYRKAAEQEYARAQNRLGRMYDMGKGVPLDDTQAVYWYGKAAEQ 182
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G AQ LG Q +A Y+ +K+ DQ + LG +Y G V KD
Sbjct: 183 GYERAQNNLGTMYEEGEGVPQDMTRAVYWYKKSADQGYVTGQTNLGWMYEKGKGVPKDDT 242
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
A+ + +A+++G+A A G + +G VP+
Sbjct: 243 QAVSWYRKAAKQGYARAQTNLGWMYEKGKGVPQ 275
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G Q LG Q D+QA + KA +Q A LG +Y G V
Sbjct: 539 AAEQGYARGQTNLGWMYEKGKGVPQDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVP 598
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G + G + +G VP+ + + AA + A+ +++
Sbjct: 599 QDNKQAVSWYRKAAEQGSVIGQVNLGWMYEQGKGVPQDNKQAVSWYQKAADQGDADAQNS 658
Query: 236 LMNPVEKAK----------EQFEVAAQAGCNLGLRWLQRIEEEEKRLLTESSR 278
L + E+ K + AA+ G LG L ++ E K + ++++
Sbjct: 659 LGSMYEEGKGVLQDYKQAVSWYRKAAEQGHELGQSNLGKMYTEGKGVPRDATQ 711
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G Q LG R Q ++QA + KA +Q + LG +Y G V
Sbjct: 359 AAELGFATGQANLGWMYREGRGVPQDNKQAVSWYRKAAEQGYARGQTNLGWMYEKGKGVP 418
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G A G + G VP+ + AA++ A ++N
Sbjct: 419 QDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVPQDYKQAVYWYRKAAEQGYARGQTN 478
Query: 236 LMNPVEKAK 244
L E+ K
Sbjct: 479 LGWMYEEGK 487
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G Q LG R Q D+QA + KA +Q + LG +Y G V
Sbjct: 503 AAEQGLATGQANLGWMYREGKGVPQDDKQAVSWYRKAAEQGYARGQTNLGWMYEKGKGVP 562
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
+D A+ + +A+E+G A G + G VP+ N + VS +KA
Sbjct: 563 QDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVPQD----NKQAVSWYRKA 611
>gi|260768689|ref|ZP_05877623.1| hypothetical protein VFA_001744 [Vibrio furnissii CIP 102972]
gi|260616719|gb|EEX41904.1| hypothetical protein VFA_001744 [Vibrio furnissii CIP 102972]
Length = 339
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AN GD +AQY+L + ++ S AFY+ ++A + H A+ L Y+ G
Sbjct: 27 LITLANQGDRNAQYQLAVDYQRGHNTPVSQDDAFYWFQQAAEAGHTPAMVQLANAYVAGT 86
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
KDI AL+ ++ G+ AA+ G L Q P
Sbjct: 87 GTDKDIHKALFWLIKSLVDGNQSAAVHIGQLYQSLTQSP 125
>gi|46445788|ref|YP_007153.1| hypothetical protein pc0154 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399429|emb|CAF22878.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 299
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 54/125 (43%)
Query: 79 LEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
L AD + A+Y L ++ A AA+ GD DAQYELG R
Sbjct: 175 LAADQGDADAQYNLGVIYANGQGITQSDAEAFKYFKLAADQGDADAQYELGVRYANGQGI 234
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
QSD +AF Y + A DQ A Y L Y G V + A F A+++G A A
Sbjct: 235 TQSDTEAFKYFKLAADQGDADAQYNLEVRYSNGRGVIQSDQEAFKYFKLAADQGDADAQY 294
Query: 199 AYGSL 203
G+L
Sbjct: 295 ELGTL 299
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A+ GD AQY+LG QSD +AF Y + A DQ H A Y LG +Y G + +
Sbjct: 105 ADQGDAKAQYKLGVIYANGRGITQSDTEAFKYFKLAADQGHAVAQYNLGVIYDNGQGITQ 164
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
A+ + A+++G A A G + G + +
Sbjct: 165 SEQEAIKYYKLAADQGDADAQYNLGVIYANGQGITQS 201
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQY LG QS+Q+A Y + A DQ A Y LG +Y G +
Sbjct: 140 AADQGHAVAQYNLGVIYDNGQGITQSEQEAIKYYKLAADQGDADAQYNLGVIYANGQGIT 199
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A A F A+++G A A G G + + T+ AA + A+ + N
Sbjct: 200 QSDAEAFKYFKLAADQGDADAQYELGVRYANGQGITQSDTEAFKYFKLAADQGDADAQYN 259
Query: 236 L 236
L
Sbjct: 260 L 260
>gi|148826087|ref|YP_001290840.1| Sel1 domain-containing protein [Haemophilus influenzae PittEE]
gi|148716247|gb|ABQ98457.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae PittEE]
Length = 384
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q + A + LG +Y G VK
Sbjct: 184 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVK 243
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+GHA A G++ G V + + AA++ A+ ++N
Sbjct: 244 QDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQAN 303
Query: 236 L 236
L
Sbjct: 304 L 304
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q + A + LG +Y G VK
Sbjct: 148 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVK 207
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G+A A G++ G V + + AA++ A + N
Sbjct: 208 QDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYN 267
Query: 236 LMN 238
L N
Sbjct: 268 LGN 270
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q H A Y LG +Y G VK
Sbjct: 220 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 279
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +A+E+G+A A GS G V +
Sbjct: 280 QDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVRQ 316
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ AQ+ LG V+ DY + A + KA +Q + A + LG +Y G
Sbjct: 112 AAEQGNAKAQFNLGLMYDNGRGVKQDYFE----AVKWFRKAAEQGYADAQFNLGNMYYNG 167
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
VK+D A+ + +A+E+G+A A G++ G V + + AA++ A+
Sbjct: 168 HGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYAD 227
Query: 232 LESNLMN 238
+ NL N
Sbjct: 228 AQFNLGN 234
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ G Q D +A + +A +Q + A + LG +Y G VK
Sbjct: 76 AAEQGVADAQLNWGNMYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVK 135
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ F +A+E+G+A A G++ G V + + AA++ A+ + N
Sbjct: 136 QDYFEAVKWFRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFN 195
Query: 236 LMN 238
L N
Sbjct: 196 LGN 198
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY LG V+ DY + A + KA +Q + A LG+ Y G
Sbjct: 256 AAEQGHAKAQYNLGNMYANGRGVKQDYFE----AVKWYRKAAEQGYADAQANLGSAYSAG 311
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYG--SLLLRGVQVPECLTK 216
V++D A+ F +A+E G A G L+ +G+Q L K
Sbjct: 312 HGVRQDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAK 358
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A G+ Q+ LG + Q D +A + KA +Q A G +Y G
Sbjct: 36 LWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQGVADAQLNWGNMYAKG 95
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
VK+D A+ + +A+E+G+A A G + G V + + AA++ A+
Sbjct: 96 LGVKQDDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQGYAD 155
Query: 232 LESNLMN 238
+ NL N
Sbjct: 156 AQFNLGN 162
>gi|354594571|ref|ZP_09012610.1| hypothetical protein CIN_13060 [Commensalibacter intestini A911]
gi|353672247|gb|EHD13947.1| hypothetical protein CIN_13060 [Commensalibacter intestini A911]
Length = 256
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G+ DAQ++LG N + Q+ ++AF Y +KA DQ A Y LG +Y G
Sbjct: 20 LTKAAEHGNADAQFKLGVLYDEGNVFPQNSEKAFEYYKKAADQGSIEAQYNLGWMYANGQ 79
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
KD A F +A+++G A + + G V + K AA +
Sbjct: 80 GTTKDYEKAYELFQKAADEGLPAAQYSLAIMYWHGQGVEQDRQKSIEYYEKAAAQGYPEA 139
Query: 233 ESNL 236
E+NL
Sbjct: 140 EANL 143
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDAANMGDPDAQ 125
+N E A E AD + A+Y L ++ + G K A L AA+ G P AQ
Sbjct: 47 QNSEKAFEYYKKAADQGSIEAQYNLGWMYA--NGQGTTKDYEKAYELFQKAADEGLPAAQ 104
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y L Q Q++ Y EKA Q +P A LG Y G+ V KD A+
Sbjct: 105 YSLAIMYWHGQGVEQDRQKSIEYYEKAAAQGYPEAEANLGYFYKNGNEVTKDSFKAVELL 164
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPE 212
+A+ +G A + L G +P+
Sbjct: 165 QKAAAQGVPEAQFNLAMMYLDGEGIPQ 191
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P+A+ LG + N+ + +A ++KA Q P A + L +YL G+ +
Sbjct: 131 AAAQGYPEAEANLGYFYKNGNEVTKDSFKAVELLQKAAAQGVPEAQFNLAMMYLDGEGIP 190
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
+D +A +A+++G A + G L G V + K A
Sbjct: 191 QDYVAAREWLEKAADQGDKSAELNLGVLYGNGQGVTKDYVKAKA 234
>gi|229847119|ref|ZP_04467224.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae 7P49H1]
gi|229809948|gb|EEP45669.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae 7P49H1]
Length = 384
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q + A + LG +Y G VK
Sbjct: 184 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVK 243
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+GHA A G++ G V + + AA++ A+ ++N
Sbjct: 244 QDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQAN 303
Query: 236 L 236
L
Sbjct: 304 L 304
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q + A + LG +Y G VK
Sbjct: 148 AAEQGYADAQFNLGNMYYKGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVK 207
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G+A A G++ G V + + AA++ A + N
Sbjct: 208 QDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYN 267
Query: 236 LMN 238
L N
Sbjct: 268 LGN 270
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q H A Y LG +Y G VK
Sbjct: 220 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 279
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +A+E+G+A A GS G V +
Sbjct: 280 QDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVRQ 316
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ AQ+ LG V+ DY + A + KA +Q + A + LG +Y G
Sbjct: 112 AAEQGNAKAQFNLGLMYDNGRGVKQDYFE----AVKWFRKAAEQGYADAQFNLGNMYYKG 167
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
VK+D A+ + +A+E+G+A A G++ G V + + AA++ A+
Sbjct: 168 HGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYAD 227
Query: 232 LESNLMN 238
+ NL N
Sbjct: 228 AQFNLGN 234
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ LG Q D +A + +A +Q + A + LG +Y G VK
Sbjct: 76 AAEQGVADAQLNLGNMYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVK 135
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ F +A+E+G+A A G++ +G V + + AA++ A+ + N
Sbjct: 136 QDYFEAVKWFRKAAEQGYADAQFNLGNMYYKGHGVKQDDFEAVKWYRKAAEQGYADAQFN 195
Query: 236 LMN 238
L N
Sbjct: 196 LGN 198
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+ Q+ LG + Q D +A + KA +Q A LG +Y G VK+
Sbjct: 41 AEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQGVADAQLNLGNMYAKGLGVKQ 100
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A+ + +A+E+G+A A G + G V + + AA++ A+ + NL
Sbjct: 101 DDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQGYADAQFNL 160
Query: 237 MNPVEKA 243
N K
Sbjct: 161 GNMYYKG 167
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY LG V+ DY + A + KA +Q + A LG+ Y G
Sbjct: 256 AAEQGHAKAQYNLGNMYANGRGVKQDYFE----AVKWYRKAAEQGYADAQANLGSAYSAG 311
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYG--SLLLRGVQVPECLTK 216
V++D A+ F +A+E G A G L+ +G+Q L K
Sbjct: 312 HGVRQDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAK 358
>gi|222054048|ref|YP_002536410.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221563337|gb|ACM19309.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 394
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQY LG + + + ++A + KA DQ H A Y L +Y GD VK
Sbjct: 82 AADQGFVKAQYALGLLYALGEGTLTNRKEAARWYRKAADQGHVTAQYNLAQMYSRGDGVK 141
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A + +A+E+GH A + L +G+ V + + AA++ + +
Sbjct: 142 QDEAEAFKWYRKAAEQGHGTAQLTIAQLYDKGLGVAPDKKEAARWYLKAAEQGKPAAQFA 201
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEE 269
+ EK + +A L+W +R E++
Sbjct: 202 VATMYEKGE-----GVEADKKEALKWFRRAAEQK 230
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD DAQ+ LG + + D ++ D ++A + K+ DQ A + LG +Y G V
Sbjct: 298 AAGQGDSDAQFNLG-HMYDQGDGIKQDWKEAVKWYRKSADQGFDQAQFSLGLMYFHGHGV 356
Query: 175 KKDIASALWCFHRASEKG 192
K++ A+ F +A+E+G
Sbjct: 357 KQNRREAIKWFVKAAEQG 374
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ+ LG ++ ++A + KA Q A + LG +Y GD +K
Sbjct: 262 AAESGVSEAQFNLGILYYYGRGIERNKKEAVKWFRKAAGQGDSDAQFNLGHMYDQGDGIK 321
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +++++G A + G + G V +
Sbjct: 322 QDWKEAVKWYRKSADQGFDQAQFSLGLMYFHGHGVKQ 358
>gi|189502123|ref|YP_001957840.1| hypothetical protein Aasi_0727 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497564|gb|ACE06111.1| hypothetical protein Aasi_0727 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1366
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGA-ALLVDAANMGDPDAQYELGCRLRVE 135
++ ADN + A Y L ++LK + A LL+ A GD +AQ+ LGC
Sbjct: 1137 FSIAADNGHLRATYELGCIYLKGEFDQKVELQKAWKLLLLPAKQGDANAQFLLGCMCTFW 1196
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ + KA +Q H GA + LG Y G V+ + A+ + R++EKGH
Sbjct: 1197 PGLKPKYAEGVRWFTKAAEQGHLGACFSLGYAYQLGQGVELNWLKAISWYLRSAEKGHIE 1256
Query: 196 AAIAYGSLLL 205
+ G++LL
Sbjct: 1257 SQYNLGTILL 1266
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 62 RRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGD 121
+ + L +K +L +A A+Y L + L+ V + G + AA D
Sbjct: 367 KEISSFLYNSKLKTKLVEDAKRGLNEAQYELGAMLLEGIVFEKNEQEGFEWISKAAET-D 425
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
AQ LG V Q+ + + Y+ +KA+ Q P A + LG Y G V ++
Sbjct: 426 ATAQVLLGYCYEVGKGVPQNYKLSKYWYKKALAQDSPDAAFALGKYYWMGISVIRNDKKG 485
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLR-GVQVP 211
L +A+ +GHA AA YG +L + +VP
Sbjct: 486 LQLLEKAANQGHAWAAYNYGDILFQHSTKVP 516
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 116 AANMGDPDAQYELGC-RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ G A YELGC L+ E D Q+A+ + Q A +LLG + +
Sbjct: 1140 AADNGHLRATYELGCIYLKGEFDQKVELQKAWKLLLLPAKQGDANAQFLLGCMCTFWPGL 1199
Query: 175 KKDIASALWCFHRASEKGHAGA--AIAYGSLLLRGVQV 210
K A + F +A+E+GH GA ++ Y L +GV++
Sbjct: 1200 KPKYAEGVRWFTKAAEQGHLGACFSLGYAYQLGQGVEL 1237
>gi|404378894|ref|ZP_10983970.1| hypothetical protein HMPREF9021_01187 [Simonsiella muelleri ATCC
29453]
gi|294483273|gb|EFG30959.1| hypothetical protein HMPREF9021_01187 [Simonsiella muelleri ATCC
29453]
Length = 889
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
KA+ LL AA G+ AQY LG R VQ+ +A + KA +Q +P A LG
Sbjct: 683 KALEYTLL--AAEQGNAIAQYNLGVRYESGQGVVQNYTEAAKWYTKAAEQGNPSAQNNLG 740
Query: 166 TVYLTGDCVKKDI-ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSA 224
+Y G+ V+KD +A WC +A+++GHA A G L + E + A A
Sbjct: 741 LLYADGNGVEKDTDKAADWC-EKAADQGHADAQFNLGLLYAQSTDTEEGQRQAAAWYAKA 799
Query: 225 AKKARANLESNLM----------NPVEKAKEQFEVAAQAG---CNLGLRWL 262
A++ + ++NL EKA + AA+ G GL WL
Sbjct: 800 AEQGHSGAQNNLAIAYFNGWGVEQDHEKAIVWYRAAAEQGVVAAQYGLGWL 850
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A A AA+ GD AQY LG QSD++A Y A +Q + A Y LG
Sbjct: 646 AQAAEWFTKAADQGDAIAQYNLGLAYAYGRGVEQSDKKALEYTLLAAEQGNAIAQYNLGV 705
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
Y +G V ++ A + +A+E+G+ A G L G V + K AA
Sbjct: 706 RYESGQGVVQNYTEAAKWYTKAAEQGNPSAQNNLGLLYADGNGVEKDTDKAADWCEKAAD 765
Query: 227 KARANLESNL 236
+ A+ + NL
Sbjct: 766 QGHADAQFNL 775
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF + +Q H A Y LG +Y G V++D A + +A+++GHA A G
Sbjct: 540 AFNEFKALAEQGHAEAQYYLGILYAQGWGVEQDERQAAVWYLKAADQGHAAAQYNLGMAY 599
Query: 205 LRGVQVPECLTKLNAKRVSAAKKARANLESNL----------MNPVEKAKEQFEVAAQAG 254
+G+ + + + + + AAK ++NL +A E F AA G
Sbjct: 600 AKGLGIMQNMVEASYWYTQAAKLGYVQAQNNLGELYTSGEGVNQDYAQAAEWFTKAADQG 659
Query: 255 -----CNLGLRWL--QRIEEEEKRLL 273
NLGL + + +E+ +K+ L
Sbjct: 660 DAIAQYNLGLAYAYGRGVEQSDKKAL 685
>gi|386266002|ref|YP_005829494.1| Putative TPR repeat protein [Haemophilus influenzae R2846]
gi|309973238|gb|ADO96439.1| Putative TPR repeat protein [Haemophilus influenzae R2846]
Length = 348
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q + A + LG +Y G VK
Sbjct: 148 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVK 207
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+GHA A G++ G V + + AA++ A+ ++N
Sbjct: 208 QDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQAN 267
Query: 236 L 236
L
Sbjct: 268 L 268
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q H A Y LG +Y G VK
Sbjct: 184 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 243
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +A+E+G+A A GS G V +
Sbjct: 244 QDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVRQ 280
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ AQ+ LG V+ DY + A + KA +Q + A + LG +Y G
Sbjct: 112 AAEQGNAKAQFNLGLMYDNGRGVKQDYFE----AVKWFRKAAEQGYADAQFNLGNMYYNG 167
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
VK+D A+ + +A+E+G+A A G++ G V + + AA++ A
Sbjct: 168 HGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAK 227
Query: 232 LESNLMN 238
+ NL N
Sbjct: 228 AQYNLGN 234
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ LG Q D +A + +A +Q + A + LG +Y G VK
Sbjct: 76 AAEQGVADAQLNLGNMYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVK 135
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ F +A+E+G+A A G++ G V + + AA++ A+ + N
Sbjct: 136 QDYFEAVKWFRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFN 195
Query: 236 LMN 238
L N
Sbjct: 196 LGN 198
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY LG V+ DY + A + KA +Q + A LG+ Y G
Sbjct: 220 AAEQGHAKAQYNLGNMYANGRGVKQDYFE----AVKWYRKAAEQGYADAQANLGSAYSAG 275
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYG--SLLLRGVQVPECLTK 216
V++D A+ F +A+E G A G L+ +G+Q L K
Sbjct: 276 HGVRQDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAK 322
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A G+ Q+ LG + Q D +A + KA +Q A LG +Y G
Sbjct: 36 LWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWYRKAAEQGVADAQLNLGNMYAKG 95
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
VK+D A+ + +A+E+G+A A G + G V + + AA++ A+
Sbjct: 96 LGVKQDDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQGYAD 155
Query: 232 LESNLMN 238
+ NL N
Sbjct: 156 AQFNLGN 162
>gi|221068658|ref|ZP_03544763.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713681|gb|EED69049.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 425
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD AQ LG D QA + E++ Y LG + +G VK
Sbjct: 207 AADQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 266
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D +AL F +A+EKGHA A G + G VP+ LT+
Sbjct: 267 EDGRAALQWFEQAAEKGHADAQYNAGMIYAVGALVPQDLTR 307
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A++ A GD AQY LG R R Q QA ++ ++ +Q + A LG +Y
Sbjct: 130 AVMRAEAQTGDAKAQYLLGSRYRFGKGVNQDLAQAVHWYRQSAEQGYAPAQSDLGVLYAN 189
Query: 171 GDCVKKDIASALWCFHRASEKG 192
G V D A A+ + +A+++G
Sbjct: 190 GRGVTLDEAQAVSWYRKAADQG 211
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY G V Q +A ++EK+ Q + A LG +Y G V
Sbjct: 279 AAEKGHADAQYNAGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSSLGFLYANGQGVA 338
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN-----AKRVSAAKKARA 230
+D A F RA+++G+ A ++ G V + + + A+ + ++R
Sbjct: 339 QDAGQAARWFDRAAKQGYTLAQSNLAAMYASGQGVQKDMGRAYFWLTIAQVKDPSLQSRM 398
Query: 231 NLESNLMNPVEKAKEQFEV 249
+ ++P E+ K Q EV
Sbjct: 399 QVAEQALSPSERLKVQREV 417
>gi|304310861|ref|YP_003810459.1| hypothetical protein HDN1F_12230 [gamma proteobacterium HdN1]
gi|301796594|emb|CBL44806.1| Hypothetical protein HDN1F_12230 [gamma proteobacterium HdN1]
Length = 476
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
AN GDP AQY LG + QA Y++E+A + + A Y ++ G +K+
Sbjct: 106 ANTGDPSAQYALGLMFAYGQGVPRDAMQARYWLERAATRGNADAQYQFASLLWQGTWLKR 165
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
D +AL+ + A+++ HA AA L L+G
Sbjct: 166 DSQNALYWYKAAAKQDHADAAFFLAQLYLKG 196
>gi|184157439|ref|YP_001845778.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ACICU]
gi|332874101|ref|ZP_08442035.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|384142513|ref|YP_005525223.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385236836|ref|YP_005798175.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TCDC-AB0715]
gi|387124613|ref|YP_006290495.1| hypothetical protein ABTJ_02605 [Acinetobacter baumannii MDR-TJ]
gi|407932176|ref|YP_006847819.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TYTH-1]
gi|416149191|ref|ZP_11602752.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB210]
gi|417578481|ref|ZP_12229314.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|421629690|ref|ZP_16070412.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|421686544|ref|ZP_16126294.1| Sel1 repeat protein [Acinetobacter baumannii IS-143]
gi|421702959|ref|ZP_16142430.1| hypothetical protein B825_06821 [Acinetobacter baumannii ZWS1122]
gi|421709172|ref|ZP_16148534.1| hypothetical protein B837_18740 [Acinetobacter baumannii ZWS1219]
gi|424053126|ref|ZP_17790658.1| hypothetical protein W9G_01815 [Acinetobacter baumannii Ab11111]
gi|445473168|ref|ZP_21452719.1| Sel1 repeat protein [Acinetobacter baumannii OIFC338]
gi|183209033|gb|ACC56431.1| TPR repeat, SEL1 subfamily protein [Acinetobacter baumannii ACICU]
gi|323517333|gb|ADX91714.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TCDC-AB0715]
gi|332737713|gb|EGJ68606.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|333364607|gb|EGK46621.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB210]
gi|347593006|gb|AEP05727.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385879105|gb|AFI96200.1| TPR repeat-containing protein [Acinetobacter baumannii MDR-TJ]
gi|395567619|gb|EJG28293.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|404568114|gb|EKA73223.1| Sel1 repeat protein [Acinetobacter baumannii IS-143]
gi|404670767|gb|EKB38650.1| hypothetical protein W9G_01815 [Acinetobacter baumannii Ab11111]
gi|407188463|gb|EKE59709.1| hypothetical protein B837_18740 [Acinetobacter baumannii ZWS1219]
gi|407193335|gb|EKE64502.1| hypothetical protein B825_06821 [Acinetobacter baumannii ZWS1122]
gi|407900757|gb|AFU37588.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TYTH-1]
gi|408700358|gb|EKL45817.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|444769455|gb|ELW93640.1| Sel1 repeat protein [Acinetobacter baumannii OIFC338]
Length = 285
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 88 ARYWLSKLHLKYHVP-----GACKAMGAAL----------LVDAANMGDPDAQYELGCRL 132
A+YW K ++ +P G + G + +DAAN GD DAQ LG
Sbjct: 118 AKYWYEKAAVQGDIPSLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMF 177
Query: 133 RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
Q+ ++A + KA Q A Y LG +YL GD +K+D A F A+ +G
Sbjct: 178 LHGRGVTQNKEEASQWYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYPQAQKWFLAAANQG 237
Query: 193 HAGAAIAYGSLLLRGVQVPECLT 215
+ A G + G+ V + L+
Sbjct: 238 ESNAQFHLGKIYKDGLGVDKNLS 260
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AN G +AQY LG L + N++++ D +A Y+ EKA Q +L LG Y G +
Sbjct: 89 SANQGYVNAQYNLGL-LYMGNEHIKPDYAKAKYWYEKAAVQGDIPSLNELGNFYSKGLGI 147
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
K+D A+ + A+ G + A G++ L G V + + + + AA + + +
Sbjct: 148 KQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQWYLKAAIQGDIDAQY 207
Query: 235 NL 236
NL
Sbjct: 208 NL 209
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQY LG + + Q QA + A +Q A + LG +Y G V
Sbjct: 197 AAIQGDIDAQYNLGLMYLLGDGIKQDYPQAQKWFLAAANQGESNAQFHLGKIYKDGLGVD 256
Query: 176 KDIASALWCFHRASEKGHAGAA 197
K+++ A F +++E G++ AA
Sbjct: 257 KNLSLARTWFEKSAEAGNSYAA 278
>gi|148826779|ref|YP_001291532.1| Sel1 domain-containing protein [Haemophilus influenzae PittGG]
gi|148718021|gb|ABQ99148.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae PittGG]
Length = 398
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG + Q D +A + KA +Q H A Y LG +Y G VK
Sbjct: 198 AAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 257
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D + + +A+E+G A A G + +G V + + AA++ A+ + N
Sbjct: 258 QDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVKQDYFEAVKWYRKAAEQGYADAQLN 317
Query: 236 LMNPVEKA 243
L N K
Sbjct: 318 LGNMYAKG 325
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ Q+ LG Q D +A + KA +Q H A Y LG +Y G VK
Sbjct: 126 AAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 185
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G+A A G++ G V + + AA++ A + N
Sbjct: 186 QDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHAKAQYN 245
Query: 236 LMN 238
L N
Sbjct: 246 LGN 248
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q +A + KA +Q + A + LG +Y G VK
Sbjct: 162 AAEQGHAKAQYNLGNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVK 221
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+GHA A G++ G V + + AA++ A + N
Sbjct: 222 QDDVEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFN 281
Query: 236 L 236
L
Sbjct: 282 L 282
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A+L A GD AQ+ LG Q D +A + KA +Q + A + LG +Y
Sbjct: 49 AILQPLAEQGDAIAQFLLGGMYEEGRGVKQDDFEAVKWYRKAAEQGYADAQFNLGVMYER 108
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V++D+ A+ + +A+E+G+A G + +G V + + AA++ A
Sbjct: 109 GRGVRQDVFEAVKWYRKAAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYRKAAEQGHA 168
Query: 231 NLESNLMN 238
+ NL N
Sbjct: 169 KAQYNLGN 176
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG Q +A + KA +Q + + LG +Y G VK
Sbjct: 90 AAEQGYADAQFNLGVMYERGRGVRQDVFEAVKWYRKAAEQGNASVQFNLGLMYSKGQGVK 149
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+GHA A G++ G V + + AA++ A+ + N
Sbjct: 150 QDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFN 209
Query: 236 LMN 238
L N
Sbjct: 210 LGN 212
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY LG V+ DY ++ + + KA +Q A + LG +Y G
Sbjct: 234 AAEQGHAKAQYNLGNMYANGRGVKQDYFETVK----WYRKAAEQGEAKAQFNLGVMYAKG 289
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
VK+D A+ + +A+E+G+A A + G++ +G+ V +
Sbjct: 290 RGVKQDYFEAVKWYRKAAEQGYADAQLNLGNMYAKGLGVKQ 330
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ AQ+ LG V+ DY +A + KA +Q + A LG +Y G
Sbjct: 270 AAEQGEAKAQFNLGVMYAKGRGVKQDYF----EAVKWYRKAAEQGYADAQLNLGNMYAKG 325
Query: 172 DCVKKDIASALWCFHRASEKGHAGAA--IAYGSLLLRGVQVPECLTK 216
VK+D A+ + +A+E+G A A + + LL +GVQ + L K
Sbjct: 326 LGVKQDDVEAVKWYRKAAEQGDADAQALLGFAYLLGKGVQFNKSLAK 372
>gi|395764181|ref|ZP_10444850.1| Sel1 domain-containing protein [Janthinobacterium lividum PAMC
25724]
Length = 519
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG + Q QA ++ +KA +Q + A Y LG +Y G +
Sbjct: 54 AAAQGLEHAQYNLGVMCQKGQGVAQDFVQAAHWYQKAAEQGYAAAQYNLGWLYAKGQGMA 113
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ F RA+E+G AGA G + G VP+ + AA++ A + N
Sbjct: 114 QDSALAMLWFSRAAEQGDAGAQNNLGMMYDNGKGVPQDFVQAINWYRKAAEQGYARAQFN 173
Query: 236 L 236
L
Sbjct: 174 L 174
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG R Q QQA ++ KA +Q + A + L Y GD +
Sbjct: 162 AAEQGYARAQFNLGLRYDNGQGVRQDRQQATAWLRKAAEQGYAPAQFNLALRYENGDVLA 221
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+D A+ + RA+E+GHA + G + G VP
Sbjct: 222 QDSGQAISWYRRAAEQGHASSQFNLGLIYDNGQGVP 257
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQY+LG Q+A ++ KA DQ H A + LG Y G V
Sbjct: 303 AAAQGFPAAQYQLGLLHEHGQGTPVDAQEAIFWYRKAADQGHVRAQFDLGLRYEHGQGVP 362
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSL 203
+D+A AL + RA+E+ +A A G L
Sbjct: 363 QDLALALEWYRRAAEQDYAPAQYMQGVL 390
>gi|262281512|ref|ZP_06059292.1| TPR repeat-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|262257100|gb|EEY75838.1| TPR repeat-containing protein [Acinetobacter calcoaceticus RUH2202]
Length = 273
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 122 PDAQYELGCRLRVENDY-VQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
P+AQY LG L +N Y V D+ +A + + + DQ + A Y L Y++G+ +KKDI
Sbjct: 122 PEAQYNLG--LMYDNGYYVNKDRSKALEFYKLSSDQGYAKAQYNLANAYISGNGIKKDIN 179
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTKLNAKRVSAAKKARANL 232
AL + +A+E+ + A ++ G V E TK+ K V A+ A +
Sbjct: 180 LALELYKKAAEQNLSEAQYNLANIYSDGSLVKQDNEKALELYTKVAEKGVPEAQNNLAYM 239
Query: 233 ESNLMNPVEKAKEQFEVAAQAG 254
+N+ + EKAK F+ AA G
Sbjct: 240 YANVYSDYEKAKFWFQKAADNG 261
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
++D++A+Y+ EKA P A Y LG +Y G V KD + AL + +S++G+A A
Sbjct: 104 KNDEKAYYWYEKAAKNKFPEAQYNLGLMYDNGYYVNKDRSKALEFYKLSSDQGYAKAQYN 163
Query: 200 YGSLLLRGVQVP-------ECLTKLNAKRVSAAKKARANLESN---LMNPVEKAKEQFEV 249
+ + G + E K + +S A+ AN+ S+ + EKA E +
Sbjct: 164 LANAYISGNGIKKDINLALELYKKAAEQNLSEAQYNLANIYSDGSLVKQDNEKALELYTK 223
Query: 250 AAQAGC 255
A+ G
Sbjct: 224 VAEKGV 229
>gi|54294116|ref|YP_126531.1| hypothetical protein lpl1180 [Legionella pneumophila str. Lens]
gi|53753948|emb|CAH15419.1| hypothetical protein lpl1180 [Legionella pneumophila str. Lens]
Length = 490
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
D A GD AQ+ELG + + D V+ D ++A Y+ +KA DQ A LG +YL G+
Sbjct: 38 DKAEQGDAQAQFELGLQYE-KGDGVKKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEG 96
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
V ++ A+ F +ASE+G A G L G+ V + L + AA+ ++ +
Sbjct: 97 VSQNSQQAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQ 156
Query: 234 SNL 236
NL
Sbjct: 157 YNL 159
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 65 IPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLV--DAANMGD 121
+ +++++ F +A+ + A++ +L L+Y G K + A+ AA+ G
Sbjct: 24 VDTYRSSQKQFNTEDKAEQGDAQAQF---ELGLQYEKGDGVKKDLKKAIYWYQKAADQGQ 80
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQ LG Q+ QQA ++ +KA +Q +G +Y G VKKD+ A
Sbjct: 81 AEAQNNLGVLYLKGEGVSQNSQQAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQA 140
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVE 241
+ +A+E G++ + + G +P+ + K + AA++ + ++NL E
Sbjct: 141 FIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYE 200
Query: 242 KAKE 245
+ +E
Sbjct: 201 RGEE 204
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QAF + +KA + + Y L +Y+ G+ + KDI A+ + +A+E+G A G L
Sbjct: 139 QAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVL 198
Query: 204 LLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
RG +VP L + AA + ++NL
Sbjct: 199 YERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 231
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQ LG + +Q ++A Y+ EKA Q A LG +Y G +
Sbjct: 219 AANEGSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGVGTE 278
Query: 176 KDIASALWCFHRASEKG 192
KD+ A++ + +A+E G
Sbjct: 279 KDMKKAIYWYEKAAENG 295
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 103 GACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
G K +G A + AA G+ D QY L N + ++A ++ KA +Q A
Sbjct: 132 GVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDA 191
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG +Y G+ V +D+ +A+ + RA+ +G A G L + G
Sbjct: 192 QNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTG 238
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A+ N+ +Y L+ +++ + G K + A+ + AA GD DAQ LG +
Sbjct: 148 AEGGNSDGQYNLAVMYM--YGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEV 205
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ + A + +A ++ A LG +Y+TGD +D A++ + +A+ +G A
Sbjct: 206 PRDLKAAISWYTRAANEGSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQN 265
Query: 199 AYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL---------MNPVEKAKEQFEV 249
G + +GV + + K AA+ ++NL + +KA F+
Sbjct: 266 NLGYIYEQGVGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKK 325
Query: 250 AAQAGC-----NLGLRWLQ 263
AA G NLGL +++
Sbjct: 326 AADQGFAEAQNNLGLMYMK 344
>gi|375131217|ref|YP_004993317.1| hypothetical protein [Vibrio furnissii NCTC 11218]
gi|315180391|gb|ADT87305.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
Length = 339
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AN GD +AQY+L + ++ S AFY+ ++A + H A+ L Y+ G
Sbjct: 27 LITLANQGDRNAQYQLAVDYQRGHNTPVSQDDAFYWFQQAAEAGHTPAMVQLANAYVAGA 86
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
KDI AL+ ++ G+ AA+ G L Q P
Sbjct: 87 GTDKDIHKALFWLIKSLVDGNQSAAVHIGQLYQSLTQSP 125
>gi|359298722|ref|ZP_09184561.1| Sel1 domain-containing protein [Haemophilus [parainfluenzae] CCUG
13788]
gi|402306033|ref|ZP_10825085.1| Sel1 repeat protein [Haemophilus sputorum HK 2154]
gi|400375448|gb|EJP28347.1| Sel1 repeat protein [Haemophilus sputorum HK 2154]
Length = 321
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G +AQY LG V+ DY+++ + + KA DQ H AL+ LG +Y G
Sbjct: 162 AAEQGHKNAQYNLGVMYYDGRGVKQDYLEAAK----WYRKAADQGHINALFNLGVIYYDG 217
Query: 172 DCVKKD-IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
VK+D + +A W + +A+E+GH A G + +G V + + AA++ A
Sbjct: 218 RGVKQDYLETAKW-YRKAAEQGHRDAQFNLGVMYSKGEGVKQDYFEAAKWYRKAAEQGYA 276
Query: 231 NLESNL 236
+ + NL
Sbjct: 277 SAQYNL 282
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG Q D +A + KA +Q H A Y LG +Y G VK
Sbjct: 126 AAEQGHIDAQFNLGVMYSKGEGVKQDDIEAVKWYRKAAEQGHKNAQYNLGVMYYDGRGVK 185
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A + +A+++GH A G + G V + + AA++ + + N
Sbjct: 186 QDYLEAAKWYRKAADQGHINALFNLGVIYYDGRGVKQDYLETAKWYRKAAEQGHRDAQFN 245
Query: 236 L 236
L
Sbjct: 246 L 246
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 117 ANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
A G AQ+ LG VE DY+++ + + KA +Q H A + LG +Y G+
Sbjct: 55 AEQGYASAQFNLGVIYDHEQGVEQDYIEAAK----WYRKAAEQGHRDAQFYLGVMYSRGE 110
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
VK+D + + +A+E+GH A G + +G V + + AA++ N
Sbjct: 111 GVKQDYLEEIKWYRKAAEQGHIDAQFNLGVMYSKGEGVKQDDIEAVKWYRKAAEQGHKNA 170
Query: 233 ESNL 236
+ NL
Sbjct: 171 QYNL 174
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA+ G +A + LG V+ DY+++ + + KA +Q H A + LG +Y G
Sbjct: 198 AADQGHINALFNLGVIYYDGRGVKQDYLETAK----WYRKAAEQGHRDAQFNLGVMYSKG 253
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ VK+D A + +A+E+G+A A G + G VP+
Sbjct: 254 EGVKQDYFEAAKWYRKAAEQGYASAQYNLGVMYANGYGVPQ 294
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G DAQ+ LG V+ DY++ + + KA +Q H A + LG +Y G
Sbjct: 90 AAEQGHRDAQFYLGVMYSRGEGVKQDYLEEIK----WYRKAAEQGHIDAQFNLGVMYSKG 145
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+ VK+D A+ + +A+E+GH A G + G V + + AA + N
Sbjct: 146 EGVKQDDIEAVKWYRKAAEQGHKNAQYNLGVMYYDGRGVKQDYLEAAKWYRKAADQGHIN 205
Query: 232 LESNL 236
NL
Sbjct: 206 ALFNL 210
>gi|317133394|ref|YP_004092708.1| Sel1 domain-containing protein repeat-containing protein
[Ethanoligenens harbinense YUAN-3]
gi|315471373|gb|ADU27977.1| Sel1 domain protein repeat-containing protein [Ethanoligenens
harbinense YUAN-3]
Length = 1377
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 122 PDA--QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
PDA +Y L L ++ +QA Y++ A D+ HP A Y+LG +YL GD V KD
Sbjct: 1008 PDANLEYRLATMLLTGEGCERNPEQAVAYLKAACDKEHPSAQYMLGKMYLNGDVVAKDEK 1067
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGV 208
A A++ H AA G L G+
Sbjct: 1068 QAFRLIKAAADNDHPHAAYTTGQLYRDGI 1096
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL+ A GD AQY+LG R + AF I+ + D+ +P A Y L +Y G
Sbjct: 427 LLITRAEHGDARAQYDLGMRTLRGRGIEKDPALAFRIIKDSADRGNPAAQYKLAQMYRDG 486
Query: 172 DCVKKDIASALWC----------FHRA-------SEKGHAGAAIAYGSLLLRGVQVPECL 214
V D+A A W FH A +E G+A A ++ +G VP+
Sbjct: 487 IGVPADVAGASWTDKNSFHADEYFHEAFQGFLEKAEAGNAYANYRVATMYEKGDGVPQDA 546
Query: 215 TK 216
K
Sbjct: 547 QK 548
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
D + +Y LG L + + + Y++ A + H A Y LG +YLTG+ + KD+
Sbjct: 1125 DENLEYRLGMMLLAGEGCPKDVKASVVYLDTAAGKGHEYAQYALGRLYLTGEDLPKDVDK 1184
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+ ++ KG+ A A G L L G +P+ + K
Sbjct: 1185 AVGYLDASAAKGNQYAQYALGRLYLTGEDLPKDVDK 1220
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 122 PDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
P AQY LG ++ + D V D+ QAF I+ A D HP A Y G +Y G +KD +
Sbjct: 1046 PSAQYMLG-KMYLNGDVVAKDEKQAFRLIKAAADNDHPHAAYTTGQLYRDGIGTQKDEQA 1104
Query: 181 ALWCFHRASE 190
A F +A E
Sbjct: 1105 AQRYFQKAFE 1114
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G AQY LG D + +A Y++ + + + A Y LG +YLTG+
Sbjct: 1153 LDTAAGKGHEYAQYALGRLYLTGEDLPKDVDKAVGYLDASAAKGNQYAQYALGRLYLTGE 1212
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ KD+ A ++ +G+ A A G L L G +VP+ + K
Sbjct: 1213 DLPKDVDKAADYLDASAAQGNQFAQYALGRLYLDGKEVPKDVQK 1256
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
QY +G R +D A EK+ DQ +P A Y LG +Y G V++D A
Sbjct: 747 QYRIGKMYRFGQGTEPNDVIAAELFEKSADQGNPFAQYSLGGMYYRGQGVEQDFVKAFEL 806
Query: 185 FHRASEKGHAGAAIAYGSLLLRGV 208
+ +++K ++ AA G + G+
Sbjct: 807 YCASAKKDNSFAAYELGKMYHDGI 830
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR--- 133
LA+E + + +Y + K++ + A L +A+ G+P AQY LG
Sbjct: 735 LAVEEIGHDAYIQYRIGKMYRFGQGTEPNDVIAAELFEKSADQGNPFAQYSLGGMYYRGQ 794
Query: 134 -VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRAS--- 189
VE D+V +AF + + + A Y LG +Y G D A + CF +A
Sbjct: 795 GVEQDFV----KAFELYCASAKKDNSFAAYELGKMYHDGIGTAPDAAESERCFEQAFAGF 850
Query: 190 ---EKGHAGAAIAY--GSLLLRGVQVPECL 214
EK + I Y G +L G P+ L
Sbjct: 851 VAIEKANPDDKIQYRLGKMLETGTGTPKDL 880
>gi|329123580|ref|ZP_08252142.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
gi|327470322|gb|EGF15782.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
Length = 219
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG + + Q +A + KA +Q H A + LG +Y G VK
Sbjct: 91 AAEQGYASAQFYLGMKYENGSGVKQDVFEAVKWYRKAAEQGHAKAQFDLGVMYDNGQSVK 150
Query: 176 KDIASALWCFHRASEKGHAGAA--IAYGSLLLRGVQVPECLTK 216
+D A+ F +A+E+G+A A + + LL +GVQV + L K
Sbjct: 151 QDDVEAVKWFRKAAEQGNANAQAILGFSYLLGKGVQVNKSLAK 193
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A GD AQY LG Q D +A + KA +Q + A + LG Y G
Sbjct: 51 LWLPLAEQGDAKAQYNLGVMYGNGRGVKQDDFEAVKWYRKAAEQGYASAQFYLGMKYENG 110
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
VK+D+ A+ + +A+E+GHA A G + G V + + AA++ AN
Sbjct: 111 SGVKQDVFEAVKWYRKAAEQGHAKAQFDLGVMYDNGQSVKQDDVEAVKWFRKAAEQGNAN 170
Query: 232 LESNL 236
++ L
Sbjct: 171 AQAIL 175
>gi|52841406|ref|YP_095205.1| hypothetical protein lpg1172 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777082|ref|YP_005185519.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|52628517|gb|AAU27258.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364507896|gb|AEW51420.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 495
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
D A GD AQ+ELG + + D V D ++A Y+ +KA DQ A LG +YL G+
Sbjct: 42 DKAEQGDAQAQFELGLKYE-KGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEG 100
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
V ++ A++ F +ASE+G A G L G+ V
Sbjct: 101 VPQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGV 137
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 65 IPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLV--DAANMGD 121
+ +++++ F +A+ + A++ +L LKY G K + A+ AA+ G
Sbjct: 28 VDTYRSSQKQFNTEDKAEQGDAQAQF---ELGLKYEKGDGVNKDLKKAIYWYQKAADQGQ 84
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQ LG Q+ QQA Y+ +KA +Q +G +Y G VKKD A
Sbjct: 85 AEAQNNLGVLYLKGEGVPQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDPGQA 144
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVE 241
+ +A+E G++ + + G +P+ + K + AA++ + ++NL E
Sbjct: 145 FIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYE 204
Query: 242 KAKE 245
+ +E
Sbjct: 205 RGEE 208
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QAF + +KA + + Y L +Y+ G+ + KDI A+ + +A+E+G A G L
Sbjct: 143 QAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVL 202
Query: 204 LLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
RG +VP L + AA + ++NL
Sbjct: 203 YERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 235
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQ LG + +Q ++A Y+ EKA Q A LG +Y G +
Sbjct: 223 AANEGSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTE 282
Query: 176 KDIASALWCFHRASEKG 192
KD+ A++ + +A+E G
Sbjct: 283 KDMKKAIYWYEKAAENG 299
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ D QY L N + ++A ++ KA +Q A LG +Y G+ V
Sbjct: 151 AAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVP 210
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D+ +A+ + RA+ +G A G L + G
Sbjct: 211 RDLKAAISWYTRAANEGSLIAQTNLGVLYMTG 242
>gi|261364815|ref|ZP_05977698.1| Sel1 repeat protein [Neisseria mucosa ATCC 25996]
gi|288566849|gb|EFC88409.1| Sel1 repeat protein [Neisseria mucosa ATCC 25996]
Length = 263
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG Q D QA + KA +Q + A + LG +Y G+ V+
Sbjct: 71 AAAQGFAEAQYNLGVAYERGRGVRQDDAQAVQWYRKAAEQGYATAQFNLGWMYYKGEGVR 130
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+G A A G + RG V + + AA++ A + N
Sbjct: 131 QDYAQAVQWYRKAAEQGVAEAQSNLGVMYERGRGVRQDDEQAVQWYRKAAEQGHAQAQDN 190
Query: 236 LMNPVEKA 243
L E+
Sbjct: 191 LGEAYEEG 198
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 43/92 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ LG Q D+QA + KA +Q H A LG Y G V
Sbjct: 143 AAEQGVAEAQSNLGVMYERGRGVRQDDEQAVQWYRKAAEQGHAQAQDNLGEAYEEGLGVH 202
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A A+ + +A+E+G A A G + RG
Sbjct: 203 QDDAQAVQWYRKAAEQGLANAQYNLGVMYERG 234
>gi|373120788|ref|ZP_09534828.1| hypothetical protein HMPREF0995_05664 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371655900|gb|EHO21237.1| hypothetical protein HMPREF0995_05664 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 685
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 84 SNTHARYWLSKLHLKYHVPGA-CKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQ 140
SN +ARY L+K+ L P A + AL L +AA G AQYELG R +
Sbjct: 426 SNPYARYQLAKIILA--DPAAEPEQFRTALEWLTEAAEAGQVHAQYELGKIYRDGRSVEK 483
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLT-GDCVKKDIASALWCFHRASEKGHAGAAIA 199
A ++ +A +Q A Y LG + LT G+ + KD+++ + R++E G+ A
Sbjct: 484 DALLAAAWLTRAAEQDSDAAAYALGVLLLTGGEGLAKDVSATVSWLRRSAEGGNQYAQYR 543
Query: 200 YGSLLLRGVQVP 211
G LLL+G +VP
Sbjct: 544 LGRLLLQGEEVP 555
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
E F ALE A+ HA+Y L K++ + AA L AA A Y
Sbjct: 447 EQFRTALEWLTEAAEAGQVHAQYELGKIYRDGRSVEKDALLAAAWLTRAAEQDSDAAAYA 506
Query: 128 LGCRLRVENDYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
LG L + + D A ++ ++ + + A Y LG + L G+ V ++I A+
Sbjct: 507 LGVLLLTGGEGLAKDVSATVSWLRRSAEGGNQYAQYRLGRLLLQGEEVPREIEEAVRWLT 566
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVP 211
++E+G+ A A G L L G +VP
Sbjct: 567 VSAEQGNQYAQYALGKLYLIGKEVP 591
>gi|307609926|emb|CBW99453.1| hypothetical protein LPW_12271 [Legionella pneumophila 130b]
Length = 489
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
D A GD AQ+ELG + + D V D ++A Y+ +KA DQ A LG +YL G+
Sbjct: 37 DKAEQGDAQAQFELGLKYE-KGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEG 95
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
V ++ A+ F +ASE+G A G L G+ V + L + AA+ ++ +
Sbjct: 96 VPQNSQQAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQ 155
Query: 234 SNL 236
NL
Sbjct: 156 YNL 158
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 65 IPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLV--DAANMGD 121
+ +++++ F +A+ + A++ +L LKY G K + A+ AA+ G
Sbjct: 23 VDTYRSSQKQFNTEDKAEQGDAQAQF---ELGLKYEKGDGVNKDLKKAIYWYQKAADQGQ 79
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQ LG Q+ QQA ++ +KA +Q +G +Y G VKKD+ A
Sbjct: 80 AEAQNNLGVLYLKGEGVPQNSQQAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQA 139
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVE 241
+ +A+E G++ + + G +P+ + K + AA++ + ++NL E
Sbjct: 140 FIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYE 199
Query: 242 KAKE 245
+ +E
Sbjct: 200 RGEE 203
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QAF + +KA + + Y L +Y+ G+ + KDI A+ + +A+E+G A G L
Sbjct: 138 QAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVL 197
Query: 204 LLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
RG +VP L + AA + ++NL
Sbjct: 198 YERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 230
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQ LG + +Q ++A Y+ EKA Q A LG +Y G +
Sbjct: 218 AANEGSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTE 277
Query: 176 KDIASALWCFHRASEKG 192
KD+ A++ + +A+E G
Sbjct: 278 KDMKKAIYWYEKAAENG 294
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 103 GACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
G K +G A + AA G+ D QY L N + ++A ++ KA +Q A
Sbjct: 131 GVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDA 190
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG +Y G+ V +D+ +A+ + RA+ +G A G L + G
Sbjct: 191 QNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTG 237
>gi|52842845|ref|YP_096644.1| enhanced entry protein EnhC [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778534|ref|YP_005186973.1| enhanced entry protein EnhC [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52629956|gb|AAU28697.1| enhanced entry protein EnhC [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364509350|gb|AEW52874.1| enhanced entry protein EnhC [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 1200
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L + +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AKYFLESKHAGNKKLGIIWLNKAAENGDPKALTELGRFYVAGQM 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN--AKRVSAAKKARAN 231
V KD A + ++A+ + +A A + G L L Q E + LN AK+ + A A+
Sbjct: 204 VTKDTAKGVELLNKAASEQYAPAMLELGKLALMQNQYDEAIQWLNKAAKQSTEATLELAH 263
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCN 256
+ +PV K F +A N
Sbjct: 264 IYLQDKSPVYDPKTGFLFVLKAAQN 288
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 495 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 554
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 555 QQALNWLTDSAFKGNKRAQYVLARILRQGIVGPD 588
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 956 SLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1015
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1016 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1055
>gi|93007054|ref|YP_581491.1| hypothetical protein Pcryo_2230 [Psychrobacter cryohalolentis K5]
gi|92394732|gb|ABE76007.1| Sel1 [Psychrobacter cryohalolentis K5]
Length = 264
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 112 LLVDAANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
+ +AN G P AQ +G + V+ DY + AF +I+KA +Q +P A Y L +
Sbjct: 98 FYLQSANQGYPSAQNMVGLSYKEGRGVQQDYTK----AFEWIQKAANQGYPSAQYELSLM 153
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKK 227
Y G VK+D A A + +++ +G+A A G++ +G+ V + K +A +
Sbjct: 154 YEKGIGVKQDNAKAFEWYLKSANQGNAQAQSNLGAMYDQGIGVQQDYAKAFEWYTRSASQ 213
Query: 228 ARANLESNL 236
A + NL
Sbjct: 214 GDARAQFNL 222
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G P AQYEL Q + +AF + K+ +Q + A LG +Y G V+
Sbjct: 138 AANQGYPSAQYELSLMYEKGIGVKQDNAKAFEWYLKSANQGNAQAQSNLGAMYDQGIGVQ 197
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSL--LLRGVQ 209
+D A A + R++ +G A A G + +GVQ
Sbjct: 198 QDYAKAFEWYTRSASQGDARAQFNLGRMYHFGKGVQ 233
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+ +A + +G +ND +AF + ++ +Q +P A ++G Y G V++
Sbjct: 72 ARQGNAEALFVMGMMHTQKND-----TKAFEFYLQSANQGYPSAQNMVGLSYKEGRGVQQ 126
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A +A+ +G+ A + +G+ V + K + +A + A +SNL
Sbjct: 127 DYTKAFEWIQKAANQGYPSAQYELSLMYEKGIGVKQDNAKAFEWYLKSANQGNAQAQSNL 186
>gi|334343014|ref|YP_004555618.1| Sel1 domain-containing protein repeat-containing protein
[Sphingobium chlorophenolicum L-1]
gi|334103689|gb|AEG51112.1| Sel1 domain protein repeat-containing protein [Sphingobium
chlorophenolicum L-1]
Length = 261
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELG-CRLR---VEN 136
AD+ + A+ L +++L+ G AA +G DAQY LG LR V+
Sbjct: 69 ADDGDPRAQNSLGRMYLRGQGTGRDYKAAMKWFRRAAALGVADAQYNLGEIYLREFGVDQ 128
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
D V++ + + +A +Q H GA + L +Y+ G V + A++ F RA+ +G A A
Sbjct: 129 DLVEAAR----WYTRAAEQGHVGAQFTLAVLYMIGQGVSRSPLKAVYWFERAASQGSAEA 184
Query: 197 AIAYGSLLLRGVQVPE---------CLTKLNAKRVSAAKKARANLE--SNLMNPVEKAKE 245
+ G + G V L + NA+ KA N+ S M P + A+
Sbjct: 185 QVQLGIIYGAGQGVARDSVVAYKWFALGQANAREPKLRAKASQNIGRLSRSMTPAQIAEA 244
Query: 246 QFEV 249
Q +V
Sbjct: 245 QRQV 248
>gi|410657886|ref|YP_006910257.1| hypothetical protein DHBDCA_p1243 [Dehalobacter sp. DCA]
gi|410660929|ref|YP_006913300.1| hypothetical protein DCF50_p1309 [Dehalobacter sp. CF]
gi|409020241|gb|AFV02272.1| hypothetical protein DHBDCA_p1243 [Dehalobacter sp. DCA]
gi|409023285|gb|AFV05315.1| hypothetical protein DCF50_p1309 [Dehalobacter sp. CF]
Length = 892
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 84 SNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD- 142
N HA+Y L K++L L AA+ G+ AQ+ LG +L + YV+ D
Sbjct: 670 GNVHAQYMLGKVYLDEDGGHRNPEKAVLWLTKAADNGNGLAQFALG-KLYSDGLYVEKDI 728
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
+A KA +Q + A Y LG +YL G+ + KD+ +A+ ++E G+ + A G
Sbjct: 729 AKAVELFTKAAEQNNSFAQYQLGKLYLLGEDMPKDVEAAVRWLTMSAELGNQYSQYALGK 788
Query: 203 LLLRGVQVP 211
L L G VP
Sbjct: 789 LYLMGRDVP 797
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
D QY LG L + + A Y EKA + A Y+LG VYL D ++
Sbjct: 635 DDKLQYRLGQMLFTGTGTDKDVEAAIAYFEKAARLGNVHAQYMLGKVYLDEDGGHRNPEK 694
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+ +A++ G+ A A G L G+ V + + K
Sbjct: 695 AVLWLTKAADNGNGLAQFALGKLYSDGLYVEKDIAK 730
>gi|406880646|gb|EKD28944.1| hypothetical protein ACD_79C00146G0001, partial [uncultured
bacterium]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G P Y LG + + V+ +AF Y+ K+ +Q P A Y LG +Y G+ V+
Sbjct: 346 AVENGIPGDNYYLGRKYYEGDKIVKDYSKAFKYLSKSSEQGWPFAQYYLGLMYYNGEGVE 405
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD+ A++ F +A E+G++ + G++ +G V
Sbjct: 406 KDLKQAVYWFTKAGEQGNSDSQNKLGTIYGQGEGV 440
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 90 YWLSK-----LHLKYHVPGACKAMGAALLVD----------AANMGDPDAQYELGCRLRV 134
+WLSK L +Y + G + L D AA GD +++++LG
Sbjct: 269 FWLSKWAGSDLSCQYFIGGLYEDGTEDLTQDYKRAAYWYTKAAEKGDANSRFKLGDLYYE 328
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
+Q +Q+ Y+ EKAV+ PG Y LG Y GD + KD + A ++SE+G
Sbjct: 329 GKGVLQDYKQSEYWYEKAVENGIPGDNYYLGRKYYEGDKIVKDYSKAFKYLSKSSEQGWP 388
Query: 195 GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
A G + G V + L + A ++ ++ ++ L
Sbjct: 389 FAQYYLGLMYYNGEGVEKDLKQAVYWFTKAGEQGNSDSQNKL 430
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 125 QYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
QY LG L + V+ D +QA Y+ +K+ D L A Y+L +Y G+ V+KD A+
Sbjct: 462 QYNLGF-LYLNGQGVEKDLKQAVYWFKKSADNLCVNAQYILSKMYYNGEGVEKDYKEAIK 520
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+A+E+G A G + G EC+ K
Sbjct: 521 WITKAAEQGDGVAEYNLGWMYFNG----ECIEK 549
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 6/151 (3%)
Query: 57 CELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDA 116
EL + +P A E ++ A E +S + + ++LK + + A
Sbjct: 112 IELANTYFMP----AFEKYKKAAEKGDSEAQKK--VGLMYLKGYGVSTDLTQAFQWYLKA 165
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+ +AQ +G R Q +A + KA +Q + A LG++Y G+ VKK
Sbjct: 166 AEQGNLEAQVNIGGAYRTGYGVNQDYNKALEWFTKATEQGNADAQRNLGSMYYKGEGVKK 225
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
D A +A E+G AA G++ +G
Sbjct: 226 DTKKAFEWLTKAVEQGDINAAFDLGAIYQKG 256
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKA-------VDQLHPGALYLLG 165
L ++A GDP A Y++ V + ++ ++ Y E+A D+ P A Y LG
Sbjct: 40 LKESAEQGDPYALYQIAWMYYVGDGVTRNQKEVENYAERANKILKPLADKGDPEAQYNLG 99
Query: 166 TVYLTGDCVKKDIA-------SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN 218
+Y G VK+DI A + +A+EKG + A G + L+G V LT+
Sbjct: 100 EMYKYGIGVKQDIELANTYFMPAFEKYKKAAEKGDSEAQKKVGLMYLKGYGVSTDLTQAF 159
Query: 219 AKRVSAAKKARANLESNL 236
+ AA+ + NLE+ +
Sbjct: 160 QWYLKAAE--QGNLEAQV 175
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
VE DY ++A +I KA +Q A Y LG +Y G+C++KD A F +AS+ G
Sbjct: 511 VEKDY----KEAIKWITKAAEQGDGVAEYNLGWMYFNGECIEKDYKQAYKWFKQASKSGI 566
Query: 194 AGAAIAYGSLLLRGVQVPE 212
A A G + G V +
Sbjct: 567 ADAQYNLGLMYYNGEGVTQ 585
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 112 LLVDAANMGDPDAQYELG----------CRLRVENDYVQSDQQAFYYIEKAVDQLHPGAL 161
+L A+ GDP+AQY LG + + N Y AF +KA ++ A
Sbjct: 82 ILKPLADKGDPEAQYNLGEMYKYGIGVKQDIELANTYFMP---AFEKYKKAAEKGDSEAQ 138
Query: 162 YLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKR 221
+G +YL G V D+ A + +A+E+G+ A + G G V + K
Sbjct: 139 KKVGLMYLKGYGVSTDLTQAFQWYLKAAEQGNLEAQVNIGGAYRTGYGVNQDYNKALEWF 198
Query: 222 VSAAKKARANLESNL 236
A ++ A+ + NL
Sbjct: 199 TKATEQGNADAQRNL 213
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L ++ G P AQY LG + + V+ D +QA Y+ KA +Q + + LGT+Y G
Sbjct: 379 LSKSSEQGWPFAQYYLGL-MYYNGEGVEKDLKQAVYWFTKAGEQGNSDSQNKLGTIYGQG 437
Query: 172 DCVKKDIASALWCFHRASE 190
+ V+KD A + +A+E
Sbjct: 438 EGVEKDYKLAFNWYTKAAE 456
>gi|264677145|ref|YP_003277051.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262207657|gb|ACY31755.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 430
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG D QA + E++ Y LG + +G VK
Sbjct: 212 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 271
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D +AL F +A+EKGHA A G + G VP+ LT+
Sbjct: 272 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTR 312
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A + AA GD AQY LG R R Q QA ++ ++ DQ + A LG +Y
Sbjct: 135 AAMRAAAQTGDAKAQYLLGSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYAN 194
Query: 171 GDCVKKDIASALWCFHRASEKG 192
G V D A+ + +A+E+G
Sbjct: 195 GRGVTLDEVQAVNWYRKAAEQG 216
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY G V Q +A ++EK+ Q + A LG +Y G V
Sbjct: 284 AAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSSLGFLYANGQGVS 343
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK-------LNAKRVSAAKKA 228
+D A F RA+++G+ A ++ + G V + + K +AK S ++
Sbjct: 344 QDAGQAARWFDRAAKQGYTLAQSNLAAMYVSGQGVQKDMGKAYFWLAIAHAKDPSL--QS 401
Query: 229 RANLESNLMNPVEKAKEQFEV 249
R + P E+ K Q EV
Sbjct: 402 RMQTAEQALGPAERLKVQREV 422
>gi|221067763|ref|ZP_03543868.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220712786|gb|EED68154.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 445
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-D 172
V+AA GD AQYELG ++ A ++ A DQ H + YLLG VY+ G +
Sbjct: 29 VNAAKTGDVAAQYELGKAYLYGKGVEKNADDALRWLRLAADQQHAPSQYLLGLVYVLGAE 88
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
VKKD + L H+A+ G+ A G++ LRG V A AA++ A
Sbjct: 89 GVKKDPEAGLARIHQAANAGNLDAQNLLGTIYLRGEAVERNAATGVAWLERAAQQGSATA 148
Query: 233 ESNL 236
+++L
Sbjct: 149 QNSL 152
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG + +S QA + A +Q A Y LGT+Y G VK
Sbjct: 358 AAEQGYAKAQYNLGTLYENGDGVDRSLAQALKWYRLAAEQQDAPAQYALGTLYRDGQGVK 417
Query: 176 KDIASALWCFHRASEKGHAGA 196
K+ A RA+ +GHA A
Sbjct: 418 KNARLAREWLQRAAAQGHAPA 438
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+++A G+ AQY +G + + + + +A + A +Q + A Y LGT+Y GD
Sbjct: 319 LNSALRGNVLAQYNVGVFQYLGKGFDKPNYAEAAKWFAMAAEQGYAKAQYNLGTLYENGD 378
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTKLNAKRVSAA 225
V + +A AL + A+E+ A A A G+L G V E L + A+ + A
Sbjct: 379 GVDRSLAQALKWYRLAAEQQDAPAQYALGTLYRDGQGVKKNARLAREWLQRAAAQGHAPA 438
Query: 226 KKARANL 232
KKA A L
Sbjct: 439 KKALAQL 445
>gi|254000442|ref|YP_003052505.1| Sel1 domain-containing protein repeat-containing protein
[Methylovorus glucosetrophus SIP3-4]
gi|253987121|gb|ACT51978.1| Sel1 domain protein repeat-containing protein [Methylovorus
glucosetrophus SIP3-4]
Length = 255
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 116 AANMGDPDAQYELGC-RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY LG R + +A + KA +Q H + LG VYL GD V
Sbjct: 95 SAEQGFAEAQYALGVIYFRRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVV 154
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+DI AL F A+E+G + A G++ L G VP +
Sbjct: 155 PQDIPQALKWFGLAAEQGDSDAQFNLGNMYLEGEGVPASMV 195
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLG 165
A AA+ + A GD AQY LG + D VQ + Q+A + + +Q A Y LG
Sbjct: 50 AQAAAMYRELAAAGDAKAQYNLGL-MYARGDGVQENPQEAVKWYRMSAEQGFAEAQYALG 108
Query: 166 TVYLTGD-CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSA 224
+Y D V D A+ + +A+E+GH + + G + LRG VP+ + + A
Sbjct: 109 VIYFRRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLA 168
Query: 225 AKKARANLESNLMN 238
A++ ++ + NL N
Sbjct: 169 AEQGDSDAQFNLGN 182
>gi|299530688|ref|ZP_07044103.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298721204|gb|EFI62146.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 427
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG D QA + E++ Y LG + +G VK
Sbjct: 209 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 268
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D +AL F +A+EKGHA A G + G VP+ LT+
Sbjct: 269 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTR 309
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G+ QY LG L + + A + E+A ++ H A Y G +Y G V
Sbjct: 245 SAKSGEAAGQYSLGVMLSSGRGVKEDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVP 304
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D+ A +++ +G+A A + G L G VP+ + AAK+ +SN
Sbjct: 305 QDLTRAARWLEKSAGQGNAAAQSSLGFLYANGQGVPQDAGQAARWFDRAAKQGYTLAQSN 364
Query: 236 L 236
L
Sbjct: 365 L 365
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY G V Q +A ++EK+ Q + A LG +Y G V
Sbjct: 281 AAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSSLGFLYANGQGVP 340
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN-----AKRVSAAKKARA 230
+D A F RA+++G+ A ++ + G V + + K A + ++R
Sbjct: 341 QDAGQAARWFDRAAKQGYTLAQSNLAAMYVSGQGVQKDMGKAYFWLAIAHAKDPSLQSRM 400
Query: 231 NLESNLMNPVEKAKEQFEV 249
++P E+ K Q EV
Sbjct: 401 QTAEQTLSPAERLKVQREV 419
>gi|408906850|emb|CCM11975.1| hypothetical protein [Helicobacter heilmannii ASB1.4]
Length = 328
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 132 LRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
+ + D V+ D Q Y +KA+ P AL++LGT+YL G+ VK+D+ SA F +A
Sbjct: 220 MYFQGDGVKKDPFQGKLYAKKAIGLGDPKALWMLGTMYLNGNGVKQDLKSAQNYFEKAGA 279
Query: 191 KGHAGAAIAYGSLLLRGVQVPECLTK 216
KG A A G + L G V + TK
Sbjct: 280 KGFAKGYYALGVMYLNGNGVKKDTTK 305
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A +GDP A + LG N Q + A Y EKA + Y LG +YL G+ VK
Sbjct: 241 AIGLGDPKALWMLGTMYLNGNGVKQDLKSAQNYFEKAGAKGFAKGYYALGVMYLNGNGVK 300
Query: 176 KDIASALWCFHRASEKG 192
KD A F ++++ G
Sbjct: 301 KDTTKAKEYFEKSAQMG 317
>gi|238022527|ref|ZP_04602953.1| hypothetical protein GCWU000324_02435 [Kingella oralis ATCC 51147]
gi|237867141|gb|EEP68183.1| hypothetical protein GCWU000324_02435 [Kingella oralis ATCC 51147]
Length = 363
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD +AQ+ LG Q QQA + +KA +Q A + LG +Y G V
Sbjct: 82 AANQGDAEAQFNLGVMYEKGQGVAQDYQQAIAWYQKAANQGVAEAQFNLGGMYYNGQGVA 141
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D AL + +A+ + +A A G + +G V + + A AA + A + N
Sbjct: 142 QDYQQALVWYQKAANQEYAAAQFNLGVMYSKGQGVAQSYQRALAWYQKAAHQGLAAAQYN 201
Query: 236 LMNPVEKAK 244
L E +
Sbjct: 202 LSRMYEDGR 210
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G DAQ+ LG Q QQA + +KA +Q A Y LG +Y G V
Sbjct: 226 AANQGYSDAQFNLGVMYDEGRGVAQDYQQALAWYQKAANQGDAMAQYNLGVMYYEGRGVA 285
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
++ AL + +A+ +G AGA G + G V + + A
Sbjct: 286 QNYQQALSWYQKAANQGVAGAQYNLGLIYATGQGVAQDFQQAKA 329
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD +AQ+ LG Q QQA + +KA +Q A + LG +Y G V +
Sbjct: 47 AQQGDAEAQFNLGVMYEKGQGVAQDYQQAIAWYQKAANQGDAEAQFNLGVMYEKGQGVAQ 106
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D A+ + +A+ +G A A G + G V +
Sbjct: 107 DYQQAIAWYQKAANQGVAEAQFNLGGMYYNGQGVAQ 142
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G +AQ+ LG Q QQA + +KA +Q + A + LG +Y G V
Sbjct: 118 AANQGVAEAQFNLGGMYYNGQGVAQDYQQALVWYQKAANQEYAAAQFNLGVMYSKGQGVA 177
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ AL + +A+ +G A A + G V + + A AA + ++ + N
Sbjct: 178 QSYQRALAWYQKAAHQGLAAAQYNLSRMYEDGRGVAQDYQQALAWYQKAANQGYSDAQFN 237
Query: 236 L 236
L
Sbjct: 238 L 238
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ G AQY L R+ + V D QQA + +KA +Q + A + LG +Y G V
Sbjct: 190 AAHQGLAAAQYNL-SRMYEDGRGVAQDYQQALAWYQKAANQGYSDAQFNLGVMYDEGRGV 248
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
+D AL + +A+ +G A A G + G V + + + AA + A +
Sbjct: 249 AQDYQQALAWYQKAANQGDAMAQYNLGVMYYEGRGVAQNYQQALSWYQKAANQGVAGAQY 308
Query: 235 NL 236
NL
Sbjct: 309 NL 310
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN AQ+ LG QS Q+A + +KA Q A Y L +Y G V
Sbjct: 154 AANQEYAAAQFNLGVMYSKGQGVAQSYQRALAWYQKAAHQGLAAAQYNLSRMYEDGRGVA 213
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D AL + +A+ +G++ A G + G V + + A AA + A + N
Sbjct: 214 QDYQQALAWYQKAANQGYSDAQFNLGVMYDEGRGVAQDYQQALAWYQKAANQGDAMAQYN 273
Query: 236 L 236
L
Sbjct: 274 L 274
>gi|397676942|ref|YP_006518480.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397631|gb|AFN56958.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 373
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 52/114 (45%)
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
+AQ LG R Q DQ+A Y +KA DQ AL LG Y+TG V ++ L
Sbjct: 101 EAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFYMTGRGVPQNYERGL 160
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
CF +A++K + A G+ G VP+ K AA K A E NL
Sbjct: 161 DCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNL 214
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 116 AANMGDPDAQY-------ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
AA+ GD +A+Y LG R Q D +A ++ +KA DQ H A +G Y
Sbjct: 202 AADKGDAEAEYNLGLAYRNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLNMGFAY 261
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGA----AIAY 200
V +D A ++ + +A+E+G + A AIAY
Sbjct: 262 YQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAY 297
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 77/205 (37%), Gaps = 66/205 (32%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQ------LHPG---------- 159
AA G +A+Y L QS ++AF++++KA DQ H G
Sbjct: 21 AAEQGIDEAEYNLALAYEQGKGVEQSYERAFFWLKKAADQNFFKAETHLGLAYQAGIMLP 80
Query: 160 -------ALYL--------------LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
AL++ LG Y G VK+D A+ + +A+++G A
Sbjct: 81 RDDKKAVALFMKADRQAYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALT 140
Query: 199 AYGSLLLRGVQVP-------ECLTKLNAKRVSAAKKARANLESNLMNPV----------E 241
A G + G VP +C K K VSAA E NL N E
Sbjct: 141 ALGVFYMTGRGVPQNYERGLDCFRKAADKDVSAA-------EDNLGNAYRHGYGVPKDDE 193
Query: 242 KAKEQFEVAAQAG-----CNLGLRW 261
KA ++ AA G NLGL +
Sbjct: 194 KAVYWYQKAADKGDAEAEYNLGLAY 218
>gi|418530603|ref|ZP_13096526.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371452322|gb|EHN65351.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 416
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG D QA + E++ Y LG + +G VK
Sbjct: 198 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 257
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D +AL F +A+EKGHA A G + G VP+ LT+
Sbjct: 258 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTR 298
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G+ QY LG L + + A + E+A ++ H A Y G +Y G V
Sbjct: 234 SAKSGEAAGQYSLGVMLSSGRGVKEDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVP 293
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D+ A +++ +G+A A + G L G VP+ + AAK+ +SN
Sbjct: 294 QDLTRAARWLEKSAGQGNAAAQSSLGFLYANGQGVPQDAGQAARWFDRAAKQGYTLAQSN 353
Query: 236 L 236
L
Sbjct: 354 L 354
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY G V Q +A ++EK+ Q + A LG +Y G V
Sbjct: 270 AAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSSLGFLYANGQGVP 329
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN-----AKRVSAAKKARA 230
+D A F RA+++G+ A ++ + G V + + K A + ++R
Sbjct: 330 QDAGQAARWFDRAAKQGYTLAQSNLAAMYVSGQGVQKDMGKAYFWLAIAHAKDPSLQSRM 389
Query: 231 NLESNLMNPVEKAKEQFEV 249
++P E+ K Q EV
Sbjct: 390 QTAEQALSPAERLKVQREV 408
>gi|294661318|ref|YP_003573194.1| hypothetical protein Aasi_1811 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336469|gb|ACP21066.1| hypothetical protein Aasi_1811 [Candidatus Amoebophilus asiaticus
5a2]
Length = 208
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + AA + DAQ LG + E V+ D QQA + KA +Q + A LG +Y +
Sbjct: 43 LYLKAAEQRNADAQVNLGV-MYEEGKGVRKDLQQAIGWFRKAAEQGYVNAQNSLGVMYRS 101
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G+ + K++ A+ F +A+++G++ A + G + RG +V E L +
Sbjct: 102 GEGIPKNVQQAIEWFRKAAKQGNSKAQFSLGYMYYRGEEVREDLQQAAI----------- 150
Query: 231 NLESNLMNPVEKAKEQFEVAAQAGCNLGL 259
V+KA EQ E AAQ NLG+
Sbjct: 151 --------WVKKAAEQGEPAAQ--FNLGV 169
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G+ AQ+ LG + + V+ D QQA +++KA +Q P A + LG +Y G V
Sbjct: 119 AAKQGNSKAQFSLGY-MYYRGEEVREDLQQAAIWVKKAAEQGEPAAQFNLGVMYTRGKGV 177
Query: 175 KKDIASAL 182
++D+ A+
Sbjct: 178 RRDLQQAV 185
>gi|329119951|ref|ZP_08248623.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327463864|gb|EGF10178.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 354
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AA AAN G DAQ L Q QQA + +KA +Q H A LG++Y
Sbjct: 162 AAWFQKAANQGHADAQLFLASMYAEGIGVAQDRQQAAAWFQKAAEQGHAKAQVYLGSMYR 221
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
TGD VK++ AL + +A+ +G A A G + G V + A AA + +
Sbjct: 222 TGDGVKRNYQQALAWYRKAANQGDADAQFYLGLMYRIGEGVKRNYQQALAWYRKAADQGQ 281
Query: 230 ANLESNL 236
A+ ++ L
Sbjct: 282 ADAQNEL 288
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 97 LKYHVPGACK--AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVD 154
L +H G + AA AA+ G D+Q+ LG +Q+ QQA + +KA
Sbjct: 75 LYFHGRGVAQNYQQAAAWFQKAADQGYADSQFNLGIMSAEGLGMMQNHQQAATWFQKAAG 134
Query: 155 QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
Q H A + L +Y G V ++ A F +A+ +GHA A + S+ G+ V +
Sbjct: 135 QGHADAQFRLAKLYAWGLGVPQNHQQAAAWFQKAANQGHADAQLFLASMYAEGIGVAQDR 194
Query: 215 TKLNAKRVSAAKKARANLESNL 236
+ A AA++ A + L
Sbjct: 195 QQAAAWFQKAAEQGHAKAQVYL 216
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD DAQ+ LG R+ ++ QQA + KA DQ A LG +Y G+ V
Sbjct: 240 AANQGDADAQFYLGLMYRIGEGVKRNYQQALAWYRKAADQGQADAQNELGIMYAAGEGVA 299
Query: 176 KDIASALWCFHR 187
K+ A+ F++
Sbjct: 300 KNDQQAIEWFNK 311
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQ+ LG Q+ QQA + +KA DQ + + + LG + G + ++ A
Sbjct: 68 AQHNLGLLYFHGRGVAQNYQQAAAWFQKAADQGYADSQFNLGIMSAEGLGMMQNHQQAAT 127
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
F +A+ +GHA A L G+ VP+ + A AA + A+ +
Sbjct: 128 WFQKAAGQGHADAQFRLAKLYAWGLGVPQNHQQAAAWFQKAANQGHADAQ 177
>gi|68304974|gb|AAY89985.1| hypothetical protein PM1611 [uncultured bacterium BAC13K9BAC]
Length = 145
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A G+ DA Y + L+ + ++ +AF Y+ KA + P A++ LG +Y G
Sbjct: 29 LLSPIAEEGNVDALYRMAIMLQNGLGCLANEDKAFLYMTKAAEDGLPLAMHALGFMYFEG 88
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+C +KD + F RA+ +G G+A G + G V + L K
Sbjct: 89 ECTEKDSNLCIKWFERAAAEGMMGSATTLGMIYEDGKIVKQDLKK 133
>gi|90416741|ref|ZP_01224671.1| hypothetical protein GB2207_03799 [gamma proteobacterium HTCC2207]
gi|90331494|gb|EAS46730.1| hypothetical protein GB2207_03799 [marine gamma proteobacterium
HTCC2207]
Length = 322
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD DAQY LG +S +A + +KA DQ + A Y LG +Y TG+ V
Sbjct: 99 AADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKAADQGYAAAQYNLGNMYRTGEGVP 158
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A A+ + +A+ +G A G + G VPE + AA++ A+ + N
Sbjct: 159 ESAAEAVKWYRKAAGQGDVRAQYNLGLMYADGDGVPENGAEAVKWYRKAAEQGDADAQYN 218
Query: 236 L 236
L
Sbjct: 219 L 219
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD DAQY LG +S +A + +KA DQ A Y LG +Y G V
Sbjct: 63 AADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVP 122
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
+ A+ F +A+++G+A A G++ G VPE
Sbjct: 123 ESGTEAVKWFKKAADQGYAAAQYNLGNMYRTGEGVPES 160
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQY LG R +S +A + KA Q A Y LG +Y GD V
Sbjct: 135 AADQGYAAAQYNLGNMYRTGEGVPESAAEAVKWYRKAAGQGDVRAQYNLGLMYADGDGVP 194
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A A+ + +A+E+G A A G + G+ VPE + AA + RA+ +S
Sbjct: 195 ENGAEAVKWYRKAAEQGDADAQYNLGYMYADGLGVPENDAEAVKWFRKAAAQGRADAQSK 254
Query: 236 L 236
L
Sbjct: 255 L 255
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G AQY LG + ++ +A + +KA DQ A Y LG +Y G V +
Sbjct: 28 AEQGVATAQYNLGVMYADGDGVPENGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPE 87
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
A+ F +A+++G A A G + G+ VPE T+ AA + A + NL
Sbjct: 88 SGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKAADQGYAAAQYNL 147
Query: 237 MNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
N + E AA+A ++W ++
Sbjct: 148 GNMYRTGEGVPESAAEA-----VKWYRK 170
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY LG + ++ +A + KA +Q A Y LG +Y G V
Sbjct: 171 AAGQGDVRAQYNLGLMYADGDGVPENGAEAVKWYRKAAEQGDADAQYNLGYMYADGLGVP 230
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++ A A+ F +A+ +G A A G + G VPE
Sbjct: 231 ENDAEAVKWFRKAAAQGRADAQSKLGFMYGTGKGVPE 267
>gi|46446347|ref|YP_007712.1| hypothetical protein pc0713 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399988|emb|CAF23437.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 447
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
+ L AD + A+ L ++ V A AA+ GD AQY LGC
Sbjct: 101 IKLLADQGDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGR 160
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
V S+Q+A Y + A DQ H A +++G Y G V + A F A+++GHA A
Sbjct: 161 GVVHSEQEAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEA 220
Query: 197 AI 198
+
Sbjct: 221 QL 222
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 6 SKASTLKSAALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLI 65
SK T+ LG+ QSNQ ++ +L A + + Y + +R+
Sbjct: 257 SKLGTMYKKGLGVEQSNQEAIKYF--------KLAADQGDVNAQYNLAFMYAK--GKRVP 306
Query: 66 PLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQ 125
+ A + FEL AD A+ L ++ + A AA+ G+ DAQ
Sbjct: 307 QSHQEAIKYFELI--ADQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQGEADAQ 364
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
LG QSDQ+A Y + A DQ H A Y LGT+Y G V++ AL +
Sbjct: 365 CALGFMYANGLGVTQSDQEAAKYYKLAADQGHADAQYELGTMYKKGLGVEQSSQEALRYY 424
Query: 186 HRASEKGHAGAAIAYGSLL 204
A+E+G+ AAI S++
Sbjct: 425 QLAAEQGNTQAAIKIDSII 443
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A+ GD AQ ELG + QSD +AF Y + A DQ A Y LG +Y+ G V
Sbjct: 105 ADQGDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGRGVVH 164
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKK--ARANLES 234
A+ F A+++GHA A G +G V + + AAK+ A A LE
Sbjct: 165 SEQEAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLEL 224
Query: 235 NLM 237
L+
Sbjct: 225 KLI 227
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Query: 59 LNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAAN 118
+N R ++ + A + F+ A AD + A++ + + K AA
Sbjct: 157 INGRGVVHSEQEAIKYFKFA--ADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAK 214
Query: 119 MGDPDAQYELGCRLRVEN-DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
G +AQ EL +L +E+ D Q++Q+ F Y + A DQ A LGT+Y G V++
Sbjct: 215 QGHAEAQLEL--KLIIESHDIAQTNQETFKYFKLAADQGDVNAQSKLGTMYKKGLGVEQS 272
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
A+ F A+++G A + +G +VP+
Sbjct: 273 NQEAIKYFKLAADQGDVNAQYNLAFMYAKGKRVPQS 308
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Query: 67 LLKTAKENFE-LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQ 125
+ +T +E F+ L AD + +A+ L ++ K AA+ GD +AQ
Sbjct: 233 IAQTNQETFKYFKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLAADQGDVNAQ 292
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y L QS Q+A Y E DQ A LG +Y G + + A F
Sbjct: 293 YNLAFMYAKGKRVPQSHQEAIKYFELIADQGEAIAQCALGFMYFQGKGITQSHQEAAKYF 352
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPEC 213
A+++G A A A G + G+ V +
Sbjct: 353 KFAADQGEADAQCALGFMYANGLGVTQS 380
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 77 LALEADNSNTHARYWLSKLHLK-YHVPGACK-AMGAALLVDAANMGDPDAQYELGCRLRV 134
L AD + +A+Y L+ ++ K VP + + A+ L+ A+ G+ AQ LG
Sbjct: 280 FKLAADQGDVNAQYNLAFMYAKGKRVPQSHQEAIKYFELI--ADQGEAIAQCALGFMYFQ 337
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
QS Q+A Y + A DQ A LG +Y G V + A + A+++GHA
Sbjct: 338 GKGITQSHQEAAKYFKFAADQGEADAQCALGFMYANGLGVTQSDQEAAKYYKLAADQGHA 397
Query: 195 GAAIAYGSLLLRGVQVPEC 213
A G++ +G+ V +
Sbjct: 398 DAQYELGTMYKKGLGVEQS 416
>gi|189502234|ref|YP_001957951.1| hypothetical protein Aasi_0851 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497675|gb|ACE06222.1| hypothetical protein Aasi_0851 [Candidatus Amoebophilus asiaticus
5a2]
Length = 961
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Query: 117 ANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
A+ G AQY LG L V DYV+ A + ++A +Q H + Y LG +Y+ G
Sbjct: 541 ADQGHAHAQYNLGYMYEKGLGVAKDYVK----AIAWYKQAANQGHAKSQYALGVIYIEGQ 596
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V KD+ A+ + +A+ +GHA + + +G + + K A + AN
Sbjct: 597 GVAKDVRKAIEWYEKAANQGHADVQLKLAARYFKGEGIAKDYAKAIEWFQKTANQGHANA 656
Query: 233 ESNLMNPVEKA 243
+ NL EK
Sbjct: 657 QYNLGYVHEKG 667
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G DAQ +LG R + DY ++ + + EK DQ H A Y LG +Y G
Sbjct: 504 AAKQGHADAQLKLGARYFKGEGIAKDYAKAKE----WYEKTADQGHAHAQYNLGYMYEKG 559
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V KD A+ + +A+ +GHA + A G + + G V + + K AA + A+
Sbjct: 560 LGVAKDYVKAIAWYKQAANQGHAKSQYALGVIYIEGQGVAKDVRKAIEWYEKAANQGHAD 619
Query: 232 LESNL 236
++ L
Sbjct: 620 VQLKL 624
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 10/149 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN +QY LG + +++A + EKA +Q H A + LG +Y G+ V+
Sbjct: 684 AANQEHAKSQYALGVIYESGEGVEKDEKKAIEWYEKAANQGHARAQFSLGVMYGEGEGVE 743
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+ +GHA A G + G V + K AA + A + N
Sbjct: 744 KDERKAVEWYEKAANQGHARAQFKLGWMYGEGRGVSQDYAKAIEWSEKAANQGHARAQYN 803
Query: 236 LMNPVE----------KAKEQFEVAAQAG 254
L E KA E F+ AA G
Sbjct: 804 LGWIYENWKGVAKDYAKAVEWFQKAANQG 832
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G AQY LG + E V D ++A + +KA Q H A LG Y G+ +
Sbjct: 468 AANQGYVKAQYNLGW-MYAEGRGVDKDARKAIEWYKKAAKQGHADAQLKLGARYFKGEGI 526
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE- 233
KD A A + + +++GHA A G + +G+ V + K A AA + A +
Sbjct: 527 AKDYAKAKEWYEKTADQGHAHAQYNLGYMYEKGLGVAKDYVKAIAWYKQAANQGHAKSQY 586
Query: 234 ---------SNLMNPVEKAKEQFEVAAQAG 254
+ V KA E +E AA G
Sbjct: 587 ALGVIYIEGQGVAKDVRKAIEWYEKAANQG 616
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G +QY L V+ ++A + +KA +Q + A Y LG +Y G V
Sbjct: 432 AADQGHATSQYNLAWMYADGQGVVKDTRKAVEWFQKAANQGYVKAQYNLGWMYAEGRGVD 491
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+++GHA A + G+ +G + + K A + A+ + N
Sbjct: 492 KDARKAIEWYKKAAKQGHADAQLKLGARYFKGEGIAKDYAKAKEWYEKTADQGHAHAQYN 551
Query: 236 LMNPVEKA 243
L EK
Sbjct: 552 LGYMYEKG 559
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQ++LG Q +A + EKA +Q H A Y LG +Y V
Sbjct: 756 AANQGHARAQFKLGWMYGEGRGVSQDYAKAIEWSEKAANQGHARAQYNLGWIYENWKGVA 815
Query: 176 KDIASALWCFHRASEKGHA 194
KD A A+ F +A+ +G+A
Sbjct: 816 KDYAKAVEWFQKAANQGYA 834
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY++G ++ +A + EKA Q H A LG +Y G V ++ A A+
Sbjct: 296 AQYKVGVMCAEGRGIAKNAAKAVEWYEKAAKQGHAVAQSNLGWMYADGRGVAQNYAKAIK 355
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
F +A+ +GHA A G + G+ V + K AAK+ A+ +SNL
Sbjct: 356 WFQKAANQGHASAQYKLGWMYAEGLGVVKDARKAIEWYERAAKQGDASAQSNL 408
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 10/149 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG + ++A + +KA DQ H + Y L +Y G V
Sbjct: 396 AAKQGDASAQSNLGVSYANGWGVAKDARKAIKWFQKAADQGHATSQYNLAWMYADGQGVV 455
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE-- 233
KD A+ F +A+ +G+ A G + G V + K AAK+ A+ +
Sbjct: 456 KDTRKAVEWFQKAANQGYVKAQYNLGWMYAEGRGVDKDARKAIEWYKKAAKQGHADAQLK 515
Query: 234 --------SNLMNPVEKAKEQFEVAAQAG 254
+ KAKE +E A G
Sbjct: 516 LGARYFKGEGIAKDYAKAKEWYEKTADQG 544
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQY+LG V+ ++A + E+A Q A LG Y G V
Sbjct: 360 AANQGHASAQYKLGWMYAEGLGVVKDARKAIEWYERAAKQGDASAQSNLGVSYANGWGVA 419
Query: 176 KDIASALWCFHRASEKGHA 194
KD A+ F +A+++GHA
Sbjct: 420 KDARKAIKWFQKAADQGHA 438
>gi|89897284|ref|YP_520771.1| hypothetical protein DSY4538 [Desulfitobacterium hafniense Y51]
gi|89336732|dbj|BAE86327.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 900
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 6/138 (4%)
Query: 78 ALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELG-CRLRV 134
+LE + + +Y L ++ Y G K + AA+ L AA +G+ AQY LG L
Sbjct: 636 SLEKQSHDDKLQYRLG--YMLYTGTGTEKDVAAAVEYLEKAARLGNVHAQYMLGKIYLDA 693
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
++ Y ++ +A ++ KA + + A Y LG +Y G V KDI AL F A+E+ +
Sbjct: 694 KSGY-ENIGKAIQWLTKAAESGNSLAQYALGKLYRDGHQVGKDIGKALALFTLAAEQDNE 752
Query: 195 GAAIAYGSLLLRGVQVPE 212
AA A G L L G VP+
Sbjct: 753 YAAYALGKLFLVGTDVPK 770
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
D QY LG L + A Y+EKA + A Y+LG +YL ++I
Sbjct: 643 DDKLQYRLGYMLYTGTGTEKDVAAAVEYLEKAARLGNVHAQYMLGKIYLDAKSGYENIGK 702
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+ +A+E G++ A A G L G QV + + K
Sbjct: 703 AIQWLTKAAESGNSLAQYALGKLYRDGHQVGKDIGK 738
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 69 KTAKENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPD 123
K+ EN A++ A++ N+ A+Y L KL+ H G AL AA +
Sbjct: 694 KSGYENIGKAIQWLTKAAESGNSLAQYALGKLYRDGHQVGKDIGKALALFTLAAEQDNEY 753
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
A Y LG V D + + A ++ + + + A Y LG ++L G + +D +A+
Sbjct: 754 AAYALGKLFLVGTDVPKDVEAAVKWLTASAQRGNQYAQYTLGKLFLMGRDLPRDRDAAIR 813
Query: 184 CFHRASEKGH 193
++E+G+
Sbjct: 814 WLTLSAEQGN 823
>gi|332653260|ref|ZP_08419005.1| putative tetratricopeptide repeat containing protein
[Ruminococcaceae bacterium D16]
gi|332518406|gb|EGJ48009.1| putative tetratricopeptide repeat containing protein
[Ruminococcaceae bacterium D16]
Length = 593
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 89 RYWLSKLHLKYHVPGACKAMGAALLVD----------AANMGDPDAQYELGCRLRVENDY 138
R W + + H G C G +L D +A G +QY LG L+ +
Sbjct: 365 RLWDAGFTVAAHQLGKCWRDGLGVLPDDEKAELWLQRSAEAGHDFSQYALGKLLQRQ--- 421
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ +A + EKA +Q +P + Y LG +YL G+ V KD+A AL +A+E+G A
Sbjct: 422 -KRIDEAISWYEKAAEQDNPYSAYQLGKLYLQGEQVPKDVAKALEYLTQAAEQGSQYAQY 480
Query: 199 AYGSLLLRG 207
G L L G
Sbjct: 481 TLGKLYLMG 489
>gi|422023874|ref|ZP_16370376.1| hypothetical protein OO7_15199 [Providencia sneebia DSM 19967]
gi|414091889|gb|EKT53570.1| hypothetical protein OO7_15199 [Providencia sneebia DSM 19967]
Length = 115
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+++ A GD +AQY +G V + +A + +KA +Q H A Y+LG +Y +GD
Sbjct: 15 ILEKAEQGDVNAQYNIGTIYDVGEGIPKDTAKAIGWYQKAAEQGHAKAQYMLGIMYESGD 74
Query: 173 CVKKDIASALWCFHRASEKG 192
C+ D A A+ F +A++ G
Sbjct: 75 CLPYDAAKAVEWFKKAAKNG 94
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+EKA +Q A Y +GT+Y G+ + KD A A+ + +A+E+GHA A G + G
Sbjct: 16 LEKA-EQGDVNAQYNIGTIYDVGEGIPKDTAKAIGWYQKAAEQGHAKAQYMLGIMYESG- 73
Query: 209 QVPECLTKLNAKRVSAAKKARAN 231
+CL AK V KKA N
Sbjct: 74 ---DCLPYDAAKAVEWFKKAAKN 93
>gi|260753304|ref|YP_003226197.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552667|gb|ACV75613.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 455
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 52/114 (45%)
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
+AQ LG R Q DQ+A Y +KA DQ AL LG Y+TG V ++ L
Sbjct: 190 EAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFYMTGRGVPQNYERGL 249
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
CF +A++K + A G+ G VP+ K AA K A E NL
Sbjct: 250 DCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNL 303
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD +A+Y LG R Q D +A ++ +KA DQ H A +G Y V
Sbjct: 291 AADKGDAEAEYNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLNMGFAYYQARGVA 350
Query: 176 KDIASALWCFHRASEKGHAGA----AIAYGSLLLRGVQVPECLTK 216
+D A ++ + +A+E+G + A AIAY GV P+ L +
Sbjct: 351 QDYARGIFLYRKAAEQGDSKAEYNLAIAY----YNGVGEPKDLAQ 391
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 93 SKLHLKYHVPGACK---AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYI 149
S L L Y+V A AM A AA+ G AQY L QSD+QA ++
Sbjct: 48 SNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYSTGEGVAQSDKQAAFWY 107
Query: 150 EKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ 209
EKA +Q A Y L Y G V+++ AL+ +A+++ A G G+
Sbjct: 108 EKAAEQGIDEAEYNLALAYEQGKGVEQNYERALFWLKKAADQNFFKAETHLGLAYQAGIM 167
Query: 210 VP 211
+P
Sbjct: 168 LP 169
>gi|237748158|ref|ZP_04578638.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379520|gb|EEO29611.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 404
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G PDA+Y + R+ V +D+ + ++++A P A YL+G YL G V
Sbjct: 280 AAEQGYPDAEYAM-SRMAELGIGVTADKAWSMMWLDRAAHHGMPLAQYLMGMAYLEGKSV 338
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+D+ A F++A+ +G+A A + G + RG+ VP
Sbjct: 339 PQDLPVAAAWFYKAAMQGNADAQLRLGYMYARGIGVP 375
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G P AQ+ L + QS++QA ++ A +Q +P A Y + + G
Sbjct: 241 LTKAAKQGMPMAQFYLALMYQRGRGVEQSNEQALHWNMLAAEQGYPDAEYAMSRMAELGI 300
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V D A ++ RA+ G A G L G VP+ L A AA + A+
Sbjct: 301 GVTADKAWSMMWLDRAAHHGMPLAQYLMGMAYLEGKSVPQDLPVAAAWFYKAAMQGNADA 360
Query: 233 ESNLMN--------PVEKAK--EQFEVAAQAGCNLGLRWLQRIE 266
+ L PV+K K E AA AG + +WL++++
Sbjct: 361 QLRLGYMYARGIGVPVDKPKAVAWLEKAASAGNTVAGQWLKQLD 404
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 80 EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
+AD + + +WL + ++ G G L+ +A G AQ LG L +V
Sbjct: 100 QADQGDAKSAFWLGRFTVEDSRDGKTIDEGIRLIRRSAEGGFVRAQLYLGT-LYANGTHV 158
Query: 140 QSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
++D +A ++ +A Q P LG +Y G V +D+ +L+ +A+++G A +
Sbjct: 159 KADPHEAEKWLSRAAGQGSPMVQLYLGLMYGHGKGVPRDLNKSLFWVEKAADRGLPHAQL 218
Query: 199 AYG 201
A G
Sbjct: 219 ARG 221
>gi|303275354|ref|XP_003056973.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461325|gb|EEH58618.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA +GD +AQY LG R +E DY D + +Y+ KA Q H GA+ LG +Y G
Sbjct: 50 LTRAAELGDANAQYNLGLRHYIERDY---DAASEWYL-KAAAQNHTGAMNYLGWLYYEGL 105
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLL 205
V+K+ A+A F + KG+A A Y LL
Sbjct: 106 GVEKNKATAAQWFLGVALKGNADAQNRYEVYLL 138
>gi|384411625|ref|YP_005620990.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931999|gb|AEH62539.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 455
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 52/114 (45%)
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
+AQ LG R Q DQ+A Y +KA DQ AL LG Y+TG V ++ L
Sbjct: 190 EAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFYMTGRGVPQNYERGL 249
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
CF +A++K + A G+ G VP+ K AA K A E NL
Sbjct: 250 DCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNL 303
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD +A+Y LG R Q D +A ++ +KA DQ H A +G Y V
Sbjct: 291 AADKGDAEAEYNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLNMGFAYYQARGVA 350
Query: 176 KDIASALWCFHRASEKGHAGA----AIAYGSLLLRGVQVPECLTK 216
+D A ++ + +A+E+G + A AIAY GV P+ L +
Sbjct: 351 QDYARGIFLYRKAAEQGDSKAEYNLAIAY----YNGVGEPKDLAQ 391
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 93 SKLHLKYHVPGACK---AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYI 149
S L L Y+V A AM A AA+ G AQY L QSD+QA ++
Sbjct: 48 SNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYATGEGVAQSDKQAAFWY 107
Query: 150 EKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ 209
EKA +Q A Y L Y G V+++ AL+ +A+++ A G G+
Sbjct: 108 EKAAEQGIDEAEYNLALAYEQGKGVEQNYERALFWLKKAADQNFFKAETHLGLAYQAGIM 167
Query: 210 VP 211
+P
Sbjct: 168 LP 169
>gi|5852329|gb|AAD54009.1|AF088857_1 hypothetical protein [Vogesella indigofera]
Length = 268
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +AQ+ LG R + Q +A + +A Q P A L +YL G V
Sbjct: 39 AAEQGDANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVN 98
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++ A AL F +A+ +G A A + G++L+ G P+
Sbjct: 99 QNDAEALAWFRKAATQGQAEAQLNLGAMLMNGQGTPK 135
>gi|354594420|ref|ZP_09012459.1| hypothetical protein CIN_11550 [Commensalibacter intestini A911]
gi|353672096|gb|EHD13796.1| hypothetical protein CIN_11550 [Commensalibacter intestini A911]
Length = 621
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL AAN + AQY L + + Q +A ++ EKA Q + A Y LG +YL G
Sbjct: 277 LLKKAANGNNVQAQYGLANLYDLGDKIPQDSSKAAFWYEKAAKQGNIDAAYALGEMYLEG 336
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
V +D +A++ G+A A + S+ +G+ VP
Sbjct: 337 RGVGEDFTKGFQYLEQAAQNGNADAQLKIASIYFKGINVP 376
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 58 ELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
+L D+ IP ++K F A N A Y L +++L+ G G L AA
Sbjct: 298 DLGDK--IPQ-DSSKAAFWYEKAAKQGNIDAAYALGEMYLEGRGVGEDFTKGFQYLEQAA 354
Query: 118 NMGDPDAQ------YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
G+ DAQ Y G + ++++ +A + +K+ +Q + ALY LG +Y G
Sbjct: 355 QNGNADAQLKIASIYFKGINVPIDHN------KALEWYQKSAEQKNKVALYTLGNIYEQG 408
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
V KDI+ A+ + A+E G A + S+ G VP +K
Sbjct: 409 LDVPKDISKAVKYYQEAAEGGDVDAQLKLASMYSTGTNVPVDYSK 453
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 87/232 (37%), Gaps = 50/232 (21%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCR----LRVEN 136
ADN N A +++ L+ AA G+ DAQ+ LG + VE
Sbjct: 175 ADNGNVKAIFYIGSLYYDGQSFPKNPKKAFPYFEKAAYKGNTDAQFYLGLMYANGIGVEQ 234
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT-------------------------- 170
DY +A Y+ EK+ + HP A Y L +Y
Sbjct: 235 DY----SKAIYWYEKS-SKTHPTAAYNLAKMYKEGLGVEVNYNTAFELLKKAANGNNVQA 289
Query: 171 ----------GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAK 220
GD + +D + A + + +A+++G+ AA A G + L G V E TK
Sbjct: 290 QYGLANLYDLGDKIPQDSSKAAFWYEKAAKQGNIDAAYALGEMYLEGRGVGEDFTKGFQY 349
Query: 221 RVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRL 272
AA+ A+ + + + K + N L W Q+ E++ ++
Sbjct: 350 LEQAAQNGNADAQLKIASIYFKG-----INVPIDHNKALEWYQKSAEQKNKV 396
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 136 NDYVQSD------QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRAS 189
N Y+Q D ++A Y+E++ A Y+LG +Y G +DI+ AL + +A+
Sbjct: 44 NMYIQGDGNSQDFKKAREYLEQSAAAGSDNAQYMLGVMYEKGQGAPQDISKALEYYKQAA 103
Query: 190 EKGHAGAAIAYGSLLLRGVQVPE 212
+K HA A A G++ VPE
Sbjct: 104 KKNHAKAEYALGTMYDHARGVPE 126
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 68 LKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQ 125
K A+E E + A + N A+Y L ++ K GA + + AL AA A+
Sbjct: 56 FKKAREYLEQSAAAGSDN--AQYMLGVMYEK--GQGAPQDISKALEYYKQAAKKNHAKAE 111
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y LG + +A + EKA Q + A Y LG Y G + K+I +
Sbjct: 112 YALGTMYDHARGVPEDHAEAIKWYEKAAKQNNSSAEYALGYAYFKGIGIAKNIEKGMQYL 171
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPE 212
++++ G+ A GSL G P+
Sbjct: 172 QKSADNGNVKAIFYIGSLYYDGQSFPK 198
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAM--GAALLVDAANMGDPDAQYELGCRLRVENDY 138
A +N+ A Y L + K G K + G L +A+ G+ A + +G +
Sbjct: 139 AKQNNSSAEYALGYAYFK--GIGIAKNIEKGMQYLQKSADNGNVKAIFYIGSLYYDGQSF 196
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
++ ++AF Y EKA + + A + LG +Y G V++D + A++ + ++S K H AA
Sbjct: 197 PKNPKKAFPYFEKAAYKGNTDAQFYLGLMYANGIGVEQDYSKAIYWYEKSS-KTHPTAAY 255
Query: 199 AYGSLLLRGVQV 210
+ G+ V
Sbjct: 256 NLAKMYKEGLGV 267
>gi|283797091|ref|ZP_06346244.1| Sel1 repeat family protein [Clostridium sp. M62/1]
gi|291075507|gb|EFE12871.1| Sel1 repeat protein [Clostridium sp. M62/1]
Length = 897
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G+ AQY LG +L + N + +QA +IEKA + + A Y L +Y G+ V
Sbjct: 673 AAQLGNIHAQYALG-KLWLTNG-AGNLKQAVEWIEKAAEAGNGAAQYALAKIYRDGEHVS 730
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
KDI A+ F ++E+G+ AA G L L G ++P+
Sbjct: 731 KDIGKAVDLFTLSAEQGNGYAAYQLGKLYLAGEEIPK 767
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 84 SNTHARYWLSKLHLKYHVPGACKAMGAALLVD-AANMGDPDAQYELGCRLRVENDYVQSD 142
N HA+Y L KL L GA A ++ AA G+ AQY L ++ + ++V D
Sbjct: 677 GNIHAQYALGKLWL---TNGAGNLKQAVEWIEKAAEAGNGAAQYAL-AKIYRDGEHVSKD 732
Query: 143 QQAFYYIEKAVD-------QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
I KAVD Q + A Y LG +YL G+ + KD+ +A+ A+EKG++
Sbjct: 733 ------IGKAVDLFTLSAEQGNGYAAYQLGKLYLAGEEIPKDVQAAVRWMEAAAEKGNSY 786
Query: 196 AAIAYGSLLLRGVQVP 211
A A G L L G VP
Sbjct: 787 ALYALGKLYLCGKDVP 802
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 68 LKTAKENFELALEADNSNTHARYWLSKLHLK-YHVPGACKAMGAA--LLVDAANMGDPDA 124
LK A E E A EA N A+Y L+K++ HV K +G A L +A G+ A
Sbjct: 697 LKQAVEWIEKAAEAGNGA--AQYALAKIYRDGEHV---SKDIGKAVDLFTLSAEQGNGYA 751
Query: 125 QYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
Y+LG +L + + + D Q A ++E A ++ + ALY LG +YL G V D A++
Sbjct: 752 AYQLG-KLYLAGEEIPKDVQAAVRWMEAAAEKGNSYALYALGKLYLCGKDVPYDKEKAVF 810
Query: 184 CFHRASEKGHAGAAI 198
++E+G+ A I
Sbjct: 811 YLQASAEQGNMYAQI 825
>gi|421653723|ref|ZP_16094055.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408512425|gb|EKK14068.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 230
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 117 ANMGDPDAQYELGCRL-RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G AQY LG L E V++ +QAF ++ A GA Y LG +Y TG V+
Sbjct: 34 AEQGQSVAQYHLGMMLLSGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVE 93
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD+ A F +A++K HA A L RG + + AA++ E N
Sbjct: 94 KDMKRAFEYFAKAADKSHAKAQYNLAVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYN 153
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKR 271
L + +K + QA L+W + E +R
Sbjct: 154 LAHLYKKGHGVAQSDEQA-----LKWYTKAAEHNER 184
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 69 KTAKENFE-LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
K K FE A AD S+ A+Y L+ L+ + AA G P A+Y
Sbjct: 94 KDMKRAFEYFAKAADKSHAKAQYNLAVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYN 153
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
L + + QSD+QA + KA + A Y L +YL G+ K++ A F +
Sbjct: 154 LAHLYKKGHGVAQSDEQALKWYTKAAEHNERDAQYNLAQMYLNGEGTPKNLQLAKKWFQQ 213
Query: 188 ASEKGHAGA 196
A++ G+ A
Sbjct: 214 AADAGNVDA 222
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A G A+Y LG + ++AF Y KA D+ H A Y L +Y G+
Sbjct: 67 LTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKSHAKAQYNLAVLYDRGE 126
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAA----KKA 228
++ A + RA+E+G+ A L +G V + + AA + A
Sbjct: 127 GTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAEHNERDA 186
Query: 229 RANLESNLMNP------VEKAKEQFEVAAQAG 254
+ NL +N ++ AK+ F+ AA AG
Sbjct: 187 QYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 218
>gi|326201173|ref|ZP_08191045.1| Sel1 domain protein repeat-containing protein [Clostridium
papyrosolvens DSM 2782]
gi|325988741|gb|EGD49565.1| Sel1 domain protein repeat-containing protein [Clostridium
papyrosolvens DSM 2782]
Length = 579
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+AAN GD +AQ LG Y ++AF KA D+ +P A+ LG +YL G
Sbjct: 101 FYTEAANKGDAEAQNRLGDIYDGYEGYPVDYKKAFQLFSKAADRNYPDAIMNLGWMYLNG 160
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQV 210
V D A F +A++KG A A G + L RGVQ+
Sbjct: 161 YSVDLDYNKAKELFEQAAKKGSAAAYCQLGDMYLEGRGVQI 201
>gi|284799409|ref|ZP_05983910.2| TPR repeat protein [Neisseria subflava NJ9703]
gi|284797776|gb|EFC53123.1| TPR repeat protein [Neisseria subflava NJ9703]
Length = 420
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 116 AANMGDPDAQYELG----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ DAQY LG V DYV +A + KA +Q A + LG +YL G
Sbjct: 220 AAEQGNVDAQYNLGDMYASGEGVRQDYV----EAIKWYRKAAEQGDAQAQFNLGMMYLQG 275
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
V++D A A+ F RA+E+GHA A G + G
Sbjct: 276 QGVRQDNAQAVQWFGRAAEQGHAKAQYNLGVMYANG 311
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD QY LG V DY+ QA + KA +Q + A Y LG +Y +G
Sbjct: 184 AAGHGDAIGQYNLGVAYANGEGVHQDYI----QAIGWYRKAAEQGNVDAQYNLGDMYASG 239
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVS----AAKK 227
+ V++D A+ + +A+E+G A A G + L+G + + + NA+ V AA++
Sbjct: 240 EGVRQDYVEAIKWYRKAAEQGDAQAQFNLGMMYLQG----QGVRQDNAQAVQWFGRAAEQ 295
Query: 228 ARANLESNL 236
A + NL
Sbjct: 296 GHAKAQYNL 304
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + A++ L ++L+ A AA G AQY LG Q
Sbjct: 257 AEQGDAQAQFNLGMMYLQGQGVRQDNAQAVQWFGRAAEQGHAKAQYNLGVMYANGQGIRQ 316
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
D QA + KA +Q A + LG +Y G V++D A A+ + +A+E+G+A A +
Sbjct: 317 DDVQAVRWYHKAAEQGVAQAQFNLGIMYDQGQGVRQDDAQAVHWYRKAAEQGYAEAQYNF 376
Query: 201 GSLLLRGVQVPE 212
G + G V +
Sbjct: 377 GVMYANGEGVRQ 388
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 10/143 (6%)
Query: 104 ACKAMGAALLVD----------AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAV 153
AC +G A L + AA GDP+AQ +G Q ++ A + KA
Sbjct: 18 ACFGLGQAALAESIPDFKNMLRAAEQGDPEAQLSIGAMYANGQGISQDNRLAVQWFRKAA 77
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
+Q + A + LG +Y G V +D A + +A+E+G GA G L G V +
Sbjct: 78 EQENAKAQFNLGVMYQLGQGVGQDYVQAAEWYRKAAEQGDTGAQNNLGMLYQNGQGVSQD 137
Query: 214 LTKLNAKRVSAAKKARANLESNL 236
+ AA + + + NL
Sbjct: 138 YAQAAEWFYRAANQENTDAQLNL 160
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG Q D QA ++ KA +Q + A Y G +Y G+ V+
Sbjct: 328 AAEQGVAQAQFNLGIMYDQGQGVRQDDAQAVHWYRKAAEQGYAEAQYNFGVMYANGEGVR 387
Query: 176 KDIASALWCFHRASEKG 192
++ A F +A + G
Sbjct: 388 QNYKIAKDWFGKACDNG 404
>gi|452966969|gb|EME71976.1| TPR repeat-containing SEL1 subfamily protein [Magnetospirillum sp.
SO-1]
Length = 390
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AA GDP AQ+ LG +R S + A + ++A DQ GA++ LG +Y G V
Sbjct: 220 EAAKQGDPQAQFNLGNMIRQGRGVEASPEVAAKWFKQAADQGDAGAIFALGALYEAGAGV 279
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTKLNAKRVSAAKKARANL 232
++D A+ + +A+++G A A ++L RG + +R + A A
Sbjct: 280 ERDETQAVELYRQAADQGLATALHNLANMLRQGRGTDPDPTEAAMLCRRAAEQGLAEAQY 339
Query: 233 ESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
+M + EQ E AA +RW +R
Sbjct: 340 NYAVMLALGVGVEQDEAAA-------IRWFRR 364
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 52/127 (40%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA GD QY LG QS+ A + +A Q P A + LG + G
Sbjct: 181 LYTQAAKAGDARGQYSLGVMYDQGLGVAQSNAHALKWFREAAKQGDPQAQFNLGNMIRQG 240
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V+ A F +A+++G AGA A G+L G V T+ AA + A
Sbjct: 241 RGVEASPEVAAKWFKQAADQGDAGAIFALGALYEAGAGVERDETQAVELYRQAADQGLAT 300
Query: 232 LESNLMN 238
NL N
Sbjct: 301 ALHNLAN 307
>gi|262402451|ref|ZP_06079012.1| hypothetical protein VOA_000424 [Vibrio sp. RC586]
gi|262351233|gb|EEZ00366.1| hypothetical protein VOA_000424 [Vibrio sp. RC586]
Length = 337
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 95 LHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVD 154
L L + P A A G L+ A +P AQ++L + Q+ +AFY+ +A +
Sbjct: 8 LILLFSFPLAA-ADGITELIKLAKEREPQAQFQLAIAYQSGTSVPQNLNEAFYWFLQAAE 66
Query: 155 QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG------SLLLRGV 208
Q HP A+ + ++TG V+KD A + + + G+A A+ S + +
Sbjct: 67 QNHPAAIAQVANAFITGQGVEKDALQAQYWLIKLALTGNAQASTTLAKWYEQHSTPIEPL 126
Query: 209 QVPECLTKLNAKRVSAAKKARANL 232
+ E ++NA SAA++ A L
Sbjct: 127 DLAEIWYRVNANHDSAAEQGYARL 150
>gi|238022131|ref|ZP_04602557.1| hypothetical protein GCWU000324_02037 [Kingella oralis ATCC 51147]
gi|237866745|gb|EEP67787.1| hypothetical protein GCWU000324_02037 [Kingella oralis ATCC 51147]
Length = 252
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A G+ AQY LG R +S QA + +KA DQ + A Y LG +Y TG
Sbjct: 72 LLKPVAEQGEAIAQYYLGLMYRDGQGTTKSYTQAMIWFQKAADQNYAEAQYDLGNMYFTG 131
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
V +D A + +A+ +G A A G + +G
Sbjct: 132 RGVNQDTEQAFEWYQKAANQGLAHAQYTLGFMYSKG 167
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALL--VDAANMGDPDAQYELGCRLRVENDY 138
A+ A+Y+L ++ G K+ A++ AA+ +AQY+LG
Sbjct: 77 AEQGEAIAQYYLGLMYRDGQ--GTTKSYTQAMIWFQKAADQNYAEAQYDLGNMYFTGRGV 134
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
Q +QAF + +KA +Q A Y LG +Y G+ V +D A + +A+ +G A A
Sbjct: 135 NQDTEQAFEWYQKAANQGLAHAQYTLGFMYSKGNGVNQDDKQAFEWYQKAANQGLAIAQN 194
Query: 199 AYGSLLLRGVQVPE-------CLTKLNAKRVSAAKKARANLES 234
G + +G V + C K+ A+ + AN+++
Sbjct: 195 NLGWMYHQGRGVEQDFQQAKICYQKVLAQPDTPENPNIANIKA 237
>gi|303286897|ref|XP_003062738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456255|gb|EEH53557.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 202
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A +G+ DAQ LG E D+ A + E+A Q H A+Y LG +Y G+
Sbjct: 50 LEKGAELGNADAQRFLGFGYNTEGDH----DAALKWYERAAAQGHTSAMYSLGFLYKEGE 105
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
V+++I +A + RA+ KGHA + YG+ L
Sbjct: 106 GVEQNITTAAEWWRRAACKGHAPSQCNYGAYL 137
>gi|123437585|ref|XP_001309587.1| TKL family protein kinase [Trichomonas vaginalis G3]
gi|121891320|gb|EAX96657.1| TKL family protein kinase [Trichomonas vaginalis G3]
Length = 1103
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVE-NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A GD +A YE L E N Y S QQ+ Y++KA D+ H A Y G + G
Sbjct: 761 LKKKAESGDINAMYEYALILAAESNKY--SAQQSAIYMKKAADKGHLEAKYQCGNYLVRG 818
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K+D++ A F+ A++ GH+GA + + L G+ V + L K
Sbjct: 819 FGTKQDLSKAAIYFYDAAKNGHSGAMLECSNFLSNGMGVKKDLRK 863
Score = 43.1 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
+ A FE A A ++N + Y+L K+ + + K G L AA G +AQYE
Sbjct: 328 QNASVEFEKA--ARSNNIESLYYLGKMIIDGKINNYDKIQGIKFLKKAAEGGHAEAQYEC 385
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
G L D + A + ++A PGA+ +L + L GD V+ A +
Sbjct: 386 GMALYKGEDVGCNKIMAAEFFKQAAKSYLPGAIIMLSKMLLVGDGVEMSKAKS 438
>gi|255264741|ref|ZP_05344083.1| Sel1 domain protein repeat-containing protein [Thalassiobium sp.
R2A62]
gi|255107076|gb|EET49750.1| Sel1 domain protein repeat-containing protein [Thalassiobium sp.
R2A62]
Length = 311
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG R Q +A + KA +Q H A Y LG +Y T V
Sbjct: 123 AAGQGDARAQTNLGVMYRNGKGVPQDYAEAVSWYRKAAEQGHAKAQYNLGFMYYTAQGVP 182
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G AGA G + G V + T+ AA++ A ++N
Sbjct: 183 QDYTEAVSWYRKAAEQGSAGAQTTLGVMYENGQGVLQDYTEAAIWYRKAAEQGGALAQNN 242
Query: 236 L 236
L
Sbjct: 243 L 243
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q +A + KA +Q GA LG +Y G V
Sbjct: 159 AAEQGHAKAQYNLGFMYYTAQGVPQDYTEAVSWYRKAAEQGSAGAQTTLGVMYENGQGVL 218
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A + +A+E+G A A G + G VP+
Sbjct: 219 QDYTEAAIWYRKAAEQGGALAQNNLGVMYDNGQGVPQ 255
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG + +A + A Q A LG +Y G V
Sbjct: 87 AAEQGHARAQTNLGVMYENGKGVTRDYTEALSWYRTAAGQGDARAQTNLGVMYRNGKGVP 146
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+GHA A G + VP+ T+ + AA++ A ++
Sbjct: 147 QDYAEAVSWYRKAAEQGHAKAQYNLGFMYYTAQGVPQDYTEAVSWYRKAAEQGSAGAQTT 206
Query: 236 L 236
L
Sbjct: 207 L 207
>gi|260913455|ref|ZP_05919933.1| Sel1 domain protein [Pasteurella dagmatis ATCC 43325]
gi|260632395|gb|EEX50568.1| Sel1 domain protein [Pasteurella dagmatis ATCC 43325]
Length = 189
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A GD AQ+ +G R+ + D V+ D+ QA + +K+ +Q HP A Y L +Y
Sbjct: 65 LWLSRAEQGDMSAQFNVG-RMYDDGDGVEQDKRQALKWYQKSAEQNHPDAQYHLALMYSE 123
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
GD + +D A + RA+ +G A G+L G V
Sbjct: 124 GDGIAQDFKQAYRWYSRAAVQGDPRAIYNLGTLFFNGEGV 163
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY L + Q +QA+ + +A Q P A+Y LGT++ G+ V+
Sbjct: 105 SAEQNHPDAQYHLALMYSEGDGIAQDFKQAYRWYSRAAVQGDPRAIYNLGTLFFNGEGVE 164
Query: 176 KDIASALWCFHRASEKG 192
+D A A F A + G
Sbjct: 165 RDRARAKIYFKEACKAG 181
>gi|375105138|ref|ZP_09751399.1| TPR repeat-containing protein [Burkholderiales bacterium JOSHI_001]
gi|374665869|gb|EHR70654.1| TPR repeat-containing protein [Burkholderiales bacterium JOSHI_001]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ + QY +G L+ + A + KA DQ H A + LG +YL+G+ VK
Sbjct: 83 AAAQGNVEGQYNMGVMLQAGRGLARDPAAAADWYRKAADQGHASAAHNLGGLYLSGNGVK 142
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
KD A AL +A++ G+ GA G + G+ V + T
Sbjct: 143 KDEAQALLWLRKAADGGNVGAINKIGLMYRIGMGVAKDPT 182
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+L AA GDPDAQ LG + D QA + KA Q + Y +G + G
Sbjct: 43 ILRTAAEQGDPDAQAGLGSFYVYGVGVPRDDGQAVNWYRKAAAQGNVEGQYNMGVMLQAG 102
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ +D A+A + +A+++GHA AA G L L G V
Sbjct: 103 RGLARDPAAAADWYRKAADQGHASAAHNLGGLYLSGNGV 141
>gi|345892243|ref|ZP_08843066.1| hypothetical protein HMPREF1022_01726 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047382|gb|EGW51247.1| hypothetical protein HMPREF1022_01726 [Desulfovibrio sp.
6_1_46AFAA]
Length = 353
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G DAQY LG QSD +A ++ EKA +Q + A L +Y G
Sbjct: 171 AANQGLADAQYSLGWTYLNSKGENQSDTKAVHWFEKAAEQDNLKAQNNLAYMYAEGRGYA 230
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D A+ ++RA+E+G+A A G + +G VP+ K
Sbjct: 231 QDPVKAVQWYNRAAERGYAEAQYNLGFMYEQGRGVPQDYNK 271
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG Q +A + KA +Q P A Y LG +Y G V
Sbjct: 243 AAERGYAEAQYNLGFMYEQGRGVPQDYNKAVEWYRKAAEQNEPAAQYSLGLMYDQGTGVP 302
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
++++ A + A++ G A +LR PE ++ +AAK++R
Sbjct: 303 RNLSEATRWYRLAAKNGDPDA-----KAVLRAQGKPETASRP----AAAAKQSR 347
>gi|160893653|ref|ZP_02074437.1| hypothetical protein CLOL250_01207 [Clostridium sp. L2-50]
gi|156864638|gb|EDO58069.1| Sel1 repeat protein [Clostridium sp. L2-50]
Length = 872
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A +G+ +AQY LG L +E S Q A ++ KA + H A Y+LG +Y G
Sbjct: 662 SAKLGNINAQYALGT-LWLETGSGDSGQ-AVEWLTKAANAEHSAAQYVLGKLYQDGVYFN 719
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT------KLNAKRVSAAKKAR 229
KD+ A+ F A+E G+ AA G LLL G ++P+ + L+A++ + + R
Sbjct: 720 KDMDQAMKWFRSAAELGNEYAAYRMGCLLLLGEEIPKDVEAAVKWLSLSAEKGNPYAQYR 779
Query: 230 ANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
+ L E+ Q EVA ++WLQ+ E+
Sbjct: 780 LGM---LYLKGEEYSPQVEVA--------MKWLQQAAEQ 807
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G+P AQY LG +Y + A ++++A +Q + A Y LG +YL+G+ V
Sbjct: 768 SAEKGNPYAQYRLGMLYLKGEEYSPQVEVAMKWLQQAAEQKNEWAFYQLGKLYLSGEHVT 827
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
K++ +A+ +EKG+ A GS + P
Sbjct: 828 KNVETAVHYLGLCAEKGNQYAQYVLGSYISVAEMFP 863
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G+ A Y +GC L + + + + A ++ + ++ +P A Y LG +YL G+
Sbjct: 732 AAELGNEYAAYRMGCLLLLGEEIPKDVEAAVKWLSLSAEKGNPYAQYRLGMLYLKGEEYS 791
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ A+ +A+E+ + A G L L G V
Sbjct: 792 PQVEVAMKWLQQAAEQKNEWAFYQLGKLYLSGEHV 826
>gi|386835489|ref|YP_006240808.1| hypothetical protein [Pasteurella multocida subsp. multocida str.
3480]
gi|385202194|gb|AFI47049.1| hypothetical protein NT08PM_1947 [Pasteurella multocida subsp.
multocida str. 3480]
Length = 172
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A G+ AQ+ +G R+ E D V+ D QQA + +K+ +Q HP A Y LG +Y
Sbjct: 48 LWLSRAEQGEMSAQFNVG-RMYDEGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSE 106
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
GD + +D A + +++ +G A A G+L G V
Sbjct: 107 GDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGV 146
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY LG + Q +QA+ + ++ Q ALY LGT+Y G+ V+
Sbjct: 88 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGVE 147
Query: 176 KDIASALWCFHRASEKG 192
++ A F +A + G
Sbjct: 148 RNWDRAKMYFKQACKAG 164
>gi|345878174|ref|ZP_08829898.1| soluble lytic murein transglycosylase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344224798|gb|EGV51177.1| soluble lytic murein transglycosylase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 179
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A G+P+AQY + + V ++ A+ ++ A D H + + LG +YL G
Sbjct: 63 LLSPLAEEGNPEAQYRMAIMAQNGLGMVVNELMAYKNMKAAADAGHGMSQHGLGFMYLEG 122
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+CV+K+ A++ F +A+E+G AG+ G L G V
Sbjct: 123 ECVEKNEEKAVFWFRKAAEQGLAGSQATLGMLYKEGRGV 161
>gi|303325650|ref|ZP_07356093.1| TPR repeat protein [Desulfovibrio sp. 3_1_syn3]
gi|302863566|gb|EFL86497.1| TPR repeat protein [Desulfovibrio sp. 3_1_syn3]
Length = 345
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G DAQY LG QSD +A ++ EKA +Q + A L +Y G
Sbjct: 163 AANQGLADAQYSLGWTYLNSKGENQSDTKAVHWFEKAAEQDNLKAQNNLAYMYAEGRGYA 222
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D A+ ++RA+E+G+A A G + +G VP+ K
Sbjct: 223 QDPVKAVQWYNRAAERGYAEAQYNLGFMYEQGRGVPQDYNK 263
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG Q +A + KA +Q P A Y LG +Y G V
Sbjct: 235 AAERGYAEAQYNLGFMYEQGRGVPQDYNKAVEWYRKAAEQNEPAAQYSLGLMYDQGTGVP 294
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
++++ A + A++ G A +LR PE ++ +AAK++R
Sbjct: 295 RNLSEATRWYRLAAKNGDPDA-----KAVLRAQGKPETASRP----AAAAKQSR 339
>gi|296108284|ref|YP_003619985.1| enhanced entry protein EnhC [Legionella pneumophila 2300/99 Alcoy]
gi|295650186|gb|ADG26033.1| enhanced entry protein EnhC [Legionella pneumophila 2300/99 Alcoy]
Length = 1200
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AEYFLESKHAGNKKLGIIWLNKAAENGDPKALTELGRFYVAGQM 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN--AKRVSAAKKARAN 231
V KD A + ++A+ + +A A + G L L Q E + LN AK+ + A A+
Sbjct: 204 VAKDTAKGVELLNKAASEQYAPAMLELGKLALMQNQYDEAIQWLNKAAKQSTEATLELAH 263
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCN 256
+ +PV K F + +A N
Sbjct: 264 IYLQDKSPVYDPKTGFLLVLKAAQN 288
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 495 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 554
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 555 QQALNWLTDSAFKGNKRAQYVLARILRQGIVGPD 588
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 956 SLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1015
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1016 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1055
>gi|239501328|ref|ZP_04660638.1| hypothetical protein AbauAB_03346 [Acinetobacter baumannii AB900]
gi|421677145|ref|ZP_16117038.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
gi|410393423|gb|EKP45776.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
Length = 259
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDY-VQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA P+AQY LG L +N Y V D+ +A + + + DQ + A Y L YL+G+
Sbjct: 102 AAKNNFPEAQYNLG--LMYDNGYYVNKDRSKALEFYKLSSDQGYAKAQYNLANAYLSGNG 159
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTKLNAKRVSAAK 226
VKKDI AL + +A+++ + A ++ G V E K+ K V A+
Sbjct: 160 VKKDINLALELYKKAADQNFSEAQYNLANIYSDGSLVKQDNEKALELYIKVAEKGVPEAQ 219
Query: 227 KARANLESNLMNPVEKAKEQFEVAAQAG 254
A + +N+ + EKAK F+ AA G
Sbjct: 220 NNLAYMYANVYSDYEKAKYWFQKAADNG 247
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ +L +++++A+Y+ EKA P A Y LG +Y G V
Sbjct: 66 AAEKGLPIAQNDLAGMYFKGIGTQKNEEKAYYWYEKAAKNNFPEAQYNLGLMYDNGYYVN 125
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD + AL + +S++G+A A + L G V
Sbjct: 126 KDRSKALEFYKLSSDQGYAKAQYNLANAYLSGNGV 160
>gi|313202401|ref|YP_004041059.1| sel1 domain-containing protein repeat-containing protein
[Methylovorus sp. MP688]
gi|312441717|gb|ADQ85823.1| Sel1 domain protein repeat-containing protein [Methylovorus sp.
MP688]
Length = 251
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY LG + V D +A + KA +Q H + LG VYL GD V
Sbjct: 91 SAEQGFVEAQYALGVIYFSRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVV 150
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+DI AL F A+E+G + A G++ L G VP +
Sbjct: 151 PQDIPQALKWFGLAAEQGDSDAQFNLGNMYLEGEGVPASMV 191
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLG 165
A AA+ + A GD AQY LG + D VQ + Q+A + + +Q A Y LG
Sbjct: 46 AQAAAMYRELAAAGDAKAQYNLGL-MYARGDGVQENPQEAVKWYRMSAEQGFVEAQYALG 104
Query: 166 TVYLTGD-CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSA 224
+Y + D V D A+ + +A+E+GH + + G + LRG VP+ + + A
Sbjct: 105 VIYFSRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLA 164
Query: 225 AKKARANLESNLMN 238
A++ ++ + NL N
Sbjct: 165 AEQGDSDAQFNLGN 178
>gi|338708147|ref|YP_004662348.1| Sel1 domain-containing protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294951|gb|AEI38058.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 611
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQ+++ + + ++ ++AF + +KA DQ +P A +LG +Y G+
Sbjct: 105 AADQGIAAAQFDMSLIYQEGIIFPKNPEKAFEWCQKAADQGYPNAEAVLGDMYYDGEGTP 164
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
K+ A + + +A+++ + A ++ G + +G P+ K AA K +SN
Sbjct: 165 KNSEKAFYWYQKAADQDYPDAKVSLGYMYNKGEGTPKNSEKAFYWYQKAADKGIPEAQSN 224
Query: 236 LMN 238
L N
Sbjct: 225 LGN 227
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G P+A+ LG ++ ++AFY+ +KA DQ +P A LG +Y G+
Sbjct: 141 AADQGYPNAEAVLGDMYYDGEGTPKNSEKAFYWYQKAADQDYPDAKVSLGYMYNKGEGTP 200
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K+ A + + +A++KG A G++ G P+ K
Sbjct: 201 KNSEKAFYWYQKAADKGIPEAQSNLGNMYFIGEGTPKNPEK 241
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G A + L Q+ ++AFY+ +KA D P A + LG +Y G V
Sbjct: 281 AADKGLASAAFYLALMYNNGRGVAQNPEKAFYWYQKAADHNIPEAEFNLGLMYNLGRAVP 340
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD+ A + + +A+E G+ A + G L G++ L K AA + + E+
Sbjct: 341 KDLKKAYFWYQKAAEHGYVSAQVNVGLQYLLGIETNRNLEKAFYWYQKAADQGNEDAETR 400
Query: 236 L 236
Sbjct: 401 F 401
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ +AA+ G +AQ++LG ++++++FY+++KA DQ A + + +Y G
Sbjct: 66 MEEAADQGHAEAQHQLGLMYDRGKGVAKNEKKSFYWMQKAADQGIAAAQFDMSLIYQEGI 125
Query: 173 CVKKDIASAL-WCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
K+ A WC +A+++G+ A G + G P+
Sbjct: 126 IFPKNPEKAFEWC-QKAADQGYPNAEAVLGDMYYDGEGTPK 165
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ PDA+ LG ++ ++AFY+ +KA D+ P A LG +Y G+
Sbjct: 177 AADQDYPDAKVSLGYMYNKGEGTPKNSEKAFYWYQKAADKGIPEAQSNLGNMYFIGEGTP 236
Query: 176 KDIASALWCFHRASEKGH 193
K+ AL+ +A+++G+
Sbjct: 237 KNPEKALYWLKKAADQGN 254
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G P+AQ LG + ++ ++A Y+++KA DQ + A YLLG Y+ +
Sbjct: 213 AADKGIPEAQSNLGNMYFIGEGTPKNPEKALYWLKKAADQGNIIATYLLGKQYM---AIS 269
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLL---RGV-QVPE----CLTKLNAKRVSAAKK 227
+ + W + +A++KG A AA Y +L+ RGV Q PE K + A+
Sbjct: 270 NEKEAVHW-YQKAADKGLASAAF-YLALMYNNGRGVAQNPEKAFYWYQKAADHNIPEAEF 327
Query: 228 ARA---NLESNLMNPVEKAKEQFEVAAQAG-----CNLGLRWLQRIE 266
NL + ++KA ++ AA+ G N+GL++L IE
Sbjct: 328 NLGLMYNLGRAVPKDLKKAYFWYQKAAEHGYVSAQVNVGLQYLLGIE 374
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
Q+ L + +D Q ++AF ++E+A DQ H A + LG +Y G V K+ + +
Sbjct: 42 QFHLAMHYKKNDDNKQDLEKAFRWMEEAADQGHAEAQHQLGLMYDRGKGVAKNEKKSFYW 101
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A+++G A A + G+ P+ K AA + N E+ L
Sbjct: 102 MQKAADQGIAAAQFDMSLIYQEGIIFPKNPEKAFEWCQKAADQGYPNAEAVL 153
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ +G + + + ++ ++AFY+ +KA DQ + A G +Y G
Sbjct: 353 AAEHGYVSAQVNVGLQYLLGIETNRNLEKAFYWYQKAADQGNEDAETRFGYMYQLGYGTP 412
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLL----------------------LRGVQVPEC 213
KD+ A + + +A+++ +A A G L+ +G + EC
Sbjct: 413 KDLEKAKYWYQKAADQDYASGKYALGQLIYDTGKTNPKNLAEAIKWIKQAAYQGNEAAEC 472
Query: 214 LTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQ 263
+R K NLE + A++ +AA CNLGL + Q
Sbjct: 473 FLGALYERGEGVPK---NLEQAIYWLQRSAQQGNALAA---CNLGLIYYQ 516
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+A +I++A Q + A LG +Y G+ V K++ A++ R++++G+A AA G +
Sbjct: 454 EAIKWIKQAAYQGNEAAECFLGALYERGEGVPKNLEQAIYWLQRSAQQGNALAACNLGLI 513
Query: 204 LLRGVQVPECL 214
+G VP+ L
Sbjct: 514 YYQGEGVPKNL 524
>gi|290989409|ref|XP_002677330.1| predicted protein [Naegleria gruberi]
gi|284090937|gb|EFC44586.1| predicted protein [Naegleria gruberi]
Length = 515
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 29/262 (11%)
Query: 20 QSNQHQKRWLHSRNKKAMELIAKGWSALKE--VDRVIDYCELNDRRLIPL---------- 67
Q+NQ + L+S N + +L+A L E +DR ++ +N ++
Sbjct: 249 QANQANHQLLNSLNHYSSKLVAIILKMLSEDPIDRHLEITTINMSQISTFGHDNQVKELK 308
Query: 68 ---LKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDP 122
+T E+ + A+ N +Y L ++K G K+ A +AN G
Sbjct: 309 NQVTETTLESTIIQHTANQENIVTQYNLGMKYIK--GEGCEKSFEKAFEWFEKSANQGYN 366
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
+AQY LG +S ++AF + EK+ +Q H A + LG +Y G+ K+ A
Sbjct: 367 EAQYRLGLMYCFGQGCNESFEKAFEWYEKSANQGHNEAQFRLGLMYYLGNGCKQSFEKAF 426
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK----LNAKRVSAAKKARANLESNLM- 237
+ +++ +G A A +G + L+G + K +A+ NL S +
Sbjct: 427 EWYEKSANQGIAIAQHMFGEMYLQGEGCKQLFEKAFEWFEKSANQGYNEAQFNLGSMYLI 486
Query: 238 -----NPVEKAKEQFEVAAQAG 254
EKA E FE +A G
Sbjct: 487 GEGCDKSFEKAFEWFEKSANQG 508
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACK-AMGAAL--LVDAANMGDPDA 124
E+FE A E A+ + A++ +L L Y++ CK + A +AN G A
Sbjct: 384 ESFEKAFEWYEKSANQGHNEAQF---RLGLMYYLGNGCKQSFEKAFEWYEKSANQGIAIA 440
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
Q+ G Q ++AF + EK+ +Q + A + LG++YL G+ K A
Sbjct: 441 QHMFGEMYLQGEGCKQLFEKAFEWFEKSANQGYNEAQFNLGSMYLIGEGCDKSFEKAFEW 500
Query: 185 FHRASEKGH 193
F +++ +GH
Sbjct: 501 FEKSANQGH 509
>gi|221068950|ref|ZP_03545055.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713973|gb|EED69341.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 542
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
QS A + ++A DQ H A Y LGT+Y G ++ +AL + +A+E+GHA A
Sbjct: 312 QSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINN 371
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G+L G VP+ AA K A+ + NL
Sbjct: 372 VGTLYAEGRGVPQNYATAMQWFRRAADKGDASAQFNL 408
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N R +L L ++ A A AA+ DAQY LG Q
Sbjct: 294 ADGQNHLGRLYLYGLGVE-----QSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQ 348
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ A + +KA +Q H A+ +GT+Y G V ++ A+A+ F RA++KG A A
Sbjct: 349 NYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVPQNYATAMQWFRRAADKGDASA 404
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A +N A+Y LS L+ VP + + A L +A G AQ+ELG R N
Sbjct: 145 AQQNNAVAQYNLSHLYQDGLGVPQSF-STAAQWLEKSAAQGHVTAQFELGQRYLKGNGVA 203
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+ A + +KA DQ H A LG++ G VK D A RA+E+G A A +
Sbjct: 204 VNYMTAADWFKKAADQGHAQAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQNS 263
Query: 200 YGSLLLRGVQVP 211
G + + GV VP
Sbjct: 264 LGRMYMDGVGVP 275
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ GD AQ+ L RL + S QA + A +Q H GA LG +Y G
Sbjct: 396 AADKGDASAQFNL-ARLYADGQGGAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGA 454
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A+ + RA+E+G A A G + +G V
Sbjct: 455 ARDYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGV 490
>gi|269467836|gb|EEZ79582.1| hypothetical protein Sup05_0903 [uncultured SUP05 cluster
bacterium]
Length = 96
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+V+ AN G+ AQYELG + ++ QAF + +K+ DQ + A Y LG Y
Sbjct: 10 VVNLANQGNAKAQYELGLMHELGLGIEKNLNQAFVWYQKSADQNYAKAQYNLGIFYALAK 69
Query: 173 CVKKDIASALWCFHRASEKGHAGAAI 198
V KDI + +A+E G++G ++
Sbjct: 70 SVDKDIEQSKHWIRKANENGYSGGSV 95
>gi|90418710|ref|ZP_01226621.1| conserved hypothetical protein with putative peptidoglycan-binding
domain [Aurantimonas manganoxydans SI85-9A1]
gi|90336790|gb|EAS50495.1| conserved hypothetical protein with putative peptidoglycan-binding
domain [Aurantimonas manganoxydans SI85-9A1]
Length = 1306
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%)
Query: 101 VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
VP +G A L DAA GDP A +E+G RL D A + + ++ A
Sbjct: 1019 VPPIPDGIGNAALTDAAEAGDPKAIFEIGLRLMEGRDSEPKPAVAAEWFASSAERGFAPA 1078
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
Y LGT+Y G+ V++D +A + +A+E+G+ A L GV
Sbjct: 1079 QYSLGTLYEKGNGVERDTIAARDWYLKAAEQGNVRAMHNLAVLFATGV 1126
>gi|357037126|ref|ZP_09098926.1| Sel1 domain protein repeat-containing protein [Desulfotomaculum
gibsoniae DSM 7213]
gi|355361291|gb|EHG09046.1| Sel1 domain protein repeat-containing protein [Desulfotomaculum
gibsoniae DSM 7213]
Length = 874
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%)
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ 144
N HA+Y L +++ L A++ G AQY LG R + +
Sbjct: 653 NVHAQYMLGRIYSDTDSGHVNSEKAVEWLTRASDSGSSMAQYALGKFYRDGTHVAKDIGK 712
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
A KA +Q + A+Y LG +YL G+ V KD+ SA+ ++++ + A A G L
Sbjct: 713 AVELFTKAAEQNNSFAMYQLGKLYLLGEGVPKDVESAVKWLTKSAKLSNQYAQYALGKLY 772
Query: 205 LRGVQVP 211
L G VP
Sbjct: 773 LIGRDVP 779
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 99 YHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVEND--YVQSDQQAFYYIEKAVD 154
Y G K + AA+ L AA +G+ AQY LG R+ + D +V S ++A ++ +A D
Sbjct: 629 YTGTGTEKDIPAAIEYLEKAARLGNVHAQYMLG-RIYSDTDSGHVNS-EKAVEWLTRASD 686
Query: 155 QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
A Y LG Y G V KDI A+ F +A+E+ ++ A G L L G VP
Sbjct: 687 SGSSMAQYALGKFYRDGTHVAKDIGKAVELFTKAAEQNNSFAMYQLGKLYLLGEGVP 743
>gi|148358626|ref|YP_001249833.1| enhanced entry protein EnhC [Legionella pneumophila str. Corby]
gi|148280399|gb|ABQ54487.1| enhanced entry protein EnhC [Legionella pneumophila str. Corby]
Length = 1200
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AEYFLESKHAGNKKLGIIWLNKAAENGDPKALTELGRFYVAGQM 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN--AKRVSAAKKARAN 231
V KD A + ++A+ + +A A + G L L Q E + LN AK+ + A A+
Sbjct: 204 VAKDTAKGVELLNKAASEQYAPAMLELGKLALMQNQYDEAIQWLNKAAKQSTEATLELAH 263
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCN 256
+ +PV K F + +A N
Sbjct: 264 IYLQDKSPVYDPKTGFLLVLKAAQN 288
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 495 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 554
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 555 QQALNWLTDSAFKGNQRAQYVLARILRQGIVGPD 588
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 956 SLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1015
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1016 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1055
>gi|432903884|ref|ZP_20113155.1| hypothetical protein A13Y_01518 [Escherichia coli KTE194]
gi|433038951|ref|ZP_20226554.1| hypothetical protein WIE_02303 [Escherichia coli KTE113]
gi|431434318|gb|ELH15968.1| hypothetical protein A13Y_01518 [Escherichia coli KTE194]
gi|431551858|gb|ELI25824.1| hypothetical protein WIE_02303 [Escherichia coli KTE113]
Length = 378
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +AQ+ LG Q+ +QA + EKA Q P A Y LG +Y G V
Sbjct: 216 AAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVT 275
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLE 233
+ A F +A+EKGH A G + G V + + A ++ ++ A+A E
Sbjct: 276 QSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE 335
Query: 234 SNLMNPVEKAK----EQFEVAAQAGCNLGLR 260
+MN + + + +Q + CN GL+
Sbjct: 336 LGVMNELGQGESIDLKQARHYYERSCNNGLK 366
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ+ LG N Q QQA + EKA +Q A + LG +Y G+ VK
Sbjct: 180 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVK 239
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A F +A+ + A G + G V + + AA+K + + N
Sbjct: 240 QNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQYN 299
Query: 236 L 236
L
Sbjct: 300 L 300
>gi|386638523|ref|YP_006105321.1| hypothetical protein ECABU_c12240 [Escherichia coli ABU 83972]
gi|442603690|ref|ZP_21018559.1| FIG00639943: hypothetical protein [Escherichia coli Nissle 1917]
gi|307553015|gb|ADN45790.1| conserved hypothetical protein [Escherichia coli ABU 83972]
gi|441715593|emb|CCQ04536.1| FIG00639943: hypothetical protein [Escherichia coli Nissle 1917]
Length = 328
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +AQ+ LG Q+ +QA + EKA Q P A Y LG +Y G V
Sbjct: 166 AAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVT 225
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLE 233
+ A F +A+EKGH A G + G V + + A ++ ++ A+A E
Sbjct: 226 QSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE 285
Query: 234 SNLMN--------PVEKAKEQFEVAAQAGCNLGLR 260
+MN +++A+ +E + CN GL+
Sbjct: 286 LGVMNELGQGESIDLKQARHYYERS----CNNGLK 316
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ+ LG N Q QQA + EKA +Q A + LG +Y G+ VK
Sbjct: 130 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVK 189
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A F +A+ + A G + G V + + AA+K + + N
Sbjct: 190 QNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQYN 249
Query: 236 L 236
L
Sbjct: 250 L 250
>gi|189502236|ref|YP_001957953.1| hypothetical protein Aasi_0854 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497677|gb|ACE06224.1| hypothetical protein Aasi_0854 [Candidatus Amoebophilus asiaticus
5a2]
Length = 684
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A GD AQ+ LG + + V+ D ++A + +KA +Q GA + LG +Y G V+
Sbjct: 166 AEQGDARAQFNLGV-MYFNGEGVEKDARKAVEWFQKAAEQGVAGAQFNLGLMYSKGKGVE 224
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+E+GHAGA G + G V + K AA + + + N
Sbjct: 225 KDARKAVEWYEKAAEQGHAGAQFNLGLMYSNGEGVEKDARKELGWYEKAANQGNVDAQFN 284
Query: 236 L 236
L
Sbjct: 285 L 285
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ DAQ+ LG + + + V+ D ++A + +KA +Q + A + LG +Y G+ V
Sbjct: 273 AANQGNVDAQFNLGV-MYAKGEGVEKDARKAVEWYQKAANQGNARAQFNLGVMYAKGEGV 331
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
+KD A+ + +A+ +G+A A G + +G V + K AA + +
Sbjct: 332 EKDARKAVEWYQKAANQGNARAQFNLGVMYSKGEGVEKDARKAVEWYEKAANQGNVEAQF 391
Query: 235 NLM----------NPVEKAKEQFEVAAQAG-----CNLGL 259
NL KA E +E AA+ G NLGL
Sbjct: 392 NLGVMYANGEGVEKDARKAVEWYEKAAEQGDATAQFNLGL 431
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ AQ+ LG + + + V+ D ++A + EKA +Q + A + LG +Y G+ V
Sbjct: 345 AANQGNARAQFNLGV-MYSKGEGVEKDARKAVEWYEKAANQGNVEAQFNLGVMYANGEGV 403
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
+KD A+ + +A+E+G A A G + +G V + K AA + A +
Sbjct: 404 EKDARKAVEWYEKAAEQGDATAQFNLGLMYSKGKGVEKDARKAVEWYQKAANQGNARAQF 463
Query: 235 NLM----------NPVEKAKEQFEVAAQAG-----CNLGL 259
NL KA E +E AA+ G NLG+
Sbjct: 464 NLGVMYSNGEGVEKDARKAVEWYEKAAEQGDATAQFNLGV 503
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ AQ+ LG + + V+ D ++A + EKA +Q A + LG +Y G+ V
Sbjct: 453 AANQGNARAQFNLGV-MYSNGEGVEKDARKAVEWYEKAAEQGDATAQFNLGVMYSNGEGV 511
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
+KD L + +A+E+G A A G + +G+ V + K AA + A+ +
Sbjct: 512 EKDAKKELEWYKKAAEQGDATAQFNLGVMYSKGLGVEKDAKKELEWYKKAAAQGNASAQF 571
Query: 235 NL 236
NL
Sbjct: 572 NL 573
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG + ++A + EKA +Q H GA + LG +Y G+ V+
Sbjct: 201 AAEQGVAGAQFNLGLMYSKGKGVEKDARKAVEWYEKAAEQGHAGAQFNLGLMYSNGEGVE 260
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD L + +A+ +G+ A G + +G V + K AA + A + N
Sbjct: 261 KDARKELGWYEKAANQGNVDAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFN 320
Query: 236 L 236
L
Sbjct: 321 L 321
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ LG + ++A + +KA +Q + A + LG +Y G+ V+
Sbjct: 417 AAEQGDATAQFNLGLMYSKGKGVEKDARKAVEWYQKAANQGNARAQFNLGVMYSNGEGVE 476
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+E+G A A G + G V + K AA++ A + N
Sbjct: 477 KDARKAVEWYEKAAEQGDATAQFNLGVMYSNGEGVEKDAKKELEWYKKAAEQGDATAQFN 536
Query: 236 L 236
L
Sbjct: 537 L 537
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G AQ+ LG + + V+ D ++ + EKA +Q + A + LG +Y G+ V
Sbjct: 237 AAEQGHAGAQFNLGL-MYSNGEGVEKDARKELGWYEKAANQGNVDAQFNLGVMYAKGEGV 295
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
+KD A+ + +A+ +G+A A G + +G V + K AA + A +
Sbjct: 296 EKDARKAVEWYQKAANQGNARAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQGNARAQF 355
Query: 235 NL 236
NL
Sbjct: 356 NL 357
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 116 AANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD AQ+ LG L VE D ++ + +KA Q + A + LG Y G
Sbjct: 525 AAEQGDATAQFNLGVMYSKGLGVEKD----AKKELEWYKKAAAQGNASAQFNLGVRYGEG 580
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V+KD L + +A+E+GH A + G + TK AA+K A+
Sbjct: 581 LGVEKDAKKELEWYEKAAEQGHVKAQHNLAWMYANGEGTAQNYTKAIEWYGKAAEKEDAD 640
Query: 232 LESNLMNPVEKAK 244
+ NL EK +
Sbjct: 641 AQFNLGQMYEKGE 653
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 116 AANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ AQ+ LG R L VE D ++ + EKA +Q H A + L +Y G
Sbjct: 561 AAAQGNASAQFNLGVRYGEGLGVEKD----AKKELEWYEKAAEQGHVKAQHNLAWMYANG 616
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+ ++ A+ + +A+EK A A G + +G V + K AA+K +
Sbjct: 617 EGTAQNYTKAIEWYGKAAEKEDADAQFNLGQMYEKGEGVAKDCAKAAEWYQKAAEKGDLD 676
Query: 232 LESNLMN 238
+ L N
Sbjct: 677 AQERLKN 683
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD AQ+ LG + + V+ D ++ + +KA +Q A + LG +Y G V
Sbjct: 489 AAEQGDATAQFNLGV-MYSNGEGVEKDAKKELEWYKKAAEQGDATAQFNLGVMYSKGLGV 547
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+KD L + +A+ +G+A A G G+ V + K
Sbjct: 548 EKDAKKELEWYKKAAAQGNASAQFNLGVRYGEGLGVEKDAKK 589
>gi|302878679|ref|YP_003847243.1| Sel1 domain-containing protein repeat-containing protein
[Gallionella capsiferriformans ES-2]
gi|302581468|gb|ADL55479.1| Sel1 domain protein repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 406
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G+ Q LG L V V +D+ QA + KA +Q GA Y LG Y G +
Sbjct: 111 AAEQGNKSGQARLGS-LYVLGQGVAADKVQAIQWFRKAAEQGQAGAQYFLGFAYSGGYGL 169
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
KD A++ + +A E+GHA A G + G+ V + L K +AK+ ++
Sbjct: 170 SKDEVQAVYWYRKAVEQGHADAQFNLGVMYASGLGVTKDLEKAMQLYALSAKQGNEPAKN 229
Query: 235 NLMN 238
NL +
Sbjct: 230 NLAD 233
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +AQ+ LG DY + A + KA +Q + LG++Y+ G V
Sbjct: 79 AAEQGNENAQFNLGVLFDNRQDYTE----AVRWYRKAAEQGNKSGQARLGSLYVLGQGVA 134
Query: 176 KDIASALWCFHRASEKGHAGA 196
D A+ F +A+E+G AGA
Sbjct: 135 ADKVQAIQWFRKAAEQGQAGA 155
>gi|187735941|ref|YP_001878053.1| Sel1 domain-containing protein repeat-containing protein
[Akkermansia muciniphila ATCC BAA-835]
gi|187425993|gb|ACD05272.1| Sel1 domain protein repeat-containing protein [Akkermansia
muciniphila ATCC BAA-835]
Length = 380
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G AQ LG Q + +AFY+ KA +Q HP A + LG Y+ G V+
Sbjct: 64 AAELGHVTAQLNLGWAYSNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVE 123
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLL 204
KD A+ + +A+E+GHA A + G +
Sbjct: 124 KDEHQAIGWYKKAAEQGHAVAQLNLGWIY 152
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 80/210 (38%), Gaps = 49/210 (23%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GDP AQY L + ++ ++A Y+ E+A Q H A Y LG Y G V+
Sbjct: 171 AAEQGDPRAQYNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVE 230
Query: 176 KDIASAL-------------------WCFH-----------------RASEKGHAGAAIA 199
D+ AL WC+ +A+E+GH A +
Sbjct: 231 PDLDKALVWYHKSALQGQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTAQLN 290
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN------PVEKAKEQFEVAAQA 253
G L G P K + AA++ A N+ N +E+ +Q E Q
Sbjct: 291 LGWCHLNGKGTPVNREKALKWYLKAAEQGNATAMFNVGNCYAHGYGIEQDDKQAEEWYQK 350
Query: 254 GCNLG-------LRWLQRIEEEEKRLLTES 276
G LR L +E+EK+ +E+
Sbjct: 351 AVRHGNKKAASALRHLASKQEKEKQTDSEA 380
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
GD A ++L ++ Q+AFY ++A + H A LG Y G +D
Sbjct: 32 GDAQALFQLAINYEQGRGVAENQQEAFYCYQQAAELGHVTAQLNLGWAYSNGIGAPQDND 91
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
A + + +A+E+GH A G + G+ V
Sbjct: 92 KAFYWYRKAAEQGHPTAQFDLGFCYVNGLGV 122
>gi|378775463|ref|YP_005177706.1| Sel1-like protein [Pasteurella multocida 36950]
gi|356598011|gb|AET16737.1| Sel1-like protein [Pasteurella multocida 36950]
Length = 172
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A G+ AQ+ +G R+ E D V+ D QQA + +K+ +Q HP A Y LG +Y
Sbjct: 48 LWLSRAEQGEMTAQFNVG-RMYDEGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSE 106
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
GD + +D A + +++ +G A A G+L G V
Sbjct: 107 GDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGV 146
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY LG + Q +QA+ + ++ Q ALY LGT+Y G+ V+
Sbjct: 88 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGVE 147
Query: 176 KDIASALWCFHRASEKG 192
++ A F +A + G
Sbjct: 148 RNWDRAKMYFKQACKAG 164
>gi|156975097|ref|YP_001446004.1| hypothetical protein VIBHAR_02823 [Vibrio harveyi ATCC BAA-1116]
gi|156526691|gb|ABU71777.1| hypothetical protein VIBHAR_02823 [Vibrio harveyi ATCC BAA-1116]
Length = 256
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G P AQY LG +Q D QA Y+ KA Q + Y LG +Y G V +
Sbjct: 2 AEQGLPKAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQ 61
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A++ + +A+E+G A A G + G V + + AA++ A + NL
Sbjct: 62 DDKQAVYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQHNL 121
Query: 237 --MNP-----------VEKAKEQFEVAAQAGCNLGLRWL 262
MN KA EQ AQ+ NLGL +L
Sbjct: 122 GFMNQNGQDYKQAVYWYRKAAEQGLARAQS--NLGLMYL 158
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA GD AQ+ LG + DY +QA Y+ KA +Q A LG +YL G
Sbjct: 106 LHKAAEQGDAIAQHNLGFMNQNGQDY----KQAVYWYRKAAEQGLARAQSNLGLMYLHGQ 161
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP----ECLTKLNAKRVSAAKKA 228
+ +D A++ F +A+++G A A G + L G V + L+ R + K
Sbjct: 162 GLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQDNAQAYMWLSLARHNGFKNT 221
Query: 229 RANLES--NLMNPVE 241
+ N + LM P +
Sbjct: 222 KENFNTLNKLMTPSD 236
>gi|145637541|ref|ZP_01793198.1| hypothetical protein CGSHiHH_04235 [Haemophilus influenzae PittHH]
gi|145269227|gb|EDK09173.1| hypothetical protein CGSHiHH_04235 [Haemophilus influenzae PittHH]
Length = 254
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +AQY LG Q + +A + KA +Q A +LG +Y G VK
Sbjct: 126 AAEQGNAEAQYNLGNMYANGRGVKQDNFEAVKWFRKAAEQGDAEAQLILGAMYGDGRGVK 185
Query: 176 KDIASALWCFHRASEKGHAGAAIAYG--SLLLRGVQVPECLTK 216
+D A+ F +A+++GHA A + G +L +GVQV + L K
Sbjct: 186 QDDFEAVKWFRKAADQGHAKAQVLLGLSYILGKGVQVNKVLAK 228
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q D +A + +A +Q + A Y LG +Y G VK
Sbjct: 90 AAEQGYARAQYNLGVMYDDGRGIKQDDFEAVKWYRQAAEQGNAEAQYNLGNMYANGRGVK 149
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ F +A+E+G A A + G++ G V +
Sbjct: 150 QDNFEAVKWFRKAAEQGDAEAQLILGAMYGDGRGVKQ 186
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ+ LG Q D +A + +A +Q + A Y LG +Y G +K+
Sbjct: 55 AEQGDAIAQFLLGGVYEDGIGVKQDDFEAVKWYRQAAEQGYARAQYNLGVMYDDGRGIKQ 114
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D A+ + +A+E+G+A A G++ G V +
Sbjct: 115 DDFEAVKWYRQAAEQGNAEAQYNLGNMYANGRGVKQ 150
>gi|26247143|ref|NP_753183.1| hypothetical protein c1269 [Escherichia coli CFT073]
gi|227888009|ref|ZP_04005814.1| Sel1 family repeat-containing serine/threonine protein kinase
[Escherichia coli 83972]
gi|300982506|ref|ZP_07176160.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
gi|386628648|ref|YP_006148368.1| hypothetical protein i02_1162 [Escherichia coli str. 'clone D i2']
gi|386633568|ref|YP_006153287.1| hypothetical protein i14_1162 [Escherichia coli str. 'clone D i14']
gi|419915803|ref|ZP_14434149.1| hypothetical protein ECKD1_21452 [Escherichia coli KD1]
gi|432380724|ref|ZP_19623674.1| hypothetical protein WCU_00866 [Escherichia coli KTE15]
gi|432411103|ref|ZP_19653782.1| hypothetical protein WG9_01588 [Escherichia coli KTE39]
gi|432431147|ref|ZP_19673588.1| hypothetical protein A13K_01437 [Escherichia coli KTE187]
gi|432435678|ref|ZP_19678073.1| hypothetical protein A13M_01384 [Escherichia coli KTE188]
gi|432440478|ref|ZP_19682827.1| hypothetical protein A13O_01303 [Escherichia coli KTE189]
gi|432445592|ref|ZP_19687896.1| hypothetical protein A13S_01628 [Escherichia coli KTE191]
gi|432455974|ref|ZP_19698170.1| hypothetical protein A15C_01763 [Escherichia coli KTE201]
gi|432494902|ref|ZP_19736718.1| hypothetical protein A173_02070 [Escherichia coli KTE214]
gi|432503743|ref|ZP_19745477.1| hypothetical protein A17E_00797 [Escherichia coli KTE220]
gi|432526741|ref|ZP_19763843.1| hypothetical protein A17Y_04881 [Escherichia coli KTE230]
gi|432567826|ref|ZP_19804349.1| hypothetical protein A1SE_01403 [Escherichia coli KTE53]
gi|432592153|ref|ZP_19828480.1| hypothetical protein A1SS_01577 [Escherichia coli KTE60]
gi|432606864|ref|ZP_19843055.1| hypothetical protein A1U7_01861 [Escherichia coli KTE67]
gi|432610779|ref|ZP_19846947.1| hypothetical protein A1UG_01133 [Escherichia coli KTE72]
gi|432645537|ref|ZP_19881335.1| hypothetical protein A1W5_01286 [Escherichia coli KTE86]
gi|432654635|ref|ZP_19890352.1| hypothetical protein A1WE_00742 [Escherichia coli KTE93]
gi|432843551|ref|ZP_20076734.1| hypothetical protein A1YS_01468 [Escherichia coli KTE141]
gi|432936923|ref|ZP_20135615.1| hypothetical protein A13C_00030 [Escherichia coli KTE183]
gi|432999249|ref|ZP_20187786.1| hypothetical protein A17K_01587 [Escherichia coli KTE223]
gi|433014192|ref|ZP_20202549.1| hypothetical protein WI5_02023 [Escherichia coli KTE104]
gi|433026251|ref|ZP_20214206.1| hypothetical protein WI9_04421 [Escherichia coli KTE106]
gi|433058438|ref|ZP_20245495.1| hypothetical protein WIM_02214 [Escherichia coli KTE124]
gi|433127978|ref|ZP_20313504.1| hypothetical protein WKE_04481 [Escherichia coli KTE160]
gi|433139626|ref|ZP_20324894.1| hypothetical protein WKM_01913 [Escherichia coli KTE167]
gi|433148496|ref|ZP_20333550.1| hypothetical protein WKQ_01160 [Escherichia coli KTE174]
gi|433191172|ref|ZP_20375242.1| hypothetical protein WGS_04268 [Escherichia coli KTE88]
gi|433201237|ref|ZP_20385085.1| hypothetical protein WGW_04769 [Escherichia coli KTE94]
gi|433210544|ref|ZP_20394194.1| hypothetical protein WI1_04331 [Escherichia coli KTE97]
gi|433212868|ref|ZP_20396468.1| hypothetical protein WI3_02054 [Escherichia coli KTE99]
gi|433327623|ref|ZP_20403903.1| hypothetical protein B185_024045 [Escherichia coli J96]
gi|26107544|gb|AAN79743.1|AE016759_17 Hypothetical protein c1269 [Escherichia coli CFT073]
gi|47600612|emb|CAE55733.1| hypothetical protein [Escherichia coli Nissle 1917]
gi|227835005|gb|EEJ45471.1| Sel1 family repeat-containing serine/threonine protein kinase
[Escherichia coli 83972]
gi|300408738|gb|EFJ92276.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
gi|355419547|gb|AER83744.1| hypothetical protein i02_1162 [Escherichia coli str. 'clone D i2']
gi|355424467|gb|AER88663.1| hypothetical protein i14_1162 [Escherichia coli str. 'clone D i14']
gi|388383034|gb|EIL44845.1| hypothetical protein ECKD1_21452 [Escherichia coli KD1]
gi|430910211|gb|ELC31565.1| hypothetical protein WCU_00866 [Escherichia coli KTE15]
gi|430937025|gb|ELC57288.1| hypothetical protein WG9_01588 [Escherichia coli KTE39]
gi|430954942|gb|ELC73735.1| hypothetical protein A13K_01437 [Escherichia coli KTE187]
gi|430965352|gb|ELC82777.1| hypothetical protein A13M_01384 [Escherichia coli KTE188]
gi|430968543|gb|ELC85769.1| hypothetical protein A13O_01303 [Escherichia coli KTE189]
gi|430974828|gb|ELC91742.1| hypothetical protein A13S_01628 [Escherichia coli KTE191]
gi|430984203|gb|ELD00844.1| hypothetical protein A15C_01763 [Escherichia coli KTE201]
gi|431027507|gb|ELD40570.1| hypothetical protein A173_02070 [Escherichia coli KTE214]
gi|431041058|gb|ELD51590.1| hypothetical protein A17E_00797 [Escherichia coli KTE220]
gi|431046255|gb|ELD56373.1| hypothetical protein A17Y_04881 [Escherichia coli KTE230]
gi|431102351|gb|ELE07175.1| hypothetical protein A1SE_01403 [Escherichia coli KTE53]
gi|431132069|gb|ELE34085.1| hypothetical protein A1SS_01577 [Escherichia coli KTE60]
gi|431139210|gb|ELE41006.1| hypothetical protein A1U7_01861 [Escherichia coli KTE67]
gi|431150324|gb|ELE51379.1| hypothetical protein A1UG_01133 [Escherichia coli KTE72]
gi|431182255|gb|ELE82076.1| hypothetical protein A1W5_01286 [Escherichia coli KTE86]
gi|431195176|gb|ELE94384.1| hypothetical protein A1WE_00742 [Escherichia coli KTE93]
gi|431396431|gb|ELG79909.1| hypothetical protein A1YS_01468 [Escherichia coli KTE141]
gi|431465878|gb|ELH45958.1| hypothetical protein A13C_00030 [Escherichia coli KTE183]
gi|431513018|gb|ELH91105.1| hypothetical protein A17K_01587 [Escherichia coli KTE223]
gi|431528041|gb|ELI04753.1| hypothetical protein WI9_04421 [Escherichia coli KTE106]
gi|431531485|gb|ELI08148.1| hypothetical protein WI5_02023 [Escherichia coli KTE104]
gi|431570354|gb|ELI43269.1| hypothetical protein WIM_02214 [Escherichia coli KTE124]
gi|431638271|gb|ELJ06311.1| hypothetical protein WKE_04481 [Escherichia coli KTE160]
gi|431660843|gb|ELJ27702.1| hypothetical protein WKM_01913 [Escherichia coli KTE167]
gi|431674795|gb|ELJ40946.1| hypothetical protein WKQ_01160 [Escherichia coli KTE174]
gi|431699777|gb|ELJ64772.1| hypothetical protein WGS_04268 [Escherichia coli KTE88]
gi|431713658|gb|ELJ77882.1| hypothetical protein WGW_04769 [Escherichia coli KTE94]
gi|431726866|gb|ELJ90633.1| hypothetical protein WI1_04331 [Escherichia coli KTE97]
gi|431734656|gb|ELJ98035.1| hypothetical protein WI3_02054 [Escherichia coli KTE99]
gi|432344820|gb|ELL39374.1| hypothetical protein B185_024045 [Escherichia coli J96]
Length = 378
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +AQ+ LG Q+ +QA + EKA Q P A Y LG +Y G V
Sbjct: 216 AAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVT 275
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLE 233
+ A F +A+EKGH A G + G V + + A ++ ++ A+A E
Sbjct: 276 QSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE 335
Query: 234 SNLMN--------PVEKAKEQFEVAAQAGCNLGLR 260
+MN +++A+ +E + CN GL+
Sbjct: 336 LGVMNELGQGESIDLKQARHYYERS----CNNGLK 366
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ+ LG N Q QQA + EKA +Q A + LG +Y G+ VK
Sbjct: 180 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVK 239
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A F +A+ + A G + G V + + AA+K + + N
Sbjct: 240 QNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQYN 299
Query: 236 L 236
L
Sbjct: 300 L 300
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A GD +AQY LG + + + + D QQA + EKA DQ P A LG +Y G
Sbjct: 33 LKSAGENGDVEAQYALGL-MYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANG 91
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL--TKLNAKRVSAAKKAR 229
V +D + + +A+ + A G + G+ V + K+ ++ +A R
Sbjct: 92 LGVNQDYQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHAKMWYEKAAAQNDER 151
Query: 230 ANLESNLM----NPVE----KAKEQFEVAA 251
A + ++ N VE +AK +E AA
Sbjct: 152 AQVNLAVLYAKGNGVEQDYRQAKSWYEKAA 181
>gi|350564218|ref|ZP_08933037.1| Sel1 domain protein repeat-containing protein [Thioalkalimicrobium
aerophilum AL3]
gi|349778218|gb|EGZ32577.1| Sel1 domain protein repeat-containing protein [Thioalkalimicrobium
aerophilum AL3]
Length = 176
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD DAQY LG Q DQ+A + KA +Q GA + LG Y G V++
Sbjct: 51 AEKGDADAQYNLGMMYANGLGVRQDDQKAVEWFTKAANQGVAGAQFNLGVAYTNGRGVRQ 110
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
D A+ + +A+ +G AGA G + RGV+ + K
Sbjct: 111 DDQKAVEWYTKAANQGDAGAQFNLGVMYANGRGVRQSDATAK 152
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AAN G AQ+ LG Q DQ+A + KA +Q GA + LG +Y G
Sbjct: 83 FTKAANQGVAGAQFNLGVAYTNGRGVRQDDQKAVEWYTKAANQGDAGAQFNLGVMYANGR 142
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLR 206
V++ A+A F +A + G G Y L R
Sbjct: 143 GVRQSDATAKEWFGKACDNGDQGGCNNYAILNRR 176
>gi|384411621|ref|YP_005620986.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931995|gb|AEH62535.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 526
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ+ LG + Q ++A ++ +KA DQ + A LG Y++G + +
Sbjct: 42 AEAGDAAAQFVLGLAYQKGAGIAQDYEKAVFWWQKAADQDNVSAQRKLGVAYISGQGISQ 101
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A++ F +A+++ A A G L +G VP+ K AA++ A +SNL
Sbjct: 102 DYEKAVFWFDKAADQNDASAQYYLGLLYDQGAGVPKDKVKAIFWYQKAAEQGDAAAQSNL 161
Query: 237 MNP 239
N
Sbjct: 162 GNA 164
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDY 138
AD N A+++L + Y G + + AA G+P +Q+ LG
Sbjct: 330 ADQGNVDAQFYLGSAY--YFGQGVAQDYEKTMFWWQKAAEQGNPKSQFGLGNAYYNGEGV 387
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ ++A ++ +KA DQ + A Y LG Y G +D A++ + +A+++G A A
Sbjct: 388 ARDYEKAVFWYQKAADQGYADAQYNLGDAYYQGQGAAQDYGKAVFWWRKAADQGLAAAQY 447
Query: 199 AYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
A G G + + K AA K A+ + NL
Sbjct: 448 ALGLAYYNGAGIAQDYGKAVFWYQKAANKGYADAQLNL 485
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ DAQ+ LG Q ++ ++ +KA +Q +P + + LG Y G+ V
Sbjct: 329 AADQGNVDAQFYLGSAYYFGQGVAQDYEKTMFWWQKAAEQGNPKSQFGLGNAYYNGEGVA 388
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D A++ + +A+++G+A A G +G + K
Sbjct: 389 RDYEKAVFWYQKAADQGYADAQYNLGDAYYQGQGAAQDYGK 429
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G DAQY LG Q +A ++ KA DQ A Y LG Y G +
Sbjct: 401 AADQGYADAQYNLGDAYYQGQGAAQDYGKAVFWWRKAADQGLAAAQYALGLAYYNGAGIA 460
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A++ + +A+ KG+A A + G L+G V +
Sbjct: 461 QDYGKAVFWYQKAANKGYADAQLNLGVAYLKGQGVVQ 497
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ DAQ+ LG + ++A ++ +KA DQ A Y LG Y G V
Sbjct: 185 AADQGNVDAQFYLGGAYYFGYGVARDYEKAMFWSQKAADQGLAAAQYFLGNAYYNGAGVA 244
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D +++ + +A+++G A A G+ G + + K
Sbjct: 245 QDYGKSVFWYQKAADQGLAAAQYFLGNAYHDGAGIAQDYGK 285
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
DAQ LG + Q ++A ++ +KA DQ + A + LG+ Y G V +D
Sbjct: 299 ADAQLSLGLAYDLGQGIAQDYEKAVFWYQKAADQGNVDAQFYLGSAYYFGQGVAQDYEKT 358
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVE 241
++ + +A+E+G+ + G+ G V K AA + A+ + NL +
Sbjct: 359 MFWWQKAAEQGNPKSQFGLGNAYYNGEGVARDYEKAVFWYQKAADQGYADAQYNLGDAYY 418
Query: 242 KAK 244
+ +
Sbjct: 419 QGQ 421
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 72 KENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCR 131
K F AD ++ A+Y+L L+ + K AA GD AQ LG
Sbjct: 105 KAVFWFDKAADQNDASAQYYLGLLYDQGAGVPKDKVKAIFWYQKAAEQGDAAAQSNLGNA 164
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
R Q ++A ++ +KA DQ + A + LG Y G V +D A++ +A+++
Sbjct: 165 YRDGMGVAQDYEKAAFWWQKAADQGNVDAQFYLGGAYYFGYGVARDYEKAMFWSQKAADQ 224
Query: 192 GHAGAAIAYGSLLLRGVQVPECLTK 216
G A A G+ G V + K
Sbjct: 225 GLAAAQYFLGNAYYNGAGVAQDYGK 249
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ + AQ +LG Q ++A ++ +KA DQ A Y LG +Y G V
Sbjct: 77 AADQDNVSAQRKLGVAYISGQGISQDYEKAVFWFDKAADQNDASAQYYLGLLYDQGAGVP 136
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
KD A++ + +A+E+G A A G+ G+ V + K
Sbjct: 137 KDKVKAIFWYQKAAEQGDAAAQSNLGNAYRDGMGVAQDYEK 177
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDY 138
AD A+Y+L + Y+ G + G ++ AA+ G AQY LG
Sbjct: 222 ADQGLAAAQYFLGNAY--YNGAGVAQDYGKSVFWYQKAADQGLAAAQYFLGNAYHDGAGI 279
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
Q +A ++ +KA DQ A LG Y G + +D A++ + +A+++G+ A
Sbjct: 280 AQDYGKAVFWYQKAADQELADAQLSLGLAYDLGQGIAQDYEKAVFWYQKAADQGNVDAQF 339
Query: 199 AYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNP 239
GS G V + K AA++ + L N
Sbjct: 340 YLGSAYYFGQGVAQDYEKTMFWWQKAAEQGNPKSQFGLGNA 380
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDY 138
AD A+Y L + Y GA + G A+ AA+ G AQY LG
Sbjct: 402 ADQGYADAQYNLGDAY--YQGQGAAQDYGKAVFWWRKAADQGLAAAQYALGLAYYNGAGI 459
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
Q +A ++ +KA ++ + A LG YL G V +D A + +A++KG+
Sbjct: 460 AQDYGKAVFWYQKAANKGYADAQLNLGVAYLKGQGVVQDKGVARFWIQKAADKGN 514
>gi|345863260|ref|ZP_08815472.1| Sel1 domain protein repeat-containing protein [endosymbiont of
Tevnia jerichonana (vent Tica)]
gi|345125721|gb|EGW55589.1| Sel1 domain protein repeat-containing protein [endosymbiont of
Tevnia jerichonana (vent Tica)]
Length = 146
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A G+P+AQY + + V ++ A+ ++ A D H + + LG +YL G
Sbjct: 30 LLSPLAEEGNPEAQYRMAIMAQNGLGMVVNELMAYKNMKAAADAGHGMSQHGLGFMYLEG 89
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+CV+K+ A++ F +A+E+G AG+ G L G V
Sbjct: 90 ECVEKNEEKAVFWFRKAAEQGLAGSQATLGMLYKEGRGV 128
>gi|171057140|ref|YP_001789489.1| Sel1 domain-containing protein [Leptothrix cholodnii SP-6]
gi|170774585|gb|ACB32724.1| Sel1 domain protein repeat-containing protein [Leptothrix cholodnii
SP-6]
Length = 276
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVEN--DYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
AAL AA GD DA + G RL + D + A + K+ D A Y LG++
Sbjct: 126 AALFEQAAQAGDHDAAFNAG-RLYADGRPDLPKDVNAAIKWYTKSADAGFASAQYNLGSL 184
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK--------LNA 219
Y GD V KD + A + RA + GH A + GS+ G+ V L +
Sbjct: 185 YAQGDGVAKDFSMAAQWYQRAVKSGHPKAQLDLGSMYAFGIGVDRDLARGLQLLEAAAQT 244
Query: 220 KRVSAAKKARANLESNLMNPVEK 242
K ++ KA A L P+E+
Sbjct: 245 KELAPKAKAHAALACRDRTPLER 267
>gi|284802111|ref|YP_003413976.1| hypothetical protein LM5578_1866 [Listeria monocytogenes 08-5578]
gi|284995253|ref|YP_003417021.1| hypothetical protein LM5923_1818 [Listeria monocytogenes 08-5923]
gi|284057673|gb|ADB68614.1| hypothetical protein LM5578_1866 [Listeria monocytogenes 08-5578]
gi|284060720|gb|ADB71659.1| hypothetical protein LM5923_1818 [Listeria monocytogenes 08-5923]
Length = 944
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 78 ALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVE 135
+LEA++ +Y + ++ Y G K + AA+ +A +G+ +AQY LG +L +E
Sbjct: 608 SLEAESHEDKLQYRIGQM--LYTGTGTKKDIPAAISYFEKSAKLGNVNAQYLLG-KLWLE 664
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ QA +IEK D + A Y L +Y G V+KD+ AL F ++E+ +
Sbjct: 665 TG-TGNPMQAVAWIEKTADGGNASAQYTLAKLYHDGIYVEKDMQKALKLFTLSAEQKNEY 723
Query: 196 AAIAYGSLLLRGVQVPECLT 215
AA G L LR ++P+ +T
Sbjct: 724 AAYQLGKLYLRNEEIPKDIT 743
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVD-AANMGDPDAQYELGCRLRVENDYVQSD- 142
N +A+Y L KL L+ G M A ++ A+ G+ AQY L +L + YV+ D
Sbjct: 651 NVNAQYLLGKLWLE---TGTGNPMQAVAWIEKTADGGNASAQYTL-AKLYHDGIYVEKDM 706
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
Q+A + +Q + A Y LG +YL + + KDI +A+ C +S+ G+ A A
Sbjct: 707 QKALKLFTLSAEQKNEYAAYQLGKLYLRNEEIPKDITTAVKCLTFSSDLGNQFAQYALAK 766
Query: 203 LLLRGVQVPECLTK 216
L L G V + ++K
Sbjct: 767 LYLAGEDVQKNISK 780
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N +A Y L KL+L+ L ++++G+ AQY L
Sbjct: 713 FTLSAEQKNEYAAYQLGKLYLRNEEIPKDITTAVKCLTFSSDLGNQFAQYALAKLYLAGE 772
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
D ++ +A + +Q + A Y LG +YL + V KD+ +A+ ++E+G+ A
Sbjct: 773 DVQKNISKAIKLFALSAEQKNEYAEYQLGKLYLFVEDVPKDVEAAIRWLTASAEQGNQFA 832
Query: 197 AIAYGSLLLRGVQVP 211
A G L +P
Sbjct: 833 QYALGKLYFFDGDIP 847
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 82 DNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYV 139
+ ++ +A Y L L Y G ++ AL V +AN G+P A YEL R
Sbjct: 532 EKNHKYAEYSLGGLF--YRGQGVLQSYETALDLYVRSANQGNPYADYELAKMYRDGVGTQ 589
Query: 140 QSDQQAFYYIEKAV-------DQLHPGAL-YLLGTVYLTGDCVKKDIASALWCFHRASEK 191
++ ++A Y + A + H L Y +G + TG KKDI +A+ F ++++
Sbjct: 590 KNTEEADRYFKSAFVGFSSLEAESHEDKLQYRIGQMLYTGTGTKKDIPAAISYFEKSAKL 649
Query: 192 GHAGAAIAYGSLLL 205
G+ A G L L
Sbjct: 650 GNVNAQYLLGKLWL 663
>gi|260773002|ref|ZP_05881918.1| hypothetical protein VIB_001464 [Vibrio metschnikovii CIP 69.14]
gi|260612141|gb|EEX37344.1| hypothetical protein VIB_001464 [Vibrio metschnikovii CIP 69.14]
Length = 336
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A +G+P+AQ++L V Q QA+Y+ +A ++ + A+ L YL G
Sbjct: 31 ARLGNPEAQFQLA----VSYQQAQQSDQAYYWFLQAAERGYQPAMTPLANAYLQGLGTST 86
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
D+ AL + +++ G AA+A G L +G +P+ L
Sbjct: 87 DVTQALLWYTKSATLGDVEAALAMGRLYQQGEHLPQSL 124
>gi|332878139|ref|ZP_08445868.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683877|gb|EGJ56745.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 780
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + +A+Y +++ +++ + G L A G+ DAQ +L R Q
Sbjct: 67 AEAGDVNAQYQIAQCYMEGKGVAKSEEKGVEWLTKVAEGGNADAQRQLALCYRDGRGVAQ 126
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
S+++ F++IEK D P L Y GD VKKD+ A + ++S KG+
Sbjct: 127 SNEKYFFWIEKVADGEKPETQLDLAKAYYVGDGVKKDLNKARFWAEKSSAKGN 179
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 12 KSAALGLLQSNQHQKRWLHSRN-------KKAMELIAKGWSALKEVDRVIDYCELNDRRL 64
KS+A G L++ +W + + +K M++ KG E I LN + +
Sbjct: 173 KSSAKGNLEAEYLLAKWAYEASPNSPDALQKLMKVAEKG---NPEAQNAIGQAYLNGKGV 229
Query: 65 IPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDP 122
+ A E E A A + A Y + + + P K A+ AA GD
Sbjct: 230 TKSEEKAIEWLEKA--AAKGSAEALYTMGNFYFYGNSPLIGKFYKKAIEYYSKAAAKGDA 287
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVD-QLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQ +L L QS + AF ++ ++V+ P LG Y TG+ + I A
Sbjct: 288 NAQRQLSVCLYNGIGGTQSYRDAFNWLSRSVNADPTPVTENNLGVCYTTGNGTRASIPQA 347
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ F +ASE G A A GSLLL Q+
Sbjct: 348 MELFQKASEAGDAMAQYNLGSLLLEEGQL 376
>gi|410667118|ref|YP_006919489.1| serine threonine protein phosphatase 5 [Thermacetogenium phaeum DSM
12270]
gi|409104865|gb|AFV10990.1| serine threonine protein phosphatase 5 [Thermacetogenium phaeum DSM
12270]
Length = 591
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A +G+ +AQY LG R+ +E+D + ++A ++ KA D + A Y +G +YLTG+ +
Sbjct: 402 SAKLGNVNAQYMLG-RIYLESDSEHENVEKALQWLGKAADNGNALAQYAMGKLYLTGNHL 460
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+KD A+ +++E+G+ A A G L L G V
Sbjct: 461 EKDAVKAVELLTKSAEQGNQYAQYALGKLYLLGHDV 496
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 106 KAMGAALLVDAANMGDPDAQYELG--CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYL 163
K++ ++ +A N+G +E + +E+D A Y EK+ + A Y+
Sbjct: 356 KSIKNMVIAEALNIGSHHFTFEPDEEQNISIEDD--GDIAAATTYFEKSAKLGNVNAQYM 413
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG-------VQVPECLTK 216
LG +YL D +++ AL +A++ G+A A A G L L G V+ E LTK
Sbjct: 414 LGRIYLESDSEHENVEKALQWLGKAADNGNALAQYAMGKLYLTGNHLEKDAVKAVELLTK 473
>gi|56552865|ref|YP_163704.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56544439|gb|AAV90593.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 336
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L AAN G+ AQ LG D V D+ +A Y+ ++A D+ +P A +LG +Y
Sbjct: 134 LYQQAANQGNAQAQLNLGLMFS-RGDAVSLDKTKALYWYQQAADKGNPQAELILGNMYYN 192
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G+ V D A + +A+ +G+A A + G + G VP K + AA++ A
Sbjct: 193 GETVPLDKTKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDA 252
Query: 231 NLESNLMN 238
E +L N
Sbjct: 253 QAEYSLGN 260
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 38/213 (17%)
Query: 66 PLLKTAKENFELALE---ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDP 122
P KT +E +LAL+ D+SN K+ L+ AAN G
Sbjct: 31 PTAKTPQEELKLALKYAHGDSSNID------------------KSKALTLIQQAANKGFA 72
Query: 123 DAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
A+Y LG + + V +D+ +A Y+ ++AV A LG +Y GD + D + +
Sbjct: 73 PAEYALGT-FYYKGEAVAADKSKALYWYQQAVTHGDADAALALGNMYYNGDSIAPDKSKS 131
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN--- 238
+ + +A+ +G+A A + G + RG V TK AA K E L N
Sbjct: 132 VDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKTKALYWYQQAADKGNPQAELILGNMYY 191
Query: 239 -----PVEKAK--EQFEVAAQAG-----CNLGL 259
P++K K E ++ AA G NLGL
Sbjct: 192 NGETVPLDKTKAFEWYQKAANQGNAAAELNLGL 224
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A+ LG + D V D+ ++ + +KA +Q A Y LG +Y GD V
Sbjct: 210 AANQGNAAAELNLGL-MYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGV 268
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D A AL + +A+ G A A +A G + G V
Sbjct: 269 AVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGV 304
>gi|260753434|ref|YP_003226327.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552797|gb|ACV75743.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 334
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L AAN G+ AQ LG D V D+ +A Y+ ++A D+ +P A +LG +Y
Sbjct: 132 LYQQAANQGNAQAQLNLGLMFS-RGDAVSLDKAKALYWYQQAADKGNPQAELILGNMYYN 190
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G+ V D A + +A+ +G+A A + G + G VP K + AA++ A
Sbjct: 191 GEAVPLDKTKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDA 250
Query: 231 NLESNLMN 238
E +L N
Sbjct: 251 QAEYSLGN 258
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 89/213 (41%), Gaps = 40/213 (18%)
Query: 66 PLLKTAKENFELALE---ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDP 122
P KT +E +LAL+ D+SN K+ L+ AAN G
Sbjct: 31 PTAKTPQEELKLALKYAHGDSSNID------------------KSKALTLIQQAANKGFA 72
Query: 123 DAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
A+Y LG + + V +D+ +A Y+ ++AV A LG +Y GD + D +
Sbjct: 73 PAEYALGT-FYYKGEAVAADKSKALYWYQQAVTHGDADAALALGNMYYNGDSIAPDKSVD 131
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN--- 238
L + +A+ +G+A A + G + RG V K AA K E L N
Sbjct: 132 L--YQQAANQGNAQAQLNLGLMFSRGDAVSLDKAKALYWYQQAADKGNPQAELILGNMYY 189
Query: 239 -----PVEKAK--EQFEVAAQAG-----CNLGL 259
P++K K E ++ AA G NLGL
Sbjct: 190 NGEAVPLDKTKAFEWYQKAANQGNAAAELNLGL 222
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A+ LG + D V D+ ++ + +KA +Q A Y LG +Y GD V
Sbjct: 208 AANQGNAAAELNLGL-MYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGV 266
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D A AL + +A+ G A A +A G + G V
Sbjct: 267 AVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGV 302
>gi|149909665|ref|ZP_01898318.1| hypothetical protein PE36_12787 [Moritella sp. PE36]
gi|149807369|gb|EDM67322.1| hypothetical protein PE36_12787 [Moritella sp. PE36]
Length = 1046
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K AAL AA++G PDA L +D Q Q+A +KA D H GA L
Sbjct: 535 KQKAAALYQKAADLGHPDATCNLAIMYDNGDDIEQDKQKAAALYQKAADLGHSGATLNLA 594
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAA 225
+Y +GD +++D A + +A++ GH+GA + + G + + + K +S
Sbjct: 595 IMYDSGDGIEQDKQKAADLYQKAADLGHSGATLNLAIMYNDGDGIEQNIQ----KSISLF 650
Query: 226 KKA--RANLES----------NLMNPVEKAKEQFEVAAQAG 254
++A N+ES + +KA E F AAQ G
Sbjct: 651 ERAIELGNIESMYALGLIYRNGKVQDYKKAAELFTRAAQKG 691
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K AAL AAN+ P + Y L + Q Q+A +KA D H GA+Y L
Sbjct: 463 KQKAAALYQKAANLDHPGSTYNLAIMYDSSDGIEQDKQKAAALYQKAADLGHLGAMYNLA 522
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+Y GD +++D A + +A++ GH A
Sbjct: 523 IMYDIGDGIEQDKQKAAALYQKAADLGHPDA 553
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K AAL AAN+ P A L + + Q Q+A +KA D HPGA L
Sbjct: 211 KQKAAALYQKAANLDHPGATCNLAIMYDIGDGIEQDKQKAAALYQKAADLDHPGATCNLA 270
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+Y G+ +++D A + +A GH GA
Sbjct: 271 VMYDHGEGIEQDKQKAAALYQKAVNLGHLGA 301
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K AAL AA++ P A L + Q Q+A +KA + HPG+ Y L
Sbjct: 427 KQKAAALYQKAADLDHPGATSNLAIMYDNGDGIEQDKQKAAALYQKAANLDHPGSTYNLA 486
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+Y + D +++D A + +A++ GH GA
Sbjct: 487 IMYDSSDGIEQDKQKAAALYQKAADLGHLGA 517
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDY----VQSDQQAFYYIEKAVDQLHPGAL 161
K AAL AAN+ P A C L V D+ Q Q+A +KA D HPGA
Sbjct: 319 KQKAAALYQKAANLDHPGAT----CNLAVMYDHGEGIEQDKQKAAALYQKAADLDHPGAT 374
Query: 162 YLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
L +Y GD +++D A + +A++ H GA
Sbjct: 375 CNLAIMYDIGDGIEQDKQKAAALYQKAADLDHPGA 409
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K AAL AAN+ P A L + Q Q+A +KA + HPGA L
Sbjct: 175 KQKAAALYQKAANLDHPGATCNLAVMYDHGDGIEQDKQKAAALYQKAANLDHPGATCNLA 234
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+Y GD +++D A + +A++ H GA
Sbjct: 235 IMYDIGDGIEQDKQKAAALYQKAADLDHPGA 265
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K AAL AA++ P A L + Q Q+A +KA D HPGA L
Sbjct: 391 KQKAAALYQKAADLDHPGATCNLAIMYDNGDGIEQDKQKAAALYQKAADLDHPGATSNLA 450
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+Y GD +++D A + +A+ H G+ AI Y S
Sbjct: 451 IMYDNGDGIEQDKQKAAALYQKAANLDHPGSTYNLAIMYDS 491
>gi|430761980|ref|YP_007217837.1| Sel1 domain protein repeat-containing protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011604|gb|AGA34356.1| Sel1 domain protein repeat-containing protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 145
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A G DAQY + + V+ A ++ A +Q H A + LG ++ G
Sbjct: 21 LLSPLAEAGHADAQYRVAIMCQNGLGVVRQPDPAVTWMRAAAEQGHAMAQHGLGFMFFEG 80
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
DCV KD A A+ F +A+E+G AG+ + +G V
Sbjct: 81 DCVDKDPAQAVHWFEKAAEQGLAGSKTTLAMMYAQGTGV 119
>gi|195054669|ref|XP_001994247.1| GH11624 [Drosophila grimshawi]
gi|193896117|gb|EDV94983.1| GH11624 [Drosophila grimshawi]
Length = 821
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 82/195 (42%), Gaps = 17/195 (8%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELG 129
A E F LA A N+ A +L KL+L+ A A+ MGDP Q LG
Sbjct: 357 ALEYFTLAANAGNAIGFA--FLGKLYLEGSEQIKADNETAFKYFSKASEMGDPVGQSGLG 414
Query: 130 CR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
L V D ++ A Y +A DQ LGT+Y TG+ VK D AL F
Sbjct: 415 LMYLKGLGVPKDSIK----ALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDYKLALKYF 470
Query: 186 HRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNP 239
+ A++ GH G AYG +LR K A+R + + +N
Sbjct: 471 NLATQSGHVLAYYNLGVMHAYGMGMLRSCPAAVEFFKNVAERGRWSNRLMHAYSDYKLNR 530
Query: 240 VEKAKEQFEVAAQAG 254
V++A Q+ + A+ G
Sbjct: 531 VDEAFMQYSLMAEVG 545
>gi|417854458|ref|ZP_12499755.1| hypothetical protein AAUPMG_09451 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338217942|gb|EGP03769.1| hypothetical protein AAUPMG_09451 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 172
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A G+ AQ+ +G R+ + D V+ D QQA + +K+ +Q HP A Y LG +Y
Sbjct: 48 LWLSRAEQGEMSAQFNVG-RMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSE 106
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
GD + +D A + +A+ +G A A G+L G
Sbjct: 107 GDGIAQDFKQAYKWYSQAAVQGDARALYNLGTLYANG 143
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY LG + Q +QA+ + +A Q ALY LGT+Y G+ ++
Sbjct: 88 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQAAVQGDARALYNLGTLYANGEGIE 147
Query: 176 KDIASALWCFHRASEKG 192
+D A F +A + G
Sbjct: 148 RDWDRAKMYFKQACKAG 164
>gi|167772195|ref|ZP_02444248.1| hypothetical protein ANACOL_03570 [Anaerotruncus colihominis DSM
17241]
gi|167665636|gb|EDS09766.1| Sel1 repeat protein [Anaerotruncus colihominis DSM 17241]
Length = 922
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELG-CRLRVE 135
L LE + + +Y + + L G +A A+ +G+P AQY+L L
Sbjct: 620 LELEQQSHDDKLQYRIGWMLLHGVGTGKDEAAARGWFERASKLGNPHAQYQLAKMILDAP 679
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ + QA ++ KA + A Y LG +Y G ++KDI A+ F A+E+G++
Sbjct: 680 SSTPEQTAQALEWLTKAAETGQDCAQYALGKIYRDGQGIEKDIQKAVNLFTLAAEQGNSF 739
Query: 196 AAIAYGSLLLRG 207
AA G L L G
Sbjct: 740 AAFTLGKLYLSG 751
>gi|146162219|ref|XP_001471147.1| hypothetical protein TTHERM_00259549 [Tetrahymena thermophila]
gi|146146480|gb|EDK31987.1| hypothetical protein TTHERM_00259549 [Tetrahymena thermophila
SB210]
Length = 964
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 117 ANMGDPDAQYELGC---RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
A++GD AQ +LG R +EN+ Q+ QQAF Y + A +Q A++ G + + G
Sbjct: 584 ADLGDLQAQLQLGVDYYRGNLENNIQQNHQQAFNYFQMAAEQGVAQAMFNTGLLLMNGQG 643
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+KD A F RA E A L L G+ VP+ TK
Sbjct: 644 TQKDGKKAKEYFQRAIELDEKIAYAGLAQLYLIGLDVPQNQTK 686
>gi|51244078|ref|YP_063962.1| TPR repeat-containing protein [Desulfotalea psychrophila LSv54]
gi|50875115|emb|CAG34955.1| related to TPR repeat proteins [Desulfotalea psychrophila LSv54]
Length = 355
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 97 LKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVD 154
+ Y G K + A L +A GD AQY+LG ++ ++AFY++EK+
Sbjct: 88 MYYQGKGTLKDLKKAFTWLKKSAQQGDASAQYQLGIMYYQGKGMIKDPKRAFYWLEKSAQ 147
Query: 155 QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
Q A Y L +Y G+ + L +++ +GH A G + RG P+
Sbjct: 148 QGDGNAQYQLAAMYHNGEGTPRSPIQELSWVEKSARQGHRAAQFRLGVMYYRGEGTPK 205
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%)
Query: 64 LIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPD 123
L+ T+ E+A E N ++ L L+ K + + +A +G
Sbjct: 21 LLLFYSTSSHASEIAQEIQAVNAETQFRLGSLYHKSTADSKDQQKAFSWFQKSARLGHAG 80
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY+L ++ ++AF +++K+ Q A Y LG +Y G + KD A +
Sbjct: 81 AQYQLAVMYYQGKGTLKDLKKAFTWLKKSAQQGDASAQYQLGIMYYQGKGMIKDPKRAFY 140
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
+++++G A ++ G P
Sbjct: 141 WLEKSAQQGDGNAQYQLAAMYHNGEGTPRS 170
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 81 ADNSNTHARYWLSKLHLKYHV-PGACKAMGAALLV--DAANMGDPDAQYELGCRLRVEND 137
A N A+Y L+ + YH G K A +A G AQY+LG
Sbjct: 218 ARQGNAMAQYQLAAM---YHTGKGTLKDAKRAFFWFKKSARQGHRAAQYQLGDMYYRGEG 274
Query: 138 YVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
++ ++AF ++EK+ Q A Y L +Y G KD+ A F +++++GH A
Sbjct: 275 TLKDQERAFSWVEKSARQGDRAAQYQLAVMYYLGKGTAKDLKRAFSWFEKSAKQGHRAA 333
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G AQ+ LG + ++A ++EK+ Q + A Y L +Y TG
Sbjct: 181 SARQGHRAAQFRLGVMYYRGEGTPKDPKRALPWVEKSARQGNAMAQYQLAAMYHTGKGTL 240
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
KD A + F +++ +GH A G + RG
Sbjct: 241 KDAKRAFFWFKKSARQGHRAAQYQLGDMYYRG 272
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G+ AQY+L ++ ++AF++ +K+ Q H A Y LG +Y G+
Sbjct: 217 SARQGNAMAQYQLAAMYHTGKGTLKDAKRAFFWFKKSARQGHRAAQYQLGDMYYRGEGTL 276
Query: 176 KDIASALWCFHRASEKG 192
KD A +++ +G
Sbjct: 277 KDQERAFSWVEKSARQG 293
>gi|406939361|gb|EKD72396.1| hypothetical protein ACD_45C00684G0004 [uncultured bacterium]
Length = 228
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AA AA G+ DAQY LG R + + D +A + +KA Q +P A LG +Y
Sbjct: 99 AAWFERAAQQGNSDAQYSLGVRYMLGQGTARDDGRALDWFQKAAAQGNPYAENQLGFMYA 158
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV-PECLTKLNAKRVSAAKKA 228
G V +D ++ + +A+E G A A G + G+ P+ K A+++ A
Sbjct: 159 AGKSVPQDYTISIQWYQKAAEHGLASAQYNLGLMYANGIGTQPD---KEKARQLFQLAAA 215
Query: 229 RANLESNLMNPVEKAKEQF 247
R P KA EQ+
Sbjct: 216 RG------FEPARKALEQY 228
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G P+ Y+ G R ++ +QA Y A Q + A Y LG +Y TG V +D
Sbjct: 37 GAPEQLYQTGNRYAKGIGVPRNYEQAALYYRSAAHQGYAKAQYSLGYMYRTGHGVPRDYN 96
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRG 207
A F RA+++G++ A + G + G
Sbjct: 97 RAAAWFERAAQQGNSDAQYSLGVRYMLG 124
>gi|392380396|ref|YP_004987553.1| conserved hypothetical protein; putative TPR repeats; putative
Beta-lactamase [Azospirillum brasilense Sp245]
gi|356882926|emb|CCD03945.1| conserved hypothetical protein; putative TPR repeats; putative
Beta-lactamase [Azospirillum brasilense Sp245]
Length = 567
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GDP AQ +G L E V D +A + +A DQ + A+Y +G ++ G V
Sbjct: 352 AAGQGDPQAQLRIGA-LYAEGRGVARDYDRALDWFRRAADQGNSDAVYNIGMLHSLGLGV 410
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A AL + RA+E+G A G++L G VP+
Sbjct: 411 PRDPAGALSWYQRAAEQGSVLAQFRLGAMLASGDGVPQ 448
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ DA Y +G + + A + ++A +Q A + LG + +GD V
Sbjct: 388 AADQGNSDAVYNIGMLHSLGLGVPRDPAGALSWYQRAAEQGSVLAQFRLGAMLASGDGVP 447
Query: 176 KDI-ASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D +ALW +A+E+GH GA + G ++G+ V
Sbjct: 448 QDYPGAALWS-RKAAEQGHVGAMVNIGRFSMQGLGV 482
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G +AQ L + + + +A ++E+A Q P A +G +Y G V
Sbjct: 316 AAELGHREAQKILAQMYFAGSGVPRDEVEAVRWLERAAGQGDPQAQLRIGALYAEGRGVA 375
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+D AL F RA+++G++ A G L G+ VP
Sbjct: 376 RDYDRALDWFRRAADQGNSDAVYNIGMLHSLGLGVP 411
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 59/145 (40%), Gaps = 22/145 (15%)
Query: 39 LIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLH-L 97
L A+G ++ DR +D+ RR AD N+ A Y + LH L
Sbjct: 367 LYAEGRGVARDYDRALDWF----RRA----------------ADQGNSDAVYNIGMLHSL 406
Query: 98 KYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLH 157
VP A + AA G AQ+ LG L + Q A + KA +Q H
Sbjct: 407 GLGVP-RDPAGALSWYQRAAEQGSVLAQFRLGAMLASGDGVPQDYPGAALWSRKAAEQGH 465
Query: 158 PGALYLLGTVYLTGDCVKKDIASAL 182
GA+ +G + G V++D A AL
Sbjct: 466 VGAMVNIGRFSMQGLGVERDTAEAL 490
>gi|440798272|gb|ELR19340.1| Sel1 repeat/Ubox domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 918
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGAC-KAMGAA--LLVDAANMGDPDAQYELG-CRL 132
L A N HA L+ L Y C K +G A L A++ G P A++ L C
Sbjct: 479 LTRSAKQGNKHA---LNSLAWAYQNGEGCEKDIGKAIELYTKASDKGLPVARWNLAWCYH 535
Query: 133 RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
V D +A KA D+ HPGA+++LG TGD + +D+ A+ + +AS
Sbjct: 536 NVVKDL----PKAVETYTKAADEGHPGAMWILGRFLETGDIMGRDLKRAVEYYTKASNAS 591
Query: 193 HAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
HA A + S G V + L K V AA++ E L
Sbjct: 592 HAPATASLASCYFYGKGVEKDLNKAIPLFVQAAEQGNKQAEFRL 635
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ G P A + LG R D + D ++A Y KA + H A L + Y G V
Sbjct: 551 AADEGHPGAMWILG-RFLETGDIMGRDLKRAVEYYTKASNASHAPATASLASCYFYGKGV 609
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+KD+ A+ F +A+E+G+ A G G V
Sbjct: 610 EKDLNKAIPLFVQAAEQGNKQAEFRLGQCYEEGDGV 645
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYEL 128
+ E+F A A NS ++ W K K++ G + ALL +AA++G DA Y+L
Sbjct: 330 SSESFYGAFNASNSR-ESKLW--KEARKHYRKGPQRNENLALLFLEEAADLGSIDAMYKL 386
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
G ++ QQAF ++A H A LG YL G V KD A+
Sbjct: 387 GSFYFKGRGGQKTPQQAFRRWKEASALGHLKATAKLGFCYLNGVGVSKDNGEAI 440
>gi|397668312|ref|YP_006509849.1| enhanced entry protein EnhC [Legionella pneumophila subsp.
pneumophila]
gi|395131723|emb|CCD10016.1| enhanced entry protein EnhC [Legionella pneumophila subsp.
pneumophila]
Length = 1200
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AEYFLESKHAGNKKLGIIWLNKAAENGDPKALTELGRFYVAGQM 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN--AKRVSAAKKARAN 231
V KD A + ++A+ +A A + G L L Q E + LN AK+ + A A+
Sbjct: 204 VAKDTAKGVELLNKAASAQYAPAMLELGKLALMQNQYDEAIQWLNKAAKQSTEATLELAH 263
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCN 256
+ +PV K F + +A N
Sbjct: 264 IYLQDKSPVYDPKTGFLLVLKAAQN 288
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 495 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 554
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 555 QQALNWLTDSAFKGNKRAQYVLARILRQGIVGPD 588
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 956 SLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1015
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1016 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1055
>gi|189219708|ref|YP_001940349.1| TPR repeat protein, SEL1 subfamily [Methylacidiphilum infernorum
V4]
gi|189186566|gb|ACD83751.1| TPR repeat protein, SEL1 subfamily [Methylacidiphilum infernorum
V4]
Length = 271
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQ+ LG R V DYVQ A Y+ KA +Q + A + LG Y G
Sbjct: 104 AAEQGYDAAQWSLGDAYRDGQGVPQDYVQ----AVYWWRKAAEQGYDLAQWSLGDAYRDG 159
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V +D + A++ + +A+E+G+A A + G G VP+ + AA++ A
Sbjct: 160 QGVPQDYSQAVYWWRKAAEQGNAPAQWSLGYAYWHGQGVPQDYAQAVYWYRKAAEQGFAP 219
Query: 232 LESNL 236
+S L
Sbjct: 220 AQSGL 224
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG R Q QA Y+ KA +Q + A + LG Y G V
Sbjct: 140 AAEQGYDLAQWSLGDAYRDGQGVPQDYSQAVYWWRKAAEQGNAPAQWSLGYAYWHGQGVP 199
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A++ + +A+E+G A A G G VP+ + AA++ A+ +
Sbjct: 200 QDYAQAVYWYRKAAEQGFAPAQSGLGGAYWHGQGVPQDYVQAEYWWRKAAEQGNADAKHW 259
Query: 236 L 236
L
Sbjct: 260 L 260
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ LG R Q QA Y+ KA +Q + A + LG Y G V
Sbjct: 68 AAEQGDDLAQWSLGNAYRDGQGVSQDYMQAVYWWRKAAEQGYDAAQWSLGDAYRDGQGVP 127
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ + +A+E+G+ A + G G VP+ ++ AA++ A + +
Sbjct: 128 QDYVQAVYWWRKAAEQGYDLAQWSLGDAYRDGQGVPQDYSQAVYWWRKAAEQGNAPAQWS 187
Query: 236 L 236
L
Sbjct: 188 L 188
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ LG Q Q Y+ KA +Q A + LG Y G V +
Sbjct: 33 AEKGDVQAQCGLGIAYWYGKGVPQDYTQGVYWWRKAAEQGDDLAQWSLGNAYRDGQGVSQ 92
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D A++ + +A+E+G+ A + G G VP+
Sbjct: 93 DYMQAVYWWRKAAEQGYDAAQWSLGDAYRDGQGVPQ 128
>gi|386036468|ref|YP_005956381.1| hypothetical protein KPN2242_19665 [Klebsiella pneumoniae KCTC
2242]
gi|424832307|ref|ZP_18257035.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339763596|gb|AEJ99816.1| hypothetical protein KPN2242_19665 [Klebsiella pneumoniae KCTC
2242]
gi|414709747|emb|CCN31451.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 440
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
++ A GD AQ +LG L E V D ++A + E+A Q + A Y LG +Y G
Sbjct: 50 MLSQAKSGDASAQTQLGI-LYAEGSGVTRDYKKARSWFEQAGKQNYADAEYNLGVMYGNG 108
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
D V +D AL F +A+E GH GA G + +G+
Sbjct: 109 DGVARDNKKALTWFEKAAEHGHIGARYNLGMIYSQGI 145
>gi|237748064|ref|ZP_04578544.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379426|gb|EEO29517.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 1181
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD-CVKKDI 178
G DA Y L + +Q+D A Y+EKA + ALY LGT Y G KD
Sbjct: 726 GFTDAAYHLALLYLASSPPLQNDPLALRYLEKAASANNTNALYKLGTFYFHGQYSATKDR 785
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
A F RA++ GH + IAY +L +G V
Sbjct: 786 KKAAEYFRRAAKLGHKNSQIAYADILQKGKGV 817
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 90 YWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYI 149
++ + K +VP A AA++ ++QY LG L + D Q+ +QA +
Sbjct: 593 FFFGNDNHKKNVPKAVD-----FFSKAADLNHTESQYMLGLILYSKTDVGQNKKQACQWF 647
Query: 150 EKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ 209
EKA HP + Y+LG L G+ D AL A++K + A G L G
Sbjct: 648 EKAASHNHPESQYMLGICVLEGNHTSADKKKALELIRLAADKNVSIAQNKMGYLYETGHI 707
Query: 210 VPECLTK 216
VP+ + K
Sbjct: 708 VPKDMKK 714
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD + G L + +QAFY+ KA ++ P A LG +Y G +
Sbjct: 904 AAEKGDVGSMITTGKMLDKGEGTARDSKQAFYWFSKAAEKGSPEAEVQLGQLYYAGRGIS 963
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
D+ A+ F ++ +G+A A G L L +GV+ E L +
Sbjct: 964 ADMKKAVSLFDHSARQGNALAQYWMGYLCLHGKGVEKNEPLAR 1006
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 75 FELALEADNSNTHARYWLSKLH-LKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR 133
FE A A N A+ L +H HVP A LL A+ G+ AQ +G
Sbjct: 358 FEKA--AKQGNIDAQSALGYMHYFGVHVP-VDYAKAIPLLKQGADKGNSQAQTAMGFAYA 414
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+++Q+AF EKA A + LG + G ++++ L ++++ G+
Sbjct: 415 SGTGIAKNEQKAFELFEKAARNNVRSAQFYLGEMLENGIGTQRNVPEGLAWIEKSAKAGY 474
Query: 194 AGAAIAYGSLLLRG 207
A G LRG
Sbjct: 475 DQAQFTMGINALRG 488
>gi|418532479|ref|ZP_13098382.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371450338|gb|EHN63387.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 437
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-D 172
V+AA GD AQYELG N ++ A ++ A + H + YLLG VY+ G +
Sbjct: 21 VNAAKTGDVGAQYELGKAYLYGNGVEKNADDAMRWLRLAAEHNHAPSQYLLGLVYVLGAE 80
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
VKKD + L H+A+ G+ A G++ L+G V + + A AA++ A
Sbjct: 81 GVKKDPEAGLAYIHQAANAGNLDAQNLLGTIYLKGEAVEKDAARGVAWLERAAQRGSAAA 140
Query: 233 ESNL 236
++ L
Sbjct: 141 QNGL 144
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 39/81 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQY LG +S QA + A +Q A Y LGT+Y G VK
Sbjct: 350 AANQGYAKAQYNLGTLYENGEGVGKSLVQALKWYRLAAEQQDAPAQYALGTLYRDGLGVK 409
Query: 176 KDIASALWCFHRASEKGHAGA 196
K+ A RA+E+G+A A
Sbjct: 410 KNAKQAREWLQRAAEQGYAPA 430
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+++A G+ AQY +G + + Q + +A + A +Q + A Y LGT+Y G+
Sbjct: 311 LNSALKGNVLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGE 370
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV-------QVPECLTKLNAKRVSAA 225
V K + AL + A+E+ A A A G+L G+ Q E L + + + A
Sbjct: 371 GVGKSLVQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNAKQAREWLQRAAEQGYAPA 430
Query: 226 KKARANL 232
KKA A L
Sbjct: 431 KKALAQL 437
>gi|255068260|ref|ZP_05320115.1| TPR repeat protein [Neisseria sicca ATCC 29256]
gi|255047452|gb|EET42916.1| TPR repeat protein [Neisseria sicca ATCC 29256]
Length = 376
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G DAQ LG + V DYVQ A + KA +Q + A Y LG +Y+ G
Sbjct: 212 AAEQGYKDAQNNLGVMYKDGKGVRKDYVQ----AVKWYRKAAEQGNAEAQYNLGGMYVEG 267
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V++D A A+ F RA E+G A A + G + +G+ V + + AA+ A
Sbjct: 268 QGVRQDDAQAVQWFRRAVEQGDANAQYSLGLMYAKGLGVRQDYVQTLQLWHKAARHGVAE 327
Query: 232 LESNL 236
+S L
Sbjct: 328 AQSGL 332
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G+ +AQY LG + VE V Q D QA + +AV+Q A Y LG +Y G V
Sbjct: 248 AAEQGNAEAQYNLGG-MYVEGQGVRQDDAQAVQWFRRAVEQGDANAQYSLGLMYAKGLGV 306
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
++D L +H+A+ G A A G + RGV+ + K
Sbjct: 307 RQDYVQTLQLWHKAARHGVAEAQSGLGWMYYTGRGVRQNSVIAK 350
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G +AQ LG + Q D QA + KAV+Q A Y LG +Y G V+
Sbjct: 140 AADQGYAEAQNNLGAMYKDGKGIRQDDNQAVQWFRKAVEQGVDAAQYNLGLMYYEGRGVR 199
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D AL + +A+E+G+ A G + G V + + AA++ A + N
Sbjct: 200 QDYKQALQWYRKAAEQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYN 259
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
L + + + AQA ++W +R E+
Sbjct: 260 LGGMYVEGQGVRQDDAQA-----VQWFRRAVEQ 287
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG Q D +A + KA + A Y L +Y G V+
Sbjct: 68 AAEQGQAEAQYNLGVMYAEGQGVRQGDAEAVKWYRKAAELGLAEAQYNLAVMYTEGRGVR 127
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A+ + +A+++G+A A G++ G
Sbjct: 128 QDYVEAVRWYRKAADQGYAEAQNNLGAMYKDG 159
>gi|113460299|ref|YP_718359.1| TPR repeat-containing protein [Haemophilus somnus 129PT]
gi|112822342|gb|ABI24431.1| conserved hypothetical protein, with TPR repeat (tetratrico peptide
repeat) [Haemophilus somnus 129PT]
Length = 181
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A GD +AQ+ LG + Q+DQQA Y+ KA +Q + A LG +Y G
Sbjct: 47 LFKQLAEQGDANAQHNLGLMYEYGDGITQNDQQAVYWYTKAAEQGYANAQNNLGLMYTDG 106
Query: 172 D-CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ ++ A++ + +A+E+G+A A G + G V ++K
Sbjct: 107 GKGITQNYKQAVYWYTKAAEQGYANAQYNLGVMYANGQGVQRNVSK 152
>gi|295104276|emb|CBL01820.1| FOG: TPR repeat, SEL1 subfamily [Faecalibacterium prausnitzii
SL3/3]
Length = 734
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 116 AANMGDPDAQYELGCRLRVE----NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ DAQ + G L + ND Q Q+ + KA +Q HP Y+L +YL G
Sbjct: 312 AAKQGNADAQVKYGLTLANDDADWNDPAQ--QEGIKWFRKAAEQGHPAGQYVLAGIYLNG 369
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V+KD A+ + +++E+ A A G+ L G+ V E
Sbjct: 370 YGVEKDEKKAIEWYKKSAEQDFAAAQYDLGACYLNGLGVEE 410
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 124 AQYELG-CRLR---VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
AQY+LG C L VE D +++A Y+++KA +Q + A +LG Y G +KD
Sbjct: 394 AQYDLGACYLNGLGVEED----EKRALYWVQKAAEQDYADAQVVLGNFYSEGIGAEKDER 449
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN- 238
A F +A+E+G A A G G+ V E +K AA++ A+ ++ L
Sbjct: 450 KAFEWFKKAAEQGKAEAQFFLGCSYFAGIGVEEDKSKAMEWLEKAAEQGNADAQNKLGEY 509
Query: 239 ------PVEKAKEQFEVAAQAGCNLGLRWLQR 264
KA E F+ AA+ G R L +
Sbjct: 510 YIGVGVETRKAFELFQKAAENGSKEAQRNLGK 541
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 75 FELALEA-DNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR 133
FEL +A +N + A+ L K ++K A AA GD +AQY L
Sbjct: 521 FELFQKAAENGSKEAQRNLGKCYMKGLGVNKLPAEAVKYYKKAAEQGDAEAQYLFATCLF 580
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ N Q+ +QA Y +K+ Q + A+ LG Y G V KD AL F ASE H
Sbjct: 581 IGNAVTQNVKQAVEYYQKSAQQEYMKAINDLGVCYARGIGVPKDGKEALAHFGAASEGDH 640
Query: 194 A 194
Sbjct: 641 G 641
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 112 LLVDAANMGDPDAQYELG-CRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYL 169
L ++A G +AQ LG C E V+ D +AF +++KA +Q A ++G +Y
Sbjct: 236 LFYNSAIQGYANAQSNLGECYYNGEG--VEQDHAEAFKWMKKAAEQGDADAQSVVGDMYS 293
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
GD V++D A F+ A+++G+A A + YG L
Sbjct: 294 DGDGVQQDEEEAKKWFYLAAKQGNADAQVKYGLTL 328
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQ LG R + ++A + K+ Q HP A L Y TG V+
Sbjct: 168 AAEQGNADAQNRLGVRYDRGEGVSKDVKEAAKWYAKSAAQGHPKAQCNLALDYKTGKGVE 227
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES- 234
KD+ A+ F+ ++ +G+A A G G V + + AA++ A+ +S
Sbjct: 228 KDLKKAVELFYNSAIQGYANAQSNLGECYYNGEGVEQDHAEAFKWMKKAAEQGDADAQSV 287
Query: 235 ---------NLMNPVEKAKEQFEVAAQAG 254
+ E+AK+ F +AA+ G
Sbjct: 288 VGDMYSDGDGVQQDEEEAKKWFYLAAKQG 316
>gi|34495498|ref|NP_899713.1| hypothetical protein CV_0043 [Chromobacterium violaceum ATCC 12472]
gi|34101354|gb|AAQ57723.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 221
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ +LG + + Q D+ A Y+ E+A Q GA YL+ ++Y G VK
Sbjct: 116 AARQGYLPAQIDLGTQYFLGRGAPQDDRLAAYWYEEAAKQGDVGAQYLIASMYEHGQGVK 175
Query: 176 KDIASALWCFHRASEKGHAGA 196
+DI +A+ + RA +G AGA
Sbjct: 176 RDIPAAIRWYARAGAQGDAGA 196
>gi|23004703|ref|ZP_00047899.1| COG0790: FOG: TPR repeat, SEL1 subfamily [Magnetospirillum
magnetotacticum MS-1]
Length = 231
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G + L AA G+P A Y LG +++ + A K + P A Y LG +Y
Sbjct: 44 GRSWLEQAARKGEPTASYNLGL-MQLATGKPEDLTAAVANFRKGAEAEIPAAQYALGVLY 102
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
L G V +D A F RA++ G GA + + L G VP+
Sbjct: 103 LQGKGVARDTTQAAQWFRRAADNGDLGAEVEFAIRLFNGDGVPK 146
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 122 PDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
P AQY LG L ++ V D QA + +A D GA GD V KD A
Sbjct: 92 PAAQYALGV-LYLQGKGVARDTTQAAQWFRRAADNGDLGAEVEFAIRLFNGDGVPKDEAR 150
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A F A+++G+A A L + G VP+ L +
Sbjct: 151 AARYFLHAAQRGNAIAQNRIAKLYVAGRGVPKNLVE 186
>gi|372279955|ref|ZP_09515991.1| Sel1 domain-containing protein [Oceanicola sp. S124]
Length = 246
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
+A A L DAA+ G+ AQY+LG L + +A ++ A Q + A Y LG
Sbjct: 83 RARAAELYGDAADQGNAWAQYKLGGMLLTGDGVAPLPSRAVELLDAAGGQGNIWANYQLG 142
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
YL G+ + +D+ A + RA++ +A A + G + G+ VPE LT
Sbjct: 143 DAYLQGESIPQDLTRAKFYLERAAKLNNAWALLRLGEMYRDGLGVPESLT 192
>gi|384412134|ref|YP_005621499.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932508|gb|AEH63048.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 264
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L AAN G+ AQ LG D V D+ +A Y+ ++A D+ +P A +LG +Y
Sbjct: 134 LYQQAANQGNAQAQLNLGLMFS-RGDAVSLDKAKALYWYQQAADKGNPQAELILGNMYYN 192
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
GD V D A AL + +A+ G A A +A G + G V
Sbjct: 193 GDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGV 232
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 66 PLLKTAKENFELALE---ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDP 122
P KT +E +LAL+ D+SN K+ L+ AAN G
Sbjct: 31 PTAKTPQEELKLALKYAHGDSSNID------------------KSKALTLIQQAANKGFA 72
Query: 123 DAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
A+Y LG + + V +D+ +A Y+ ++AV A LG +Y GD + D + +
Sbjct: 73 PAEYALGT-FYYKGEAVAADKSKALYWYQQAVTHGDADAALALGNMYYNGDSIAPDKSKS 131
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + +A+ +G+A A + G + RG V
Sbjct: 132 VDLYQQAANQGNAQAQLNLGLMFSRGDAV 160
>gi|333913037|ref|YP_004486769.1| Sel1 domain-containing protein repeat-containing protein [Delftia
sp. Cs1-4]
gi|333743237|gb|AEF88414.1| Sel1 domain protein repeat-containing protein [Delftia sp. Cs1-4]
Length = 420
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG L + QA + +++ +Q Y LG +Y TG V
Sbjct: 201 AAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRSAEQGEAAGQYSLGVMYATGRGVA 260
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D+A AL F A+ +GHA A G L G V + + AA++ A +SN
Sbjct: 261 EDVAQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDRDMAQAAHWLEKAAEQGNAAAQSN 320
Query: 236 L 236
L
Sbjct: 321 L 321
>gi|237748455|ref|ZP_04578935.1| Sel1 domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229379817|gb|EEO29908.1| Sel1 domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 399
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA +G P+AQY LG R + D ++ D++ A + +KA +Q A Y LG +Y G +
Sbjct: 75 AAEIGLPEAQYNLG-RAYFDGDGLEVDRKAAIEWYKKAAEQGFAQAQYNLGVIYQNGLGI 133
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
K+D SA+ + RA+ +G A G L + G V
Sbjct: 134 KQDFDSAVQWYERAANQGFVLAQYNLGMLYITGAGV 169
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG + Q A + E+A +Q A Y LG +Y+TG V
Sbjct: 111 AAEQGFAQAQYNLGVIYQNGLGIKQDFDSAVQWYERAANQGFVLAQYNLGMLYITGAGVG 170
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV----PECL 214
K+ + +A+E G+ A G++ G+ V PE +
Sbjct: 171 KNPKRGILWLRKAAEGGYGQAQHNLGTVYYEGIGVRKNYPEAV 213
>gi|417840657|ref|ZP_12486767.1| Hypothetical protein GG9_0024 [Haemophilus haemolyticus M19501]
gi|341951166|gb|EGT77745.1| Hypothetical protein GG9_0024 [Haemophilus haemolyticus M19501]
Length = 216
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
GDP AQ LG ++ ++ + D +A + KA DQ L LG +Y G+ V+KD
Sbjct: 58 GDPTAQILLG-QMYYNGEFFKQDYVEAAKWYRKAADQGAKFGLLFLGEMYENGEGVEKDY 116
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
A A+ + +A+E+G AG +A GS+ G V
Sbjct: 117 AEAVKLYRKAAEQGSAGGQMALGSMYRFGKGV 148
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
VE DY + A KA +Q G LG++Y G V+KD A A+ + +++E+G+
Sbjct: 112 VEKDYAE----AVKLYRKAAEQGSAGGQMALGSMYRFGKGVEKDYAEAIKLYRKSAEQGN 167
Query: 194 AGAAIAYGSLLLRGVQVPE 212
A G + GV V +
Sbjct: 168 FTALFFLGEMYANGVGVKQ 186
>gi|445412297|ref|ZP_21433166.1| Sel1 repeat protein [Acinetobacter sp. WC-743]
gi|444767359|gb|ELW91608.1| Sel1 repeat protein [Acinetobacter sp. WC-743]
Length = 282
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 92 LSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEK 151
+ ++L H K + + AA G+ DAQY LG + + Q QA+ + K
Sbjct: 170 IGNMYLHGHGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYQWFLK 229
Query: 152 AVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
A +Q GA Y LG +Y G V KD++ A F ++++ AG ++AY LL
Sbjct: 230 AANQGESGAQYHLGKIYKDGLGVNKDLSLAKNWFEKSAQ---AGNSLAYDELL 279
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALY 162
A + + AAN G A+ +G V D +++ Q +YI KA +Q A Y
Sbjct: 149 AQASEYYLKAANAGYSAAENNIGNMYLHGHGVSQDKLKASQ---WYI-KAAEQGEVDAQY 204
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
LG +Y GD +K+D + A F +A+ +G +GA G + G+ V + L+
Sbjct: 205 NLGLMYFLGDGIKQDYSQAYQWFLKAANQGESGAQYHLGKIYKDGLGVNKDLS 257
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 20/164 (12%)
Query: 117 ANMGDPDAQYELGCRLR-VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A GDP+AQY +G D + +AF + E + D+ + A Y L + + +K
Sbjct: 50 AEKGDPEAQYNMGVLFTDGYKDLKPNIIEAFKWYELSADKGYAKAKYNLAILLSSDSGIK 109
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
D A A F A+ G + G+ G+ V E + + + AA + E+N
Sbjct: 110 NDYAQAKKLFEDAAALGDVPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENN 169
Query: 236 LMNP-----------------VEKAKEQFEVAAQAGCNLGLRWL 262
+ N KA EQ EV AQ NLGL +
Sbjct: 170 IGNMYLHGHGVSQDKLKASQWYIKAAEQGEVDAQ--YNLGLMYF 211
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 112 LLVDAANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L DAA +GD + ELG + V+ +Y Q+ + YY+ KA + + A +G +
Sbjct: 118 LFEDAAALGDVPSLNELGNFYKDGIGVQENYAQASE---YYL-KAANAGYSAAENNIGNM 173
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKK 227
YL G V +D A + +A+E+G A G + G + + ++ + AA +
Sbjct: 174 YLHGHGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYQWFLKAANQ 233
Query: 228 ARANLESNLMNPVEK----------AKEQFEVAAQAGCNL 257
+ + +L + AK FE +AQAG +L
Sbjct: 234 GESGAQYHLGKIYKDGLGVNKDLSLAKNWFEKSAQAGNSL 273
>gi|189502235|ref|YP_001957952.1| hypothetical protein Aasi_0852 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497676|gb|ACE06223.1| hypothetical protein Aasi_0852 [Candidatus Amoebophilus asiaticus
5a2]
Length = 789
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ AQ+ LG R + +++A + EKA +Q H GA LG +Y G V
Sbjct: 584 AADQGNAKAQFYLGVRYENGRGVAKDEKKAVEWYEKAAEQGHTGAQNNLGDMYENGKGVA 643
Query: 176 KDIASALWCFHRASEKGHA 194
KD A+ F + + +GHA
Sbjct: 644 KDYVKAVEWFEKVANQGHA 662
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQY LGC V++D++A + +KA +Q H A LG +Y G +
Sbjct: 512 AADQGYAPAQYSLGCMYANVQRVVKNDKKAIEWYKKAANQRHAEAQSNLGIMYANGRGIA 571
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+++G+A A G G V + K AA++ ++N
Sbjct: 572 KDEKKAVKWYKKAADQGNAKAQFYLGVRYENGRGVAKDEKKAVEWYEKAAEQGHTGAQNN 631
Query: 236 LMNPVE----------KAKEQFEVAAQAGCNLGLRWLQRI 265
L + E KA E FE A G L L R+
Sbjct: 632 LGDMYENGKGVAKDYVKAVEWFEKVANQGHALAQYNLARM 671
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AAN G DAQ ++G + V DY+ +A + +KA +Q + A Y LG +Y G
Sbjct: 368 AANQGHADAQLKVGAKYFNGEGVAQDYI----KAVEWFQKAANQGNLDAQYNLGVMYGNG 423
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V+KD L + RA+ KG A A G + G V + K AA + A+
Sbjct: 424 KGVEKDARKELEWYERAARKGDASAQYNLGQIYANGQGVAKDYVKAIEWYEKAANQGDAS 483
Query: 232 LESNL 236
+ NL
Sbjct: 484 AQFNL 488
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 30/241 (12%)
Query: 59 LNDRRLIPLLKTAKENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAALL 113
++D + L AK AL ++N + HA+Y + ++ K G A A
Sbjct: 270 VSDSVIDKLFSQAKRGDFAALSKLLNLSENHHAHAQYKVGVMYEK----GQGVAKDARNA 325
Query: 114 VD----AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
V+ AAN G AQ+ELG + +A + EKA +Q H A +G Y
Sbjct: 326 VEWYQKAANQGHARAQFELGMMYDYGKGVEKDTSKAIEWYEKAANQGHADAQLKVGAKYF 385
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
G+ V +D A+ F +A+ +G+ A G + G V + K AA+K
Sbjct: 386 NGEGVAQDYIKAVEWFQKAANQGNLDAQYNLGVMYGNGKGVEKDARKELEWYERAARKGD 445
Query: 230 ANLESNL----------MNPVEKAKEQFEVAAQAG-----CNLGLRWLQ--RIEEEEKRL 272
A+ + NL KA E +E AA G NLG+ + + +E++EK+
Sbjct: 446 ASAQYNLGQIYANGQGVAKDYVKAIEWYEKAANQGDASAQFNLGVMYGKGRGVEKDEKKA 505
Query: 273 L 273
+
Sbjct: 506 V 506
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 14/179 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN +AQ LG + +++A + +KA DQ + A + LG Y G V
Sbjct: 548 AANQRHAEAQSNLGIMYANGRGIAKDEKKAVKWYKKAADQGNAKAQFYLGVRYENGRGVA 607
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+E+GH GA G + G V + K A + A + N
Sbjct: 608 KDEKKAVEWYEKAAEQGHTGAQNNLGDMYENGKGVAKDYVKAVEWFEKVANQGHALAQYN 667
Query: 236 L----------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE----EKRLLTESSRIE 280
L + ++A + +E +A G N +L R+ EK LL S I+
Sbjct: 668 LARMYDYGQGVVQNYQEAVKWYEKSAGQGNNYAKAYLGRMYYHGFGVEKNLLQASKLIQ 726
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD AQ+ LG + +++A + +KA DQ + A Y LG +Y V
Sbjct: 476 AANQGDASAQFNLGVMYGKGRGVEKDEKKAVEWYKKAADQGYAPAQYSLGCMYANVQRVV 535
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
K+ A+ + +A+ + HA A G + G
Sbjct: 536 KNDKKAIEWYKKAANQRHAEAQSNLGIMYANG 567
>gi|307610058|emb|CBW99593.1| hypothetical protein LPW_13631 [Legionella pneumophila 130b]
Length = 376
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD +Y LG + V +D +A FY+ +A + H A L YL G V
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGVSADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
D A + + A+EKG A G LLL G V + + +A +
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQG------ 299
Query: 235 NLMNPVEKAKEQFEVAAQAGCNLGL----RWLQ-----RIEEEEKRL------LTESSRI 279
NPV +AK + A G N L WL+ + EE K+L LTE ++
Sbjct: 300 ---NPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSLEAKLTEQEKL 356
Query: 280 E 280
E
Sbjct: 357 E 357
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+ AA G+P AQ +G + SD +AF + +KA +Q + A LG Y+ G
Sbjct: 112 MKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFIWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 174 VKKDIASALWCFHRASEKG 192
KD+ A + +A+E+G
Sbjct: 172 TPKDVKKAFEWYQKAAEQG 190
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ + AQ LG Q +AF + KA +Q +P A +G +Y TGD V
Sbjct: 78 AADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVA 137
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A F +A+E+G++ A + G + G P+ + K
Sbjct: 138 ASDDKAFIWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A++ + +A+ +L+ +LK + A A AA G P+AQ +LG L +
Sbjct: 224 ANHGHVNAQTYLAYYYLKGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDK 283
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
QQA Y+ K+ Q +P LG +YL G V K + A A+E
Sbjct: 284 DYQQAAYWFGKSAHQGNPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAE 333
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA G+ +A Y LG + + ++A + +KA D+ + A LG +Y TG
Sbjct: 39 LMQAAKEGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGK 98
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK----KA 228
V +D A A + +A+E+G+ A G + G V K AA+ KA
Sbjct: 99 GVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFIWFKKAAEQGYSKA 158
Query: 229 RANLESNLM------NPVEKAKEQFEVAAQAGCNLG 258
+ NL M V+KA E ++ AA+ G G
Sbjct: 159 QVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG 194
>gi|407015668|gb|EKE29510.1| hypothetical protein ACD_2C00158G0003 [uncultured bacterium (gcode
4)]
Length = 352
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
ADN N+ A Y ++L+ G K AL L +A+ + DAQ++LG ++ E
Sbjct: 158 ADNGNSMASYSAGMMYLE--GLGVEKDTSKALKYLKASADKNNVDAQFQLG-KMYTEGLD 214
Query: 139 VQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
V+ D+ FY+I KA P + L +Y G K+I A+ +ASEKG + A+
Sbjct: 215 VEKDENDGFYWIRKASKHGIPSVDFYLSNMYKEGIGTAKNIPEAIVFLKKASEKGLSSAS 274
Query: 198 IAYGSLLLRGVQVPECLTK 216
G++ G V + L +
Sbjct: 275 YQLGAMYGNGADVKQDLIE 293
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 113 LVDAANMGDPDAQYELG----CRLRVENDYVQSDQQAFYYIEKAV-DQLHPGALYLLGTV 167
DAA G A+ +LG + E+DY + A Y+ ++A D LH A Y LG +
Sbjct: 44 FTDAAENGSMGAELQLGYIYNGFMPTEDDY----KNAVYWFDRAASDGLHA-AEYELGML 98
Query: 168 YLTGDCVKKDIASALWCFHRAS 189
Y G VKKDI A+ F RAS
Sbjct: 99 YYKGHGVKKDIGRAVRLFRRAS 120
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 88 ARYWLSKLHLKYHVPGACKAMGAAL-LVDAANMGDP--DAQYELGCRLRVENDYVQSD-Q 143
A Y L L+ K H G K +G A+ L A++ D DA Y LG D V+ D +
Sbjct: 91 AEYELGMLYYKGH--GVKKDIGRAVRLFRRASVDDDIHDADYLLGTIYLQGADEVRQDFR 148
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+A + + D + A Y G +YL G V+KD + AL +++K + A G +
Sbjct: 149 EAARWFRRGADNGNSMASYSAGMMYLEGLGVEKDTSKALKYLKASADKNNVDAQFQLGKM 208
Query: 204 LLRGVQV 210
G+ V
Sbjct: 209 YTEGLDV 215
>gi|427401563|ref|ZP_18892635.1| hypothetical protein HMPREF9710_02231 [Massilia timonae CCUG 45783]
gi|425719672|gb|EKU82604.1| hypothetical protein HMPREF9710_02231 [Massilia timonae CCUG 45783]
Length = 207
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+PDAQ+ LG + + +QAF + KA +Q A Y++G +Y TG+ V +
Sbjct: 49 AKAGNPDAQHLLGLMYYMGRGVTRDYKQAFAWHLKAAEQGKADAQYVVGAMYYTGNAVPQ 108
Query: 177 DIASALWCFHRASEKGHAGAAIAYG 201
D A+ F +A+E+G+ A A G
Sbjct: 109 DQKHAVGWFRKAAEQGNPDAQHALG 133
>gi|258514777|ref|YP_003190999.1| Sel1 domain-containing protein repeat-containing protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257778482|gb|ACV62376.1| Sel1 domain protein repeat-containing protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 890
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 68 LKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
+K A E FE + A N +A+Y L K++L L AA+ G+ AQ
Sbjct: 654 VKAAIEYFEKS--ARLGNVYAQYMLGKVYLDEDGGHRNPEKAVLWLTRAADNGNNLAQLA 711
Query: 128 LGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
LG +L + ++V+ D +A KA +Q + A+Y LG +YL G+ + KD+ +AL
Sbjct: 712 LG-KLYRDGEHVEKDVAKAVELFTKAAEQNNSFAMYQLGKLYLLGEDIPKDVEAALRWLI 770
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVP 211
++E+ + A G L L G VP
Sbjct: 771 MSAEQNNQYAQYTLGKLYLMGRDVP 795
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 71 AKENFELA------LEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDP 122
A+ NFE A LE + + +Y L ++ Y G K + AA+ +A +G+
Sbjct: 613 AELNFEEAFYVFKQLEEKSHDDKLQYRLGQM--LYTGTGTEKDVKAAIEYFEKSARLGNV 670
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
AQY LG E+ ++ ++A ++ +A D + A LG +Y G+ V+KD+A A+
Sbjct: 671 YAQYMLGKVYLDEDGGHRNPEKAVLWLTRAADNGNNLAQLALGKLYRDGEHVEKDVAKAV 730
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
F +A+E+ ++ A G L L G +P
Sbjct: 731 ELFTKAAEQNNSFAMYQLGKLYLLGEDIP 759
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
ADN N A+ L KL+ A L AA + A Y+LG + D +
Sbjct: 701 ADNGNNLAQLALGKLYRDGEHVEKDVAKAVELFTKAAEQNNSFAMYQLGKLYLLGEDIPK 760
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A ++ + +Q + A Y LG +YL G V +D +A+ F ++E+G+
Sbjct: 761 DVEAALRWLIMSAEQNNQYAQYTLGKLYLMGRDVPRDREAAMRWFTLSAEQGN 813
>gi|54298628|ref|YP_124997.1| enhanced entry protein EnhC [Legionella pneumophila str. Paris]
gi|53752413|emb|CAH13845.1| enhanced entry protein EnhC [Legionella pneumophila str. Paris]
Length = 1200
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AEYFLESKHAGNKKLGIIWLNKAAENGDPKALTELGRFYVAGQM 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN--AKRVSAAKKARAN 231
V KD + + ++A+ + +A A + G L L Q E + LN AK+ + A A+
Sbjct: 204 VAKDTSKGVELLNKAASEQYAPAMLELGKLALMQNQYDEAIQWLNKAAKQSTEATLELAH 263
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCN 256
+ +PV K F + +A N
Sbjct: 264 IYLQDKSPVYDPKTGFLLVLKAAQN 288
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 495 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 554
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 555 QQALNWLTDSAFKGNKRAQYVLARILRQGIVGPD 588
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 956 SLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1015
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1016 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1055
>gi|189502274|ref|YP_001957991.1| hypothetical protein Aasi_0895 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497715|gb|ACE06262.1| hypothetical protein Aasi_0895 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1493
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYEL 128
AKE F A AD N HA+ WL ++ H G + A+ AA+ G DAQ L
Sbjct: 634 AKECFAKA--ADQGNMHAQNWLGFMY--QHGQGGPQNYQEAIKWFQKAADQGLADAQNNL 689
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + Q+ Q+A + +KA DQ A LG +Y G + ++ A+ + +A
Sbjct: 690 GFMYQNGYGLSQNYQEAIKWFQKAADQGLAAAQNSLGFMYQNGYGLSQNYQEAIKWYQKA 749
Query: 189 SEKGHAGA 196
+E+GHA A
Sbjct: 750 AEQGHADA 757
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ LG + + + QA Y+ +KA DQ + A Y LG +Y G +
Sbjct: 497 AAMQGHVEAQCNLGGMYELGRGIGKDEHQATYWYQKAADQGYAKAQYKLGMMYELGRGIA 556
Query: 176 KDIASALWCFHRASEKGHA 194
KD AL + +A+ +G++
Sbjct: 557 KDENQALHWYQKAAGQGNS 575
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ LG ++ ++A + +KA DQ + A Y LG +Y G V
Sbjct: 785 AAEQGNMYAQNWLGFMYENGQGVEKNYRKAIEWYQKAADQGYAYAQYNLGDMYDNGKGVS 844
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
++ A+ + +A+EKG+A A G + G+ V +
Sbjct: 845 QNYQEAIKWYQKAAEKGNAAAQCGLGFMYENGLGVAQS 882
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ LG + Q+ Q+A + +KA +Q + A LG +Y G V+
Sbjct: 749 AAEQGHADAQNNLGFTYQNGYGLSQNYQEAIKWYQKAAEQGNMYAQNWLGFMYENGQGVE 808
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
K+ A+ + +A+++G+A A G + G V +
Sbjct: 809 KNYRKAIEWYQKAADQGYAYAQYNLGDMYDNGKGVSQ 845
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A GD AQ LG N + ++A + +KA Q H A LG +Y G
Sbjct: 458 LTRKAQQGDVKAQQALGVMYESGNGVTKDVKKAVEWYQKAAMQGHVEAQCNLGGMYELGR 517
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSL--LLRGV 208
+ KD A + + +A+++G+A A G + L RG+
Sbjct: 518 GIGKDEHQATYWYQKAADQGYAKAQYKLGMMYELGRGI 555
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AA+ G+ AQ LG + Q+ Q+A + +KA DQ A LG +Y G
Sbjct: 638 FAKAADQGNMHAQNWLGFMYQHGQGGPQNYQEAIKWFQKAADQGLADAQNNLGFMYQNGY 697
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
+ ++ A+ F +A+++G A A + G + G + + + AA++ A+
Sbjct: 698 GLSQNYQEAIKWFQKAADQGLAAAQNSLGFMYQNGYGLSQNYQEAIKWYQKAAEQGHADA 757
Query: 233 ESNL 236
++NL
Sbjct: 758 QNNL 761
>gi|349610785|ref|ZP_08890112.1| hypothetical protein HMPREF1028_02087 [Neisseria sp. GT4A_CT1]
gi|348615784|gb|EGY65294.1| hypothetical protein HMPREF1028_02087 [Neisseria sp. GT4A_CT1]
Length = 267
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG ++ Q QA + KA +Q HP A LG +Y G V+
Sbjct: 71 AAEQGAATAQYNLGLLYANDSSIHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVR 130
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ +H+++++G+A A G + +G V + + + AA++ A + N
Sbjct: 131 QDYLQAMEWYHKSAKQGYAPAQNNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFN 190
Query: 236 L 236
L
Sbjct: 191 L 191
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 70 TAKENFELALEADNSNTHARY-----WLSKLHLKYHVP-----GACKAMGAALLVD---- 115
TA+ N L L A++S+ H Y W K + H GA A G + D
Sbjct: 78 TAQYNLGL-LYANDSSIHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVRQDYLQA 136
Query: 116 ------AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
+A G AQ LG Q +A + KA +Q A + LG +Y
Sbjct: 137 MEWYHKSAKQGYAPAQNNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFNLGLMYE 196
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
TG V++D A A F +A+E+G A A + G VP+ T
Sbjct: 197 TGRGVRQDYAQAAGWFRKAAEQGDAYAQHNLALMYAFGRGVPQNYT 242
>gi|437823350|ref|ZP_20843580.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435306306|gb|ELO81625.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 331
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 104 ACKAMGAALLVDAANMGDPDAQYELGCRLRVEN-DYVQSDQQAFYYIEKAVDQLHPGALY 162
+C + L+ A+ G+ + QY LGC E+ D + D+ +F+++++A +Q H A Y
Sbjct: 7 SCDNLSLEELIALASQGNSEVQYILGCYSNDESIDGSEEDKLSFHWLQQAAEQGHSEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV-PECLTKLNAKR 221
LLG Y T D AL+ +++++GH A G + ++ P+ ++ R
Sbjct: 67 LLGEKYSTTPTEMHDNTKALFWLEKSAQQGHVLAPNQLGWIWEGETEMTPDNAQAVHWYR 126
Query: 222 VSAAKKARANLESNL 236
+ A++ ++ ++NL
Sbjct: 127 I-GAERGHSHAQNNL 140
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
AN GD +A +G + + Q D++AF + ++A + + Y LG +Y G ++
Sbjct: 239 ANQGDSNAYINIGWMYKQGHGVDQDDKKAFSWFQRAAEDGNITGWYNLGFMYRDGRGTEQ 298
Query: 177 DIASALWCFHRASEKG 192
D AL CF + G
Sbjct: 299 DYQHALNCFLKVQPTG 314
>gi|323451293|gb|EGB07171.1| hypothetical protein AURANDRAFT_71857 [Aureococcus anophagefferens]
Length = 1254
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA+ GD AQ +G L EN +V+ AF Y+ A DQ + A LG Y+ G
Sbjct: 572 LYRTAADRGDAVAQNNIGAFLHSENKFVE----AFRYLALAADQGYTSAENNLGICYMDG 627
Query: 172 DCVKKDIASALWCFHRASEKGHAGA-----AIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
+ + D+ A + F RA+ KGH A AY S + + + + K++ AA+
Sbjct: 628 EGTEVDLGKARYWFERAAAKGHEPAIEWCGTTAYCSTDCQRIDWRDRGHRKVCKKIQAAE 687
Query: 227 KARA 230
ARA
Sbjct: 688 SARA 691
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 33/192 (17%)
Query: 94 KLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAV 153
+ H++ VP A ++G+A A + V+SD++A ++AV
Sbjct: 804 RRHVENEVPEAITSLGSAYHFGALGL-------------------VKSDKKAAKIWKRAV 844
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
+ A+ L Y TG VK D A + A+++G AGA +G+LL + E
Sbjct: 845 ELGDARAMIFLAYAYQTGSGVKLDKKKAERLYRMAADRGDAGAQSNFGALLHAEAKFEEA 904
Query: 214 LTKLNAKRVSAAKKARANLESNLMN----------PVEKAKEQFEVAAQAGCNLGLRWLQ 263
+ L V AA + E+NL + KA+ FE AA G L R L
Sbjct: 905 IRYL----VLAADQGHTVAENNLGCCYKHGEGTDVDLGKARYWFERAAAKGSELATRNLA 960
Query: 264 RIEEEEKRLLTE 275
++ + ++ T+
Sbjct: 961 ALDAQARKTRTK 972
>gi|343511227|ref|ZP_08748403.1| Sel1 domain-containing protein [Vibrio scophthalmi LMG 19158]
gi|342798958|gb|EGU34550.1| Sel1 domain-containing protein [Vibrio scophthalmi LMG 19158]
Length = 443
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ+ L L ++ AF + +A +Q H A Y +G +Y G +
Sbjct: 238 AAQQGHAEAQFNLAMMLYFGAGIEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGRGTE 297
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A +H A+E GHA A + SL GV P + V AAK+ + N
Sbjct: 298 PNKTKAFIWYHHAAENGHADAQFSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYN 357
Query: 236 LMNPVEKAK 244
L +E K
Sbjct: 358 LGVMLEAGK 366
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G +AQY LG QA ++E+A +Q + A Y L T+Y G
Sbjct: 54 LFSQAATDGHSEAQYYLGHMYYFGETTPVDKAQATRWMEQAAEQGNMRAQYHLATMYYHG 113
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
D + ++ + A + +A+E+GHA A + G +L V E L + AA++ A
Sbjct: 114 DGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQALEWYSKAAEQGSAE 173
Query: 232 LESNL 236
+ N+
Sbjct: 174 AQYNM 178
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 75 FELALEA-DNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR 133
FEL +A + ++ A+Y+L ++ KA + AA G+ AQY L
Sbjct: 52 FELFSQAATDGHSEAQYYLGHMYYFGETTPVDKAQATRWMEQAAEQGNMRAQYHLATMYY 111
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ ++ AF++ KA +Q H A +G + V++++ AL + +A+E+G
Sbjct: 112 HGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQALEWYSKAAEQGS 171
Query: 194 AGAAIAYGSLLLRGVQVPECL 214
A A ++L G+ E L
Sbjct: 172 AEAQYNMAAMLAYGISTDEDL 192
>gi|319776413|ref|YP_004138901.1| hypothetical protein HICON_16160 [Haemophilus influenzae F3047]
gi|317451004|emb|CBY87234.1| TPR repeat, SEL1 subfamily [Haemophilus influenzae F3047]
Length = 255
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A D + Q+ LG Q D +A + KA +Q H A + LG +Y G
Sbjct: 51 LWLPLAEQSDANVQFNLGVIYAKGQGVKQDDFEAVKWFRKAAEQGHAEAQFSLGNMYSDG 110
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
VK+D A+ + +A+++G+AGA + G + G V + K A ++ AN
Sbjct: 111 IGVKQDDFEAVKWYRKAADQGYAGAQMNLGVMYANGRGVKQDYFKAVKWYRKAVEQGYAN 170
Query: 232 LESNL 236
++NL
Sbjct: 171 AQANL 175
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ+ LG Q D +A + KA DQ + GA LG +Y G VK
Sbjct: 91 AAEQGHAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGVMYANGRGVK 150
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT------KLNAKRVSAAKKAR 229
+D A+ + +A E+G+A A GS G V + T K A+ SA + +
Sbjct: 151 QDYFKAVKWYRKAVEQGYANAQANLGSAYSAGRGVRQDYTEAVKWFKKAAENGSADGQFK 210
Query: 230 ANLESNLMNPVEK----AKEQFEVAAQAGCNLGLRWLQRIEEEEK 270
L + ++K AKE F A G G + ++ E+
Sbjct: 211 LGLVYLIGQGIQKDRTFAKEWFGKACDNGNQDGCEYYGKLNRGER 255
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 138 YVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
Y QSD Q AF +Q + LG +Y G VK+D A+ F +A+E+GHA A
Sbjct: 40 YEQSDYQTAFKLWLPLAEQSDANVQFNLGVIYAKGQGVKQDDFEAVKWFRKAAEQGHAEA 99
Query: 197 AIAYGSLLLRGVQVPE 212
+ G++ G+ V +
Sbjct: 100 QFSLGNMYSDGIGVKQ 115
>gi|290983794|ref|XP_002674613.1| predicted protein [Naegleria gruberi]
gi|284088204|gb|EFC41869.1| predicted protein [Naegleria gruberi]
Length = 739
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD +Q G + VE DY +AF + K+ +Q A+ LLG +Y +G
Sbjct: 335 AAEQGDAKSQLAAGSMIVLGKGVEKDY----SKAFELVLKSANQNETEAMVLLGNMYFSG 390
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+ KD + A + +A+E+G++ A G + L+G + + +K + AAK+ N
Sbjct: 391 EGCNKDYSQAFKWYSKAAEEGNSTAHFELGLMYLKGKGIEQSDSKAFEYYLKAAKQGNLN 450
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 160 ALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
L+ +G++YL G +++D + A+ F +A+EKGH A G + G+
Sbjct: 162 GLFQIGSMYLKGVGIEQDYSKAMEFFLQAAEKGHCAAQRTIGHIYYEGI 210
>gi|126726955|ref|ZP_01742794.1| Sel1-like repeat protein [Rhodobacterales bacterium HTCC2150]
gi|126703913|gb|EBA03007.1| Sel1-like repeat protein [Rhodobacterales bacterium HTCC2150]
Length = 344
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY +G N + QSD +A + + DQ + A + LG +Y G V
Sbjct: 84 AAERGHAQAQYNMGVSYWYGNGHPQSDTEAEKWYRLSADQGYAQAQFNLGVLYEMGRGVP 143
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D AL F ++E+G A A A G + L G VP+
Sbjct: 144 QDSVEALRLFTLSAEQGDAFAQNALGKIYLGGQGVPQ 180
>gi|407974912|ref|ZP_11155819.1| hypothetical protein NA8A_11425 [Nitratireductor indicus C115]
gi|407429479|gb|EKF42156.1| hypothetical protein NA8A_11425 [Nitratireductor indicus C115]
Length = 600
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AALL++ A GD DAQ+ LG L + VQ +A + KA +Q A Y +G ++
Sbjct: 424 AALLLEPAMAGDADAQFALGTILYGKTAGVQDQVKAIEWFHKAAEQGQANAQYKIGELFA 483
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G +KD A A+E+G + A + G + G VP+
Sbjct: 484 YGSAGQKDPVRAAKWILMAAERGLSAAQVHIGVMYQHGDGVPK 526
>gi|195112224|ref|XP_002000674.1| GI22400 [Drosophila mojavensis]
gi|193917268|gb|EDW16135.1| GI22400 [Drosophila mojavensis]
Length = 816
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELG 129
A E F LA A N+ A +L KL+L+ A A+ MGDP Q LG
Sbjct: 352 ALEYFTLAANAGNAIGFA--FLGKLYLEGSEQIKADNETAFKYFSKASEMGDPVGQSGLG 409
Query: 130 CR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
L V D ++ A Y +A DQ LGT+Y TG+ VK D AL F
Sbjct: 410 LMYLKGLGVPKDSIK----ALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDYKLALKYF 465
Query: 186 HRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNP 239
+ A++ GH G AYG +LR K A+R + + N
Sbjct: 466 NLATQSGHVLAYYNLGIMHAYGMGMLRSCPAAVEFFKNVAERGRWSSRLMHAYSDYKQNR 525
Query: 240 VEKAKEQFEVAAQAG 254
V++A Q+ + A+ G
Sbjct: 526 VDEAYMQYSLMAEVG 540
>gi|373120857|ref|ZP_09534890.1| hypothetical protein HMPREF0995_05726 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371655315|gb|EHO20667.1| hypothetical protein HMPREF0995_05726 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 685
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
E F LE AD HA+Y L K++ + AA L AA G A Y
Sbjct: 447 EQFRTTLEWLTEAADAGRVHAQYELGKIYRDGRGVEKDALLAAAWLTRAAEQGSDTASYA 506
Query: 128 LGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
LG L + + D A ++ ++ + + A Y LG + L G+ V ++I A+
Sbjct: 507 LGVLLLTGGEGLAKDIPSALNWLRRSAEDGNQYAQYRLGRLLLRGEDVPREIEEAIRWLT 566
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPE 212
++E+G+ A A G L L G +VP+
Sbjct: 567 ASAEQGNQYAQYALGKLFLIGKEVPQ 592
>gi|344925131|ref|ZP_08778592.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 900
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYL 169
ALL+ A DP AQYEL + + + + DQ+ AF + ++A DQ H A + L Y+
Sbjct: 67 ALLLQA-EANDPQAQYELA-EIYKKGEIISEDQEKAFEWFKRAADQGHAEAQFRLSNCYV 124
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G V KD+ L +A+E+GH A RG V
Sbjct: 125 IGYGVTKDLEKGLALCEKAAEQGHVAAQFIVARSYFRGEGV 165
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 99 YHVPGACKAMGAALLVD----------AANMGDPDAQYELGCRLRVENDYVQSDQQAFYY 148
+H G C G ++ D AA+ +AQY+L Q QAF +
Sbjct: 296 HHGVGLCYYEGQGVIRDRRQAFDWFKKAADKKYAEAQYQLAQCYHEGEGVAQDSAQAFAW 355
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+KA +Q H A Y L Y G V +++A A C++RA+ +G+A A
Sbjct: 356 YQKAAEQNHAKAQYQLAGFYAKGQIVDQNLAQAFACYYRAASQGYAEA 403
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 59 LNDRRLIPLLKTAKENFE-LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAA 117
L D + T +FE L L+A+ ++ A+Y L++++ K + + AA
Sbjct: 49 LKDYSIKKRRFTESNSFEALLLQAEANDPQAQYELAEIYKKGEIISEDQEKAFEWFKRAA 108
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ G +AQ+ L + + ++ EKA +Q H A +++ Y G+ V KD
Sbjct: 109 DQGHAEAQFRLSNCYVIGYGVTKDLEKGLALCEKAAEQGHVAAQFIVARSYFRGEGVNKD 168
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ +A+ +G+A A + G+ L G +
Sbjct: 169 VKQGYAWAEKAAAQGYAKAQLILGNCYLTGFGI 201
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ ++ A+Y L+ + K + A A AA+ G +AQY+L +
Sbjct: 360 AEQNHAKAQYQLAGFYAKGQIVDQNLAQAFACYYRAASQGYAEAQYQLAECYHKGHGVAA 419
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+QA + KA Q H A L Y TG V D A+ +A+E+G A A
Sbjct: 420 DSRQAVAWYHKAAAQNHAKAQVELALCYYTGHGVTADPVQAISLCQKAAEQGLAEAQCRL 479
Query: 201 GSLLLRGVQVPECLTK 216
G+ L G V + K
Sbjct: 480 GNCYLSGYGVERNVEK 495
>gi|419798038|ref|ZP_14323481.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385696379|gb|EIG26868.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 267
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG ++ Q QA + KA +Q HP A LG +Y G V+
Sbjct: 71 AAEQGAATAQYNLGLLYANDSSNHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVR 130
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ +H+++++G+A A G + +G V + + + AA++ A + N
Sbjct: 131 QDYLQAMEWYHKSAKQGYAPAQNNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFN 190
Query: 236 L 236
L
Sbjct: 191 L 191
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 70 TAKENFELALEADNSNTHARY-----WLSKLHLKYHVP-----GACKAMGAALLVD---- 115
TA+ N L L A++S+ H Y W K + H GA A G + D
Sbjct: 78 TAQYNLGL-LYANDSSNHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVRQDYLQA 136
Query: 116 ------AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
+A G AQ LG Q +A + KA +Q A + LG +Y
Sbjct: 137 MEWYHKSAKQGYAPAQNNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFNLGLMYE 196
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
TG V++D A A F +A+E+G A A + G VP+ T
Sbjct: 197 TGRGVRQDYAQAAGWFRKAAEQGDAYAQHNLALMYAFGRGVPQNYT 242
>gi|386389391|ref|ZP_10074207.1| Sel1 repeat protein [Haemophilus paraphrohaemolyticus HK411]
gi|385695770|gb|EIG26321.1| Sel1 repeat protein [Haemophilus paraphrohaemolyticus HK411]
Length = 219
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +AQ LG Q D +A + KA +Q + A + LG +Y G VK
Sbjct: 91 AAEQGEANAQLNLGVMYDNGRGVKQDDVEAVKWYRKAAEQGYAKAQFNLGNMYANGQGVK 150
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGS--LLLRGVQVPECLTK 216
+D A+ + +A+E+G+A A + G+ L +GVQ + L K
Sbjct: 151 QDDVEAVKWYRKAAEQGNANAQMILGTVYFLGKGVQFNKALAK 193
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG Q D +A + KA +Q + A +LGTVY G V+
Sbjct: 127 AAEQGYAKAQFNLGNMYANGQGVKQDDVEAVKWYRKAAEQGNANAQMILGTVYFLGKGVQ 186
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSL 203
+ A A F +A + G+ YG L
Sbjct: 187 FNKALAKEWFGKACDNGYQDGCEYYGKL 214
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 112 LLVDAANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L + A G+ + Q+ LG V+ DY + A + KA +Q A LG +
Sbjct: 51 LWLPLAEQGEANVQFNLGVMYANGQGVKQDYFE----AVKWYRKAAEQGEANAQLNLGVM 106
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
Y G VK+D A+ + +A+E+G+A A G++ G V +
Sbjct: 107 YDNGRGVKQDDVEAVKWYRKAAEQGYAKAQFNLGNMYANGQGVKQ 151
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
P+ Q++ G ++DY Q AF +Q + LG +Y G VK+D A
Sbjct: 29 PEQQFQQGLSAYQQSDY----QTAFKLWLPLAEQGEANVQFNLGVMYANGQGVKQDYFEA 84
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN 238
+ + +A+E+G A A + G + G V + + AA++ A + NL N
Sbjct: 85 VKWYRKAAEQGEANAQLNLGVMYDNGRGVKQDDVEAVKWYRKAAEQGYAKAQFNLGN 141
>gi|395763182|ref|ZP_10443851.1| Sel1-like repeat-containing serine/threonine protein kinase
[Janthinobacterium lividum PAMC 25724]
Length = 202
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+V A +G+ DAQ+ LG + Q +QA ++ KA +Q A Y++G +Y TG+
Sbjct: 41 IVPLAKIGNADAQHLLGLMYYMGRGLPQDYRQAMFWHRKAAEQGKADAQYVVGAMYYTGN 100
Query: 173 CVKKDIASALWCFHRASEKGHAGA 196
V +D A+ F +A+E+ HA A
Sbjct: 101 AVLQDHNQAVSWFRKAAEQNHAQA 124
>gi|357031939|ref|ZP_09093880.1| hypothetical protein GMO_15810 [Gluconobacter morbifer G707]
gi|356414585|gb|EHH68231.1| hypothetical protein GMO_15810 [Gluconobacter morbifer G707]
Length = 590
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GDPD+ LG D + +A + + A +Q H GA LG +YLTG+ V
Sbjct: 277 AALNGDPDSAALLGDLYANGGDLPPNLMEAAKWYQLAGEQKHGGAARALGLLYLTGNGVP 336
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D +A F A+E G AA +G+L+L G E
Sbjct: 337 RDPDTAAHWFAVAAENGDGQAAADFGNLVLTGASASE 373
>gi|344925132|ref|ZP_08778593.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 616
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 113 LVDAANMGDPDAQYELGC-----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L++ A GD +AQY LG ++++++D + ++A + KA DQ H ALY LG
Sbjct: 88 LIEQAQAGDREAQYRLGTVYHKGKMKLDSD---AAKEAIRWFTKAADQGHAKALYELGGY 144
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
Y +G+ ++ D +A++K + A I G L G
Sbjct: 145 YYSGESLEYDAEKGFKLIEKAAQKNYVVAQITLGDYYLLG 184
>gi|78778186|ref|YP_394501.1| Sel1 repeat-containing protein [Sulfurimonas denitrificans DSM
1251]
gi|78498726|gb|ABB45266.1| Sel1-like repeat [Sulfurimonas denitrificans DSM 1251]
Length = 233
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L +A GD +AQY+LG N+ Q+ ++AF + K+ Q + A Y L +Y GD
Sbjct: 74 LEKSAQSGDANAQYDLGMFYLKGNNVEQNSKKAFELLSKSSAQNNINAQYNLALMYYKGD 133
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
V + A+ +A+ GH GAA G + ++ ++ E
Sbjct: 134 GVDLSVPKAVELLDKAATSGHVGAAQNVGHIYMQLLKFDEA 174
>gi|291002059|ref|XP_002683596.1| predicted protein [Naegleria gruberi]
gi|284097225|gb|EFC50852.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD AQ+ +G V+ DYV+ AF + KA ++ A +++G +Y G
Sbjct: 92 AAEKGDTTAQFNVGAFFEEGKGVQQDYVK----AFEWYLKAAEKGDTDAQFVIGCIYRKG 147
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V++D A + RA+EKG+A A + G G+ V + K AA+K +
Sbjct: 148 AGVEQDDVKAFEWYLRAAEKGYARAQLNIGVCFDDGIGVEQDDVKAFEWYFKAAEKGCKD 207
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRI 265
+ NL +K + + L L WL ++
Sbjct: 208 GQFNLGCCYKKGE-----GVEMDLKLALYWLSKV 236
>gi|409403335|ref|ZP_11252669.1| Sel1 domain-containing protein, partial [Acidocella sp. MX-AZ02]
gi|409128249|gb|EKM98173.1| Sel1 domain-containing protein, partial [Acidocella sp. MX-AZ02]
Length = 552
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G DA+ LG + Q +AF ++KA DQ A Y LGT+Y G V
Sbjct: 152 AADQGYADAETNLGGNYMGGHGVHQDYTKAFALLQKAADQGVSNAQYGLGTMYENGWGVP 211
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ F A+ +G+ A G + G VP+ K + AA + A E N
Sbjct: 212 QDSAQAVSLFKEAAAQGNDNAEEEIGYMYYAGQGVPQDYVKASRYFKQAADQGNAEAEYN 271
Query: 236 L 236
L
Sbjct: 272 L 272
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G P A++E+G N Q QA + +KA DQ + A LG Y+ G V
Sbjct: 116 AADQGLPSAEWEIGLFYDTGNGVQQDYVQANIWYKKAADQGYADAETNLGGNYMGGHGVH 175
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A +A+++G + A G++ G VP+ +A+ VS K+A A N
Sbjct: 176 QDYTKAFALLQKAADQGVSNAQYGLGTMYENGWGVPQD----SAQAVSLFKEAAAQGNDN 231
Query: 236 LMNPVE--------------KAKEQFEVAAQAG-----CNLGLRWL--QRIEEEEKR 271
+ KA F+ AA G NLG+ +L Q + E++ +
Sbjct: 232 AEEEIGYMYYAGQGVPQDYVKASRYFKQAADQGNAEAEYNLGVDYLNAQGVTEDDPK 288
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR----VE 135
AD ++A+Y L ++ + VP A +L +AA G+ +A+ E+G V
Sbjct: 189 ADQGVSNAQYGLGTMYENGWGVP-QDSAQAVSLFKEAAAQGNDNAEEEIGYMYYAGQGVP 247
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
DYV++ + Y ++A DQ + A Y LG YL V +D A F +++E+ +A
Sbjct: 248 QDYVKASR----YFKQAADQGNAEAEYNLGVDYLNAQGVTEDDPKAAALFMKSAEQNYAS 303
Query: 196 AAIAYGSLLLRGVQV 210
A A G L G V
Sbjct: 304 AEDALGQLYDNGKGV 318
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L +AA +G + LG L D V ++Q A ++ + A DQ P A + +G Y T
Sbjct: 76 LFQEAAYVGYARGEANLGL-LYTRGDGVPANQADAIHWFQLAADQGLPSAEWEIGLFYDT 134
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G+ V++D A + +A+++G+A A G + G V + TK A AA + +
Sbjct: 135 GNGVQQDYVQANIWYKKAADQGYADAETNLGGNYMGGHGVHQDYTKAFALLQKAADQGVS 194
Query: 231 NLESNLMNPVEKAKEQFEVAAQA 253
N + L E + +AQA
Sbjct: 195 NAQYGLGTMYENGWGVPQDSAQA 217
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
ALL AA+ G +AQY LG Q QA ++A Q + A +G +Y
Sbjct: 183 ALLQKAADQGVSNAQYGLGTMYENGWGVPQDSAQAVSLFKEAAAQGNDNAEEEIGYMYYA 242
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V +D A F +A+++G+A A G L V E K A + +A++ A
Sbjct: 243 GQGVPQDYVKASRYFKQAADQGNAEAEYNLGVDYLNAQGVTEDDPKAAALFMKSAEQNYA 302
Query: 231 NLESNLMNPVEKAK 244
+ E L + K
Sbjct: 303 SAEDALGQLYDNGK 316
>gi|402495842|ref|ZP_10842561.1| Sel1 domain-containing protein repeat-containing protein
[Aquimarina agarilytica ZC1]
Length = 502
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
+A LL+ +A+ D +AQY LG N ++++AF YI+KA Q P A + LG
Sbjct: 51 EATALQLLLISADNNDLNAQYLLGHIYAHGNGVKINEEKAFEYIKKAASQNQPNAAHELG 110
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAA 225
Y G K + +A+ F +A E G+ A + G + +G+ +T+ K ++
Sbjct: 111 VFYKKGIGCKLNFNTAISWFKKAYELGYDQGAYSIGYMYFKGLG---SITQDYTKAITWF 167
Query: 226 KKARANLESNLM 237
KK+ + + +
Sbjct: 168 KKSNYPMSKHFL 179
>gi|283856194|ref|YP_161868.2| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|283775190|gb|AAV88757.2| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 276
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ AAN G +AQY L Q+ +QA ++ +++ +Q A + LG +Y
Sbjct: 110 SFFQKAANQGLAEAQYSLAIAYYTGRGVTQNYEQASFWFQRSANQGFVPAQFYLGVMYRN 169
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
G + +D AL+ FH+A++KG+A A G + G
Sbjct: 170 GAGIPEDDDRALFWFHKAADKGYADAQYNLGLIYHEG 206
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+AN G AQ+ LG R + D +A ++ KA D+ + A Y LG +Y G VK
Sbjct: 151 SANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVK 210
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD A + + +A+ +G A G L+G V
Sbjct: 211 KDEKQATFWYQQAANQGLVEAEFNLGIAYLKGQGV 245
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A+ G AQ LG DQQA + +KA +Q A Y L Y TG V
Sbjct: 79 SASQGYAPAQAALGYAYSSGLGVTHDDQQAVSFFQKAANQGLAEAQYSLAIAYYTGRGVT 138
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A + F R++ +G A G + G +PE + AA K A+ + N
Sbjct: 139 QNYEQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYN 198
Query: 236 L 236
L
Sbjct: 199 L 199
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA GD AQY LG D +SD+QA + +K+ Q + A LG Y +G
Sbjct: 40 LQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSASQGYAPAQAALGYAYSSGL 99
Query: 173 CVKKDIASALWCFHRASEKGHAGA----AIAY 200
V D A+ F +A+ +G A A AIAY
Sbjct: 100 GVTHDDQQAVSFFQKAANQGLAEAQYSLAIAY 131
>gi|153956447|ref|YP_001397212.1| hypothetical protein CKL_3864 [Clostridium kluyveri DSM 555]
gi|219856753|ref|YP_002473875.1| hypothetical protein CKR_3410 [Clostridium kluyveri NBRC 12016]
gi|146349305|gb|EDK35841.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219570477|dbj|BAH08461.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 932
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-Q 143
N +A+Y L K+ L+ + +A+ A + AA G+ AQY LG +L ++ +V+ D Q
Sbjct: 642 NVNAQYLLGKVCLETSIGNPTQAV--AWMTKAAEAGNAGAQYALG-KLYRDSTHVEKDIQ 698
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+ + A +Q + A Y LG +YL+ + + K++ A+ +S+ G+A A A L
Sbjct: 699 KTVAMFKAAAEQKNEYAAYQLGRLYLSSEDIPKNVPEAVKWLTLSSDLGNAYAQYALAKL 758
Query: 204 LLRGVQVPE 212
L G +P+
Sbjct: 759 YLSGDGIPK 767
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 81 ADNSNTHARYWLSKLHL-KYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N A+Y L KL+ HV + A+ AA + A Y+LG D
Sbjct: 672 AEAGNAGAQYALGKLYRDSTHVEKDIQKT-VAMFKAAAEQKNEYAAYQLGRLYLSSEDIP 730
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
++ +A ++ + D + A Y L +YL+GD + K++ A+ F ++EK + AA
Sbjct: 731 KNVPEAVKWLTLSSDLGNAYAQYALAKLYLSGDGIPKNVGEAIRLFTLSAEKKNEFAAYQ 790
Query: 200 YGSLLLRGVQVPE 212
G L L+G VP+
Sbjct: 791 LGKLYLQGEDVPK 803
>gi|397665229|ref|YP_006506767.1| enhanced entry protein EnhC [Legionella pneumophila subsp.
pneumophila]
gi|395128640|emb|CCD06858.1| enhanced entry protein EnhC [Legionella pneumophila subsp.
pneumophila]
Length = 1200
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AEYFLESKHAGNKKLGIIWLNKAAENGDPKALTALGRFYVAGQI 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN--AKRVSAAKKARAN 231
V KD + ++A+ + +A A + G L L Q E + LN AK+ + A A+
Sbjct: 204 VAKDTDKGVELLNKAASEQYAPAMLELGKLALMQNQYDEAIQWLNKAAKQSTEATLELAH 263
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCN 256
+ +PV K F + +A N
Sbjct: 264 IYLQDKSPVYDPKTGFLLVLKAAQN 288
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 495 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 554
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 555 QQALNWLTDSAFKGNKRAQYVLARILRQGIVGPD 588
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 956 SFFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1015
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1016 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1055
>gi|340363635|ref|ZP_08685958.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339885314|gb|EGQ75043.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 348
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +AQY LG Q D QA + +AV+Q A Y LG +Y G V+
Sbjct: 220 AAEQGNAEAQYNLGVMYTEGQGVRQDDAQAVQWFRRAVEQGDANAQYNLGVMYAKGRGVR 279
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
+D L +H+A+ G A A G + RGV+ + K
Sbjct: 280 QDYVQTLQLWHKAARHGVAEAQSGLGWMYYTGRGVRQNSVIAK 322
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G DAQ LG + V DYVQ A + KA +Q + A Y LG +Y G
Sbjct: 184 AAGQGYKDAQNNLGVMYKDGKGVRKDYVQ----AVKWYRKAAEQGNAEAQYNLGVMYTEG 239
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V++D A A+ F RA E+G A A G + +G V +
Sbjct: 240 QGVRQDDAQAVQWFRRAVEQGDANAQYNLGVMYAKGRGVRQ 280
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G +AQ LG + Q D QA + KAV+Q A Y LG +Y G V+
Sbjct: 112 AADQGFAEAQNNLGAMYKDGKGIRQDDNQAVQWYRKAVEQGVAAAQYNLGLMYYEGRGVR 171
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D AL + +A+ +G+ A G + G V + + AA++ A + N
Sbjct: 172 QDYKQALQWYRKAAGQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYN 231
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
L + + + AQA ++W +R E+
Sbjct: 232 LGVMYTEGQGVRQDDAQA-----VQWFRRAVEQ 259
>gi|384411626|ref|YP_005620991.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932000|gb|AEH62540.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 234
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ AAN G+ AQY LG SD++A + ++A Q + A + LG Y
Sbjct: 104 SFFQKAANQGNASAQYNLGMAYSNGQGVPHSDEEAASWYQRAAHQGYAPAEFNLGAAYYH 163
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
G+ V +D A++ + +A+E+G A A A G + G
Sbjct: 164 GEGVVQDYGQAVFWYQKAAEQGDAKAQTALGVAYITG 200
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 55/124 (44%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA GD AQY LG D +SD+QA + +K+ Q + A LG Y +G
Sbjct: 34 LQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSASQGYAPAQAALGYAYSSGL 93
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V D A+ F +A+ +G+A A G G VP + + AA + A
Sbjct: 94 GVPHDDQQAVSFFQKAANQGNASAQYNLGMAYSNGQGVPHSDEEAASWYQRAAHQGYAPA 153
Query: 233 ESNL 236
E NL
Sbjct: 154 EFNL 157
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 39/92 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A+ G AQ LG DQQA + +KA +Q + A Y LG Y G V
Sbjct: 73 SASQGYAPAQAALGYAYSSGLGVPHDDQQAVSFFQKAANQGNASAQYNLGMAYSNGQGVP 132
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
A + RA+ +G+A A G+ G
Sbjct: 133 HSDEEAASWYQRAAHQGYAPAEFNLGAAYYHG 164
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G A++ LG VQ QA ++ +KA +Q A LG Y+TG V
Sbjct: 145 AAHQGYAPAEFNLGAAYYHGEGVVQDYGQAVFWYQKAAEQGDAKAQTALGVAYITGRGVT 204
Query: 176 KDIASALWCFHRASEKG 192
K +AL +A+++G
Sbjct: 205 KSRDNALIWIQKAADQG 221
>gi|397663782|ref|YP_006505320.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
gi|395127193|emb|CCD05383.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
Length = 376
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD +Y LG + + +D +A FY+ +A + H A L YL G V
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
D A + + A+EKG A G LLL G V + + +A +
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQG------ 299
Query: 235 NLMNPVEKAKEQFEVAAQAGCNLGL----RWLQ-----RIEEEEKRL------LTESSRI 279
NPV +AK + A G N L WL+ + EE K+L LTE ++
Sbjct: 300 ---NPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSLEAKLTEPEKL 356
Query: 280 E 280
E
Sbjct: 357 E 357
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+ AA G+P AQ +G + SD +AF + +KA +Q + A LG Y+ G
Sbjct: 112 MKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 174 VKKDIASALWCFHRASEKG 192
KD+ A + +A+E+G
Sbjct: 172 TPKDVKKAFEWYQKAAEQG 190
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ + AQ LG Q +AF + KA +Q +P A +G +Y TGD V
Sbjct: 78 AADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVA 137
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A F +A+E+G++ A + G + G P+ + K
Sbjct: 138 ASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A++ + +A+ +L+ +LK + A A AA G P+AQ +LG L +
Sbjct: 224 ANHGHVNAQTYLAYYYLKGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDK 283
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
QQA Y+ K+ Q +P LG +YL G V K + A A+E
Sbjct: 284 DYQQAAYWFGKSAHQGNPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAE 333
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA G+ +A Y LG + + ++A + +KA D+ + A LG +Y TG
Sbjct: 39 LMQAAKEGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGK 98
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP----ECLTKLNAKRVSAAKKA 228
V +D A A + +A+E+G+ A G + G V + T KA
Sbjct: 99 GVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKA 158
Query: 229 RANLESNLM------NPVEKAKEQFEVAAQAGCNLG 258
+ NL M V+KA E ++ AA+ G G
Sbjct: 159 QVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG 194
>gi|302387472|ref|YP_003823294.1| Sel1 domain-containing protein repeat-containing protein
[Clostridium saccharolyticum WM1]
gi|302198100|gb|ADL05671.1| Sel1 domain protein repeat-containing protein [Clostridium
saccharolyticum WM1]
Length = 932
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 81 ADNSNTHARYWLSKL-----HLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE 135
A+ N A+Y L KL H+ +P A A+ AA + A Y+LG
Sbjct: 672 AEAGNAGAQYALGKLYRDGTHVDKDIPKAV-----AMFTAAAEQKNEYAAYQLGKLYLSS 726
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
D ++ +A ++ + D + A Y L +YL+GD + KD+ +A+ F ++EK +
Sbjct: 727 ADLPKNLPEAVKWLTLSSDLSNAYAGYSLAKLYLSGDGIPKDVGAAIRLFTLSAEKKNEF 786
Query: 196 AAIAYGSLLLRGVQVPE 212
AA G L L+G VP+
Sbjct: 787 AAYQLGKLYLQGEDVPK 803
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 18/124 (14%)
Query: 112 LLVDAANMGDPDAQYELG-------CR---LRVENDYVQSDQQAFYYIEKAVDQLHPGAL 161
L + A G+ A ++LG CR L++ + + + AF EK ++ P
Sbjct: 437 LFLLEAESGNALAMHDLGRMFADGLCREIDLQIAHAWYEKALAAFLSAEK--EKPKPYLE 494
Query: 162 YLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE------CLT 215
Y +G +Y G ++D A F A+EK H A + G L RG VP+ CL
Sbjct: 495 YRIGKIYAAGLGTEQDYGQAASWFQEAAEKNHKYAQYSLGCLYYRGQGVPQDYTEALCLY 554
Query: 216 KLNA 219
L+A
Sbjct: 555 TLSA 558
>gi|148358886|ref|YP_001250093.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296106934|ref|YP_003618634.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
gi|148280659|gb|ABQ54747.1| TPR repeat protein [Legionella pneumophila str. Corby]
gi|295648835|gb|ADG24682.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 376
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD +Y LG + + +D +A FY+ +A + H A L YL G V
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
D A + + A+EKG A G LLL G V + + +A +
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQG------ 299
Query: 235 NLMNPVEKAKEQFEVAAQAGCNLGL----RWLQ-----RIEEEEKRL------LTESSRI 279
NPV +AK + A G N L WL+ + EE K+L LTE ++
Sbjct: 300 ---NPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSLEAKLTEPEKL 356
Query: 280 E 280
E
Sbjct: 357 E 357
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+ AA G+P AQ +G + SD +AF + +KA +Q + A LG Y+ G
Sbjct: 112 MKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 174 VKKDIASALWCFHRASEKG 192
KD+ A + +A+E+G
Sbjct: 172 TPKDVKKAFEWYQKAAEQG 190
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ + AQ LG Q +AF + KA +Q +P A +G +Y TGD V
Sbjct: 78 AADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVA 137
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A F +A+E+G++ A + G + G P+ + K
Sbjct: 138 ASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A++ + +A+ +L+ +LK + A A AA G P+AQ +LG L +
Sbjct: 224 ANHGHVNAQTYLAYYYLKGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDK 283
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
QQA Y+ K+ Q +P LG +YL G V K + A A+E
Sbjct: 284 DYQQAAYWFGKSAHQGNPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAE 333
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA G+ +A Y LG + + ++A + +KA D+ + A LG +Y TG
Sbjct: 39 LMQAAKEGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGK 98
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP----ECLTKLNAKRVSAAKKA 228
V +D A A + +A+E+G+ A G + G V + T KA
Sbjct: 99 GVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKA 158
Query: 229 RANLESNLM------NPVEKAKEQFEVAAQAGCNLG 258
+ NL M V+KA E ++ AA+ G G
Sbjct: 159 QVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG 194
>gi|419798285|ref|ZP_14323700.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385695080|gb|EIG25651.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 286
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ + A GD +Q +LG Q +QA Y+ EKA + A + LG +Y G
Sbjct: 45 LIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAEAQFNLGIIYYEG 104
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A + + +A+E+G+A AA G L G+ +P+
Sbjct: 105 QGTAQDYRQAKFWWEKAAEQGNAEAAFNLGILHYAGIGIPQ 145
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYEL 128
AK FE A DN+ A++ L ++ Y G + A AA G+ +A + L
Sbjct: 78 AKYWFEKAAHNDNA--EAQFNLGIIY--YEGQGTAQDYRQAKFWWEKAAEQGNAEAAFNL 133
Query: 129 G----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
G + + DY+Q+ + KA DQ A + LG +Y +G+ V +D A
Sbjct: 134 GILHYAGIGIPQDYIQAKT----WFHKAADQGEDSAQFYLGLMYYSGEGVGQDYKLAKSW 189
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL-------- 236
F +A++KG+A A G + G V + K AA++ AN ++NL
Sbjct: 190 FEKAAKKGNAKAQYNLGIMYAEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGVLYENGQ 249
Query: 237 --MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKR 271
+AK FE AA G L L+ I ++ +
Sbjct: 250 GVTQNFTQAKSWFEKAAAQGNTLAQHALEYIVQQNQN 286
>gi|113460459|ref|YP_718521.1| TPR repeat-containing protein [Haemophilus somnus 129PT]
gi|112822502|gb|ABI24591.1| conserved hypothetical protein, with TPR repeat (tetratrico peptide
repeat) [Haemophilus somnus 129PT]
Length = 252
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 21/129 (16%)
Query: 84 SNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ 143
S+T A YW K AA G DAQY LG + QSD
Sbjct: 76 SDTQAVYWWKK---------------------AAEQGLADAQYNLGLMYKKGRGVAQSDT 114
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
QA Y+ KA +Q A LG +Y G V ++ A++ F +A+E+G A + G +
Sbjct: 115 QAIYWYTKAAEQGIAEAQSKLGGMYAKGRGVTQNYQQAVYWFTKAAEQGDAKVQLLLGLM 174
Query: 204 LLRGVQVPE 212
G V +
Sbjct: 175 YENGRSVTQ 183
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A G +AQY LG + QSD QA Y+ +KA +Q A Y LG +Y G
Sbjct: 47 LFKQLAEQGLANAQYNLGVMYKKGRGVAQSDTQAVYWWKKAAEQGLADAQYNLGLMYKKG 106
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V + A++ + +A+E+G A A G + +G V +
Sbjct: 107 RGVAQSDTQAIYWYTKAAEQGIAEAQSKLGGMYAKGRGVTQ 147
>gi|260753305|ref|YP_003226198.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552668|gb|ACV75614.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 237
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ AAN G+ AQY LG SD++A + ++A Q + A + LG Y
Sbjct: 107 SFFQKAANQGNASAQYNLGMAYSNGQGVPHSDEEAASWYQRAAHQGYAPAEFNLGAAYYH 166
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
G+ V +D A++ + +A+E+G A A A G + G
Sbjct: 167 GEGVVQDYGQAVFWYQKAAEQGDAKAQTALGVAYITG 203
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 55/124 (44%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA GD AQY LG D +SD+QA + +K+ Q + A LG Y +G
Sbjct: 37 LQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSASQGYAPAQAALGYAYSSGL 96
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V D A+ F +A+ +G+A A G G VP + + AA + A
Sbjct: 97 GVPHDDQQAVSFFQKAANQGNASAQYNLGMAYSNGQGVPHSDEEAASWYQRAAHQGYAPA 156
Query: 233 ESNL 236
E NL
Sbjct: 157 EFNL 160
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 39/92 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A+ G AQ LG DQQA + +KA +Q + A Y LG Y G V
Sbjct: 76 SASQGYAPAQAALGYAYSSGLGVPHDDQQAVSFFQKAANQGNASAQYNLGMAYSNGQGVP 135
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
A + RA+ +G+A A G+ G
Sbjct: 136 HSDEEAASWYQRAAHQGYAPAEFNLGAAYYHG 167
>gi|425064333|ref|ZP_18467458.1| hypothetical protein X73_01701 [Pasteurella multocida subsp.
gallicida X73]
gi|404381275|gb|EJZ77753.1| hypothetical protein X73_01701 [Pasteurella multocida subsp.
gallicida X73]
Length = 155
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A G+ AQ+ +G R+ + D V+ D QQA + +K+ +Q HP A Y LG +Y
Sbjct: 31 LWLSRAEQGEMSAQFNVG-RMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSE 89
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
GD + +D A + +++ +G A A G+L G V
Sbjct: 90 GDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGV 129
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY LG + Q +QA+ + ++ Q ALY LGT+Y G+ V+
Sbjct: 71 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGVE 130
Query: 176 KDIASALWCFHRASEKG 192
++ A F +A + G
Sbjct: 131 RNWDRAKMYFKQACKAG 147
>gi|15603476|ref|NP_246550.1| hypothetical protein PM1611 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722008|gb|AAK03695.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 172
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A G+ AQ+ +G R+ + D V+ D QQA + +K+ +Q HP A Y LG +Y
Sbjct: 48 LWLSRAEQGEMSAQFNVG-RMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSE 106
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
GD + +D A + +++ +G A A G+L G
Sbjct: 107 GDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANG 143
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY LG + Q +QA+ + ++ Q ALY LGT+Y G+ ++
Sbjct: 88 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGIE 147
Query: 176 KDIASALWCFHRASEKG 192
+D A F +A + G
Sbjct: 148 RDWDRAKMYFKQACKAG 164
>gi|421264374|ref|ZP_15715361.1| hypothetical protein KCU_08422 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401688308|gb|EJS83929.1| hypothetical protein KCU_08422 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 172
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A G+ AQ+ +G R+ + D V+ D QQA + +K+ +Q HP A Y LG +Y
Sbjct: 48 LWLSRAEQGEMTAQFNVG-RMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSE 106
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
GD + +D A + +++ +G A A G+L G V
Sbjct: 107 GDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGV 146
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY LG + Q +QA+ + ++ Q ALY LGT+Y G+ V+
Sbjct: 88 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGVE 147
Query: 176 KDIASALWCFHRASEKG 192
++ A F +A + G
Sbjct: 148 RNWDRAKMYFKQACKAG 164
>gi|359792371|ref|ZP_09295189.1| Sel1 domain-containing protein repeat-containing protein
[Mesorhizobium alhagi CCNWXJ12-2]
gi|359251548|gb|EHK54895.1| Sel1 domain-containing protein repeat-containing protein
[Mesorhizobium alhagi CCNWXJ12-2]
Length = 269
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 147 YYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLR 206
YY+ A + +P A + +G ++L G+ VK + A F A+EKGHAGA G+LL +
Sbjct: 152 YYMRAAANYRNPNAQFEMGNMFLKGEGVKASVRQAGRWFQLAAEKGHAGAQATLGNLLFQ 211
Query: 207 GVQVPECLTKLNA 219
+V L + A
Sbjct: 212 SGRVVRGLAMMTA 224
>gi|195392343|ref|XP_002054817.1| GJ24649 [Drosophila virilis]
gi|194152903|gb|EDW68337.1| GJ24649 [Drosophila virilis]
Length = 810
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELG 129
A E F LA A N+ A +L KL+L+ A A+ MGDP Q LG
Sbjct: 353 ALEYFTLAANAGNAIGFA--FLGKLYLEGSEQIKADNETAFKYFSKASEMGDPVGQSGLG 410
Query: 130 CR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
L V D ++ A Y +A DQ LGT+Y TG+ VK D AL F
Sbjct: 411 LMYLKGLGVPKDSIK----ALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDYKLALKYF 466
Query: 186 HRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNP 239
+ A++ GH G AYG +LR K A+R + + N
Sbjct: 467 NLATQSGHVLAYYNLGIMHAYGMGMLRSCPAAVEFFKNVAERGRWSSRLMHAYSDYKQNR 526
Query: 240 VEKAKEQFEVAAQAG 254
+++A Q+ + A+ G
Sbjct: 527 IDEAYMQYSLMAEVG 541
>gi|189219667|ref|YP_001940308.1| TPR repeat protein, SEL1 subfamily [Methylacidiphilum infernorum
V4]
gi|189186525|gb|ACD83710.1| TPR repeat protein, SEL1 subfamily [Methylacidiphilum infernorum
V4]
Length = 526
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ ELG Q+ QA Y+ +KA Q A + LG +Y G V
Sbjct: 292 AAEQGNAQAQCELGTAYLDGKGVPQNYVQAIYWYQKAAKQGDIVAQFNLGLLYDKGRGVS 351
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A++ + +A+EKG AG+ + G G VP+ + AA++ A +SN
Sbjct: 352 QDYAQAVYWWRQAAEKGDAGSQLNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQSN 411
Query: 236 L 236
L
Sbjct: 412 L 412
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GDP AQ LG V DYV QA Y+ +KA +Q + A + LG Y G
Sbjct: 184 AAEQGDPRAQLNLGYAYDYGQGVPQDYV----QAVYWYQKAAEQDNAKAQFCLGVAYYKG 239
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA- 230
V +D A++ F +A+E+G A G G VP+ + AA++ A
Sbjct: 240 LGVHQDSIQAVYWFRKAAEQGLVEAQFELGLAYYEGRGVPQDYIQAVYWYEKAAEQGNAQ 299
Query: 231 -------------NLESNLMNPV---EKAKEQFEVAAQAGCNLGL 259
+ N + + +KA +Q ++ AQ NLGL
Sbjct: 300 AQCELGTAYLDGKGVPQNYVQAIYWYQKAAKQGDIVAQ--FNLGL 342
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G +AQ+ELG V DY+Q A Y+ EKA +Q + A LGT YL G
Sbjct: 256 AAEQGLVEAQFELGLAYYEGRGVPQDYIQ----AVYWYEKAAEQGNAQAQCELGTAYLDG 311
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V ++ A++ + +A+++G A G L +G V + + AA+K A
Sbjct: 312 KGVPQNYVQAIYWYQKAAKQGDIVAQFNLGLLYDKGRGVSQDYAQAVYWWRQAAEKGDAG 371
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
+ NL + + + AQA + W Q+ E+
Sbjct: 372 SQLNLGYAYDYGQGVPQDHAQA-----VYWYQKAAEQ 403
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCVK 175
A G+ AQ +LG + QA Y+ KA +Q + A Y LG Y G V
Sbjct: 76 ARGGNAQAQLDLGDAYSRGQGVTKDLAQAVYWYRKAAEQGNVQAQYKLGFAYYWGVGGVP 135
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A++ F +A+E+GH+ + G GV VP+ L++ AA++ + N
Sbjct: 136 KDFDKAVYWFRKAAEQGHSLSQFVMGRAYTVGVGVPKDLSQAANWYRKAAEQGDPRAQLN 195
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEE 269
L + + + QA + W Q+ E++
Sbjct: 196 LGYAYDYGQGVPQDYVQA-----VYWYQKAAEQD 224
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +Q LG Q QA Y+ +KA +Q + A LG Y G V+
Sbjct: 364 AAEKGDAGSQLNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQSNLGVAYYKGLGVR 423
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ F +A+E+G+ A + G G VP+ + AA++ A + N
Sbjct: 424 QDYIQAVYWFKKAAEQGYPIAQLNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQFN 483
Query: 236 L 236
L
Sbjct: 484 L 484
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G+ AQY+LG V D +A Y+ KA +Q H + +++G Y G V
Sbjct: 111 AAEQGNVQAQYKLGFAYYWGVGGVPKDFDKAVYWFRKAAEQGHSLSQFVMGRAYTVGVGV 170
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
KD++ A + +A+E+G A + G G VP+
Sbjct: 171 PKDLSQAANWYRKAAEQGDPRAQLNLGYAYDYGQGVPQ 208
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ LG Q QA Y+ +A ++ G+ LG Y G V
Sbjct: 328 AAKQGDIVAQFNLGLLYDKGRGVSQDYAQAVYWWRQAAEKGDAGSQLNLGYAYDYGQGVP 387
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A A++ + +A+E+G+A A G +G+ V
Sbjct: 388 QDHAQAVYWYQKAAEQGNAMAQSNLGVAYYKGLGV 422
>gi|170744062|ref|YP_001772717.1| Sel1 domain-containing protein [Methylobacterium sp. 4-46]
gi|168198336|gb|ACA20283.1| Sel1 domain protein repeat-containing protein [Methylobacterium sp.
4-46]
Length = 321
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A G A L AA G+P A Y L L + + +A + +A DQ P A + LG
Sbjct: 134 AAGRAWLEKAAAKGEPTASYNLALIL-LGTGSPEDLARAATLLRRAADQEVPAAQHALGI 192
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+YL G V KD+A A F RA++ G + + LL G V
Sbjct: 193 LYLKGRGVAKDLAEAASLFRRAADNGDIAGEVEFSILLFNGEGV 236
>gi|398380210|ref|ZP_10538328.1| TPR repeat-containing protein [Rhizobium sp. AP16]
gi|397721526|gb|EJK82074.1| TPR repeat-containing protein [Rhizobium sp. AP16]
Length = 393
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
AD N A+Y L+ ++ G K G AL AA+ G +AQY L R
Sbjct: 189 ADQGNVDAQYNLAIMYDS--GEGITKDSGQALAWYRKAADQGKIEAQYNLAVMYRDGAGV 246
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ QA + KA DQ A Y LGT+Y GD + +D A+ F +A+++G A
Sbjct: 247 PKDGAQAVTWFRKAADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEY 306
Query: 199 AYGSLLLRGVQV----PECL 214
G + G V PE +
Sbjct: 307 NLGVMYRDGEGVAKNGPEAV 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ A+++LG ++ QA + KA DQ + A Y LG +Y G+ V
Sbjct: 80 AADQGNAKAEFDLGAMYDKGEGMAKNHAQAILWYRKAADQGYADAQYNLGVIYDEGEGVP 139
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A + +A+E+G+A A G + G V + ++ A AA + + + N
Sbjct: 140 KDRTLAFVWYSKAAEQGNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYN 199
Query: 236 L 236
L
Sbjct: 200 L 200
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ DAQY L + QA + KA DQ A Y L +Y G V
Sbjct: 188 AADQGNVDAQYNLAIMYDSGEGITKDSGQALAWYRKAADQGKIEAQYNLAVMYRDGAGVP 247
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A A+ F +A+++G A A G++ G + E + A AA + E N
Sbjct: 248 KDGAQAVTWFRKAADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEYN 307
Query: 236 L 236
L
Sbjct: 308 L 308
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AN GD AQ +LG ++ D ++ D +QA + KA DQ + A + LG +Y G+ +
Sbjct: 45 ANKGDATAQLKLGEMYKL-GDGIEKDLKQALKWYRKAADQGNAKAEFDLGAMYDKGEGMA 103
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
K+ A A+ + +A+++G+A A G + G VP+ T AA++ A + N
Sbjct: 104 KNHAQAILWYRKAADQGYADAQYNLGVIYDEGEGVPKDRTLAFVWYSKAAEQGNAAAQFN 163
Query: 236 L 236
+
Sbjct: 164 V 164
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD DAQY LG + + D +A + KA DQ A Y LG +Y G+ V
Sbjct: 260 AADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVA 319
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
K+ A+ F +A+ + +A AA+ G + G VP
Sbjct: 320 KNGPEAVGWFEKAAAENYADAALNLGVMYRDGDGVP 355
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ+ +G + Q QA + KA DQ + A Y L +Y +G+ +
Sbjct: 152 AAEQGNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMYDSGEGIT 211
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD AL + +A+++G A + G VP+ + AA + A+ + N
Sbjct: 212 KDSGQALAWYRKAADQGKIEAQYNLAVMYRDGAGVPKDGAQAVTWFRKAADQGDADAQYN 271
Query: 236 L 236
L
Sbjct: 272 L 272
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD + A+Y L ++ A AA+ GD +A+Y LG R +
Sbjct: 261 ADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVAK 320
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
+ +A + EKA + + A LG +Y GD V D A +L F RA
Sbjct: 321 NGPEAVGWFEKAAAENYADAALNLGVMYRDGDGVPADRAKSLEWFSRA 368
>gi|290975767|ref|XP_002670613.1| predicted protein [Naegleria gruberi]
gi|284084174|gb|EFC37869.1| predicted protein [Naegleria gruberi]
Length = 497
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
G +++ A GD +AQYE+ + +QS+ QA + KA Q H A Y +G
Sbjct: 216 FGMENILELARQGDANAQYEVADLFL---NGMQSEYQALEWYLKAAKQDHAPAQYEVGNC 272
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKK 227
Y G KD++SAL F +++++ + A + G L GV+V + K AA+K
Sbjct: 273 YFFGRGTSKDLSSALEWFLKSADQEYPKALLMMGYLFENGVEVEKNFEKALEYYKKAAEK 332
Query: 228 ARANLESNL 236
++ L
Sbjct: 333 GDNQVKFTL 341
>gi|345869667|ref|ZP_08821624.1| serine/threonine protein kinase [Thiorhodococcus drewsii AZ1]
gi|343923050|gb|EGV33747.1| serine/threonine protein kinase [Thiorhodococcus drewsii AZ1]
Length = 981
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG +QSD QA + KA +Q + A Y LG + G K
Sbjct: 748 AAEQGHAAAQNSLGIAFFYGRGVIQSDHQALKWFHKAAEQGYIEAQYNLGLINTFGRGTK 807
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD + FH+A+ +GH A G + G V + ++ AA++ AN + N
Sbjct: 808 KDDQQSAEWFHKAASQGHTEAQYNLGIMYSEGRGVKKNQSQAARWYRKAAEQGFANAQYN 867
Query: 236 L 236
L
Sbjct: 868 L 868
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G +AQY LG ++ QA + KA +Q A Y LG +Y G V
Sbjct: 820 AASQGHTEAQYNLGIMYSEGRGVKKNQSQAARWYRKAAEQGFANAQYNLGIMYSEGRGVN 879
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD + A + +A+E+GHA A YG + G V + A+K+ A+ ++N
Sbjct: 880 KDQSQADHWYRKAAEQGHAQAQNNYGVKFMVGEGVGPDYYQAFLWFEKASKQGHADAQNN 939
Query: 236 L 236
L
Sbjct: 940 L 940
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG + DQQ+ + KA Q H A Y LG +Y G VK
Sbjct: 784 AAEQGYIEAQYNLGLINTFGRGTKKDDQQSAEWFHKAASQGHTEAQYNLGIMYSEGRGVK 843
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
K+ + A + +A+E+G A A G + G V + ++ + AA++ A ++N
Sbjct: 844 KNQSQAARWYRKAAEQGFANAQYNLGIMYSEGRGVNKDQSQADHWYRKAAEQGHAQAQNN 903
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 37/81 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ G + V QAF + EKA Q H A LG +Y G V
Sbjct: 892 AAEQGHAQAQNNYGVKFMVGEGVGPDYYQAFLWFEKASKQGHADAQNNLGMLYEFGLGVP 951
Query: 176 KDIASALWCFHRASEKGHAGA 196
D A + FH+A+ +GH GA
Sbjct: 952 ADHHQAAYWFHQAANQGHKGA 972
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G DAQ LG + E ++ DQ QA ++ KA +Q H A LG + G V
Sbjct: 712 AAEQGSADAQNNLGV-MHSEGRGIELDQHQASHWFRKAAEQGHAAAQNSLGIAFFYGRGV 770
Query: 175 KKDIASALWCFHRASEKGH 193
+ AL FH+A+E+G+
Sbjct: 771 IQSDHQALKWFHKAAEQGY 789
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQ LG + DQQA + KA +Q A LG ++ G ++
Sbjct: 676 AAEQGNADAQNNLGVMYANGLGITKDDQQAVEWYRKAAEQGSADAQNNLGVMHSEGRGIE 735
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D A F +A+E+GHA A + G G V
Sbjct: 736 LDQHQASHWFRKAAEQGHAAAQNSLGIAFFYGRGV 770
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G AQY LG + D+QA + KA +Q + A LG +Y G
Sbjct: 636 LFNKAAINGHAMAQYNLGVMYANGLGTTKDDRQAVEWYRKAAEQGNADAQNNLGVMYANG 695
Query: 172 DCVKKDIASALWCFHRASEKGHAGA 196
+ KD A+ + +A+E+G A A
Sbjct: 696 LGITKDDQQAVEWYRKAAEQGSADA 720
>gi|424043622|ref|ZP_17781245.1| cobalamin biosynthesis CobT VWA domain protein [Vibrio cholerae
HENC-03]
gi|408888151|gb|EKM26612.1| cobalamin biosynthesis CobT VWA domain protein [Vibrio cholerae
HENC-03]
Length = 936
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQ LG + Q D QA ++ KA DQ + A LG +Y G V +D A AL
Sbjct: 238 AQTNLGWMYEMGRGAPQDDTQAVFWYRKAADQGYARAENNLGVMYEEGKGVPQDDAQALS 297
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+ +A+E+G+A + G + G VP+ + + AA + A ++NL
Sbjct: 298 WYRKAAEQGYANGQVNLGWMYRNGKGVPQDDAQAVSWYRKAALQGSARGQTNL 350
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A+ GD AQ LG Q D +A Y+ +K+ Q H LG +Y G V
Sbjct: 122 ASEQGDALAQSNLGAMYEKGEGVPQDDTRAVYWYKKSAGQGHSRGQNNLGWMYEDGKGVS 181
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ + +A+E+G+A A G + G VP+ + + AA++ A ++N
Sbjct: 182 QDDTQAVYWYRKAAEQGYAKAQTNLGWMYKVGRGVPQDDKQAVSWYRKAAEQEFARAQTN 241
Query: 236 L 236
L
Sbjct: 242 L 242
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG Q D QA Y+ KA +Q + LG++Y G +
Sbjct: 50 AAEQGYARAQVNLGWMYEGGKGVPQDDTQAVYWYRKAAEQEYARGQNNLGSMYDGGKGIP 109
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
D A++ + +ASE+G A A G++ +G VP+ T+ +A + + ++N
Sbjct: 110 LDDTKAVYWYGKASEQGDALAQSNLGAMYEKGEGVPQDDTRAVYWYKKSAGQGHSRGQNN 169
Query: 236 LMNPVEKAK 244
L E K
Sbjct: 170 LGWMYEDGK 178
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG +V Q D+QA + KA +Q A LG +Y G
Sbjct: 194 AAEQGYAKAQTNLGWMYKVGRGVPQDDKQAVSWYRKAAEQEFARAQTNLGWMYEMGRGAP 253
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ + +A+++G+A A G + G VP+ + + AA++ AN + N
Sbjct: 254 QDDTQAVFWYRKAADQGYARAENNLGVMYEEGKGVPQDDAQALSWYRKAAEQGYANGQVN 313
Query: 236 L 236
L
Sbjct: 314 L 314
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG + Q D +A Y+ KA +Q + A LG +Y G V
Sbjct: 14 AAEQGYARAQTNLGWMHKSGRGGPQDDTKAVYWYRKAAEQGYARAQVNLGWMYEGGKGVP 73
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A++ + +A+E+ +A GS+ G +P TK A+++ A +SN
Sbjct: 74 QDDTQAVYWYRKAAEQEYARGQNNLGSMYDGGKGIPLDDTKAVYWYGKASEQGDALAQSN 133
Query: 236 LMNPVEKAK 244
L EK +
Sbjct: 134 LGAMYEKGE 142
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G Q LG R Q D QA Y+ KA DQ + A LG +Y G V
Sbjct: 338 AALQGSARGQTNLGWMYRNGKGVPQDDAQAVYWYRKAADQGYARAESNLGWMYEEGKGVP 397
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G G + G VP+ + + AA + A ++N
Sbjct: 398 QDDEQAVSWYRKAAEQGDERGQANLGWMYKEGKGVPQDYEQAVSWYRKAAGQGYALAQNN 457
Query: 236 LMNPVEKAK 244
L E+ K
Sbjct: 458 LGIMYEEGK 466
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 5/153 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G Q LG Q D QA Y+ KA +Q + A LG +Y G V
Sbjct: 158 SAGQGHSRGQNNLGWMYEDGKGVSQDDTQAVYWYRKAAEQGYAKAQTNLGWMYKVGRGVP 217
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+ A A G + G P+ T+ AA + A E+N
Sbjct: 218 QDDKQAVSWYRKAAEQEFARAQTNLGWMYEMGRGAPQDDTQAVFWYRKAADQGYARAENN 277
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
L E+ K + AQA L W ++ E+
Sbjct: 278 LGVMYEEGKGVPQDDAQA-----LSWYRKAAEQ 305
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%)
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+Q D++A Y+ KA +Q + A LG ++ +G +D A++ + +A+E+G+A A +
Sbjct: 1 MQDDKKAVYWYAKAAEQGYARAQTNLGWMHKSGRGGPQDDTKAVYWYRKAAEQGYARAQV 60
Query: 199 AYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAK 244
G + G VP+ T+ AA++ A ++NL + + K
Sbjct: 61 NLGWMYEGGKGVPQDDTQAVYWYRKAAEQEYARGQNNLGSMYDGGK 106
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 17/178 (9%)
Query: 75 FELALEADNSNTHARYWLSK------------LHLKYH----VPGACKAMGAALLVDAAN 118
+E+ A +T A +W K L + Y VP A + AA
Sbjct: 246 YEMGRGAPQDDTQAVFWYRKAADQGYARAENNLGVMYEEGKGVP-QDDAQALSWYRKAAE 304
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
G + Q LG R Q D QA + KA Q LG +Y G V +D
Sbjct: 305 QGYANGQVNLGWMYRNGKGVPQDDAQAVSWYRKAALQGSARGQTNLGWMYRNGKGVPQDD 364
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
A A++ + +A+++G+A A G + G VP+ + + AA++ ++NL
Sbjct: 365 AQAVYWYRKAADQGYARAESNLGWMYEEGKGVPQDDEQAVSWYRKAAEQGDERGQANL 422
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG +Q D+QA + KA +Q + LG +Y G V
Sbjct: 482 AAEQGYALAQNNLGLMYEEGKGVLQDDKQAVSWYRKAAEQGYARGQTNLGWMYEEGRGVP 541
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+EK A + G + G VP + + +A++ A+ +++
Sbjct: 542 QDNKQAVSWYRKAAEKDDATGQVYLGWMYEEGKGVPRDNKQAVSWYRKSAEQGDADAQNS 601
Query: 236 LMNPVEKAK----------EQFEVAAQAGCNLGLRWLQRIEEEEKRLLTESSR 278
L E+ K + AA+ G LG L R+ +E K + + ++
Sbjct: 602 LGFMYEEGKGVLQDYKQAVSWYRKAAEQGSALGQSNLGRMYKEGKGVPRDDTQ 654
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG Q D QA + +KA +Q + A LG +Y G V
Sbjct: 446 AAGQGYALAQNNLGIMYEEGKGVPQDDIQAVSWYKKAAEQGYALAQNNLGLMYEEGKGVL 505
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
+D A+ + +A+E+G+A G + G VP+ N + VS +KA
Sbjct: 506 QDDKQAVSWYRKAAEQGYARGQTNLGWMYEEGRGVPQD----NKQAVSWYRKA 554
>gi|409912901|ref|YP_006891366.1| hypothetical protein KN400_2395 [Geobacter sulfurreducens KN400]
gi|298506484|gb|ADI85207.1| TPR-related repeat protein [Geobacter sulfurreducens KN400]
Length = 252
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%)
Query: 103 GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALY 162
GA A G A AA GD A + L + + +A Y++ A ++ H A Y
Sbjct: 28 GAKAANGYAATQAAARRGDAKAAFRLALMHLDGSGAPRKPTEAARYMKMAAERGHVRAQY 87
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
LGT Y G VK+D A+A +A+ G A A AYG +LL G VP
Sbjct: 88 YLGTFYHEGTGVKRDTAAAARWIGKAAAGGDAEAQYAYGMVLLSGDGVP 136
>gi|238912413|ref|ZP_04656250.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 722
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 91/228 (39%), Gaps = 27/228 (11%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL 112
E NDR +P + KE E A + D Y K + + P
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDKELSELYAP--------TD 558
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ + A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y GD
Sbjct: 559 VTNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAYNDGD 614
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARA 230
V +D L +A+E G + A + G L L G +P+ L + K+ + ARA
Sbjct: 615 GVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNARA 674
Query: 231 NLESNLM--------NPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEK 270
+ LM + KAK A + G L L+ + + K
Sbjct: 675 HYNLGLMYRNGDGVEKDLNKAKLHLTAAVKGGVKPALAALKELTPQTK 722
>gi|237746442|ref|ZP_04576922.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377793|gb|EEO27884.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 237
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
FE A +A NT A+ + L+ K + + A AA G DAQ +G + +
Sbjct: 73 FEKAAKA--GNTEAQTMMGVLYFKGNGVEKDDSQAARWFEKAAKAGHADAQTFIGV-MNL 129
Query: 135 ENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
E + ++ ++A + EKA A LGT YL G +D A++ F RA+E G
Sbjct: 130 EGQGIPKNGKKALEWFEKAAQAGETNAQNYLGTAYLKGTETAQDTGKAVYWFTRAAEAGD 189
Query: 194 AGAAIAYGSLLLRG 207
+ A+ G+L L G
Sbjct: 190 SNASKILGALYLNG 203
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +AQ +G N + D QA + EKA H A +G + L G +
Sbjct: 76 AAKAGNTEAQTMMGVLYFKGNGVEKDDSQAARWFEKAAKAGHADAQTFIGVMNLEGQGIP 135
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K+ AL F +A++ G A G+ L+G + + K
Sbjct: 136 KNGKKALEWFEKAAQAGETNAQNYLGTAYLKGTETAQDTGK 176
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 26/106 (24%)
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
EKA + A ++G +Y G+ V+KD + A F +A++ GHA A G + L G
Sbjct: 73 FEKAAKAGNTEAQTMMGVLYFKGNGVEKDDSQAARWFEKAAKAGHADAQTFIGVMNLEGQ 132
Query: 209 QVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAG 254
+P+ N K KA E FE AAQAG
Sbjct: 133 GIPK-----NGK---------------------KALEWFEKAAQAG 152
>gi|303289691|ref|XP_003064133.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454449|gb|EEH51755.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 357
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
LV AA +GD AQ CR+ E + + + A + +KA Q + A+ LG +Y G
Sbjct: 133 LVKAAELGDAKAQ----CRIGSEYNQMSNYDAARKWFDKAAAQGNADAMNNLGALYYKGQ 188
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V+K+I++A + +A+ KG++ A YG+LL + E K K AA + AN
Sbjct: 189 GVEKNISTAAEWYLKAAMKGNSHAQYTYGALLDIDMNQHEDAMKWYLK---AAAQGDANA 245
Query: 233 ESNLM----------NPVEKAKEQFEVAAQAG-----CNLG 258
+NL V A E F AA G CN G
Sbjct: 246 MNNLALLYFNGKGVERNVSTAAEWFLKAASKGDREAQCNYG 286
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A + AA G+ AQY G L + D Q + +Y+ KA Q A+ L +Y
Sbjct: 198 AEWYLKAAMKGNSHAQYTYGALLDI--DMNQHEDAMKWYL-KAAAQGDANAMNNLALLYF 254
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
G V++++++A F +A+ KG A YG++L + E K K AA +
Sbjct: 255 NGKGVERNVSTAAEWFLKAASKGDREAQCNYGNILFEEMGQYEDAMKWYMK---AAAQGH 311
Query: 230 ANLESNL------MNPVEK----AKEQFEVAAQAGC 255
A N+ + VE+ A+E +E AA GC
Sbjct: 312 AEATHNIGTLYFRGDGVEQNKWTAREWWEKAAAYGC 347
>gi|222053397|ref|YP_002535759.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221562686|gb|ACM18658.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 255
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G AQ+ LG L + + V D +AF + +A Q A Y LG +Y GD V
Sbjct: 89 AANGGHASAQFNLGL-LYLNGEGVAKDLGEAFCWFSRAAAQGDARAQYNLGLMYARGDGV 147
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D+A+ L F A+E+G+ A I G L RG V
Sbjct: 148 AEDMAATLNWFRLAAEQGYVKAQIYLGGLYARGEGV 183
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 120 GDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
GD + G + + + VQ D +A + ++A + H A + LG +YL G+ V KD+
Sbjct: 57 GDSAGDFAAGV-MHYKGEGVQRDPAEAAVWFQRAANGGHASAQFNLGLLYLNGEGVAKDL 115
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL-TKLNAKRVSA 224
A F RA+ +G A A G + RG V E + LN R++A
Sbjct: 116 GEAFCWFSRAAAQGDARAQYNLGLMYARGDGVAEDMAATLNWFRLAA 162
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A+ + A++ L L+L + G K +G A AA GD AQY LG + D
Sbjct: 90 ANGGHASAQFNLGLLYL--NGEGVAKDLGEAFCWFSRAAAQGDARAQYNLGL-MYARGDG 146
Query: 139 VQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
V D A + A +Q + A LG +Y G+ V+KD A+ F A+E+ A
Sbjct: 147 VAEDMAATLNWFRLAAEQGYVKAQIYLGGLYARGEGVEKDRREAVRWFRMAAEQESTEAQ 206
Query: 198 IAYGSLLLRGVQV 210
+ G + +G V
Sbjct: 207 VYLGVMYTKGDGV 219
>gi|420157155|ref|ZP_14663995.1| Sel1 repeat protein [Clostridium sp. MSTE9]
gi|394757165|gb|EJF40224.1| Sel1 repeat protein [Clostridium sp. MSTE9]
Length = 1125
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 78 ALEADNSNTHARYWLSKLHLKYHVP------GACKAMGAALLVD----------AANMGD 121
A+ + N A W SK + + P G C G + D AA G
Sbjct: 501 AIGVEEDNEEAVRWFSKAAEQ-NFPRAQCLLGECYENGYGVETDKAKAMELYRLAAEQGH 559
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
AQ LG + +++++A + KA D+ +P A LLG Y G V++D+ A
Sbjct: 560 TPAQCNLGFFYYIGIGIEENNEEAVRWFTKAADKNYPRAQNLLGECYENGYGVERDLTRA 619
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+H+A+E+G+A A G+ GV V
Sbjct: 620 REFYHKAAEQGYAPAQCNLGNFYYYGVMV 648
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A+ + A++W+ + + + H G K + A+ AA D A LG R + N
Sbjct: 879 AEQEHPRAQFWMGQCYERGH--GTEKNLEKAIHWYQLAAEQEDGIALNTLGNRYKDGNGV 936
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
Q ++AF E+AV + L LG Y G+ V+KD+ A+ F +A EKG +
Sbjct: 937 KQDYKKAFELYERAVAAGNSAGLVNLGRAYRYGEGVEKDLEKAVSLFRQAVEKGR---DV 993
Query: 199 AYGSL 203
AYG+L
Sbjct: 994 AYGNL 998
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+ +++A + KA +Q P A LLG Y G V+ D A A+ + A+E+GH A
Sbjct: 506 EDNEEAVRWFSKAAEQNFPRAQCLLGECYENGYGVETDKAKAMELYRLAAEQGHTPAQCN 565
Query: 200 YGSLLLRGVQVPE-------CLTKLNAKRVSAAKKARANLESN---LMNPVEKAKEQFEV 249
G G+ + E TK K A+ N + + +A+E +
Sbjct: 566 LGFFYYIGIGIEENNEEAVRWFTKAADKNYPRAQNLLGECYENGYGVERDLTRAREFYHK 625
Query: 250 AAQAG-----CNLG 258
AA+ G CNLG
Sbjct: 626 AAEQGYAPAQCNLG 639
Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G P AQ LG + QAFY+ K+ +Q HP A + +G Y G +
Sbjct: 842 SAEQGYPRAQSNLGDCYYFGTGIEEDKDQAFYWFSKSAEQEHPRAQFWMGQCYERGHGTE 901
Query: 176 KDIASALWCFHRASEK 191
K++ A+ + A+E+
Sbjct: 902 KNLEKAIHWYQLAAEQ 917
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + +A G AQ LG + +++A + KA ++ HP A LLG Y G
Sbjct: 298 LYLLSAEQGYAPAQCNLGYLYYTGTGVKEDNEEAARWFSKAAEKKHPRAQCLLGLCYENG 357
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V++D A A + + E+G+A A G GV V E
Sbjct: 358 YGVEEDKAKAAELYRLSGEQGYAPAQCNLGYFYYTGVGVEE 398
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD AQY LG + VE DY ++A +A DQ P A LG Y G
Sbjct: 86 AAEQGDVSAQYNLGACYENGIGVEQDY----EKAVSLYREAADQDFPSAQCALGLCYEIG 141
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V+ D A+ + ++E+ +A A G G+ V E
Sbjct: 142 QGVEMDKDKAMELYLLSAEQDYAPAQCNLGFFYYHGIAVEE 182
>gi|385763713|gb|AFI78542.1| Sel1 domain protein repeat-containing protein [uncultured bacterium
ws172H5]
Length = 149
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A+ GD +AQ+ L + Q+D A ++ A +Q H A + +G +Y+ G
Sbjct: 35 LLSPYADQGDAEAQHRLAIMYQNGLGVAQNDATAVKWMLAAAEQGHALAQHGMGFMYMEG 94
Query: 172 DCVKKDIASALWCFHRASEKGHAGA 196
+CV+KD A A+ F A+E+G AG+
Sbjct: 95 ECVEKDPAEAVKWFRLAAEQGLAGS 119
>gi|126640192|ref|YP_001083176.1| signal peptide [Acinetobacter baumannii ATCC 17978]
Length = 183
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
L E V++ +QAF ++ A GA Y LG +Y TG V+KD+ A F +A++K
Sbjct: 3 LTGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADK 62
Query: 192 GHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAA 251
GHA A G L RG + + AA++ E NL + +K +
Sbjct: 63 GHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDE 122
Query: 252 QAGCNLGLRWLQRIEE 267
QA L+W + E
Sbjct: 123 QA-----LKWYTKAAE 133
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 67 LLKTAKENFELALEAD-NSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPD 123
++K ++ F+ AD N + A+Y L ++ G K M A AA+ G
Sbjct: 9 VVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFT--GTGVEKDMKRAFEYFAKAADKGHAK 66
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY LG Q+ +QAF + +A +Q +P A Y L +Y G V + AL
Sbjct: 67 AQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALK 126
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
+ +A+E + A + L G P+ L
Sbjct: 127 WYTKAAEHNESDAQYNLAQMYLNGEGTPKNL 157
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A G A+Y LG + ++AF Y KA D+ H A Y LG +Y G+
Sbjct: 20 LTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGVLYDRGE 79
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
++ A + RA+E+G+ A L +G V + + AA+ ++
Sbjct: 80 GTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAEHNESDA 139
Query: 233 ESNLM--------NP--VEKAKEQFEVAAQAG 254
+ NL P ++ AK+ F+ AA AG
Sbjct: 140 QYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 171
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 69 KTAKENFE-LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
K K FE A AD + A+Y L L+ + AA G P A+Y
Sbjct: 47 KDMKRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYN 106
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
L + + QSD+QA + KA + A Y L +YL G+ K++ A F +
Sbjct: 107 LAHLYKKGHGVAQSDEQALKWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQ 166
Query: 188 ASEKGHAGA 196
A++ G + A
Sbjct: 167 AADAGDSDA 175
>gi|54297265|ref|YP_123634.1| hypothetical protein lpp1310 [Legionella pneumophila str. Paris]
gi|397666972|ref|YP_006508509.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
gi|53751050|emb|CAH12461.1| hypothetical protein lpp1310 [Legionella pneumophila str. Paris]
gi|395130383|emb|CCD08623.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
Length = 376
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD +Y LG + + +D +A FY+ +A + H A L YL G V
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
D A + + A+EKG A G LLL G V + + +A +
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQG------ 299
Query: 235 NLMNPVEKAKEQFEVAAQAGCNLGL----RWLQ-----RIEEEEKRL------LTESSRI 279
NPV +AK + A G N L WL+ + EE K+L LTE ++
Sbjct: 300 ---NPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSLEAKLTEPEKL 356
Query: 280 E 280
E
Sbjct: 357 E 357
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+ AA G+P AQ +G + SD +AF + +KA +Q + A LG Y+ G
Sbjct: 112 MKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 174 VKKDIASALWCFHRASEKG 192
KD+ A + +A+E+G
Sbjct: 172 TPKDVKKAFEWYQKAAEQG 190
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ + AQ LG Q +AF + KA +Q +P A +G +Y TGD V
Sbjct: 78 AADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVA 137
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A F +A+E+G++ A + G + G P+ + K
Sbjct: 138 ASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRL----RVEN 136
A++ + +A+ +L+ +LK + A A AA G P+AQ +LG L V+
Sbjct: 224 ANHGHVNAQTYLAYYYLKGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDK 283
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
DY QQA Y+ K+ Q +P LG +YL G V K + A A+E
Sbjct: 284 DY----QQAAYWFGKSAHQGNPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAE 333
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA G+ +A Y LG + + ++A + +KA D+ + A LG +Y TG
Sbjct: 39 LMQAAKEGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGK 98
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP----ECLTKLNAKRVSAAKKA 228
V +D A A + +A+E+G+ A G + G V + T KA
Sbjct: 99 GVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKA 158
Query: 229 RANLESNLM------NPVEKAKEQFEVAAQAGCNLG 258
+ NL M V+KA E ++ AA+ G G
Sbjct: 159 QVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG 194
>gi|290983676|ref|XP_002674554.1| predicted protein [Naegleria gruberi]
gi|284088145|gb|EFC41810.1| predicted protein [Naegleria gruberi]
Length = 889
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHV--PGACKAMGAALLVDAANMGDPDAQYELGCRL 132
F+LA E DN++ A ++L ++ K V CKA +A G P+AQ+ +G +
Sbjct: 621 FQLAAEKDNAS--AEHFLGIMYHKGQVVEQDFCKAF--EWFGKSAEKGYPEAQFSIGL-M 675
Query: 133 RVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
+YV +++ FY+I +A +Q H A + +Y +++ + + + +A+EK
Sbjct: 676 YYHGEYVSKNKEREFYWIYRAAEQGHVKAESSIACLYYA----QEEYSKSFEWYLKAAEK 731
Query: 192 GHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G + + GSL +G+ +P+ T + AA+ + ++N+
Sbjct: 732 GDSDSQFEIGSLYHKGLGIPKDFTNAFSWYSKAAEHGHSKAQNNI 776
>gi|340362624|ref|ZP_08684996.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339887146|gb|EGQ76732.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 286
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ + A GD +Q +LG Q +QA Y+ EKA + A + LG +Y G
Sbjct: 45 LIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAEAQFNLGIIYYEG 104
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A + + +A+E+G+A AA G + G+ VP+
Sbjct: 105 QGTAQDYRQAKFWWEKAAEQGNAEAAFNLGIIHYAGIGVPQ 145
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYEL 128
AK FE A DN+ A++ L ++ Y G + A AA G+ +A + L
Sbjct: 78 AKYWFEKAAHNDNA--EAQFNLGIIY--YEGQGTAQDYRQAKFWWEKAAEQGNAEAAFNL 133
Query: 129 G----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
G + V DY+Q+ + KA DQ A + LG +Y +G+ V +D A
Sbjct: 134 GIIHYAGIGVPQDYIQAKT----WFHKAADQGEDSAQFYLGLMYYSGEGVVQDYKLAKSW 189
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL-------- 236
F +A++KG+A A G + G V + K AA++ AN ++NL
Sbjct: 190 FEKAAKKGNAKAQYNLGIMYAEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGVLYENGQ 249
Query: 237 --MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKR 271
+AK FE AA G L L+ I ++ +
Sbjct: 250 GVTQNFTQAKSWFEKAAAQGNTLAQHALEYIVQQNQN 286
>gi|417518043|ref|ZP_12180488.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353650150|gb|EHC92596.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
Length = 288
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ LG QSD+QA + KA Q A Y LG Y TG V
Sbjct: 121 AARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGSGVP 180
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ-VPE 212
++ +AL + +A+E+G A +A G + G Q VP+
Sbjct: 181 ENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPK 218
>gi|296284817|ref|ZP_06862815.1| hypothetical protein CbatJ_14411 [Citromicrobium bathyomarinum
JL354]
Length = 304
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYY-IEKAVDQLHPGALYLLGTV 167
G AL AA G+ AQ +LG L + Y + D A Y +EKA Q A YLLG +
Sbjct: 149 GLALCRQAATAGNAHAQTDLGGYL-LMGQYTKRDPVAARYCLEKAGAQDQANASYLLGQI 207
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAI-AYGSLLLRG 207
Y GD V +D+A A F RA G A AA + +L RG
Sbjct: 208 YQKGDGVDRDLAKAQSWFERAHAHGRADAAFRVFQTLFQRG 248
>gi|242019138|ref|XP_002430022.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515084|gb|EEB17284.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 499
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTG 171
+ AA+ G+P A LG + +D V+ D + A+ Y +KA D +P LG +YL G
Sbjct: 272 FLQAADAGNPIAMAFLG---KARSDIVKQDNETAYKYFKKAADLGNPVGQSGLGLMYLYG 328
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+KKD AL F +A+E+G + G++ G+ V
Sbjct: 329 KGIKKDYNKALKYFSQAAEQGWVDGQLQLGNMYFSGLGV 367
>gi|357405672|ref|YP_004917596.1| beta-lactamase [Methylomicrobium alcaliphilum 20Z]
gi|351718337|emb|CCE24006.1| putative Beta-lactamase [Methylomicrobium alcaliphilum 20Z]
Length = 385
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG ++ Q QA ++ KA DQ + GA LG Y G V+
Sbjct: 183 AAEAGLAGAQYNLGLKIEYGLGVKQDAIQAVFWYRKAADQGYAGAQCNLGLNYECGYGVE 242
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++ A + + RA+E+G+A A I G+L GV V
Sbjct: 243 QNTVQAAFWYRRAAEQGYAYAQIELGALYEFGVGV 277
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ ELG + +QA ++ KA +Q HP A LG +Y G V
Sbjct: 255 AAEQGYAYAQIELGALYEFGVGVARDGEQAAFWYRKAAEQGHPYAQDFLGELYWAGFGVA 314
Query: 176 KDIASALWCFHRASEKG 192
+D A++ + +A+++G
Sbjct: 315 QDYEKAVFWYRQAADQG 331
>gi|386598823|ref|YP_006100329.1| hypothetical protein ECOK1_1122 [Escherichia coli IHE3034]
gi|294491583|gb|ADE90339.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 346
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +AQ+ LG Q+ +QA + EKA Q A Y LG +Y G V
Sbjct: 184 AAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVT 243
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLE 233
+ A + F +A+EKGH A G + G V + + A ++ ++ A+A E
Sbjct: 244 QSYRQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE 303
Query: 234 SNLMN--------PVEKAKEQFEVAAQAGCNLGLR 260
+MN +++A+ +E + CN GL+
Sbjct: 304 LGVMNELGQGESIDLKQARHYYERS----CNNGLK 334
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ+ LG N Q QQA + EKA +Q A + LG +Y G+ VK
Sbjct: 148 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVK 207
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A F +A+ + A G + G V + + AA+K + + N
Sbjct: 208 QNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAEKGHVDAQYN 267
Query: 236 L 236
L
Sbjct: 268 L 268
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A GD +AQY LG + + + + D QQA + EKA DQ P A LG +Y G V
Sbjct: 4 AGENGDVEAQYALGL-MYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANGLGV 62
Query: 175 KKDI-ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL--TKLNAKRVSAAKKARAN 231
+D S LW + +A+ + A G + G+ V + K+ ++ +A RA
Sbjct: 63 NQDYQQSKLW-YEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQ 121
Query: 232 LESNLM----NPVE----KAKEQFEVAA 251
+ ++ N VE +AK +E AA
Sbjct: 122 VNLAVLYAKGNGVEQDYRQAKSWYEKAA 149
>gi|46201378|ref|ZP_00055134.2| COG0790: FOG: TPR repeat, SEL1 subfamily [Magnetospirillum
magnetotacticum MS-1]
Length = 389
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 43/215 (20%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
++L L SN HA W +AA GDP AQ+ LG ++
Sbjct: 200 YDLGLGVAQSNAHALKWYR---------------------EAAKQGDPQAQFNLGNMIQQ 238
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
S + A + ++A +Q GA++ LG +Y G V++D A+ + +A+++G A
Sbjct: 239 GRGVESSAEVAAKWFKQAAEQGDAGAIFALGALYEAGSGVERDETQAVELYRQAADQGLA 298
Query: 195 GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAG 254
A ++L +G +A AA R E L A+ Q+ AA
Sbjct: 299 LALHNLSNMLRQG-------RGTDADPTEAAMMCRRAAEQGL------AEAQYNYAAMLA 345
Query: 255 CNLG--------LRWLQRIEEE-EKRLLTESSRIE 280
LG +RW +R + + R T+++ +E
Sbjct: 346 LGLGVDKDEEAAIRWFRRAAKSGDPRAETQAAALE 380
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA D Q+ LG + QS+ A + +A Q P A + LG + G V+
Sbjct: 184 AAKANDARGQFSLGVMYDLGLGVAQSNAHALKWYREAAKQGDPQAQFNLGNMIQQGRGVE 243
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
A F +A+E+G AGA A G+L G V
Sbjct: 244 SSAEVAAKWFKQAAEQGDAGAIFALGALYEAGSGV 278
>gi|56551033|ref|YP_161872.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542607|gb|AAV88761.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQY+LG Q ++A ++ +KA DQ + A + LG Y G V
Sbjct: 185 AADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWWQKAADQGYAAAQFNLGNAYYQGAGVP 244
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D A A++ + +A+++G+A A G VP+ K
Sbjct: 245 QDYAKAVFWYQKAADQGYADAQFNLGDAYHDEEGVPQDYAK 285
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQY LG + ++A + +KA Q A Y LG Y G V
Sbjct: 113 AAGQGNTAAQYVLGSAYYQGKGIPRDYEKAALWWQKAAGQGDAAAQYDLGNAYYQGAGVP 172
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A AL + +A+++GHA A GS +G VP+ K AA + A + N
Sbjct: 173 RDYAKALSWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWWQKAADQGYAAAQFN 232
Query: 236 LMN 238
L N
Sbjct: 233 LGN 235
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+ +KA DQ H A Y LG+ Y G V + A++ + +A+++G+A A G+ +G
Sbjct: 181 WYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWWQKAADQGYAAAQFNLGNAYYQG 240
Query: 208 VQVPECLTKLNAKRVSAAKKARANLESNLMN 238
VP+ K AA + A+ + NL +
Sbjct: 241 AGVPQDYAKAVFWYQKAADQGYADAQFNLGD 271
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 113 LVDAANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
L + A GD DAQY LG V+ DY ++ AF+Y +KA DQ A Y LG+ Y
Sbjct: 38 LQEKAETGDADAQYALGGAYYQGKGVQRDY---EKAAFWY-QKAADQGKAEAQYDLGSAY 93
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V + A + +A+ +G+ A GS +G +P K
Sbjct: 94 YQGKGVPQGYEKAALWWQKAAGQGNTAAQYVLGSAYYQGKGIPRDYEK 141
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G DAQ+ LG E Q +A ++ +KA DQ A LG Y G V
Sbjct: 257 AADQGYADAQFNLGDAYHDEEGVPQDYAKAVFWYQKAADQGDAAAQNNLGVAYARGAGVP 316
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A++ + +A+++G A A A G+ +G VP+ K AA + E N
Sbjct: 317 QDRAKAVFWYQKAADQGDANAQYALGNAYYQGAGVPQSHEKAVFWWQKAADQGFVAAEYN 376
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLTES 276
L K + +A G G WLQ+ +++ E+
Sbjct: 377 LGVAYLKGQ---GIAQDKG--RGQFWLQKAADKDDEAAKEA 412
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQ+ LG Q +A ++ +KA DQ + A + LG Y + V
Sbjct: 221 AADQGYAAAQFNLGNAYYQGAGVPQDYAKAVFWYQKAADQGYADAQFNLGDAYHDEEGVP 280
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A++ + +A+++G A A G RG VP+ K AA + AN +
Sbjct: 281 QDYAKAVFWYQKAADQGDAAAQNNLGVAYARGAGVPQDRAKAVFWYQKAADQGDANAQYA 340
Query: 236 LMNPV-----------------EKAKEQFEVAAQAGCNLGLRWL--QRIEEEEKR 271
L N +KA +Q VAA+ NLG+ +L Q I +++ R
Sbjct: 341 LGNAYYQGAGVPQSHEKAVFWWQKAADQGFVAAE--YNLGVAYLKGQGIAQDKGR 393
>gi|423107917|ref|ZP_17095612.1| hypothetical protein HMPREF9687_01163 [Klebsiella oxytoca 10-5243]
gi|376386650|gb|EHS99361.1| hypothetical protein HMPREF9687_01163 [Klebsiella oxytoca 10-5243]
Length = 657
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 69 KTAKENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPD 123
+ +N+ LALE A NT A+Y L +L+ A L AAN D
Sbjct: 450 RMVDKNYSLALEWFSQAARQGNTLAQYNLGQLYSNNETGLADYPKALYWLTQAANQNYGD 509
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCVKKDIASAL 182
AQ++LG D Q+ +A ++ A + A LLG++YL G V D + +L
Sbjct: 510 AQFKLGFLYFAGEDIPQNMPEAIRWLTCASRHHYVDAFNLLGSIYLGGHGGVPVDYSQSL 569
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ + +A+++GH A + GV E
Sbjct: 570 FWYEKAAKRGHTSAQNLVAFMYANGVGTEE 599
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQY LG R + VQ DQQA +++K+ +Q A Y LG +Y
Sbjct: 357 AAKQGDADAQYALGLCYRNGSGTVQDDQQALVWLQKSAEQGKAIARYELGRLYYDAASPH 416
Query: 176 -KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A AL +A+++G A A + G+L G V
Sbjct: 417 LRDGALALHWLGKAAQQGLAFAQNSLGTLYYEGRMV 452
>gi|91210161|ref|YP_540147.1| hypothetical protein UTI89_C1133 [Escherichia coli UTI89]
gi|386605031|ref|YP_006111331.1| hypothetical protein UM146_12250 [Escherichia coli UM146]
gi|432553054|ref|ZP_19789783.1| hypothetical protein A1S3_01445 [Escherichia coli KTE47]
gi|432573037|ref|ZP_19809527.1| hypothetical protein A1SI_01731 [Escherichia coli KTE55]
gi|91071735|gb|ABE06616.1| hypothetical protein UTI89_C1133 [Escherichia coli UTI89]
gi|307627515|gb|ADN71819.1| hypothetical protein UM146_12250 [Escherichia coli UM146]
gi|431085771|gb|ELD91875.1| hypothetical protein A1S3_01445 [Escherichia coli KTE47]
gi|431110245|gb|ELE14172.1| hypothetical protein A1SI_01731 [Escherichia coli KTE55]
Length = 378
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +AQ+ LG Q+ +QA + EKA Q A Y LG +Y G V
Sbjct: 216 AAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVT 275
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLE 233
+ A + F +A+EKGH A G + G V + + A ++ ++ A+A E
Sbjct: 276 QSYRQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE 335
Query: 234 SNLMN--------PVEKAKEQFEVAAQAGCNLGLR 260
+MN +++A+ +E + CN GL+
Sbjct: 336 LGVMNELGQGESIDLKQARHYYERS----CNNGLK 366
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ+ LG N Q QQA + EKA +Q A + LG +Y G+ VK
Sbjct: 180 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVK 239
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A F +A+ + A G + G V + + AA+K + + N
Sbjct: 240 QNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAEKGHVDAQYN 299
Query: 236 L 236
L
Sbjct: 300 L 300
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A GD +AQY LG + + + + D QQA + EKA DQ P A LG +Y G
Sbjct: 33 LKSAGENGDVEAQYALGL-MYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANG 91
Query: 172 DCVKKDI-ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL--TKLNAKRVSAAKKA 228
V +D S LW + +A+ + A G + G+ V + K+ ++ +A
Sbjct: 92 LGVNQDYQQSKLW-YEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHAKMWYEKAAAQNDE 150
Query: 229 RANLESNLM----NPVE----KAKEQFEVAA 251
RA + ++ N VE +AK +E AA
Sbjct: 151 RAQVNLAVLYAKGNGVEQDYRQAKSWYEKAA 181
>gi|149200919|ref|ZP_01877894.1| Sel1-like repeat [Roseovarius sp. TM1035]
gi|149145252|gb|EDM33278.1| Sel1-like repeat [Roseovarius sp. TM1035]
Length = 548
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ +G L D + A +++ A Q H A Y LG + TGD V++
Sbjct: 389 AKQGDHFAQVFVGLSLWAGQDVAEDKLGAIKWMQDAARQGHMEAQYFLGVCFDTGDGVER 448
Query: 177 DIASALWCFHRASEKGHAGA--AIAYGSLLLRGVQ 209
D AL F A+E+GH + A+A+ SLL G +
Sbjct: 449 DRKEALGWFRLAAEQGHEDSQFALAHNSLLRDGTE 483
>gi|189500441|ref|YP_001959911.1| Sel1 domain-containing protein repeat-containing protein
[Chlorobium phaeobacteroides BS1]
gi|189495882|gb|ACE04430.1| Sel1 domain protein repeat-containing protein [Chlorobium
phaeobacteroides BS1]
Length = 528
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACK--AMGAALLVDAANMGDPDAQYELGCRLRV 134
+ AD +T A+++L +++ Y G K A L AA D AQ+ LG
Sbjct: 142 FGMAADQGHTRAQFFLGRMY--YSGEGVTKNHKTAARLFQLAAKNNDAKAQHNLGVMYAE 199
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
Q+ +A + K+ +Q P A + LG ++ G V ++ A A H ASEKGH
Sbjct: 200 GQGVEQNYTEAARWYRKSAEQGDPDAAFHLGMLFSGGRGVAQNNAEAFKWLHIASEKGHT 259
Query: 195 GAAIAYGSLLLRGV 208
A + + G
Sbjct: 260 QAQLQLAGMYETGT 273
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
KTA F+LA A N++ A++ L ++ + A +A GDPDA + L
Sbjct: 172 KTAARLFQLA--AKNNDAKAQHNLGVMYAEGQGVEQNYTEAARWYRKSAEQGDPDAAFHL 229
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G Q++ +AF ++ A ++ H A L +Y TG ++ AL + +A
Sbjct: 230 GMLFSGGRGVAQNNAEAFKWLHIASEKGHTQAQLQLAGMYETGTGTSQNSEEALKWYRKA 289
Query: 189 SEKGHAGAAIAYGSLLLR 206
+EKG A SLL +
Sbjct: 290 AEKGITQAQSKLDSLLSK 307
>gi|445496963|ref|ZP_21463818.1| Sel1 domain protein repeat-containing protein [Janthinobacterium
sp. HH01]
gi|444786958|gb|ELX08506.1| Sel1 domain protein repeat-containing protein [Janthinobacterium
sp. HH01]
Length = 461
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A L+ AA D DAQ+ LG L + D+ AF + +A + H A Y LG +Y
Sbjct: 231 AWLLRAAEQEDADAQFNLGIMLANGKGVDRDDELAFTWYRRAAESGHALAQYNLGGMYAR 290
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V++D AL + A+E+G A G + G V + + A AA++ A
Sbjct: 291 GRGVQRDEQRALEWYRMAAEQGAPNAQFNVGVMYANGQGVAKDEARAVAWYRCAAEQGDA 350
Query: 231 NLESNL 236
+ ++NL
Sbjct: 351 SAQNNL 356
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AA GDP AQ+ LG + D + D +AFY++ KA Q A LG +Y G V
Sbjct: 19 EAAERGDPYAQFNLGLVYKKGQDVARDDTRAFYWMLKAAQQGLAFAQNHLGVMYYNGRGV 78
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ A+ F A+ +G A G + +G V
Sbjct: 79 ASNDKEAVRWFRAAALQGEVSAQQNLGQMYKKGRGV 114
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G AQY LG + VQ D+Q A + A +Q P A + +G +Y G V
Sbjct: 272 AAESGHALAQYNLGG-MYARGRGVQRDEQRALEWYRMAAEQGAPNAQFNVGVMYANGQGV 330
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD A A+ + A+E+G A A G + G+ V
Sbjct: 331 AKDEARAVAWYRCAAEQGDASAQNNLGVMYAHGLGV 366
>gi|440226926|ref|YP_007334017.1| Sel1 repeat family [Rhizobium tropici CIAT 899]
gi|440038437|gb|AGB71471.1| Sel1 repeat family [Rhizobium tropici CIAT 899]
Length = 356
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ +T A++ + ++ + G K M AA G +AQY LG R +
Sbjct: 153 AEQGDTDAQFNVGTMYDQGDGTGKDKTMAVIWYRKAAEQGKVEAQYNLGIMYRDGEGVAK 212
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRAS 189
AF + +KA DQ A + +G +Y GD +K+D A A+ F +A+
Sbjct: 213 DSAAAFSWFKKAADQGDVSAQFNIGAMYADGDGIKQDQAEAIAWFLKAA 261
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 72 KENFELAL-----EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQY 126
K+N LAL AD N A++ + ++ + A K A +A G +AQY
Sbjct: 67 KKNLTLALGWYKKAADQGNAVAQFNVGTMYDQGEGVTADKGQAIAWYKKSAAQGYLNAQY 126
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
LG Q QAF + KA +Q A + +GT+Y GD KD A+ +
Sbjct: 127 NLGVVYDTGQGVAQDKPQAFAWYSKAAEQGDTDAQFNVGTMYDQGDGTGKDKTMAVIWYR 186
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
+A+E+G A G + G E + K +A S KKA
Sbjct: 187 KAAEQGKVEAQYNLGIMYRDG----EGVAKDSAAAFSWFKKA 224
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQ+ +G + + A + KA +Q A Y LG +Y G+ V
Sbjct: 152 AAEQGDTDAQFNVGTMYDQGDGTGKDKTMAVIWYRKAAEQGKVEAQYNLGIMYRDGEGVA 211
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+A F +A+++G A G++ G + + + A + AA + E N
Sbjct: 212 KDSAAAFSWFKKAADQGDVSAQFNIGAMYADGDGIKQDQAEAIAWFLKAAAQNDVEAEYN 271
Query: 236 L 236
L
Sbjct: 272 L 272
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD + A++ + ++ +A A + AA D +A+Y LG R +
Sbjct: 225 ADQGDVSAQFNIGAMYADGDGIKQDQAEAIAWFLKAAAQNDVEAEYNLGVMFRDGEGVAK 284
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ +A Y+ E+A + + GA Y L +Y GD V D A F +A G+ G
Sbjct: 285 NGHRAVYWFERAAEHRYAGAAYNLAMMYRDGDGVTADAGKAAEWFRKAKHLGYDGG 340
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ GD AQ+ +G + + D ++ DQ +A + KA Q A Y LG ++ G+ V
Sbjct: 224 AADQGDVSAQFNIGA-MYADGDGIKQDQAEAIAWFLKAAAQNDVEAEYNLGVMFRDGEGV 282
Query: 175 KKDIASALWCFHRASEKGHAGAA 197
K+ A++ F RA+E +AGAA
Sbjct: 283 AKNGHRAVYWFERAAEHRYAGAA 305
>gi|399116850|emb|CCG19661.1| conserved hypothetical protein [Taylorella asinigenitalis 14/45]
Length = 215
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 76 ELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE 135
E A+EA + A+Y L+ + + V L +AN G+ AQ++LG +
Sbjct: 89 EKAVEA--GDDQAQYNLASFYFRGDVVKQDLKKAGDLFEKSANQGNVKAQHDLGSMYLMG 146
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
Q ++A +++K+ + HPG+LY LG +Y G+ + +DI A F ++ + G
Sbjct: 147 QGKPQDIKKAAEWMQKSASKGHPGSLYNLGIMYKRGEGMPQDIGKAKEMFSKSCDIG 203
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ AQ +G L Q+ Q+ Y EKAV+ A Y L + Y GD VK
Sbjct: 55 AADQNHTVAQTNVGIMLIKGLGVDQNIQEGLKYTEKAVEAGDDQAQYNLASFYFRGDVVK 114
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D+ A F +++ +G+ A GS+ L G P+ + K +A K N
Sbjct: 115 QDLKKAGDLFEKSANQGNVKAQHDLGSMYLMGQGKPQDIKKAAEWMQKSASKGHPGSLYN 174
Query: 236 L----------MNPVEKAKEQFEVAAQAGCNLGLR 260
L + KAKE F + C++G +
Sbjct: 175 LGIMYKRGEGMPQDIGKAKEMFSKS----CDIGFK 205
>gi|306814141|ref|ZP_07448309.1| hypothetical protein ECNC101_18901 [Escherichia coli NC101]
gi|432513295|ref|ZP_19750530.1| hypothetical protein A17M_01152 [Escherichia coli KTE224]
gi|432698408|ref|ZP_19933573.1| hypothetical protein A31M_01154 [Escherichia coli KTE169]
gi|432745027|ref|ZP_19979725.1| hypothetical protein WGG_01152 [Escherichia coli KTE43]
gi|432971215|ref|ZP_20160090.1| hypothetical protein A15O_01786 [Escherichia coli KTE207]
gi|433082886|ref|ZP_20269350.1| hypothetical protein WIW_02035 [Escherichia coli KTE133]
gi|433144595|ref|ZP_20329741.1| hypothetical protein WKO_02130 [Escherichia coli KTE168]
gi|305852506|gb|EFM52956.1| hypothetical protein ECNC101_18901 [Escherichia coli NC101]
gi|431044334|gb|ELD54614.1| hypothetical protein A17M_01152 [Escherichia coli KTE224]
gi|431245732|gb|ELF40011.1| hypothetical protein A31M_01154 [Escherichia coli KTE169]
gi|431294003|gb|ELF84285.1| hypothetical protein WGG_01152 [Escherichia coli KTE43]
gi|431485471|gb|ELH65133.1| hypothetical protein A15O_01786 [Escherichia coli KTE207]
gi|431602493|gb|ELI71925.1| hypothetical protein WIW_02035 [Escherichia coli KTE133]
gi|431662072|gb|ELJ28881.1| hypothetical protein WKO_02130 [Escherichia coli KTE168]
Length = 378
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +AQ+ LG Q+ +QA + EKA Q A Y LG +Y G V
Sbjct: 216 AAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVT 275
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLE 233
+ A + F +A+EKGH A G + G V + + A ++ ++ A+A E
Sbjct: 276 QSYRQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE 335
Query: 234 SNLMN--------PVEKAKEQFEVAAQAGCNLGLR 260
+MN +++A+ +E + CN GL+
Sbjct: 336 LGVMNELGQGESIDLKQARHYYERS----CNNGLK 366
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ+ LG N Q QQA + EKA +Q A + LG +Y G+ VK
Sbjct: 180 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVK 239
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A F +A+ + A G + G V + + AA+K + + N
Sbjct: 240 QNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAEKGHVDAQYN 299
Query: 236 L 236
L
Sbjct: 300 L 300
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A GD +AQY LG + + + + D QQA + EKA DQ P A LG +Y G
Sbjct: 33 LKSAGENGDVEAQYALGL-MYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANG 91
Query: 172 DCVKKDI-ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL--TKLNAKRVSAAKKA 228
V +D S LW + +A+ + A G + G+ V + K+ ++ +A
Sbjct: 92 LGVNQDYQQSKLW-YEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHAKMWYEKAAAQNDE 150
Query: 229 RANLESNLM----NPVE----KAKEQFEVAA 251
RA + ++ N VE +AK +E AA
Sbjct: 151 RAQVNLAVLYAKGNGVEQDYRQAKSWYEKAA 181
>gi|255065895|ref|ZP_05317750.1| Sel1 repeat family protein [Neisseria sicca ATCC 29256]
gi|349609736|ref|ZP_08889113.1| hypothetical protein HMPREF1028_01088 [Neisseria sp. GT4A_CT1]
gi|255049806|gb|EET45270.1| Sel1 repeat family protein [Neisseria sicca ATCC 29256]
gi|348611304|gb|EGY60965.1| hypothetical protein HMPREF1028_01088 [Neisseria sp. GT4A_CT1]
Length = 286
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ + A GD +Q +LG Q +QA Y+ EKA + A + LG +Y G
Sbjct: 45 LIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAEAQFNLGIIYYEG 104
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A + + +A+E+G+A AA G + G+ VP+
Sbjct: 105 QGTAQDYRQAKFWWEKAAEQGNAEAAFDLGIIHYAGIGVPQ 145
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYEL 128
AK FE A DN+ A++ L ++ Y G + A AA G+ +A ++L
Sbjct: 78 AKYWFEKAAHNDNA--EAQFNLGIIY--YEGQGTAQDYRQAKFWWEKAAEQGNAEAAFDL 133
Query: 129 G----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
G + V DY+Q+ + KA DQ A + LG +Y +G+ V +D A
Sbjct: 134 GIIHYAGIGVPQDYIQAKT----WFHKAADQGEDSAQFYLGLMYYSGEGVGQDYKLAKSW 189
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL-------- 236
F +A++KG+A A G + G V + K AA++ AN ++NL
Sbjct: 190 FEKAAKKGNAKAQYNLGIMYAEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGVLYENGQ 249
Query: 237 --MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKR 271
+AK FE AA G L L+ I ++ +
Sbjct: 250 GVTQNFTQAKSWFEKAAAQGNTLAQHALEYIVQQNQN 286
>gi|410088873|ref|ZP_11285537.1| hypothetical protein C790_3516 [Morganella morganii SC01]
gi|455739010|ref|YP_007505276.1| hypothetical protein MU9_1857 [Morganella morganii subsp. morganii
KT]
gi|409764619|gb|EKN48797.1| hypothetical protein C790_3516 [Morganella morganii SC01]
gi|455420573|gb|AGG30903.1| hypothetical protein MU9_1857 [Morganella morganii subsp. morganii
KT]
Length = 234
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L +AAN GD AQ +G N + A + KA Q + A Y LG +Y G+
Sbjct: 30 LCEAANGGDAGAQVTIGSYYYYGNGAPIDYKTAADWYTKAAVQGNEYAQYSLGEMYFQGE 89
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV-PECL 214
V++D A+ FH++ E+G+AGA G++ G V P+ L
Sbjct: 90 GVQQDYRQAIEWFHKSGEQGNAGAQFRLGAIYEDGDGVNPDFL 132
>gi|336453020|ref|YP_004607486.1| hypothetical protein HBZC1_07880 [Helicobacter bizzozeronii CIII-1]
gi|335333047|emb|CCB79774.1| hypothetical protein HBZC1_07880 [Helicobacter bizzozeronii CIII-1]
Length = 572
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 85 NTHARYWLSKL-HLKYHVPGAC-KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD 142
NT A + L L H+ VP KA A AA +G Y LG + + D VQ D
Sbjct: 447 NTSALHHLGSLYHVGKIVPKDMEKAF--AYFYKAAQLGSIRDCYNLGV-MYSKGDGVQKD 503
Query: 143 -QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
QQA Y EKA D ALY LG +Y G+ V+KD+ A+ F R+ + G+
Sbjct: 504 IQQALSYFEKAADLGSSNALYNLGIIYYQGEGVEKDLEKAISYFQRSCKLGN 555
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 6/164 (3%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AA +GD A Y LG Q+ QA ++ E+A + AL+ LG++Y G V
Sbjct: 405 EAAKLGDDKAYYNLGLMCEYARGVPQNIPQALFFYEEAAKLENTSALHHLGSLYHVGKIV 464
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
KD+ A F++A++ G G + +G V + + + + AA +N
Sbjct: 465 PKDMEKAFAYFYKAAQLGSIRDCYNLGVMYSKGDGVQKDIQQALSYFEKAADLGSSNALY 524
Query: 235 NL------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRL 272
NL VEK E+ Q C LG + Q E K
Sbjct: 525 NLGIIYYQGEGVEKDLEKAISYFQRSCKLGNKKAQETLEALKNF 568
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 18/121 (14%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGAL---------- 161
L +A NMGD DA L RV Q A Y ++A D AL
Sbjct: 276 LYQEAGNMGDADALASLANLYRVGKGVEQDKYTAIAYYKEAADLGDSQALANLNAMSDRG 335
Query: 162 --------YLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
Y LG VY + + KD AL F +A++ GHA A G++ G+ VP+
Sbjct: 336 GSQKAQELYNLGVVYSSDQGIAKDEQKALEYFTQAAKLGHAKAYYNLGTIYSEGLGVPKD 395
Query: 214 L 214
L
Sbjct: 396 L 396
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y LG + + +Q+A Y +A H A Y LGT+Y G V KD+ A CF
Sbjct: 344 YNLGVVYSSDQGIAKDEQKALEYFTQAAKLGHAKAYYNLGTIYSEGLGVPKDLEQAFSCF 403
Query: 186 HRASEKGHAGAAIAYGSL--LLRGV--QVPECL 214
A++ G A G + RGV +P+ L
Sbjct: 404 QEAAKLGDDKAYYNLGLMCEYARGVPQNIPQAL 436
>gi|116750572|ref|YP_847259.1| Sel1 domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116699636|gb|ABK18824.1| Sel1 domain protein repeat-containing protein [Syntrophobacter
fumaroxidans MPOB]
Length = 255
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 99 YHVPGA----CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVD 154
+ VPGA A+ A + A+ GD DAQ+ LG + N Q QA + K+ +
Sbjct: 33 WPVPGAPERDAPAVSAERVRSLADQGDRDAQFTLGSMYLLGNGIQQDQSQAAEWFRKSAE 92
Query: 155 QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
Q + A LG +Y G V D A + +A+E+G A A G+L L G
Sbjct: 93 QGNALAQTSLGAMYYLGQGVPGDHGQAAEWYRKAAEQGEASAQYNLGNLYLLG 145
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD + A++ L ++L + ++ A +A G+ AQ LG +
Sbjct: 55 ADQGDRDAQFTLGSMYLLGNGIQQDQSQAAEWFRKSAEQGNALAQTSLGAMYYLGQGVPG 114
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
QA + KA +Q A Y LG +YL G V+KD A A+ F +A+E+G
Sbjct: 115 DHGQAAEWYRKAAEQGEASAQYNLGNLYLLGHGVEKDEAQAMQWFRKAAEQG 166
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+ DQ A + LG++YL G+ +++D + A F +++E+G+A A + G++ G
Sbjct: 51 VRSLADQGDRDAQFTLGSMYLLGNGIQQDQSQAAEWFRKSAEQGNALAQTSLGAMYYLGQ 110
Query: 209 QVPECLTKLNAKRVSAAKKARANLESNLMN------PVEKAKEQ----FEVAAQAGCNL 257
VP + AA++ A+ + NL N VEK + Q F AA+ G L
Sbjct: 111 GVPGDHGQAAEWYRKAAEQGEASAQYNLGNLYLLGHGVEKDEAQAMQWFRKAAEQGMVL 169
>gi|116749995|ref|YP_846682.1| Sel1 domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116699059|gb|ABK18247.1| Sel1 domain protein repeat-containing protein [Syntrophobacter
fumaroxidans MPOB]
Length = 260
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G +AQY LG + +++ AF + KA +Q H A + +G+ Y G+ V+
Sbjct: 85 SAEQGYAEAQYALGACYELGEGTDKNEMLAFQWYGKAAEQGHAQAQFEVGSRYYAGEGVR 144
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLL 204
KD A AL F RAS KG AA SLL
Sbjct: 145 KDYAEALKWFERASSKGVRRAAHRMASLL 173
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+P AQ+ LG ++ AF + + +Q + A Y LG Y G+ K
Sbjct: 50 AEKGEPSAQFRLGEMYEYGEGVPENAALAFQWYSVSAEQGYAEAQYALGACYELGEGTDK 109
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ A + +A+E+GHA A GS G V
Sbjct: 110 NEMLAFQWYGKAAEQGHAQAQFEVGSRYYAGEGV 143
>gi|303237418|ref|ZP_07323984.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
gi|302482368|gb|EFL45397.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
Length = 429
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD DAQY +G Q+ +A + KA +Q A + LG +Y G
Sbjct: 50 LYKDAAKAGDVDAQYNVGYCYENGEGVEQNYSEAAKWYRKAAEQGLSAAQHGLGYLYAYG 109
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
VK++ A F +A+E+G+ + A G+ G VP+ V AAK R
Sbjct: 110 QGVKENWTEAAKWFSKAAEQGYGLSIFAMGACYEDGNGVPQNF-------VEAAKYYRKA 162
Query: 232 LESNLMNPVE 241
++ N++ E
Sbjct: 163 VDKNVVEAYE 172
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A +G+ DAQ L N Q+ +A ++EKAV Q +P A+ LG YL G V
Sbjct: 341 GAELGNSDAQTNYAKCLLQGNGITQNYTEAIKWLEKAVAQKNPIAINNLGFCYLNGFGVT 400
Query: 176 KDIASALWCFHRASEKGH 193
D+ A F +A++ G+
Sbjct: 401 ADLEKAEQYFQKAADMGY 418
>gi|114321729|ref|YP_743412.1| Sel1 domain-containing protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114228123|gb|ABI57922.1| Sel1 domain protein repeat-containing protein [Alkalilimnicola
ehrlichii MLHE-1]
Length = 359
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GDPDAQ +LG R Q DQ A + +A Q HP +G ++ G V
Sbjct: 212 AAEAGDPDAQVQLGNCYRDGRGVAQDDQAAVDWYWRAARQGHPEGQTNVGVMHDQGRGVF 271
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE------CLTKLNAKRVSAAKKAR 229
KD A A+ + A+E+G A + G V E C L ++ A +
Sbjct: 272 KDPAKAVKWYRLAAEQGFPPAQYNLAIMYSEGHGVEEDKIEAWCWFSLADRQGYAPARDA 331
Query: 230 ANLESNLMNPVEKAK 244
+M+P+ +A+
Sbjct: 332 VTWLDEVMDPISRAR 346
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 59/131 (45%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
A A L AA GDPDAQ LG L Q A + E+A ++ H A + LG
Sbjct: 22 PAEAARLWRPAAEQGDPDAQVGLGLLLAHGEGLEQDLAAARRWWEQAAEKDHADAWFNLG 81
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAA 225
+ G D A A + RA+++GH A +LL +G VPE + A AA
Sbjct: 82 QITEYGLDGTPDPAQAAALYRRAADQGHPQGLHALAALLFQGQGVPEDPAQAVALWRRAA 141
Query: 226 KKARANLESNL 236
+ + E++L
Sbjct: 142 EAGLPDAENSL 152
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 68 LKTAKENFELALEADNSNTHARYWLSKLHL-KYHVPGAC-KAMGAALLVDAANMGDPDAQ 125
L A+ +E A E D HA W + + +Y + G A AAL AA+ G P
Sbjct: 58 LAAARRWWEQAAEKD----HADAWFNLGQITEYGLDGTPDPAQAAALYRRAADQGHPQGL 113
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+ L L + QA +A + P A LG + G V++D ++A+ +
Sbjct: 114 HALAALLFQGQGVPEDPAQAVALWRRAAEAGLPDAENSLGVAHQMGRGVEEDFSAAVRHY 173
Query: 186 HRASEKGH 193
RA+E+GH
Sbjct: 174 RRAAEQGH 181
>gi|160900665|ref|YP_001566247.1| Sel1 domain-containing protein [Delftia acidovorans SPH-1]
gi|160366249|gb|ABX37862.1| Sel1 domain protein repeat-containing protein [Delftia acidovorans
SPH-1]
Length = 416
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG L + QA + +++ +Q Y LG +Y TG V
Sbjct: 197 AAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRSAEQGEAAGQYSLGVMYATGRGVA 256
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D+ AL F A+ +GHA A G L G V + + AA++ A +SN
Sbjct: 257 EDVGQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDRDMAQAAHWLEKAAEQGNAAAQSN 316
Query: 236 L 236
L
Sbjct: 317 L 317
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G+ QY LG + QA + A Q H A + G +Y G V
Sbjct: 233 SAEQGEAAGQYSLGVMYATGRGVAEDVGQALRWFVAAAGQGHADAQFNAGMLYAEGGVVD 292
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D+A A +A+E+G+A A G L G VP K AA++ A +SN
Sbjct: 293 RDMAQAAHWLEKAAEQGNAAAQSNLGVLYANGQGVPASDEKAARWLERAAQQGDALAQSN 352
Query: 236 LMN 238
L +
Sbjct: 353 LAS 355
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+ AQY LG + S + A + EK+ Q + A LG +Y G V +
Sbjct: 126 AEQGEASAQYALGSLYKRGQGVAPSAETAAQWYEKSAQQGYAPAQSELGLMYANGRGVAR 185
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
D A A+ + +A+E+G A A G +L G
Sbjct: 186 DDAQAVQWYRKAAEQGDAVAQNNLGLMLAEG 216
>gi|421881395|ref|ZP_16312730.1| hypothetical protein HBZS_111750 [Helicobacter bizzozeronii CCUG
35545]
gi|375316388|emb|CCF80726.1| hypothetical protein HBZS_111750 [Helicobacter bizzozeronii CCUG
35545]
Length = 128
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 85 NTHARYWLSKLHLKYHVPGAC-KAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQS 141
NT A + L L YHV K M A AA +G Y LG + + D VQ
Sbjct: 3 NTSALHHLGSL---YHVGKIVPKDMEKAFAYFYKAAQLGSIRDCYNLGV-MYSKGDGVQK 58
Query: 142 D-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
D QQA Y EKA D ALY LG +Y G+ V+KD+ A+ F R+ + G+
Sbjct: 59 DIQQALSYFEKAADLGSSNALYNLGIIYYQGEGVEKDLEKAISYFQRSCKLGN 111
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
M + A + LG V + ++AF Y KA Y LG +Y GD V+KDI
Sbjct: 1 MENTSALHHLGSLYHVGKIVPKDMEKAFAYFYKAAQLGSIRDCYNLGVMYSKGDGVQKDI 60
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
AL F +A++ G + A G + +G V + L K
Sbjct: 61 QQALSYFEKAADLGSSNALYNLGIIYYQGEGVEKDLEK 98
>gi|237746461|ref|ZP_04576941.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377812|gb|EEO27903.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 827
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 157 HPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
HP A+Y LGT+ ++G+ K+ A A+ F +++EKGH A A G L LR P
Sbjct: 411 HPAAMYWLGTMLVSGEGTPKNEALAMQWFRQSAEKGHVPAMTALGILNLRKTTAPPDPAA 470
Query: 217 LNA--KRVSAAKKARANLESNLMN------PVEK--AKEQFEVAAQAG 254
++ +A +A E +M P + A+E FE AAQ+G
Sbjct: 471 ARKWLEKAAARNDRQARFELGMMAKNGIGMPADPASAREWFEKAAQSG 518
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 16/179 (8%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA + DP AQ +L +A + EKA Q + A Y L L+ + +K
Sbjct: 622 AARLNDPYAQEQLALLYAHGRGAPADPAKAREWFEKAARQGYAPAQYRLALFLLSANALK 681
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK-----LNAKRVSAAKK--- 227
++ +A +++ G+A A+ Y SLL GV VP+ + + A R A+
Sbjct: 682 QEPDTAATWLRKSAGSGYADASHFYASLLYLGVGVPQDIPEAIHYFTKAARAGHAESAFI 741
Query: 228 -----ARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLTESSRIET 281
AR N + +KA++ F +A +AG R L ++++ S+R+
Sbjct: 742 LGTIYARGN---GVARDPDKARDWFGMAQKAGHPDAARALSKLDDMRTAPPDGSARLPP 797
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A L +A G DA + L + Q +A +Y KA H + ++LGT+Y
Sbjct: 688 ATWLRKSAGSGYADASHFYASLLYLGVGVPQDIPEAIHYFTKAARAGHAESAFILGTIYA 747
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
G+ V +D A F A + GH AA A L
Sbjct: 748 RGNGVARDPDKARDWFGMAQKAGHPDAARALSKL 781
>gi|383311465|ref|YP_005364275.1| Sel1 domain-containing protein [Pasteurella multocida subsp.
multocida str. HN06]
gi|380872737|gb|AFF25104.1| Sel1 domain protein [Pasteurella multocida subsp. multocida str.
HN06]
Length = 172
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A G+ AQ+ +G R+ + D V+ D QQA + +K+ +Q HP A Y LG +Y
Sbjct: 48 LWLSRAEQGEMSAQFNVG-RMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSE 106
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
GD + +D A + +A+ G A A G+L G V
Sbjct: 107 GDGIAQDFKQAYKWYSQAALLGDARALYNLGTLYANGEGV 146
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY LG + Q +QA+ + +A ALY LGT+Y G+ V+
Sbjct: 88 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQAALLGDARALYNLGTLYANGEGVE 147
Query: 176 KDIASALWCFHRASEKG 192
++ A F +A + G
Sbjct: 148 RNWDRAKMYFKQACKAG 164
>gi|195503005|ref|XP_002098471.1| GE23928 [Drosophila yakuba]
gi|194184572|gb|EDW98183.1| GE23928 [Drosophila yakuba]
Length = 822
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 81/197 (41%), Gaps = 21/197 (10%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAA---LLVDAANMGDPDAQYE 127
A E F LA A N+ A +L KL+L+ KA A AA MGDP Q
Sbjct: 359 ALEYFSLAATAGNAVGFA--FLGKLYLE--GSDQIKADNDAAFKYFSKAAEMGDPVGQSG 414
Query: 128 LGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
LG L V D ++ A Y +A DQ LG +Y TGD VK D A
Sbjct: 415 LGLMYLKGLGVPKDSIK----ALSYFTQAADQGWVDGQLQLGNMYFTGDGVKTDYKLAFK 470
Query: 184 CFHRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLM 237
++ A++ GH G AYG +LR K ++R + +
Sbjct: 471 YYNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMHAYSDYKE 530
Query: 238 NPVEKAKEQFEVAAQAG 254
N ++KA Q+ + A+ G
Sbjct: 531 NRIDKAYMQYSLMAEVG 547
>gi|410087186|ref|ZP_11283891.1| hypothetical protein C790_1285 [Morganella morganii SC01]
gi|455740549|ref|YP_007506815.1| hypothetical protein MU9_3398 [Morganella morganii subsp. morganii
KT]
gi|409766415|gb|EKN50509.1| hypothetical protein C790_1285 [Morganella morganii SC01]
gi|455422112|gb|AGG32442.1| hypothetical protein MU9_3398 [Morganella morganii subsp. morganii
KT]
Length = 156
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCV 174
AA +P AQ E G + + N V + Q+A + EKA Q P ALY G +Y G C
Sbjct: 10 AAEQNNPYAQNEPGKLILLSNHSVTALQEARVWFEKAASQNQPDALYQPGVMYYRGKGCE 69
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+ D A A + RA+ + H A + LRG
Sbjct: 70 RGDCAIARSFYERAAAQSHGSAQFYLAMMYLRG 102
>gi|291539088|emb|CBL12199.1| Sel1 repeat [Roseburia intestinalis XB6B4]
Length = 936
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Query: 81 ADNSNTHARYWLSKLHLKYH----------VPGACK-AMGAALLVDAANMGDPDAQYELG 129
+D NTHA Y L++L+++ P K A L ++A +P A Y +G
Sbjct: 665 SDYGNTHASYQLARLYIRQESQKLSGESGTAPDYAKIAKAVKWLEESAAQENPFADYAIG 724
Query: 130 CRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
RL E V D ++A +++++A D + A Y LG +YL D K+I +A+ A
Sbjct: 725 -RLYREGTLVAEDMEKAVFHLKRAADARNSYAQYQLGKIYLEEDT--KNIPAAIQYLTLA 781
Query: 189 SEKGHAGAAIAYGSLLLRGVQVP 211
+++ + AA G L L G ++P
Sbjct: 782 AKQKNQFAAYRLGKLYLAGEELP 804
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 75 FELALEADNSNTHARYWLSKLHLK---YHVPGACKAMGAALLVDAANMGDPDAQYELGCR 131
F L AD N++A+Y L K++L+ ++P A + L AA + A Y LG
Sbjct: 742 FHLKRAADARNSYAQYQLGKIYLEEDTKNIPAAIQ-----YLTLAAKQKNQFAAYRLGKL 796
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
+ ++ + A +Y++ A D + A Y LG VYL G V++D A F +++E+
Sbjct: 797 YLAGEELPKNTELALHYLKMAADTGNQYAQYALGKVYLIGKDVQQDKELAYDYFLKSAEQ 856
Query: 192 GHAGAA 197
G+ AA
Sbjct: 857 GNIYAA 862
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
QY LG ++E QA + KA + H ALY LG +YL G V++D +A
Sbjct: 529 QYGLGTDEKLE--------QAGEWFSKAAAKEHKYALYSLGMLYLQGKGVEQDEETAYSL 580
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKR 221
R+ KG+ AA G L G C T+ N ++
Sbjct: 581 LFRSYSKGNPYAAYELGKLYETG-----CGTEKNQEK 612
>gi|378954637|ref|YP_005212124.1| hypothetical protein SPUL_0894 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438122779|ref|ZP_20872341.1| hypothetical protein SEEP9120_02020 [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|357205248|gb|AET53294.1| hypothetical protein SPUL_0894 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434943040|gb|ELL49225.1| hypothetical protein SEEP9120_02020 [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
Length = 722
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGGKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|183600300|ref|ZP_02961793.1| hypothetical protein PROSTU_03860 [Providencia stuartii ATCC 25827]
gi|386743727|ref|YP_006216906.1| hypothetical protein S70_11840 [Providencia stuartii MRSN 2154]
gi|188020091|gb|EDU58131.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
gi|384480420|gb|AFH94215.1| hypothetical protein S70_11840 [Providencia stuartii MRSN 2154]
Length = 263
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GDP AQY LG R N Q + A + KA DQ + A + LGT+Y+ G V++
Sbjct: 41 AQKGDPTAQYLLGQRYFKGNGVSQDSKVAAEWFIKAGDQGNADAQFQLGTMYVNGFGVRR 100
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
D A+ + +A+++ A + +G+ V + L K
Sbjct: 101 DYDKAMLWYQQAAKQNDTRAETNMAMMYAQGLGVAQDLEK 140
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
QQ I + + P A YLLG Y G+ V +D A F +A ++G+A A G+
Sbjct: 31 QQTIEQITQLAQKGDPTAQYLLGQRYFKGNGVSQDSKVAAEWFIKAGDQGNADAQFQLGT 90
Query: 203 LLLRGVQVPECLTKLNAKRVSAAKKARANLESNL----------MNPVEKAKEQFEVAAQ 252
+ + G V K AAK+ E+N+ +EKA F AAQ
Sbjct: 91 MYVNGFGVRRDYDKAMLWYQQAAKQNDTRAETNMAMMYAQGLGVAQDLEKAAYWFRKAAQ 150
Query: 253 AG 254
G
Sbjct: 151 GG 152
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 66 PLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQ 125
P +T ++ +LA + D + A+Y L + + K + + A + A + G+ DAQ
Sbjct: 29 PSQQTIEQITQLAQKGDPT---AQYLLGQRYFKGNGVSQDSKVAAEWFIKAGDQGNADAQ 85
Query: 126 YELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
++LG V DY +A + ++A Q A + +Y G V +D+ A
Sbjct: 86 FQLGTMYVNGFGVRRDY----DKAMLWYQQAAKQNDTRAETNMAMMYAQGLGVAQDLEKA 141
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ F +A++ G+ A G + G V
Sbjct: 142 AYWFRKAAQGGNVIAQFHIGQMYSIGSGV 170
>gi|189502271|ref|YP_001957988.1| hypothetical protein Aasi_0892 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497712|gb|ACE06259.1| hypothetical protein Aasi_0892 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1877
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 116 AANMGDPDAQYELG----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AAN G +AQY LG L V+ DY Q+A + EKA Q H GA Y LG +Y
Sbjct: 198 AANKGHAEAQYNLGWIYQNSLGVDQDY----QKARGWFEKAAIQRHAGAQYNLGCMYKDK 253
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V +D A A F +A+ +G A A GSL + V + K AA + A
Sbjct: 254 LGVAQDYAKAREWFEKAAVQGVADAQYKLGSLYQNSLGVAQDYKKAREWFEEAAAQRHAR 313
Query: 232 LESNL---------MN-PVEKAKEQFEVAAQAG-----CNLGL 259
++NL MN EKA+E F+ AA G NLG
Sbjct: 314 AQNNLGFLYQHGLGMNQDYEKAREWFKKAADQGHAHAQYNLGF 356
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 110 AALLVDAANMGDPDAQYELGC----RLRVENDYVQS------------------------ 141
AA AAN G +AQYELG L VE DY+ +
Sbjct: 684 AAWYEKAANQGLVEAQYELGTIYANGLGVEQDYMNAITWFKKATQQEHAPSQNKLGWIYY 743
Query: 142 DQ----QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
DQ +A + +KA Q H A Y LG +Y V KD A+ + +A+++GH GA
Sbjct: 744 DQKDYTKAITWFKKAAKQNHVNAQYNLGWIYQYIKDVGKDYEKAIVWYQKAADQGHTGA 802
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 17/186 (9%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL----------------LVDAAN 118
++ +L D AR W K ++ H GA +G AA
Sbjct: 214 YQNSLGVDQDYQKARGWFEKAAIQRHA-GAQYNLGCMYKDKLGVAQDYAKAREWFEKAAV 272
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
G DAQY+LG + Q ++A + E+A Q H A LG +Y G + +D
Sbjct: 273 QGVADAQYKLGSLYQNSLGVAQDYKKAREWFEEAAAQRHARAQNNLGFLYQHGLGMNQDY 332
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN 238
A F +A+++GHA A G L G+ + + TK AA+K A E L +
Sbjct: 333 EKAREWFKKAADQGHAHAQYNLGFLYQHGLGMNQDYTKAKEWYKKAAEKEHAGAERMLKD 392
Query: 239 PVEKAK 244
+E+ K
Sbjct: 393 LIEEEK 398
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 116 AANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD +AQYELG L ++ DY ++ ++EKA +Q H A + LG +Y G
Sbjct: 471 AAEQGDIEAQYELGIIYANGLGIKQDYTRAKG----WLEKAAEQGHRAAQFNLGWMYYHG 526
Query: 172 DCVKKDIASALWCFHRASE 190
VK D C+ E
Sbjct: 527 QGVKWDDKKPKVCYQYKKE 545
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAM------GAALLVDAANMGDP 122
K K ++ EA+ + A+Y KL +KY+ A K + A AA
Sbjct: 534 KKPKVCYQYKKEAEQVDVEAQY---KLGVKYY--NAKKNIDVDYEKAVAWFKKAAKQNHV 588
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
DAQY +G QS ++A + EKA + H A Y LG +Y ++D+ A+
Sbjct: 589 DAQYRIGWMYHHAQGLDQSYKKAIKWYEKAATRGHKEAQYNLGFIYDNKLGGQQDVMKAI 648
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ +ASE+G G + +G V
Sbjct: 649 VWYAKASEQGQTSVQNNLGIMDYKGEGV 676
>gi|421498702|ref|ZP_15945791.1| Sel1 protein repeat-containing protein [Aeromonas media WS]
gi|407182289|gb|EKE56257.1| Sel1 protein repeat-containing protein [Aeromonas media WS]
Length = 349
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQ LG Q DQQA + KAV+Q + LG +Y G V+
Sbjct: 75 AAEQGNADAQSNLGAMYAQGRGVPQDDQQAVAWYRKAVEQGNAITQCNLGAMYYDGKGVE 134
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A A+ F +A+E+G A A + G VP+
Sbjct: 135 QDYAQAMAWFRKAAEQGDADAQYNLALMYYNGEGVPQ 171
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA GD +AQ +LG + Q +QQA + KA +Q + A LG +Y G
Sbjct: 36 LYKAAEQGDANAQCDLGFMFEMGQGVPQDNQQAAIWYRKAAEQGNADAQSNLGAMYAQGR 95
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V +D A+ + +A E+G+A G++ G V + + A AA++ A+
Sbjct: 96 GVPQDDQQAVAWYRKAVEQGNAITQCNLGAMYYDGKGVEQDYAQAMAWFRKAAEQGDADA 155
Query: 233 ESNL 236
+ NL
Sbjct: 156 QYNL 159
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ LG Q DQQA + KA +Q + A LG +Y G V
Sbjct: 255 AAEQGHADAQTSLGSMYAHGLGVPQDDQQAVAWYRKAAEQGNASAQCNLGVMYEKGRGVP 314
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++ A+ + +A+ +GHAGA GSL +G+ V
Sbjct: 315 QNNQQAVAWYSQAARQGHAGAQHQLGSLYAQGLGV 349
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVS 223
LG + G V+ D A A+ + +A+E+GHA A + GS+ G+ VP+ + A
Sbjct: 231 LGEMNEMGQGVRLDYAQAVAWYRKAAEQGHADAQTSLGSMYAHGLGVPQDDQQAVAWYRK 290
Query: 224 AAKKARANLESNLMNPVEKAK 244
AA++ A+ + NL EK +
Sbjct: 291 AAEQGNASAQCNLGVMYEKGR 311
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
E+G +R+ DY Q A + KA +Q H A LG++Y G V +D A+ +
Sbjct: 236 EMGQGVRL--DYAQ----AVAWYRKAAEQGHADAQTSLGSMYAHGLGVPQDDQQAVAWYR 289
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A+E+G+A A G + +G VP+ + A AA++ A + L
Sbjct: 290 KAAEQGNASAQCNLGVMYEKGRGVPQNNQQAVAWYSQAARQGHAGAQHQL 339
>gi|88707128|ref|ZP_01104822.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88698640|gb|EAQ95765.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 218
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD----QQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
A GD DAQY LG L E D + +D +A + KA D H A L+G +Y G
Sbjct: 69 AENGDVDAQYRLGMALLREFD-ISTDPATQSEAIAMLRKAADGDHSQAQSLMGDLYFQGR 127
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
V +D A + +A+ +GHA A G + G P L
Sbjct: 128 GVVQDFVQAFDWYSKAANQGHAEAMYGLGKMSRSGWGRPVSLV 170
>gi|261252821|ref|ZP_05945394.1| hypothetical protein VIA_002845 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417952816|ref|ZP_12595867.1| hypothetical protein VIOR3934_04109 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260936212|gb|EEX92201.1| hypothetical protein VIA_002845 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342818423|gb|EGU53289.1| hypothetical protein VIOR3934_04109 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 343
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLL 164
C A L+ +A D AQ EL R + QS +AFY+ ++A + A L
Sbjct: 15 CIAQPIEELLQSAQNQDVQAQLELANRYSTGDQVEQSQSEAFYWYQQAAKNGNNNAAAAL 74
Query: 165 GTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
G Y TGD K D +A++ A+ G AA + G L Q P L
Sbjct: 75 GHAYFTGDGTKADTENAIFWLSHAASNGSPEAAKSLGKLYESLKQGPNAL 124
>gi|290970862|ref|XP_002668285.1| predicted protein [Naegleria gruberi]
gi|284081597|gb|EFC35541.1| predicted protein [Naegleria gruberi]
Length = 748
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
+G L + AA G AQY +G + DY Q+AF + ++ P +L+
Sbjct: 616 LGLELFLKAAENGHIAAQYNIGMIYLEKQDY----QKAFEWFKQCEVHNDPNSLFQYALF 671
Query: 168 YLTGD-CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
Y G V+KD A F R++E+GHA A L +G+ + + +K
Sbjct: 672 YYNGSHIVEKDYTKAFELFLRSAEQGHAQAQYNLALLYFKGIGIDQDYSK 721
>gi|432984736|ref|ZP_20173470.1| hypothetical protein A175_01190 [Escherichia coli KTE215]
gi|433101548|ref|ZP_20287635.1| hypothetical protein WK5_02101 [Escherichia coli KTE145]
gi|431503266|gb|ELH82002.1| hypothetical protein A175_01190 [Escherichia coli KTE215]
gi|431619500|gb|ELI88421.1| hypothetical protein WK5_02101 [Escherichia coli KTE145]
Length = 149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q+ +QA + EKA Q P A Y LG +Y G V + A F +A+EKGH A
Sbjct: 11 QNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQYN 70
Query: 200 YGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLESNLMNPVEKAK----EQFEVAAQA 253
G + G V + + A ++ ++ A+A E +MN + + + +Q +
Sbjct: 71 LGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESIDLKQARHYYER 130
Query: 254 GCNLGLR 260
CN GL+
Sbjct: 131 SCNNGLK 137
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ P+AQY LG QS +QA + EKA ++ H A Y LG +Y G+ V
Sbjct: 23 AASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVS 82
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSL 203
++ A + +A+ + A A G +
Sbjct: 83 QNYQQAKAWYEKAASQNDAQAQFELGVM 110
>gi|84394204|ref|ZP_00992934.1| hypothetical protein V12B01_19651 [Vibrio splendidus 12B01]
gi|84375186|gb|EAP92103.1| hypothetical protein V12B01_19651 [Vibrio splendidus 12B01]
Length = 942
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A A GD Q+ LG Q D QA + KA +Q H A LG +Y
Sbjct: 30 AAYFQQAEQGDAHGQFNLGVMYEDGKGVSQDDTQAVSWYRKAAEQGHARAQTNLGRMYKK 89
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V +D A+ + +A+E+G+A A G + G V + + + AA++ A
Sbjct: 90 GRGVSQDYEEAVSWYRKAAEQGYARAQTNLGWMYDEGRGVSQDYEESVSWYRKAAEQGYA 149
Query: 231 NLESNL-----------------MNPVEKAKEQFEVAAQAGCNLG 258
++NL ++ +KA EQ E +AQ NLG
Sbjct: 150 RAQTNLGWMYKEGRGISQDDKEAVSWYKKAAEQGEASAQ--NNLG 192
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG Q D++A + +A +Q + A LG +Y G V
Sbjct: 395 AAEQGDASAQNNLGIMYDEGTGVSQGDKEAVSWYRQAAEQGYARAQTNLGWMYADGTGVS 454
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +A+E+G+A A G + + G V +
Sbjct: 455 QDYKEAVSWYQKAAEQGYARAQTKLGWMYVEGTGVSQ 491
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G AQ +LG + VE V Q D++A + KA +Q H A LG +Y G V
Sbjct: 467 AAEQGYARAQTKLGW-MYVEGTGVSQDDKEAVLWFRKAAEQGHALAQNNLGAMYAEGRGV 525
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++ A++ + +A+E+GHA A G++ G V +
Sbjct: 526 SQNYEEAVYWYRKAAERGHALAQNNLGAMYAEGRGVSQ 563
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG Q D++A Y+ EKA +Q H + LG +Y G V
Sbjct: 719 AAEQGVVDAQHNLGMSYEQGAGVSQDDKEAVYWYEKAAEQGHARSQNHLGWMYDEGIGVS 778
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +A+++G A A G + G V +
Sbjct: 779 QDDKEAVSWYGKAAKQGLATAQNNLGVMYAEGRGVSQ 815
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ LG Q D++A + KA +Q + A LG +Y G V
Sbjct: 179 AAEQGEASAQNNLGWMYDEGRGVSQDDKEAVSWYRKAAEQGYARAQTNLGWMYENGRGVS 238
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G+ A G + +G+ V + + AA++ A ++N
Sbjct: 239 QDDKEAVSWYRKAAEQGYVRAQTNLGWMYEKGIGVSLDNKEAVSWYRKAAEQGHARAQNN 298
Query: 236 L 236
L
Sbjct: 299 L 299
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G DAQY LG +Q ++A + KA +Q H A LG++Y+ G +
Sbjct: 575 AIEQGAMDAQYNLGLSYERGVGVIQDYEEAVLWFRKAAEQGHALAQNNLGSMYVEGRGIS 634
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A+ + +A+E+G A A G + +G+ V + + + A ++ A ++N
Sbjct: 635 QNYEEAVSWYRKATEQGLALAQNNLGVMHEKGLGVSQDYKEAVSWYKKAVEQGHALAQNN 694
Query: 236 L 236
L
Sbjct: 695 L 695
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG Q+ ++A + KA++Q A Y LG Y G V
Sbjct: 539 AAERGHALAQNNLGAMYAEGRGVSQNYEEAVSWYRKAIEQGAMDAQYNLGLSYERGVGVI 598
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ F +A+E+GHA A GS+ + G + +
Sbjct: 599 QDYEEAVLWFRKAAEQGHALAQNNLGSMYVEGRGISQ 635
>gi|188581579|ref|YP_001925024.1| Sel1 domain-containing protein repeat-containing protein
[Methylobacterium populi BJ001]
gi|179345077|gb|ACB80489.1| Sel1 domain protein repeat-containing protein [Methylobacterium
populi BJ001]
Length = 382
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
K A E + LA +++N A L + + P KA G A L AA G P A Y L
Sbjct: 157 KRAHEWYRLAAAQNDANAMASLGLMAMDGRGQ-PKDEKA-GRAWLEQAARKGQPSASYNL 214
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
+++ + A A + P A Y LG +YL G V +D A F RA
Sbjct: 215 AL-IQLAGSKPEDLAAAVANFRTAAEAEVPAAQYALGVLYLQGKGVPRDTTQAAQWFRRA 273
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPE 212
++ G GA + + L G VP+
Sbjct: 274 ADNGDLGAEVEFAIRLFNGDGVPK 297
>gi|52841586|ref|YP_095385.1| hypothetical protein lpg1356 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777221|ref|YP_005185658.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|52628697|gb|AAU27438.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364508035|gb|AEW51559.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 376
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD +Y LG + + +D +A FY+ +A + H A L YL G V
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGIGADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
D A + + A+EKG A G LLL G V + + +A +
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQG------ 299
Query: 235 NLMNPVEKAKEQFEVAAQAGCNLGL----RWLQ-----RIEEEEKRL------LTESSRI 279
NP+ +AK + A G N L WL+ + EE K+L LTE ++
Sbjct: 300 ---NPIGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSLEAKLTEPEKL 356
Query: 280 E 280
E
Sbjct: 357 E 357
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+ AA G+P AQ +G + SD +AF + +KA +Q + A LG Y+ G
Sbjct: 112 MKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFNWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 174 VKKDIASALWCFHRASEKG 192
KD+ A + +A+E+G
Sbjct: 172 TPKDVKKAFEWYQKAAEQG 190
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ + AQ LG Q +AF + KA +Q +P A +G +Y TGD V
Sbjct: 78 AADKNNALAQLSLGFMYDTGKGVSQDFTEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVA 137
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A F +A+E+G++ A + G + G P+ + K
Sbjct: 138 ASDDKAFNWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A++ + +A+ +L+ +LK + A A AA G P+AQ +LG L +
Sbjct: 224 ANHGHVNAQTYLAYYYLKGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDK 283
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
QQA Y+ K+ Q +P LG +YL G V K + A A+E
Sbjct: 284 DYQQAAYWFGKSAHQGNPIGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAE 333
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA G+ +A Y LG + + ++A + +KA D+ + A LG +Y TG
Sbjct: 39 LMQAAKEGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGK 98
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK-LNAKRVSAAK---KA 228
V +D A + +A+E+G+ A G + G V K N + +A + KA
Sbjct: 99 GVSQDFTEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFNWFKKAAEQGYSKA 158
Query: 229 RANLESNLM------NPVEKAKEQFEVAAQAGCNLG 258
+ NL M V+KA E ++ AA+ G G
Sbjct: 159 QVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG 194
>gi|323450491|gb|EGB06372.1| hypothetical protein AURANDRAFT_29293 [Aureococcus anophagefferens]
Length = 483
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD DAQ C L D + ++AF Y A DQ H + LG Y+ G+ +
Sbjct: 214 AADRGDADAQ----CNLAALLDSQKKFEEAFRYYALAADQGHTRGEHNLGCCYMDGEGTE 269
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
D+ A + F RA+ KGH A A L R P C A + R ++E+
Sbjct: 270 VDLGKARYWFERAAAKGHEKAIQALARLDAR--TCPLCRIPCPTTHAEALAQVRRHVENE 327
Query: 236 LMNPV 240
+ +
Sbjct: 328 VPEAI 332
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQ LG LR E + ++A Y A DQ + A + LG Y TG +
Sbjct: 396 AADRGHATAQDNLGNVLRSEEKF----EEAVRYFVLAADQGYTNAEHNLGYCYHTGKGTE 451
Query: 176 KDIASALWCFHRASEKGH 193
D+ A + + RA+ KG+
Sbjct: 452 VDLGKARYWYERAAAKGN 469
>gi|437357831|ref|ZP_20748036.1| hypothetical protein SEEE2558_04935 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435211306|gb|ELN94448.1| hypothetical protein SEEE2558_04935 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
Length = 713
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 88/219 (40%), Gaps = 35/219 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAK 226
GD V +D L +A+E G + A + G L L G +P+ L + K+ +
Sbjct: 611 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 670
Query: 227 KARANLESNLM--------NPVEKAKEQFEVAAQAGCNL 257
A+A+ LM + KAK A +A NL
Sbjct: 671 NAQAHYNLGLMYRNGDGVEKDLNKAKLHLTAAVKAASNL 709
>gi|325267696|ref|ZP_08134347.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980820|gb|EGC16481.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 344
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G DAQ+ LG Q +A +I +A +Q A LG +Y TG V +
Sbjct: 36 AQQGVADAQFNLGLMYYNGQGVRQDYAEALRWIRQAAEQGVAAAQNNLGMLYYTGSGVHQ 95
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A AL +A+E+GHA A I G++ G+ V + + AA++ A ++ NL
Sbjct: 96 DYAEALRWIRQAAEQGHAEAQINLGAMYENGLGVRQDDAEAVRWYRKAAEQGNAAIQYNL 155
Query: 237 MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
E + + A+A +RW ++ E+
Sbjct: 156 GLLYENGRNVRQDYAEA-----VRWYRKAAEQ 182
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ LG Q D +A + KA +Q + Y LG +Y G V+
Sbjct: 107 AAEQGHAEAQINLGAMYENGLGVRQDDAEAVRWYRKAAEQGNAAIQYNLGLLYENGRNVR 166
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A+E+G A A G + G V + + AA + A + N
Sbjct: 167 QDYAEAVRWYRKAAEQGDAEAQYHLGEMYHNGQGVRQDYAEAVKWYRQAAAQGFAEAQFN 226
Query: 236 L 236
L
Sbjct: 227 L 227
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ+ LG Q +A + +A DQ + A Y LG +Y G V
Sbjct: 215 AAAQGFAEAQFNLGAMYDNGQGVHQDYAEAVKWYRQAADQGNAKAQYNLGLLYDNGRGVH 274
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
+D A A+ + +A+++G+A A G + G V + L
Sbjct: 275 QDYAEAVKWYRQAADQGNADAQYHLGGMYHNGQGVHQDL 313
>gi|410688509|ref|YP_006961773.1| truncated hypothetical protein, Sel1 domain protein [Psychrobacter
sp. DAB_AL60]
gi|380861025|gb|AFF18227.1| truncated hypothetical protein, Sel1 domain protein [Psychrobacter
sp. DAB_AL60]
Length = 265
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +AQY LG + D +AF ++EKA +Q H A + +G + G +
Sbjct: 41 AAEQGDVEAQYSLGKSYYKDIPSYYDDIEAFRWLEKAANQDHVDAQFQVGIMCFRGTGTR 100
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D A A+ + +A+ +GHA A G+ + + K
Sbjct: 101 QDEARAVNWYKKAANQGHANAQYFLADRFYNGIALEQSYIK 141
>gi|400756662|ref|NP_953493.2| hypothetical protein GSU2447 [Geobacter sulfurreducens PCA]
gi|399107973|gb|AAR35820.2| TPR-related repeat protein [Geobacter sulfurreducens PCA]
Length = 252
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%)
Query: 103 GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALY 162
GA A G A AA GD A + L + + +A Y++ A ++ H A Y
Sbjct: 28 GAKAANGYAATQAAARRGDAKAAFRLALMHLDGSGAPRKPTEAARYMKMAAERGHVRAQY 87
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
LGT Y G VK+D ++A +A+ G A A AYG +LL G VP
Sbjct: 88 YLGTFYHEGTGVKRDTSAAARWIGKAAAGGDAEAQYAYGMVLLSGDGVP 136
>gi|345863898|ref|ZP_08816105.1| Sel1 domain protein repeat-containing protein [endosymbiont of
Tevnia jerichonana (vent Tica)]
gi|345125008|gb|EGW54881.1| Sel1 domain protein repeat-containing protein [endosymbiont of
Tevnia jerichonana (vent Tica)]
Length = 197
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
AN GD +A Y LG N ++A + E A Q H A + LG Y TG+ +KK
Sbjct: 24 ANAGDAEAAYNLGWLYANGNGLRVDVEKAIRWWEAAAMQGHLEAQFTLGLTYTTGEGIKK 83
Query: 177 DIASALWCFHRASEKGHAGAA------IAYGSLL----LRGV-QVPECLTKLNAKRVSAA 225
D +AL F +A+ G A + GS L L G+ Q+P +L K A
Sbjct: 84 DTEAALRWFLKAARGGQTDAQEIIREFVQVGSSLVDEHLNGILQLPWIGDRLRVKVKRAN 143
Query: 226 KKARANLESNLMNPVEKAKEQFEVA 250
+A + ++ V + E E+
Sbjct: 144 LRAGPGTGNEIVETVTEGSELVEIG 168
>gi|237746262|ref|ZP_04576742.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377613|gb|EEO27704.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 377
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 57 CELNDRRLIPLLKTAKENFELAL-----EADNSNTHARYWLSKLHLKYHVPGACKAMGAA 111
+ N R+ K+N E A+ AD + A Y L+ ++L+
Sbjct: 58 AQFNLGRMYSKGHGIKQNLEQAMYWYKKSADQGHLKATYNLAYMYLQGKGVKENPEKAYK 117
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L +++A G P AQ+ L + +Q+AF + KA Q A + + Y G
Sbjct: 118 LYLESAEKGLPAAQFNLALMYFKGKGVKKDNQKAFEWFYKAALQGDKEAQFNVALSYTEG 177
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+ +K+ A AL+ + +A+E+G+A A A G + +G VP
Sbjct: 178 NGIKQGYAKALYWYKKAAEQGYAKAMFALGLVYRQGEGVP 217
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AA GD +AQ+ + N Q +A Y+ +KA +Q + A++ LG VY G+
Sbjct: 155 FYKAALQGDKEAQFNVALSYTEGNGIKQGYAKALYWYKKAAEQGYAKAMFALGLVYRQGE 214
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLR----GVQVPECLTKLNAKRVSAAKKA 228
V + A+ + +A+ +G+A A GSL ++ + K + + +
Sbjct: 215 GVPANRDEAIRWYKKAAAQGYAPAMANLGSLYYPEDAGDLESWDEAYKWYSMAIDHGDRK 274
Query: 229 RANLESNLMN-------PVEKAKEQ--FEVAAQAGCNLGLRWLQRIEE 267
A L L++ PV+ AK F +AA+ G G WL +EE
Sbjct: 275 NAPLGLGLIHLFGSGRYPVDNAKAYSLFTLAAENGRADGWYWLGVMEE 322
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ A GD +AQ+ LG + Q+ +QA Y+ +K+ DQ H A Y L +YL G
Sbjct: 46 LIKKGAVSGDAEAQFNLGRMYSKGHGIKQNLEQAMYWYKKSADQGHLKATYNLAYMYLQG 105
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
VK++ A + ++EKG A + +G V
Sbjct: 106 KGVKENPEKAYKLYLESAEKGLPAAQFNLALMYFKGKGV 144
>gi|419764628|ref|ZP_14290868.1| hypothetical protein UUU_35490 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397743211|gb|EJK90429.1| hypothetical protein UUU_35490 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 440
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
++ A GD AQ +LG L E V D ++A + E+A Q + A Y LG +Y G
Sbjct: 50 MLSQAKSGDACAQTQLGI-LYAEGSGVTRDYKKARSWFEQAGKQNYADAEYNLGVMYGNG 108
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
D V +D AL F +A+E GH GA G + +G+
Sbjct: 109 DGVARDNKKALTWFEKAAEHGHIGARYNLGMIYSQGI 145
>gi|397676978|ref|YP_006518516.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397667|gb|AFN56994.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 374
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
V A++ + +E G R ++ QS QA Y +KA D H A + LG +Y G
Sbjct: 33 VKTADVKKANDNFESGLRYYHGHNVAQSYSQAREYFQKAADLGHAEAQFYLGALYERGKG 92
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE----CLTKLNAKRVSAAKKAR 229
V ++ +A + +A+++G A GS+ GV VP+ LT L K A+
Sbjct: 93 VARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRAAGQGDKVAQ 152
Query: 230 ANLESNLMNPVEKAKE 245
NL + A+E
Sbjct: 153 TNLGDMYYQGLGTAQE 168
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G A+Y LG + Q A + +KA DQ P A Y + +Y G V
Sbjct: 179 AAAQGYALAEYNLGVMYSQGHGVTQDMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVV 238
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLL 204
+D AL + +A+++G A + SLL
Sbjct: 239 QDQKVALAWYQKAADQGFVKAQLNLASLL 267
>gi|344924467|ref|ZP_08777928.1| hypothetical protein COdytL_07466 [Candidatus Odyssella
thessalonicensis L13]
Length = 597
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA P+AQY+LG + +Q + +A +I +A + +P ALY LG +Y TG V+
Sbjct: 146 AAKQNCPEAQYKLGLLYAQGHGVIQDEVKALKWISRAAELNYPEALYCLGNLYDTGRIVE 205
Query: 176 KDIASALWCFHRASEKG 192
KD A+ F +A+ +G
Sbjct: 206 KDDELAIRYFRKAAVQG 222
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
Q+ Y+E A + A ++LG +Y+TG V KD+A A+ +G+A A + L
Sbjct: 246 QSLSYLELAAAAFYAPAEHILGHIYITGTKVAKDVAKGSQYILGAANQGYANAQVDLSYL 305
Query: 204 LLRGVQVP----ECLTKLNAKRVSAAKKARANLES 234
L G+++P + L L + K+ARA ++S
Sbjct: 306 LFMGIELPKDEIKALEWLAMAAIQGHKEARALIKS 340
>gi|299771444|ref|YP_003733470.1| hypothetical protein AOLE_16050 [Acinetobacter oleivorans DR1]
gi|298701532|gb|ADI92097.1| hypothetical protein AOLE_16050 [Acinetobacter oleivorans DR1]
Length = 259
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDY-VQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA P+AQY LG L +N Y V D+ +A + + + DQ + A Y L YL+G+
Sbjct: 102 AAKNNFPEAQYNLG--LMYDNGYYVNKDRSKALEFYKLSSDQGYAKAQYNLANAYLSGNG 159
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTKLNAKRVSAAK 226
+ KDI AL + +A+++ + A ++ G V E TK+ K V A+
Sbjct: 160 INKDINLALELYKKAADQNLSEAQYNLANIYSDGSLVKQDNEKALELYTKVAEKGVPEAQ 219
Query: 227 KARANLESNLMNPVEKAKEQFEVAAQAG 254
A + +N+ + EKAK F+ +A G
Sbjct: 220 NNLAYMYANVYSDYEKAKFWFQKSADNG 247
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ +L +++++A+Y+ EKA P A Y LG +Y G V
Sbjct: 66 AAEKGLPIAQNDLAGMYSKGIGTPKNEEKAYYWYEKAAKNNFPEAQYNLGLMYDNGYYVN 125
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
KD + AL + +S++G+A A + L G
Sbjct: 126 KDRSKALEFYKLSSDQGYAKAQYNLANAYLSG 157
>gi|406915363|gb|EKD54450.1| hypothetical protein ACD_60C00079G0003 [uncultured bacterium]
Length = 467
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A N+N A+Y L +L + G + + AL AA G P+AQY LG
Sbjct: 135 AKNNNPLAQYMLG--YLAANGFGMTQNLNTALDWYSKAAAAGVPEAQYNLGLMYYTGQGV 192
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ D +AF + A +Q P A ++LG +Y G V D A + +++A++ G A
Sbjct: 193 SKEDGKAFSWFNLAAEQGLPKAQFMLGVMYSLGRAVPTDKTQAFYWYNKAAQAGLPEAQY 252
Query: 199 AYGSLLLRG 207
G L G
Sbjct: 253 NLGILYYNG 261
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ+ LG + QAFY+ KA P A Y LG +Y G
Sbjct: 206 AAEQGLPKAQFMLGVMYSLGRAVPTDKTQAFYWYNKAAQAGLPEAQYNLGILYYNGSGTT 265
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
++ SA+ +A+++ A A +G L G+ V + + +
Sbjct: 266 VNLNSAVSWIKKAADQDDARAQYFWGYLTYNGIGVAKNIQQ 306
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
AD + A+Y+ +L Y+ G K + A+ AA G +AQ+ LG
Sbjct: 279 ADQDDARAQYFWG--YLTYNGIGVAKNIQQAIDWYEKAAGQGFSEAQFALGFLYHNGLGV 336
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ D+QAF + A Q A Y++G Y G V D +A + + A+E+G A +
Sbjct: 337 AKDDRQAFSWYMAAAKQGLANAQYMVGLFYQQGMGVISDPKAAAYWYTEAAEQGMDNAQL 396
Query: 199 AYGSLLLRG 207
G + +G
Sbjct: 397 LLGVMYSQG 405
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 46/110 (41%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
+M L AA +P AQY LG Q+ A + KA P A Y LG
Sbjct: 125 SMAVTLYNQAAKNNNPLAQYMLGYLAANGFGMTQNLNTALDWYSKAAAAGVPEAQYNLGL 184
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+Y TG V K+ A F+ A+E+G A G + G VP T+
Sbjct: 185 MYYTGQGVSKEDGKAFSWFNLAAEQGLPKAQFMLGVMYSLGRAVPTDKTQ 234
>gi|335041823|ref|ZP_08534850.1| sel1 domain protein repeat-containing protein [Methylophaga
aminisulfidivorans MP]
gi|333788437|gb|EGL54319.1| sel1 domain protein repeat-containing protein [Methylophaga
aminisulfidivorans MP]
Length = 356
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 92 LSKLHLKYHVPGACKAMGAALLVD----------AANMGDPDAQYELGCRLRVENDYVQS 141
+S + + H + M AA D AA G+ +AQY LG L + Q
Sbjct: 15 ISNIFVAVHADSFSEGMDAAQKGDYQAAQQNWLAAAKQGNIEAQYNLGALL-LSGKLGQP 73
Query: 142 D-QQAFYYIEKAVDQLHPGALYLLGTVYLTGD--CVKKDIASALWCFHRASEKGHAGAAI 198
D A +++ A + H A Y LG +Y TG+ VK+D A F +++E+G A A
Sbjct: 74 DYDSAMSWLDIAAQKGHDEAAYALGMLYYTGNEPDVKRDQKKAFELFKKSAERGSAVAQF 133
Query: 199 AYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLG 258
G++L+ G V + L KA A+ EKA EQ +QA NLG
Sbjct: 134 NVGAMLMNGQGVEKDL------------KAAADW-------FEKAGEQGH--SQAQFNLG 172
Query: 259 LRWL--QRIEEEEKRLLTESSR 278
L +L ++++ KR + R
Sbjct: 173 LLYLSGSGVKQDTKRAYSWFKR 194
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L +A G AQ+ +G L + V+ D + A + EKA +Q H A + LG +YL+
Sbjct: 119 LFKKSAERGSAVAQFNVGAML-MNGQGVEKDLKAAADWFEKAGEQGHSQAQFNLGLLYLS 177
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
G VK+D A F R++E G+ A +L G
Sbjct: 178 GSGVKQDTKRAYSWFKRSAESGYPNAQYRVAKMLFDG 214
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 81 ADNSNTHARYWLSKLHL--KYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
A N A+Y L L L K P AM + L AA G +A Y LG N+
Sbjct: 50 AKQGNIEAQYNLGALLLSGKLGQPDYDSAM--SWLDIAAQKGHDEAAYALGMLYYTGNEP 107
Query: 139 -VQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
V+ DQ+ AF +K+ ++ A + +G + + G V+KD+ +A F +A E+GH+ A
Sbjct: 108 DVKRDQKKAFELFKKSAERGSAVAQFNVGAMLMNGQGVEKDLKAAADWFEKAGEQGHSQA 167
Query: 197 AIAYGSLLLRGVQVPE 212
G L L G V +
Sbjct: 168 QFNLGLLYLSGSGVKQ 183
>gi|404493110|ref|YP_006717216.1| SEL1 repeat-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77545174|gb|ABA88736.1| SEL1 repeat-containing protein [Pelobacter carbinolicus DSM 2380]
Length = 303
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G QY LG +Q ++A ++ A +Q H G ++LGT+Y G V
Sbjct: 155 AAEQGHASGQYLLGAMYCNGKGVLQDYKEAAKWLRLAAEQGHAGGQHILGTMYCNGKGVP 214
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAA----KKARAN 231
+D A F A+E+G A A + G L ++G+ V + A V +A +KA N
Sbjct: 215 QDYKEAAKWFRLAAEQGDAKAQLNLGFLYIQGLGVTQSNIDAYAWWVVSAANNNQKAHEN 274
Query: 232 LES--NLMNPVEKAKEQ 246
+++ ++P E K Q
Sbjct: 275 MKAAQGQLSPSEIEKGQ 291
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G QY LG +Q ++A ++ A +Q H YLLG +Y G V
Sbjct: 119 AAEQGHASGQYLLGAMCCNGKGVLQDYKEAAKWLRLAAEQGHASGQYLLGAMYCNGKGVL 178
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A A+E+GHAG G++ G VP+
Sbjct: 179 QDYKEAAKWLRLAAEQGHAGGQHILGTMYCNGKGVPQ 215
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 41/95 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG R + Q +A ++ A +Q H YLLG + G V
Sbjct: 83 AAEKGYVKAQYNLGVRYKEGQGVPQDYNEAVKWLRLAAEQGHASGQYLLGAMCCNGKGVL 142
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A A+E+GHA G++ G V
Sbjct: 143 QDYKEAAKWLRLAAEQGHASGQYLLGAMYCNGKGV 177
>gi|311977379|ref|YP_003986498.1| putative sel1-like repeat-containing protein [Acanthamoeba
polyphaga mimivirus]
gi|81999829|sp|Q5UP97.1|YL021_MIMIV RecName: Full=Putative sel1-like repeat-containing protein L21
gi|55416646|gb|AAV50296.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|308204256|gb|ADO18057.1| putative sel1-like repeat-containing protein [Acanthamoeba
polyphaga mimivirus]
gi|339061036|gb|AEJ34340.1| hypothetical protein MIMI_L21 [Acanthamoeba polyphaga mimivirus]
gi|351737148|gb|AEQ60183.1| hypothetical protein [Acanthamoeba castellanii mamavirus]
gi|398257628|gb|EJN41233.1| hypothetical protein lvs_L4 [Acanthamoeba polyphaga lentillevirus]
Length = 533
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 88 ARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAF 146
+ + L++ +LK +P +A+ LL AAN G +QY LG + E YV +D QA+
Sbjct: 175 SNFMLAETYLKLSIPNFNEAIKNYLL--AANQGCNISQYRLG-MIYFEGKYVNTDMNQAY 231
Query: 147 YYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ + + Q + + Y LG VY + D K + A+ CF +++ GH A
Sbjct: 232 KWFKLSAKQGNYFSQYGLGRVYYSMDSTKYNCQKAINCFIKSANCGHIYA 281
>gi|417851703|ref|ZP_12497396.1| hypothetical protein GEW_09764 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338218752|gb|EGP04498.1| hypothetical protein GEW_09764 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 172
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A G+ AQ+ +G R+ + D V+ D QQA + +K+ +Q HP A Y LG +Y
Sbjct: 48 LWLSRAEQGEMTAQFNVG-RMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSE 106
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
GD + +D A + +A+ G A A G+L G
Sbjct: 107 GDGIAQDFKQAYKWYSQAALLGDARALYNLGTLYANG 143
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A PDAQY LG + Q +QA+ + +A ALY LGT+Y G+ ++
Sbjct: 88 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQAALLGDARALYNLGTLYANGEGIE 147
Query: 176 KDIASALWCFHRASEKG 192
+D A F +A + G
Sbjct: 148 RDWDRAKMYFKQACKAG 164
>gi|344924624|ref|ZP_08778085.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 413
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A+ G AQY L C R+ + +QA + A Q + A Y +G Y TG C+K
Sbjct: 13 ASVQGHKFAQYNLACNYRMGIGVEANQEQAVRWYHFAAIQGYAPAQYEIGCAYQTGLCLK 72
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
KD A F +A+E+ HAGA G L G
Sbjct: 73 KDNKKAREWFQQAAEQNHAGALYKLGCLYENG 104
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQYE+GC + + +++A + ++A +Q H GALY LG +Y GD V+
Sbjct: 49 AAIQGYAPAQYEIGCAYQTGLCLKKDNKKAREWFQQAAEQNHAGALYKLGCLYENGDGVQ 108
Query: 176 KDIASALWCFHRASEKGHAGA 196
D A+ F RA+ G
Sbjct: 109 ADSVQAISYFLRAARLQQGGV 129
>gi|238911605|ref|ZP_04655442.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 331
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVEN-DYVQSDQQAFYYIEKAVDQLHPGALYL 163
C + A L + A G+ +AQY LG E D + D+ +FY++++A +Q H GA Y
Sbjct: 10 CDNVSLAQLTELAQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAEQGHCGAQYW 69
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGH 193
LG Y KD A A + +A+++GH
Sbjct: 70 LGLRYSDTPTSMKDNAKASYWLEKAAKQGH 99
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
+Q++LGC Q QQA ++ ++A Q A +G +Y G V++D AL
Sbjct: 210 SQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAYVNIGWMYKQGHGVERDDEEALS 269
Query: 184 CFHRASEKGHAGAAIAYGSLLLRG 207
FHRA+E G+ A G + G
Sbjct: 270 WFHRAAEAGNVTAWYNLGFMYRDG 293
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACK-AMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A + N+ A+Y L +L+ + G+ + + L AA G AQY LG R +
Sbjct: 22 AQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAEQGHCGAQYWLGLRYSDTPTSM 81
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+ + +A Y++EKA Q H A LG V + D A A++ + +E+GH+ A
Sbjct: 82 KDNAKASYWLEKAAKQGHKLAPNDLGWVLEGETGSEPDYAQAVFWYRVGTERGHSYAQNN 141
Query: 200 YGSLLLRGVQV 210
G + G V
Sbjct: 142 LGKMYEGGDGV 152
>gi|222086265|ref|YP_002544797.1| hypothetical protein Arad_2749 [Agrobacterium radiobacter K84]
gi|221723713|gb|ACM26869.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 393
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ A+++LG + QA + KA DQ + A Y LG +Y G+ V
Sbjct: 80 AAEQGNAKAEFDLGAMYDKGEGIAKDHAQAILWYRKAADQGYADAQYNLGVIYDEGEGVP 139
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A + +A+E+G+A A G + G V + ++ A AA + + + N
Sbjct: 140 KDRTLAFVWYSKAAEQGNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYN 199
Query: 236 L 236
L
Sbjct: 200 L 200
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
AD N A+Y L+ ++ G K G AL AA+ G +AQY L R
Sbjct: 189 ADQGNVDAQYNLAIMYDS--GEGITKDSGQALSWYRKAADQGKIEAQYNLAVMYRDGAGV 246
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ +A + KA DQ A Y LGT+Y GD + +D A+ F +A+++G A
Sbjct: 247 PKDGARAVTWFRKAADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEY 306
Query: 199 AYGSLLLRGVQV----PECL 214
G + G V PE +
Sbjct: 307 NLGVMYRDGEGVAKNGPEAV 326
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ DAQY L + QA + KA DQ A Y L +Y G V
Sbjct: 188 AADQGNVDAQYNLAIMYDSGEGITKDSGQALSWYRKAADQGKIEAQYNLAVMYRDGAGVP 247
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A A+ F +A+++G A A G++ G + E + A AA + E N
Sbjct: 248 KDGARAVTWFRKAADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEYN 307
Query: 236 L 236
L
Sbjct: 308 L 308
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AN GD AQ +LG ++ D ++ D +QA + KA +Q + A + LG +Y G+ +
Sbjct: 45 ANKGDAAAQLKLGEMYKL-GDGIEKDLKQALKWYRKAAEQGNAKAEFDLGAMYDKGEGIA 103
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A A+ + +A+++G+A A G + G VP+ T AA++ A + N
Sbjct: 104 KDHAQAILWYRKAADQGYADAQYNLGVIYDEGEGVPKDRTLAFVWYSKAAEQGNAAAQFN 163
Query: 236 L 236
+
Sbjct: 164 V 164
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD DAQY LG + + D +A + KA DQ A Y LG +Y G+ V
Sbjct: 260 AADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVA 319
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
K+ A+ F +A+ + +A AA+ G + G VP
Sbjct: 320 KNGPEAVGWFEKAAAENYADAALNLGVMYRDGDGVP 355
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ+ +G + Q QA + KA DQ + A Y L +Y +G+ +
Sbjct: 152 AAEQGNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMYDSGEGIT 211
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD AL + +A+++G A + G VP+ + AA + A+ + N
Sbjct: 212 KDSGQALSWYRKAADQGKIEAQYNLAVMYRDGAGVPKDGARAVTWFRKAADQGDADAQYN 271
Query: 236 L 236
L
Sbjct: 272 L 272
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD + A+Y L ++ A AA+ GD +A+Y LG R +
Sbjct: 261 ADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVAK 320
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
+ +A + EKA + + A LG +Y GD V D A +L F RA
Sbjct: 321 NGPEAVGWFEKAAAENYADAALNLGVMYRDGDGVPADRAKSLEWFSRA 368
>gi|312882386|ref|ZP_07742127.1| Sel1 domain-containing protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369786|gb|EFP97297.1| Sel1 domain-containing protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 342
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ DAQ+ LG + V+ +++++ + + KA +Q H + LG +Y G
Sbjct: 70 AAEQGNADAQFHLGFMIAKGRGVDKNFIEAAK----WYRKAAEQGHVKSQNNLGIMYEEG 125
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+ V +D +++ + +A+E+G+A + G + L G VP+ T+ AA++ A+
Sbjct: 126 EGVAQDYTQSVYWYRKAAEQGYAKSQDKLGFMYLFGKGVPQFDTQAFYWFRKAAEQGYAS 185
Query: 232 LESNL 236
++NL
Sbjct: 186 GQNNL 190
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 9/159 (5%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+ +D A G+P Q +LG + VQ +QA Y+ KA +Q + A + LG + G
Sbjct: 30 VYLDQARQGEPIDQLKLGVMYERGDGVVQDYKQAIYWYRKAAEQGNADAQFHLGFMIAKG 89
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V K+ A + +A+E+GH + G + G V + T+ AA++ A
Sbjct: 90 RGVDKNFIEAAKWYRKAAEQGHVKSQNNLGIMYEEGEGVAQDYTQSVYWYRKAAEQGYAK 149
Query: 232 LESNL--MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
+ L M K QF+ A W ++ E+
Sbjct: 150 SQDKLGFMYLFGKGVPQFDTQA-------FYWFRKAAEQ 181
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +Q +LG Q D QAFY+ KA +Q + LG +Y G V
Sbjct: 142 AAEQGYAKSQDKLGFMYLFGKGVPQFDTQAFYWFRKAAEQGYASGQNNLGYMYALGKGVS 201
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
K+ A + + +++E G G + G+ VP+ TK A++ + + N
Sbjct: 202 KNDTEAAYWYRKSAEGGDVVGQSNIGHMYYAGLGVPQDDTKAAYWFKKGAEQGGVSAQGN 261
Query: 236 L 236
L
Sbjct: 262 L 262
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A GD Q +G Q D +A Y+ +K +Q A LG +Y G V
Sbjct: 214 SAEGGDVVGQSNIGHMYYAGLGVPQDDTKAAYWFKKGAEQGGVSAQGNLGVMYYQGRSVP 273
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++ A AL+ + +A+E+G A + G L G VP+
Sbjct: 274 QNYAKALYWYRKAAERGDASSQNNIGVLYEEGKGVPQ 310
>gi|291525797|emb|CBK91384.1| Sel1 repeat [Eubacterium rectale DSM 17629]
Length = 936
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL-----------LVDAANMGDPDAQYELG 129
+D NTHA Y L++L+++ G L L ++A +P A Y LG
Sbjct: 665 SDYGNTHASYQLARLYIRQESQKLSGESGTELDVEKIAKAVKWLEESAAQENPFADYALG 724
Query: 130 CRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
RL E V +D ++A +++++A D + A Y LG +YL D K+I +A+ A
Sbjct: 725 -RLYREGILVAADMEKAVFHLKRAADAGNSYAQYQLGKIYLEEDT--KNIPAAIQYLTLA 781
Query: 189 SEKGHAGAAIAYGSLLLRGVQVP 211
+++ + AA G + L G ++P
Sbjct: 782 AKQKNEFAAYRLGKIYLAGEELP 804
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 75 FELALEADNSNTHARYWLSKLHLK---YHVPGACKAMGAALLVDAANMGDPDAQYELGCR 131
F L AD N++A+Y L K++L+ ++P A + L AA + A Y LG
Sbjct: 742 FHLKRAADAGNSYAQYQLGKIYLEEDTKNIPAAIQ-----YLTLAAKQKNEFAAYRLGKI 796
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
+ ++ + A +Y++ A D + A Y LG VYL G ++D A F +++E+
Sbjct: 797 YLAGEELPKNTELALHYLKMAADTGNQYAQYALGKVYLIGKDARQDKERAYDYFLKSAEQ 856
Query: 192 GHAGAA 197
G+ AA
Sbjct: 857 GNIYAA 862
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A N A Y L +L+ + + A L AA+ G+ AQY+LG ++ +E D +
Sbjct: 712 AAQENPFADYALGRLYREGILVAADMEKAVFHLKRAADAGNSYAQYQLG-KIYLEED-TK 769
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+ A Y+ A Q + A Y LG +YL G+ + K+ AL A++ G+ A A
Sbjct: 770 NIPAAIQYLTLAAKQKNEFAAYRLGKIYLAGEELPKNTELALHYLKMAADTGNQYAQYAL 829
Query: 201 GSLLLRG 207
G + L G
Sbjct: 830 GKVYLIG 836
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
QY LG +E QA + KA + H ALY LG +YL G V++D +A
Sbjct: 529 QYGLGTEENLE--------QAAEWFFKAAAKEHKYALYSLGMLYLQGKGVEQDEETAYSL 580
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKR 221
R+ KG+ AA G L G C T+ N ++
Sbjct: 581 LFRSYSKGNPYAAYELGKLYAAG-----CGTEKNQEK 612
>gi|414176338|ref|ZP_11430567.1| hypothetical protein HMPREF9695_04213 [Afipia broomeae ATCC 49717]
gi|410886491|gb|EKS34303.1| hypothetical protein HMPREF9695_04213 [Afipia broomeae ATCC 49717]
Length = 1098
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLL 164
+ +G+A L +AAN G+P A +E+G R E V SD A + E+A + A + L
Sbjct: 866 ETIGSAALRNAANRGEPGAAFEIGVRY-AEGRGVASDYATAAKWYERASEGGIVPATFRL 924
Query: 165 GTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
GT+Y G +KKD+ +A + +A+EKG A A
Sbjct: 925 GTLYEKGLGLKKDVETARNLYLQAAEKGSAKA 956
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+ A ++ PGA + +G Y G V D A+A + RASE G A G+L +G+
Sbjct: 873 LRNAANRGEPGAAFEIGVRYAEGRGVASDYATAAKWYERASEGGIVPATFRLGTLYEKGL 932
Query: 209 QVPECLTKLNAKRVSAAKKARANLESNL---------MNPVEKAKEQ-FEVAAQAGC--- 255
+ + + + AA+K A NL P K+ Q F AA+ G
Sbjct: 933 GLKKDVETARNLYLQAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWFRKAAERGVADS 992
Query: 256 --NLGLRWLQRIEEEE 269
NLG+ + + I E+
Sbjct: 993 QFNLGILYARGIGVEQ 1008
>gi|421656421|ref|ZP_16096728.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408505405|gb|EKK07128.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 288
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAAN GD DAQ L Q+ +A + KA Q A Y LG +YL GD
Sbjct: 162 LDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKAAVQGDIDAQYNLGLMYLLGDG 221
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+K+D A A F A+ +G + A G + G+ V + L+
Sbjct: 222 IKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDGLGVDKNLS 263
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AN G +AQY LG L + N+Y++ D +A Y+ EKA Q +L LG Y G +
Sbjct: 92 SANQGYVNAQYNLGL-LYMGNEYIKPDYVKAKYWYEKAAAQGDIASLNELGNFYSKGLGI 150
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
K+D A+ + A+ G + A ++ L G V + + + + AA + + +
Sbjct: 151 KQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKAAVQGDIDAQY 210
Query: 235 NL 236
NL
Sbjct: 211 NL 212
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQY LG + + Q QA + A +Q A Y LG +Y G V
Sbjct: 200 AAVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDGLGVD 259
Query: 176 KDIASALWCFHRASEKGHAGAA 197
K+++ A F +++E G++ AA
Sbjct: 260 KNLSLARIWFEKSAEVGNSYAA 281
>gi|392545490|ref|ZP_10292627.1| Sel1 domain-containing protein [Pseudoalteromonas rubra ATCC 29570]
Length = 555
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 5/173 (2%)
Query: 69 KTAKENFELAL-----EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPD 123
+T ++N+E A+ A+ HA+Y L ++ L AA G
Sbjct: 38 ETVEQNYERAVYWFGKAAEQGEAHAQYSLGYMYRMGQYFEQSDEAAVKLYQQAAEQGHAS 97
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY LG QSD +A KA Q + A Y LG +Y G+ +KK+ A+
Sbjct: 98 AQYNLGVLCVRGEGITQSDTKAVKLYRKAAQQGNALAQYELGFMYARGNGIKKNDTEAVK 157
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+ AS++G+ A G + G V + + N AAKK + NL
Sbjct: 158 WYRLASDQGNTRALCNLGYMYDFGRGVKQSSKEANKYYRLAAKKGNNRAQLNL 210
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L++ A GD AQ L Q+ ++A Y+ KA +Q A Y LG +Y G
Sbjct: 15 LIEQAQSGDAVAQNTLADAYYFGETVEQNYERAVYWFGKAAEQGEAHAQYSLGYMYRMGQ 74
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
++ +A+ + +A+E+GHA A G L +RG E +T+ + K V +KA
Sbjct: 75 YFEQSDEAAVKLYQQAAEQGHASAQYNLGVLCVRG----EGITQSDTKAVKLYRKA 126
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 9/197 (4%)
Query: 23 QHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEAD 82
Q+ +R ++ K A + A +L + R+ Y E +D + L + A A+
Sbjct: 42 QNYERAVYWFGKAAEQGEAHAQYSLGYMYRMGQYFEQSDEAAVKLYQQA---------AE 92
Query: 83 NSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD 142
+ A+Y L L ++ L AA G+ AQYELG N ++D
Sbjct: 93 QGHASAQYNLGVLCVRGEGITQSDTKAVKLYRKAAQQGNALAQYELGFMYARGNGIKKND 152
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
+A + A DQ + AL LG +Y G VK+ A + A++KG+ A +
Sbjct: 153 TEAVKWYRLASDQGNTRALCNLGYMYDFGRGVKQSSKEANKYYRLAAKKGNNRAQLNLAF 212
Query: 203 LLLRGVQVPECLTKLNA 219
+G V + + A
Sbjct: 213 SYFQGDGVKQSYVRTKA 229
>gi|365844135|ref|ZP_09384999.1| Sel1 repeat protein [Flavonifractor plautii ATCC 29863]
gi|364566210|gb|EHM43908.1| Sel1 repeat protein [Flavonifractor plautii ATCC 29863]
Length = 998
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L LE + + +Y + + L G +A A+ +G+P AQY+L R+ +
Sbjct: 622 LELEQQSHDDKLQYRIGWMLLHGVGTGKDEAAAREWFEQASKLGNPHAQYQL-ARMIFND 680
Query: 137 DYVQSDQ--QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
+Q QA ++ KA + A Y LG +Y G V+KDI A+ F A+ K ++
Sbjct: 681 PSSTPEQTAQALEWLTKAAEAGQDCAQYALGKIYRDGQGVEKDIQKAVALFTLAATKENS 740
Query: 195 GAAIAYGSLLLRG 207
AA A G L L G
Sbjct: 741 FAAFALGKLYLAG 753
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVPGACK---AMGAALLVDAANMGDPDAQYE 127
A+E FE A + N HA+Y L+++ ++ P + A L AA G AQY
Sbjct: 654 AREWFEQA--SKLGNPHAQYQLARM--IFNDPSSTPEQTAQALEWLTKAAEAGQDCAQYA 709
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD-CVKKDIASALWCFH 186
LG R + Q+A A + + A + LG +YL GD + +D A+AL
Sbjct: 710 LGKIYRDGQGVEKDIQKAVALFTLAATKENSFAAFALGKLYLAGDAALPRDPAAALKWLT 769
Query: 187 RASEKGHAGAAIAYGSLLLRGVQ-VPECLT 215
A+E G+ A G L+L+G +P+ +T
Sbjct: 770 YAAELGNQFAQYRLGKLVLKGDNGIPKNVT 799
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
A+Y LG D + +A ++++ + + A Y LG + L G+ KD+ +A+
Sbjct: 816 AEYALGLVYLKGEDVPKDSVKALSLLKRSAGRGNQFAQYRLGKLLLQGEDAPKDVKAAIR 875
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
A+E+G+ A A G L L G +VP+
Sbjct: 876 WLTAAAEQGNQYAQYALGKLYLLGKEVPK 904
>gi|403676044|ref|ZP_10938109.1| hypothetical protein ANCT1_15381 [Acinetobacter sp. NCTC 10304]
Length = 288
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAAN GD DAQ L Q+ +A + KA Q A Y LG +YL GD
Sbjct: 162 LDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKAAVQGDIDAQYNLGLMYLLGDG 221
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+K+D A A F A+ +G + A G + G+ V + L+
Sbjct: 222 IKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDGLGVDKNLS 263
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AN G +AQY LG L + N Y++ D +A Y+ EKA Q +L LG Y G +
Sbjct: 92 SANQGYVNAQYNLGL-LYMGNGYIKPDYVKAKYWYEKAAAQGDIASLNKLGNFYSKGLGI 150
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
K+D A + A+ G + A ++ L G V + + + + AA + + +
Sbjct: 151 KQDYQKATKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKAAVQGDIDAQY 210
Query: 235 NL 236
NL
Sbjct: 211 NL 212
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQY LG + + Q QA + A +Q A Y LG +Y G V
Sbjct: 200 AAVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDGLGVD 259
Query: 176 KDIASALWCFHRASEKGHAGAA 197
K+++ A F +++E G++ AA
Sbjct: 260 KNLSLARIWFEKSAEVGNSYAA 281
>gi|417666054|ref|ZP_12315615.1| tetratricopeptide repeat family protein [Escherichia coli STEC_O31]
gi|397786390|gb|EJK97227.1| tetratricopeptide repeat family protein [Escherichia coli STEC_O31]
Length = 328
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ+ LG N Q QQA + EKA +Q A + LG +Y G+ VK
Sbjct: 130 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVK 189
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A F +A+ + A G + G V + + AA+K + + N
Sbjct: 190 QNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQYN 249
Query: 236 L 236
L
Sbjct: 250 L 250
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +AQ+ LG Q+ +QA + EKA Q A Y LG +Y G V
Sbjct: 166 AAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVT 225
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARANLE 233
+ A F +A+EKGH A G + G V + + A ++ ++ A+A E
Sbjct: 226 QSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE 285
Query: 234 SNLMN--------PVEKAKEQFEVAAQAGCNLGLR 260
+MN +++A+ +E + CN GL+
Sbjct: 286 LGVMNELGQGESIDLKQARHYYERS----CNNGLK 316
>gi|354594462|ref|ZP_09012501.1| hypothetical protein CIN_11970 [Commensalibacter intestini A911]
gi|353672138|gb|EHD13838.1| hypothetical protein CIN_11970 [Commensalibacter intestini A911]
Length = 236
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AA GD AQY LG + Q +AF + K+ +Q + AL +G +Y G
Sbjct: 70 FTKAAEQGDAQAQYILGLMYYLGRGIPQDYTKAFEWFHKSAEQGNIDALVGIGYLYAEGR 129
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA-- 230
V +D A+ F +A+++G A A + ++ G VP+ K AA K A
Sbjct: 130 GVPQDYFEAIKWFSKAADQGDAEAQLKLANMYENGQGVPQDYAKAIELYTQAANKGNAIA 189
Query: 231 ---------NLESNLMNPVEKAKEQFEVA----AQAGCN 256
+ N++ EKAK ++ A +Q GC+
Sbjct: 190 FLGIGAIYEQGKKNILQDKEKAKVYYKQACLNKSQDGCD 228
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 10/171 (5%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A L A+ GD AQ +G + +AF KA +Q A Y+LG +Y
Sbjct: 32 AALEQKASQGDVKAQLNVGLMYFRGEGVSEDGAKAFENFTKAAEQGDAQAQYILGLMYYL 91
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G + +D A FH+++E+G+ A + G L G VP+ + AA + A
Sbjct: 92 GRGIPQDYTKAFEWFHKSAEQGNIDALVGIGYLYAEGRGVPQDYFEAIKWFSKAADQGDA 151
Query: 231 NLESNLMNPVE----------KAKEQFEVAAQAGCNLGLRWLQRIEEEEKR 271
+ L N E KA E + AA G + + I E+ K+
Sbjct: 152 EAQLKLANMYENGQGVPQDYAKAIELYTQAANKGNAIAFLGIGAIYEQGKK 202
>gi|68249919|ref|YP_249031.1| hypothetical protein NTHI1567 [Haemophilus influenzae 86-028NP]
gi|68058118|gb|AAX88371.1| hypothetical protein NTHI1567 [Haemophilus influenzae 86-028NP]
Length = 219
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQ LG + Q +A + KA +Q + A LG +Y G +K
Sbjct: 91 AAEQGDADAQLNLGAMYAIGRGVKQDGVEAVKWFRKAAEQGNAKAQNGLGMMYDGGLGIK 150
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
+D A+ +A+E+G+ GA + G L +GVQV + L K
Sbjct: 151 QDYFKAVKWHRKAAEQGYGGAQVMLGFSYLSGKGVQVNKSLAK 193
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A GD AQ LG Q D +A + KA +Q A LG +Y G
Sbjct: 51 LWLPLAEQGDAQAQGGLGMMYERGLGVKQDDFKAVNWYRKAAEQGDADAQLNLGAMYAIG 110
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
VK+D A+ F +A+E+G+A A G + G+ + + K
Sbjct: 111 RGVKQDGVEAVKWFRKAAEQGNAKAQNGLGMMYDGGLGIKQDYFK 155
>gi|345876918|ref|ZP_08828679.1| hypothetical protein Rifp1Sym_ai00570 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226118|gb|EGV52460.1| hypothetical protein Rifp1Sym_ai00570 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 235
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
AN GD +A Y LG N ++A + E A Q H A + LG Y TG+ +KK
Sbjct: 62 ANAGDAEAAYNLGWLYANGNGLRVDVEKAIRWWEAAAMQGHLEAQFTLGLTYTTGEGIKK 121
Query: 177 DIASALWCFHRASEKGHAGAA------IAYGSLL----LRGV-QVPECLTKLNAKRVSAA 225
D +AL F +A+ G A + GS L L G+ Q+P +L K A
Sbjct: 122 DTEAALRWFLKAARGGQTDAQEIIREFVQVGSSLVDEHLNGILQLPWIGDRLRVKVKRAN 181
Query: 226 KKARANLESNLMNPVEKAKEQFEVA 250
+A + ++ V + E E+
Sbjct: 182 LRAGPGTGNEIVETVTEGSELVEIG 206
>gi|402493715|ref|ZP_10840465.1| Sel1 domain-containing protein repeat-containing protein
[Aquimarina agarilytica ZC1]
Length = 500
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+L AN G+P+A Y +G + + + + ++AF YIEK+ Q +P A LG +Y G
Sbjct: 57 ILSQCANDGNPEALYIIGMLYKNGHIFEKDTKKAFSYIEKSALQNNPKATCELGILYKDG 116
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
K + +A+ F +A + G+ A+ + G L +G
Sbjct: 117 IGCKLNFNTAIDWFRKAYDLGNHKASYSLGYLYFKGF 153
>gi|350272852|ref|YP_004884160.1| hypothetical protein OBV_44560 [Oscillibacter valericigenes
Sjm18-20]
gi|348597694|dbj|BAL01655.1| hypothetical protein OBV_44560 [Oscillibacter valericigenes
Sjm18-20]
Length = 933
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A N +A+Y L K+ L+ + +A+ A + AA G+ AQY LG +L +
Sbjct: 634 LGQSAQLGNVNAQYLLGKVCLETGIGNPMQAV--AWMTKAAEAGNAGAQYALG-KLYRDG 690
Query: 137 DYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+V+ D Q+A A Q + A Y LG +Y+ G + K++ A+ +S+ G+A
Sbjct: 691 THVEKDIQKAVAMFTVAAKQKNEYAAYQLGRLYIAGTDIPKNVPEAVKWLTLSSDLGNAY 750
Query: 196 AAIAYGSLLLRGVQVPE 212
A A L L G +P+
Sbjct: 751 AQYALAKLYLTGDGIPK 767
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N A+Y L KL+ HV + A+ AA + A Y+LG D
Sbjct: 672 AEAGNAGAQYALGKLYRDGTHVEKDIQK-AVAMFTVAAKQKNEYAAYQLGRLYIAGTDIP 730
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
++ +A ++ + D + A Y L +YLTGD + K++ A+ F ++EK + AA
Sbjct: 731 KNVPEAVKWLTLSSDLGNAYAQYALAKLYLTGDGIPKNVGEAIRLFTLSAEKKNEFAAYQ 790
Query: 200 YGSLLLRGVQVPE 212
G L L+ VP+
Sbjct: 791 LGKLYLQREDVPK 803
>gi|409913039|ref|YP_006891504.1| TPR domain-containing protein, SEL1 repeat subfamily [Geobacter
sulfurreducens KN400]
gi|298506625|gb|ADI85348.1| TPR domain protein, SEL1 repeat subfamily [Geobacter sulfurreducens
KN400]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 33/194 (17%)
Query: 101 VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
V C + + AA GDP +Q+++G +Q ++A + A +Q H A
Sbjct: 22 VLAGCAGVNIEKVKQAATQGDPASQFQMGVAYDSGRGVIQDIKEAAKWYRAAAEQGHAEA 81
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAK 220
LG++Y G+ V +D A + +A+ +G+A A + L G+ +P
Sbjct: 82 QNSLGSLYQAGEGVSQDYLMAKVWYEKAANQGNAMAKNSLAYLYDLGLGIP--------- 132
Query: 221 RVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEK---------- 270
A+ K A L E+A EQ E+ A NLG+ Q E EK
Sbjct: 133 ---ASPKVAAQL-------YEQAAEQGELTAM--MNLGILLTQGKPEVEKDYIEAYKWLE 180
Query: 271 --RLLTESSRIETL 282
R T+SS+ TL
Sbjct: 181 LARFYTQSSKDTTL 194
>gi|290970124|ref|XP_002668039.1| predicted protein [Naegleria gruberi]
gi|284081105|gb|EFC35295.1| predicted protein [Naegleria gruberi]
Length = 296
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Query: 88 ARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFY 147
++Y+LS ++ K LL ++A+ G +Q LG R + QS+++AF
Sbjct: 2 SKYYLSHMYQKGLGVPISNEKSLQLLYESASHGFVHSQLHLGLRYKNGEGIEQSNEKAFE 61
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+IEKAV+Q + A LG +YL G + + A CF +A+ + + A G G
Sbjct: 62 WIEKAVEQDYAQAQNHLGILYLKGKGIYQSYDKACECFQKAANQNNKCAQYNLGLRYKNG 121
Query: 208 VQVPECLTKLNAKRVSAAKK--ARANLESNLM--------NPVEKAKEQFEVA-----AQ 252
+ + K +A + +A E +M +EKA E FE + AQ
Sbjct: 122 QGIEQSYEKAFEFFQKSANQDHIQAQTELGIMFYHGQGVEQSLEKAFEWFEKSAVQGYAQ 181
Query: 253 AGCNLGL 259
A LGL
Sbjct: 182 AQSYLGL 188
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN + AQY LG R + QS ++AF + +K+ +Q H A LG ++ G V+
Sbjct: 102 AANQNNKCAQYNLGLRYKNGQGIEQSYEKAFEFFQKSANQDHIQAQTELGIMFYHGQGVE 161
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+ + A F +++ +G+A A G L +G
Sbjct: 162 QSLEKAFEWFEKSAVQGYAQAQSYLGLLYAKG 193
>gi|392374072|ref|YP_003205905.1| Sel1 domain protein repeat-containing protein [Candidatus
Methylomirabilis oxyfera]
gi|258591765|emb|CBE68066.1| putative Sel1 domain protein repeat-containing protein [Candidatus
Methylomirabilis oxyfera]
Length = 370
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFY----YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
AQ+ LG RV Q Q FY + E+A + + LG +Y G V K+
Sbjct: 136 AQWTLGSMYRVGKIGGQGVDQDFYEARRWFERAANNGEHLGMESLGRLYAEGKGVAKNYL 195
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNP 239
A+ RA EKG+ GA +A GS+ G VP+ N +R + ANL +
Sbjct: 196 VAIKWLERAIEKGNRGALVALGSMYEHGKGVPK-----NEERARELYRKAANLGDYVAKR 250
Query: 240 VEKAKEQFEVA-AQAGCNLGLRWL 262
+ + K E A+A +G RWL
Sbjct: 251 ILEEKPLAEKGNAEAQFWIGERWL 274
>gi|298160887|dbj|BAJ09392.1| hypothetical protein [Comamonas testosteroni]
Length = 445
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG- 171
+V+AA GD AQYELG ++ A ++ A + H + YLLG VY+ G
Sbjct: 28 MVNAAKTGDVAAQYELGKAYLYGKGVEKNADDALRWLRLAAEHNHAPSQYLLGLVYVLGA 87
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ VKKD + L H+A+ G+ A G++ L+G V
Sbjct: 88 EGVKKDPEAGLAHIHQAANAGNLDAQNLLGTIYLKGEAV 126
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 39/81 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQY LG +S QA + A +Q A Y LGT+Y G VK
Sbjct: 358 AANQGYAKAQYNLGTLYENGEGVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVK 417
Query: 176 KDIASALWCFHRASEKGHAGA 196
K+ A RA+E+GHA A
Sbjct: 418 KNAKQAREWLQRAAEQGHAPA 438
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+++A G+ AQY +G + + Q + +A + A +Q + A Y LGT+Y G+
Sbjct: 319 LNSALKGNVLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGE 378
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV-------QVPECLTKLNAKRVSAA 225
V K +A AL + A+E+ A A A G+L G+ Q E L + + + A
Sbjct: 379 GVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNAKQAREWLQRAAEQGHAPA 438
Query: 226 KKARANL 232
KKA A L
Sbjct: 439 KKALAQL 445
>gi|237746477|ref|ZP_04576957.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377828|gb|EEO27919.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 523
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 83/212 (39%), Gaps = 23/212 (10%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVP-----GACKAMGAALLVD----------AANM 119
+E L A W +K K + P G G ++ D AA
Sbjct: 270 YETGLGVGKDEPRAASWYTKAAEKGYAPAQNNLGYLYDSGTGVMQDFITARKWYEAAAAQ 329
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G+ A + LG + + Q +A + KA +Q HP AL LG YL G V D
Sbjct: 330 GNVSAMFNLGQLHYLGHGTPQDYARAAGWFAKAAEQGHPKALNNLGMAYLDGMGVATDRV 389
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSA-----AKKARANLES 234
A F +A+++G+A A +L VQ PE LTK N + A K+ AN +
Sbjct: 390 RAGHYFLKAAKRGNAHAQYNLATLY---VQHPEALTKANRAKTDALARKWFGKSAANGHA 446
Query: 235 NLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIE 266
M + ++ + L +W QR +
Sbjct: 447 AAMEYLADVYRYGKLGQRPNAKLAEKWQQRAD 478
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P+AQY+LG S QA + KA + A LG Y G VK
Sbjct: 182 AATAGIPNAQYKLGYLYEKGIGVHASPAQALLWYRKAAEGGIASAQTRLGRAYSEGRGVK 241
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A F++A+E+G+ A A L G+ V + + + AA+K A ++N
Sbjct: 242 RDDLEAARWFYKAAEQGNVQAQTALAWLYETGLGVGKDEPRAASWYTKAAEKGYAPAQNN 301
Query: 236 L----------MNPVEKAKEQFEVAAQAG-----CNLG 258
L M A++ +E AA G NLG
Sbjct: 302 LGYLYDSGTGVMQDFITARKWYEAAAAQGNVSAMFNLG 339
>gi|256820691|ref|YP_003141970.1| Sel1 domain-containing protein repeat-containing protein
[Capnocytophaga ochracea DSM 7271]
gi|256582274|gb|ACU93409.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea DSM 7271]
Length = 278
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A AA G +AQ +LG QSD+QA + +KA DQ A LG Y
Sbjct: 111 AYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYY 170
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V + + A++ + +A+ +G A GS +G +P+ TK
Sbjct: 171 KGLGVAQSDSDAVFWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTK 217
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +Q +LG VQS ++A Y+ +KA +Q + A LG Y G VK
Sbjct: 81 AAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVK 140
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ A+ F +A+++ A A G +G+ V +
Sbjct: 141 QSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQ 177
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD +AQ LG QS +A ++ EKA +Q A +LG Y G V
Sbjct: 189 AANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVD 248
Query: 176 KDIASALWCFHRA 188
K A++ F +
Sbjct: 249 KSQKRAIYWFEKG 261
>gi|195449906|ref|XP_002072278.1| GK22768 [Drosophila willistoni]
gi|194168363|gb|EDW83264.1| GK22768 [Drosophila willistoni]
Length = 817
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A+ MGDP Q LG + +A Y +A DQ LGT+Y TG+ VK
Sbjct: 392 ASEMGDPVGQSGLGLMYLKGLGMPKDTNKALSYFTQAADQGWVDGQLQLGTMYFTGNGVK 451
Query: 176 KDIASALWCFHRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
D A+ F+ A++ GH G AYG +LR K A+R + +
Sbjct: 452 TDYKLAMKYFNLATQSGHVLAYYNLGVMHAYGMGMLRSCPAAVEFFKNVAERGRWSTRLM 511
Query: 230 ANLESNLMNPVEKAKEQFEVAAQAG 254
N +++A Q+ + A+ G
Sbjct: 512 HAYSDYKQNRIDEAYMQYALMAEVG 536
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCV 174
A+ GD +Q LG +Q D Q+A Y +A + + LG +YL G + +
Sbjct: 319 ADKGDVQSQVGLGQLYYQGGKAIQQDHQKALEYFTQAANAGNAIGFAFLGKLYLEGSEQI 378
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K D +A F +ASE G G + L+G+ +P+ K
Sbjct: 379 KADNETAFKYFSKASEMGDPVGQSGLGLMYLKGLGMPKDTNK 420
>gi|397632650|gb|EJK70646.1| hypothetical protein THAOC_07976 [Thalassiosira oceanica]
Length = 234
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGD-CVKKDIASALWCFHRASEKGHAGAAIAYGS 202
Q IEK VD P A+Y LG Y G V KD+ A+ + RASE G GA + G
Sbjct: 65 QTVSMIEKRVDAGDPVAIYHLGKHYADGSYGVTKDVTRAVELYERASELGSKGAHLNLGC 124
Query: 203 LLLRGVQVPECLTK----LNAKRVSAAKKARANL---ESNLMNPVEKAKEQFEVAAQAG 254
L L G V + K L A V AR NL E+N N + A + + +AA+ G
Sbjct: 125 LYLVGADVEKDTAKAIRHLEAAAVKGVVTARHNLGVVENNAGN-YDLALQHYMIAAKMG 182
>gi|421359581|ref|ZP_15809874.1| hypothetical protein SEEE3139_16117 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421363847|ref|ZP_15814085.1| hypothetical protein SEEE0166_14554 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421366889|ref|ZP_15817091.1| hypothetical protein SEEE0631_06863 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421386729|ref|ZP_15836735.1| hypothetical protein SEEE6622_15584 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421391069|ref|ZP_15841040.1| hypothetical protein SEEE6670_14691 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421395437|ref|ZP_15845373.1| hypothetical protein SEEE6426_14026 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421402324|ref|ZP_15852182.1| hypothetical protein SEEE7246_03645 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421425080|ref|ZP_15874717.1| hypothetical protein SEEE5101_04629 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421434311|ref|ZP_15883861.1| hypothetical protein SEEE5518_05103 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421442055|ref|ZP_15891515.1| hypothetical protein SEEE1618_21414 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|436809314|ref|ZP_20528694.1| hypothetical protein SEEE1882_12799 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436814933|ref|ZP_20532484.1| hypothetical protein SEEE1884_09103 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436844355|ref|ZP_20538113.1| hypothetical protein SEEE1594_14808 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436854314|ref|ZP_20543948.1| hypothetical protein SEEE1566_21479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855961|ref|ZP_20545086.1| hypothetical protein SEEE1580_04543 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436864461|ref|ZP_20550428.1| hypothetical protein SEEE1543_09000 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870070|ref|ZP_20553876.1| hypothetical protein SEEE1441_03900 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436877561|ref|ZP_20558489.1| hypothetical protein SEEE1810_04555 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886500|ref|ZP_20562920.1| hypothetical protein SEEE1558_04166 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436893720|ref|ZP_20567627.1| hypothetical protein SEEE1018_05039 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436901468|ref|ZP_20572378.1| hypothetical protein SEEE1010_06479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436912494|ref|ZP_20578323.1| hypothetical protein SEEE1729_13970 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436920500|ref|ZP_20583096.1| hypothetical protein SEEE0895_15270 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436926836|ref|ZP_20586662.1| hypothetical protein SEEE0899_10364 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436936443|ref|ZP_20591883.1| hypothetical protein SEEE1457_14021 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436950878|ref|ZP_20599933.1| hypothetical protein SEEE0968_09249 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436961797|ref|ZP_20605171.1| hypothetical protein SEEE1444_12850 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436968986|ref|ZP_20608107.1| hypothetical protein SEEE1445_04837 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436984794|ref|ZP_20614669.1| hypothetical protein SEEE1559_15545 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436989137|ref|ZP_20616438.1| hypothetical protein SEEE1565_01574 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437000389|ref|ZP_20620618.1| hypothetical protein SEEE1808_00070 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437021068|ref|ZP_20627803.1| hypothetical protein SEEE1811_13655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437032524|ref|ZP_20632005.1| hypothetical protein SEEE0956_12055 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437044309|ref|ZP_20637262.1| hypothetical protein SEEE1455_15789 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437047314|ref|ZP_20638829.1| hypothetical protein SEEE1575_01002 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437058965|ref|ZP_20645812.1| hypothetical protein SEEE1725_13804 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437064993|ref|ZP_20648767.1| hypothetical protein SEEE1745_05890 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437076950|ref|ZP_20655158.1| hypothetical protein SEEE1791_15421 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437082190|ref|ZP_20658238.1| hypothetical protein SEEE1795_08290 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437091854|ref|ZP_20663454.1| hypothetical protein SEEE6709_12122 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437113693|ref|ZP_20668895.1| hypothetical protein SEEE9058_16748 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437125485|ref|ZP_20674012.1| hypothetical protein SEEE0816_20010 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437127503|ref|ZP_20674825.1| hypothetical protein SEEE0819_01099 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437144318|ref|ZP_20684932.1| hypothetical protein SEEE3089_06551 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437170136|ref|ZP_20700231.1| hypothetical protein SEEEN202_15778 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437267566|ref|ZP_20721318.1| hypothetical protein SEEEL909_05629 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437280837|ref|ZP_20728214.1| hypothetical protein SEEEL913_17758 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437312058|ref|ZP_20736166.1| hypothetical protein SEEE7015_12755 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437401245|ref|ZP_20751717.1| hypothetical protein SEEE2217_00180 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437442143|ref|ZP_20757720.1| hypothetical protein SEEE4018_07831 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437460843|ref|ZP_20761796.1| hypothetical protein SEEE6211_05510 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437484413|ref|ZP_20769188.1| hypothetical protein SEEE4441_20326 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437497280|ref|ZP_20773465.1| hypothetical protein SEEE4647_19321 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437516556|ref|ZP_20778170.1| hypothetical protein SEEE9845_20704 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437532584|ref|ZP_20780907.1| hypothetical protein SEEE9317_11502 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437550771|ref|ZP_20783591.1| hypothetical protein SEEE0116_02048 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437572112|ref|ZP_20788874.1| hypothetical protein SEEE1117_05830 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437601620|ref|ZP_20797852.1| hypothetical protein SEEE0268_05798 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437649827|ref|ZP_20809573.1| hypothetical protein SEEE0436_19791 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437663748|ref|ZP_20814102.1| hypothetical protein SEEE1319_19031 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437677108|ref|ZP_20817103.1| hypothetical protein SEEE4481_11397 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437693240|ref|ZP_20821388.1| hypothetical protein SEEE6297_09690 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437710574|ref|ZP_20826518.1| hypothetical protein SEEE4220_13048 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437726530|ref|ZP_20830113.1| hypothetical protein SEEE1616_07946 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|395985204|gb|EJH94377.1| hypothetical protein SEEE3139_16117 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395985322|gb|EJH94492.1| hypothetical protein SEEE0166_14554 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395989544|gb|EJH98678.1| hypothetical protein SEEE0631_06863 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|396011370|gb|EJI20280.1| hypothetical protein SEEE6622_15584 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396012076|gb|EJI20974.1| hypothetical protein SEEE6426_14026 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396012479|gb|EJI21375.1| hypothetical protein SEEE6670_14691 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396031861|gb|EJI40586.1| hypothetical protein SEEE7246_03645 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396058676|gb|EJI67137.1| hypothetical protein SEEE5101_04629 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396060917|gb|EJI69358.1| hypothetical protein SEEE5518_05103 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396062732|gb|EJI71143.1| hypothetical protein SEEE1618_21414 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|434967131|gb|ELL59966.1| hypothetical protein SEEE1882_12799 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434973049|gb|ELL65437.1| hypothetical protein SEEE1884_09103 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434978941|gb|ELL70933.1| hypothetical protein SEEE1594_14808 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434983117|gb|ELL74925.1| hypothetical protein SEEE1566_21479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434992175|gb|ELL83645.1| hypothetical protein SEEE1580_04543 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434995496|gb|ELL86812.1| hypothetical protein SEEE1543_09000 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435002398|gb|ELL93463.1| hypothetical protein SEEE1441_03900 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435008445|gb|ELL99268.1| hypothetical protein SEEE1810_04555 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011743|gb|ELM02446.1| hypothetical protein SEEE1558_04166 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435018716|gb|ELM09178.1| hypothetical protein SEEE1018_05039 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435020902|gb|ELM11291.1| hypothetical protein SEEE1010_06479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435026739|gb|ELM16870.1| hypothetical protein SEEE1729_13970 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435028019|gb|ELM18111.1| hypothetical protein SEEE0895_15270 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435036677|gb|ELM26496.1| hypothetical protein SEEE0899_10364 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435039281|gb|ELM29062.1| hypothetical protein SEEE1457_14021 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435050936|gb|ELM40440.1| hypothetical protein SEEE1444_12850 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435051345|gb|ELM40847.1| hypothetical protein SEEE0968_09249 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435059087|gb|ELM48377.1| hypothetical protein SEEE1445_04837 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435063425|gb|ELM52577.1| hypothetical protein SEEE1559_15545 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435071395|gb|ELM60338.1| hypothetical protein SEEE1565_01574 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435076307|gb|ELM65092.1| hypothetical protein SEEE1808_00070 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435078668|gb|ELM67394.1| hypothetical protein SEEE1811_13655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435079036|gb|ELM67750.1| hypothetical protein SEEE0956_12055 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435081513|gb|ELM70155.1| hypothetical protein SEEE1455_15789 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435094778|gb|ELM83117.1| hypothetical protein SEEE1725_13804 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435100486|gb|ELM88656.1| hypothetical protein SEEE1575_01002 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435100735|gb|ELM88903.1| hypothetical protein SEEE1745_05890 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435103788|gb|ELM91862.1| hypothetical protein SEEE1791_15421 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435110536|gb|ELM98453.1| hypothetical protein SEEE1795_08290 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435112760|gb|ELN00625.1| hypothetical protein SEEE6709_12122 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435115991|gb|ELN03742.1| hypothetical protein SEEE9058_16748 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435118144|gb|ELN05824.1| hypothetical protein SEEE0816_20010 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435129607|gb|ELN16898.1| hypothetical protein SEEE0819_01099 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435139309|gb|ELN26313.1| hypothetical protein SEEE3089_06551 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435147916|gb|ELN34668.1| hypothetical protein SEEEN202_15778 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435170325|gb|ELN56081.1| hypothetical protein SEEEL913_17758 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435176082|gb|ELN61484.1| hypothetical protein SEEEL909_05629 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435183190|gb|ELN68165.1| hypothetical protein SEEE7015_12755 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435206222|gb|ELN89766.1| hypothetical protein SEEE2217_00180 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435211619|gb|ELN94707.1| hypothetical protein SEEE4018_07831 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435217036|gb|ELN99486.1| hypothetical protein SEEE4441_20326 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435220535|gb|ELO02817.1| hypothetical protein SEEE6211_05510 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435225619|gb|ELO07310.1| hypothetical protein SEEE4647_19321 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435228625|gb|ELO10049.1| hypothetical protein SEEE9845_20704 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435242918|gb|ELO23219.1| hypothetical protein SEEE9317_11502 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435246455|gb|ELO26457.1| hypothetical protein SEEE0116_02048 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435247752|gb|ELO27681.1| hypothetical protein SEEE1117_05830 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435260632|gb|ELO39822.1| hypothetical protein SEEE0268_05798 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435266196|gb|ELO44963.1| hypothetical protein SEEE1319_19031 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435268404|gb|ELO46990.1| hypothetical protein SEEE0436_19791 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435275771|gb|ELO53828.1| hypothetical protein SEEE4481_11397 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435279387|gb|ELO57168.1| hypothetical protein SEEE6297_09690 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435288703|gb|ELO65698.1| hypothetical protein SEEE4220_13048 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435291701|gb|ELO68508.1| hypothetical protein SEEE1616_07946 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
Length = 718
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 503 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 555
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 556 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 606
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 607 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 652
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 621 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 680
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 681 GDGVEKDLNKA 691
>gi|56550964|ref|YP_161803.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542538|gb|AAV88692.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 375
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
V A++ + +E G R ++ QS QA Y +KA D H A + LG +Y G
Sbjct: 34 VKTADVKKANDNFESGLRYYHGHNVAQSYSQAREYFQKAADLGHAEAQFYLGALYERGKG 93
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE----CLTKLNAKRVSAAKKAR 229
V ++ +A + +A+++G A GS+ GV VP+ LT L K A+
Sbjct: 94 VARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRAAGQGDKVAQ 153
Query: 230 ANL 232
NL
Sbjct: 154 TNL 156
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++G +AQ+ LG ++ + AF + +KA DQ A +G++Y G V
Sbjct: 72 AADLGHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVP 131
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ +AL RA+ +G A G + +G+ P+ AA + A E N
Sbjct: 132 QNFQAALTWLQRAAGQGDKVAQTNLGDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYN 191
Query: 236 L 236
L
Sbjct: 192 L 192
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G A+Y LG Q A + +KA DQ P A Y + +Y G V
Sbjct: 180 AAAQGYALAEYNLGVMYSQGQGVTQDMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVV 239
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLL 204
+D AL + +A+++G A + SLL
Sbjct: 240 QDQKVALAWYQKAADQGFVKAQLNLASLL 268
>gi|254472523|ref|ZP_05085923.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
JE062]
gi|211958806|gb|EEA94006.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
JE062]
Length = 601
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A AA AA G PDAQY LG Q + A ++ A +Q H A Y +G
Sbjct: 387 AEAAAWYHFAAKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQYRIGR 446
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
Y G V+++ A ++ A+ + HA A A G + G+ VP+ + + AA+
Sbjct: 447 AYEDGVGVEQNHTEAANWYYLAATQNHAKAQFALGRVYAIGLGVPQDEVEAAKWVLHAAE 506
Query: 227 KARANLE------------SNLMNPVEKAKEQFEVAAQAGCNLGLR 260
R LE S + +E+A F +AA+ G L+
Sbjct: 507 --RGYLEAQYRIGLAFYKGSGVKQNIERAYIWFYIAAENGSKPALK 550
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVP-GACKAMGAAL--LVDAANMGDPDAQYE 127
A E F LA E ++N A++ L ++ Y + G + AL + AA G DAQY
Sbjct: 317 AAEKFRLAAEQGHAN--AQFNLGRI---YEIGLGVDQDYNEALKWYIRAAEQGVVDAQYN 371
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
L Q +A + A Q HP A Y LG +Y TG V++D A+A
Sbjct: 372 LAVMYANGTGISQDLAEAAAWYHFAAKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRL 431
Query: 188 ASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+ +GHA A G GV V + T+
Sbjct: 432 AANQGHAEAQYRIGRAYEDGVGVEQNHTE 460
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 65 IPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLVDAANMGDPD 123
+P T N+ L A+ + A+Y L+ L+ K VP + K + AA+ G P
Sbjct: 58 VPQDYTKAANW-FRLAAEQGHVSAQYRLADLYHKGRGVPQSFKEAEKWYQL-AADKGHPK 115
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
A EL QSD + + Q + A Y L ++ G V KD + A
Sbjct: 116 ALSELEYLFNKGLIGPQSDDKVTMWTLHKAKQGYASAQYRLALLFHDGKGVPKDYSEAEK 175
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN----- 238
+ RA+ GH+GA + G + G V + + + AAK+ A+ + L +
Sbjct: 176 WYRRAASNGHSGAQLELGYMYANGQGVQQDYQEAEKWYLKAAKQGNADAQLELGHIYADG 235
Query: 239 -----PVEKAKEQFEVAAQAGCNLG 258
EKAKE + +AA G N+G
Sbjct: 236 RGVSRDYEKAKEWYVLAASQG-NMG 259
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A GD +QY+LG Q +A + A +Q H A Y L +Y G V
Sbjct: 36 SAEQGDFHSQYKLGILYEEAQGVPQDYTKAANWFRLAAEQGHVSAQYRLADLYHKGRGVP 95
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A + A++KGH A L +G+ P+ K+ + AK+ A+ +
Sbjct: 96 QSFKEAEKWYQLAADKGHPKALSELEYLFNKGLIGPQSDDKVTMWTLHKAKQGYASAQYR 155
Query: 236 L 236
L
Sbjct: 156 L 156
>gi|348590019|ref|YP_004874481.1| Sel1 domain-containing protein repeat-containing protein
[Taylorella asinigenitalis MCE3]
gi|347973923|gb|AEP36458.1| Sel1 domain protein repeat-containing protein [Taylorella
asinigenitalis MCE3]
Length = 215
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 76 ELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE 135
E A+EA + A+Y L+ + + V L +AN G+ AQ++LG +
Sbjct: 89 EKAVEA--GDDQAQYNLASFYFRGDVVKQDLKKAGDLFEKSANQGNVKAQHDLGSMYLMG 146
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
Q ++A +++K+ + HPG+LY LG +Y G+ + +D+ A F ++ + G
Sbjct: 147 QGKPQDIKKAAEWMQKSASKGHPGSLYNLGIMYKRGEGMPQDLGKAKEMFSKSCDIG 203
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ AQ +G L Q+ Q+ Y EKAV+ A Y L + Y GD VK
Sbjct: 55 AADQNHTVAQTNVGIMLIKGLGVDQNIQEGLKYTEKAVEAGDDQAQYNLASFYFRGDVVK 114
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D+ A F +++ +G+ A GS+ L G P+ + K
Sbjct: 115 QDLKKAGDLFEKSANQGNVKAQHDLGSMYLMGQGKPQDIKK 155
>gi|237746421|ref|ZP_04576901.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377772|gb|EEO27863.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 300
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G+ DAQ LG ND+ Q+A + KA DQ P A +LG +Y+ G
Sbjct: 165 LEKAAANGEKDAQSFLGLIYLEGNDH-NDPQKAVELLSKAADQDEPLAQTILGIMYIQGK 223
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
VK+D A A + +E G+ AA G++ RG
Sbjct: 224 YVKQDYAKAEVLLTKGAEAGNVDAATFLGNMYYRG 258
>gi|198244754|ref|YP_002216092.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389733|ref|ZP_03216344.1| Sel1 repeat family protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205353158|ref|YP_002226959.1| hypothetical protein SG2030 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207857444|ref|YP_002244095.1| hypothetical protein SEN2004 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|375123992|ref|ZP_09769156.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|421372868|ref|ZP_15823013.1| hypothetical protein SEEE0424_14239 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421375234|ref|ZP_15825347.1| hypothetical protein SEEE3076_03330 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421382016|ref|ZP_15832067.1| hypothetical protein SEEE4917_14577 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421409229|ref|ZP_15859024.1| hypothetical protein SEEE7250_15755 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421411591|ref|ZP_15861355.1| hypothetical protein SEEE1427_04818 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421418004|ref|ZP_15867710.1| hypothetical protein SEEE2659_14485 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421422562|ref|ZP_15872230.1| hypothetical protein SEEE1757_14699 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421433049|ref|ZP_15882617.1| hypothetical protein SEEE8B1_22077 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421443056|ref|ZP_15892498.1| hypothetical protein SEEE3079_03371 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|436599859|ref|ZP_20512922.1| hypothetical protein SEE22704_06051 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436795356|ref|ZP_20522274.1| hypothetical protein SEECHS44_03213 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|437139010|ref|ZP_20681492.1| hypothetical protein SEEE3072_12042 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437151091|ref|ZP_20688968.1| hypothetical protein SEEE9163_04142 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437161822|ref|ZP_20695737.1| hypothetical protein SEEE151_15691 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437178879|ref|ZP_20704997.1| hypothetical protein SEEE3991_17238 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437180690|ref|ZP_20706148.1| hypothetical protein SEEE3618_00325 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437262114|ref|ZP_20718860.1| hypothetical protein SEEE2490_15810 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437302468|ref|ZP_20733607.1| hypothetical protein SEEE4941_22479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437330596|ref|ZP_20741760.1| hypothetical protein SEEE7927_18173 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437346687|ref|ZP_20746841.1| hypothetical protein SEEECHS4_21192 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437755484|ref|ZP_20834297.1| hypothetical protein SEEE2651_06163 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437810548|ref|ZP_20840961.1| hypothetical protein SEEE3944_15734 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437892048|ref|ZP_20849366.1| hypothetical protein SEEE5621_12234 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|438060272|ref|ZP_20856666.1| hypothetical protein SEEE5646_22608 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438081787|ref|ZP_20857621.1| hypothetical protein SEEE2625_00205 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438099190|ref|ZP_20863206.1| hypothetical protein SEEE1976_05647 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|445133062|ref|ZP_21382454.1| hypothetical protein SEEG9184_002416 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445146439|ref|ZP_21387653.1| hypothetical protein SEEDSL_020161 [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445154645|ref|ZP_21391972.1| hypothetical protein SEEDHWS_013524 [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445167556|ref|ZP_21394474.1| hypothetical protein SEE8A_008162 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445196611|ref|ZP_21400580.1| hypothetical protein SE20037_13385 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445236345|ref|ZP_21407063.1| hypothetical protein SEE10_022203 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445328554|ref|ZP_21413072.1| hypothetical protein SEE18569_001482 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445353471|ref|ZP_21421212.1| hypothetical protein SEE13_004892 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445359965|ref|ZP_21423279.1| hypothetical protein SEE23_021295 [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|197939270|gb|ACH76603.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199602178|gb|EDZ00724.1| Sel1 repeat family protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205272939|emb|CAR37878.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206709247|emb|CAR33585.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326628242|gb|EGE34585.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|395998496|gb|EJI07523.1| hypothetical protein SEEE0424_14239 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|395999116|gb|EJI08138.1| hypothetical protein SEEE4917_14577 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396005220|gb|EJI14199.1| hypothetical protein SEEE3076_03330 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396026160|gb|EJI34933.1| hypothetical protein SEEE7250_15755 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396039171|gb|EJI47799.1| hypothetical protein SEEE2659_14485 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396041877|gb|EJI50500.1| hypothetical protein SEEE1757_14699 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396045092|gb|EJI53686.1| hypothetical protein SEEE1427_04818 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396049265|gb|EJI57808.1| hypothetical protein SEEE8B1_22077 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396070840|gb|EJI79167.1| hypothetical protein SEEE3079_03371 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|434962449|gb|ELL55648.1| hypothetical protein SEECHS44_03213 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434975965|gb|ELL68235.1| hypothetical protein SEE22704_06051 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|435132532|gb|ELN19730.1| hypothetical protein SEEE3072_12042 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435144272|gb|ELN31114.1| hypothetical protein SEEE151_15691 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435144974|gb|ELN31803.1| hypothetical protein SEEE9163_04142 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435152296|gb|ELN38926.1| hypothetical protein SEEE3991_17238 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435162485|gb|ELN48669.1| hypothetical protein SEEE2490_15810 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435167552|gb|ELN53474.1| hypothetical protein SEEE3618_00325 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435177919|gb|ELN63176.1| hypothetical protein SEEE4941_22479 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435189115|gb|ELN73760.1| hypothetical protein SEEECHS4_21192 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435189780|gb|ELN74404.1| hypothetical protein SEEE7927_18173 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435298734|gb|ELO74925.1| hypothetical protein SEEE3944_15734 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435310445|gb|ELO84912.1| hypothetical protein SEEE2651_06163 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435313628|gb|ELO87245.1| hypothetical protein SEEE5646_22608 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435320944|gb|ELO93432.1| hypothetical protein SEEE2625_00205 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435325744|gb|ELO97588.1| hypothetical protein SEEE1976_05647 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435325997|gb|ELO97833.1| hypothetical protein SEEE5621_12234 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|444845336|gb|ELX70546.1| hypothetical protein SEEDSL_020161 [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444848224|gb|ELX73353.1| hypothetical protein SEEG9184_002416 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444850890|gb|ELX75987.1| hypothetical protein SEEDHWS_013524 [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444859149|gb|ELX84103.1| hypothetical protein SEE10_022203 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444864419|gb|ELX89218.1| hypothetical protein SE20037_13385 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444865205|gb|ELX89982.1| hypothetical protein SEE8A_008162 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444873011|gb|ELX97319.1| hypothetical protein SEE13_004892 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444879933|gb|ELY04022.1| hypothetical protein SEE18569_001482 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444885310|gb|ELY09104.1| hypothetical protein SEE23_021295 [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 722
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|348676175|gb|EGZ15993.1| hypothetical protein PHYSODRAFT_354845 [Phytophthora sojae]
Length = 327
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ AA+ GDP A+ LG + VQ +Q +A Y + A A + LG ++LTG
Sbjct: 191 LIKAADAGDPTAKSRLGEYYSLGKGGVQKNQARAVQYYKDAATTGIVTAQFNLGYLFLTG 250
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV-QVPECL 214
D V KD A F +A+EKG A + + G +VP+ L
Sbjct: 251 DGVPKDPLQAEALFRKAAEKGFVMAMVNLAQMYRTGYGKVPKDL 294
>gi|438108356|ref|ZP_20867033.1| hypothetical protein SEEE3407_02301 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435333126|gb|ELP03985.1| hypothetical protein SEEE3407_02301 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
Length = 722
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|348590324|ref|YP_004874786.1| hypothetical protein TASI_1004 [Taylorella asinigenitalis MCE3]
gi|347974228|gb|AEP36763.1| hypothetical protein TASI_1004 [Taylorella asinigenitalis MCE3]
Length = 342
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 117 ANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AN GD Q+ELG V +Y QS Q + EK+ Q AL LG +YL G
Sbjct: 83 ANKGDAHYQFELGYMYFKGEGVTKNYTQSVQ----WYEKSAAQGFVHALNNLGYMYLMGL 138
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V KD A F +AS KG A G + +G V TK +AA +
Sbjct: 139 GVDKDYKKAFENFEKASTKGFPEAIYNLGYMYQKGWGVEPNATKARDLFETAATAGNVSA 198
Query: 233 ESNLM----------NPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
NL +KAK+ +E AA AG L R L + E+
Sbjct: 199 MFNLGLCYQFGRGTDKDAKKAKQWYEKAANAGHVLAQRNLGYLYEK 244
>gi|260555636|ref|ZP_05827856.1| Sel1 repeat family [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|260410547|gb|EEX03845.1| Sel1 repeat family [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|452948342|gb|EME53821.1| hypothetical protein G347_14658 [Acinetobacter baumannii MSP4-16]
Length = 266
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A++ G +AQ +LG Q Q+AF Y + A +Q A Y LG +Y G
Sbjct: 66 LFQKASDQGLAEAQNDLGGMYFEGLGTTQDYQKAFKYFDSAANQKLAAAQYNLGLMYDKG 125
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
++KD AL + ++E+G+A A G+ G VP+ TK AA++
Sbjct: 126 LYIQKDRKKALELYELSTEQGYAKAQYNLGNAYANGDGVPQNNTKALELFSKAAQQNLPQ 185
Query: 232 LESNLMNPV----------EKAKEQFEVAAQAG 254
NL N +KA E F AAQ G
Sbjct: 186 ASYNLGNMYADGEGVTQDNKKALEYFTKAAQQG 218
>gi|168333375|ref|ZP_02691655.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 439
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 12/138 (8%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD AQYELG + DYV+S + +KA +Q H + Y +G YL G
Sbjct: 9 AAEHGDAQAQYELGKYYGSGDGIRKDYVKS----MAWFKKAAEQEHSNSQYEIGIYYLNG 64
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK----LNAKRVSAAKK 227
V K++ A F R++E + G G V + + K +N
Sbjct: 65 KGVTKNLGRAFEWFKRSAENNNQYGEYWLGIFYYGGYHVSKDIKKAIELINRSAQQGYDA 124
Query: 228 ARANLESNLMNPVEKAKE 245
A+ NL S N +KE
Sbjct: 125 AQFNLGSCYANGHGVSKE 142
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 10/154 (6%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A AA ++QYE+G ++ +AF + +++ + + Y LG Y
Sbjct: 40 AWFKKAAEQEHSNSQYEIGIYYLNGKGVTKNLGRAFEWFKRSAENNNQYGEYWLGIFYYG 99
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V KDI A+ +R++++G+ A GS G V + L K AA +
Sbjct: 100 GYHVSKDIKKAIELINRSAQQGYDAAQFNLGSCYANGHGVSKELHKAIWWYKKAADQGHV 159
Query: 231 NLESNLMNP----------VEKAKEQFEVAAQAG 254
+ L N +EKA E ++ +A+ G
Sbjct: 160 RAQYELANSYYNGEGTAKNLEKAVEWYKESAEQG 193
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 34 KKAMELIAKGWSALKEVDRV---IDYCELNDRRLIPLLKTAKENFELALEADNSNTHARY 90
KKA+ELI + SA + D + C N + L A ++ A AD + A+Y
Sbjct: 108 KKAIELINR--SAQQGYDAAQFNLGSCYANGHGVSKELHKAIWWYKKA--ADQGHVRAQY 163
Query: 91 WLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYY 148
L+ + Y+ G K + A+ ++A G +AQY+L ++D+ AF
Sbjct: 164 ELANSY--YNGEGTAKNLEKAVEWYKESAEQGHLEAQYKLARFYSTGEGVEKNDEMAFEL 221
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+K+ Q + A +G Y G V ++ A+ + +A+EKG A A GS RG
Sbjct: 222 YQKSAQQGNLKAQCAIGVCYEEGLGVHIELGKAVEWYKKAAEKGFAEAQYRLGSCFERGK 281
Query: 209 QVPECLTK 216
V + K
Sbjct: 282 GVVKIQNK 289
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF + +KA DQL +L+ Y TG V+KD+ A W + +++E+G G
Sbjct: 326 AFSWYKKAADQLDSTGQWLIALCYKTGSGVEKDLRRAAWWYIKSAEQGDPQGQYGIGVCY 385
Query: 205 LRGVQVPECLTK 216
G V + + K
Sbjct: 386 ANGEGVSKNIDK 397
>gi|421449961|ref|ZP_15899341.1| hypothetical protein SEEE6482_15682 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396068777|gb|EJI77123.1| hypothetical protein SEEE6482_15682 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
Length = 722
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|168234477|ref|ZP_02659535.1| Sel1 repeat family protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194469688|ref|ZP_03075672.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456052|gb|EDX44891.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205331603|gb|EDZ18367.1| Sel1 repeat family protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 722
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL 112
E NDR +P + KE E A + D Y K + + P
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDKELSELYAP--------TD 558
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ + A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y GD
Sbjct: 559 VTNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAYNDGD 614
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
V +D L +A+E G + A + G L L G +P+ L
Sbjct: 615 GVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|436670852|ref|ZP_20517456.1| hypothetical protein SEE30663_04931 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|435013444|gb|ELM04090.1| hypothetical protein SEE30663_04931 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
Length = 705
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 490 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 542
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 543 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 593
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 594 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 639
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 608 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 667
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 668 GDGVEKDLNKA 678
>gi|421884689|ref|ZP_16315898.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379985816|emb|CCF88171.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 536
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL 112
E NDR +P + KE E A + D Y K + + P
Sbjct: 321 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDKELSELYAP--------TD 372
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ + A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y GD
Sbjct: 373 VTNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAYNDGD 428
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARA 230
V +D L +A+E G + A + G L L G +P+ L + K+ + ARA
Sbjct: 429 GVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNARA 488
Query: 231 NLESNLM 237
+ LM
Sbjct: 489 HYNLGLM 495
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 439 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNARAHYNLGLMYRN 498
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 499 GDGVEKDLNKA 509
>gi|153872587|ref|ZP_02001435.1| Sel1-like repeat [Beggiatoa sp. PS]
gi|152070944|gb|EDN68562.1| Sel1-like repeat [Beggiatoa sp. PS]
Length = 154
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL A +G+ +AQY L + V + + A +++ A +Q A + LG +Y+ G
Sbjct: 37 LLSPLAEVGNLEAQYRLAIMAQNGLGMVVNQKMAVGWMQAAAEQGFDLAQHGLGFMYMQG 96
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKR 221
+CV+KD A A+ F A+E+ AGA + G L G V + L + AKR
Sbjct: 97 ECVEKDEAKAVHWFRLAAEQDLAGAQVILGDLYKEGRGVKQDLDE--AKR 144
>gi|375119570|ref|ZP_09764737.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326623837|gb|EGE30182.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
Length = 645
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 430 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 482
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 483 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 533
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 534 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 593
Query: 229 RANLESNL 236
A NL
Sbjct: 594 NAQAHYNL 601
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 548 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 607
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 608 GDGVEKDLNKA 618
>gi|218549781|ref|YP_002383572.1| hypothetical protein EFER_2462 [Escherichia fergusonii ATCC 35469]
gi|218357322|emb|CAQ89959.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 325
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ V S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDSEAQYIVGFYYNRDSA-VDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 67 SLGRKYSEDKSCHKDNEQAIFWLKKAARQGHTFASNALGWILDRG 111
>gi|299531481|ref|ZP_07044887.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298720444|gb|EFI61395.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 542
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A SN A+Y LS L+ + VP + + A L +A G AQ+ELG R N
Sbjct: 145 AQQSNAVAQYNLSHLYQEGLGVPQSF-STAAQWLEKSAAQGHVTAQFELGQRYLKGNGVA 203
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+ A + +KA DQ H A LG++ G VK D A RA+E+G A A +
Sbjct: 204 VNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQNS 263
Query: 200 YGSLLLRGVQVP 211
G + + GV VP
Sbjct: 264 LGRMYMDGVGVP 275
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
QS A + ++A DQ H A Y LGT+Y G ++ +AL + +A+E+GHA A
Sbjct: 312 QSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINN 371
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G+L G V + AA K A+ + NL
Sbjct: 372 VGTLYAEGRGVAQNYATAMQWFRRAADKGDASAQFNL 408
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N R +L L ++ A A AA+ DAQY LG Q
Sbjct: 294 ADGQNHLGRLYLYGLGVE-----QSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQ 348
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ A + +KA +Q H A+ +GT+Y G V ++ A+A+ F RA++KG A A
Sbjct: 349 NYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGDASA 404
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVEND-YVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ GD AQ+ L RL + S QA + A +Q H GA LG +Y G
Sbjct: 396 AADKGDASAQFNL-ARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGA 454
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A+ + RA+E+G A A G + +G V
Sbjct: 455 ARDYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGV 490
>gi|384411623|ref|YP_005620988.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931997|gb|AEH62537.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 202
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA+ GD +A+ LG Q Q+AF++ +KA DQ A Y LG +Y G
Sbjct: 38 LKQAADQGDTEAEAALGEAFDFGKITPQDYQKAFFWYQKAADQAVAEAQYNLGGLYYKGA 97
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
KD A++ + +A+++G+ A L +G VP+
Sbjct: 98 GRPKDGEKAVYWYRKAADQGYIDAQRNLALLYAKGELVPQS 138
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV----DAANMGDPDAQYELGCRLRVEN 136
AD + A+Y L L+ K GA + V AA+ G DAQ L L +
Sbjct: 78 ADQAVAEAQYNLGGLYYK----GAGRPKDGEKAVYWYRKAADQGYIDAQRNLAL-LYAKG 132
Query: 137 DYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ V QSD+QA Y+ +KA DQ + A LG+ Y G + ++ AL+ +A+++G A
Sbjct: 133 ELVPQSDEQAVYWYQKAADQGNAEAQRALGSAYALGKGMPRNKEKALFWIGKAADQGDAE 192
Query: 196 A 196
A
Sbjct: 193 A 193
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%)
Query: 63 RLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDP 122
R P + + K+ +EL AD +T A L + + AA+
Sbjct: 24 RKTPSIFSQKKLYELKQAADQGDTEAEAALGEAFDFGKITPQDYQKAFFWYQKAADQAVA 83
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
+AQY LG + ++A Y+ KA DQ + A L +Y G+ V + A+
Sbjct: 84 EAQYNLGGLYYKGAGRPKDGEKAVYWYRKAADQGYIDAQRNLALLYAKGELVPQSDEQAV 143
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+ + +A+++G+A A A GS G +P
Sbjct: 144 YWYQKAADQGNAEAQRALGSAYALGKGMP 172
>gi|218460230|ref|ZP_03500321.1| putative hemaglutinin protein [Rhizobium etli Kim 5]
Length = 464
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + V DQ QA + + A D+ A Y LG++Y G
Sbjct: 315 LADAAQGGDALALFEIGARYSDGRNGVAVDQKQAATWYQLAADKGFAPAQYRLGSMYEKG 374
Query: 172 DCVKKDIASALWCFHRASEKGHAGA 196
+ V++DIA A + +A+ +G+A A
Sbjct: 375 NGVERDIAKARSFYEQAANQGNASA 399
>gi|168259700|ref|ZP_02681673.1| Sel1 repeat family protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205351033|gb|EDZ37664.1| Sel1 repeat family protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 722
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|83310461|ref|YP_420725.1| TPR repeat-containing SEL1 subfamily protein [Magnetospirillum
magneticum AMB-1]
gi|82945302|dbj|BAE50166.1| TPR repeat SEL1 subfamily [Magnetospirillum magneticum AMB-1]
Length = 393
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
++L L SN HA W +AA GDP AQ+ LG ++
Sbjct: 204 YDLGLGVAQSNAHALKWFR---------------------EAAKQGDPQAQFNLGNMIQQ 242
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
S + A + ++A +Q GA++ LG +Y G V++D A+ + +A+++G A
Sbjct: 243 GRGVESSAEVAAKWFKQAAEQGDAGAIFALGALYEAGTGVERDEIQAVELYRQAADQGLA 302
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD QY LG + QS+ A + +A Q P A + LG + G V+
Sbjct: 188 AAKAGDARGQYSLGVMYDLGLGVAQSNAHALKWFREAAKQGDPQAQFNLGNMIQQGRGVE 247
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
A F +A+E+G AGA A G+L G V
Sbjct: 248 SSAEVAAKWFKQAAEQGDAGAIFALGALYEAGTGV 282
>gi|384250619|gb|EIE24098.1| HCP-like protein [Coccomyxa subellipsoidea C-169]
Length = 764
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DA LG S++ A + ++A + HP Y LG ++L+G V
Sbjct: 295 AAEAGDADAMAHLGHMYANGVGVAASNESALDWFDRAARRNHPSGQYGLGYLHLSGYGVP 354
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG----VQVPECLTKLNAKRVSAAKKARAN 231
KD A F ASE+GH + G + L G + LT N A+ N
Sbjct: 355 KDAKKAFKYFTSASEQGHVESWFHLGVMHLNGWGTKANAQQALTFFNMASKLGHVLAQYN 414
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEE 267
L + Q A + GC L L++I E
Sbjct: 415 LAMLHL--------QGSAADKGGCTAALELLKKIAE 442
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A++G +AQ LG L VQ D +QAF Y +A + A+ LG +Y G V
Sbjct: 262 ADLGSAEAQRALGQML---TQGVQRDPEQAFRYFRQAAEAGDADAMAHLGHMYANGVGVA 318
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
SAL F RA+ + H G L L G VP+ K SA+++
Sbjct: 319 ASNESALDWFDRAARRNHPSGQYGLGYLHLSGYGVPKDAKKAFKYFTSASEQG 371
>gi|114704914|ref|ZP_01437822.1| hypothetical protein FP2506_08256 [Fulvimarina pelagi HTCC2506]
gi|114539699|gb|EAU42819.1| hypothetical protein FP2506_08256 [Fulvimarina pelagi HTCC2506]
Length = 1293
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 95 LHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAV 153
+ L + + + + L+DAA GDP A +ELG RL +E V SD +A + E++
Sbjct: 999 VDLSDQIASLPEGIASVALLDAARSGDPKALFELGLRL-MEGRIVSSDAAKAAEWFERSA 1057
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
A Y LGT+Y G+ V++D A + A++ G+ A L GV
Sbjct: 1058 KLDFAPAQYSLGTLYEKGNGVERDTVKARDWYLNAAKNGNVRAMHNLAVLFATGV 1112
>gi|444708848|gb|ELW49887.1| Protein sel-1 like protein 1 [Tupaia chinensis]
Length = 826
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 79 LEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
L A+ N+HA +L K Y AAN G+ A LG +D
Sbjct: 337 LAANAGNSHAMAFLGKRAFDY-------------FNLAANAGNSHAMAFLGKMYSEGSDT 383
Query: 139 V-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
V QS++ A +Y +KA D +P LG YL G V+ + AL F +A+E+G
Sbjct: 384 VPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQ 443
Query: 198 IAYGSLLLRGVQV 210
+ GS+ G+ V
Sbjct: 444 LQLGSMYYNGIGV 456
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 49 EVDRVIDYCEL-----NDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYH--V 101
+ R DY L N + L K A + F LA A NS HA +L K++ + V
Sbjct: 327 QAQRAFDYFNLAANAGNSHAMAFLGKRAFDYFNLAANAGNS--HAMAFLGKMYSEGSDTV 384
Query: 102 PGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGAL 161
P + + AA+MG+P Q LG + A Y +KA +Q
Sbjct: 385 PQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQ 443
Query: 162 YLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
LG++Y G VK+D AL F+ AS+ GH
Sbjct: 444 LQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 475
>gi|418789454|ref|ZP_13345241.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418794254|ref|ZP_13349976.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418796853|ref|ZP_13352544.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392760695|gb|EJA17530.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392762249|gb|EJA19065.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392770226|gb|EJA26954.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
Length = 722
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|424888734|ref|ZP_18312337.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393174283|gb|EJC74327.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 1257
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + + DQ QA + + + D+ A Y LG++Y G
Sbjct: 978 LADAAQGGDALALFEIGARFSDGRNGIAVDQKQAASWYQLSADKGFAPAEYRLGSMYEKG 1037
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DIA A + +A+ +G+A A A+ Y S
Sbjct: 1038 NGVERDIAKAKGFYEQAANQGNASAMHNLAVLYAS 1072
>gi|404487140|ref|ZP_11022327.1| hypothetical protein HMPREF9448_02788 [Barnesiella intestinihominis
YIT 11860]
gi|404335636|gb|EJZ62105.1| hypothetical protein HMPREF9448_02788 [Barnesiella intestinihominis
YIT 11860]
Length = 1892
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 59 LNDRRLIPLLKTAKENFELALEADNSNTHAR--YWL--SKLHLKYHVPGACKAMGAALLV 114
+ND + A F+ A+E N+N R Y+L K L+ +P + LL
Sbjct: 1322 MNDEETESNERKAVHYFQKAIELGNTNAMFRISYYLHNGKGGLQVDIPREIE-----LLT 1376
Query: 115 DAANMGDPDAQYELGCRLR-VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+A+ G+ A Y LG E+ Q+ + + Y + A D A+ +G +YL G+
Sbjct: 1377 EASKRGNHQATYRLGLLFEDNESGMAQNLELSVKYFQLAADNGILAAINKMGELYLFGEV 1436
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+ ++ A+ CF ASE+G+ A+ G L G+
Sbjct: 1437 IPANLTKAISCFTAASEQGYGKASYWLGRLHTDGI 1471
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AA PDA LG E+ ++AFY+ +KA + H AL LG +Y G
Sbjct: 992 FTKAAEQNMPDAMCNLGDMYSYEDGLTIDYEKAFYWYKKAAETKHSRALTELGDMYYAGK 1051
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
V++D A+ + +A ++G+ A + G + +G
Sbjct: 1052 GVRQDYQKAMEYYQKACDEGYPYAFYSLGFMYWKG 1086
>gi|399116439|emb|CCG19245.1| conserved hypothetical Sel1 repeat protein [Taylorella
asinigenitalis 14/45]
Length = 339
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 68/166 (40%), Gaps = 18/166 (10%)
Query: 117 ANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AN GD Q+ELG V +Y QS Q + EK+ Q AL LG +YL G
Sbjct: 83 ANKGDAHYQFELGYMYFKGEGVTKNYTQSVQ----WYEKSAAQGFVHALNNLGYMYLMGL 138
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V KD A F +AS KG A G L +G V K +AA +
Sbjct: 139 GVDKDYKKAFENFEKASTKGFPEAIYNLGYLYQKGWGVEPNAAKARDLFETAATAGNVSA 198
Query: 233 ESNLM----------NPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
NL +KAKE +E AA AG L R L + E+
Sbjct: 199 MFNLGLCYQYGRGTDKDAKKAKEWYEKAANAGHVLAQRNLGYLYEK 244
>gi|260753302|ref|YP_003226195.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552665|gb|ACV75611.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 202
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA+ GD +A+ LG Q Q+AF++ +KA DQ A Y LG +Y G
Sbjct: 38 LKQAADQGDAEAETALGEAFDFGKITPQDYQKAFFWYQKAADQAVAEAQYNLGGLYYKGA 97
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPEC 213
KD A++ + +A+++G+ A L +G VP+
Sbjct: 98 GRPKDGEKAVYWYRKAADQGYIDAQRNLALLYAKGELVPQS 138
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV----DAANMGDPDAQYELGCRLRVEN 136
AD + A+Y L L+ K GA + V AA+ G DAQ L L +
Sbjct: 78 ADQAVAEAQYNLGGLYYK----GAGRPKDGEKAVYWYRKAADQGYIDAQRNLAL-LYAKG 132
Query: 137 DYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ V QSD+QA Y+ +KA DQ + A LG+ Y G V ++ AL+ +A+++G A
Sbjct: 133 ELVPQSDEQAVYWYQKAADQGNADAQRALGSAYALGKGVPRNKEKALFWIGKAADQGDAE 192
Query: 196 A 196
A
Sbjct: 193 A 193
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%)
Query: 63 RLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDP 122
R P + + K+ +EL AD + A L + + AA+
Sbjct: 24 RKTPSIFSQKKLYELKQAADQGDAEAETALGEAFDFGKITPQDYQKAFFWYQKAADQAVA 83
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
+AQY LG + ++A Y+ KA DQ + A L +Y G+ V + A+
Sbjct: 84 EAQYNLGGLYYKGAGRPKDGEKAVYWYRKAADQGYIDAQRNLALLYAKGELVPQSDEQAV 143
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+ + +A+++G+A A A GS G VP
Sbjct: 144 YWYQKAADQGNADAQRALGSAYALGKGVP 172
>gi|167995240|ref|ZP_02576330.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168245276|ref|ZP_02670208.1| Sel1 repeat family protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194442982|ref|YP_002041269.1| hypothetical protein SNSL254_A2175 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194450004|ref|YP_002046056.1| hypothetical protein SeHA_C2227 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|374981031|ref|ZP_09722361.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|378450675|ref|YP_005238034.1| hypothetical protein STM14_2491 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378699920|ref|YP_005181877.1| hypothetical protein SL1344_1982 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378984569|ref|YP_005247724.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|383496721|ref|YP_005397410.1| hypothetical protein UMN798_2170 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386591828|ref|YP_006088228.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|418809551|ref|ZP_13365103.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418813704|ref|ZP_13369225.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418814971|ref|ZP_13370479.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418822758|ref|ZP_13378169.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418830192|ref|ZP_13385155.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418840652|ref|ZP_13395481.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418844899|ref|ZP_13399685.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418850684|ref|ZP_13405400.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418853808|ref|ZP_13408493.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418858952|ref|ZP_13413561.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418863578|ref|ZP_13418116.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418868239|ref|ZP_13422682.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419730338|ref|ZP_14257284.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419734721|ref|ZP_14261608.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419741122|ref|ZP_14267832.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419742412|ref|ZP_14269086.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419747321|ref|ZP_14273852.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421568932|ref|ZP_16014640.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421574604|ref|ZP_16020225.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421579787|ref|ZP_16025349.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421586404|ref|ZP_16031886.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422026275|ref|ZP_16372671.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422031301|ref|ZP_16377471.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427550683|ref|ZP_18927976.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427566985|ref|ZP_18932690.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427587384|ref|ZP_18937482.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427610877|ref|ZP_18942347.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427634429|ref|ZP_18947239.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427656312|ref|ZP_18952006.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427661459|ref|ZP_18956917.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427669677|ref|ZP_18961716.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427770379|ref|ZP_18966914.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|194401645|gb|ACF61867.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408308|gb|ACF68527.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205327048|gb|EDZ13812.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205335986|gb|EDZ22750.1| Sel1 repeat family protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|267994053|gb|ACY88938.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158568|emb|CBW18079.1| hypothetical exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912997|dbj|BAJ36971.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224651|gb|EFX49714.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|380463542|gb|AFD58945.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381292695|gb|EIC33871.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381294346|gb|EIC35485.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381296874|gb|EIC37974.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381314283|gb|EIC55057.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381319593|gb|EIC60289.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383798872|gb|AFH45954.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392773636|gb|EJA30332.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392774930|gb|EJA31625.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392787015|gb|EJA43563.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392793350|gb|EJA49794.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392802425|gb|EJA58639.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392811142|gb|EJA67154.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392813708|gb|EJA69672.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392818534|gb|EJA74418.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392825948|gb|EJA81682.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392831191|gb|EJA86825.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392833446|gb|EJA89061.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392838145|gb|EJA93709.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|402521262|gb|EJW28600.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402524804|gb|EJW32101.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402528458|gb|EJW35712.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|402528624|gb|EJW35875.1| Sel1 protein-like (TPR repeats) [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|414017902|gb|EKT01591.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414018695|gb|EKT02334.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414020361|gb|EKT03946.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414032463|gb|EKT15468.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414033466|gb|EKT16415.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414036922|gb|EKT19725.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414046847|gb|EKT29157.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414048204|gb|EKT30457.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414052792|gb|EKT34817.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414059452|gb|EKT41029.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414064995|gb|EKT45813.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 722
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|398257627|gb|EJN41232.1| hypothetical protein lvs_L3 [Acanthamoeba polyphaga lentillevirus]
Length = 550
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF Y ++A +Q H A Y + Y TG CV KD A++ A+ +G A I +
Sbjct: 225 AFKYYQQAANQNHSSAQYFVAVFYKTGKCVAKDYKKAVYWLTLAASQGLNSAKIKLAEMY 284
Query: 205 LRGVQVPE 212
+RG+ V +
Sbjct: 285 MRGIHVEQ 292
>gi|351737145|gb|AEQ60180.1| hypothetical protein [Acanthamoeba castellanii mamavirus]
Length = 584
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF Y ++A +Q H A Y + Y TG CV KD A++ A+ +G A I +
Sbjct: 225 AFKYYQQAANQNHSSAQYFVAVFYKTGKCVAKDYKKAVYWLTLAASQGLNSAKIKLAEMY 284
Query: 205 LRGVQVPE 212
+RG+ V +
Sbjct: 285 MRGIHVEQ 292
>gi|168468113|ref|ZP_02701950.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418760694|ref|ZP_13316847.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418764910|ref|ZP_13321003.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418772310|ref|ZP_13328314.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418775527|ref|ZP_13331485.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418778211|ref|ZP_13334124.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418783566|ref|ZP_13339411.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418803491|ref|ZP_13359112.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419789526|ref|ZP_14315206.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419794227|ref|ZP_14319841.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|195628809|gb|EDX48235.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392614970|gb|EIW97410.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392615311|gb|EIW97750.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392732424|gb|EIZ89635.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392741859|gb|EIZ98954.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742246|gb|EIZ99336.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392748600|gb|EJA05586.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392756025|gb|EJA12924.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392756578|gb|EJA13473.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392773020|gb|EJA29717.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 722
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 611 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 670
Query: 229 RANLESNL 236
A NL
Sbjct: 671 NAQAHYNL 678
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|269468898|gb|EEZ80485.1| hypothetical protein Sup05_0100 [uncultured SUP05 cluster
bacterium]
Length = 187
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ AA+ GD AQ L N + +AF + KA +Q HP + +LG +Y +G
Sbjct: 52 FLKAAHGGDKIAQSWLAMMYTFGNGVPLDNTEAFKWFSKAANQGHPSSQDMLGLMYQSGK 111
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++ D + + ++ A+ +GHA A + +G+ V
Sbjct: 112 GIEVDYKKSFYWYNLAANQGHAQAQFNLAEMYAKGLGV 149
>gi|298293031|ref|YP_003694970.1| Sel1 domain-containing protein repeat-containing protein [Starkeya
novella DSM 506]
gi|296929542|gb|ADH90351.1| Sel1 domain protein repeat-containing protein [Starkeya novella DSM
506]
Length = 352
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G A Y LG + A + +KA D+ P ALY L T+Y G+ V
Sbjct: 162 AAENGSSRAAYNLGLTYLQGQVAPKEPAIAAEWFQKAADRDQPDALYALATLYRDGNGVP 221
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A RASE G+ A +G + G+ VP+
Sbjct: 222 RDPIEAARLLQRASELGNPVATTEFGIAVFNGIGVPK 258
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+N ++ A Y L +L+ V A+ A AA+ PDA Y L R N +
Sbjct: 163 AENGSSRAAYNLGLTYLQGQVAPKEPAIAAEWFQKAADRDQPDALYALATLYRDGNGVPR 222
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+A +++A + +P A G G V KD A F A+ G+A A Y
Sbjct: 223 DPIEAARLLQRASELGNPVATTEFGIAVFNGIGVPKDEERAAGLFKEAALAGNAIAQNRY 282
Query: 201 GSLLLRGVQVPE 212
+L G VP+
Sbjct: 283 ARILSAGRGVPK 294
>gi|116250359|ref|YP_766197.1| peptidoglycan binding protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115255007|emb|CAK06081.1| putative peptidoglycan binding protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 1267
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA+ GD A +E+G R + + DQ QA + + A D+ A Y LG++Y G
Sbjct: 988 LADAASGGDALALFEIGARYSDGRNGMTVDQKQAASWYQLAADKGFAPAEYRLGSMYEKG 1047
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DIA A + +A+ +G+A A A+ Y S
Sbjct: 1048 NGVERDIAKAKGFYEQAANQGNASAMHNLAVLYAS 1082
>gi|414169803|ref|ZP_11425536.1| hypothetical protein HMPREF9696_03391 [Afipia clevelandensis ATCC
49720]
gi|410885535|gb|EKS33350.1| hypothetical protein HMPREF9696_03391 [Afipia clevelandensis ATCC
49720]
Length = 1097
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
+++G+ L AAN GDP A +E+G R Q A + E+A A + LG
Sbjct: 860 ESIGSTTLRAAANKGDPGAAFEIGIRYAEGRGVAQDYATAAKWYERASHNGIVPATFRLG 919
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
T+Y G +KKDI +A + A+EKG A A
Sbjct: 920 TLYEKGLGLKKDIDTARRYYLDAAEKGSAKA 950
Score = 38.1 bits (87), Expect = 4.2, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 17/145 (11%)
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+ A ++ PGA + +G Y G V +D A+A + RAS G A G+L +G+
Sbjct: 867 LRAAANKGDPGAAFEIGIRYAEGRGVAQDYATAAKWYERASHNGIVPATFRLGTLYEKGL 926
Query: 209 QVPECLTKLNAKRVSAAKKARANLESNL---------MNPVEKAKEQ-FEVAAQAGC--- 255
+ + + + AA+K A NL P K+ Q F AA+ G
Sbjct: 927 GLKKDIDTARRYYLDAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWFRKAAERGIADS 986
Query: 256 --NLGLRWLQRIEEEEKRLLTESSR 278
NLG+ + + I E+ L ES +
Sbjct: 987 QFNLGILYARGIGVEQN--LAESYK 1009
>gi|418826481|ref|ZP_13381702.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392806327|gb|EJA62429.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
Length = 677
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 462 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 514
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 515 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 565
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 566 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 625
Query: 229 RANLESNL 236
A NL
Sbjct: 626 NAQAHYNL 633
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 580 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 639
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 640 GDGVEKDLNKA 650
>gi|417340969|ref|ZP_12122164.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|357958475|gb|EHJ83076.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 657
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 442 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 494
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 495 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 545
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 546 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 605
Query: 229 RANLESNL 236
A NL
Sbjct: 606 NAQAHYNL 613
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 560 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 619
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 620 GDGVEKDLNKA 630
>gi|167552760|ref|ZP_02346511.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205322625|gb|EDZ10464.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 722
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GDCV+KD+ A
Sbjct: 685 GDCVEKDLNKA 695
>gi|224583496|ref|YP_002637294.1| TPR repeat protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224468023|gb|ACN45853.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 722
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|417327136|ref|ZP_12112625.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|353571289|gb|EHC35295.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
Length = 639
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 424 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 476
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 477 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 527
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 528 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 587
Query: 229 RANLESNL 236
A NL
Sbjct: 588 NAQAHYNL 595
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 542 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 601
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 602 GDGVEKDLNKA 612
>gi|144899880|emb|CAM76744.1| TPR repeat protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 536
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 96 HLKYHVPGACKAMGAA--LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAV 153
H+ H G K + A LL +AA+ GD AQ LG N + +A +A
Sbjct: 59 HMLLHGNGITKDVAQAVKLLTEAADKGDALAQNTLGGLYFHGNGVPRDPARALILFSRAA 118
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
DQ P AL LG +Y G+ V K+ A A+ H++++ G + + G G VP
Sbjct: 119 DQNQPNALNNLGQLYFQGNGVAKNEAKAVEYLHKSADMGISASWETLGIAYWHGRGVP 176
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDY 138
AD + A+ L L+ +H G + AL++ AA+ P+A LG N
Sbjct: 82 ADKGDALAQNTLGGLY--FHGNGVPRDPARALILFSRAADQNQPNALNNLGQLYFQGNGV 139
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+++ +A Y+ K+ D + LG Y G V D A AL +A+E+GH A
Sbjct: 140 AKNEAKAVEYLHKSADMGISASWETLGIAYWHGRGVPADKAVALPWLKKAAERGHLVAQN 199
Query: 199 AYGSLLLRG 207
YG+ L G
Sbjct: 200 LYGAALWTG 208
>gi|290982386|ref|XP_002673911.1| predicted protein [Naegleria gruberi]
gi|284087498|gb|EFC41167.1| predicted protein [Naegleria gruberi]
Length = 360
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 62 RRLIPL---LKTAKENFELALE-ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVD 115
R L PL +K ++FE L+ A+ + A+Y + K + K G K A +
Sbjct: 105 RNLPPLYYKMKDYSKSFEWYLKLAEKGDAKAQYSIGKAYKK--GEGIEKDYSKAFEWFLK 162
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+A +G+ DAQ+ +G + +E D V+S + + KA + + A Y G
Sbjct: 163 SAEIGNADAQFNVGNAYKKGEGIEKDIVKS----YEWFLKAAENGNRLAQCCTAKRYFIG 218
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKAR 229
+ V+KD + A F +A+E G A GS+ G + + ++K V AA+K +
Sbjct: 219 EGVEKDSSKAFEWFLKAAENGETEAQFTVGSMFYNGEGIEKDISKAFEWYVKAAEKGQ 276
>gi|417540095|ref|ZP_12192217.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353663285|gb|EHD02022.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 621
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 406 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 458
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 459 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 509
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 510 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 569
Query: 229 RANLESNL 236
A NL
Sbjct: 570 NAQAHYNL 577
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 524 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 583
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 584 GDGVEKDLNKA 594
>gi|291613675|ref|YP_003523832.1| Sel1 domain protein repeat-containing protein [Sideroxydans
lithotrophicus ES-1]
gi|291583787|gb|ADE11445.1| Sel1 domain protein repeat-containing protein [Sideroxydans
lithotrophicus ES-1]
Length = 317
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
+A+ A + AA GD DAQ LG + QA+ + +A + A LG
Sbjct: 217 EAVAAQWYLKAAKKGDLDAQDNLGLMYIRGQGVARDTAQAYKWFSRAAEHGFANAQRNLG 276
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAK 220
+Y TGD VK+D+ A++ + +A+++GH V+ E L KL K
Sbjct: 277 VMYGTGDGVKQDMKKAVYWYRKAADQGH--------------VEAQEILAKLKQK 317
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG V+ D QA + KA + + L LG +Y G VK
Sbjct: 119 AAEQGFSIAQQNLGAMYANGRGVVKDDVQAVQWYRKAAESNNANGLQNLGWMYANGLGVK 178
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A+ + +A++ GHAGA G + G V + + AAKK + + N
Sbjct: 179 RDDAHAVVLYRKAAKLGHAGAQNCLGVMYASGRGVAKDEAVAAQWYLKAAKKGDLDAQDN 238
Query: 236 L 236
L
Sbjct: 239 L 239
>gi|399115780|emb|CCG18583.1| conserved hypothetical Sel1 repeat protein [Taylorella
equigenitalis 14/56]
Length = 341
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ + D AN GD Q+ELG + Q+ A + EK+ Q A+ LG +Y+
Sbjct: 83 STIEDRANKGDAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMM 142
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V K+ + A+ + +A+ K A G + +G V L K N AA K
Sbjct: 143 GYGVDKNYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNHT 202
Query: 231 NLESNL 236
+ NL
Sbjct: 203 EAQYNL 208
>gi|397661938|ref|YP_006502638.1| putative Sel1 repeat protein [Taylorella equigenitalis ATCC 35865]
gi|394350117|gb|AFN36031.1| putative Sel1 repeat protein [Taylorella equigenitalis ATCC 35865]
Length = 341
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ + D AN GD Q+ELG + Q+ A + EK+ Q A+ LG +Y+
Sbjct: 83 STIEDRANKGDAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMM 142
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V K+ + A+ + +A+ K A G + +G V L K N AA K
Sbjct: 143 GYGVDKNYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNHT 202
Query: 231 NLESNL----------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
+ NL +KA E ++ AA+A L R L + E+
Sbjct: 203 EAQYNLGIHYQFGKGVTKDDKKAMEWYKKAAEADHYLAQRNLAYLYEK 250
>gi|375001807|ref|ZP_09726147.1| MORN repeat variant [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353076495|gb|EHB42255.1| MORN repeat variant [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
Length = 645
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 430 EFNDRTGKILSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 482
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 483 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 533
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 534 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 593
Query: 229 RANLESNL 236
A NL
Sbjct: 594 NAQAHYNL 601
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 548 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 607
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 608 GDGVEKDLNKA 618
>gi|254450065|ref|ZP_05063502.1| Sel1 domain protein repeat-containing protein [Octadecabacter
arcticus 238]
gi|198264471|gb|EDY88741.1| Sel1 domain protein repeat-containing protein [Octadecabacter
arcticus 238]
Length = 234
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ +LG + + +Q + +A + A +Q H A LG +Y +G V +
Sbjct: 48 AEQGDAKAQTQLGDMYFIGDGMIQDNSEAANWYRLAAEQGHANAQAYLGYMYFSGTGVTQ 107
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV----SAAKKARANL 232
D A A + A+E+G A A G++ G + + K NA+ V +AA++ AN
Sbjct: 108 DYAEAANWYRLAAEQGIAPAQTHLGNMYSNG----DGVIKDNAEAVDWYRNAAEQGNANA 163
Query: 233 ESNL 236
+ NL
Sbjct: 164 QFNL 167
>gi|417517607|ref|ZP_12180156.1| Tetratricopeptide repeat family protein, partial [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|353651306|gb|EHC93442.1| Tetratricopeptide repeat family protein, partial [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
Length = 638
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 423 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 475
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 476 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 526
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 527 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 586
Query: 229 RANLESNL 236
A NL
Sbjct: 587 NAQAHYNL 594
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 541 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 600
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 601 GDGVEKDLNKA 611
>gi|319779711|ref|YP_004130624.1| hypothetical protein TEQUI_1569 [Taylorella equigenitalis MCE9]
gi|317109735|gb|ADU92481.1| hypothetical protein TEQUI_1569 [Taylorella equigenitalis MCE9]
Length = 341
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ + D AN GD Q+ELG + Q+ A + EK+ Q A+ LG +Y+
Sbjct: 83 STIEDRANKGDAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMM 142
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V K+ + A+ + +A+ K A G + +G V L K N AA K
Sbjct: 143 GYGVDKNYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNHT 202
Query: 231 NLESNL----------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
+ NL +KA E ++ AA+A L R L + E+
Sbjct: 203 EAQYNLGIHYKFGKGVTKDDKKAMEWYKKAAEADHYLAQRNLAYLYEK 250
>gi|223935384|ref|ZP_03627301.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
gi|223895794|gb|EEF62238.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
Length = 693
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AAN GD AQY+LG ++ +A + KA +Q P A YL+G Y GD
Sbjct: 107 LMTAANRGDRVAQYKLGTAYDRGFGVPTNNVEALRWYRKAAEQSLPEAQYLVGRAYAFGD 166
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ KD A+++ + +A ++ + A G + G+ V
Sbjct: 167 GIAKDQAASIGWYQKAVDQNYVPAMHNLGMAYVAGLGV 204
>gi|418529155|ref|ZP_13095095.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371453581|gb|EHN66593.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 542
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
QS A + ++A DQ H A Y LGT+Y G ++ +AL + +A+E+GHA A
Sbjct: 312 QSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINN 371
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G+L G V + AA K A+ + NL
Sbjct: 372 VGTLYAEGRGVAQNYATAMQWFRRAADKGDASAQFNL 408
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N R +L L ++ A A AA+ DAQY LG Q
Sbjct: 294 ADGQNHLGRLYLYGLGVE-----QSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQ 348
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ A + +KA +Q H A+ +GT+Y G V ++ A+A+ F RA++KG A A
Sbjct: 349 NYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGDASA 404
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A +N A+Y LS L+ + VP + + A L +A G AQ+ELG R N
Sbjct: 145 AQQNNAVAQYNLSHLYQEGLGVPQSF-STAAQWLEKSAAQGHVTAQFELGQRYIKGNGVA 203
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+ A + +KA DQ H A LG++ G VK D A RA+E+G A A +
Sbjct: 204 VNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQNS 263
Query: 200 YGSLLLRGVQVP 211
G + + GV VP
Sbjct: 264 LGRMYMDGVGVP 275
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVEND-YVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ GD AQ+ L RL + S QA + A +Q H GA LG +Y G
Sbjct: 396 AADKGDASAQFNL-ARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGA 454
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A+ + RA+E+G A A G + +G V
Sbjct: 455 ARDYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGV 490
>gi|417334548|ref|ZP_12117717.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
gi|353574669|gb|EHC37635.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
Length = 639
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 424 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 476
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 477 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 527
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 528 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 587
Query: 229 RANLESNL 236
A NL
Sbjct: 588 NAQAHYNL 595
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 542 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 601
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 602 GDGVEKDLNKA 612
>gi|328542522|ref|YP_004302631.1| Sel1-like repeat protein [Polymorphum gilvum SL003B-26A1]
gi|326412268|gb|ADZ69331.1| Sel1 repeat family [Polymorphum gilvum SL003B-26A1]
Length = 366
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
K A + FE+A AD N A Y L+ L+ + +A A LL AA++GD +AQY L
Sbjct: 165 KKAADLFEIA--ADAGNPSAMYNLAILYQEGEGRPYNEAEAAKLLERAADLGDTEAQYSL 222
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + N ++ + +++ +A + H A G + G V+ D A A F RA
Sbjct: 223 GLQYLEGNATIRDPARGAFWLGRAARRGHVSAQVYYGILRFQGKGVEPDEAEAADWFERA 282
Query: 189 SEKGH 193
+ G+
Sbjct: 283 AAAGN 287
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%)
Query: 83 NSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD 142
+ A + L++L+L K A L AA+ G+P A Y L + ++
Sbjct: 141 TGDPGAAFRLAQLYLLGQGVERDKKKAADLFEIAADAGNPSAMYNLAILYQEGEGRPYNE 200
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
+A +E+A D A Y LG YL G+ +D A + RA+ +GH A + YG
Sbjct: 201 AEAAKLLERAADLGDTEAQYSLGLQYLEGNATIRDPARGAFWLGRAARRGHVSAQVYYGI 260
Query: 203 LLLRGVQV 210
L +G V
Sbjct: 261 LRFQGKGV 268
>gi|161613388|ref|YP_001587353.1| hypothetical protein SPAB_01101 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161362752|gb|ABX66520.1| hypothetical protein SPAB_01101 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 722
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 611 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 670
Query: 229 RANLESNL 236
A NL
Sbjct: 671 NAQAHYNL 678
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|54294242|ref|YP_126657.1| hypothetical protein lpl1307 [Legionella pneumophila str. Lens]
gi|53754074|emb|CAH15547.1| hypothetical protein lpl1307 [Legionella pneumophila str. Lens]
Length = 376
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD +Y LG + + +D +A FY+ +A + H A L YL G V
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
D A + + A+EKG A G LLL G V + + +A +
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQG------ 299
Query: 235 NLMNPVEKAKEQFEVAAQAGCNLGL----RWLQ-----RIEEEEKRL------LTESSRI 279
NPV +AK + A G N L WL+ + EE K+L L E ++
Sbjct: 300 ---NPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSLEVKLAEPEKL 356
Query: 280 E 280
E
Sbjct: 357 E 357
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+P AQ +G + SD +AF + +KA +Q + A LG Y+ G
Sbjct: 114 AAEQGNPIAQRNIGLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTP 173
Query: 176 KDIASALWCFHRASEKG 192
KD+ A + +A+E+G
Sbjct: 174 KDVKKAFEWYQKAAEQG 190
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ D AQ LG Q +AF + KA +Q +P A +G +Y TGD V
Sbjct: 78 AADKNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVT 137
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A F +A+E+G++ A + G + G P+ + K
Sbjct: 138 ASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRL----RVEN 136
A++ + +A+ +L+ +LK + A A AA G P+AQ +LG L V+
Sbjct: 224 ANHGHVNAQTYLAYYYLKGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDK 283
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
DY QQA Y+ K+ Q +P LG +YL G V K + A A+E
Sbjct: 284 DY----QQAAYWFGKSAHQGNPVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAE 333
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA G+ +A Y LG + + ++A + +KA D+ A LG +Y TG
Sbjct: 39 LMQAAKDGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAADKNDALAQLSLGFMYDTGK 98
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP----ECLTKLNAKRVSAAKKA 228
V +D A A + +A+E+G+ A G + G V + T KA
Sbjct: 99 GVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVTASDDKAFTWFKKAAEQGYSKA 158
Query: 229 RANLESNLM------NPVEKAKEQFEVAAQAGCNLG 258
+ NL M V+KA E ++ AA+ G G
Sbjct: 159 QVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG 194
>gi|299530229|ref|ZP_07043655.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298721886|gb|EFI62817.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 418
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG- 171
+V+AA GD AQYELG ++ A ++ A + H + YLLG VY+ G
Sbjct: 1 MVNAAKTGDVAAQYELGKAHLYGKGVEKNADDALRWLHLAAEHNHAPSQYLLGLVYVLGA 60
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ VKKD + L H+A+ G+ A G++ L+G V
Sbjct: 61 EGVKKDPEAGLTHIHQAANAGNLDAQNLLGTIYLKGEAV 99
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 39/81 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQY LG +S QA + A +Q A Y LGT+Y G VK
Sbjct: 331 AANQGYAKAQYNLGTLYENGEGVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVK 390
Query: 176 KDIASALWCFHRASEKGHAGA 196
K+ A RA+E+GHA A
Sbjct: 391 KNAKQAREWLQRAAEQGHAPA 411
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A + A+Y L K HL + G K AL L AA +QY LG + +
Sbjct: 5 AKTGDVAAQYELGKAHL--YGKGVEKNADDALRWLHLAAEHNHAPSQYLLGLVYVLGAEG 62
Query: 139 VQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
V+ D +A +I +A + + A LLGT+YL G+ V+KD A+ + RA+++G A A
Sbjct: 63 VKKDPEAGLTHIHQAANAGNLDAQNLLGTIYLKGEAVEKDAATGVAWLERAAQQGSATAQ 122
Query: 198 IAYGSLLLRG 207
+ G + +G
Sbjct: 123 NSLGFVYRKG 132
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+++A G+ AQY +G + + Q + +A + A +Q + A Y LGT+Y G+
Sbjct: 292 LNSALKGNVLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGE 351
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV-------QVPECLTKLNAKRVSAA 225
V K +A AL + A+E+ A A A G+L G+ Q E L + + + A
Sbjct: 352 GVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNAKQAREWLQRAAEQGHAPA 411
Query: 226 KKARANL 232
KKA A L
Sbjct: 412 KKALAQL 418
>gi|420479516|ref|ZP_14978164.1| cysteine-rich protein X [Helicobacter pylori Hp H-34]
gi|393094633|gb|EJB95240.1| cysteine-rich protein X [Helicobacter pylori Hp H-34]
Length = 256
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD PG LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDIPGGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVPECLTK 216
A I G + + G VP K
Sbjct: 134 TNAYINLGIMYMEGRGVPSNYAK 156
>gi|242280592|ref|YP_002992721.1| Sel1 domain-containing protein repeat-containing protein
[Desulfovibrio salexigens DSM 2638]
gi|242123486|gb|ACS81182.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
salexigens DSM 2638]
Length = 417
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQY LG Q QA ++ KA +Q + A LG++Y G V+
Sbjct: 161 AAEQGLPIAQYNLGIMYAHGMGIDQDFNQAVHWYRKAAEQDNVMAQNNLGSMYNNGKGVE 220
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D + A + + RA+E+G AGA + G L G+ + + + + AA++ + +
Sbjct: 221 QDYSIAAYWYRRAAEQGFAGAQLNLGRLYENGLGLAQDYAQASQWYTKAAEQGLPKAQHD 280
Query: 236 L 236
L
Sbjct: 281 L 281
>gi|237748893|ref|ZP_04579373.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229380255|gb|EEO30346.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 223
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFY-YIEKAVDQLHPGALYLLGTVYLTG 171
L+ A GD DAQY LG R+ ++ + D QA + +A ++ GA Y LG +Y G
Sbjct: 56 LLSLAENGDQDAQYNLG-RIYLQGKGTRQDYQAARKWFMRAAEKEDAGAQYNLGNIYQKG 114
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+++D A + + +A+ K +A A A G L G V +
Sbjct: 115 QGIQQDCKKAFFWYKKAAAKFYAPAQYALGKLYSSGCGVNQ 155
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDAANMGDPDAQYELGCRLRVENDY 138
A+N + A+Y L +++L+ G + AA + AA D AQY LG +
Sbjct: 60 AENGDQDAQYNLGRIYLQ--GKGTRQDYQAARKWFMRAAEKEDAGAQYNLGNIYQKGQGI 117
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG--HAGA 196
Q ++AF++ +KA + + A Y LG +Y +G V ++ + +A+ G A
Sbjct: 118 QQDCKKAFFWYKKAAAKFYAPAQYALGKLYSSGCGVNQNSYKSTEWILKAAYNGMPEAQF 177
Query: 197 AIAYGSLLLRGVQV 210
I Y L G+QV
Sbjct: 178 QIGYRYLTGYGIQV 191
>gi|148262856|ref|YP_001229562.1| Sel1 domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396356|gb|ABQ24989.1| Sel1 domain protein repeat-containing protein [Geobacter
uraniireducens Rf4]
Length = 393
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG + D ++A + KA +Q H A Y L +Y GD VK
Sbjct: 81 AAEQGLAKAQFALGLMYALGEDVAADKKEAARWYRKAAEQGHAAAQYNLAQMYARGDGVK 140
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
KD A + +A+E+G+A A + L +G V +
Sbjct: 141 KDETEADKWYRKAAEQGNAAAQLNLAQLYEKGAGVVQ 177
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ N A+ L++L+ K K A + AA G+ AQ+ + + Q
Sbjct: 154 AEQGNAAAQLNLAQLYEKGAGVVQDKKEAARWYLKAAEQGNVRAQFSIAMMYDKGDGVEQ 213
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+ ++A + +A +Q H A + +G +Y GD V +D A+ + +A+E+G + A
Sbjct: 214 NKKEAARWFRRAAEQNHAKAQFKIGFLYDKGDGVLQDKKEAVKWYRKAAERGVSEARFNL 273
Query: 201 GSLLLRGVQVPE 212
G + G VP+
Sbjct: 274 GLMYYAGSGVPQ 285
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +A++ LG + Q + A + KA DQ A + LG +Y GD +K
Sbjct: 261 AAERGVSEARFNLGLMYYAGSGVPQDKKAAARWFRKAADQGDVDAQFNLGHMYDQGDGIK 320
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +A+E+G A G + G V +
Sbjct: 321 QDRKEAVKWYRKAAEQGFDQAQFNLGLMYFHGYGVKQ 357
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 81 ADNSNTHARYWLSKLHLKYH----VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
A+ + AR+ L L Y+ VP KA A AA+ GD DAQ+ LG +
Sbjct: 262 AERGVSEARF---NLGLMYYAGSGVPQDKKA-AARWFRKAADQGDVDAQFNLGHMYDQGD 317
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
Q ++A + KA +Q A + LG +Y G VK++ A F +A+E+G
Sbjct: 318 GIKQDRKEAVKWYRKAAEQGFDQAQFNLGLMYFHGYGVKQNRKEAFKWFVKAAEQG 373
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
++ ++A + KA +Q A + LG +Y G+ V D A + +A+E+GHA A
Sbjct: 69 RNSREAMKWYRKAAEQGLAKAQFALGLMYALGEDVAADKKEAARWYRKAAEQGHAAAQYN 128
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKA 243
+ RG V + T+ + AA++ A + NL EK
Sbjct: 129 LAQMYARGDGVKKDETEADKWYRKAAEQGNAAAQLNLAQLYEKG 172
>gi|420429158|ref|ZP_14928191.1| cysteine-rich protein X [Helicobacter pylori Hp A-17]
gi|393044488|gb|EJB45480.1| cysteine-rich protein X [Helicobacter pylori Hp A-17]
Length = 256
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
++A Y +KAVD PG LG +Y G V KD A+ F A+EKG+ A I G
Sbjct: 83 KKAVEYFQKAVDNDIPGGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGYTNAYINLGI 142
Query: 203 LLLRGVQVP-------ECLTK 216
+ + G VP EC K
Sbjct: 143 MYMEGRGVPSNYAKATECFRK 163
>gi|378445443|ref|YP_005233075.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|379701229|ref|YP_005242957.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|261247222|emb|CBG25046.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|323130328|gb|ADX17758.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
Length = 645
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 430 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 482
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 483 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 533
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 534 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 593
Query: 229 RANLESNL 236
A NL
Sbjct: 594 NAQAHYNL 601
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 548 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 607
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 608 GDGVEKDLNKA 618
>gi|197262744|ref|ZP_03162818.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197240999|gb|EDY23619.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
Length = 722
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 559
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 560 -----TNKAKQGDSTAQYHLG---KYEFECTNYDV-AMKWLTQSAEQNHPGALLFLAYAY 610
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 611 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 656
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 625 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 684
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 685 GDGVEKDLNKA 695
>gi|264676919|ref|YP_003276825.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262207431|gb|ACY31529.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 542
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
QS A + ++A DQ H A Y LGT+Y G ++ +AL + +A+E+GHA A
Sbjct: 312 QSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINN 371
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G+L G V + AA K A+ + NL
Sbjct: 372 VGTLYAEGRGVAQNYATAMQWFRRAADKGDASAQFNL 408
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 116 AANMGDPDAQYELGCRLRVEND-YVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ GD AQ+ L RL + S QA + A +Q H GA LG +Y G
Sbjct: 396 AADKGDASAQFNL-ARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGA 454
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+D A+ + RA+E+G A A G + +G VP
Sbjct: 455 ARDYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVP 491
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N R +L L ++ A A AA+ DAQY LG Q
Sbjct: 294 ADGQNHLGRLYLYGLGVE-----QSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQ 348
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ A + +KA +Q H A+ +GT+Y G V ++ A+A+ F RA++KG A A
Sbjct: 349 NYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGDASA 404
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 81 ADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A +N A+Y LS L+ + VP + + A L +A G AQ+ELG R N
Sbjct: 145 AQQNNAVAQYNLSHLYQEGLGVPQSF-STAAQWLEKSAAQGHVTAQFELGQRYLKGNGVA 203
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+ A + +KA DQ H A LG++ G VK D A RA+E+G A A +
Sbjct: 204 VNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQNS 263
Query: 200 YGSLLLRGVQVP 211
G + + GV VP
Sbjct: 264 LGRMYMDGVGVP 275
>gi|303287186|ref|XP_003062882.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455518|gb|EEH52821.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G P A +ELG L + + S ++AFY+ KA D A++++G Y +G VKKD
Sbjct: 54 GAPRALFELGEDL-IGKETKVSFRKAFYWYRKAADLGDADAMWMIGVCYRSGLGVKKDKT 112
Query: 180 SA--------LWCFHR 187
A LWCFHR
Sbjct: 113 KAFEWWEKASLWCFHR 128
>gi|68249921|ref|YP_249033.1| hypothetical protein NTHI1569 [Haemophilus influenzae 86-028NP]
gi|68058120|gb|AAX88373.1| hypothetical protein NTHI1569 [Haemophilus influenzae 86-028NP]
Length = 184
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A G AQ+ LG Q D +A + KA +Q + A + LG +Y G
Sbjct: 51 LWLPMAEQGYAKAQFNLGVMYAKGQGVKQDDFEAVKWFRKAAEQGYAEAKFNLGHMYSKG 110
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL---RGVQVPECLTK 216
VK+D A+ + +A+E+G A A G L L RGVQV + L K
Sbjct: 111 RGVKQDDFEAVNWYRKAAEQGDADAQAILGFLYLLGERGVQVNKSLAK 158
>gi|402305749|ref|ZP_10824808.1| Sel1 repeat protein [Haemophilus sputorum HK 2154]
gi|400376862|gb|EJP29749.1| Sel1 repeat protein [Haemophilus sputorum HK 2154]
Length = 383
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LLV AA AQY L + Y ++++ A +++E+A + P ALY LG Y G
Sbjct: 206 LLVKAAKKEYGYAQYLLAMNFF--DLYSENNKGALFWLERAANNDEPEALYQLGVYYEEG 263
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V+ D+A A+ F RA+E H+ AA+ + G+ V +
Sbjct: 264 --VEADLAKAINYFQRAAELNHSDAALELSYIYDEGIIVEQ 302
>gi|338972860|ref|ZP_08628231.1| hypothetical protein CSIRO_1303 [Bradyrhizobiaceae bacterium SG-6C]
gi|338234021|gb|EGP09140.1| hypothetical protein CSIRO_1303 [Bradyrhizobiaceae bacterium SG-6C]
Length = 1089
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
+++G+ L AAN GDP A +E+G R Q A + E+A A + LG
Sbjct: 852 ESIGSTTLRAAANKGDPGAAFEIGIRYAEGRGVAQDYATAAKWYERASHNGIVPATFRLG 911
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
T+Y G +KKDI +A + A+EKG A A
Sbjct: 912 TLYEKGLGLKKDIDAARRYYLDAAEKGSAKA 942
Score = 37.7 bits (86), Expect = 4.9, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 17/145 (11%)
Query: 149 IEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+ A ++ PGA + +G Y G V +D A+A + RAS G A G+L +G+
Sbjct: 859 LRAAANKGDPGAAFEIGIRYAEGRGVAQDYATAAKWYERASHNGIVPATFRLGTLYEKGL 918
Query: 209 QVPECLTKLNAKRVSAAKKARANLESNL---------MNPVEKAKEQ-FEVAAQAGC--- 255
+ + + + AA+K A NL P K+ Q F AA+ G
Sbjct: 919 GLKKDIDAARRYYLDAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWFRKAAERGIADS 978
Query: 256 --NLGLRWLQRIEEEEKRLLTESSR 278
NLG+ + + I E+ L ES +
Sbjct: 979 QFNLGILYARGIGVEQN--LAESYK 1001
>gi|388456660|ref|ZP_10138955.1| Sel1 repeat protein [Fluoribacter dumoffii Tex-KL]
Length = 378
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 62 RRLIPLLKTA----KENFELALEADNSNTHARYWLSKLHLKYHV---PGACKAMGAALL- 113
+R I L+ A KEN + A E + Y ++++L Y G K + AL
Sbjct: 123 QRNIGLMYVAGDGVKENKKTAFEWFEKSAKQGYSKAQVNLAYDYIMGEGTSKDVNQALYW 182
Query: 114 -VDAANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA+ GD AQY LG + V Q D+ AFY+ +A +Q H A L YL G
Sbjct: 183 YQKAADQGDVRAQYSLGLLYTGQQPGVAQDDKLAFYWFSQAANQGHVKAETYLAYYYLKG 242
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
V+ + A + + A+ G + A G LLL G V
Sbjct: 243 YGVEANPEKAAYWYQAAALSGQSEAQAEIGQLLLTGNGV 281
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ +A G+P+A Y +G + ++ +A + +K+ D+ +P A LG +Y G
Sbjct: 39 LMKSAREGNPEAMYLIGRMFQYGEGVTKNYTEAINWYQKSADKNNPLAQLSLGFMYDLGK 98
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
VK++ A + +++++G+A A G + + G V E
Sbjct: 99 GVKQNFPEAFKWYMKSAKQGNAIAQRNIGLMYVAGDGVKE 138
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 81 ADNSNTHARYWLSKLH-----LKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE 135
AD +N A+ L ++ +K + P A K + +A G+ AQ +G + V
Sbjct: 79 ADKNNPLAQLSLGFMYDLGKGVKQNFPEAFK-----WYMKSAKQGNAIAQRNIGL-MYVA 132
Query: 136 NDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
D V+ +++ AF + EK+ Q + A L Y+ G+ KD+ AL+ + +A+++G
Sbjct: 133 GDGVKENKKTAFEWFEKSAKQGYSKAQVNLAYDYIMGEGTSKDVNQALYWYQKAADQGDV 192
Query: 195 GAAIAYGSLLLRGVQ 209
A + G LL G Q
Sbjct: 193 RAQYSLG-LLYTGQQ 206
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + A +L+ +LK + A A AA G +AQ E+G L N +
Sbjct: 224 ANQGHVKAETYLAYYYLKGYGVEANPEKAAYWYQAAALSGQSEAQAEIGQLLLTGNGVDK 283
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
+QA Y+ K+ Q +P LG +YL G V+KD A F A++
Sbjct: 284 DYEQAAYWFTKSAAQGNPIGQGKLGYMYLAGLGVEKDWVKAYALFKIAAQ 333
>gi|190890254|ref|YP_001976796.1| hemaglutinin protein [Rhizobium etli CIAT 652]
gi|190695533|gb|ACE89618.1| putative hemaglutinin protein [Rhizobium etli CIAT 652]
Length = 1253
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + + DQ QA + + A D+ A Y LG++Y G
Sbjct: 974 LADAAQGGDALALFEIGARYSDGRNGMTVDQKQAANWYQLAADKGFAPAQYRLGSMYEKG 1033
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DIA A + +A+ +G+A A A+ Y S
Sbjct: 1034 NGVERDIAKAKTFYEQAANQGNASAMHNLAVLYAS 1068
>gi|62180581|ref|YP_216998.1| hypothetical protein SC2011 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|375114907|ref|ZP_09760077.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|62128214|gb|AAX65917.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322715053|gb|EFZ06624.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 645
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 430 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 482
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 483 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 533
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 534 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 593
Query: 229 RANLESNL 236
A NL
Sbjct: 594 NAQAHYNL 601
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 548 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 607
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 608 GDGVEKDLNKA 618
>gi|315453384|ref|YP_004073654.1| Sel1-like repeat-containing protein [Helicobacter felis ATCC 49179]
gi|315132436|emb|CBY83064.1| Sel1-like repeat protein [Helicobacter felis ATCC 49179]
Length = 560
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 14/125 (11%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHV-----PGACKAMGAALLVDAANMGDPDAQYELG 129
FE A DN N L L YH+ A +A A AA +G Y +G
Sbjct: 429 FEEAANMDNINA-----LHHLGSLYHMGKEVEKDASRAF--AYFYRAAQLGSIKDDYNVG 481
Query: 130 CRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
+ + D V+ D QQA + +KA D A+Y +G +Y G+ + D+ A+ CF RA
Sbjct: 482 V-MYSQGDGVEKDMQQALLHFQKASDGGSSNAMYNMGVIYYQGEGIDHDLQKAMECFKRA 540
Query: 189 SEKGH 193
++ G+
Sbjct: 541 AKFGN 545
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AA +GD A Y LG + QA +Y E+A + + AL+ LG++Y G V
Sbjct: 395 EAAKLGDDKAYYNLGVMCEHGRGTPKDIPQAIFYFEEAANMDNINALHHLGSLYHMGKEV 454
Query: 175 KKDIASALWCFHRASEKG 192
+KD + A F+RA++ G
Sbjct: 455 EKDASRAFAYFYRAAQLG 472
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN+GD LG + + Q+A Y + A AL +G +Y TG+ V
Sbjct: 90 AANLGDSQGFVNLGVMYNLGKGVKKDYQKALDYFKHAASLDDVNALNYMGLMYRTGNGVG 149
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
D A AL + +A+++G A ++ GS+ G + + K AA A N
Sbjct: 150 VDYAKALEFYQQAADRGSVKALVSLGSMHYAGQGMAKDFAKALDYFQQAADLGDARASYN 209
Query: 236 LMNPVE----------KAKEQFEVAAQAG 254
L E K+ E F+ +AQAG
Sbjct: 210 LAVMYENGEGVEKDGDKSLELFKESAQAG 238
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAK 220
LY LG VY G V KD + AL F ++++ GHA A G + RG+ V + T+ +
Sbjct: 333 LYNLGVVYANGQGVPKDESKALDYFQQSAKLGHAKANYNLGVIYNRGLGVEKDTTQAFSY 392
Query: 221 RVSAAK----KARANL 232
AAK KA NL
Sbjct: 393 FQEAAKLGDDKAYYNL 408
>gi|385763839|gb|AFI78665.1| Sel1 domain protein repeat-containing protein [uncultured bacterium
ws034A6]
Length = 144
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
LV A G+P+AQ+ + + V+++ +AF ++ A +Q A + LG +Y+ GD
Sbjct: 29 LVPLAEAGNPEAQHRVAIMCQNGLGQVRNEARAFDMMKAAAEQGLAIAQHGLGFMYMEGD 88
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV---PECLTKLNAK 220
CV+++ A A+ F +A+++G AG+ + G V PE +L AK
Sbjct: 89 CVEQNSAEAVNWFRKAADQGLAGSLTTLAQMYENGNGVEQDPEEARRLYAK 139
>gi|417374176|ref|ZP_12144000.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|353600305|gb|EHC56255.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
Length = 647
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 432 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 484
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 485 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 535
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 536 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 595
Query: 229 RANLESNL 236
A NL
Sbjct: 596 NAQAHYNL 603
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 550 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 609
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 610 GDGVEKDLNKA 620
>gi|157106426|ref|XP_001649316.1| hypothetical protein AaeL_AAEL004514 [Aedes aegypti]
gi|108879836|gb|EAT44061.1| AAEL004514-PA [Aedes aegypti]
Length = 790
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 79 LEADNSNTHARYWLSKLHLKYHVPGACKAMGA-ALLVDAANMGDPDAQYELGCRLRVEND 137
L AD + A+ L +LH + + A AAN G+ A LG +D
Sbjct: 342 LLADKGDVQAQVGLGQLHYQGGRGISLDHQKALQYFSQAANAGNAVAMAYLGKIYLEGSD 401
Query: 138 YVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+++D AF Y +KA D +P LG +YL G V KD AL F +A+++G
Sbjct: 402 NIKADNDTAFKYFKKAADLGNPVGQSGLGVMYLHGKGVPKDTVKALKFFTQAADQGWVDG 461
Query: 197 AIAYGSLLLRGVQV 210
+ G++ G+ V
Sbjct: 462 QLQLGNMYFSGIGV 475
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++G+P Q LG + +A + +A DQ LG +Y +G VK
Sbjct: 417 AADLGNPVGQSGLGVMYLHGKGVPKDTVKALKFFTQAADQGWVDGQLQLGNMYFSGIGVK 476
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSL 203
+D A F+ AS+ GH A G +
Sbjct: 477 RDFKMANKYFNLASQSGHVLAFYNLGQM 504
>gi|344343559|ref|ZP_08774427.1| Sel1 domain protein repeat-containing protein [Marichromatium
purpuratum 984]
gi|343804982|gb|EGV22880.1| Sel1 domain protein repeat-containing protein [Marichromatium
purpuratum 984]
Length = 276
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ----QAFYYIEKAVDQLHPGALYLLGTVY 168
L+ AA+ GD +AQY+LG + V+ + + +Q +A +I KA +Q H A ++G +Y
Sbjct: 110 LLTAADTGDAEAQYQLGLAI-VQRHWERGEQRRLGEAADWIAKAAEQDHVRAQLVMGGLY 168
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V +D SAL + RA+ +G A G +L G V + L +
Sbjct: 169 EKGRGVIQDYESALAWYRRAATQGDPQAMARLGRMLRTGRGVEKNLVE 216
>gi|440771191|ref|ZP_20950110.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436422226|gb|ELP20064.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
Length = 722
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 17/184 (9%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL 112
E NDR +P + KE E A + D Y K + + P
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDKELSELYAP--------TD 558
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ + A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y GD
Sbjct: 559 VTNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAYNDGD 614
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V +D L +A+E G + A + G L L G +P+ L + +A + A
Sbjct: 615 GVAQDSKKYLSYLFKAAELGESYAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQA 674
Query: 233 ESNL 236
NL
Sbjct: 675 HYNL 678
>gi|115526708|ref|YP_783619.1| Sel1-like protein [Rhodopseudomonas palustris BisA53]
gi|115520655|gb|ABJ08639.1| Sel1-like protein [Rhodopseudomonas palustris BisA53]
Length = 386
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 72 KENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQY 126
K N+ A+E A+ + A + L+ L L +A GA L +A +G+P A Y
Sbjct: 157 KRNYGKAVEWYTLAAEAGDREAMFALAMLRLAGRAGPPNRAEGARWLASSAKLGNPKAAY 216
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
L + Q ++A + + D +P A Y L T Y G V+K++ ++
Sbjct: 217 NLALLYLDGQTFPQDVKRAAELLRLSADAGNPEAQYALATFYKEGTGVEKNLEQSVRLLQ 276
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPE 212
A+ G+ A + Y L G P+
Sbjct: 277 AAAVAGNVDAEVEYAIALFNGAGTPK 302
>gi|398863568|ref|ZP_10619128.1| TPR repeat-containing protein [Pseudomonas sp. GM78]
gi|398247343|gb|EJN32792.1| TPR repeat-containing protein [Pseudomonas sp. GM78]
Length = 448
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L AA G +AQY LG + +QA Y+ +KA +Q + A Y LG +Y
Sbjct: 353 SLYQKAAEQGYVEAQYNLGVLYFRGEGLTRDLKQAAYWYQKAAEQGYANAQYNLGLMYAK 412
Query: 171 GDCVKKDIASALWCFHRASEKGHAGA 196
G+ + D A F +A+E+GHAGA
Sbjct: 413 GEGLAPDEQLARTWFQKAAEQGHAGA 438
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ AA G AQ+ LG Q QQA +KA +Q + A Y LG +Y
Sbjct: 316 ASWFRKAAEQGFAKAQFNLGVLYFNGRGVAQDRQQAVSLYQKAAEQGYVEAQYNLGVLYF 375
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
G+ + +D+ A + + +A+E+G+A A G + +G
Sbjct: 376 RGEGLTRDLKQAAYWYQKAAEQGYANAQYNLGLMYAKG 413
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 17/162 (10%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +Q LG Q QA + KA +Q A + LG +Y G V
Sbjct: 286 AAEQGYATSQNNLGVMYTNGQGVAQDQHQAASWFRKAAEQGFAKAQFNLGVLYFNGRGVA 345
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + +A+E+G+ A G L RG + L + AA++ AN + N
Sbjct: 346 QDRQQAVSLYQKAAEQGYVEAQYNLGVLYFRGEGLTRDLKQAAYWYQKAAEQGYANAQYN 405
Query: 236 L---------MNPVE--------KAKEQFEVAAQAGCNLGLR 260
L + P E KA EQ AQ N+ ++
Sbjct: 406 LGLMYAKGEGLAPDEQLARTWFQKAAEQGHAGAQHALNITMK 447
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q QQA ++ +KA +Q + + LG +Y G V +D A F +A+E+G A A
Sbjct: 274 QDKQQAAHWYQKAAEQGYATSQNNLGVMYTNGQGVAQDQHQAASWFRKAAEQGFAKAQFN 333
Query: 200 YGSLLLRG 207
G L G
Sbjct: 334 LGVLYFNG 341
>gi|145640077|ref|ZP_01795671.1| hypothetical protein CGSHiII_00664 [Haemophilus influenzae PittII]
gi|145270807|gb|EDK10730.1| hypothetical protein CGSHiII_00664 [Haemophilus influenzae PittII]
gi|309751059|gb|ADO81043.1| Putative TPR repeat protein [Haemophilus influenzae R2866]
Length = 219
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQ LG + + Q +A + KA +Q + A LG +Y +K
Sbjct: 91 AAEQGDADAQLNLGAMYAIGHGVKQDGVEAVKWFRKAAEQGNAKAQNGLGMMYRGRLGIK 150
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
+D A+ + +A+E+G+ GA + G L +GVQV + L K
Sbjct: 151 QDYFKAVKWYRKAAEQGYGGAQVMLGFSYLSGKGVQVNKSLAK 193
>gi|344923465|ref|ZP_08776926.1| hypothetical protein COdytL_02305 [Candidatus Odyssella
thessalonicensis L13]
Length = 1006
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ++LG + QA ++ E A Q H A + LG +Y G V
Sbjct: 800 AAKQGYADAQFKLGAMHEHGKVIAKDGLQAVFWYEAAAKQGHREAQFNLGWMYGEGSGVA 859
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTKLNAKRVSAAKKARANLE 233
KD A A+ C+ A+ + H A G + RG++ L + K+ + K A+A
Sbjct: 860 KDEARAVLCYQAAAAQDHKEAQCNLGVMYKEGRGIEADNILAEYWLKQAAKQKYAQAQFY 919
Query: 234 SNLMNPVE--------KAKEQFEVA------AQAGCNLGLRWLQRIEEEE 269
++ + + E F +A A A NLG+ + ++ +E E
Sbjct: 920 LGMLYEQDLKGIKKNLRLSELFYLAAAEQGHASAQYNLGIMYFEKGDERE 969
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G ++QY L + +E + + + A Y+ EKA Q A Y LGT+Y G V
Sbjct: 653 AAEQGVANSQYCLAM-MHMEGRGIPKNYRLAVYWFEKAAKQDVTEAQYNLGTLYHEGTKV 711
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
KD A++ + +A+ KGHA A G + +G
Sbjct: 712 LKDSRKAVFWYKKAAAKGHAEAQCNLGWMYQKG 744
>gi|240145938|ref|ZP_04744539.1| Sel1 repeat family protein, partial [Roseburia intestinalis L1-82]
gi|257201955|gb|EEV00240.1| Sel1 repeat family protein [Roseburia intestinalis L1-82]
Length = 465
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 81 ADNSNTHARYWLSKLHLKYH----------VPGACK-AMGAALLVDAANMGDPDAQYELG 129
+D NTHA Y L++L+++ P K A L ++A +P A Y LG
Sbjct: 194 SDYGNTHASYQLARLYIRQESQKLSGESGTAPDYAKIAKAVKWLEESAAQENPFADYALG 253
Query: 130 CRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
RL E V +D ++A +++++A D + A Y LG +YL D K+I +A+ A
Sbjct: 254 -RLYREGTLVAADMEKAVFHLKRAADAGNSYAQYQLGKIYLEED--NKNIPAAIQYLTLA 310
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPE 212
+++ + AA G L L G ++P+
Sbjct: 311 AKQKNEFAAYRLGKLYLAGEELPK 334
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 75 FELALEADNSNTHARYWLSKLHLK---YHVPGACKAMGAALLVDAANMGDPDAQYELGCR 131
F L AD N++A+Y L K++L+ ++P A + L AA + A Y LG
Sbjct: 271 FHLKRAADAGNSYAQYQLGKIYLEEDNKNIPAAIQ-----YLTLAAKQKNEFAAYRLGKL 325
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
+ ++ + A +Y++ A D + A Y LG VYL G V++D A F +++E+
Sbjct: 326 YLAGEELPKNTELALHYLKMAADTGNQYAQYTLGKVYLIGKDVQQDKELAYDYFLKSAEQ 385
Query: 192 GHAGAA 197
G+ AA
Sbjct: 386 GNIYAA 391
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A N A Y L +L+ + + A L AA+ G+ AQY+LG ++ +E D +
Sbjct: 241 AAQENPFADYALGRLYREGTLVAADMEKAVFHLKRAADAGNSYAQYQLG-KIYLEED-NK 298
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+ A Y+ A Q + A Y LG +YL G+ + K+ AL A++ G+ A
Sbjct: 299 NIPAAIQYLTLAAKQKNEFAAYRLGKLYLAGEELPKNTELALHYLKMAADTGNQYAQYTL 358
Query: 201 GSLLLRGVQVPE 212
G + L G V +
Sbjct: 359 GKVYLIGKDVQQ 370
>gi|445268938|ref|ZP_21410223.1| hypothetical protein SEE436_021183, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|444888109|gb|ELY11733.1| hypothetical protein SEE436_021183, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 479
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 264 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 316
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 317 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 367
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 368 NDGDGVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 413
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 382 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 441
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 442 GDGVEKDLNKA 452
>gi|429753148|ref|ZP_19285964.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429174242|gb|EKY15724.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 807
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + A+Y L+ LHL + G L AA G+ A+ EL R Q
Sbjct: 66 AETGDAQAQYQLAHLHLDGKGMPKSEEKGTEWLAKAAENGNQKAEQELALCYRDGRGVPQ 125
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
S ++ + +IEK D+ L L Y GD V KD+ A + +A++KG+ A +
Sbjct: 126 STEKYYAWIEKNADKEKAETLLDLAKAYYAGDGVTKDVNKAKFWADKAAKKGNKEAELLL 185
Query: 201 GSLLLR-GVQVPECLTKLNAKRVSAAKKARANLESNLMN--PVE----KAKEQFEVAAQA 253
+ + PE + +L +A+A + + +N VE KA E FE AA
Sbjct: 186 ATWVYEINPSNPEAIQRLMQVAEKGDTEAQAMIGESYLNGKGVEQSESKAIEWFEKAAAK 245
Query: 254 G 254
G
Sbjct: 246 G 246
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 8/176 (4%)
Query: 37 MELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLH 96
M++ KG + E +I LN + + A E FE A A N A Y L+ +
Sbjct: 204 MQVAEKGDT---EAQAMIGESYLNGKGVEQSESKAIEWFEKA--AAKGNATALYHLANFY 258
Query: 97 LKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVD 154
+ P K AL AAN G+ DAQ +L L S + AF +I KAV+
Sbjct: 259 FYGNSPLIGKFPKKALDYYTQAANKGNVDAQRQLAVCLYNGIGGTASQRDAFNWILKAVN 318
Query: 155 -QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ 209
P L Y TG+ ++ +A A+ F +A++ G A G+LLL Q
Sbjct: 319 ANPSPITENNLAVCYATGNGTRQSVAQAVELFRKAADAGDVAAQYNLGALLLEEPQ 374
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A L AA+ GD AQY LG L E Q ++AF Y+EKA Q H AL LG
Sbjct: 344 AQAVELFRKAADAGDVAAQYNLGALLLEEPQ--QDVKKAFEYLEKAAAQNHLLALKKLGD 401
Query: 167 VYLTGDCVKKDIASALWCFHRASE 190
+ TG + A +++A++
Sbjct: 402 LNFTGKYTNQSYTRAFEYYNKAAK 425
>gi|420150505|ref|ZP_14657663.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751908|gb|EJF35637.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 278
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A AA G +AQ +LG QSD+QA + +KA DQ A LG Y
Sbjct: 111 AYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYY 170
Query: 170 TG-DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V+ D + LW + +A+ +G A GS +G +P+ TK
Sbjct: 171 KGLGVVQSDSDAVLW-YEKAANQGDVEAQRNLGSYYFKGQGIPQSYTK 217
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +Q +LG VQS ++A Y+ +KA +Q + A LG Y G VK
Sbjct: 81 AAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVK 140
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ A+ F +A+++ A A G +G+ V +
Sbjct: 141 QSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVVQ 177
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD +AQ LG QS +A ++ EKA +Q A +LG Y G V
Sbjct: 189 AANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVD 248
Query: 176 KDIASALWCFHRA 188
K A++ F +
Sbjct: 249 KSQKRAIYWFEKG 261
>gi|197251613|ref|YP_002146951.1| hypothetical protein SeAg_B2107 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|440763438|ref|ZP_20942478.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440769041|ref|ZP_20948002.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|197215316|gb|ACH52713.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|436415609|gb|ELP13527.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436420014|gb|ELP17884.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
Length = 722
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL 112
E NDR +P + KE E A + D Y K + + P
Sbjct: 507 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDKELSELYAP--------TD 558
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ + A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y GD
Sbjct: 559 VTNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAYNDGD 614
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
V +D L +A+E G + A + G L L G +P+ L
Sbjct: 615 GVAQDSKKYLSYLFKAAELGESYAQLEVGYLNLIGEGMPKNL 656
>gi|359299880|ref|ZP_09185719.1| hypothetical protein Haemo_06997 [Haemophilus [parainfluenzae] CCUG
13788]
Length = 383
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LLV AA AQY L + Y ++++ A +++E+A + P ALY LG Y G
Sbjct: 206 LLVKAAKKEYGYAQYLLAMNFF--DLYSENNKGALFWLERAANNDEPEALYQLGVYYSEG 263
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ D+A ++ + RA+E HA AA+A + G+ V +
Sbjct: 264 --AEADLAKSIKYYQRAAELNHADAALALSYIYDEGISVEQ 302
>gi|384411679|ref|YP_005621044.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932053|gb|AEH62593.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 375
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+E G R ++ QS QA Y +KA D H A + LG +Y G V ++ +A +
Sbjct: 46 FESGLRYYHGHNVAQSYSQAREYFQKAADLGHAEAQFYLGALYERGKGVARNYKTAFSWY 105
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPE----CLTKLNAKRVSAAKKARANLESNLMNPVE 241
+A+++G A GS+ GV VP+ LT L K A+ NL +
Sbjct: 106 QKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRAAGQGDKVAQTNLGDMYYQGLG 165
Query: 242 KAKE 245
A+E
Sbjct: 166 TAQE 169
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++G +AQ+ LG ++ + AF + +KA DQ A +G++Y G V
Sbjct: 72 AADLGHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVP 131
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
++ +AL RA+ +G A G + +G+
Sbjct: 132 QNFQAALTWLQRAAGQGDKVAQTNLGDMYYQGL 164
>gi|167536781|ref|XP_001750061.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771390|gb|EDQ85057.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 81 ADNSNTHARYWLSKLHLKYH-VPGACKAMGAALLVDAANMGDPDAQYELG----CRLRVE 135
AD + ++ L +LHL+ H VP + L + A N GDPDA LG L VE
Sbjct: 229 ADRGDAPSQLTLGQLHLQGHGVPQDFQRARHYLELAAGN-GDPDAMASLGDMYVNGLGVE 287
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
D + A Y+E A + LG +YL G V++D A FH+A+ GH
Sbjct: 288 QD----NATALKYLETAAQRNSAAGRTSLGVMYLNGWSVQRDPEMAYKLFHKAAAAGHPD 343
Query: 196 AAIAYGSLLLRGV 208
GSL G
Sbjct: 344 GQHNLGSLYYSGT 356
>gi|157119150|ref|XP_001659361.1| hypothetical protein AaeL_AAEL008521 [Aedes aegypti]
gi|108875461|gb|EAT39686.1| AAEL008521-PA [Aedes aegypti]
Length = 790
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 79 LEADNSNTHARYWLSKLHLKYHVPGACKAMGA-ALLVDAANMGDPDAQYELGCRLRVEND 137
L AD + A+ L +LH + + A AAN G+ A LG +D
Sbjct: 342 LLADKGDVQAQVGLGQLHYQGGRGISLDHQKALQYFSQAANAGNAVAMAYLGKIYLEGSD 401
Query: 138 YVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+++D AF Y +KA D +P LG +YL G V KD AL F +A+++G
Sbjct: 402 NIKADNDTAFKYFKKAADLGNPVGQSGLGVMYLHGKGVPKDTVKALKFFTQAADQGWVDG 461
Query: 197 AIAYGSLLLRGVQV 210
+ G++ G+ V
Sbjct: 462 QLQLGNMYFSGIGV 475
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++G+P Q LG + +A + +A DQ LG +Y +G VK
Sbjct: 417 AADLGNPVGQSGLGVMYLHGKGVPKDTVKALKFFTQAADQGWVDGQLQLGNMYFSGIGVK 476
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSL 203
+D A F+ AS+ GH A G +
Sbjct: 477 RDFKMANKYFNLASQSGHVLAFYNLGQM 504
>gi|329119677|ref|ZP_08248358.1| TPR repeat protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327464274|gb|EGF10578.1| TPR repeat protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 527
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+SD+++F ++EKA Q + A Y LG Y G V KD A A + +A+EKGH AA
Sbjct: 199 KSDEKSFEWLEKAARQGYTEAEYALGLRYGLGRGVAKDDAQAAAWYRKAAEKGHTAAAGL 258
Query: 200 YGSLLLRGVQV 210
GS L G V
Sbjct: 259 LGSRYLTGNGV 269
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G +A+Y LG R + + D QA + KA ++ H A LLG+ YLTG+
Sbjct: 208 LEKAARQGYTEAEYALGLRYGLGRGVAKDDAQAAAWYRKAAEKGHTAAAGLLGSRYLTGN 267
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
V KD A F +A+ KG A A G + G VP+ T+
Sbjct: 268 GVAKDDKQAAEWFAKAAAKGDAFAQYNLGLMYNLGRGVPQDRTR 311
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGAL---YLLGTVYL 169
L AA GDP A+Y + R R+ + D +A +++KA ++ Y LG++YL
Sbjct: 353 LAKAAEQGDPRAEYNMAVRYRIGRGVEKDDAKAIEWLKKAAAHETSASVLAQYDLGSLYL 412
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G+ V +D A +A+ + A +L++ G P+ K
Sbjct: 413 KGEGVAQDDKQAAEWLEKAAGHDYIHAQKKLAALVITGTGTPQDTAK 459
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 112 LLVDAANMGDPDAQYEL-GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
LL AA G AQY L + N Q D+QA Y++ KA +Q P A Y + Y
Sbjct: 315 LLTKAAEQGRLSAQYLLYSLYAQGRNGVPQDDKQASYWLAKAAEQGDPRAEYNMAVRYRI 374
Query: 171 GDCVKKDIASAL-WCFHRASEKGHAGAAIAY--GSLLLRGVQVPE 212
G V+KD A A+ W A+ + A Y GSL L+G V +
Sbjct: 375 GRGVEKDDAKAIEWLKKAAAHETSASVLAQYDLGSLYLKGEGVAQ 419
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY+LG Q D+QA ++EKA + A L + +TG +D A +
Sbjct: 403 AQYDLGSLYLKGEGVAQDDKQAAEWLEKAAGHDYIHAQKKLAALVITGTGTPQDTAKGME 462
Query: 184 CFHRASEKGHAGA----AIAYGSLLLRGVQVP-ECLTKLNAKRVSAAKKARANLE 233
A+E+G A + +AY + L Q P + L +K+ARA LE
Sbjct: 463 LLRAAAEQGDATSQTLLGMAYNTGLFGIGQDPAQARVWLEKAAAQGSKEARAYLE 517
>gi|213963117|ref|ZP_03391375.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
sputigena Capno]
gi|213954201|gb|EEB65525.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
sputigena Capno]
Length = 810
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + A+Y L+ LHL + GA L AA G+ A+ EL R Q
Sbjct: 66 AETGDAQAQYQLAHLHLDGKGMPKSEEKGAEWLAKAAENGNQKAEQELALCYRDGRGVAQ 125
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
S ++ + +IEK D L L Y GD V KD+ A + +A++KG
Sbjct: 126 STEKYYAWIEKNADNEKAETLLDLAKAYYAGDGVTKDVNKAKFWAEKAAKKG 177
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 28 WLHSRN-------KKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKENFELALE 80
W++ N ++ M++ KG + E +I LN + + A E FE A
Sbjct: 188 WVYETNPSNPDGIQRLMQVAEKGDA---EAQAMIGESYLNGKGVEQSESKAIEWFEKA-- 242
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
A N A Y L+ + + P K AL AAN G+ DAQ +L L
Sbjct: 243 AAKGNATALYHLANFYFYGNSPLIGKFPKKALDYYTQAANKGNVDAQRQLAVCLYNGIGG 302
Query: 139 VQSDQQAFYYIEKAVD-QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
S + AF +I KAV+ P L Y TG+ ++ +A A+ F +A++ G A
Sbjct: 303 AASQRDAFNWILKAVNANPSPITENNLAVCYATGNGTRQSVAQAVELFRKAADAGDVTAQ 362
Query: 198 IAYGSLLLRGVQ 209
G+LLL Q
Sbjct: 363 YNLGTLLLEEPQ 374
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A L AA+ GD AQY LG L E Q ++AF Y+EKA Q H AL LG
Sbjct: 344 AQAVELFRKAADAGDVTAQYNLGTLLLEEPQ--QDVKKAFEYLEKAAAQNHLLALKKLGD 401
Query: 167 VYLTGDCVKKDIASALWCFHRASE 190
+ TG + A A +++A++
Sbjct: 402 LNFTGKYTNQSYARAFEYYNKAAK 425
>gi|340726986|ref|XP_003401832.1| PREDICTED: protein sel-1 homolog 1-like [Bombus terrestris]
Length = 741
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ G+P A LG +D V+ D + A+ Y +KA + +P LG +YL G V
Sbjct: 374 AADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAAELGNPVGQSGLGLMYLYGRGV 433
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++D A AL F +A+E+G + G++ G V
Sbjct: 434 ERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGV 469
>gi|329849411|ref|ZP_08264257.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328841322|gb|EGF90892.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 555
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%)
Query: 79 LEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
+ AD +++ LS+++ + + A + AA GD +QY G L
Sbjct: 121 MAADQGLVYSQIRLSEMYSRGYGVEKNDETSAKWMRKAAEQGDAASQYNFGIILSKGRGV 180
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ D +A + A +Q A Y LG ++ G V+K +A+ F +A+E+GHA A
Sbjct: 181 AEDDVEAVKWFSLAAEQGDIDAQYALGVAFINGAGVEKSDKAAVAWFRKAAEQGHALAQR 240
Query: 199 AYGSLLLRG 207
+ +L +G
Sbjct: 241 QFARMLGQG 249
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV------QSDQQAFYYIEKAVDQLHP 158
A+ ++ + AA GD +AQ +LG NDY Q QA + A DQ
Sbjct: 39 SSALAQSVHLAAAEQGDAEAQRKLG------NDYYEGKVVPQDYAQALKWYRLAADQGDA 92
Query: 159 GALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
A + LGT+YL G V +D A AL +H A+++G + I + RG V
Sbjct: 93 RAYHNLGTIYLEGKVVTQDYAEALKWYHMAADQGLVYSQIRLSEMYSRGYGV 144
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +AQ+ L RL ++ D +AF +++ + +Q A Y L +Y G
Sbjct: 302 AAEQGDREAQFNLAVRLMKGTGVLRDDAEAFTWMKLSAEQGLVNAQYHLALLYELGRGTD 361
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D+A +A+ +G A A G + +G P+
Sbjct: 362 MDMAQRNQWMEKAANQGWAAAQYDVGVRVYKGDGFPK 398
>gi|16765339|ref|NP_460954.1| hypothetical protein STM2007 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|378989396|ref|YP_005252560.1| hypothetical protein STMUK_2036 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|16420537|gb|AAL20913.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|332988943|gb|AEF07926.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 564
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 349 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 401
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 402 -----TNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 452
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD V +D L +A+E G + A + G L L G +P+ L
Sbjct: 453 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNL 498
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 467 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 526
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 527 GDGVEKDLNKA 537
>gi|390948949|ref|YP_006412708.1| Sel1 repeat protein [Thiocystis violascens DSM 198]
gi|390425518|gb|AFL72583.1| Sel1 repeat protein [Thiocystis violascens DSM 198]
Length = 276
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD----QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA DPDAQY LG + +E + + +A ++I +A +Q H A +LLG +Y G
Sbjct: 113 AAENRDPDAQYRLGLAI-LERHWDRGKPVALDEATHWIRQAAEQNHARAQFLLGKLYQKG 171
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
V +D A F RA+E+G + A G L+ G
Sbjct: 172 RGVIQDDQEAAIWFRRAAEQGDSLAMSHLGKLMKAG 207
>gi|417688411|ref|ZP_12337655.1| hypothetical protein SB521682_0652 [Shigella boydii 5216-82]
gi|332094316|gb|EGI99367.1| hypothetical protein SB521682_0652 [Shigella boydii 5216-82]
Length = 325
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ Q D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSQDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|416228537|ref|ZP_11627691.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
46P47B1]
gi|326563872|gb|EGE14123.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
46P47B1]
Length = 297
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 71 AKENFELALEADNSNTHAR---YWLSKLHLKYHVP----GACKAMGAALLVD-------- 115
A F LA E HA+ +W H + V GA A G + D
Sbjct: 35 AGAQFNLADEYYQQGNHAKAFEWWQKSAHQGHAVAQTILGAMYAEGDGVRQDYHKAFEWT 94
Query: 116 --AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA+ G +AQ+ LG R Q DQ+A + KA +Q A Y LG +Y G
Sbjct: 95 TKAAHQGFAEAQFNLGVMYRKGQGVSQDDQKAVEWYTKAANQGDAQAQYNLGVMYAQGKG 154
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
V++D ++ + +A+++G+A A + G V + K
Sbjct: 155 VRQDYYKSVEWYTKAAKQGYADAQFNLALMYYEGQGVRQDYHK 197
>gi|54295478|ref|YP_127893.1| enhanced entry protein EnhC [Legionella pneumophila str. Lens]
gi|53755310|emb|CAH16804.1| enhanced entry protein EnhC [Legionella pneumophila str. Lens]
Length = 1200
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AEYFLESKHAANKKLGIIWLNKAAENGDPKALTELGRFYVAGQM 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN 218
V KD A + ++A+ + + A + G L L Q E + LN
Sbjct: 204 VAKDTAKGVELLNKAASEQYTPAMLELGKLALMQNQYDEAIQWLN 248
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 495 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 554
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 555 QQALNWLTDSAFKGNQRAQYVLARILRQGIVGPD 588
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 956 SLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1015
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1016 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1055
>gi|347964156|ref|XP_310466.4| AGAP000615-PA [Anopheles gambiae str. PEST]
gi|333466863|gb|EAA06387.4| AGAP000615-PA [Anopheles gambiae str. PEST]
Length = 849
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 47 LKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACK 106
L EVD + D LI + L AD + A+ L +LH +
Sbjct: 347 LDEVDNSGPSSGILDNDLIDYYQ---------LLADKGDVQAQVGLGQLHYQ-------- 389
Query: 107 AMGAALLVD----------AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQ 155
G + +D AAN G+ A LG +D +++D + AF Y +KA D
Sbjct: 390 -GGRGIPLDHQRALQYFSQAANAGNAVAMAFLGKIYLEGSDNIKADNETAFKYFKKAADL 448
Query: 156 LHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+P LG +YL G V+KD AL F +A+++G + G++ G+ V
Sbjct: 449 GNPVGQSGLGIMYLHGKGVRKDTGKALKYFAKAADQGWVDGQLQLGNMYYSGIGVQRDF- 507
Query: 216 KLNAKRVSAAKKA 228
KL K S A ++
Sbjct: 508 KLAIKYFSLASQS 520
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA++G+P Q LG + + V+ D +A Y KA DQ LG +Y +G V
Sbjct: 445 AADLGNPVGQSGLGI-MYLHGKGVRKDTGKALKYFAKAADQGWVDGQLQLGNMYYSGIGV 503
Query: 175 KKDIASALWCFHRASEKGH 193
++D A+ F AS+ GH
Sbjct: 504 QRDFKLAIKYFSLASQSGH 522
>gi|350414268|ref|XP_003490261.1| PREDICTED: protein sel-1 homolog 1-like [Bombus impatiens]
Length = 741
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ G+P A LG +D V+ D + A+ Y +KA + +P LG +YL G V
Sbjct: 374 AADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAAELGNPVGQSGLGLMYLYGRGV 433
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++D A AL F +A+E+G + G++ G V
Sbjct: 434 ERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGV 469
>gi|241202992|ref|YP_002974088.1| peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856882|gb|ACS54549.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 1263
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA+ GD A +E+G R + + DQ QA + + A D+ A Y LG++Y G
Sbjct: 984 LADAASSGDTLALFEIGARYSDGRNGMTVDQKQAASWYQLAADKGFAPAQYRLGSMYEKG 1043
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DI A + +A+ +G+A A A+ Y S
Sbjct: 1044 NGVERDITKAKGFYEQAANQGNASAMHNLAVLYAS 1078
>gi|328793806|ref|XP_392802.4| PREDICTED: protein sel-1 homolog 1-like [Apis mellifera]
Length = 741
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ G+P A LG +D V+ D + A+ Y +KA + +P LG +YL G V
Sbjct: 374 AADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAAELGNPVGQSGLGLMYLYGRGV 433
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++D A AL F +A+E+G + G++ G V
Sbjct: 434 ERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGV 469
>gi|440796127|gb|ELR17236.1| Sel1 domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 416
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 43/81 (53%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY LG V QSD+QA + KA Q H A Y LG +Y G V
Sbjct: 163 AAAKGDATAQYNLGQMYEVGEGVAQSDKQAAAWYAKAAAQGHTDAQYDLGVMYQKGLGVA 222
Query: 176 KDIASALWCFHRASEKGHAGA 196
+D A A + +A+++GHA A
Sbjct: 223 EDWARAAEWYRKAADQGHANA 243
>gi|189502614|ref|YP_001958331.1| hypothetical protein Aasi_1288 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498055|gb|ACE06602.1| hypothetical protein Aasi_1288 [Candidatus Amoebophilus asiaticus
5a2]
Length = 731
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+AF + +KA DQ HP A LG +Y G V+KD A + +A+E+GH A G +
Sbjct: 633 EAFKWYQKAADQGHPNAQCRLGWMYQNGKGVRKDHTKAFEWYEKAAEQGHEKAQFDLGEI 692
Query: 204 LLRGVQVPECLTK 216
G V E K
Sbjct: 693 YQYGWGVAENYNK 705
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G P+AQ LG + + +AF + EKA +Q H A + LG +Y G V
Sbjct: 641 AADQGHPNAQCRLGWMYQNGKGVRKDHTKAFEWYEKAAEQGHEKAQFDLGEIYQYGWGVA 700
Query: 176 KDIASALWCFHRASEKGHAGA 196
++ AL + +A+E G A
Sbjct: 701 ENYNKALEWYRKAAENGDQAA 721
>gi|300771856|ref|ZP_07081727.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300761242|gb|EFK58067.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 828
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
+E+A A+ +N +A Y L K +L ++ AAN GD +Q+ G L
Sbjct: 700 YEIA--ANKNNKNAMYRLGKCYLSGTGTRKNESQAYHWFATAANYGDIPSQFNAGLLLLK 757
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
N + ++ I +A +Q H A + LG YL GD V++ ++ + A+E GH
Sbjct: 758 GNGVAVNKEEGIKLIRQAAEQNHAAAQFELGNCYLMGDGVEESEEQTMYWYELAAENGHE 817
Query: 195 GA 196
A
Sbjct: 818 KA 819
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+AF Y E A ++ + A+Y LG YL+G +K+ + A F A+ G + G L
Sbjct: 695 EAFKYYEIAANKNNKNAMYRLGKCYLSGTGTRKNESQAYHWFATAANYGDIPSQFNAGLL 754
Query: 204 LLRGVQVPECLTKLNAKRV--SAAKKARANLESNLMN------PVEKAKEQ----FEVAA 251
LL+G V + K ++ AA++ A + L N VE+++EQ +E+AA
Sbjct: 755 LLKGNGV--AVNKEEGIKLIRQAAEQNHAAAQFELGNCYLMGDGVEESEEQTMYWYELAA 812
Query: 252 QAG 254
+ G
Sbjct: 813 ENG 815
>gi|424898189|ref|ZP_18321763.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393182416|gb|EJC82455.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 1256
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + + DQ QA + + + D+ A Y LG++Y G
Sbjct: 977 LADAAQGGDALALFEIGARYSDGRNGITVDQKQAASWYQLSADKGFAPAEYRLGSMYEKG 1036
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DIA A + +A+ +G+A A A+ Y S
Sbjct: 1037 NGVERDIAKAKGFYEQAANQGNASAMHNLAVLYAS 1071
>gi|5305321|gb|AAD41587.1|AF057704_3 enhanced entry protein EnhC [Legionella pneumophila 130b]
Length = 1201
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AEYFLESKHAGNKKLGIIWLNKAAENGDPKALTELGRFYVAGQM 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN 218
V KD A + ++A+ + + A + G L L Q E + LN
Sbjct: 204 VAKDTAKGVELLNKAASEQYTPAMLELGKLALMQNQYDEAIQWLN 248
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 496 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 555
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 556 QQALNWLTDSAFKGNKRAQYVLARILRQGIVGPD 589
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 957 SLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1016
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1017 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1056
>gi|307611517|emb|CBX01191.1| enhanced entry protein EnhC [Legionella pneumophila 130b]
Length = 1200
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+DAA G+P AQY L +E+ + + + ++ KA + P AL LG Y+ G
Sbjct: 145 IDAAKNGNPIAQYTL-AEYFLESKHAGNKKLGIIWLNKAAENGDPKALTELGRFYVAGQM 203
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLN 218
V KD A + ++A+ + + A + G L L Q E + LN
Sbjct: 204 VAKDTAKGVELLNKAASEQYTPAMLELGKLALMQNQYDEAIQWLN 248
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G+ Q+E+G + +Q D A + E A +Q H GA Y LG +YL + D
Sbjct: 495 LGNAQTQFEIGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDY 554
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
AL ++ KG+ A +L +G+ P+
Sbjct: 555 QQALNWLTDSAFKGNKRAQYVLARILRQGIVGPD 588
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +A+ G P+A +L +++QQA + +KA + ALY LG + T
Sbjct: 956 SLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSET 1015
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G VK D AL + AS+KG+ A +A + G+ V
Sbjct: 1016 GVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1055
>gi|195331395|ref|XP_002032388.1| GM23543 [Drosophila sechellia]
gi|194121331|gb|EDW43374.1| GM23543 [Drosophila sechellia]
Length = 818
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 80/195 (41%), Gaps = 17/195 (8%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELG 129
A E F++A A N+ A +L KL+L+ A AA MGDP Q LG
Sbjct: 357 ALEYFKMAATAGNAVGFA--FLGKLYLEGSEQIKADNDAAFGYFSKAAEMGDPVGQSGLG 414
Query: 130 CR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
L V D ++ A Y +A DQ LG +Y TG+ VK D A F
Sbjct: 415 LMYLKGLGVPKDSIK----ALSYFTQAADQGWVDGQLQLGNMYFTGNGVKIDYKLAFKYF 470
Query: 186 HRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNP 239
+ A++ GH G AYG +LR K ++R + + N
Sbjct: 471 NLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMMAYSDYKNNR 530
Query: 240 VEKAKEQFEVAAQAG 254
+++A Q+ + A+ G
Sbjct: 531 IDEAYMQYSLMAEMG 545
>gi|126651405|ref|ZP_01723609.1| hypothetical protein BB14905_06974 [Bacillus sp. B14905]
gi|126591658|gb|EAZ85754.1| hypothetical protein BB14905_06974 [Bacillus sp. B14905]
Length = 428
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
D DAQY+LG + +++ + E A Q + A Y+LG Y G V+++
Sbjct: 162 DTDAQYQLGEYYNAKEGNCFQPEKSLKWFELAAAQGNADAQYVLGNFYFEGVGVEENYTQ 221
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
A + +A+ +GHA AA + G VP+ T
Sbjct: 222 AFSLYEKAALQGHADAANNLADMYFNGEGVPQDFT 256
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 116 AANMGDPDAQYELG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G DAQY LG L D + + ++ E+A +Q H A Y LG ++ G
Sbjct: 301 SAETGYVDAQYRLGGIYLEGRLDQAKDINRGLFWYERAAEQFHIDAFYDLGFIWSKGLTG 360
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
++I + F +A+ +G A A + G + +GV V L
Sbjct: 361 IRNIEKGIHWFKQAALQGDADAKLQLGHIYNKGVGVARNL 400
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Query: 52 RVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAA 111
+++D +L+ +I L K A E+ +T A+Y L + + G C +
Sbjct: 138 KILDEEDLDHEVMIDLYKEAVED---------QDTDAQYQLGEYYNA--KEGNCFQPEKS 186
Query: 112 L--LVDAANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
L AA G+ DAQY LG + VE +Y Q AF EKA Q H A L
Sbjct: 187 LKWFELAAAQGNADAQYVLGNFYFEGVGVEENYTQ----AFSLYEKAALQGHADAANNLA 242
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV-PECLTKLNAKRVSA 224
+Y G+ V +D A F A+ K A A G + +G+ V + NA + SA
Sbjct: 243 DMYFNGEGVPQDFTLARKWFDFAASKNVAEAMFTLGIMYEQGLGVKKDTNAAFNAYKKSA 302
>gi|323450627|gb|EGB06507.1| hypothetical protein AURANDRAFT_3074, partial [Aureococcus
anophagefferens]
Length = 224
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD Q LGC L E + ++AF Y DQ Y LG Y+ GD +
Sbjct: 144 AADRGDAYGQTSLGCLLYSEKRF----EEAFRYYALGADQGFTNGEYNLGVCYMRGDGTE 199
Query: 176 KDIASALWCFHRASEKGHAGA 196
D+ A + F RA+ KG A
Sbjct: 200 VDLGKARYWFERAAAKGDESA 220
>gi|437206389|ref|ZP_20712507.1| hypothetical protein SEEE1831_09987, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435206515|gb|ELN90031.1| hypothetical protein SEEE1831_09987, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
Length = 201
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ + A GD AQY LG + E + D A ++ ++ +Q HPGAL L Y GD
Sbjct: 38 VTNKAKQGDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAYNDGD 93
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA--KRVSAAKKARA 230
V +D L +A+E G + A + G L L G +P+ L + K+ + A+A
Sbjct: 94 GVTQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQA 153
Query: 231 NLESNLM--------NPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEK 270
+ LM + KAK A + G L L+ + + K
Sbjct: 154 HYNLGLMYRNGDGVEKDLNKAKLHLTAAVKGGVKPALAALKELTPQTK 201
>gi|237748172|ref|ZP_04578652.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379534|gb|EEO29625.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 537
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVEN-DYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
A+ AA +A G+ +AQ LG RL +E ++ + +AF + +A DQ + A LG
Sbjct: 284 AVAAAWYQKSAEQGNAEAQNNLG-RLYMEGGEFEGREDEAFMWFSRAADQGYAEAQTNLG 342
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+Y G V KD++ A + + +A+EKG A A
Sbjct: 343 VLYSYGLGVDKDLSKAFYWYQQAAEKGQAEGAF 375
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+ +A + A + LG ++ G+ VK+D A + + +A++KGH AA G L + G
Sbjct: 145 WYSRAAEHGRTDAQFALGEMFEAGEGVKRDYKKAAFWYKKAADKGHLMAATKLGILYMEG 204
Query: 208 VQVPECLTKLNAKRVSAAKKARANLESNL 236
V + K A AAK+ A +SNL
Sbjct: 205 RGVKQDDAKAAALLSHAAKRGIALAQSNL 233
>gi|424873569|ref|ZP_18297231.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393169270|gb|EJC69317.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 1267
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA+ GD A +E+G R + + DQ QA + + + D+ A Y LG++Y G
Sbjct: 988 LADAASSGDALALFEIGARYSDGRNGMTVDQKQAASWYQLSADKGFAPAEYRLGSMYEKG 1047
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DIA A + +A+ +G+A A A+ Y S
Sbjct: 1048 NGVERDIARAKGFYEQAANQGNASAMHNLAVLYAS 1082
>gi|319897180|ref|YP_004135375.1| hypothetical protein HIBPF09060 [Haemophilus influenzae F3031]
gi|317432684|emb|CBY81047.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 183
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 112 LLVDAANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L + A GD AQ LG L V+ DY + A + KA +Q A LG +
Sbjct: 51 LWLPLAEQGDAQAQGGLGMMYERGLGVKQDYFK----AVNWYRKAAEQGDADAQLNLGMM 106
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
Y G VK+D ++ F +A+E+G+A A A G+L L +GVQV + L K
Sbjct: 107 YAIGRGVKQDDVESVKWFRKAAEQGYAPAQFALGALYLLGQGVQVNKSLAK 157
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQ LG + Q D ++ + KA +Q + A + LG +YL G V+
Sbjct: 91 AAEQGDADAQLNLGMMYAIGRGVKQDDVESVKWFRKAAEQGYAPAQFALGALYLLGQGVQ 150
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSL 203
+ + A F +A + G YG L
Sbjct: 151 VNKSLAKEWFGKACDNGEQRGCEYYGKL 178
>gi|163798156|ref|ZP_02192091.1| hypothetical protein BAL199_22307 [alpha proteobacterium BAL199]
gi|159176545|gb|EDP61124.1| hypothetical protein BAL199_22307 [alpha proteobacterium BAL199]
Length = 200
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ+ +G ++ + Q + +A + KA +Q H A LG +Y G V K
Sbjct: 50 AEQGDAYAQFNIGLMYKMGDGVTQDNAEALKWYRKAAEQGHAAAQNNLGGMYERGVGVTK 109
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D A A+ + +A+E+G+ A G + RG V
Sbjct: 110 DYAEAVKWYRKAAEQGYVFAQFNIGLMYKRGDGV 143
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 160 ALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
A + +G +Y GD V +D A AL + +A+E+GHA A G + RGV V +
Sbjct: 57 AQFNIGLMYKMGDGVTQDNAEALKWYRKAAEQGHAAAQNNLGGMYERGVGVTK 109
>gi|331651148|ref|ZP_08352173.1| TPR repeat protein [Escherichia coli M718]
gi|331050889|gb|EGI22941.1| TPR repeat protein [Escherichia coli M718]
Length = 316
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A+ GD AQ++L R ++ +QS + A Y+ A Q A Y LG +Y G V +
Sbjct: 27 ADKGDATAQFKLAELYRSGSEGIQSYKDAVYWYSLAAKQGLTEAQYNLGVMYAHGYGVSQ 86
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+ A C+ A+EKG A G L +G V K A AA ++NL
Sbjct: 87 NYEKAFECYQMAAEKGFPEAQGNLGVLYSKGSGVIRDYGKAIAWLNKAANSGLVTAQTNL 146
Query: 237 ------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
N + A + + +AA+ G + L R+ E
Sbjct: 147 ALLYDETNKKDLADKWYRIAAEQGDKVAQYHLGRLYYE 184
>gi|42526681|ref|NP_971779.1| hypothetical protein TDE1171 [Treponema denticola ATCC 35405]
gi|41816874|gb|AAS11660.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
Length = 267
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 64 LIPLLKTAKENFE-LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDP 122
+I LL A + FE + A+ + A++ L+ ++ K K AA G
Sbjct: 12 MIALLCFADKKFEKVKAAAEQGDAFAQFNLAAMYDKGDESLVDKKQAVYWYTKAAEQGYD 71
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
AQ L + + +QAFY+ KA +Q + A +LG +Y GD D A
Sbjct: 72 VAQLFLAFMYDIGDGIPIDKKQAFYWYTKAAEQGNVAAQCILGLMYSNGDGTPVDKKQAF 131
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRG 207
+ F +A+E+G+A A G + +G
Sbjct: 132 YWFKKAAEQGYAKAQFNLGGMYYKG 156
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG N + +QAFY+ +KA +Q + A + L +Y GD +
Sbjct: 137 AAEQGYAKAQFNLGGMYYKGNGILTDKKQAFYWFKKAAEQGYAEAQFNLALMYYNGDGIL 196
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
D A + + +++EKG A A G + G
Sbjct: 197 ADKKQAFYWYTKSAEKGLAFAQFNLGLMYSNG 228
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ L ++ + +QA Y+ KA +Q + A L +Y GD +
Sbjct: 29 AAEQGDAFAQFNLAAMYDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAFMYDIGDGIP 88
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
D A + + +A+E+G+ A G + G P
Sbjct: 89 IDKKQAFYWYTKAAEQGNVAAQCILGLMYSNGDGTP 124
>gi|445498179|ref|ZP_21465034.1| Sel1-like repeat-containing serine/threonine protein kinase
[Janthinobacterium sp. HH01]
gi|444788174|gb|ELX09722.1| Sel1-like repeat-containing serine/threonine protein kinase
[Janthinobacterium sp. HH01]
Length = 202
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+ DAQ+ LG + Q +QA + KA Q A Y++G +Y TG+ V +
Sbjct: 45 AKAGNADAQHLLGLMYYMGRGVTQDYKQALEWHRKAALQGKADAQYVVGAMYYTGNAVIQ 104
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLR 206
D A+ F +A+E+GH A A G L+ R
Sbjct: 105 DHKQAVSWFRKAAEQGHPDAQQALG-LMYR 133
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY---LTGD 172
AA G DAQY +G N +Q +QA + KA +Q HP A LG +Y + G
Sbjct: 80 AALQGKADAQYVVGAMYYTGNAVIQDHKQAVSWFRKAAEQGHPDAQQALGLMYRYHMAGM 139
Query: 173 CVKKDIASALW 183
IA LW
Sbjct: 140 PQDNVIAYMLW 150
>gi|393780227|ref|ZP_10368447.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608869|gb|EIW91703.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 278
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A AA G +AQ +LG QSD+QA + +KA DQ A LG Y
Sbjct: 111 AYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYY 170
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V + + A+ + +A+ +G A GS +G VP+ TK
Sbjct: 171 KGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGVPQSYTK 217
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +Q +LG VQS ++A Y+ +KA +Q + A LG Y G VK
Sbjct: 81 AAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVK 140
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ A+ F +A+++ A A G +G+ V +
Sbjct: 141 QSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQ 177
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD +AQ LG QS +A ++ EKA +Q A +LG Y G V
Sbjct: 189 AANQGDVEAQRNLGSYYFKGQGVPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVD 248
Query: 176 KDIASALWCFHRA 188
K A++ F +
Sbjct: 249 KSQKRAIYWFEKG 261
>gi|260753360|ref|YP_003226253.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552723|gb|ACV75669.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 375
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+E G R ++ QS QA Y +KA D H A + LG +Y G V ++ +A +
Sbjct: 46 FESGLRYYHGHNVAQSYSQAREYFQKAADLGHAEAQFYLGALYERGKGVARNYKTAFSWY 105
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPE----CLTKLNAKRVSAAKKARANL 232
+A+++G A GS+ GV VP+ LT L K A+ NL
Sbjct: 106 QKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRAAGQGDKVAQTNL 156
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++G +AQ+ LG ++ + AF + +KA DQ A +G++Y G V
Sbjct: 72 AADLGHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVP 131
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ +AL RA+ +G A G + +G+ P+ AA + A E N
Sbjct: 132 QNFQAALTWLQRAAGQGDKVAQTNLGDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYN 191
Query: 236 L 236
L
Sbjct: 192 L 192
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G A+Y LG Q A + +KA DQ P A Y + +Y G V
Sbjct: 180 AAAQGYALAEYNLGVMYSQGQGVTQDMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVV 239
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLL 204
+D AL + +A+++G A + SLL
Sbjct: 240 QDQKVALAWYQKAADQGFVKAQLNLASLL 268
>gi|303272499|ref|XP_003055611.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463585|gb|EEH60863.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 228
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC- 173
DA+ G P A E G D +AFY+ EK+ D P ++ G YL G C
Sbjct: 48 DASLPGTPRALCEFGKEFNSAVD-ASEHWKAFYWFEKSADHGDPEGMFWFGKWYLYGGCT 106
Query: 174 ----VKKDIASALWCFHRASEKGHAGA 196
+++ A+ F RASE GHA A
Sbjct: 107 GGSVTEENYTKAVHWFKRASELGHAEA 133
>gi|257486713|ref|ZP_05640754.1| hypothetical protein PsyrptA_25785 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 429
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR----VEN 136
A+N + A+Y L +H +A G + ++A G+ DA+Y +G + E
Sbjct: 117 AENGDPVAQYKLGLIHFYGRGVDIDRAKGLQWVTESAERGNADAEYFMGTAITAGVATET 176
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
D+ Q+ + + KA +Q H A L ++Y G V+KD A RAS +G A A
Sbjct: 177 DFGQAAR----WFSKAAEQGHVKAQQKLASLYFNGGGVEKDDQEAFKWASRASAQGDAEA 232
Query: 197 AIAYGSLLL--RGVQV-PECLTKL 217
+ +L +G QV P+ KL
Sbjct: 233 KLLLATLYFYGKGTQVDPQHAVKL 256
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GDP AQY+LG + V D+ + ++ ++ ++ + A Y +GT G
Sbjct: 116 AAENGDPVAQYKLGL-IHFYGRGVDIDRAKGLQWVTESAERGNADAEYFMGTAITAGVAT 174
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ D A F +A+E+GH A SL G V
Sbjct: 175 ETDFGQAARWFSKAAEQGHVKAQQKLASLYFNGGGV 210
>gi|195573228|ref|XP_002104597.1| GD18357 [Drosophila simulans]
gi|194200524|gb|EDX14100.1| GD18357 [Drosophila simulans]
Length = 818
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 80/195 (41%), Gaps = 17/195 (8%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELG 129
A E F++A A N+ A +L KL+L+ A AA MGDP Q LG
Sbjct: 357 ALEYFKMAATAGNAVGFA--FLGKLYLEGSEQIKADNDAAFGYFSKAAEMGDPVGQSGLG 414
Query: 130 CR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
L V D ++ A Y +A DQ LG +Y TG+ VK D A F
Sbjct: 415 LMYLKGLGVPKDSIK----ALSYFTQAADQGWVDGQLQLGNMYFTGNGVKIDYKLAFKYF 470
Query: 186 HRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNP 239
+ A++ GH G AYG +LR K ++R + + N
Sbjct: 471 NLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMMAYSDYKNNR 530
Query: 240 VEKAKEQFEVAAQAG 254
+++A Q+ + A+ G
Sbjct: 531 IDEAYMQYSLMAEMG 545
>gi|21355295|ref|NP_651179.1| Hrd3, isoform A [Drosophila melanogaster]
gi|442620694|ref|NP_001262882.1| Hrd3, isoform B [Drosophila melanogaster]
gi|5901858|gb|AAD55437.1|AF181652_1 BcDNA.LD23587 [Drosophila melanogaster]
gi|7301042|gb|AAF56178.1| Hrd3, isoform A [Drosophila melanogaster]
gi|220943828|gb|ACL84457.1| CG10221-PA [synthetic construct]
gi|440217802|gb|AGB96262.1| Hrd3, isoform B [Drosophila melanogaster]
Length = 819
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 116 AANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA MGDP Q LG L V D ++ A Y +A DQ LG +Y TG
Sbjct: 401 AAEMGDPVGQSGLGLMYLKGLGVPKDSIK----ALSYFTQAADQGWVDGQLQLGNMYFTG 456
Query: 172 DCVKKDIASALWCFHRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAA 225
+ VK D A F+ A++ GH G AYG +LR K ++R +
Sbjct: 457 NGVKTDYKLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWS 516
Query: 226 KKARANLESNLMNPVEKAKEQFEVAAQAG 254
+ N +++A Q+ + A+ G
Sbjct: 517 SRLMMAYSDYKNNRIDEAYMQYSLMAEMG 545
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCV 174
A+ GD +Q LG + D Q+A Y + A D + LG +YL G D +
Sbjct: 328 ADKGDIQSQVGLGQVYYQGGKVTEQDHQKALEYFKMAADAGSAVGIAFLGKLYLEGSDQI 387
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ D +A F +A+E G G + L+G+ VP+
Sbjct: 388 RADNDAAFGYFSKAAEMGDPVGQSGLGLMYLKGLGVPK 425
>gi|414170170|ref|ZP_11425784.1| hypothetical protein HMPREF9696_03639 [Afipia clevelandensis ATCC
49720]
gi|410884842|gb|EKS32662.1| hypothetical protein HMPREF9696_03639 [Afipia clevelandensis ATCC
49720]
Length = 412
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L++ AA DP Q+ + L + + A +++K+ DQ H A Y LG L
Sbjct: 157 SLMMKAAEENDPVGQFGVAYMLTFGQGTQRDPKAAIPWLQKSADQGHADAQYALGLELLK 216
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G+ KKD A A F +A+ +G+A + +A ++ G+ V
Sbjct: 217 GESTKKDDARAHAWFVKAANQGNANSMLALSNMYADGLVV 256
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L +A+ G DAQY LG L + D +A + KA +Q + ++ L +Y G
Sbjct: 195 LQKSADQGHADAQYALGLELLKGESTKKDDARAHAWFVKAANQGNANSMLALSNMYADGL 254
Query: 173 CVKKDIASALWCFHRASEKGH 193
V KD A+ H+A+E G+
Sbjct: 255 VVSKDEKEAIVWLHKAAEAGN 275
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 130 CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRAS 189
R +E D D +AF + KA ++ P + + + G ++D +A+ +++
Sbjct: 144 ARTGIERD----DAKAFSLMMKAAEENDPVGQFGVAYMLTFGQGTQRDPKAAIPWLQKSA 199
Query: 190 EKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
++GHA A A G LL+G + + +A V AA + AN
Sbjct: 200 DQGHADAQYALGLELLKGESTKKDDARAHAWFVKAANQGNAN 241
>gi|380023934|ref|XP_003695764.1| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1-like [Apis
florea]
Length = 741
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ G+P A LG +D V+ D + A+ Y +KA + +P LG +YL G V
Sbjct: 374 AADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAAELGNPVGQSGLGLMYLYGRGV 433
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++D A AL F +A+E+G + G++ G V
Sbjct: 434 ERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGV 469
>gi|154498247|ref|ZP_02036625.1| hypothetical protein BACCAP_02235 [Bacteroides capillosus ATCC
29799]
gi|150272794|gb|EDM99962.1| Sel1 repeat protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 1017
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ LG LR +++A + KA +Q +P A LG Y GD +
Sbjct: 621 AAEQGYPRAQSLLGSCLRDGMGTQPDEKEAVKWYTKAAEQGYPPAQCSLGLCYENGDGTQ 680
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A + RA+++G+A A L G+ VPE
Sbjct: 681 QDPVRAAELYRRAADQGYAPAQCNLAVCYLNGIGVPE 717
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 61 DRRLIPLL----------KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGAC----- 105
++R IP L E+ E A+E + Y ++ +L Y A
Sbjct: 227 EKRYIPALCDLGLCYESGSGVDEDLEKAVECYTQSAEEGYAPAQCNLGYCYLAAIGVEQD 286
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLL 164
A A L +A P A +GC L + V+ D ++A Y + +Q +P AL L
Sbjct: 287 DAKAAEWLAKSAEQEYPRALRLMGC-LYQDGRGVEKDLEKAAEYYRRGAEQNYPPALCDL 345
Query: 165 GTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G Y TG+ V+KD + R+ E +A A G LL G+ V
Sbjct: 346 GLCYETGEGVEKDEKKGAELYRRSGELDYAPAQCNLGFCLLNGIGV 391
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+++++A ++++A +Q +P A+ +LG G V+KD A++ C+ RA++ G+ A A
Sbjct: 393 KNEEEAVAWLKRAAEQDYPRAISILGDCLGEGTGVEKDEAASAACYQRAADLGYVPAQCA 452
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G G V + A AA++ A + NL
Sbjct: 453 LGLCYETGGGVERDEKQAVAWYTRAAEQGYAPAQCNL 489
>gi|354593906|ref|ZP_09011949.1| hypothetical protein CIN_06450 [Commensalibacter intestini A911]
gi|353673017|gb|EHD14713.1| hypothetical protein CIN_06450 [Commensalibacter intestini A911]
Length = 242
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N A++ L +++ K + AA+ GD ++Y+LG + Q
Sbjct: 80 ADQRNVDAQFQLGEMYFKGQGVPQNYDIAGDFYTQAADQGDVTSEYKLGEMYLIGQGSSQ 139
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
A Y KA Q H A Y G +Y G + K+ + AL F ++S + +A A +
Sbjct: 140 DYPSALVYFTKAGKQGHKIAQYKAGEMYYNGQGMSKNYSKALKWFAKSSHQKYAPAQVMI 199
Query: 201 GSLLLRGVQV 210
G + G V
Sbjct: 200 GKMYQAGQGV 209
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
++A Y+ KA DQ + + LG +Y G V KD A +++A+++ + A G
Sbjct: 34 KKALYWYTKAADQGDDTSQFQLGEMYYNGQGVPKDYKKAAEWYNKAADQRNVDAQFQLGE 93
Query: 203 LLLRGVQVPE 212
+ +G VP+
Sbjct: 94 MYFKGQGVPQ 103
>gi|323491312|ref|ZP_08096497.1| hypothetical protein VIBR0546_12802 [Vibrio brasiliensis LMG 20546]
gi|323314438|gb|EGA67517.1| hypothetical protein VIBR0546_12802 [Vibrio brasiliensis LMG 20546]
Length = 341
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L +A + AQ EL R R + SD +AFY+ ++A + + A LG YL G
Sbjct: 23 LTQSAQNNNVHAQLELAERYRQGDGVELSDSEAFYWYQQAAENGNQSAAIHLGQAYLKGK 82
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K DI +A++ ++A+ A AA+ G L Q P L
Sbjct: 83 GTKVDIENAIFWLNKAALSDDAQAALLLGQLYESLKQQPSNL 124
>gi|212709887|ref|ZP_03318015.1| hypothetical protein PROVALCAL_00936 [Providencia alcalifaciens DSM
30120]
gi|422018620|ref|ZP_16365177.1| hypothetical protein OO9_07962 [Providencia alcalifaciens Dmel2]
gi|212687698|gb|EEB47226.1| hypothetical protein PROVALCAL_00936 [Providencia alcalifaciens DSM
30120]
gi|414104912|gb|EKT66477.1| hypothetical protein OO9_07962 [Providencia alcalifaciens Dmel2]
Length = 200
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AAN G+ DAQ LG + + + V SD + A+ +IEK+ ++ +P AL +G Y G
Sbjct: 67 LTMAANKGNADAQLFLG-DMYLNGNGVPSDFETAYSWIEKSANKGNPEALNYMGQFYYQG 125
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
VK++ A F +A++K A G +L G
Sbjct: 126 AGVKQNYLIAFEWFQKAADKKFPPAQYQVGKMLQNG 161
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD AQ LG V N+ Q +A ++ A ++ + A LG +YL G+ V
Sbjct: 35 AQKGDVKAQVMLGIGYYVGNEIKQDYPKAKKWLTMAANKGNADAQLFLGDMYLNGNGVPS 94
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D +A +++ KG+ A G +G V
Sbjct: 95 DFETAYSWIEKSANKGNPEALNYMGQFYYQGAGV 128
>gi|149178612|ref|ZP_01857198.1| hypothetical protein PM8797T_07352 [Planctomyces maris DSM 8797]
gi|148842538|gb|EDL56915.1| hypothetical protein PM8797T_07352 [Planctomyces maris DSM 8797]
Length = 265
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G AQ+ +G R Q +QA + KA +Q + A Y LG +Y G+ VK
Sbjct: 138 SAEQGFDAAQFNIGAMYRDGEGVKQDYRQALEWFRKAAEQQNADAQYNLGFMYYKGEGVK 197
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D+ +L F +++E+G A G + G V +
Sbjct: 198 QDLKQSLEWFRKSAEQGETDAQYNLGIMYANGKGVKQ 234
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA + DAQY LG Q +Q+ + K+ +Q A Y LG +Y G VK
Sbjct: 174 AAEQQNADAQYNLGFMYYKGEGVKQDLKQSLEWFRKSAEQGETDAQYNLGIMYANGKGVK 233
Query: 176 KDIASALWCFHRASEKGH 193
+D A+ F +A+ +GH
Sbjct: 234 QDYNQAVAWFRKAASQGH 251
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD Q LG Q +A + +KA Q + Y +GT+YL G+ VK
Sbjct: 66 AAESGDAMEQSNLGVLYANGVGVEQDPFKAMEWYQKAAKQGNRVGQYHIGTMYLNGEGVK 125
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ F +++E+G A G++ G V + + AA++ A+ + N
Sbjct: 126 QDHNQAIEWFRKSAEQGFDAAQFNIGAMYRDGEGVKQDYRQALEWFRKAAEQQNADAQYN 185
Query: 236 L 236
L
Sbjct: 186 L 186
>gi|147667646|gb|ABQ45789.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+A A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYAK 156
>gi|227540134|ref|ZP_03970183.1| Sel1 domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227239995|gb|EEI90010.1| Sel1 domain protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 828
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
+E+A A+ +N +A Y L K +L ++ AAN GD +Q+ G L
Sbjct: 700 YEIA--ANKNNKNAMYRLGKCYLSGTGTRKNESQAYHWFATAANYGDIPSQFNAGLLLLK 757
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
N + ++ I +A +Q H A + LG YL GD V++ ++ + A+E GH
Sbjct: 758 GNGVAVNKEEGIKLIRQAAEQNHAAAQFELGNCYLMGDGVEESEEQTMYWYELAAENGHE 817
Query: 195 GA 196
A
Sbjct: 818 KA 819
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+AF Y E A ++ + A+Y LG YL+G +K+ + A F A+ G + G L
Sbjct: 695 EAFKYYEIAANKNNKNAMYRLGKCYLSGTGTRKNESQAYHWFATAANYGDIPSQFNAGLL 754
Query: 204 LLRGVQVPECLTKLNAKRV--SAAKKARANLESNLMN------PVEKAKEQ----FEVAA 251
LL+G V + K ++ AA++ A + L N VE+++EQ +E+AA
Sbjct: 755 LLKGNGV--AVNKEEGIKLIRQAAEQNHAAAQFELGNCYLMGDGVEESEEQTMYWYELAA 812
Query: 252 QAG 254
+ G
Sbjct: 813 ENG 815
>gi|450185301|ref|ZP_21889018.1| Sel1 domain-containing protein [Escherichia coli SEPT362]
gi|449325274|gb|EMD15186.1| Sel1 domain-containing protein [Escherichia coli SEPT362]
Length = 336
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A+ GD AQ++L R ++ +QS + A Y+ A Q A Y LG +Y G V +
Sbjct: 47 ADKGDATAQFKLAELYRSGSEGIQSYKDAVYWYSLAAKQGLTEAQYNLGVMYAHGYGVSQ 106
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+ A C+ A+EKG A G L +G V K A AA ++NL
Sbjct: 107 NYEKAFECYQMAAEKGFPEAQGNLGVLYSKGSGVIRDYGKAIAWLNKAANSGLVTAQTNL 166
Query: 237 ------MNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
N + A + + +AA+ G + L R+ E
Sbjct: 167 ALLYDETNKKDLADKWYRIAAEQGDKVAQYHLGRLYYE 204
>gi|325267702|ref|ZP_08134353.1| Sel1 repeat protein [Kingella denitrificans ATCC 33394]
gi|324980826|gb|EGC16487.1| Sel1 repeat protein [Kingella denitrificans ATCC 33394]
Length = 321
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG + Q +A + +AV+Q A LG +Y G V+
Sbjct: 121 AAEQGHAEAQYNLGVMYDNGDGVRQDYAEALKWYRQAVEQGVAQAKNNLGVMYAKGRGVR 180
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A AL + +A+E+G+A A G++ G V + T+ AA++ A + N
Sbjct: 181 KDDAEALRWYRQAAEQGYAEAQFNLGAMYATGRGVRQDYTEAGKWFRQAAEQGYAAAQYN 240
Query: 236 L 236
L
Sbjct: 241 L 241
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 74 NFELALE-ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGC 130
+F L+ A+ N A+Y L ++ Y+ G + A+ AA G +AQ+ LG
Sbjct: 42 DFRQTLQLAEQGNAEAQYNLGWMY--YNGQGVRQDYAEAVKWYRQAAEQGVAEAQFSLGL 99
Query: 131 RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
Q +AF + +A +Q H A Y LG +Y GD V++D A AL + +A E
Sbjct: 100 MYDNGQGVRQDYAEAFRWYRQAAEQGHAEAQYNLGVMYDNGDGVRQDYAEALKWYRQAVE 159
Query: 191 KGHAGAAIAYGSLLLRGVQV 210
+G A A G + +G V
Sbjct: 160 QGVAQAKNNLGVMYAKGRGV 179
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ+ LG Q +A + +A +Q + A Y LG +Y TG V
Sbjct: 193 AAEQGYAEAQFNLGAMYATGRGVRQDYTEAGKWFRQAAEQGYAAAQYNLGAMYATGYGVS 252
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
++ A A+ + +A+E+G+A A G++ G V + L
Sbjct: 253 QNDAEAIRWYRQAAEQGYAAAQYNLGAMYFTGRGVRQDL 291
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
D +A + +A +Q + A + LG +Y TG V++D A F +A+E+G+A A
Sbjct: 182 DDAEALRWYRQAAEQGYAEAQFNLGAMYATGRGVRQDYTEAGKWFRQAAEQGYAAAQYNL 241
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G++ G V + + AA++ A + NL
Sbjct: 242 GAMYATGYGVSQNDAEAIRWYRQAAEQGYAAAQYNL 277
>gi|373951150|ref|ZP_09611111.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
OS183]
gi|386323031|ref|YP_006019148.1| Sel1 domain-containing protein repeat-containing protein
[Shewanella baltica BA175]
gi|333817176|gb|AEG09842.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
BA175]
gi|373887750|gb|EHQ16642.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
OS183]
Length = 511
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 48/112 (42%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
M A L A GD QYELG + QA + EKA Q HP A Y LG +
Sbjct: 127 MLEAQLKPNAEAGDATFQYELGLLYERQPLLDPDATQAINWFEKAAAQQHPDADYHLGAL 186
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
Y V D A A F +A+ G A G++LL G P+ + + A
Sbjct: 187 YWHDKRVTSDFAKARQYFEKAAANGDELAKEHLGNMLLAGQGGPKDVARAEA 238
>gi|309751055|gb|ADO81039.1| Putative TPR repeat protein [Haemophilus influenzae R2866]
Length = 219
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A GD + Q+ LG Q D +A + KA +Q H A + LG +Y G
Sbjct: 51 LWLPMAEQGDANVQFNLGVMYAKGQGVKQDDFEAVKWYRKAAEQGHAKAQFNLGVMYAKG 110
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
VK+D A+ + +A+E+G+A A GS G V
Sbjct: 111 QGVKQDDFKAVKWYRKAAEQGYADAQANLGSAYSAGRGV 149
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
P+ Q++ G ++DY Q AF +Q + LG +Y G VK+D A
Sbjct: 29 PEQQFQQGSTAYEQSDY----QTAFKLWLPMAEQGDANVQFNLGVMYAKGQGVKQDDFEA 84
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+ + +A+E+GHA A G + +G V + K AA++ A+ ++NL
Sbjct: 85 VKWYRKAAEQGHAKAQFNLGVMYAKGQGVKQDDFKAVKWYRKAAEQGYADAQANL 139
>gi|424915620|ref|ZP_18338984.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392851796|gb|EJB04317.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 1261
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + + DQ QA + + + D+ A Y LG++Y G
Sbjct: 982 LADAAQGGDALALFEIGARYSDGRNGIAVDQKQAAGWYQLSADKGFAPAQYRLGSMYEKG 1041
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DIA A + +A+ +G+A A A+ Y S
Sbjct: 1042 NGVERDIAKAKGFYEQAANQGNASAMHNLAVLYAS 1076
>gi|344925543|ref|ZP_08779004.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 856
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ Q++LG V ++ ++AF + +A +Q H + Y +G + G V
Sbjct: 726 AAKQGNIACQHDLGHYYDVGQGVTKNLRKAFKWYMRAAEQGHSESQYNVGICFYEGQGVT 785
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK-LNAKRVSAAKK-ARAN-- 231
+D A+ + RA+E+G + A G + G VP L + L R++AAK+ RA
Sbjct: 786 RDHHEAVKWYRRAAEQGDSDAYCELGHCYIYGHGVPRDLAEALKYYRMAAAKRNYRATRI 845
Query: 232 ---LESNLMNP 239
LE+ +NP
Sbjct: 846 VLRLEAGEINP 856
>gi|149191236|ref|ZP_01869492.1| Sel1-like repeat [Vibrio shilonii AK1]
gi|148834906|gb|EDL51887.1| Sel1-like repeat [Vibrio shilonii AK1]
Length = 259
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A GD AQ ELG R N ++D +A + KA Q A+Y LG +Y G V
Sbjct: 37 GAKQGDLFAQIELGDRYADGNGVKENDAKAVEWYHKAAKQGSESAMYKLGMMYDNGHGVN 96
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
D A F +AS+KG A + G VP+ +K
Sbjct: 97 YDAKEAASWFEKASQKGSVQAQYYLAGMYKWGRGVPKSNSK 137
>gi|374263637|ref|ZP_09622185.1| hypothetical protein LDG_8638 [Legionella drancourtii LLAP12]
gi|363536227|gb|EHL29673.1| hypothetical protein LDG_8638 [Legionella drancourtii LLAP12]
Length = 1198
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+ + A +GD AQ+E+G + Q+D A + + A+ Q H GA Y LG +YL
Sbjct: 487 MYNRAILGDAQAQFEIGQMFQYGIGVTQNDASAIVFYQNAIQQQHLGAEYNLGILYLLHA 546
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
K+D AL A+ KG+ + +L +G+ PE + A
Sbjct: 547 KGKEDYKLALNDLTDAAFKGNKKSQYVLARILEQGITGPEGTEYIKA 593
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L +DAAN +A +LG + + +Q+A ++ +KA D + ALY LG + T
Sbjct: 954 SLFIDAANKNVHEAMNQLGGIYFMGLGQARDEQKALFWYKKAADLGNSNALYELGLLSET 1013
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G K D + AL + A++KG+ A +A + G+ V
Sbjct: 1014 GVTTKLDFSEALKYYQAAADKGNEKAMLALARMYHYGLGV 1053
>gi|168334657|ref|ZP_02692802.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 721
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G L AA G AQY + R + Q + +A+ + EKA Q H ++Y LG +Y
Sbjct: 301 GIDWLRTAAENGYVYAQYHMALRYAAGDGIEQDEHKAWEWFEKAAAQGHAKSIYKLGKIY 360
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V+KD A C+ + ++K + A G + G V + TK
Sbjct: 361 TDGIIVEKDYEKAFNCYLQLAQKSNKDAQYKVGIAYMYGNGVEKDSTK 408
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQ +G Q D +AF + KA Q A + LG Y G V
Sbjct: 452 AADQGYLFAQNNVGVAYEKGLGVKQDDDEAFAWYMKAALQNGVEAQFNLGICYEKGIGVL 511
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
+++ A + +A+++G+ A I G L G+ V + + A AAK
Sbjct: 512 QNLYGAFEWYSKAAKQGYVAAQIKIGDLYFDGLGVMQNFYEAFAWYAKAAK 562
>gi|145633269|ref|ZP_01789000.1| hypothetical protein CGSHi3655_03531 [Haemophilus influenzae 3655]
gi|144986115|gb|EDJ92705.1| hypothetical protein CGSHi3655_03531 [Haemophilus influenzae 3655]
Length = 216
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 120 GDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
GD AQ LG + DYV++ + + KA DQ AL LG +Y G V+
Sbjct: 58 GDSTAQLFLGVMYYNGEFFKQDYVEAAK----WYRKAADQGEEFALLFLGEMYEEGKGVE 113
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
KD A A+ + +A+E+G A A GS+ G V E
Sbjct: 114 KDYAEAIKLYRKAAEQGSASGQTALGSMYRFGKGVEE 150
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
VE DY + A KA +Q LG++Y G V++D A AL +++A+E+GH
Sbjct: 112 VEKDYAE----AIKLYRKAAEQGSASGQTALGSMYRFGKGVEEDYAEALKWYNKAAEQGH 167
Query: 194 AGAAIAYGSLLLRGVQVPECLTK 216
A G + GV V + K
Sbjct: 168 NQAQFYLGEMYANGVGVKQNQVK 190
>gi|195953500|ref|YP_002121790.1| Sel1 domain-containing protein repeat-containing protein
[Hydrogenobaculum sp. Y04AAS1]
gi|195933112|gb|ACG57812.1| Sel1 domain protein repeat-containing protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 343
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 34/194 (17%)
Query: 56 YCELNDRRLIPLLK-TAKENFELA-----------LEADNSNTHARYWLSKLHLKYHVPG 103
Y + N ++ +PL K +AK+ + A L + A YW K
Sbjct: 46 YKDKNYQKALPLFKESAKQGYAPAEAKLGYMYLRGLGVSRDDDKAAYWFKK--------- 96
Query: 104 ACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALY 162
AA+ G+ + LG V D Q+A Y+I+KAV Q
Sbjct: 97 ------------AAHQGNARGEVGLGYMYLFGKGGVSKDYQKALYWIKKAVKQGDARGEN 144
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV 222
LG +Y G V +D + A++ + +A+E+G A A + G + G+ VP+ +K
Sbjct: 145 NLGYMYEYGLGVPQDYSKAVYWYKKAAEQGLAAAEDSLGYMYEYGLGVPQDYSKAVYWYK 204
Query: 223 SAAKKARANLESNL 236
AA++ A E NL
Sbjct: 205 KAAEQGLAAAEDNL 218
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCVKKDIASALWC 184
YE G L V DY +A Y+ +KA +Q A LG +YL G V KD AL+
Sbjct: 186 YEYG--LGVPQDY----SKAVYWYKKAAEQGLAAAEDNLGYMYLFGKGGVSKDYQKALYW 239
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAK 244
+A+ +G A G + G+ VP+ +K AAK+ A E+NL +
Sbjct: 240 IKKAAHQGDALGEATLGHMYAEGLGVPQDYSKALYWFKKAAKQGLAQAENNLGYMYAEG- 298
Query: 245 EQFEVAAQAGCNLGLRWLQRIEEE 268
+ N + WLQ+ E+
Sbjct: 299 ----LGVPQDYNEAVYWLQKAAEQ 318
>gi|373466692|ref|ZP_09558003.1| Sel1 repeat protein [Haemophilus sp. oral taxon 851 str. F0397]
gi|371759950|gb|EHO48655.1| Sel1 repeat protein [Haemophilus sp. oral taxon 851 str. F0397]
Length = 216
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
GD AQ LG + Q +A + KA DQ AL LG +Y G V+KD A
Sbjct: 58 GDSTAQLFLGVMYYNGEFFKQDYVEAAKWYRKAADQGEEFALLFLGEMYEEGKGVEKDYA 117
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
A+ + +A+E+G A A GS+ G V E
Sbjct: 118 EAVKLYRKAAEQGSASGQTALGSMYRFGKGVEE 150
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
VE DY + A KA +Q LG++Y G V++D A AL +++A+E+GH
Sbjct: 112 VEKDYAE----AVKLYRKAAEQGSASGQTALGSMYRFGKGVEEDYAEALKWYNKAAEQGH 167
Query: 194 AGAAIAYGSLLLRGVQVPECLTK 216
A G + GV V + K
Sbjct: 168 NQAQFYLGEMYANGVGVKQNQVK 190
>gi|169825777|ref|YP_001695935.1| hypothetical protein Bsph_0171 [Lysinibacillus sphaericus C3-41]
gi|168990265|gb|ACA37805.1| Hypothetical ybeQ protein [Lysinibacillus sphaericus C3-41]
Length = 434
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
D DAQY+LG + +++ + E A Q + A Y+LG Y G V+++
Sbjct: 168 DTDAQYQLGEYYNAKEGNCFQPEKSLKWFELAAAQGNADAQYVLGNFYFEGVGVEENYTQ 227
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
A + RA+ +GHA AA + G VP T
Sbjct: 228 AFSLYERAALQGHADAANNLADMYFNGEGVPLDFT 262
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 21/165 (12%)
Query: 52 RVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAA 111
+++D +L+ +I L K A E+ +T A+Y L + + G C +
Sbjct: 144 KILDEEDLDHEVMIDLYKEAVED---------QDTDAQYQLGEYYNA--KEGNCFQPEKS 192
Query: 112 L--LVDAANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
L AA G+ DAQY LG + VE +Y Q AF E+A Q H A L
Sbjct: 193 LKWFELAAAQGNADAQYVLGNFYFEGVGVEENYTQ----AFSLYERAALQGHADAANNLA 248
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+Y G+ V D A F A+ K A A G + +G+ V
Sbjct: 249 DMYFNGEGVPLDFTLARKWFDFAASKNVAEAMFTLGIIYEQGLGV 293
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 116 AANMGDPDAQYELG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+A G +AQY LG L D + + ++ E+A +Q H A Y LG ++ G
Sbjct: 307 SAEAGYVEAQYRLGGIYLEGRLDQAKDINRGLFWYERAAEQFHIDAFYDLGFIWSKGLTG 366
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
++I + F +A+ +G A A + G + G + L
Sbjct: 367 IRNIEKGIHWFKQAALQGDADAKLQLGHIYNNGEGIARNL 406
>gi|420491251|ref|ZP_14989831.1| cysteine-rich protein X [Helicobacter pylori Hp P-13]
gi|393105291|gb|EJC05840.1| cysteine-rich protein X [Helicobacter pylori Hp P-13]
Length = 256
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDMPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA--RANLESNLM 237
A I G + + G+ VP AK + +KA + N+E+ ++
Sbjct: 134 TNAYINLGIMYMEGMGVPSNY----AKAIECFRKAMHKGNVEAYIL 175
>gi|349610784|ref|ZP_08890111.1| hypothetical protein HMPREF1028_02086 [Neisseria sp. GT4A_CT1]
gi|348615783|gb|EGY65293.1| hypothetical protein HMPREF1028_02086 [Neisseria sp. GT4A_CT1]
Length = 305
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 74 NF-ELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDAANMGDPDAQYELGC 130
NF E LEA N +++ L ++ Y GA K A AA GD DAQ LG
Sbjct: 26 NFAETELEAKQGNAASQFNLGLMY--YSGKGAPKDYKQAEHWFRRAAEQGDVDAQTNLGG 83
Query: 131 RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
VQ ++A Y+ +KA Q A Y LG +Y G +++D A + +A++
Sbjct: 84 LYYQGKGVVQDYKKAKYWFQKAAAQGFAKAQYDLGLIYFLGKGIEQDYGQAAQWYEKAAK 143
Query: 191 KGHAGA----AIAYGSLLLRGVQVPE 212
+G+ A AI Y + L G + PE
Sbjct: 144 QGYLDAQYDLAIMYDNGLGVG-KAPE 168
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 116 AANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD AQY + R L V+ D+ +QA ++ +A DQ + A LG Y G
Sbjct: 177 AAEQGDNQAQYTVATRYMHGLGVQKDF----KQAVLWLHRAADQENIKAQLDLGVAYSHG 232
Query: 172 DCVKKDIASALWCFHRASEKG 192
V++D AL+ + +A+E+G
Sbjct: 233 FGVRQDDKQALYWYRKAAEQG 253
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY+L ++ ++AF + KA +Q A Y + T Y+ G V+
Sbjct: 141 AAKQGYLDAQYDLAIMYDNGLGVGKAPEKAFQWYRKAAEQGDNQAQYTVATRYMHGLGVQ 200
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
KD A+ HRA+++ + A + G G V +
Sbjct: 201 KDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQ 237
>gi|354594572|ref|ZP_09012611.1| hypothetical protein CIN_13070 [Commensalibacter intestini A911]
gi|353672248|gb|EHD13948.1| hypothetical protein CIN_13070 [Commensalibacter intestini A911]
Length = 150
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + AN GD Q LG + V D +A + EKA +Q A ++LG YL G
Sbjct: 25 LEEKANAGDTKIQIGLGFAYYSGDKGVPKDMNKAIEWFEKAANQGSKEAQFILGATYLDG 84
Query: 172 -DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
D + KD A F +A+++G A + GS+ +G V + K + AA +
Sbjct: 85 KDNIPKDYTKAREWFEKAADQGDAASQSNLGSIYAKGKGVEQDFHKASQWFEKAAAQGDD 144
Query: 231 NLESNL 236
E NL
Sbjct: 145 TAEYNL 150
>gi|82775914|ref|YP_402261.1| hypothetical protein SDY_0568 [Shigella dysenteriae Sd197]
gi|81240062|gb|ABB60772.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 327
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEQGDSEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 68
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 69 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 113
>gi|329901839|ref|ZP_08272928.1| hypothetical protein IMCC9480_3523 [Oxalobacteraceae bacterium
IMCC9480]
gi|327548987|gb|EGF33602.1| hypothetical protein IMCC9480_3523 [Oxalobacteraceae bacterium
IMCC9480]
Length = 270
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRV-ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
ALL AA GD A + LG D+ + +A + ++A D + A Y LG++Y
Sbjct: 118 ALLETAATQGDIVAAFNLGSICATGRKDFPKDIPRALKWYKQAADAGYASAQYNLGSLYA 177
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G V K++A A + F +++ +GHA + + G++ G+ + +
Sbjct: 178 QGTDVPKNLAKAAYWFDKSARQGHAKSQLDIGTMFAYGMGMEQ 220
>gi|209547818|ref|YP_002279735.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533574|gb|ACI53509.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 1260
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + + DQ QA + + + D+ A Y LG++Y G
Sbjct: 981 LADAAQGGDALALFEIGARYSDGRNGIAVDQKQAAGWYQLSADKGFAPAQYRLGSMYEKG 1040
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DIA A + +A+ +G+A A A+ Y S
Sbjct: 1041 NGVERDIAKAKGFYEQAANQGNASAMHNLAVLYAS 1075
>gi|424817157|ref|ZP_18242308.1| hypothetical protein ECD227_2274 [Escherichia fergusonii ECD227]
gi|325498177|gb|EGC96036.1| hypothetical protein ECD227_2274 [Escherichia fergusonii ECD227]
Length = 325
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ V S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDSEAQYIVGFYYNRDSA-VDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 67 SLGRKYSEDKSCHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|209695170|ref|YP_002263099.1| hypothetical protein VSAL_I1674 [Aliivibrio salmonicida LFI1238]
gi|208009122|emb|CAQ79359.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
Length = 338
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA + AQ+ LG + Q +QA Y+ +A Q HP + + LG +Y G K
Sbjct: 61 AAMQDNTTAQFNLGQIYKNGYGIAQDSKQAIYWFTRAATQNHPPSQFYLGEIYEYGLAGK 120
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLL 204
D+ +A + AS GH A + Y +L
Sbjct: 121 VDLYNASLWYQIASHNGHGEAMLGYKRVL 149
>gi|350269300|ref|YP_004880608.1| hypothetical protein OBV_09040 [Oscillibacter valericigenes
Sjm18-20]
gi|348594142|dbj|BAK98102.1| hypothetical protein OBV_09040 [Oscillibacter valericigenes
Sjm18-20]
Length = 577
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTV 167
AA+L+ A+ G+PDA Y G +L ++ + ++ D +A Y+ A + A+Y+LG +
Sbjct: 412 AAAMLLRIADDGNPDAAYAFG-KLFLQGNVIREDVPEAVRYLTAAAGGGNANAMYVLGKL 470
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGA 196
YL G+ V +D +AL F +++E+G+ A
Sbjct: 471 YLVGEDVSQDKKAALRWFTQSAEQGNTYA 499
>gi|39997985|ref|NP_953936.1| SEL1 repeat-containing protein [Geobacter sulfurreducens PCA]
gi|409913341|ref|YP_006891806.1| SEL1 repeat-containing protein [Geobacter sulfurreducens KN400]
gi|39984930|gb|AAR36286.1| SEL1 repeat-containing protein [Geobacter sulfurreducens PCA]
gi|298506926|gb|ADI85649.1| SEL1 repeat-containing protein [Geobacter sulfurreducens KN400]
Length = 245
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A+G L AA MG+ AQYE+ + + +A + +A +Q H A Y +
Sbjct: 147 ALGVKWLQQAAKMGNIRAQYEIATMYETGRELKKDISEAAKWYLRAAEQGHSRAQYTIAL 206
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
++L G+ V++D A A+ +A+E GH A + SL
Sbjct: 207 LFLKGEGVRQDRAEAVKWLRKAAEGGHTKAQMDLASL 243
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+++G Q ++++A + A Y + T+Y TG +K
Sbjct: 120 AAEQGMAIAQFKVGDMYYTGKGVKQDVALGVKWLQQAAKMGNIRAQYEIATMYETGRELK 179
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
KDI+ A + RA+E+GH+ A L L+G V +
Sbjct: 180 KDISEAAKWYLRAAEQGHSRAQYTIALLFLKGEGVRQ 216
>gi|127513631|ref|YP_001094828.1| Sel1 domain-containing protein [Shewanella loihica PV-4]
gi|126638926|gb|ABO24569.1| Sel1 domain protein repeat-containing protein [Shewanella loihica
PV-4]
Length = 693
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ GD AQY L L + + D +Q +Y++ AV+Q H A L +Y G V
Sbjct: 213 AADAGDASAQYNLAT-LYFDGIATEVDPKQGIHYLQLAVEQNHGSATGYLANMYDFGWFV 271
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++D A+ + RA+E G AG+ + + G VP+
Sbjct: 272 EQDKKLAIQLYQRAAELGDAGSMVNLATFFESGQFVPQ 309
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 74 NFELALEADN-----SNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
N EL LE N +NT A Y L ++ + +A + AA++G A +E+
Sbjct: 346 NTELGLELFNKAATMNNTQALYNLGIIYRDGNTVKRDRAKALSFFQQAADLGLERAYFEV 405
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + ++DQ A Y+ K+ + + A + LG +Y D ++ DI A+ F +A
Sbjct: 406 GKAYHLGLGTEKNDQLALPYLLKSANN-NSLATHYLGVIYYKSDLIEHDIDKAITYFEKA 464
Query: 189 SEKGHAGAAIAYGSLLLRG 207
+G + G + G
Sbjct: 465 YSQGEIDPTASLGQIYEFG 483
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
+LG N Q QQA Y+ E A+ Q A LG +Y G V++DI A+ +
Sbjct: 547 KLGNLFFFGNQIKQDYQQARYFYELALKQQDSTAANNLGEMYRLGLGVEQDIEQAISLYQ 606
Query: 187 RASE-KGHAGAAIAYGSLLLRGVQVP 211
A E G A A + L L G VP
Sbjct: 607 SAVEWHGQATAMLNLSELYLEGEGVP 632
>gi|56550940|ref|YP_161779.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542514|gb|AAV88668.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 585
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQ-LHPGALYLLGTVYLTGDC 173
AA +GDP A+Y + +N + D AFY++EK+ +Q HP A LG Y G
Sbjct: 255 AARLGDPFAEYNMARFYNPQNGSKRVDPDTAFYWMEKSANQGFHP-AESALGRFYRDGQG 313
Query: 174 VKKDIASALWCFHRASEKGH 193
KD+ A++ ++RA+E G+
Sbjct: 314 TGKDLQKAVFWYNRAAEGGN 333
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
+A G + A + G+P A+Y LG Q+ QA Y+IEK+ +Q +P A LLG
Sbjct: 55 QARGFMKMQQAVSGGNPKAEYNLGALYHEGLGTTQNFVQARYWIEKSAEQGYPAAEALLG 114
Query: 166 TVYLTG-DCVKKDIASALWCFHRASEKG 192
+Y G + +D+ A + +A+ G
Sbjct: 115 NIYHFGRKGIPEDLEKAFYWTEKAANHG 142
>gi|381394956|ref|ZP_09920667.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379329563|dbj|GAB55800.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 401
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAM--GAALLVDAANMGDPDAQY 126
K A + F+LA A+ + A+Y L ++ Y G K GA +A G +AQ
Sbjct: 97 KEAAKWFKLA--AEQGDASAQYNLGIMY--YSGQGVLKDFKEGAKWFKLSAEQGHANAQS 152
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
LG + +Q ++A + A +Q A ++LG +Y G V +D A+ F
Sbjct: 153 NLGLMYYFGDGVLQDSKEAAKWYRLAAEQGDASAQFVLGGIYYDGQGVIQDYKEAVKWFK 212
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKA 243
A+E+G A A A G + G V + + AA++ AN + NL N K
Sbjct: 213 LAAEQGDADAQYAIGLMYYSGDGVLQDSKEAAKWYRLAAEQGDANAQFNLGNMYAKG 269
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQY +G + +Q ++A + A +Q A + LG +Y GD V
Sbjct: 214 AAEQGDADAQYAIGLMYYSGDGVLQDSKEAAKWYRLAAEQGDANAQFNLGNMYAKGDGVL 273
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A + A+E+G A A G G V + + AA++ A+ + N
Sbjct: 274 KDSKEAAKWYRLAAEQGDAEAQSNLGLAYANGEGVIQDYKESAKWYRLAAEQGHADAQFN 333
Query: 236 LMN 238
L N
Sbjct: 334 LGN 336
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 95 LHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKA 152
L + HV + + + + L A GD +AQYELG +Q ++A + A
Sbjct: 11 LFFQIHVSASAEKENSVIEFLQQLAQDGDAEAQYELGNMYYFGEGVLQDSKEAAKWYRLA 70
Query: 153 VDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+Q + A + L +Y++G+ V +D A F A+E+G A A G + G V +
Sbjct: 71 SEQGNAEAQFNLALMYVSGEDVLQDSKEAAKWFKLAAEQGDASAQYNLGIMYYSGQGVLK 130
Query: 213 CLTKLNAKRVS-AAKKARANLESNL 236
K AK +A++ AN +SNL
Sbjct: 131 DF-KEGAKWFKLSAEQGHANAQSNL 154
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A+ G+ +AQ+ L D +Q ++A + + A +Q A Y LG +Y +G V
Sbjct: 70 ASEQGNAEAQFNLALMYVSGEDVLQDSKEAAKWFKLAAEQGDASAQYNLGIMYYSGQGVL 129
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD F ++E+GHA A G + G V
Sbjct: 130 KDFKEGAKWFKLSAEQGHANAQSNLGLMYYFGDGV 164
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +AQ+ LG + ++ ++A + A +Q A LG Y G+ V
Sbjct: 250 AAEQGDANAQFNLGNMYAKGDGVLKDSKEAAKWYRLAAEQGDAEAQSNLGLAYANGEGVI 309
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV-PECLTKLNAKRVSAAKKARANL 232
+D + + A+E+GHA A G++ G V + +T + +S A A L
Sbjct: 310 QDYKESAKWYRLAAEQGHADAQFNLGNMYADGEGVLKDFITSYSWANISRYNGADAKL 367
>gi|336452955|ref|YP_004607421.1| hypothetical protein HBZC1_07230 [Helicobacter bizzozeronii CIII-1]
gi|335332982|emb|CCB79709.1| hypothetical protein HBZC1_07230 [Helicobacter bizzozeronii CIII-1]
Length = 540
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 59 LNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDA 116
LN + ++ + A E F+ A+ A N YWL ++ K G K A +A
Sbjct: 179 LNGQGVVKDDEKAFEYFQGAVHA--GNIEGYYWLGYMYAK--GRGVAKDYEKAREYYQEA 234
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A+ G+ A Y LG + D V+ D ++A Y +KA + A LGT+Y G V
Sbjct: 235 ADTGNGMAYYALGW-MYARGDGVEKDYKKALEYYQKATNLGVADAYVDLGTIYANGHGVA 293
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
KD AL + +A++ G A + + GSL G V + K
Sbjct: 294 KDYKKALEYYQKAADAGVAESYVNLGSLYYEGKGVKKDYKK 334
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 25/156 (16%)
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
Y +KA D G Y LG +Y +G V KD AL F RA++ G A ++ G + L G
Sbjct: 122 YFQKAADMGDAGGHYFLGHMYFSGQGVSKDYFKALEHFQRATDMGDGRAYLSLGIMYLNG 181
Query: 208 VQVPECLTKLNAKRVSAAKKA--RANLES------------NLMNPVEKAKEQFEVAAQA 253
+ + K + K + A N+E + EKA+E ++ AA
Sbjct: 182 ----QGVVKDDEKAFEYFQGAVHAGNIEGYYWLGYMYAKGRGVAKDYEKAREYYQEAADT 237
Query: 254 GCNL---GLRWL----QRIEEEEKRLLTESSRIETL 282
G + L W+ +E++ K+ L + L
Sbjct: 238 GNGMAYYALGWMYARGDGVEKDYKKALEYYQKATNL 273
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 66/158 (41%), Gaps = 12/158 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ LG L + V+ D Q+A Y +KA + A LG +Y G V
Sbjct: 54 AANAGEAQGYAMLGT-LYADGQGVRQDYQKAATYYQKAGELGFASAYTGLGLIYANGHGV 112
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKL--NAKRVSAAKKARANL 232
KD A+ F +A++ G AG G + G V + K + +R + RA L
Sbjct: 113 AKDYKKAVAYFQKAADMGDAGGHYFLGHMYFSGQGVSKDYFKALEHFQRATDMGDGRAYL 172
Query: 233 ESNLM--------NPVEKAKEQFEVAAQAGCNLGLRWL 262
+M EKA E F+ A AG G WL
Sbjct: 173 SLGIMYLNGQGVVKDDEKAFEYFQGAVHAGNIEGYYWL 210
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 84/236 (35%), Gaps = 50/236 (21%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
AD + Y+L H+ + G K AL A +MGD A LG
Sbjct: 127 ADMGDAGGHYFLG--HMYFSGQGVSKDYFKALEHFQRATDMGDGRAYLSLGIMYLNGQGV 184
Query: 139 VQSDQQAFYYIEKAV------------------------------------DQLHPGALY 162
V+ D++AF Y + AV D + A Y
Sbjct: 185 VKDDEKAFEYFQGAVHAGNIEGYYWLGYMYAKGRGVAKDYEKAREYYQEAADTGNGMAYY 244
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV 222
LG +Y GD V+KD AL + +A+ G A A + G++ G V + K
Sbjct: 245 ALGWMYARGDGVEKDYKKALEYYQKATNLGVADAYVDLGTIYANGHGVAKDYKKALEYYQ 304
Query: 223 SAAKKARANLESNLMN----------PVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
AA A NL + +KA E F+ AA AG + L + E+
Sbjct: 305 KAADAGVAESYVNLGSLYYEGKGVKKDYKKALEYFQKAADAGIPIAFNNLGDLYEK 360
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 12/168 (7%)
Query: 54 IDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL- 112
+ Y R + + A+E ++ A AD N A Y L ++ + G K AL
Sbjct: 210 LGYMYAKGRGVAKDYEKAREYYQEA--ADTGNGMAYYALGWMYAR--GDGVEKDYKKALE 265
Query: 113 -LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
A N+G DA +LG + + ++A Y +KA D + LG++Y G
Sbjct: 266 YYQKATNLGVADAYVDLGTIYANGHGVAKDYKKALEYYQKAADAGVAESYVNLGSLYYEG 325
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAY---GSLLLRGVQVPECLTK 216
VKKD AL F +A++ AG IA+ G L +G V + K
Sbjct: 326 KGVKKDYKKALEYFQKAAD---AGIPIAFNNLGDLYEKGQGVKKDYKK 370
>gi|237748051|ref|ZP_04578531.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379413|gb|EEO29504.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 511
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 22/170 (12%)
Query: 48 KEVDRVIDYCELNDRRLIPLLKTAKEN-FELALEADNSNTHARYWLSKLHLKYHVPGACK 106
K+ + Y D + PL+++A N F + L D + A W K A K
Sbjct: 86 KKYIEALPYLNAPDAQKDPLVQSALGNMFSMGLGVDVNQEKAFDWYLK---------AAK 136
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A + A M + LG R ++D++AF + +KA +Q P A Y LGT
Sbjct: 137 QNNAMAQLYVAYM----LEKGLGVR--------KNDREAFNWYKKAAEQNVPNAQYKLGT 184
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+Y G + ++ AL + +A+E G +GA + G L G+ V T+
Sbjct: 185 LYEKGIGTRINLKEALNWYRKAAEGGLSGAQVKLGRLYSEGIGVKRDYTE 234
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 65/157 (41%), Gaps = 18/157 (11%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVP-----GACKAMGAALLVD----------AANM 119
FE L + A W SK K P G G +L D AA
Sbjct: 258 FENGLGVQQDDAFAISWYSKAAEKGFAPAQNNLGYLYDNGIGVLRDYTTARKWYEAAAKQ 317
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G+ +AQ+ LG + + VQ +A ++EKA + HP AL LG L G V D
Sbjct: 318 GNVEAQFNLGQLYTLGHGTVQDYGKAAEWLEKAAAKGHPKALNNLGMASLDGMGVPMDRV 377
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A F +A+ G+A A +L VQ P+ LTK
Sbjct: 378 KAGEYFRKAALLGNAHAQYNLATLY---VQHPDALTK 411
>gi|440226925|ref|YP_007334016.1| Sel1 domain-containing protein [Rhizobium tropici CIAT 899]
gi|440038436|gb|AGB71470.1| Sel1 domain-containing protein [Rhizobium tropici CIAT 899]
Length = 526
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G DAQY +G L V DY +QA + KA DQ P A Y LG +Y G
Sbjct: 258 AAIKGRADAQYAVGYSLANGIGVARDY----RQALQWYRKAADQGRPDAQYALGYMYENG 313
Query: 172 DCVKKDIASALWCFHRASEKGHAGA--AIAYGSLLLRGV 208
VK D SA+ + +A+E+G A A+AY RGV
Sbjct: 314 QGVKADDDSAVRWYRKAAEQGDAQGQYALAYMYAGGRGV 352
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Query: 91 WLSKLHLKYHVPG-ACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYI 149
WL+ H + PG A + V+ A G+P AQY LG R Q D QA +
Sbjct: 18 WLA--HAEDPAPGPANTTIDLKYWVEFAKQGNPAAQYGLGYRYANGQGVEQDDAQAVDWY 75
Query: 150 EKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA--AIAYGSLLLRG 207
K+ +Q + A Y L +Y +G V D+ A + RA++ G+A A AI Y RG
Sbjct: 76 RKSAEQGNAQAQYALAYMYASGRGVDTDLKQANDWYLRAAQAGNADAQYAIGYSYANGRG 135
Query: 208 VQVPE 212
+ V +
Sbjct: 136 MAVSD 140
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G PDAQY LG D A + KA +Q Y L +Y G V
Sbjct: 294 AADQGRPDAQYALGYMYENGQGVKADDDSAVRWYRKAAEQGDAQGQYALAYMYAGGRGVG 353
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A + +A+ +GHA A A G + G
Sbjct: 354 RDYGKAFDWYQKAASQGHADAQYALGYMYENG 385
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G PDA+Y +G + +QA + +KA +Q LY +G Y G V
Sbjct: 186 AADQGRPDAEYAIGYMYDNGQGAEEDQEQAVAWYKKAGNQGVAQGLYAVGYAYANGKGVT 245
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ A A + +A+ KG A A A G L G+ V + AA + R + +
Sbjct: 246 RNDAEAYSWYMKAAIKGRADAQYAVGYSLANGIGVARDYRQALQWYRKAADQGRPDAQYA 305
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
L E + +A + +RW ++ E+
Sbjct: 306 LGYMYENGQ-----GVKADDDSAVRWYRKAAEQ 333
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
Query: 116 AANMGDPDAQYEL-----GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
AA GD QY L G R V DY + AF + +KA Q H A Y LG +Y
Sbjct: 330 AAEQGDAQGQYALAYMYAGGR-GVGRDYGK----AFDWYQKAASQGHADAQYALGYMYEN 384
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G K D ++A + +A+++ + A L +G VP+ + A AA + A
Sbjct: 385 GQGTKADKSTAASWYRKAADQNNPQGEYALAYLYYQGAGVPKDYGQTAALFRKAADQGDA 444
Query: 231 NLESNL 236
E L
Sbjct: 445 RAEYGL 450
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQY +G SD+ A + +K+ Q A Y LG +Y G V
Sbjct: 114 AAQAGNADAQYAIGYSYANGRGMAVSDEDAVAWYQKSASQGQAQAQYALGYMYANGLGVH 173
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A AL + +A+++G A A G + G E
Sbjct: 174 QDEAIALGWYRKAADQGRPDAEYAIGYMYDNGQGAEE 210
>gi|261379338|ref|ZP_05983911.1| Sel1 repeat protein [Neisseria subflava NJ9703]
gi|284797777|gb|EFC53124.1| Sel1 repeat protein [Neisseria subflava NJ9703]
Length = 146
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 116 AANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD AQY + R L V+ D+ +QA ++ +A DQ + A LG Y G
Sbjct: 22 AAEQGDNQAQYTVATRYMHGLGVQKDF----KQAVLWLHRAADQENIKAQSDLGVAYHNG 77
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V++D AL+ + +A+E+G + A G + L+G V + +K+ AK KKA AN
Sbjct: 78 FGVRQDDKQALYWYRKAAEQGSSEAQYNLGVMYLKGQGVRQ--SKIVAKEWF--KKACAN 133
Query: 232 LESNLMNPVEK 242
+ + +K
Sbjct: 134 GDKQSCDAYQK 144
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLV--DAANMGDPDAQYELGCRLRVENDY 138
A+ + A+Y ++ ++ H G K A+L AA+ + AQ +LG
Sbjct: 23 AEQGDNQAQYTVATRYM--HGLGVQKDFKQAVLWLHRAADQENIKAQSDLGVAYHNGFGV 80
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
Q D+QA Y+ KA +Q A Y LG +YL G V++ A F +A G +
Sbjct: 81 RQDDKQALYWYRKAAEQGSSEAQYNLGVMYLKGQGVRQSKIVAKEWFKKACANGDKQSCD 140
Query: 199 AYGSL 203
AY L
Sbjct: 141 AYQKL 145
>gi|417547764|ref|ZP_12198846.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|417563991|ref|ZP_12214865.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|395555747|gb|EJG21748.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|400389513|gb|EJP52584.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
Length = 301
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L +A +G +A +LG R ND ++ D +A + E+ + +P A++ LG Y
Sbjct: 80 LFEKSAQLGSSNAMLQLGLIYRNGNDLIKKDDLKALKWFEQGAKKGNPSAIHNLGVSYYK 139
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G + +D A A F +++E G + + LL G V + K + AA +
Sbjct: 140 GLGITEDKAKAFKYFSQSAELGLLQSQVIVAGLLYNGEGVTKDHKKAFEWALKAANQGDV 199
Query: 231 NLESNL-----------MNPVEKAKEQFEVAAQAGCNLG 258
++N+ +PV AK+ FE AA G LG
Sbjct: 200 ESQNNIGLAYENGDGVAKDPV-LAKKWFEKAANNGSVLG 237
>gi|419798028|ref|ZP_14323471.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385696369|gb|EIG26858.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 305
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 74 NF-ELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDAANMGDPDAQYELGC 130
NF E LEA N +++ L ++ Y GA K A AA GD DAQ LG
Sbjct: 26 NFAETELEAKQGNAASQFNLGLMY--YSGKGAPKDYKQAEHWFRRAAEQGDVDAQTNLGG 83
Query: 131 RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
VQ ++A Y+ +KA Q A Y LG +Y G +++D A + +A++
Sbjct: 84 LYYQGKGVVQDYKKAKYWFQKAAAQGFAKAQYDLGLIYFLGKGIEQDYGQAAQWYEKAAK 143
Query: 191 KGHAGA----AIAYGSLLLRGVQVPE 212
+G+ A AI Y + L G + PE
Sbjct: 144 QGYLDAQYDLAIMYDNGLGVG-KAPE 168
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD AQY + R L V+ D+ +QA ++ +A DQ + A LG Y G
Sbjct: 177 AAEQGDNQAQYTVATRYMHGLGVQKDF----KQAVLWLHRAADQENIKAQLDLGVAYSHG 232
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V++D AL+ + +A+E+G+A A G + G V E
Sbjct: 233 FGVRQDDKQALYWYRKAAEQGNAEAQYNLGLMYEEGQGVSE 273
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY+L ++ ++AF + KA +Q A Y + T Y+ G V+
Sbjct: 141 AAKQGYLDAQYDLAIMYDNGLGVGKAPEKAFQWYRKAAEQGDNQAQYTVATRYMHGLGVQ 200
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ HRA+++ + A + G G V + + AA++ A + N
Sbjct: 201 KDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDKQALYWYRKAAEQGNAEAQYN 260
Query: 236 L 236
L
Sbjct: 261 L 261
>gi|421654930|ref|ZP_16095255.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408509684|gb|EKK11354.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 301
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L +A +G +A +LG R ND ++ D +A + E+ + +P A++ LG Y
Sbjct: 80 LFEKSAQLGSSNAMLQLGLIYRNGNDLIKKDDLKALKWFEQGAKKGNPSAIHNLGVSYYK 139
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G + +D A A F +++E G + + LL G V + K + AA +
Sbjct: 140 GLGITEDNAKAFKYFSQSAELGLLQSQVIVAGLLYNGEGVTKDHKKAFEWALKAANQGDV 199
Query: 231 NLESNL-----------MNPVEKAKEQFEVAAQAGCNLG 258
++N+ +PV AK+ FE AA G LG
Sbjct: 200 ESQNNIGLAYENGDGVAKDPV-LAKKWFEKAANNGSVLG 237
>gi|420471014|ref|ZP_14969719.1| cysteine-rich protein X [Helicobacter pylori Hp H-11]
gi|393084426|gb|EJB85118.1| cysteine-rich protein X [Helicobacter pylori Hp H-11]
Length = 256
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y+
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYM 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|288963182|ref|YP_003453461.1| hypothetical protein AZL_f01570 [Azospirillum sp. B510]
gi|288915434|dbj|BAI76917.1| hypothetical protein AZL_f01570 [Azospirillum sp. B510]
Length = 452
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+A + EKA Q H A+Y LG + G V +D A+A+ F +A+E GHA A + GSL
Sbjct: 144 EALSWYEKAAAQNHAEAIYHLGLFHTFGQGVPQDYAAAVPWFRKAAELGHATAQMKLGSL 203
Query: 204 LLRGVQVPECLTK 216
+G V + + +
Sbjct: 204 YAQGNGVAQDMAE 216
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G AQ +LG N Q +A + EK+ + + GA + LG + G V+
Sbjct: 188 AAELGHATAQMKLGSLYAQGNGVAQDMAEALSWYEKSAENGNAGAQFSLGLAWEHGQGVE 247
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D A + RA+E+ H A + G L G VP+
Sbjct: 248 PDAEKAAHWYRRAAEQDHPVAQLHLGLLYASGRGVPQ 284
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 100 HVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLH 157
H GA M AL AA +A Y LG Q A + KA + H
Sbjct: 134 HGLGAAPDMAEALSWYEKAAAQNHAEAIYHLGLFHTFGQGVPQDYAAAVPWFRKAAELGH 193
Query: 158 PGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG 201
A LG++Y G+ V +D+A AL + +++E G+AGA + G
Sbjct: 194 ATAQMKLGSLYAQGNGVAQDMAEALSWYEKSAENGNAGAQFSLG 237
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G+ AQ+ LG ++A ++ +A +Q HP A LG +Y +G V
Sbjct: 224 SAENGNAGAQFSLGLAWEHGQGVEPDAEKAAHWYRRAAEQDHPVAQLHLGLLYASGRGVP 283
Query: 176 KDIASAL-WCFHRASEKGHAGAAIAYGSLLLRGV 208
+D L WC ++EKG++ A G L RG+
Sbjct: 284 QDYRETLKWC-RLSAEKGNSSAQFNLGLLHARGL 316
>gi|156551291|ref|XP_001601284.1| PREDICTED: protein sel-1 homolog 1-like [Nasonia vitripennis]
Length = 774
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+AA+ G+P A LG +D V+ D A+ Y +KA + +P LG +YL G
Sbjct: 400 NAADAGNPVAMAFLGKIYLEGSDIVKQDNDTAYKYFKKAAELGNPVGQSGLGLMYLYGRG 459
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
V+KD A AL F +A+E+G + G++ G V
Sbjct: 460 VEKDPAKALHYFSQAAEQGWVDGQLQLGNMYFSGTGV 496
>gi|152999012|ref|YP_001364693.1| Sel1 domain-containing protein [Shewanella baltica OS185]
gi|151363630|gb|ABS06630.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
OS185]
Length = 511
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 49/112 (43%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
M A L A GD QYELG + + QA + EKA Q HP A Y LG +
Sbjct: 127 MLEAQLKPNAEAGDAAFQYELGLLYERQPLLDPNATQAIDWFEKAAAQQHPDADYHLGAL 186
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
Y V D A A F +A+ G A G++LL G P+ + + A
Sbjct: 187 YWHDKRVTSDFAKARQYFEKAAANGDELAKEHLGNMLLTGQGGPKDVARAEA 238
>gi|385763634|gb|AFI78465.1| Sel1 domain protein repeat-containing protein [uncultured bacterium
ws138B4]
Length = 165
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A G+ DAQ+ + + V+++ +AF ++ + DQ A + LG +Y+ G
Sbjct: 49 FLYPIAESGNADAQHRVAIMCQNGLGMVRNEARAFAMMKASADQGFALAQHGLGFMYMEG 108
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV---PECLTKLNAK 220
DCV+K+ A A+ F +A+++G AG+ + G V PE +L A+
Sbjct: 109 DCVEKNSAEAINWFRKAADQGLAGSLTTLAQMYEDGNGVERDPEEAKRLYAE 160
>gi|237748072|ref|ZP_04578552.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379434|gb|EEO29525.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 219
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 116 AANMGDPDAQYELGCRLRVEN-DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ +AQ +G + +E ++++ A+Y+ EKA A LGT+ + G
Sbjct: 95 AANGGNIEAQTFMGI-INLEGLGTPKNEKTAYYWFEKAARGGETSAQNYLGTLLMNGQGT 153
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K+D A A F +A+EKG A G++ +G V + + K
Sbjct: 154 KRDSAKAAEWFTKAAEKGDLNARKILGAMYFQGTGVAKDMVK 195
>gi|440799995|gb|ELR21038.1| Sel1 repeatcontaining protein [Acanthamoeba castellanii str. Neff]
Length = 810
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 15 ALGLLQSNQHQKRWLHSRNKKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKTAKEN 74
ALG+ ++ + RWL +K + + D + D + L+P+L
Sbjct: 477 ALGVAKNLREAIRWLLLAEEKGYDDVP---------DTMNDIIGDSAAALLPILTE---- 523
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
+A+ + +Y+LS+++ + P KA + AA G +A Y+LG L
Sbjct: 524 -----KAEEGSALGQYYLSQVYTRL-TPPDTKAS-SYWSERAAGQGHKEAMYDLGNLLLT 576
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
+ ++ ++ ++++A++ A+Y LG +Y G V +D A F RA+ G
Sbjct: 577 GDGVERNTEKGIAWLKRAIEAGSIDAIYRLGLLYYEGKEVGRDYRKAFKHFTRAANAGDV 636
Query: 195 GAAIAYGSLLLRGVQV 210
AA G + RG+ V
Sbjct: 637 TAAYRVGKMYARGIGV 652
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTV 167
G A L A G DA Y LG L E V D ++AF + +A + A Y +G +
Sbjct: 587 GIAWLKRAIEAGSIDAIYRLGL-LYYEGKEVGRDYRKAFKHFTRAANAGDVTAAYRVGKM 645
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
Y G V+++ A F RA+ +G GA A +L +GV VP
Sbjct: 646 YARGIGVEQNGKKAAKWFVRAAAQGQVGAFYAEAALYDQGVLVP 689
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%)
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
QY +G R ++ AF + KA DQ + ++ +G Y G V+++ A
Sbjct: 287 QYNVGWCYRYGCGVARNYDLAFRWYSKAADQHYSHGMFAVGKAYSKGWGVEQNPEKAFEW 346
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+ RA+E G A G RG P+ + K AA++ ++NL
Sbjct: 347 YTRAAEAGSGEAQCNLGCCYARGQGTPKDMEKARVWYAKAAEQGNVPAQANL 398
>gi|398941738|ref|ZP_10669904.1| Sel1 repeat protein [Pseudomonas sp. GM41(2012)]
gi|398161505|gb|EJM49736.1| Sel1 repeat protein [Pseudomonas sp. GM41(2012)]
Length = 184
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
N Q QA +KA D+ A Y LG Y G +D+ AL F +AS +GHA
Sbjct: 41 NTQPQDLAQALAACQKASDEGDAQAQYELGEFYYDGKNTPRDLKKALSYFEKASLQGHAQ 100
Query: 196 AAIAYGSLLLRGVQVP-ECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAG 254
A GS+ G VP + +++A A L++ + +E+ EVA Q
Sbjct: 101 AQFKLGSMFFHGEGVPANNIQAYIVLKMAAVNGAEEALDTADEVAEKMPREELEVATQVL 160
Query: 255 CNLGLRWLQRIEEEEKR 271
+ ++L ++ + R
Sbjct: 161 GQIFRKYLMELQSADGR 177
>gi|189501781|ref|YP_001957498.1| hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497222|gb|ACE05769.1| hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus
5a2]
Length = 2413
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ++LG + D QA ++ KA Q + A + LG +Y G V
Sbjct: 2258 AAEQGHADAQFKLGVMYHNGEGVAKDDNQAVFWYRKAAGQRNVKAQFKLGVMYYHGQGVG 2317
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + A+E+G+A A G + + V K AA++ A+ + N
Sbjct: 2318 QDYKKAIKWYQIAAEQGNADAQFNLGVMYEK---VEGNYKKAIEWYRIAAEQGNADAQFN 2374
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
L EK + ++ A + W Q+ E+
Sbjct: 2375 LGVIYEKVEGNYKKA--------IEWFQKAAEQ 2399
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
DAQ++LG + D QA + +KA +Q + A + LG +Y + V+ + A+
Sbjct: 2196 DAQFKLGVMYHNGEGVAKDDNQAIKWFQKAAEQGNADAQFNLGVMY---EKVEGNYKKAI 2252
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRG 207
F +A+E+GHA A G + G
Sbjct: 2253 KWFQKAAEQGHADAQFKLGVMYHNG 2277
>gi|15645731|ref|NP_207908.1| hypothetical protein HP1117 [Helicobacter pylori 26695]
gi|419417098|ref|ZP_13957586.1| hypothetical protein HP79_08972 [Helicobacter pylori P79]
gi|2314269|gb|AAD08161.1| conserved hypothetical secreted protein [Helicobacter pylori 26695]
gi|384373823|gb|EIE29273.1| hypothetical protein HP79_08972 [Helicobacter pylori P79]
Length = 256
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + +++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|145637537|ref|ZP_01793194.1| hypothetical protein CGSHiHH_04215 [Haemophilus influenzae PittHH]
gi|145269223|gb|EDK09169.1| hypothetical protein CGSHiHH_04215 [Haemophilus influenzae PittHH]
Length = 255
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 112 LLVDAANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L + A G+ AQY LG V+ DY + A + KA +Q + A + LG +
Sbjct: 51 LWLPLAEQGNAKAQYNLGVMYGNGRGVKQDYFK----AVNWYRKAAEQGYAKAQFNLGNM 106
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
Y G VK+D A+ F +A+E+GHA A G + +G V +
Sbjct: 107 YANGRGVKQDDFEAVNWFRKAAEQGHANAQFNLGVMYDKGQGVKQ 151
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ+ LG Q D +A + KA +Q H A + LG +Y G VK
Sbjct: 91 AAEQGYAKAQFNLGNMYANGRGVKQDDFEAVNWFRKAAEQGHANAQFNLGVMYDKGQGVK 150
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A+ + +A+E+G+A A G++ G V +
Sbjct: 151 QDDFEAVKWYRKAAEQGYAKAQGGLGAMYQSGRGVKQ 187
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 138 YVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
Y QS+ Q AF +Q + A Y LG +Y G VK+D A+ + +A+E+G+A A
Sbjct: 40 YEQSNYQTAFKLWLPLAEQGNAKAQYNLGVMYGNGRGVKQDYFKAVNWYRKAAEQGYAKA 99
Query: 197 AIAYGSLLLRGVQVPE-CLTKLNAKRVSAAKKARANLESNLMNPVEKAK 244
G++ G V + +N R AA++ AN + NL +K +
Sbjct: 100 QFNLGNMYANGRGVKQDDFEAVNWFR-KAAEQGHANAQFNLGVMYDKGQ 147
>gi|417711187|ref|ZP_12360193.1| hypothetical protein SFK272_0915 [Shigella flexneri K-272]
gi|333010056|gb|EGK29491.1| hypothetical protein SFK272_0915 [Shigella flexneri K-272]
Length = 121
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|430375762|ref|ZP_19430165.1| hypothetical protein MOMA_01390 [Moraxella macacae 0408225]
gi|429540993|gb|ELA09021.1| hypothetical protein MOMA_01390 [Moraxella macacae 0408225]
Length = 335
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 117 ANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
A GDP+AQY+LG L VE ++ ++A Y A Q H AL LG ++ G
Sbjct: 18 AEQGDPEAQYQLGLCYAQGLGVEKNF----REAARYWLMASKQNHAYALLYLGKLFEKGA 73
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
+ KD A C+ AS+ + + G L L+G+ V K + A++
Sbjct: 74 GIPKDYTKAYQCYQVASQHNLSEGKVRLGMLYLQGLGVERSAKKAVNLFIQGAEQGDVVA 133
Query: 233 ESNLMNPVEKA 243
+ NL EK
Sbjct: 134 QYNLAIAYEKG 144
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
S Q F + + +Q P A Y LG Y G V+K+ A + AS++ HA A +
Sbjct: 6 SIQHDFSHYQTLAEQGDPEAQYQLGLCYAQGLGVEKNFREAARYWLMASKQNHAYALLYL 65
Query: 201 GSLLLRGVQVPECLTK 216
G L +G +P+ TK
Sbjct: 66 GKLFEKGAGIPKDYTK 81
>gi|424879925|ref|ZP_18303557.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392516288|gb|EIW41020.1| putative peptidoglycan binding protein,Sel1 repeat protein [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 1259
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA+ GD A +E+G R + + DQ QA + + A D+ A Y LG++Y G
Sbjct: 980 LADAASNGDALALFEIGARYSDGRNGMTVDQKQAASWYQLAADKGFAPAQYRLGSMYEKG 1039
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DI A + +A+ +G+A A A+ Y S
Sbjct: 1040 NGVERDITKAKGFYEQAANQGNASAMHNLAVLYAS 1074
>gi|323450199|gb|EGB06082.1| hypothetical protein AURANDRAFT_29896, partial [Aureococcus
anophagefferens]
Length = 297
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQ +G L E + ++AF Y A DQ H GA + LG Y+ GD +
Sbjct: 210 AADRGIAVAQTSIGLFLESE----KRHEEAFRYFALAADQGHIGAEFCLGCSYMDGDGTE 265
Query: 176 KDIASALWCFHRASEKG 192
D+ A + F RA+ KG
Sbjct: 266 VDLGMARYWFERAAAKG 282
>gi|237746317|ref|ZP_04576797.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377668|gb|EEO27759.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 302
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 22/160 (13%)
Query: 62 RRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDAANM 119
R+ +PLLK + AD+ N A Y+L +H + + G K+ G A + AA
Sbjct: 45 RKALPLLKKS---------ADSGNAAALYYLGLMHRQGN--GVEKSAGKACQYFLKAAEG 93
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGAL---------YLLGTVYLT 170
G +A G R N + + D++AF + +KA D+ + LLG Y
Sbjct: 94 GYKEAYLAAGLCYRKGNGFSRDDREAFRWAKKAADETGESGMKDENRRELAVLLGDSYFA 153
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
GD +D A + +A+E G A A L G V
Sbjct: 154 GDGTVQDFPKAARWYEKAAELGDTRAQGALAFLYCSGKGV 193
>gi|422834708|ref|ZP_16882768.1| hypothetical protein ESOG_02369 [Escherichia coli E101]
gi|371613892|gb|EHO02380.1| hypothetical protein ESOG_02369 [Escherichia coli E101]
Length = 325
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEQGDSEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFTKAAE 272
>gi|374328612|ref|YP_005078796.1| Sel1 domain-containing protein repeat-containing protein
[Pseudovibrio sp. FO-BEG1]
gi|359341400|gb|AEV34774.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
FO-BEG1]
Length = 601
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G PDAQY LG Q + A ++ A +Q H A Y +G Y G V+
Sbjct: 396 AAKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQYRIGRAYEDGVGVE 455
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE-- 233
++ A ++ A+ + HA A G + G+ VP+ + + AA+ R LE
Sbjct: 456 QNHTEAANWYYLAATQNHAKAQFTLGRVYAIGLGVPQDEVEAAKWVLHAAE--RGYLEAQ 513
Query: 234 ----------SNLMNPVEKAKEQFEVAAQAGCNLGLR 260
S + +E+A F +AA+ G L+
Sbjct: 514 YRIGLAFYKGSGVKQNIERAYIWFYIAAENGSKPALK 550
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVP-GACKAMGAAL--LVDAANMGDPDAQYE 127
A E F LA E ++N A++ L ++ Y + G + AL + AA G DAQ+
Sbjct: 317 AAEKFRLAAEQGHAN--AQFNLGRI---YEIGLGVDQDYSEALKWYIRAAEQGVADAQFN 371
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
L Q +A + A Q HP A Y LG +Y TG V++D A+A
Sbjct: 372 LAVMYANGTGISQDLVEAVAWYHFAAKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRL 431
Query: 188 ASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+ +GHA A G GV V + T+
Sbjct: 432 AANQGHAEAQYRIGRAYEDGVGVEQNHTE 460
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G P A EL QSD + + Q + A Y L +Y G V
Sbjct: 108 AADKGHPKALSELEYLFNKGLIGPQSDDKVAMWTLHKAKQGYASAQYRLALLYHDGKGVP 167
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD + A + RA+ GH+GA + G + G V + + + AAK+ A+ +
Sbjct: 168 KDYSEAEKWYRRAASNGHSGAQLELGYMYANGQGVQQDYQEAEKWYLKAAKQGNADAQLE 227
Query: 236 LMN----------PVEKAKEQFEVAAQAGCNLG 258
L + EKAKE + +AA G N+G
Sbjct: 228 LGHIYADGRGVSRDYEKAKEWYVLAASQG-NMG 259
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 152 AVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
A +Q H A + LG +Y G V +D + AL + RA+E+G A A + G +
Sbjct: 324 AAEQGHANAQFNLGRIYEIGLGVDQDYSEALKWYIRAAEQGVADAQFNLAVMYANGTGIS 383
Query: 212 ECLTKLNAKRVSAAKKARANLESNL 236
+ L + A AAK+ + + NL
Sbjct: 384 QDLVEAVAWYHFAAKQGHPDAQYNL 408
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A GD +QY+LG Q +A + A +Q H A Y + +Y G V
Sbjct: 36 SAEQGDFHSQYKLGIIYEEAQGVPQDYAKAAKWFRSAAEQGHVAAQYRIANLYHKGRGVP 95
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+ A + A++KGH A L +G+ P+ K+ + AK+ A+ +
Sbjct: 96 QSFKEAEKWYQLAADKGHPKALSELEYLFNKGLIGPQSDDKVAMWTLHKAKQGYASAQYR 155
Query: 236 L 236
L
Sbjct: 156 L 156
>gi|340622035|ref|YP_004740487.1| hypothetical protein Ccan_12640 [Capnocytophaga canimorsus Cc5]
gi|339902301|gb|AEK23380.1| Uncharacterized protein ybeQ [Capnocytophaga canimorsus Cc5]
Length = 760
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 112 LLVDAANMGDPDAQYELG----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L +++AN G AQY+LG + + DY +QA + K+ +Q + LG +
Sbjct: 377 LFLESANKGHSGAQYDLGQAYYSGIGISKDY----EQAANWYRKSAEQGNTSGQNNLGWM 432
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKK 227
Y G V KD A+ + +A+E+G+ G + G VP+ + AA++
Sbjct: 433 YQNGFGVSKDYYEAVKWYRKAAEQGNTSGQNNLGEMYYYGYGVPKDYDEAVKWFRKAAEQ 492
Query: 228 ARANLESNLMN 238
A+ ++NL N
Sbjct: 493 GNASGQNNLGN 503
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ Q LG R V DY +A + KA +Q + LGT+Y G
Sbjct: 633 AAEQGNASGQNNLGLMYRNGLGVSKDY----NEAVKWYRKAAEQGYALGQNNLGTMYYNG 688
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V KD A+ + +A+E+G+A G + G VP+
Sbjct: 689 QGVSKDYNEAVKWYRKAAEQGNAFGQNNLGDMYYYGYGVPK 729
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 12/162 (7%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLR----V 134
A+ NT + L +++ Y+ G K A+ AA G+ Q LG R V
Sbjct: 454 AEQGNTSGQNNLGEMY--YYGYGVPKDYDEAVKWFRKAAEQGNASGQNNLGNMYRNGFGV 511
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
DY ++ + + KA +Q LG +Y G V KD A+ + +A+E+G A
Sbjct: 512 SKDYYEAVE----WYRKAAEQGKASGQSNLGEMYYYGYGVSKDYNEAVKWYKKATEQGDA 567
Query: 195 GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G + G VP+ + AA++ A ++NL
Sbjct: 568 SGQSNLGEMYYYGYGVPKDYDEAVKWFRKAAEQGNAVGQNNL 609
>gi|417627575|ref|ZP_12277822.1| hypothetical protein ECSTECMHI813_0480 [Escherichia coli
STEC_MHI813]
gi|345377879|gb|EGX09810.1| hypothetical protein ECSTECMHI813_0480 [Escherichia coli
STEC_MHI813]
Length = 325
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEQGDSEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|326204914|ref|ZP_08194767.1| Sel1 domain protein repeat-containing protein [Clostridium
papyrosolvens DSM 2782]
gi|325984963|gb|EGD45806.1| Sel1 domain protein repeat-containing protein [Clostridium
papyrosolvens DSM 2782]
Length = 959
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 77 LALEADNSNTHARYWLSKL-----HLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCR 131
LA ADN N A+Y L KL HL +V A A L +A + A Y LG R
Sbjct: 695 LAKAADNGNDLAQYALGKLYHDGNHLDKNVLRA-----AELFTKSAEQENQYAAYALG-R 748
Query: 132 LRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
+ + N+ + D A ++ + D + A Y L +YLTG+ ++KDI A+ +++
Sbjct: 749 MYLANEDIPEDVPMAIKWLTLSSDLGNQFAQYTLAKLYLTGEAIQKDIQKAMDLLTKSAL 808
Query: 191 KGHAGAAIAYGSLLLRGVQVPE 212
+ + A + G + L G +VP+
Sbjct: 809 QNNQLAQYSLGRIYLSGEEVPK 830
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 85 NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ 144
N HA+Y L K++++ L AA+ G+ AQY LG N ++ +
Sbjct: 667 NVHAQYMLGKIYMEDGSEYEDIEKALKWLAKAADNGNDLAQYALGKLYHDGNHLDKNVLR 726
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
A K+ +Q + A Y LG +YL + + +D+ A+ +S+ G+ A L
Sbjct: 727 AAELFTKSAEQENQYAAYALGRMYLANEDIPEDVPMAIKWLTLSSDLGNQFAQYTLAKLY 786
Query: 205 LRGVQVPECLTK 216
L G + + + K
Sbjct: 787 LTGEAIQKDIQK 798
>gi|293413940|ref|ZP_06656589.1| ybeQ protein [Escherichia coli B185]
gi|331651656|ref|ZP_08352675.1| putative TPR repeat protein [Escherichia coli M718]
gi|291433998|gb|EFF06971.1| ybeQ protein [Escherichia coli B185]
gi|331049934|gb|EGI21992.1| putative TPR repeat protein [Escherichia coli M718]
Length = 327
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEQGDSEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 68
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 69 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 113
>gi|261821024|ref|YP_003259130.1| Sel1 domain-containing protein repeat-containing protein
[Pectobacterium wasabiae WPP163]
gi|261605037|gb|ACX87523.1| Sel1 domain protein repeat-containing protein [Pectobacterium
wasabiae WPP163]
Length = 318
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L ++A G D+Q LG N Q +AF + KA Q + A + LG +Y G+
Sbjct: 52 LCESAYKGIADSQVSLGVIYSKGNGVKQDYHKAFEWYMKAAKQGNMKAQFNLGVLYSHGN 111
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
+ +D AL + +ASE+G+A A G + G+ V + K AA++ A
Sbjct: 112 GILQDHQKALEWYVKASEQGYAKAQFNLGMVYFDGLGVKQNYQKAFMWYTKAAEQGLAIA 171
Query: 233 ESNL 236
++NL
Sbjct: 172 QTNL 175
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG + +Q+AF + KA Q + A + LG +Y G VK
Sbjct: 163 AAEQGLAIAQTNLGLMYDKGIGAKKDNQKAFDWYMKAAQQGYDKAQFNLGMMYFDGQGVK 222
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A + +A+E+G A A G L + G V + K + + A+++ A + N
Sbjct: 223 QDYQEAFMWYKKAAEQGLAIAQFNLGVLFINGQGVQQNYQKASEWLMKASEQGDARAQFN 282
Query: 236 LM------NPVEKAKEQFEVAAQAGCNLGL 259
L VEK E+ + CN GL
Sbjct: 283 LALLYSNGLGVEKDMEKAKYYFVKSCNGGL 312
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
+ AA G+ AQ+ LG N +Q Q+A + KA +Q + A + LG VY G
Sbjct: 89 MKAAKQGNMKAQFNLGVLYSHGNGILQDHQKALEWYVKASEQGYAKAQFNLGMVYFDGLG 148
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
VK++ A + +A+E+G A A G + +G+
Sbjct: 149 VKQNYQKAFMWYTKAAEQGLAIAQTNLGLMYDKGI 183
>gi|261879336|ref|ZP_06005763.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270334038|gb|EFA44824.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 332
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
AN G PDAQ+ +G + + + + +Y + A +Q HP A + LG +Y GD V +
Sbjct: 51 ANEGSPDAQFYMGYYYTLSKERNATLARKWYSM--AAEQGHPEAAFNLGLMYRDGDGVIR 108
Query: 177 DIASALWCFHRASEKG 192
D A FH+++E G
Sbjct: 109 DTKKAFAYFHQSAETG 124
>gi|188025664|ref|ZP_02959400.2| hypothetical protein PROSTU_01244 [Providencia stuartii ATCC 25827]
gi|188022670|gb|EDU60710.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
Length = 327
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G+ DAQ++LG E++ + QQ A + + A +Q HP A +LG +Y G
Sbjct: 123 LTLAAEQGEADAQHQLGWLYMEESESNHASQQSALKWFKAAAEQGHPSAQNMLGWLYENG 182
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
K +I AL + A+++G+A A G +G
Sbjct: 183 ATGKPEIEEALKWYQEAAKQGNAFALNNLGWFYWQG 218
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A AA GDP+AQ L QS Q+A ++ ++A Q A Y LG +Y
Sbjct: 48 AKYFQQAAEYGDPEAQLYLAALYESGLGVKQSWQEAIHWFKEAAMQGSLPAQYQLGLIYE 107
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLR 206
G+ V+K + AL A+E+G A A G L +
Sbjct: 108 KGEGVEKSRSQALHWLTLAAEQGEADAQHQLGWLYME 144
>gi|449108565|ref|ZP_21745207.1| polymorphic outer membrane protein [Treponema denticola ATCC 33520]
gi|448961366|gb|EMB42071.1| polymorphic outer membrane protein [Treponema denticola ATCC 33520]
Length = 793
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G+ +AQY LG R + D V+ D ++AF + +K DQ + A LG Y G V+
Sbjct: 73 AEGGNSEAQYLLGKRYS-DGDGVEKDYKKAFEWFKKGADQGNANAQNALGVCYDNGQGVE 131
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
K+ A+ + +A E+G+A A G + G V + K AA++ A ++N
Sbjct: 132 KNYTIAIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKSYEKAFELYKKAAEQGNAYAQNN 191
Query: 236 L 236
L
Sbjct: 192 L 192
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQY 126
+T E +L L+A+ N+ A+Y L K + G K A A+ G+ +AQ
Sbjct: 61 ETISEFDKLKLDAEGGNSEAQYLLGKRYS--DGDGVEKDYKKAFEWFKKGADQGNANAQN 118
Query: 127 ELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
LG VE +Y A +KA++Q + A LG +Y G V K A
Sbjct: 119 ALGVCYDNGQGVEKNYTI----AIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKSYEKAF 174
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+ +A+E+G+A A G + G V + ++ AAK+ +SNL
Sbjct: 175 ELYKKAAEQGNAYAQNNLGYMYENGEGVEKNTSEAIKWYTKAAKQGHVYAQSNL 228
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
+QA + K+ +Q H A Y LG +Y G KKD A+ + +++E+GHA A G
Sbjct: 383 KQALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGHAYAQNNLGY 442
Query: 203 LLLRGVQV 210
+ G V
Sbjct: 443 MYENGKGV 450
>gi|403052608|ref|ZP_10907092.1| hypothetical protein AberL1_13916 [Acinetobacter bereziniae LMG
1003]
Length = 282
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%)
Query: 92 LSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEK 151
+ ++L H K + + AA G+ DAQY LG + + Q QA+ + +
Sbjct: 169 IGNMYLHGHGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYKWFLE 228
Query: 152 AVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA 197
A +Q A Y LG +YL G V K++++++ F ++++ G++ AA
Sbjct: 229 AANQGDHNAQYHLGKMYLDGLGVDKNLSNSISWFEKSAKSGNSYAA 274
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%)
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
A + + AAN G A+ +G + Q +A + KA +Q A Y LG
Sbjct: 148 AQASEYYLKAANAGYSAAENNIGNMYLHGHGVSQDKLKASQWYIKAAEQGEVDAQYNLGL 207
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+Y GD +K+D + A F A+ +G A G + L G+ V + L+
Sbjct: 208 MYFLGDGIKQDYSQAYKWFLEAANQGDHNAQYHLGKMYLDGLGVDKNLS 256
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 20/164 (12%)
Query: 117 ANMGDPDAQYELGCRLR-VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A GDP+AQY +G D + +AF + + + D+ + A Y L + + +K
Sbjct: 49 AEQGDPEAQYNMGVLFTDGYKDLKPNIIEAFKWYKLSADKGYAKAKYNLAILLSSDSGIK 108
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
D A A F A+ G + G+ G+ V E + + + AA + E+N
Sbjct: 109 NDYAQAKKLFEDAAALGDIPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENN 168
Query: 236 LMNP-----------------VEKAKEQFEVAAQAGCNLGLRWL 262
+ N KA EQ EV AQ NLGL +
Sbjct: 169 IGNMYLHGHGVSQDKLKASQWYIKAAEQGEVDAQ--YNLGLMYF 210
>gi|440715468|ref|ZP_20896015.1| Sel1 domain protein repeat-containing protein [Rhodopirellula
baltica SWK14]
gi|436439812|gb|ELP33226.1| Sel1 domain protein repeat-containing protein [Rhodopirellula
baltica SWK14]
Length = 604
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELG----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY LG L VE D+V++ + +KA DQ H A +G +Y G
Sbjct: 251 AAVAGLDSAQYNLGYMYDVGLGVEQDFVEASS----WYQKAADQNHVMAQRAIGMMYRDG 306
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D V +D + A+ F +++ +G+A A + S+ G VP+
Sbjct: 307 DGVTQDHSLAVEWFRKSAAQGYALAQESLASMYFHGRGVPQ 347
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A++G AQ+ LGC Q+D +A + ++A +Q A LG+++ G +++
Sbjct: 108 ADLGHAHAQFVLGCMHAEGLGVPQNDVEAVRWFQRAAEQDFAVAQNWLGSMHQQGRGIRR 167
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D A FHRA+++G + A RG P+
Sbjct: 168 DDVQAFRWFHRAAQQGLSDAQFNLAICYRRGTGTPQ 203
>gi|212704272|ref|ZP_03312400.1| hypothetical protein DESPIG_02327 [Desulfovibrio piger ATCC 29098]
gi|212672234|gb|EEB32717.1| Sel1 repeat protein [Desulfovibrio piger ATCC 29098]
Length = 352
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G DAQY LG Q D +A ++ ++A +Q H A L +Y G
Sbjct: 190 AANQGLADAQYSLGWMYLNAKASNQDDTKAAHWFQRAAEQDHLKAQNNLAYMYAEGRGFA 249
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ + RA+E+G+A A G + +G VP+ K
Sbjct: 250 QDNLKAVEWYTRAAERGYAEAQYNLGFMYEQGRGVPQDYAK------------------- 290
Query: 236 LMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEEKRLLTESSR 278
+ KA EQ E AAQ +LGL + Q + R L+E++R
Sbjct: 291 AVEWYRKAAEQNEPAAQ--YSLGLMYDQGTGVQ--RNLSEATR 329
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQY LG Q +A + KA +Q P A Y LG +Y G V+
Sbjct: 262 AAERGYAEAQYNLGFMYEQGRGVPQDYAKAVEWYRKAAEQNEPAAQYSLGLMYDQGTGVQ 321
Query: 176 KDIASALWCFHRASEKG 192
++++ A + A++ G
Sbjct: 322 RNLSEATRWYRLAAKNG 338
>gi|417842060|ref|ZP_12488155.1| putative tetratricopeptide-like helical [Haemophilus haemolyticus
M19501]
gi|341947840|gb|EGT74481.1| putative tetratricopeptide-like helical [Haemophilus haemolyticus
M19501]
Length = 187
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 112 LLVDAANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L + A G +AQY LG V+ DY +A + KA +Q + A LG++
Sbjct: 55 LWLPLAEQGQKNAQYNLGVMYDNGQGVKQDYF----EAMKWYRKAAEQGYAMAQVNLGSM 110
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
Y G VK+D A+ + +A+E+G+A A G L +GVQV + L K
Sbjct: 111 YYNGHGVKQDDFEAVKWYRKAAEQGNAKAQFIMGGLYWFGKGVQVNKSLAK 161
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
P Q++ G DY Q AF +Q A Y LG +Y G VK+D A
Sbjct: 33 PKQQFQQGFEATTRGDY----QTAFKLWLPLAEQGQKNAQYNLGVMYDNGQGVKQDYFEA 88
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ + +A+E+G+A A + GS+ G V +
Sbjct: 89 MKWYRKAAEQGYAMAQVNLGSMYYNGHGVKQ 119
>gi|307611062|emb|CBX00703.1| Dot/Icm T4SS effector [Legionella pneumophila 130b]
Length = 375
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVP-GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N A+ L+ + + P G KA AA+ + D QY LG
Sbjct: 83 ANQGNVDAQVLLAGFYWYLNTPEGYKKAF--EWYQKAADQNNADGQYGLGYMYDTGTGVP 140
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q+ A + +KA +Q + A +G Y TG VKKD AL + +A++ G+A A
Sbjct: 141 QNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYN 200
Query: 200 YGSLLLRGVQVPECLTK 216
G + +G VP+ K
Sbjct: 201 LGLMYEQGDGVPKDFQK 217
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA++G+ AQY LG + + D V D Q+A Y EKA +Q H + LG +Y +G
Sbjct: 189 AADLGNASAQYNLGL-MYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYDSGKLG 247
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K D+ A + + ++++ G+A A + G V + L
Sbjct: 248 KSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSL 287
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 9/173 (5%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLH-LKYHVP-GACKAMGAALLVDAANMGDPDAQ 125
E ++ A E AD +N +Y L ++ VP + AM AA G+ +A
Sbjct: 105 EGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAM--VWYKKAAEQGNSNAA 162
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+G + QA + KA D + A Y LG +Y GD V KD A F
Sbjct: 163 LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYF 222
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN 238
+A+ + HA + + G L G L K +A AN + NL +
Sbjct: 223 EKAANQDHAKSQLELGYLYDSGKLGKSDLQKAAFWYQKSADLGNANAQFNLAD 275
>gi|54295067|ref|YP_127482.1| hypothetical protein lpl2147 [Legionella pneumophila str. Lens]
gi|53754899|emb|CAH16387.1| hypothetical protein lpl2147 [Legionella pneumophila str. Lens]
Length = 373
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVP-GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N A+ L+ + + P G KA AA+ + D QY LG
Sbjct: 81 ANQGNVDAQVLLAGFYWYLNTPEGYKKAF--EWYQKAADQNNADGQYGLGYMYDTGTGVP 138
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q+ A + +KA +Q + A +G Y TG VKKD AL + +A++ G+A A
Sbjct: 139 QNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYN 198
Query: 200 YGSLLLRGVQVPECLTK 216
G + +G VP+ K
Sbjct: 199 LGLMYEQGDGVPKDFQK 215
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA++G+ AQY LG + + D V D Q+A Y EKA +Q H + LG +Y +G
Sbjct: 187 AADLGNASAQYNLGL-MYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYDSGKLG 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K D+ A + + ++++ G+A A + G V + L
Sbjct: 246 KSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSL 285
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 9/173 (5%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLH-LKYHVP-GACKAMGAALLVDAANMGDPDAQ 125
E ++ A E AD +N +Y L ++ VP + AM AA G+ +A
Sbjct: 103 EGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAM--VWYKKAAEQGNSNAA 160
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+G + QA + KA D + A Y LG +Y GD V KD A F
Sbjct: 161 LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYF 220
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMN 238
+A+ + HA + + G L G L K +A AN + NL +
Sbjct: 221 EKAANQDHAKSQLELGYLYDSGKLGKSDLQKAAFWYQKSADLGNANAQFNLAD 273
>gi|395827877|ref|XP_003787118.1| PREDICTED: protein sel-1 homolog 1 [Otolemur garnettii]
Length = 732
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 385 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 444
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 445 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 480
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 384 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 442
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 443 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 499
>gi|428165092|gb|EKX34096.1| hypothetical protein GUITHDRAFT_98165 [Guillardia theta CCMP2712]
Length = 347
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Query: 72 KENFELALE-----ADNSNTHARYWLSKLHLKYHVPGA--CKAMGAALLVDAANMGDPDA 124
KENF+ A + A+Y L H Y+ G ++ A L + AA G P A
Sbjct: 206 KENFQEAASLFSKACEQGLAKAQYMLGLCH--YYGQGVENSESKAADLFLKAAEQGHPQA 263
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
+Y++ ++ ++A + EKA Q HP A Y LG Y G V K AL
Sbjct: 264 EYQIAACYYSGRGVEKNLEKAVEWFEKAAKQSHPVAQYSLGQCYYYGRGVPKSEEKALEY 323
Query: 185 FHRASEKGHAGAAIAYGSLL 204
+ A+ +GHA A G +L
Sbjct: 324 YTMAANQGHAQAKYWIGIIL 343
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY LG + ++ +QA + KA DQ H A Y LG Y G V+
Sbjct: 110 AAEKGHLDAQYNLGVCMYYGRGVDRNIEQAVAWYLKAADQGHVAAEYALGVCYEKGRGVQ 169
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
KD+ ++ + A+ G A A G G
Sbjct: 170 KDLVKSIKYYTNAANAGDASAQYKLGECFYYG 201
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 114 VDAANMGDPDAQYELG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+AAN GD AQY+LG C + ++ Q+A KA +Q A Y+LG + G
Sbjct: 180 TNAANAGDASAQYKLGECFYYGRSGLKENFQEAASLFSKACEQGLAKAQYMLGLCHYYGQ 239
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V+ + A F +A+E+GH A + G V + L K AAK++
Sbjct: 240 GVENSESKAADLFLKAAEQGHPQAEYQIAACYYSGRGVEKNLEKAVEWFEKAAKQSHPVA 299
Query: 233 ESNLMNPV----------EKAKEQFEVAAQAGCNLGLRWLQRI 265
+ +L EKA E + +AA G W+ I
Sbjct: 300 QYSLGQCYYYGRGVPKSEEKALEYYTMAANQGHAQAKYWIGII 342
>gi|1840148|gb|AAB47276.1| 29 kDa protein [Helicobacter pylori]
Length = 256
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+A A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVK 156
>gi|332634806|ref|NP_001193837.1| protein sel-1 homolog 1 precursor [Bos taurus]
gi|296482865|tpg|DAA24980.1| TPA: sel-1 suppressor of lin-12-like [Bos taurus]
Length = 794
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|421626736|ref|ZP_16067564.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
gi|408695053|gb|EKL40612.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
Length = 301
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L +A +G +A +LG R ND ++ D +A + E+ + +P A++ LG Y
Sbjct: 80 LFEKSAQLGSSNAMLQLGLIYRNGNDLIKKDDLKALKWFEQGAKKGNPSAIHNLGVSYYK 139
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G + +D A A F +++E G + + LL G V + K + AA +
Sbjct: 140 GLGITEDKAKAFKYFSQSAELGLLQSQVIVAGLLYNGEGVTKDHKKAFEWALKAANQGDV 199
Query: 231 NLESNLMNPVEK----------AKEQFEVAAQAGCNLG 258
++N+ E AK+ FE AA G LG
Sbjct: 200 ESQNNIGLAYENGDGVAKGPVLAKKWFEKAANNGSVLG 237
>gi|419119143|ref|ZP_13664124.1| sel1 repeat family protein [Escherichia coli DEC5B]
gi|377972547|gb|EHV35896.1| sel1 repeat family protein [Escherichia coli DEC5B]
Length = 121
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|342904365|ref|ZP_08726166.1| TPR repeat, SEL1 subfamily [Haemophilus haemolyticus M21621]
gi|341953605|gb|EGT80109.1| TPR repeat, SEL1 subfamily [Haemophilus haemolyticus M21621]
Length = 255
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG V Q D +A + KA +Q A LG +Y+ G VK
Sbjct: 91 AAEQGIVDAQFNLGVMYGVGQGVKQDDFEAVKWYRKAAEQGLANAQNNLGNMYVKGRGVK 150
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A+ F +A+E+G+A A + G + G V + A+ V KKA N ++
Sbjct: 151 QDDFEAVKWFRKAAEQGNAQAQESLGLMYANGRGVKQDY----AESVKWVKKAAENGSAD 206
Query: 236 ----------LMNPVEK----AKEQFEVAAQAGCNLGLRWLQRIEEEE 269
L ++K AKE F A G +G + ++ E
Sbjct: 207 GQLKLGAAYFLGQGIQKDKTLAKEWFGKACDNGNQMGCEYYGKLNRGE 254
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A G+ AQ+ LG V Q D +A + KA +Q A + LG +Y G
Sbjct: 51 LWLSLAEQGNAKAQFNLGVMYEVGQGVKQDDFEAVKWYRKAAEQGIVDAQFNLGVMYGVG 110
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
VK+D A+ + +A+E+G A A G++ ++G V +
Sbjct: 111 QGVKQDDFEAVKWYRKAAEQGLANAQNNLGNMYVKGRGVKQ 151
>gi|449119237|ref|ZP_21755633.1| polymorphic outer membrane protein [Treponema denticola H1-T]
gi|449121627|ref|ZP_21757973.1| polymorphic outer membrane protein [Treponema denticola MYR-T]
gi|448949068|gb|EMB29893.1| polymorphic outer membrane protein [Treponema denticola MYR-T]
gi|448950227|gb|EMB31049.1| polymorphic outer membrane protein [Treponema denticola H1-T]
Length = 721
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G+ +AQY LG R + D V+ D ++AF + +K DQ + A LG Y G V+
Sbjct: 73 AEGGNSEAQYLLGKRYS-DGDGVEKDYKKAFEWFKKGADQGNANAQNALGVCYDNGQGVE 131
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
K+ A+ + +A E+G+A A G + G V + K AA++ A ++N
Sbjct: 132 KNYTIAIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKSYEKAFELYKKAAEQGNAYAQNN 191
Query: 236 L 236
L
Sbjct: 192 L 192
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQY 126
+T E +L L+A+ N+ A+Y L K + G K A A+ G+ +AQ
Sbjct: 61 ETISEFDKLKLDAEGGNSEAQYLLGKRYS--DGDGVEKDYKKAFEWFKKGADQGNANAQN 118
Query: 127 ELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
LG VE +Y A +KA++Q + A LG +Y G V K A
Sbjct: 119 ALGVCYDNGQGVEKNYTI----AIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKSYEKAF 174
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL------ 236
+ +A+E+G+A A G + G V + ++ AA + AN + +L
Sbjct: 175 ELYKKAAEQGNAYAQNNLGYMYENGEGVEKNTSEAIKWYTKAADQGVANAQDSLGWICEV 234
Query: 237 MNPVEKAKEQFEVAAQAGCNLGLRWLQRI 265
KA + +AAQ G G L R+
Sbjct: 235 REEYNKAAAMYLMAAQQGHANGQNNLGRM 263
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
+QA + K+ +Q H A Y LG +Y G KKD A+ + +++E+GHA A G
Sbjct: 311 KQALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGHAYAQNNLGY 370
Query: 203 LLLRGVQV 210
+ G V
Sbjct: 371 MYENGKGV 378
>gi|341904620|gb|EGT60453.1| hypothetical protein CAEBREN_28688 [Caenorhabditis brenneri]
Length = 701
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G DA LG + D Q+AF Y+ K+VD+ +P A +LG +Y+ G
Sbjct: 333 LTSAAESGSADALTYLGKMYLDGTPFTPKDYQKAFEYLTKSVDKSNPSAQAVLGAMYMKG 392
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
VKK+ AL +S+K +A + L +G+
Sbjct: 393 KGVKKNYEKALKLLTLSSDKKNADGQMYLAELNYKGI 429
>gi|341889266|gb|EGT45201.1| CBN-SEL-1 protein [Caenorhabditis brenneri]
Length = 685
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G DA LG + D Q+AF Y+ K+VD+ +P A +LG +Y+ G
Sbjct: 317 LTSAAESGSADALTYLGKMYLDGTPFTPKDYQKAFEYLTKSVDKSNPSAQAVLGAMYMKG 376
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
VKK+ AL +S+K +A + L +G+
Sbjct: 377 KGVKKNYEKALKLLTLSSDKKNADGQMYLAELNYKGI 413
>gi|338812695|ref|ZP_08624862.1| Sel1 domain-containing protein [Acetonema longum DSM 6540]
gi|337275319|gb|EGO63789.1| Sel1 domain-containing protein [Acetonema longum DSM 6540]
Length = 567
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Query: 76 ELALEADNSNTHARYWLSK-LHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
EL A + A+Y L L+L VP K A +A+ G+ AQ LG
Sbjct: 43 ELRQSAAKGDPQAQYQLGHILYLGQGVPRDYKEA-AKWFKQSADQGNSAAQTALGFAYMS 101
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
N Q+ +QA Y+ K+ DQ A ++LG Y +G V KD A A+ + +++++G
Sbjct: 102 GNGVEQNPKQAVYWWRKSADQGSMQAQHMLGVSYSSGYVVNKDAAEAVAWWQKSADQGFP 161
Query: 195 GAAIAYGSLLLRGVQVPECLT 215
A G G V + T
Sbjct: 162 AAQYFLGMAYYSGTGVTKDQT 182
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%)
Query: 103 GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALY 162
G +A A L +A GDP AQY+LG L + + ++A + +++ DQ + A
Sbjct: 34 GQAQAATIAELRQSAAKGDPQAQYQLGHILYLGQGVPRDYKEAAKWFKQSADQGNSAAQT 93
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKG 192
LG Y++G+ V+++ A++ + +++++G
Sbjct: 94 ALGFAYMSGNGVEQNPKQAVYWWRKSADQG 123
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A+ G AQ+ LG + +A + +K+ DQ P A Y LG Y +G V
Sbjct: 119 SADQGSMQAQHMLGVSYSSGYVVNKDAAEAVAWWQKSADQGFPAAQYFLGMAYYSGTGVT 178
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD A +A++ G+A A G G+ V
Sbjct: 179 KDQTLAFTWIRKAADNGYAPAQHRVGIHYYNGIGV 213
>gi|293606766|ref|ZP_06689117.1| Sel1 domain protein, partial [Achromobacter piechaudii ATCC 43553]
gi|292814770|gb|EFF73900.1| Sel1 domain protein [Achromobacter piechaudii ATCC 43553]
Length = 173
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ AQ +G Q D QA ++ KA DQ H A LGT+Y G V
Sbjct: 79 AADQGNAAAQDRMGGAYLSGRGVPQDDSQAAQWLRKAADQGHAPAQDTLGTLYQQGRGVP 138
Query: 176 KDIASALWCFHRASEKG 192
KD + A+ F RA+++G
Sbjct: 139 KDESQAVQWFRRAADQG 155
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 101 VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
P A KA+ AA G AQ LG Q D A + KA DQ + A
Sbjct: 30 APDAGKAV--EWFGRAAEQGLAKAQNNLGAMYFTGTGVPQDDALAVQWWRKAADQGNAAA 87
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+G YL+G V +D + A +A+++GHA A G+L +G VP+
Sbjct: 88 QDRMGGAYLSGRGVPQDDSQAAQWLRKAADQGHAPAQDTLGTLYQQGRGVPK 139
>gi|326431259|gb|EGD76829.1| hypothetical protein PTSG_12692 [Salpingoeca sp. ATCC 50818]
Length = 1009
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 112 LLVDAANMGDPDAQYELGCRLR--VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
L + AA MGD +Q++LG + +S AF + +A D+ P AL LG +
Sbjct: 673 LALRAAMMGDASSQFQLGVVASNGLLGGSTRSAAYAFAWYRQAADRHLPQALVNLGNCHA 732
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAI 198
TG + + A+ C+ +A+++GHA A
Sbjct: 733 TGTGTAPNASKAVECYRQAAQRGHAAGAF 761
>gi|264677901|ref|YP_003277808.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262208414|gb|ACY32512.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 445
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG- 171
+V+AA G+ AQYELG ++ A ++ A + H + YLLG VY+ G
Sbjct: 28 MVNAAKTGNVAAQYELGKAYLYGKGVEKNADDALRWLRLAAEHNHAPSQYLLGLVYVLGA 87
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ VKKD + L H+A+ G+ A G++ L+G V
Sbjct: 88 EGVKKDPEAGLTHIHQAANAGNLDAQNLLGTIYLKGEAV 126
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 39/81 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G AQY LG +S QA + A +Q A Y LGT+Y G VK
Sbjct: 358 AANQGYAKAQYNLGTLYENGEGVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVK 417
Query: 176 KDIASALWCFHRASEKGHAGA 196
K+ A RA+E+GHA A
Sbjct: 418 KNAKQAREWLQRAAEQGHAPA 438
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 76 ELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLR 133
E+ A N A+Y L K +L + G K AL L AA +QY LG
Sbjct: 27 EMVNAAKTGNVAAQYELGKAYL--YGKGVEKNADDALRWLRLAAEHNHAPSQYLLGLVYV 84
Query: 134 VENDYVQSDQQA-FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
+ + V+ D +A +I +A + + A LLGT+YL G+ V+KD A+ + RA+++G
Sbjct: 85 LGAEGVKKDPEAGLTHIHQAANAGNLDAQNLLGTIYLKGEAVEKDAATGVAWLERAAQQG 144
Query: 193 HAGAAIAYGSLLLRG 207
A A + G + +G
Sbjct: 145 SATAQNSLGFVYRKG 159
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 114 VDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+++A G+ AQY +G + + Q + +A + A +Q + A Y LGT+Y G+
Sbjct: 319 LNSALKGNVLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGE 378
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV-------QVPECLTKLNAKRVSAA 225
V K +A AL + A+E+ A A A G+L G+ Q E L + + + A
Sbjct: 379 GVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNAKQAREWLQRAAEQGHAPA 438
Query: 226 KKARANL 232
KKA A L
Sbjct: 439 KKALAQL 445
>gi|194745849|ref|XP_001955397.1| GF18742 [Drosophila ananassae]
gi|190628434|gb|EDV43958.1| GF18742 [Drosophila ananassae]
Length = 804
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 116 AANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
A+ MGDP Q LG L V D ++ A Y +A DQ LG +Y TG
Sbjct: 394 ASEMGDPVGQSGLGLMYLKGLGVPKDTIK----ALSYFTQAADQNWVDGQLQLGNMYFTG 449
Query: 172 DCVKKDIASALWCFHRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAA 225
+ VK D AL F+ A+ GH G AYG +LR K ++R +
Sbjct: 450 NGVKTDYKLALKYFNLATHSGHVLAYYNLGVMHAYGLGMLRSCPAAVEFFKTVSERGRWS 509
Query: 226 KKARANLESNLMNPVEKAKEQFEVAAQAG 254
+ N +++A Q+ + A+ G
Sbjct: 510 SRLMHAYSDYKKNRIDEAYMQYSLMAEVG 538
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCV 174
A+ GD +Q LG Q D Q+A Y +A + + LG +YL G D +
Sbjct: 321 ADKGDVQSQVGLGQLYYQGGKATQQDHQKALEYFTQAANAGNAVGFAFLGKLYLEGSDQI 380
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
K D +A F RASE G G + L+G+ VP+ K
Sbjct: 381 KADNETAFKYFTRASEMGDPVGQSGLGLMYLKGLGVPKDTIK 422
>gi|86356208|ref|YP_468100.1| hemagglutinin protein [Rhizobium etli CFN 42]
gi|86280310|gb|ABC89373.1| putative hemagglutinin protein [Rhizobium etli CFN 42]
Length = 1249
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + + DQ QA + + + D+ A Y LG++Y G
Sbjct: 970 LADAAQGGDALALFEIGARYSDGRNGMSVDQKQAANWYQLSADKGFAPAQYRLGSMYEKG 1029
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DIA A + +A+ +G+A A A+ Y S
Sbjct: 1030 NGVERDIAKAKGFYEQAANQGNASAMHNLAVLYAS 1064
>gi|315223817|ref|ZP_07865665.1| TPR repeat protein [Capnocytophaga ochracea F0287]
gi|314946147|gb|EFS98148.1| TPR repeat protein [Capnocytophaga ochracea F0287]
Length = 278
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ +LG QSD+QA + +KA DQ A LG Y G V
Sbjct: 117 AAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVA 176
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ + A+ + +A+ +G A GS +G +P+ TK
Sbjct: 177 QSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTK 217
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +Q +LG VQS ++A Y+ +KA +Q + A LG Y G VK
Sbjct: 81 AAKQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVK 140
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ A+ F +A+++ A A G +G+ V +
Sbjct: 141 QSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQ 177
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD +AQ LG QS +A ++ EKA +Q A +LG Y G V
Sbjct: 189 AANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVD 248
Query: 176 KDIASALWCFHRA 188
K A++ F +
Sbjct: 249 KSQKRAIYWFEKG 261
>gi|145354703|ref|XP_001421617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581855|gb|ABO99910.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 536
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDAANMGDPDAQYELGCRLRVENDY 138
AD N A+ + +L+ G K +GAA L DAAN GD A LG
Sbjct: 130 ADMGNVDAQVTMGRLY-SLGARGLRKDVGAARKYLTDAANAGDATAMANLGNMYANGFGV 188
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAI 198
+ A ++ KA + + Y LG + L G V +D A A+ ++A+E+G + A
Sbjct: 189 DVDNATALHWFRKAAKKGNAMGRYGLGYMTLAGHGVAQDHALAVQYLNQAAEQGLSDARY 248
Query: 199 AYGSLLLRGVQVPECLTK 216
G L LRG+ V + TK
Sbjct: 249 FLGVLHLRGIGVKQDFTK 266
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +Y LG + Q A Y+ +A +Q A Y LG ++L G VK
Sbjct: 202 AAKKGNAMGRYGLGYMTLAGHGVAQDHALAVQYLNQAAEQGLSDARYFLGVLHLRGIGVK 261
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
+D A F+ AS GH A + L G+ P +A
Sbjct: 262 QDFTKAYHHFNIASHVGHEVATYNLAMMQLNGMGFPSSCASASA 305
>gi|420427400|ref|ZP_14926443.1| cysteine-rich protein X [Helicobacter pylori Hp A-9]
gi|393040898|gb|EJB41915.1| cysteine-rich protein X [Helicobacter pylori Hp A-9]
Length = 256
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+A A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVK 156
>gi|291406677|ref|XP_002719663.1| PREDICTED: sel-1 suppressor of lin-12-like isoform 2 [Oryctolagus
cuniculus]
Length = 744
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 354 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 413
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 414 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 449
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 353 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 411
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 412 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 468
>gi|210135275|ref|YP_002301714.1| cysteine-rich protein X [Helicobacter pylori P12]
gi|210133243|gb|ACJ08234.1| cysteine-rich protein X [Helicobacter pylori P12]
Length = 256
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+A A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVK 156
>gi|426234313|ref|XP_004011140.1| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1 [Ovis
aries]
Length = 768
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 383 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 442
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 443 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 478
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 382 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 440
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 441 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 497
>gi|60360536|dbj|BAD90512.1| mKIAA4137 protein [Mus musculus]
Length = 832
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 442 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 501
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 502 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 537
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 441 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 499
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 500 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 556
>gi|46309573|ref|NP_035474.1| protein sel-1 homolog 1 isoform b precursor [Mus musculus]
gi|4159995|gb|AAD05210.1| SELlL [Mus musculus]
gi|20073079|gb|AAH26816.1| Sel-1 suppressor of lin-12-like (C. elegans) [Mus musculus]
gi|74144524|dbj|BAE36100.1| unnamed protein product [Mus musculus]
Length = 740
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 350 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 409
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 410 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 445
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 343 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 399
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 400 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 459
Query: 189 SEKGH 193
S+ GH
Sbjct: 460 SQGGH 464
>gi|420409908|ref|ZP_14909053.1| cysteine-rich protein X [Helicobacter pylori NQ4200]
gi|393029041|gb|EJB30123.1| cysteine-rich protein X [Helicobacter pylori NQ4200]
Length = 248
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 42 ASFYKSAIKNGEPLAYVLLGIMYENGRGLPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 101
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+A A I G + + G VP K
Sbjct: 102 EGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVK 148
>gi|114326859|ref|YP_744016.1| TPR repeat-containing protein [Granulibacter bethesdensis CGDNIH1]
gi|114315033|gb|ABI61093.1| tetratricopeptide repeat family protein [Granulibacter bethesdensis
CGDNIH1]
Length = 652
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%)
Query: 80 EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
+A + +A+YW ++ L+ G + + AA+ G +A+ L
Sbjct: 449 KAADGVVNAQYWYGRMLLEGRGLDVDAEAGRSWIERAASTGMVEAEVAFAELLVTGRGGA 508
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
+ +A Y E+A + H GA++ +G + G V D A+ + A+E+GHA A +
Sbjct: 509 KDHPEALVYFERAAGRGHIGAMFAIGAMMGGGHEVPTDREKAIIWYRAAAERGHAHAQLM 568
Query: 200 YGSLLLRGV 208
G L RG+
Sbjct: 569 LGRFLARGL 577
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 123 DAQYELGCRLRVENDYVQSDQQAF-YYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+AQY G R+ +E + D +A +IE+A A + +TG KD A
Sbjct: 456 NAQYWYG-RMLLEGRGLDVDAEAGRSWIERAASTGMVEAEVAFAELLVTGRGGAKDHPEA 514
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
L F RA+ +GH GA A G+++ G +VP
Sbjct: 515 LVYFERAAGRGHIGAMFAIGAMMGGGHEVP 544
>gi|429755968|ref|ZP_19288584.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429172225|gb|EKY13799.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 278
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ +LG QSD+QA + +KA DQ A LG Y G V
Sbjct: 117 AAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVA 176
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ + A+ + +A+ +G A GS +G +P+ TK
Sbjct: 177 QSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTK 217
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +Q +LG VQS ++A Y+ +KA +Q + A LG Y G VK
Sbjct: 81 AAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVK 140
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ A+ F +A+++ A A G +G+ V +
Sbjct: 141 QSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQ 177
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD +AQ LG QS +A ++ EKA +Q A +LG Y G V
Sbjct: 189 AANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVD 248
Query: 176 KDIASALWCFHRA 188
K A++ F +
Sbjct: 249 KSQKRAIYWFEKG 261
>gi|389681709|ref|ZP_10173053.1| Sel1 domain protein [Pseudomonas chlororaphis O6]
gi|399007909|ref|ZP_10710405.1| Sel1 repeat protein [Pseudomonas sp. GM17]
gi|425901757|ref|ZP_18878348.1| Sel1 domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|388554244|gb|EIM17493.1| Sel1 domain protein [Pseudomonas chlororaphis O6]
gi|397892885|gb|EJL09361.1| Sel1 domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|398119091|gb|EJM08804.1| Sel1 repeat protein [Pseudomonas sp. GM17]
Length = 184
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%)
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
N Q +A +KA D+ A Y LG Y G +D+ AL F +AS +GHA
Sbjct: 41 NTQSQDLSEALAVCQKAADEGDAQAQYELGEFYYEGKNTPRDLNQALSYFEKASLQGHAQ 100
Query: 196 AAIAYGSLLLRGVQVP 211
A G++ RG VP
Sbjct: 101 AQFKLGTMFFRGEGVP 116
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA+ GD AQYELG E D QA Y EKA Q H A + LGT++ G+ V
Sbjct: 57 AADEGDAQAQYELG-EFYYEGKNTPRDLNQALSYFEKASLQGHAQAQFKLGTMFFRGEGV 115
Query: 175 KKDIASALWCFHRASEKG 192
+ A A+ G
Sbjct: 116 PANNVQAYIVLKMAAVNG 133
>gi|295112080|emb|CBL28830.1| FOG: TPR repeat, SEL1 subfamily [Synergistetes bacterium SGP1]
Length = 846
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN GD +A +LG L E D V+ + +QA + +A++ A LG +Y G+ V
Sbjct: 608 AANEGDAEAARKLGL-LYHEGDGVRRNYKQAAEWFRRAMEGGDASAPRYLGLMYANGNGV 666
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
KD A A CF A E+G A G L G V + K A ++ A+ E
Sbjct: 667 GKDYAKAAECFRIAGERGDAWGQYNLGVLYYGGEGVKQDYGKAVEWYCKAVEQGLASAEF 726
Query: 235 NLMNPVE-----------------KAKEQFEVAAQAGCNLGLRW 261
NL E +A EQ + AAQ CNLG +
Sbjct: 727 NLGLMYEQGCGVARDYAKAAELYRRAAEQGDAAAQ--CNLGFFY 768
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 76/193 (39%), Gaps = 23/193 (11%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
K A E F A+E + A +L ++ + G A A A GD QY L
Sbjct: 635 KQAAEWFRRAMEG--GDASAPRYLGLMYANGNGVGKDYAKAAECFRIAGERGDAWGQYNL 692
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G Q +A + KAV+Q A + LG +Y G V +D A A + RA
Sbjct: 693 GVLYYGGEGVKQDYGKAVEWYCKAVEQGLASAEFNLGLMYEQGCGVARDYAKAAELYRRA 752
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFE 248
+E+G A A G +G V + N+E+ KA EQ +
Sbjct: 753 AEQGDAAAQCNLGFFYSKGWGVKQN-----------------NIEAEKW--YHKAAEQGD 793
Query: 249 VAAQAGCNLGLRW 261
AQ CNLGL +
Sbjct: 794 ATAQ--CNLGLMY 804
>gi|429749503|ref|ZP_19282622.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429168040|gb|EKY09901.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 783
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ A G+PDAQY +G +S+++A + EKA + +P A Y LG Y G+
Sbjct: 201 LMKVAEKGNPDAQYTIGMAYLEGKGGQKSEEKAIEWFEKAAAKGNPDAAYKLGNYYFYGN 260
Query: 173 C--VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
+ K A+ + RA+ KG+A A L G+
Sbjct: 261 SPLIPKFYKKAIEYYTRAAIKGNADAQRQLSVCLYNGI 298
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A++ + A+Y L + + + A AAN G+ DAQ +L R Q
Sbjct: 64 AESGDAKAQYQLGQCYFTGQGVAKSEEKAAEWFEKAANGGNVDAQRQLALCYRDGKGVAQ 123
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
S ++ + +IEK D+ P L Y TGD V KD+ A +A+ KG+
Sbjct: 124 STEKYYQWIEKNADKESPEVQLALAKAYQTGDGVAKDLQKARSWAQKAAAKGN 176
>gi|428176073|gb|EKX44959.1| hypothetical protein GUITHDRAFT_139250 [Guillardia theta CCMP2712]
Length = 467
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ AA GD +AQ +LG + V+ D ++F KA ++ HP ALY +G + G
Sbjct: 23 LLKAAEAGDTNAQNDLGDIYYDGTEGVEKDLPRSFELFMKAAEKGHPAALYSVGWAFYAG 82
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ 209
+ V ++ A F +A+E GH A +L G +
Sbjct: 83 EGVTQNHPQAAEWFEKATEAGHPKAMRNLAKMLFFGSE 120
>gi|333368363|ref|ZP_08460569.1| hypothetical protein HMPREF9373_0974 [Psychrobacter sp. 1501(2011)]
gi|332977421|gb|EGK14198.1| hypothetical protein HMPREF9373_0974 [Psychrobacter sp. 1501(2011)]
Length = 423
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 83 NSNTHARYWLSKLHLKYHVP-GACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYV 139
N N A++ L + YH G K + A+ AA+ GD DAQY LG
Sbjct: 82 NGNADAQF---NLGVMYHEGRGVAKNITKAMQWYKKAADQGDKDAQYNLGILYENGIGIA 138
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q Q+A + KA Q A Y +G Y +G V D++ A+ + A++KG+ A
Sbjct: 139 QDYQEALKWYLKAAQQGDLHAQYKIGWFYESGHGVDPDMSKAIKWYLPAADKGNVDAQYT 198
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+L G VP+ K + AA + + NL
Sbjct: 199 MATLYDEGRGVPQDYNKALKWYLKAASQDYVDAYVNL 235
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
M A+ AA GD AQY LG +QA + +KA DQ A Y L
Sbjct: 287 MAASWYKKAAVKGDGQAQYSLGMLYDSGYGVEYDPRQAVAWYQKAADQGMAEAQYNLAMS 346
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
Y G+ V KD A+ + +A+++ + A+ G++ G V + ++
Sbjct: 347 YYLGEGVPKDFKKAIKWYTQAADQDYGKASYNLGTMYYNGDGVTQSCSE 395
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQ+ LG ++ +A + +KA DQ A Y LG +Y G +
Sbjct: 79 AAVNGNADAQFNLGVMYHEGRGVAKNITKAMQWYKKAADQGDKDAQYNLGILYENGIGIA 138
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D AL + +A+++G A G G V ++K + AA K + +
Sbjct: 139 QDYQEALKWYLKAAQQGDLHAQYKIGWFYESGHGVDPDMSKAIKWYLPAADKGNVDAQYT 198
Query: 236 L 236
+
Sbjct: 199 M 199
>gi|293403906|ref|ZP_06647900.1| ybeQ protein [Escherichia coli FVEC1412]
gi|293408770|ref|ZP_06652609.1| conserved hypothetical protein [Escherichia coli B354]
gi|298379682|ref|ZP_06989287.1| ybeQ protein [Escherichia coli FVEC1302]
gi|300901155|ref|ZP_07119260.1| Sel1 repeat protein [Escherichia coli MS 198-1]
gi|291428492|gb|EFF01517.1| ybeQ protein [Escherichia coli FVEC1412]
gi|291471948|gb|EFF14431.1| conserved hypothetical protein [Escherichia coli B354]
gi|298279380|gb|EFI20888.1| ybeQ protein [Escherichia coli FVEC1302]
gi|300355394|gb|EFJ71264.1| Sel1 repeat protein [Escherichia coli MS 198-1]
Length = 327
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD DAQY +G ++ D++AFY++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEKGDCDAQYIIGFYYNRDSAIDSPDDEKAFYWLRLAAEQGHCEAQYS 69
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G L RG
Sbjct: 70 LGQKYTEDKSRHKDNGQAIFWLKKAALQGHTFASNALGWTLDRG 113
>gi|397676938|ref|YP_006518476.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397627|gb|AFN56954.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 202
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+AN G DAQY LG +SD++A ++ +KA +Q + A LG Y G V
Sbjct: 113 SANQGIADAQYNLGLAYYNGAGMPKSDEKAVFWYQKAANQGYADAQLKLGAAYYFGKGVA 172
Query: 176 KDIASALWCFHRASEKGHAGA 196
+D +A + +A++KG+A A
Sbjct: 173 QDKGTAHFWIQQAADKGNAKA 193
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G DAQ +L Q ++A ++ +KA +Q GA +LLG Y GD V +
Sbjct: 42 AEAGYADAQLKLWAAYYSGEGVAQDKEKAVFWYQKAANQGDAGAQFLLGRAYYLGDGVSQ 101
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
D A++ + +++ +G A A G G +P+ K
Sbjct: 102 DYEKAVFWWQKSANQGIADAQYNLGLAYYNGAGMPKSDEK 141
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD AQ+ LG + + Q ++A ++ +K+ +Q A Y LG Y G +
Sbjct: 77 AANQGDAGAQFLLGRAYYLGDGVSQDYEKAVFWWQKSANQGIADAQYNLGLAYYNGAGMP 136
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
K A++ + +A+ +G+A A + G+ G V +
Sbjct: 137 KSDEKAVFWYQKAANQGYADAQLKLGAAYYFGKGVAQ 173
>gi|416233504|ref|ZP_11629333.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
12P80B1]
gi|326566543|gb|EGE16689.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
12P80B1]
Length = 237
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 75 FELALEADNSNTHAR---YWLSKLHLKYHVP----GACKAMGAALLVD----------AA 117
F+LA E HA+ +W H + V GA A G + D AA
Sbjct: 51 FDLAREYYQQGNHAKAFEWWQKSAHQGHAVAQTILGAMYAEGLGVRQDYHKAHEWYTKAA 110
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
N G AQY LG R + Q +A + KA Q A LG +Y G V++D
Sbjct: 111 NQGFAQAQYNLGQMYRQGHGVHQDYYKAVEWYTKAAHQGDAAAQSNLGVMYEQGLGVRQD 170
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKR 221
A F +A+ +GHAGA G + +G V + K AKR
Sbjct: 171 YHKAHEWFTKAAHQGHAGAQSNLGVMYSKGHGVRQ--NKSTAKR 212
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 19/166 (11%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A L A GD AQ++L + ++ + AF + +K+ Q H A +LG +Y
Sbjct: 36 ATLTRQAQNGDAVAQFDLAREYYQQGNHAK----AFEWWQKSAHQGHAVAQTILGAMYAE 91
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
G V++D A + +A+ +G A A G + +G V + K AA + A
Sbjct: 92 GLGVRQDYHKAHEWYTKAANQGFAQAQYNLGQMYRQGHGVHQDYYKAVEWYTKAAHQGDA 151
Query: 231 NLESNLMNPVE----------KAKEQFEVAAQAG-----CNLGLRW 261
+SNL E KA E F AA G NLG+ +
Sbjct: 152 AAQSNLGVMYEQGLGVRQDYHKAHEWFTKAAHQGHAGAQSNLGVMY 197
>gi|329123578|ref|ZP_08252140.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
gi|327470320|gb|EGF15780.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
Length = 189
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ+ LG Q D +A + KA DQ + GA LG +Y G VK
Sbjct: 25 AAEQGHAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGVMYANGRGVK 84
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT------KLNAKRVSAAKKAR 229
+D A+ + +A E+G+A A GS G V + T K A+ SA + +
Sbjct: 85 QDYFKAVKWYRKAVEQGYANAQANLGSAYSAGRGVRQDYTEAVKWFKKAAENGSADGQFK 144
Query: 230 ANLESNLMNPVEK----AKEQFEVAAQAGCNLGLRWLQRIEEEEK 270
L + ++K AKE F A G G + ++ E+
Sbjct: 145 LGLVYLIGQGIQKDRTFAKEWFGKACDNGNQDGCEYYGKLNRGER 189
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q D +A + KA +Q H A + LG +Y G VK+D A+ + +A+++G+AGA +
Sbjct: 13 QDDFEAVKWFRKAAEQGHAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMN 72
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G + G V + K A ++ AN ++NL
Sbjct: 73 LGVMYANGRGVKQDYFKAVKWYRKAVEQGYANAQANL 109
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+G +Y G VK+D A+ F +A+E+GHA A + G++ G+ V +
Sbjct: 1 MGVIYAKGQGVKQDDFEAVKWFRKAAEQGHAEAQFSLGNMYSDGIGVKQ 49
>gi|291539776|emb|CBL12887.1| FOG: TPR repeat, SEL1 subfamily [Roseburia intestinalis XB6B4]
Length = 265
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDY 138
AD N +A Y L +L+L K +G A+ L AAN + A Y LG +
Sbjct: 78 ADADNAYAWYRLGRLYL----SDEYKDIGRAVRYLTLAANRKNEFASYRLGKLYLAGEEV 133
Query: 139 VQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAA- 197
V++ + A Y+E++ + A Y+LG V L G V++D A F A+E+G+ AA
Sbjct: 134 VKNVELAIRYLEESAGVGNQYAQYVLGKVNLMGREVEQDKEKAYEYFRLAAEQGNVYAAY 193
Query: 198 -------IAYGSLLLRGVQVPECLTKLNAKRVSAAKKA-RANLESNLMNPVEKAK 244
+ + LLL ++ L K+ VS K RA ++ L ++ K
Sbjct: 194 FLEHWNDMPHPDLLLMATRLMHHLEKIMEDDVSGKKGGRRAGMDRKLARKIKNKK 248
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A+ G+ A Y LG +L + + + D ++AF+++ KA D + A Y LG +YL+ +
Sbjct: 41 ASEQGNSFADYALG-KLYTDGELIAKDMEKAFHHLHKAADADNAYAWYRLGRLYLSDEY- 98
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KDI A+ A+ + + A+ G L L G +V
Sbjct: 99 -KDIGRAVRYLTLAANRKNEFASYRLGKLYLAGEEV 133
>gi|218703978|ref|YP_002411497.1| hypothetical protein ECUMN_0738 [Escherichia coli UMN026]
gi|331662009|ref|ZP_08362932.1| putative TPR repeat protein [Escherichia coli TA143]
gi|417585444|ref|ZP_12236221.1| hypothetical protein ECSTECC16502_1055 [Escherichia coli
STEC_C165-02]
gi|419936486|ref|ZP_14453498.1| hypothetical protein EC5761_21796 [Escherichia coli 576-1]
gi|432352559|ref|ZP_19595845.1| hypothetical protein WCA_01532 [Escherichia coli KTE2]
gi|432400797|ref|ZP_19643552.1| hypothetical protein WEK_00967 [Escherichia coli KTE26]
gi|432424850|ref|ZP_19667367.1| hypothetical protein A139_00234 [Escherichia coli KTE181]
gi|432459672|ref|ZP_19701830.1| hypothetical protein A15I_00532 [Escherichia coli KTE204]
gi|432474710|ref|ZP_19716719.1| hypothetical protein A15Q_00888 [Escherichia coli KTE208]
gi|432521346|ref|ZP_19758504.1| hypothetical protein A17U_04344 [Escherichia coli KTE228]
gi|432536659|ref|ZP_19773578.1| hypothetical protein A195_00272 [Escherichia coli KTE235]
gi|432630275|ref|ZP_19866220.1| hypothetical protein A1UW_00645 [Escherichia coli KTE80]
gi|432639818|ref|ZP_19875659.1| hypothetical protein A1W1_00667 [Escherichia coli KTE83]
gi|432664885|ref|ZP_19900473.1| hypothetical protein A1Y3_01479 [Escherichia coli KTE116]
gi|432773831|ref|ZP_20008118.1| hypothetical protein A1SG_01909 [Escherichia coli KTE54]
gi|432884925|ref|ZP_20099605.1| hypothetical protein A31C_01307 [Escherichia coli KTE158]
gi|432910930|ref|ZP_20117494.1| hypothetical protein A13Q_01087 [Escherichia coli KTE190]
gi|433017617|ref|ZP_20205883.1| hypothetical protein WI7_00671 [Escherichia coli KTE105]
gi|433051967|ref|ZP_20239197.1| hypothetical protein WIK_00792 [Escherichia coli KTE122]
gi|433066889|ref|ZP_20253722.1| hypothetical protein WIQ_00786 [Escherichia coli KTE128]
gi|433157626|ref|ZP_20342495.1| hypothetical protein WKU_00703 [Escherichia coli KTE177]
gi|433177125|ref|ZP_20361580.1| hypothetical protein WGM_00794 [Escherichia coli KTE82]
gi|218431075|emb|CAR11951.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|331060431|gb|EGI32395.1| putative TPR repeat protein [Escherichia coli TA143]
gi|345340961|gb|EGW73377.1| hypothetical protein ECSTECC16502_1055 [Escherichia coli
STEC_C165-02]
gi|388401155|gb|EIL61817.1| hypothetical protein EC5761_21796 [Escherichia coli 576-1]
gi|430878757|gb|ELC02143.1| hypothetical protein WCA_01532 [Escherichia coli KTE2]
gi|430928564|gb|ELC49112.1| hypothetical protein WEK_00967 [Escherichia coli KTE26]
gi|430958759|gb|ELC77336.1| hypothetical protein A139_00234 [Escherichia coli KTE181]
gi|430991624|gb|ELD08027.1| hypothetical protein A15I_00532 [Escherichia coli KTE204]
gi|431009115|gb|ELD23739.1| hypothetical protein A15Q_00888 [Escherichia coli KTE208]
gi|431044854|gb|ELD55111.1| hypothetical protein A17U_04344 [Escherichia coli KTE228]
gi|431072976|gb|ELD80713.1| hypothetical protein A195_00272 [Escherichia coli KTE235]
gi|431173858|gb|ELE73928.1| hypothetical protein A1UW_00645 [Escherichia coli KTE80]
gi|431184774|gb|ELE84520.1| hypothetical protein A1W1_00667 [Escherichia coli KTE83]
gi|431203906|gb|ELF02495.1| hypothetical protein A1Y3_01479 [Escherichia coli KTE116]
gi|431320381|gb|ELG08023.1| hypothetical protein A1SG_01909 [Escherichia coli KTE54]
gi|431419404|gb|ELH01754.1| hypothetical protein A31C_01307 [Escherichia coli KTE158]
gi|431444279|gb|ELH25302.1| hypothetical protein A13Q_01087 [Escherichia coli KTE190]
gi|431536741|gb|ELI12898.1| hypothetical protein WI7_00671 [Escherichia coli KTE105]
gi|431575164|gb|ELI47911.1| hypothetical protein WIK_00792 [Escherichia coli KTE122]
gi|431590259|gb|ELI61355.1| hypothetical protein WIQ_00786 [Escherichia coli KTE128]
gi|431681378|gb|ELJ47167.1| hypothetical protein WKU_00703 [Escherichia coli KTE177]
gi|431709648|gb|ELJ74102.1| hypothetical protein WGM_00794 [Escherichia coli KTE82]
Length = 325
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD DAQY +G ++ D++AFY++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCDAQYIIGFYYNRDSAIDSPDDEKAFYWLRLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G L RG
Sbjct: 68 LGQKYTEDKSRHKDNGQAIFWLKKAALQGHTFASNALGWTLDRG 111
>gi|424741556|ref|ZP_18169901.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
gi|422944740|gb|EKU39723.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
Length = 266
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L A++ G +AQ +LG Q Q+AF Y + A +Q A Y LG +Y G
Sbjct: 66 LFQKASDQGLAEAQNDLGGMYFEGLGTTQDYQKAFKYFDSAANQKLAAAQYNLGLMYDKG 125
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTKLNAKRVSA 224
++KD AL + ++E+G+A A G+ G VP E +K + +
Sbjct: 126 LYIQKDRKKALELYELSTEQGYAKAQYNLGNAYANGDGVPQNNKKALELFSKAAEQNLPQ 185
Query: 225 AKKARANLESN---LMNPVEKAKEQFEVAAQAG 254
A N+ ++ + +KA E F AAQ G
Sbjct: 186 ASYNLGNMYADGEGVTQDNKKALEYFTKAAQQG 218
>gi|73964368|ref|XP_537530.2| PREDICTED: protein sel-1 homolog 1 [Canis lupus familiaris]
Length = 794
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|420160045|ref|ZP_14666835.1| Sel1 repeat protein [Capnocytophaga ochracea str. Holt 25]
gi|394761185|gb|EJF43611.1| Sel1 repeat protein [Capnocytophaga ochracea str. Holt 25]
Length = 256
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A AA G +AQ +LG QSD+QA + +KA DQ A LG Y
Sbjct: 89 AYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYY 148
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V + + A+ + +A+ +G A GS +G +P+ TK
Sbjct: 149 KGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTK 195
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +Q +LG VQS ++A Y+ +KA +Q + A LG Y G VK
Sbjct: 59 AAKQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVK 118
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ A+ F +A+++ A A G +G+ V +
Sbjct: 119 QSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQ 155
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD +AQ LG QS +A ++ EKA +Q A +LG Y G V
Sbjct: 167 AANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVD 226
Query: 176 KDIASALWCFHRA 188
K A++ F +
Sbjct: 227 KSQKRAIYWFEKG 239
>gi|340363634|ref|ZP_08685957.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339885313|gb|EGQ75042.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 420
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G +AQY LG R Q+D++A + KA +Q A Y LG +Y G
Sbjct: 145 LQKAAEQGSVNAQYNLGLRYEQGQGVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANGR 204
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLL--RGV 208
V+++ A+ + +A+E+G A A G + RGV
Sbjct: 205 GVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANRRGV 242
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD DAQ LG Q +A + KA ++ + A LG Y G V+
Sbjct: 256 AAEQGDVDAQNNLGALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVR 315
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV----PECL 214
+D AL + +A+E G A A G + G V PE L
Sbjct: 316 QDYPEALRWYRKAAEHGFAAAQHNLGEMYYEGKGVHQNYPEAL 358
>gi|147667694|gb|ABQ45813.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+A A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVK 156
>gi|410962775|ref|XP_003987944.1| PREDICTED: protein sel-1 homolog 1 [Felis catus]
Length = 795
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 405 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 464
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 465 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 500
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 404 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 462
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 463 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 519
>gi|456737264|gb|EMF61971.1| Hypothetical protein EPM1_0930 [Stenotrophomonas maltophilia EPM1]
Length = 144
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
L + V D+ ++ +F +++A ++ + A++ +G LTGD V++D+ A F R
Sbjct: 27 LSSSMPVGEDHAHAEADSFATLKQAAEKGYIPAIHAVGLCLLTGDRVEQDVMRAAAHFER 86
Query: 188 ASEKGHAGAAIAYGSLLLRGV----QVPECLTKLNAKRVSAAKKARANL 232
ASE G+ A +G L G+ VP + + A S + AR L
Sbjct: 87 ASEAGYPSAMYEFGLALFHGMGVARDVPHAVYLIRASAQSGNEYAREFL 135
>gi|332223462|ref|XP_003260889.1| PREDICTED: protein sel-1 homolog 1 [Nomascus leucogenys]
Length = 794
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 403 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 461
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 462 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 518
>gi|291406675|ref|XP_002719662.1| PREDICTED: sel-1 suppressor of lin-12-like isoform 1 [Oryctolagus
cuniculus]
Length = 794
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 403 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 461
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 462 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 518
>gi|420524363|ref|ZP_15022772.1| tetratricopeptide repeat family protein [Helicobacter pylori Hp
P-13b]
gi|393132460|gb|EJC32880.1| tetratricopeptide repeat family protein [Helicobacter pylori Hp
P-13b]
Length = 256
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDMPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVP-------ECLTK 216
A I G + + G+ VP EC K
Sbjct: 134 TNAYINLGIMYMEGMGVPSNYAKATECFRK 163
>gi|420409143|ref|ZP_14908296.1| cysteine-rich protein X [Helicobacter pylori NQ4216]
gi|393022417|gb|EJB23540.1| cysteine-rich protein X [Helicobacter pylori NQ4216]
Length = 256
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+A A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVK 156
>gi|350587106|ref|XP_003128729.2| PREDICTED: protein sel-1 homolog 1-like [Sus scrofa]
Length = 713
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 403 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 461
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 462 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 518
>gi|198282264|ref|YP_002218585.1| Sel1 domain-containing protein repeat-containing protein
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667000|ref|YP_002424627.1| hypothetical protein AFE_0117 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|415958416|ref|ZP_11557546.1| hypothetical protein GGI1_00470 [Acidithiobacillus sp. GGI-221]
gi|198246785|gb|ACH82378.1| Sel1 domain protein repeat-containing protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218519213|gb|ACK79799.1| conserved domain protein [Acidithiobacillus ferrooxidans ATCC
23270]
gi|339832537|gb|EGQ60447.1| hypothetical protein GGI1_00470 [Acidithiobacillus sp. GGI-221]
Length = 294
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD A+ LG N ++ +A Y+ KA DQ +P A LG Y GD VK
Sbjct: 199 AAAQGDASAENNLGVAYNYGNGVDKNFSRAVYWYRKAADQGNPSAQTNLGVAYYQGDGVK 258
Query: 176 KDIASALWCFHRASEKGHA 194
AL + +A+++G A
Sbjct: 259 SSTTEALHWWTKAAKQGDA 277
>gi|417404664|gb|JAA49074.1| Putative extracellular protein sel-1 [Desmodus rotundus]
Length = 794
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|237745488|ref|ZP_04575968.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229376839|gb|EEO26930.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 350
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
PDA+Y LG + Q +A ++ KA P A Y LG +Y G V+K+ +
Sbjct: 193 PDAEYNLGVMYALGKGTRQDFGEALKWLRKAAMHQLPEAQYGLGVMYARGLGVEKNPEQS 252
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVE 241
+ F +A+++G+ A G L G VP K AA+K A + NL E
Sbjct: 253 AYWFGKAAKQGYLKAQNKMGVLYTEGTGVPRDEAKAFRWFTRAAEKGYAKAQYNLGILYE 312
Query: 242 KAK 244
K
Sbjct: 313 NGK 315
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G L+ +AN G AQ LG N + +AF + KA Q +P A Y LG +Y
Sbjct: 144 GLQLITRSANRGFARAQNYLGVMYYEGNGVEPNSDRAFEWYGKAAVQNYPDAEYNLGVMY 203
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G ++D AL +A+ A G + RG+ V
Sbjct: 204 ALGKGTRQDFGEALKWLRKAAMHQLPEAQYGLGVMYARGLGV 245
>gi|383934141|ref|ZP_09987583.1| hypothetical protein RNAN_0643 [Rheinheimera nanhaiensis E407-8]
gi|383704597|dbj|GAB57674.1| hypothetical protein RNAN_0643 [Rheinheimera nanhaiensis E407-8]
Length = 717
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 63/163 (38%), Gaps = 41/163 (25%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLH------------------- 157
A GD DAQ+ LG R Q DQQA + +KA Q H
Sbjct: 556 AEQGDADAQFNLGLRYETGRGVRQDDQQAVAWYQKAAGQNHLRAIAHLGYMYEKGYGVSL 615
Query: 158 -----------------PGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
P AL LG Y G VK D A+ F +A+E+G+A A
Sbjct: 616 DEKRALALYQQSLPAKVPRALTALGLFYKNGRLVKADDKRAVELFAQAAEQGYANAQYNL 675
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAKK----ARANLESNLMNP 239
G + G V + L K AA++ A+A L S L+NP
Sbjct: 676 GWMYEYGRGVAKDLVKARDLYQLAAEQSEPLAQAQL-SRLLNP 717
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 65 IPLLKTAKENFELALEADNSNTH-----------------ARYWLSKLHLKYHVPGACKA 107
+P+L A+ +F++ L A + A++ L+ L+ H +
Sbjct: 163 LPVLAVAEASFDVGLRAFGRQNYVDAYSHWYPLAQAGVVDAQFNLAALYANGHGVAVDDS 222
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
A AA G AQY+L Q D A Y+ +KA Q H A Y LG +
Sbjct: 223 AATAWFNAAAEQGLAQAQYQLALAHANGKGVAQDDALAVYWYQKAAAQQHVLAQYNLGFM 282
Query: 168 YLTGDCVKKDIASALWCFHRASEKG 192
Y G V +D ASAL + RA+ +G
Sbjct: 283 YANGRGVTQDEASALLWYERAANQG 307
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 71 AKENFELALEADNSNTHAR------YWLSKLHLKYHVP-----GACKAMGAALLVD---- 115
A+ ++LAL N A+ YW K + HV G A G + D
Sbjct: 237 AQAQYQLALAHANGKGVAQDDALAVYWYQKAAAQQHVLAQYNLGFMYANGRGVTQDEASA 296
Query: 116 ------AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AAN GD DAQY + R + +A + ++A++Q H A + L YL
Sbjct: 297 LLWYERAANQGDVDAQYIVAGRYQTGRGAPVDINKAIGWYQRALEQGHSRAGFQLAQFYL 356
Query: 170 TGDCVKKDIASALWCFHRASEKG 192
TG V K+ A ++RA+ +G
Sbjct: 357 TGQGVSKNENRAFDLYNRAAAQG 379
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
GA LL AAN G+ +AQ+ LG L + AF ++ KA +Q H A YL G
Sbjct: 440 GAQLLQRAANEGNSEAQFRLGVMLSQGQGVAVDETAAFGWLLKAAEQGHAEAQYLTGLRL 499
Query: 169 LTGDCVKKDIASALWCFHRASEKG 192
G ++ A A+ + A+E+G
Sbjct: 500 ANGTGTAQNDAEAVKWYRAAAEQG 523
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q D+QA Y+ K +Q A + LG Y TG V+
Sbjct: 519 AAEQGVLYAQYNLGFMYGAGRGVAQDDEQALYWYTKVAEQGDADAQFNLGLRYETGRGVR 578
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A+ + +A+ + H A G + +G V
Sbjct: 579 QDDQQAVAWYQKAAGQNHLRAIAHLGYMYEKGYGV 613
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA G +AQY G RL Q+D +A + A +Q A Y LG +Y G
Sbjct: 480 LLKAAEQGHAEAQYLTGLRLANGTGTAQNDAEAVKWYRAAAEQGVLYAQYNLGFMYGAGR 539
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYG 201
V +D AL+ + + +E+G A A G
Sbjct: 540 GVAQDDEQALYWYTKVAEQGDADAQFNLG 568
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY LG Q + A + E+A +Q A Y++ Y TG DI A+
Sbjct: 275 AQYNLGFMYANGRGVTQDEASALLWYERAANQGDVDAQYIVAGRYQTGRGAPVDINKAIG 334
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ RA E+GH+ A L G V +
Sbjct: 335 WYQRALEQGHSRAGFQLAQFYLTGQGVSK 363
>gi|338720030|ref|XP_001494914.3| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1 isoform 1
[Equus caballus]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 403 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 461
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 462 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 518
>gi|160873605|ref|YP_001552921.1| Sel1 domain-containing protein [Shewanella baltica OS195]
gi|378706845|ref|YP_005271739.1| Sel1 domain-containing protein repeat-containing protein
[Shewanella baltica OS678]
gi|418025719|ref|ZP_12664696.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
OS625]
gi|160859127|gb|ABX47661.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
OS195]
gi|315265834|gb|ADT92687.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
OS678]
gi|353534980|gb|EHC04545.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
OS625]
Length = 511
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 48/112 (42%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
M A L A GD QYELG + QA + EKA Q HP A Y LG +
Sbjct: 127 MLEAQLKSNAEAGDAAFQYELGLLYERQPLLDPDATQAIDWFEKAAAQQHPDADYHLGAL 186
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
Y V D A A F +A+ G A G++LL G P+ + + A
Sbjct: 187 YWHDKRVTSDFAKARQYFEKAAANGDELAKEHLGNMLLAGQGGPKDVARAEA 238
>gi|431839185|gb|ELK01112.1| Protein sel-1 like protein 1 [Pteropus alecto]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 403 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 461
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 462 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 518
>gi|351694360|gb|EHA97278.1| sel-1-like protein 1 [Heterocephalus glaber]
Length = 793
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 403 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 462
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 463 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 498
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 402 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 460
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 461 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 517
>gi|183233344|ref|XP_651501.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169801621|gb|EAL46113.2| hypothetical protein EHI_178100 [Entamoeba histolytica HM-1:IMSS]
gi|449709974|gb|EMD49133.1| protein kinase domain containing protein [Entamoeba histolytica
KU27]
Length = 1079
Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHL-KYHVPGACKAMGAAL--LVDAANMGDPDAQYE 127
AK+ +E+A + NSN+ A+ ++L L +Y + + AL L A+ G+ DA Y
Sbjct: 831 AKKCYEIA--SLNSNSEAQSKYAQLLLDEYRYTKNEETLNEALDMLDKASKNGNADAMYN 888
Query: 128 LG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
G C + + ++ +AF + A + HP +LY+LG +Y G V +D A+
Sbjct: 889 YGLCFYKGFGNLKKNQIKAFDLFKAAAFKKHPDSLYILGVMYYKGKYVFEDKTLAMEYIT 948
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
+A+E + A G RG+ P + K V A+K
Sbjct: 949 KAAELHNHRALFHIGMCFFRGIGKPLDVDKAMEFFVEASK 988
>gi|6851089|gb|AAF29413.1|AF052059_1 SEL1L [Homo sapiens]
gi|17646138|gb|AAL40905.1| sel-1 [Homo sapiens]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|421587990|ref|ZP_16033327.1| hemaglutinin protein [Rhizobium sp. Pop5]
gi|403707383|gb|EJZ22400.1| hemaglutinin protein [Rhizobium sp. Pop5]
Length = 1257
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + V DQ QA + + + D+ A Y LG++Y G
Sbjct: 978 LADAARSGDTLALFEIGARYSDGRNGVTVDQKQAASWYQLSADKGFAPAQYRLGSMYEKG 1037
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DI A + +A+ +G+A A A+ Y S
Sbjct: 1038 NGVERDINKAKGFYEQAANQGNASAMHNLAVLYAS 1072
>gi|354477646|ref|XP_003501030.1| PREDICTED: protein sel-1 homolog 1 isoform 2 [Cricetulus griseus]
Length = 744
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 354 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 413
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 414 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 449
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 347 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 403
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 404 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 463
Query: 189 SEKGH 193
S+ GH
Sbjct: 464 SQGGH 468
>gi|332842879|ref|XP_510102.3| PREDICTED: protein sel-1 homolog 1 [Pan troglodytes]
gi|397475013|ref|XP_003808949.1| PREDICTED: protein sel-1 homolog 1 [Pan paniscus]
gi|410214600|gb|JAA04519.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410214602|gb|JAA04520.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410255208|gb|JAA15571.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410255210|gb|JAA15572.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410299030|gb|JAA28115.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410355707|gb|JAA44457.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410355709|gb|JAA44458.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|281351393|gb|EFB26977.1| hypothetical protein PANDA_006801 [Ailuropoda melanoleuca]
Length = 762
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 372 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 431
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 432 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 467
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 365 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 421
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 422 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 481
Query: 189 SEKGH 193
S+ GH
Sbjct: 482 SQGGH 486
>gi|237746753|ref|ZP_04577233.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229378104|gb|EEO28195.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 230
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAA--LLVDAANMGDPDAQYELGCRLRV 134
L A N A Y L +HL+ G + + A + AA DP AQY+LG
Sbjct: 52 FQLAAKEGNKDALYNLGHMHLQ--GKGTQQNLTEARNCFLQAAQKADPGAQYQLGNLYYY 109
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
+ Q A+ + KA Q + ALY LGT++ G V K+ A F +A+E+G A
Sbjct: 110 GYGIPKDCQTAYKWYMKAAGQHYTPALYALGTLHEEGCGVSKNPYKATMRFRQAAERGDA 169
Query: 195 GAAIAYGSLLLRGV 208
A G G
Sbjct: 170 RAQYQIGYRYFTGY 183
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+AF++ + A + + ALY LG ++L G ++++ A CF +A++K GA G+L
Sbjct: 47 KAFHFFQLAAKEGNKDALYNLGHMHLQGKGTQQNLTEARNCFLQAAQKADPGAQYQLGNL 106
Query: 204 LLRGVQVP-ECLT 215
G +P +C T
Sbjct: 107 YYYGYGIPKDCQT 119
>gi|380787275|gb|AFE65513.1| protein sel-1 homolog 1 isoform 1 precursor [Macaca mulatta]
gi|383410365|gb|AFH28396.1| protein sel-1 homolog 1 precursor [Macaca mulatta]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|296215648|ref|XP_002754215.1| PREDICTED: protein sel-1 homolog 1 [Callithrix jacchus]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|126738261|ref|ZP_01753982.1| Sel1-like repeat protein [Roseobacter sp. SK209-2-6]
gi|126720758|gb|EBA17463.1| Sel1-like repeat protein [Roseobacter sp. SK209-2-6]
Length = 782
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN G P A+ +LG QSD QA + KA + HP Y LG +Y G V
Sbjct: 545 AANQGYPVAETQLGWMYEKGRAVPQSDTQAVAWYRKAANHDHPRGQYNLGWMYENGRGVA 604
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
++ +A + +++A+ HA A G + G
Sbjct: 605 ENDDTARFWYNKAARSDHAAAQYRLGVMFQEG 636
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GDP AQ LG R QSD +A + A +Q +P A LG +Y G V
Sbjct: 509 AAGAGDPTAQTNLGIIYRNGQGVSQSDSEAVRWFRFAANQGYPVAETQLGWMYEKGRAVP 568
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ A+ + +A+ H G + G V E
Sbjct: 569 QSDTQAVAWYRKAANHDHPRGQYNLGWMYENGRGVAE 605
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 124 AQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
AQY LG + Q+D +A ++ +A DQ H A LG +Y G V + + AL
Sbjct: 625 AQYRLGVMFQEGRGGTQNDTEAAQWLRRAADQQHARAQTYLGWMYERGKGVTQSDSQALA 684
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ RA+ + A + G +G V +
Sbjct: 685 WYRRAAALDNPSANLNLGVFYEQGRGVTQ 713
>gi|19923669|ref|NP_005056.3| protein sel-1 homolog 1 isoform 1 precursor [Homo sapiens]
gi|62512184|sp|Q9UBV2.3|SE1L1_HUMAN RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|6518495|dbj|BAA87904.1| TSA305 [Homo sapiens]
gi|6683458|dbj|BAA89204.1| TSA305 [Homo sapiens]
gi|119601750|gb|EAW81344.1| sel-1 suppressor of lin-12-like (C. elegans) [Homo sapiens]
gi|225000728|gb|AAI72282.1| Sel-1 suppressor of lin-12-like (C. elegans) [synthetic construct]
gi|225000928|gb|AAI72577.1| Sel-1 suppressor of lin-12-like (C. elegans) [synthetic construct]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|426377678|ref|XP_004055587.1| PREDICTED: protein sel-1 homolog 1 [Gorilla gorilla gorilla]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|84875513|ref|NP_001034178.1| protein sel-1 homolog 1 isoform a precursor [Mus musculus]
gi|13878771|sp|Q9Z2G6.2|SE1L1_MOUSE RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|12836653|dbj|BAB23750.1| unnamed protein product [Mus musculus]
Length = 790
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 400 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 459
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 460 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 495
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 393 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 449
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 450 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 509
Query: 189 SEKGH 193
S+ GH
Sbjct: 510 SQGGH 514
>gi|301765876|ref|XP_002918357.1| PREDICTED: protein sel-1 homolog 1-like [Ailuropoda melanoleuca]
Length = 794
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 403 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 461
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 462 GVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 518
>gi|296448492|ref|ZP_06890372.1| Sel1 domain protein repeat-containing protein [Methylosinus
trichosporium OB3b]
gi|296253991|gb|EFH01138.1| Sel1 domain protein repeat-containing protein [Methylosinus
trichosporium OB3b]
Length = 384
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
A + D A+ GD AQ+ELG R + + AF +I+K+ +Q A Y LG+ Y
Sbjct: 162 ATIRDLASSGDAAAQFELGSRYADGRGVGRDAKAAFQWIQKSAEQGLAPAQYRLGSFYEK 221
Query: 171 GDCVKKDIASALWCFHRASEKGHA 194
G V +D A + RA++ G+A
Sbjct: 222 GLGVDRDYVQARGWYQRAAQAGNA 245
>gi|52842435|ref|YP_096234.1| hypothetical protein lpg2222 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778123|ref|YP_005186561.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629546|gb|AAU28287.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508938|gb|AEW52462.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 375
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA++G+ AQY LG + + D V D Q+A Y EKA +Q H + LG +Y +G
Sbjct: 189 AADLGNASAQYNLGL-MYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLG 247
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K D+ A + + ++++ G+A A + G V + L
Sbjct: 248 KSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSL 287
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVP-GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N A+ L+ + + P G KA AA+ + D QY LG
Sbjct: 83 ANQGNVDAQVLLAGFYWYLNTPEGYKKAF--EWYQKAADQNNADGQYGLGYMYDTGTGVP 140
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q+ A + +KA +Q + A +G Y TG VKKD AL + +A++ G+A A
Sbjct: 141 QNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYN 200
Query: 200 YGSLLLRGVQVPECLTK 216
G + +G VP+ K
Sbjct: 201 LGLMYEQGDGVPKDYQK 217
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 69/171 (40%), Gaps = 9/171 (5%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLH-LKYHVP-GACKAMGAALLVDAANMGDPDAQ 125
E ++ A E AD +N +Y L ++ VP + AM AA G+ +A
Sbjct: 105 EGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAM--VWYKKAAEQGNSNAA 162
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+G + QA + KA D + A Y LG +Y GD V KD A F
Sbjct: 163 LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYF 222
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A+ +GHA + + G L G L K +A AN + NL
Sbjct: 223 EKAANQGHAKSQLELGYLYDSGKLGKSDLQKAAFWYQKSADLGNANAQFNL 273
>gi|344274094|ref|XP_003408853.1| PREDICTED: protein sel-1 homolog 1 [Loxodonta africana]
Length = 792
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 402 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 461
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 462 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 497
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 395 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 451
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 452 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 511
Query: 189 SEKGH 193
S+ GH
Sbjct: 512 SQGGH 516
>gi|288941531|ref|YP_003443771.1| Sel1 domain-containing protein repeat-containing protein
[Allochromatium vinosum DSM 180]
gi|288896903|gb|ADC62739.1| Sel1 domain protein repeat-containing protein [Allochromatium
vinosum DSM 180]
Length = 224
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ----QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD AQY+ G L V+N + S+ +A +I KA +Q H A +LG +Y G
Sbjct: 61 AAESGDAGAQYQFGMNL-VQNAWQHSEPLAMIEAVDWIRKAAEQEHVNAQLMLGALYEKG 119
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ +D A + RA+++G+A A G + RG V + L +
Sbjct: 120 RGLIQDYELAYDWYRRAAQQGNALAMERLGLMFARGRGVEQDLEQ 164
>gi|237748264|ref|ZP_04578744.1| LOW QUALITY PROTEIN: Sel1 repeat-containing protein [Oxalobacter
formigenes OXCC13]
gi|229379626|gb|EEO29717.1| LOW QUALITY PROTEIN: Sel1 repeat-containing protein [Oxalobacter
formigenes OXCC13]
Length = 311
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L +++A +P QY +G + Q ++AF + A + + A Y +G +Y G
Sbjct: 100 LFLESARQNNPRGQYGMGTMYDLGLIVKQDKEKAFKWYMYAAENGYKNAQYNIGIMYARG 159
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
K+D A + +A +GH GA G L RG P+ K AAK
Sbjct: 160 RGTKRDYKKAREWYEKAVLQGHKGAMTNLGLLYYRGWGGPKDYAKSAELNTRAAK 214
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
+PD Q LG R + Q+AF ++ Q +P Y +GT+Y G VK+D
Sbjct: 73 NPDVQAALGYMYREGLAVPKDIQKAFDLFLESARQNNPRGQYGMGTMYDLGLIVKQDKEK 132
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRG 207
A + A+E G+ A G + RG
Sbjct: 133 AFKWYMYAAENGYKNAQYNIGIMYARG 159
>gi|397667881|ref|YP_006509418.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395131292|emb|CCD09555.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 375
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA++G+ AQY LG + + D V D Q+A Y EKA +Q H + LG +Y +G
Sbjct: 189 AADLGNASAQYNLGL-MYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLG 247
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K D+ A + + ++++ G+A A + G V + L
Sbjct: 248 KSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSL 287
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVP-GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N A+ L+ + + P G KA AA+ + D QY LG
Sbjct: 83 ANQGNVDAQVLLAGFYWYLNTPEGYKKAF--EWYQKAADQNNADGQYGLGYMYDTGTGVP 140
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q+ A + +KA +Q + A +G Y TG VKKD AL + +A++ G+A A
Sbjct: 141 QNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYN 200
Query: 200 YGSLLLRGVQVPECLTK 216
G + +G VP+ K
Sbjct: 201 LGLMYEQGDGVPKDYQK 217
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 69/171 (40%), Gaps = 9/171 (5%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLH-LKYHVP-GACKAMGAALLVDAANMGDPDAQ 125
E ++ A E AD +N +Y L ++ VP + AM AA G+ +A
Sbjct: 105 EGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAM--VWYKKAAEQGNSNAA 162
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+G + QA + KA D + A Y LG +Y GD V KD A F
Sbjct: 163 LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYF 222
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A+ +GHA + + G L G L K +A AN + NL
Sbjct: 223 EKAANQGHAKSQLELGYLYDSGKLGKSDLQKAAFWYQKSADLGNANAQFNL 273
>gi|109084486|ref|XP_001105925.1| PREDICTED: protein sel-1 homolog 1-like [Macaca mulatta]
Length = 794
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|403264818|ref|XP_003924668.1| PREDICTED: protein sel-1 homolog 1 [Saimiri boliviensis
boliviensis]
Length = 795
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 405 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 464
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 465 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 500
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 398 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 454
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 455 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 514
Query: 189 SEKGH 193
S+ GH
Sbjct: 515 SQGGH 519
>gi|402876881|ref|XP_003902180.1| PREDICTED: protein sel-1 homolog 1 [Papio anubis]
gi|355693487|gb|EHH28090.1| hypothetical protein EGK_18436 [Macaca mulatta]
Length = 794
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|354594573|ref|ZP_09012612.1| TPR repeat SEL1 subfamily [Commensalibacter intestini A911]
gi|353672249|gb|EHD13949.1| TPR repeat SEL1 subfamily [Commensalibacter intestini A911]
Length = 340
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
AN G+P+AQY +G Q+ +A + EKA Q A + LG +Y G V +
Sbjct: 36 ANQGNPEAQYNIGVMYDQGIGVPQNGNKAVEWYEKAAKQRLYQAEFNLGVLYDEGIIVPQ 95
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D + A+ + +A+++G A + G + +G +P+
Sbjct: 96 DYSKAIQYYTQAAQQGDDQAMVNLGGMYRKGSGIPK 131
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A MGD +A LG ++ + A +Y +KA + + ALY LG +Y GD V
Sbjct: 179 AIQMGDDEALASLGVLYEQGLGVKKNTKTAIHYFQKAAQKNNKKALYNLGRIYREGDGVP 238
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
K+ A+ + +A+++G A A G + G V + K AA K + N
Sbjct: 239 KNYTKAIQYYQKAAQQGDASALSDLGVMYSHGTGVAKDTKKAVEYTQKAADKNDPTAQFN 298
Query: 236 L 236
L
Sbjct: 299 L 299
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
QS +A Y +KA+ AL LG +Y G VKK+ +A+ F +A++K + A
Sbjct: 167 QSYAKAIEYYQKAIQMGDDEALASLGVLYEQGLGVKKNTKTAIHYFQKAAQKNNKKALYN 226
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G + G VP+ TK AA++ A+ S+L
Sbjct: 227 LGRIYREGDGVPKNYTKAIQYYQKAAQQGDASALSDL 263
>gi|429745684|ref|ZP_19279087.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429168386|gb|EKY10223.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 278
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A AA G +AQ +LG QS++QA + +KA DQ A LG Y
Sbjct: 111 AYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSNEQAVLWFQKAADQDFAEAQSFLGYCYY 170
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V + + A++ + +A+ +G A GS +G +P+ TK
Sbjct: 171 KGLGVAQSDSDAVFWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTK 217
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD +Q +LG VQS ++A Y+ +KA +Q + A LG Y G VK
Sbjct: 81 AAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVK 140
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+ A+ F +A+++ A A G +G+ V +
Sbjct: 141 QSNEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQ 177
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AAN GD +AQ LG QS +A ++ EKA +Q A +LG Y G V
Sbjct: 189 AANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVD 248
Query: 176 KDIASALWCFHRA 188
K A++ F +
Sbjct: 249 KSQKRAIYWFEKG 261
>gi|348573207|ref|XP_003472383.1| PREDICTED: protein sel-1 homolog 1-like [Cavia porcellus]
Length = 798
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 403 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 462
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 463 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 498
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 396 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 452
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 453 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 512
Query: 189 SEKGH 193
S+ GH
Sbjct: 513 SQGGH 517
>gi|315453979|ref|YP_004074249.1| Sel1 domain-containing protein [Helicobacter felis ATCC 49179]
gi|315133031|emb|CBY83659.1| Sel1 domain protein [Helicobacter felis ATCC 49179]
Length = 659
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 112 LLVDAANMGDPDAQYELGC-RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + AN GDPD +G + V+ + + QQA Y +KA D+ LG +Y
Sbjct: 292 LYQEVANAGDPDGYVHIGLLYIGVQGE--KGAQQALEYFQKATDKGSSWGYVELGNMYKD 349
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V +D A+ + + + G+A + SL L G VP+ TK
Sbjct: 350 GKGVAQDYQEAINYYKKGMQTGNALGYYSMASLYLEGKGVPKSPTK 395
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA++G D + +G + + Q D +A Y +KA+ + A L Y G VK
Sbjct: 403 AASLGKGDGWFYIGQMYEMGHGVKQDDAKAIQYYQKAIRKGSALAYERLANFYQNGRGVK 462
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D A A+ +H+A + G G L G V + +K
Sbjct: 463 QDYAKAMEFYHQAVKLGDIAGYAGMGQLYKNGYGVKQDYSK 503
>gi|54298117|ref|YP_124486.1| hypothetical protein lpp2174 [Legionella pneumophila str. Paris]
gi|53751902|emb|CAH13326.1| hypothetical protein lpp2174 [Legionella pneumophila str. Paris]
Length = 373
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA++G+ AQY LG + + D V D Q+A Y EKA +Q H + LG +Y +G
Sbjct: 187 AADLGNASAQYNLGL-MYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLG 245
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K D+ A + + ++++ G+A A + G V + L
Sbjct: 246 KSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSL 285
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVP-GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N A+ L+ + + P G KA AA+ + D QY LG
Sbjct: 81 ANQGNVDAQVLLAGFYWYLNTPEGYKKAF--EWYQKAADQNNADGQYGLGYMYDTGTGVP 138
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q+ A + +KA +Q + A +G Y TG VKKD AL + +A++ G+A A
Sbjct: 139 QNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYN 198
Query: 200 YGSLLLRGVQVPECLTK 216
G + +G VP+ K
Sbjct: 199 LGLMYEQGDGVPKDYQK 215
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 69/171 (40%), Gaps = 9/171 (5%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLH-LKYHVP-GACKAMGAALLVDAANMGDPDAQ 125
E ++ A E AD +N +Y L ++ VP + AM AA G+ +A
Sbjct: 103 EGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAM--VWYKKAAEQGNSNAA 160
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+G + QA + KA D + A Y LG +Y GD V KD A F
Sbjct: 161 LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYF 220
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A+ +GHA + + G L G L K +A AN + NL
Sbjct: 221 EKAANQGHAKSQLELGYLYDSGKLGKSDLQKAAFWYQKSADLGNANAQFNL 271
>gi|398350043|ref|YP_006395507.1| hypothetical protein USDA257_c01500 [Sinorhizobium fredii USDA 257]
gi|390125369|gb|AFL48750.1| hypothetical protein USDA257_c01500 [Sinorhizobium fredii USDA 257]
Length = 1228
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLL 164
+ G + LV AA GDP A YE+G R E + D +A + ++A D A Y L
Sbjct: 949 EGFGPSALVTAAKGGDPLAHYEIGTRF-TEGRGAKEDLAEAAKWYQRAADAGVVPAGYRL 1007
Query: 165 GTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+Y G V +D A A + +A+E G+A A+ +L G
Sbjct: 1008 ANLYEKGAGVTRDAAKAKALYQKAAEAGNASASHNLAVMLASG 1050
>gi|386754574|ref|YP_006227792.1| cysteine-rich protein X [Helicobacter pylori Shi112]
gi|384560832|gb|AFI01299.1| cysteine-rich protein X [Helicobacter pylori Shi112]
Length = 256
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRSVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|422680838|ref|ZP_16739109.1| hypothetical protein PSYTB_10888, partial [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|331010183|gb|EGH90239.1| hypothetical protein PSYTB_10888 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 357
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR----VEN 136
A+N + A+Y L +H +A G + ++A G+ DA+Y +G + E
Sbjct: 117 AENGDPVAQYKLGLIHFYGRGVDIDRAKGLQWVTESAERGNADAEYFMGTAITAGVATET 176
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
D+ Q+ + + KA +Q H A L ++Y G V+KD A RAS +G A A
Sbjct: 177 DFGQAAR----WFSKAAEQGHVKAQQKLASLYFNGGGVEKDDQEAFKWASRASAQGDAEA 232
Query: 197 AIAYGSLLL--RGVQV-PECLTKL 217
+ +L +G QV P+ KL
Sbjct: 233 KLLLATLYFYGKGTQVDPQHAVKL 256
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GDP AQY+LG + V D+ + ++ ++ ++ + A Y +GT G
Sbjct: 116 AAENGDPVAQYKLGL-IHFYGRGVDIDRAKGLQWVTESAERGNADAEYFMGTAITAGVAT 174
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ D A F +A+E+GH A SL G V
Sbjct: 175 ETDFGQAARWFSKAAEQGHVKAQQKLASLYFNGGGV 210
>gi|62510950|sp|Q80Z70.2|SE1L1_RAT RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
Length = 794
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|93006436|ref|YP_580873.1| hypothetical protein Pcryo_1612 [Psychrobacter cryohalolentis K5]
gi|92394114|gb|ABE75389.1| Sel1 [Psychrobacter cryohalolentis K5]
Length = 232
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ AQ+ +G + Q +A + KA DQ + A Y LG +Y G +K
Sbjct: 74 AAEQGNASAQFNIGWMYEHADGVSQDSVKAVEWYRKAADQGYGDAQYNLGWMYHNGRGIK 133
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+ +G AGA G + +G V + K + AA + A +++
Sbjct: 134 KDYDQAMDWYLKAAYQGDAGAQNNIGDMYEKGAGVSKDNVKAAKWYLKAANQGYALAQNS 193
Query: 236 L 236
L
Sbjct: 194 L 194
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
AN G AQ+ LG + Q +AF + +KA +Q + A + +G +Y D V +
Sbjct: 39 ANQGRASAQFNLGVMYDEGSGIAQDTAKAFEWYQKAAEQGNASAQFNIGWMYEHADGVSQ 98
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
D A+ + +A+++G+ A G + G + + + + AA + A ++N+
Sbjct: 99 DSVKAVEWYRKAADQGYGDAQYNLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNI 158
Query: 237 MNPVEKA 243
+ EK
Sbjct: 159 GDMYEKG 165
>gi|168334223|ref|ZP_02692424.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 433
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G L AA G AQY + R + Q + +A+ + EKA Q H ++Y LG +Y
Sbjct: 301 GIDWLRTAAENGYVYAQYHMALRYAAGDGIEQDEHKAWEWFEKAAAQGHAKSIYKLGKIY 360
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V+KD A C+ + ++K + A G + G V + TK
Sbjct: 361 TDGIIVEKDYEKAFNCYLQLAQKSNKDAQYKVGIAYMYGNGVEKDSTK 408
>gi|348026295|ref|YP_004766100.1| TPR repeat protein [Megasphaera elsdenii DSM 20460]
gi|341822349|emb|CCC73273.1| TPR repeat protein [Megasphaera elsdenii DSM 20460]
Length = 163
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 100 HVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPG 159
HV A K +G L+ +AA GD DAQ LG Y + ++ AF+Y KA +Q P
Sbjct: 28 HVRDADK-VGWMLIENAATQGDRDAQNYLGDAYFYS--YKKDEKAAFWYT-KAAEQGLPE 83
Query: 160 ALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG--AAIA---YGSLLLRGVQVPE 212
AL +LG +YL G V +D A F +A + AA+A G + G+ VP+
Sbjct: 84 ALAMLGMLYLLGRGVTRDYIKARQYFEQALQDNEVNVEAAVAQYWLGQMYKEGIGVPK 141
>gi|237747685|ref|ZP_04578165.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379047|gb|EEO29138.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 295
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
P+AQY LG V++D+Q+ Y+ KA + A LG +Y G ++KD A
Sbjct: 176 PEAQYGLGVMYSRGLGVVKNDEQSAYWFSKAARAGYLKAQNKLGILYSEGKGLEKDEKKA 235
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
F A+EKG+A A + +G+ V + ++K
Sbjct: 236 FHWFEAAAEKGYAKAQFNLAVMYDKGIGVAKDVSK 270
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G L++ +AN G AQ LG N+ Q ++AF + KA Q +P A Y L +Y
Sbjct: 91 GLNLIMKSANQGFARAQNYLGVTYYDGNEVEQDYKEAFDWYGKAAVQGYPDAEYNLAVMY 150
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G ++D + + +A+ A G + RG+ V
Sbjct: 151 GLGKGTRQDFSETIKWLRKAAMHQLPEAQYGLGVMYSRGLGV 192
>gi|373115770|ref|ZP_09529934.1| hypothetical protein HMPREF0995_00770 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371669928|gb|EHO35019.1| hypothetical protein HMPREF0995_00770 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 652
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 64 LIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGAC-KAMGAALLVDAANMGDP 122
LIP + A+ E A A+ A+Y L KL L P C + G L AA G+
Sbjct: 442 LIPDAEKARHWLEQA--AERELPQAQYALGKLLLS-DDPDVCDPSEGIRWLNAAAQNGND 498
Query: 123 DAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASAL 182
Y LG + +++ A Y+ +A + +P A YLLG +YL G+ V++D A
Sbjct: 499 YTAYALGKEYLQGDHVLKNANTAAEYLHQAAEAQNPWAQYLLGKLYLMGEGVEQDQEVAY 558
Query: 183 WCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
F A+ +GH A + + +G P L
Sbjct: 559 GWFQAAAMQGHTYAQF-FKERMEQGPPGPPSL 589
>gi|315498826|ref|YP_004087630.1| sel1 domain-containing protein repeat-containing protein
[Asticcacaulis excentricus CB 48]
gi|315416838|gb|ADU13479.1| Sel1 domain protein repeat-containing protein [Asticcacaulis
excentricus CB 48]
Length = 417
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ AA +GD DAQ+ELG D +AF + + Q + A Y LG +Y G+
Sbjct: 226 LIKAAKLGDDDAQFELGDVYYYGKDVEPDLAEAFKWFGLSAMQDNAEAQYSLGYMYFAGE 285
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++ D A F +A+++ A G + L+G+ V
Sbjct: 286 FLEADNDQAYKWFRKAADQDDGDAQYFVGYMFLKGLSV 323
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 121 DPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
+ +AQY LG + +++++D QA+ + KA DQ A Y +G ++L G VK A
Sbjct: 270 NAEAQYSLGY-MYFAGEFLEADNDQAYKWFRKAADQDDGDAQYFVGYMFLKGLSVKTSYA 328
Query: 180 SALWCFHRASEKGHAGAAIAYG 201
A F RA+ +GH A + G
Sbjct: 329 DAKSWFERAAMQGHGSAMLQLG 350
>gi|158341666|ref|NP_808794.2| protein sel-1 homolog 1 precursor [Rattus norvegicus]
gi|149025308|gb|EDL81675.1| Sel1 (suppressor of lin-12) 1 homolog (C. elegans), isoform CRA_a
[Rattus norvegicus]
Length = 793
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 403 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 462
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 463 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 498
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 396 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 452
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 453 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 512
Query: 189 SEKGH 193
S+ GH
Sbjct: 513 SQGGH 517
>gi|222055441|ref|YP_002537803.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221564730|gb|ACM20702.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 271
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
GA AA GD DAQ+ L C Q +A + KA Q P A +LG++Y
Sbjct: 138 GARWFRLAAEQGDVDAQFNLSCMYYNGWGVEQDKHEAAKWCMKAAAQGDPQAQCVLGSMY 197
Query: 169 LTGDCVKKDIASALWCFHRASEKGH 193
+ + VK+D+ A+ F R +E+G+
Sbjct: 198 VRNEGVKQDLKEAMRWFRRGAEQGN 222
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 79 LEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY 138
L A+ + A++ LS ++ K A + AA GDP AQ LG + V N+
Sbjct: 144 LAAEQGDVDAQFNLSCMYYNGWGVEQDKHEAAKWCMKAAAQGDPQAQCVLGS-MYVRNEG 202
Query: 139 VQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
V+ D ++A + + +Q +P A + L +Y G V+K++ A+ + +A+E+G
Sbjct: 203 VKQDLKEAMRWFRRGAEQGNPIAQHNLAVLYEDGKGVEKNLREAIKWYRQAAEQG 257
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+L+ AA G AQYELGC L + ++A + +A H A LG Y +
Sbjct: 68 SLIKKAARDGYAQAQYELGCMLFTGWGIEKDRREAIRWFLEAAGHHHAQAQNALGLAYSS 127
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
G+ V++D F A+E+G A + G V +
Sbjct: 128 GEGVRQDDTEGARWFRLAAEQGDVDAQFNLSCMYYNGWGVEQ 169
>gi|402772856|ref|YP_006592393.1| Sel1 domain-containing protein repeat-containing protein
[Methylocystis sp. SC2]
gi|401774876|emb|CCJ07742.1| Sel1 domain protein repeat-containing protein [Methylocystis sp.
SC2]
Length = 291
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLL 164
+A+ A L AA P A + LG + +EN+ SD +A+ Y +A + + +LY L
Sbjct: 111 RALARAYLEKAAAQDQPAALHLLG-EIALENEGAPSDFGRAYDYFRRAAAKGNADSLYAL 169
Query: 165 GTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
G +Y TG V KD A F R +E A A + + L GV P
Sbjct: 170 GVLYKTGRGVPKDEREAAEWFRRGAELDFAPAMVEFAVLQFNGVGAP 216
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
Y+EKA Q P AL+LLG + L + D A F RA+ KG+A + A G L G
Sbjct: 117 YLEKAAAQDQPAALHLLGEIALENEGAPSDFGRAYDYFRRAAAKGNADSLYALGVLYKTG 176
Query: 208 VQVPE 212
VP+
Sbjct: 177 RGVPK 181
>gi|354477644|ref|XP_003501029.1| PREDICTED: protein sel-1 homolog 1 isoform 1 [Cricetulus griseus]
gi|344249723|gb|EGW05827.1| Protein sel-1-like 1 [Cricetulus griseus]
Length = 794
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|261210648|ref|ZP_05924940.1| hypothetical protein VCJ_000901 [Vibrio sp. RC341]
gi|260840133|gb|EEX66713.1| hypothetical protein VCJ_000901 [Vibrio sp. RC341]
Length = 337
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ A DP AQY+L + + Q+ AFY+ +A +Q +P A+ + + Y+TG
Sbjct: 25 LMKLAKQNDPQAQYQLAIAYQTGSSTPQNLNDAFYWFLQAAEQNYPAAMAQVASAYMTGQ 84
Query: 173 CVKKDIASALWCFHRASEKGHAGAA 197
V KD + + + G+ A
Sbjct: 85 GVNKDAQQTQYWLTKLALSGNVRAT 109
>gi|148359764|ref|YP_001250971.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296107809|ref|YP_003619510.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila 2300/99 Alcoy]
gi|148281537|gb|ABQ55625.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila str. Corby]
gi|295649711|gb|ADG25558.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila 2300/99 Alcoy]
Length = 375
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA++G+ AQY LG + + D V D Q+A Y EKA +Q H + LG +Y +G
Sbjct: 189 AADLGNASAQYNLGL-MYEQGDGVPKDYQKAAEYFEKAANQDHAKSQLELGYLYDSGKLG 247
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K D+ A + + ++++ G+A A + G V + L
Sbjct: 248 KSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSL 287
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 81 ADNSNTHARYWLSKLHLKYHVP-GACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
A+ N A+ L+ + + P G KA AA+ + D QY LG
Sbjct: 83 ANQGNVDAQVLLAGFYWYLNTPDGYKKAF--EWYQKAADQNNADGQYGLGYMYDTGTGVP 140
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q+ A + +KA +Q + A +G Y TG VKKD AL + +A++ G+A A
Sbjct: 141 QNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYN 200
Query: 200 YGSLLLRGVQVPECLTK 216
G + +G VP+ K
Sbjct: 201 LGLMYEQGDGVPKDYQK 217
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 50/123 (40%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +A +G + QA + KA D + A Y LG +Y GD V
Sbjct: 153 AAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVP 212
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A F +A+ + HA + + G L G L K +A AN + N
Sbjct: 213 KDYQKAAEYFEKAANQDHAKSQLELGYLYDSGKLGKSDLQKAAFWYQKSADLGNANAQFN 272
Query: 236 LMN 238
L +
Sbjct: 273 LAD 275
>gi|440288763|ref|YP_007341528.1| Sel1 repeat protein [Enterobacteriaceae bacterium strain FGI 57]
gi|440048285|gb|AGB79343.1| Sel1 repeat protein [Enterobacteriaceae bacterium strain FGI 57]
Length = 484
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA +G PDAQ LG ++ D QQA + E+A Q + AL LGT+Y G+ V
Sbjct: 224 AAELGQPDAQNILGRLYATGEKGIKPDIQQALKWYERAAKQGNKDALINLGTLYYLGEQV 283
Query: 175 KKDIASALWCFHRASEKGHAGA 196
D A A F A E+G A A
Sbjct: 284 DIDYAKAFQLFDTAKEQGSAVA 305
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFY--YIEKAVDQLHPGALYLLGTVYLTGD-CVKKD 177
DPD + +G +L +++ AF + KA + P A +LG +Y TG+ +K D
Sbjct: 192 DPDITFLVG-QLYDAGFVKLANKNAFKMKWYRKAAELGQPDAQNILGRLYATGEKGIKPD 250
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
I AL + RA+++G+ A I G+L G QV
Sbjct: 251 IQQALKWYERAAKQGNKDALINLGTLYYLGEQV 283
>gi|421554229|ref|ZP_16000177.1| tetratricopeptide repeat family protein [Neisseria meningitidis
98008]
gi|402333499|gb|EJU68802.1| tetratricopeptide repeat family protein [Neisseria meningitidis
98008]
Length = 199
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GD AQ+ LG + E V+ D +A + +A DQ A +LLG +Y G V
Sbjct: 35 AAERGDTQAQFNLGM-MYAEGRGVRQDYAEAVRWTRQAADQGDAQAQFLLGFMYANGRGV 93
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++D A A F +++E+G A A G++ G V +
Sbjct: 94 RQDDAEAFRWFRQSAERGWAYAQAVLGAMYDEGRGVRQ 131
>gi|309786290|ref|ZP_07680917.1| uncharacterized protein ybeQ [Shigella dysenteriae 1617]
gi|308925841|gb|EFP71321.1| uncharacterized protein ybeQ [Shigella dysenteriae 1617]
Length = 288
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEQGDSEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|428173028|gb|EKX41933.1| hypothetical protein GUITHDRAFT_158179 [Guillardia theta CCMP2712]
Length = 282
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ L L + +A + EKA +Q H GAL+ LG Y GD V+
Sbjct: 121 AAEQGDSMAQFRLALCLATGKGVAKDFPEAIRWYEKAAEQEHGGALFNLGVCYAQGDGVE 180
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A+ + +A++ G A G LL G
Sbjct: 181 QDHTKAVSYYRKAADLGVVHAQHNLGLCLLTG 212
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 103 GACKAMGAALLVD----------AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKA 152
G C +G VD AA GD AQY +G +S ++A + KA
Sbjct: 62 GICYMVGKGTEVDEEQAVAYFRRAAEQGDATAQYNMGVCNGKGRGVKKSLEEAARWYRKA 121
Query: 153 VDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+Q A + L TG V KD A+ + +A+E+ H GA G +G V +
Sbjct: 122 AEQGDSMAQFRLALCLATGKGVAKDFPEAIRWYEKAAEQEHGGALFNLGVCYAQGDGVEQ 181
Query: 213 CLTK 216
TK
Sbjct: 182 DHTK 185
>gi|385227303|ref|YP_005787227.1| hypothetical protein HPSNT_05555 [Helicobacter pylori SNT49]
gi|344332216|gb|AEN17246.1| Cysteine-rich protein X [Helicobacter pylori SNT49]
Length = 256
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+A A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVK 156
>gi|237748063|ref|ZP_04578543.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379425|gb|EEO29516.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 1238
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 77 LALEADNSNTHARYWLSKLH---LKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR 133
+ + A+N + A++ L KL+ LK KA+G AA G AQY LG
Sbjct: 562 IEMSANNKVSMAQFQLGKLYEYGLKELPKDISKAIG--WYTRAAENGHATAQYRLGKLYL 619
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ +++ ++EK+ Q A++ LG +Y G VK+D+A AL F + + GH
Sbjct: 620 KADTPLKNIPLGLEFLEKSASQNITSAIFDLGNIYYDGKIVKQDMAKALNYFQKGTGLGH 679
Query: 194 AGAAIAYGSLLLRGVQV 210
+ G ++ G V
Sbjct: 680 LPSQNFVGFMIENGSGV 696
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 100 HVPG-ACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHP 158
H+P A G L +A MG+ AQ++LG L + + ++A ++EKA Q
Sbjct: 260 HIPELQNNAKGMLHLRRSAEMGNASAQFDLGRTLFQDKNSPAKRKEAVVWLEKAAQQDER 319
Query: 159 GALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
A LG +Y G+ V D AL RA++KG + A G + G
Sbjct: 320 RAQAFLGNMYYYGEFVPVDYVKALPLLMRAADKGDSFAQYTLGLAYIDG 368
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 39/176 (22%)
Query: 68 LKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
L A++ ++LA D+ A+YWL + + G +AA DPDAQ E
Sbjct: 447 LAEARKWYQLAASQDH--IKAKYWLGMSLFQGPDSEQDRKKGVYWFTEAAKQDDPDAQLE 504
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAV-DQLHPGALYL----------------------- 163
LG L + ++++QA + +KA +Q H G Y
Sbjct: 505 LGKSLLYGDGIDKNEKQACTWFKKAANNQQHTGQYYAGMCLMRGINGPVDIPKGMSLIEM 564
Query: 164 ------------LGTVYLTG-DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLR 206
LG +Y G + KDI+ A+ + RA+E GHA A G L L+
Sbjct: 565 SANNKVSMAQFQLGKLYEYGLKELPKDISKAIGWYTRAAENGHATAQYRLGKLYLK 620
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL+ AA+ GD AQY LG N + +++AF ++EK+ Q A Y LG +YL G
Sbjct: 345 LLMRAADKGDSFAQYTLGLAYIDGNGIAKDERKAFSWLEKSASQNRASAQYFLGLMYLDG 404
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ + ++ G+ A G+ G+ + + L +
Sbjct: 405 TGTPVNEEKGIRLLKELAKTGYVYAQYKLGTYAHSGLHMAKDLAE 449
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 88 ARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQA 145
A+Y+L H + G K M A + AA+ G + +E+G + D++A
Sbjct: 936 AQYFLGIYHKE--GKGVVKNMNEAFKWYLTAADNGHVSSMFEVGKMFANGRGTERDDKKA 993
Query: 146 FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL 205
F++ EKA + AL LG +Y G + D + A F +A+EK ++ A G + L
Sbjct: 994 FHWFEKAAENGSDSALTQLGIMYYKGLGISADKSKAASFFLKAAEKNNSYAQHWLGYMYL 1053
Query: 206 RG 207
G
Sbjct: 1054 YG 1055
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA AQY LG + V++ +AF + A D H +++ +G ++ G
Sbjct: 924 LFESAAGQNLASAQYFLGIYHKEGKGVVKNMNEAFKWYLTAADNGHVSSMFEVGKMFANG 983
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKK 227
++D A F +A+E G A G + +G+ + +K + + AA+K
Sbjct: 984 RGTERDDKKAFHWFEKAAENGSDSALTQLGIMYYKGLGISADKSKAASFFLKAAEK 1039
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 60/157 (38%), Gaps = 21/157 (13%)
Query: 116 AANMGDPDAQYELG----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA GD A Y LG L DY +AFY++ A Q P A Y L +Y G
Sbjct: 58 AATEGDTRAAYPLGLLYSAGLGTPIDY----DKAFYWLSIAARQNIPDAQYRLAGLYQEG 113
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV----PECLTKLNAKRVSAAKK 227
K + +A+ GH A A G +L G+ V PE + +
Sbjct: 114 KGTAKSEREFAYWVKKAAGNGHIDAQRAMGMILHYGLGVHKNLPESVKWFEKAANAGNAT 173
Query: 228 ARANLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
A+ L + MN AK + E G +WL R
Sbjct: 174 AQYYLGMDYMNGNGLAKNERE---------GEKWLYR 201
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 35/215 (16%)
Query: 75 FELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRV 134
FE A A+N + A L ++ K A K+ A+ + AA + AQ+ LG
Sbjct: 997 FEKA--AENGSDSALTQLGIMYYKGLGISADKSKAASFFLKAAEKNNSYAQHWLGYMYLY 1054
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
++ + A ++ KA DQ GA++ LG Y G V + A+ +A GH
Sbjct: 1055 GKGLEKNGELANQWLSKAADQNETGAIFELGKQYWYGMGVPVNPEKAIVLLQKAGNDGH- 1113
Query: 195 GAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQ-- 252
+ A+R+ A E + EKA + FE AA+
Sbjct: 1114 ----------------------VIAQRILGYIYADGGPEKGIPLDFEKAVQWFEKAARQD 1151
Query: 253 -AGCNLGLRWLQ-------RIEEEEKRLLTESSRI 279
A +GL L + EE+ RLLT+S+ +
Sbjct: 1152 DAAGKMGLALLTLTGKGTPKNEEKGIRLLTQSANM 1186
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+N + A+Y L KL+LK P +G L +A+ A ++LG + + V+
Sbjct: 603 AENGHATAQYRLGKLYLKADTPLKNIPLGLEFLEKSASQNITSAIFDLG-NIYYDGKIVK 661
Query: 141 SDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
D +A Y +K H + +G + G VKKD A + +G A
Sbjct: 662 QDMAKALNYFQKGTGLGHLPSQNFVGFMIENGSGVKKDKEKACKIYDETGRRGSAYGLYR 721
Query: 200 YG 201
YG
Sbjct: 722 YG 723
>gi|444375215|ref|ZP_21174512.1| cysteine-rich protein X [Helicobacter pylori A45]
gi|443620249|gb|ELT80698.1| cysteine-rich protein X [Helicobacter pylori A45]
Length = 256
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVIYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|29348810|ref|NP_812313.1| hypothetical protein BT_3401 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298387890|ref|ZP_06997439.1| hypothetical protein HMPREF9007_04693 [Bacteroides sp. 1_1_14]
gi|29340716|gb|AAO78507.1| Toll-Interleukin receptor [Bacteroides thetaiotaomicron VPI-5482]
gi|298259297|gb|EFI02172.1| hypothetical protein HMPREF9007_04693 [Bacteroides sp. 1_1_14]
Length = 381
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 32/130 (24%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y G + ++ D + Y E+AV +P AL LG++Y G V+KDIA + F
Sbjct: 271 YHFGKGVEIDYDVARE------YYEEAVKSDYPLALNNLGSIYYNGHGVRKDIAKSFPYF 324
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKE 245
RA+E+G A ++L G V A KA KAK+
Sbjct: 325 CRAAERGVESAQFTVATMLFYGQGV-------------AVDKA-------------KAKK 358
Query: 246 QFEVAAQAGC 255
F+ AA GC
Sbjct: 359 WFQKAAAQGC 368
>gi|308503593|ref|XP_003113980.1| CRE-SEL-1 protein [Caenorhabditis remanei]
gi|308261365|gb|EFP05318.1| CRE-SEL-1 protein [Caenorhabditis remanei]
Length = 685
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G DA LG + D Q+AF Y+ K+ D+ P A +LG +Y+ G
Sbjct: 317 LTAAAESGSSDALTYLGKMYLDGTPFTPKDYQKAFEYLMKSADKSSPSAQAVLGAMYMKG 376
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
VKK+I AL +++K +A + L +GV E
Sbjct: 377 KGVKKNIEKALKLLTLSADKKNADGQMYLAELNYKGVPTSE 417
>gi|303282571|ref|XP_003060577.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458048|gb|EEH55346.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 162
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
+A G AQ+ +G + + ++AF ++ KA Q A Y++G +Y G+
Sbjct: 42 YTKSAEKGYAPAQHNMGVIHHEKGQH----EEAFKWVMKAAAQGCIQAEYIIGQLYAHGE 97
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V+K+I A+ + +A+E+GHAGA GS+ Q E + AA + AN
Sbjct: 98 GVEKNIPEAVKWYTKAAEQGHAGAHNNVGSIHHEKGQHEEAVKWFK----KAANQGDANG 153
Query: 233 ESNL 236
E+NL
Sbjct: 154 EANL 157
>gi|402773925|ref|YP_006593462.1| peptidoglycan-binding domain 1 protein [Methylocystis sp. SC2]
gi|401775945|emb|CCJ08811.1| Putative peptidoglycan-binding domain 1 protein [Methylocystis sp.
SC2]
Length = 1214
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
GDP AQYE+G RL + + A ++ EKA + A Y LG +Y G V +D A
Sbjct: 995 GDPAAQYEMGARLVEGRGAARDAKAAAHWFEKAAEMGLALAQYRLGAMYERGVGVARDYA 1054
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRG 207
A + RA+E G+A A LL G
Sbjct: 1055 RARQWYERAAESGNARAMHNVAVLLAEG 1082
>gi|383124985|ref|ZP_09945644.1| hypothetical protein BSIG_1270 [Bacteroides sp. 1_1_6]
gi|382983500|gb|EES68945.2| hypothetical protein BSIG_1270 [Bacteroides sp. 1_1_6]
Length = 413
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 32/130 (24%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y G + ++ D + Y E+AV +P AL LG++Y G V+KDIA + F
Sbjct: 303 YHFGKGVEIDYDVARE------YYEEAVKSDYPLALNNLGSIYYNGHGVRKDIAKSFPYF 356
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKE 245
RA+E+G A ++L G V A KA KAK+
Sbjct: 357 CRAAERGVESAQFTVATMLFYGQGV-------------AVDKA-------------KAKK 390
Query: 246 QFEVAAQAGC 255
F+ AA GC
Sbjct: 391 WFQKAAAQGC 400
>gi|421720131|ref|ZP_16159414.1| sel1 repeat family protein [Helicobacter pylori R046Wa]
gi|407220170|gb|EKE89978.1| sel1 repeat family protein [Helicobacter pylori R046Wa]
Length = 256
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDMPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|404379906|ref|ZP_10984955.1| hypothetical protein HMPREF9021_00513 [Simonsiella muelleri ATCC
29453]
gi|404294528|gb|EFG32107.2| hypothetical protein HMPREF9021_00513 [Simonsiella muelleri ATCC
29453]
Length = 199
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+ + AN G DAQ LG + +QA + +KAV Q H A Y LG +Y G
Sbjct: 67 IFSELANQGYADAQNNLGFMYENGQGVAKDYRQALLWYQKAVSQEHIDAQYNLGFMYANG 126
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V +D AL + +A+ +G+A A G + G+ V +
Sbjct: 127 LGVAQDYRQALLWYQKAANQGYAVAQQNLGLMYADGLGVAQ 167
>gi|386751464|ref|YP_006224684.1| cysteine-rich protein X [Helicobacter pylori Shi417]
gi|384557722|gb|AFH98190.1| cysteine-rich protein X [Helicobacter pylori Shi417]
Length = 256
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|374624115|ref|ZP_09696590.1| hypothetical protein ECTPHS_13798 [Ectothiorhodospira sp. PHS-1]
gi|373943191|gb|EHQ53736.1| hypothetical protein ECTPHS_13798 [Ectothiorhodospira sp. PHS-1]
Length = 155
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
++ A+ GDP A++++ L A +++ A +Q +P A++ LG Y+TG+
Sbjct: 66 VIQQADAGDPAARHDVALMLMEAG----CQALAIHWLTAAANQQYPDAMHWLGRCYITGE 121
Query: 173 CVKKDIASALWCFHRASEKGH 193
V +D A L RA+E+GH
Sbjct: 122 GVPRDEALGLSWIRRAAERGH 142
>gi|302188614|ref|ZP_07265287.1| Sel1 domain-containing protein [Pseudomonas syringae pv. syringae
642]
Length = 372
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLR----VEN 136
A+N + A+Y L +H +A G + ++A G+ DA+Y +G + E
Sbjct: 60 AENGDPVAQYKLGLIHFYGRGVDIDRAKGLQWVTESAERGNADAEYFMGVAITAGVATET 119
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
D+ Q+ + + KA +Q H A L ++Y G V+KD A RAS +G A A
Sbjct: 120 DFGQAAR----WFSKAAEQGHVKAQQKLASLYFNGSGVEKDDQEAFKWASRASAQGDAEA 175
Query: 197 AIAYGSLLL--RGVQV-PECLTKL 217
+L +G QV P+ KL
Sbjct: 176 KPLLATLYFYGKGTQVDPQHAVKL 199
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA GDP AQY+LG + V D+ + ++ ++ ++ + A Y +G G
Sbjct: 59 AAENGDPVAQYKLGL-IHFYGRGVDIDRAKGLQWVTESAERGNADAEYFMGVAITAGVAT 117
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ D A F +A+E+GH A SL G V
Sbjct: 118 ETDFGQAARWFSKAAEQGHVKAQQKLASLYFNGSGV 153
>gi|163795919|ref|ZP_02189883.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
gi|159178952|gb|EDP63488.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
Length = 481
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ +G + Q +A + KA +Q + A Y LG +Y GD V
Sbjct: 121 AAEQGRADAQFIIGLMYNIGKGVTQDYAEAVKWYRKAAEQGYADAQYKLGWMYARGDGVT 180
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
+D A A+ + +A+E+G A A G G +T+ NA+ V +KA
Sbjct: 181 QDYAEAVKWYRKAAEQGDAVAQHNLGVSYDNG----NGVTQDNAEAVKWYRKA 229
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ LG N Q + +A + KA +Q + A Y LG Y GD V
Sbjct: 193 AAEQGDAVAQHNLGVSYDNGNGVTQDNAEAVKWYRKAAEQGYAAAQYNLGVSYYNGDGVL 252
Query: 176 KD-IASALW 183
+D IA+ +W
Sbjct: 253 QDTIAAYMW 261
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQY+LG + Q +A + KA +Q A + LG Y G+ V
Sbjct: 157 AAEQGYADAQYKLGWMYARGDGVTQDYAEAVKWYRKAAEQGDAVAQHNLGVSYDNGNGVT 216
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D A A+ + +A+E+G+A A G G V
Sbjct: 217 QDNAEAVKWYRKAAEQGYAAAQYNLGVSYYNGDGV 251
>gi|147906805|ref|NP_001090027.1| sel-1 suppressor of lin-12-like precursor [Xenopus laevis]
gi|63100236|gb|AAH95916.1| MGC99195 protein [Xenopus laevis]
Length = 822
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A Y KA D +P LG YL G V
Sbjct: 424 AANAGNSHAMAFLGKMYSEGSDSVTQSNETALQYFRKAADMGNPVGQSGLGMAYLYGRGV 483
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D AL F +A+E+G + GS+ G+ V
Sbjct: 484 PVDYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 519
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y+LG ++ E+ ++AF Y KA D H A+ ++ L GD +K++I SA
Sbjct: 207 YQLGMKMLNESSKRSQKKEAFQYFMKASDMDHIKAMEMVAYALLFGDPIKQNITSAKEFL 266
Query: 186 HRASEKGHAGAAIAYGSLLLRGV 208
+ SE+G +A G L G+
Sbjct: 267 EKLSEQGSPRGQMALGFLYASGL 289
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 75 FELALEADNS-NTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCR 131
FE +A N+ N+HA +L K++ + ++ AL AA+MG+P Q LG
Sbjct: 418 FEYFNQAANAGNSHAMAFLGKMYSE-GSDSVTQSNETALQYFRKAADMGNPVGQSGLGMA 476
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
+ A Y +KA +Q LG++Y G VKKD AL F+ AS+
Sbjct: 477 YLYGRGVPVDYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQALKYFNLASQG 536
Query: 192 GH 193
GH
Sbjct: 537 GH 538
>gi|148826085|ref|YP_001290838.1| Sel1 repeat-containing protein [Haemophilus influenzae PittEE]
gi|148716245|gb|ABQ98455.1| Sel1-like repeat protein [Haemophilus influenzae PittEE]
Length = 254
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G L +AA D DAQ+++G + Q++ +A +++KA +Q + +LG +Y
Sbjct: 119 GFKWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLKKAANQNDTESQMILGDMY 178
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD VK++ A+ + +A+E ++ A G + G++V +
Sbjct: 179 YDGDGVKENKTEAIKWYQKAAENNNSRAQAIVGLAYMGGIEVKQNF 224
>gi|452944297|ref|YP_007500462.1| Sel1 domain protein repeat-containing protein [Hydrogenobaculum sp.
HO]
gi|452882715|gb|AGG15419.1| Sel1 domain protein repeat-containing protein [Hydrogenobaculum sp.
HO]
Length = 216
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAAN G A+ +LG +++ +A Y+ +KA DQ + L +Y+ G
Sbjct: 49 LFKDAANQGYAPAEVKLGVLYLYGEGTLKNYDKAIYWFKKAADQGDADGGFDLSVIYVNG 108
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V ++ AL+ + +E+G+A G + L G VP+
Sbjct: 109 LGVPRNYRKALYWVKKFAERGNAYGEFGLGWMYLFGKGVPK 149
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 56 YCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--L 113
Y N ++ +PL K A A+ A L L+L + G K A+
Sbjct: 38 YKNKNYQKALPLFKDA---------ANQGYAPAEVKLGVLYL--YGEGTLKNYDKAIYWF 86
Query: 114 VDAANMGDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AA+ GD D ++L L V +Y ++A Y+++K ++ + + LG +YL
Sbjct: 87 KKAADQGDADGGFDLSVIYVNGLGVPRNY----RKALYWVKKFAERGNAYGEFGLGWMYL 142
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK-LNAKRVSAAK-- 226
G V KD AL+ +++E+G+A G + G V + K L + SA +
Sbjct: 143 FGKGVPKDYDEALYWVKKSAEQGNARGENLLGYMYENGFGVSQDYNKALYWYKKSAEQGY 202
Query: 227 -KARANLE 233
A+ANLE
Sbjct: 203 APAKANLE 210
>gi|417305670|ref|ZP_12092624.1| Sel1 domain protein repeat-containing protein [Rhodopirellula
baltica WH47]
gi|327538103|gb|EGF24793.1| Sel1 domain protein repeat-containing protein [Rhodopirellula
baltica WH47]
Length = 586
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 116 AANMGDPDAQYELG----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY LG L VE D+V++ + +KA DQ H A +G +Y G
Sbjct: 233 AAVAGLDSAQYNLGYMYDVGLGVEQDFVEASS----WYQKAADQNHVMAQRAIGMMYRDG 288
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
V +D + A+ F +++E+G+A A + S+ G VP+
Sbjct: 289 AGVTQDHSLAVEWFRKSAEQGYALAQESLASMYFHGRGVPQ 329
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A++G AQ+ LGC Q+D +A + ++A DQ A LG+++ G +++
Sbjct: 90 ADLGHAHAQFVLGCMHAEGLGVPQNDVEAVRWFQRAADQDFAVAQNWLGSMHQQGRGIRQ 149
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
D A FHRA+++G + A RG P+
Sbjct: 150 DDVQAFRWFHRAAQQGLSDAQFNLALCYRRGTGTPQ 185
>gi|403052541|ref|ZP_10907025.1| hypothetical protein AberL1_13571 [Acinetobacter bereziniae LMG
1003]
Length = 385
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 101 VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPG 159
VP KA G L +A GD AQ LG EN+YV Q+ + AF + E+A +
Sbjct: 188 VPQNIKA-GINFLTLSAEQGDVKAQAILGGLYGSENEYVEQNPELAFKWTERAAQRNDVD 246
Query: 160 ALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
AL LG +Y K+D+ + +ASE+G +AI G + +G V
Sbjct: 247 ALGNLGWMYYQAVGTKRDVQKGIQMLDQASERGSVQSAINLGLIYAKGEYV 297
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A+ G AQY+L L +N Q A Y+ +AV Q +P AL +G +Y GD V +
Sbjct: 28 ADKGQAKAQYQL--FLFYKN---QDPALALRYLNQAVQQDYPLALNAMGWLYYKGDGVTQ 82
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D A+ ++A +KG A + +L RG V
Sbjct: 83 DNQKAVAFLNKAKDKGEIFAYVNLATLYARGDAV 116
>gi|172061855|ref|YP_001809507.1| Sel1 domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171994372|gb|ACB65291.1| Sel1 domain protein repeat-containing protein [Burkholderia
ambifaria MC40-6]
Length = 285
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 38/80 (47%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
ALL +AA GDP A Y LG R QA ++ E A P A ++L Y
Sbjct: 160 ALLGEAAGQGDPAAAYYLGLIYRSGYGTAADPVQAAHWFELASRADIPSADFMLANAYRD 219
Query: 171 GDCVKKDIASALWCFHRASE 190
G V +D A AL + RA+E
Sbjct: 220 GSGVPRDEARALALYRRAAE 239
>gi|407977440|ref|ZP_11158312.1| hypothetical protein NA8A_23944 [Nitratireductor indicus C115]
gi|407427110|gb|EKF39822.1| hypothetical protein NA8A_23944 [Nitratireductor indicus C115]
Length = 261
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 92 LSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGC------RLRVENDYVQ-SD 142
+ L + Y G K M A+ AA+MGD + +G + D+ + D
Sbjct: 128 MVNLGITYSKRGPGKDMVRAMRWFRKAADMGDREGILHVGLLYHGFGNFGDDEDWNELDD 187
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
++A +I KA D A+Y LGT +L G VKK A A F RA++ GH A S
Sbjct: 188 KEALKWISKAADMGSAEAMYHLGTAHLFGHGVKKSDAEAASWFKRAADAGHESAKSWLES 247
Query: 203 LLLRGVQVPEC 213
L + EC
Sbjct: 248 LCAWNEGLTEC 258
>gi|126282500|ref|XP_001373506.1| PREDICTED: protein sel-1 homolog 1-like [Monodelphis domestica]
Length = 881
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 492 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 551
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ AL F +A+E+G + GS+ G+ V
Sbjct: 552 PVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 587
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
M + +A Y+ G ++ E+ ++A+ Y++KA D H A+ + +L GD +K+D+
Sbjct: 268 MQEAEAVYQAGMKILNESSKKTQKKEAYRYLQKAADMNHTKAMEKVSYAFLFGDYLKQDV 327
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+A F + +E+G A G L G+ V
Sbjct: 328 LAAKELFEKLTEEGSPKGQTALGFLYASGLSV 359
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 79 LEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L A+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 491 LAANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGLGMAYLYGR 549
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ A Y +KA +Q LG++Y G VK+D AL F+ AS+ GH
Sbjct: 550 GVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGH 606
>gi|154247008|ref|YP_001417966.1| Sel1 domain-containing protein [Xanthobacter autotrophicus Py2]
gi|154161093|gb|ABS68309.1| Sel1 domain protein repeat-containing protein [Xanthobacter
autotrophicus Py2]
Length = 384
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%)
Query: 144 QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL 203
+A + KA PGAL LG + L G +KKD A F A+EKG+ AA G L
Sbjct: 159 KAIEWYRKAAAAGSPGALLSLGNLTLAGQGLKKDELEAARLFREAAEKGNGPAAYNLGLL 218
Query: 204 LLRGVQVPECLTK 216
L+G Q+P+ T+
Sbjct: 219 YLQGRQIPKEPTE 231
>gi|50085803|ref|YP_047313.1| signal peptide [Acinetobacter sp. ADP1]
gi|49531779|emb|CAG69491.1| conserved hypothetical protein; putative signal peptide
[Acinetobacter sp. ADP1]
Length = 240
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 117 ANMGDPDAQYELGCR-LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G AQY LG L E + QA ++ A GA Y LG +Y+TG V
Sbjct: 44 AAQGKSTAQYHLGMMYLSGEQGVTKDTTQALKWLTLADQNGSVGAKYSLGLMYMTGTGVS 103
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
++ ++A F +A++ GHA A G + GV V + + +
Sbjct: 104 QNQSTAFEWFSKAAKFGHAQAQYTVGRMYSEGVGVEKNMPQ 144
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L L N + A+Y L +++ ++ AA G AQY +G R+ E
Sbjct: 77 LTLADQNGSVGAKYSLGLMYMTGTGVSQNQSTAFEWFSKAAKFGHAQAQYTVG-RMYSEG 135
Query: 137 DYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
V+ + QAF +I+KA Q +P A + LG +Y G V ++ A+ + +A+E +
Sbjct: 136 VGVEKNMPQAFEWIQKAALQGYPPAEFSLGLMYNDGRGVAQNKQQAIKWYTQAAEHQQSN 195
Query: 196 AAIAYGSLLLRG 207
A G + L G
Sbjct: 196 AQYNLGIMYLNG 207
>gi|398954452|ref|ZP_10675988.1| Sel1 repeat protein [Pseudomonas sp. GM33]
gi|426411657|ref|YP_007031756.1| Sel1 repeat-containing protein [Pseudomonas sp. UW4]
gi|398152471|gb|EJM40990.1| Sel1 repeat protein [Pseudomonas sp. GM33]
gi|426269874|gb|AFY21951.1| Sel1 repeat-containing protein [Pseudomonas sp. UW4]
Length = 184
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
N Q +QA +KA D+ A Y LG Y G +D+ AL F +AS +GHA
Sbjct: 41 NTQPQDLEQAIAACQKASDEGDAQAQYELGEFYYEGKNAPRDLNQALSYFEKASLQGHAQ 100
Query: 196 AAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEK-----AKEQFEVA 250
A G++ G VP N + K A N + ++ ++ +E+ EVA
Sbjct: 101 AQFKLGTMFFHGEGVPAN----NVQAYILLKMAAVNGAEDALDTADEVTEKMPREELEVA 156
Query: 251 AQAGCNLGLRWLQRIEEEEKR 271
Q + ++L ++ + R
Sbjct: 157 TQVLGQIFRKYLMELQSADGR 177
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A++ GD AQYELG E D QA Y EKA Q H A + LGT++ G+ V
Sbjct: 57 ASDEGDAQAQYELG-EFYYEGKNAPRDLNQALSYFEKASLQGHAQAQFKLGTMFFHGEGV 115
Query: 175 KKDIASALWCFHRASEKG 192
+ A A+ G
Sbjct: 116 PANNVQAYILLKMAAVNG 133
>gi|237748111|ref|ZP_04578591.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379473|gb|EEO29564.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 299
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A+ G+ DAQ LG +D ++ ++A + KA DQ P A +LG +Y+ G
Sbjct: 164 LEKASAQGEKDAQSFLGLMYLEGDDNNKNPKKAVELLTKAADQNEPLAQTVLGIMYIQGK 223
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
VK+D A + +E G+ AA G++ RG V
Sbjct: 224 FVKQDYKKAEELLTKGAEAGNTDAATFLGNMYYRGQGV 261
>gi|294648896|ref|ZP_06726351.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292825218|gb|EFF83966.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 217
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 111 ALLVDAANMGDPDAQYELGCRLR-----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
A ++ A GDP+AQ LG + +E D+++ A + ++ +P A Y LG
Sbjct: 51 AKYLEEAKQGDPNAQLSLGMIYKRGSYGIERDFIK----AVDWFRESAKSGNPYAQYNLG 106
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG-------VQVPECLTKLN 218
YL G V +++ + F +A+ +GHA + S+ L G ++ E +TK
Sbjct: 107 LAYLFGQGVDENLEKSYAWFMKAAIQGHANSQYEIASMYLAGEGVAKNEIKAVEWMTKAA 166
Query: 219 AKRVSAAKKARANL----ESNLMNPVEKAKEQFEVAAQAGCNLG 258
+ ++ A A + S +N ++ AK+ ++ AA+ G + G
Sbjct: 167 DQEMAIAAYALGEMYEDGSSGTVN-IKLAKKWYKKAAEYGLSWG 209
>gi|115353003|ref|YP_774842.1| Sel1 domain-containing protein [Burkholderia ambifaria AMMD]
gi|115282991|gb|ABI88508.1| Sel1 domain protein repeat-containing protein [Burkholderia
ambifaria AMMD]
Length = 285
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 38/80 (47%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
ALL +AA GDP A Y LG R QA ++ E A P A ++L Y
Sbjct: 160 ALLGEAAGQGDPAAAYYLGLIYRSGYGTAADPVQAAHWFELASRADIPAADFMLANAYRD 219
Query: 171 GDCVKKDIASALWCFHRASE 190
G V +D A AL + RA+E
Sbjct: 220 GSGVPRDEARALALYRRAAE 239
>gi|432488196|ref|ZP_19730083.1| hypothetical protein A171_00104 [Escherichia coli KTE213]
gi|432838213|ref|ZP_20071703.1| hypothetical protein A1YQ_01160 [Escherichia coli KTE140]
gi|433202137|ref|ZP_20385941.1| hypothetical protein WGY_00721 [Escherichia coli KTE95]
gi|431024032|gb|ELD37225.1| hypothetical protein A171_00104 [Escherichia coli KTE213]
gi|431391471|gb|ELG75111.1| hypothetical protein A1YQ_01160 [Escherichia coli KTE140]
gi|431725682|gb|ELJ89522.1| hypothetical protein WGY_00721 [Escherichia coli KTE95]
Length = 265
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD DAQY +G ++ + S D++AFY++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCDAQYIIGFYYNRDSA-IDSPDDEKAFYWLRLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G L RG
Sbjct: 67 SLGQKYTEDKSRHKDNGQAIFWLKKAALQGHTFASNALGWTLDRG 111
>gi|29122957|gb|AAO65770.1| SEL1L [Rattus norvegicus]
Length = 615
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 225 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 284
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 285 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 320
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 218 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 274
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 275 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 334
Query: 189 SEKGH 193
S+ GH
Sbjct: 335 SQGGH 339
>gi|224005148|ref|XP_002296225.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586257|gb|ACI64942.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 275
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
P A YELG V+ + +A + A ++ HP A Y+LG L G+ V+ D +A
Sbjct: 125 PQAMYELGVAFYTGEGVVEDEVEAVKWFMMAAEKNHPAACYMLGDCLLDGEGVEVDRGAA 184
Query: 182 LWCFHRASEKGHAGA 196
L A++ GH GA
Sbjct: 185 LDWLVTATDLGHRGA 199
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRL---RVENDYVQSDQQAFYYIEKAVDQL-HPGAL 161
+ G +L + A G PDA G L R D + A + + D HP A+
Sbjct: 71 QTTGFEMLRNLAEKGYPDAMAYYGMCLNEGRANTD--PNSTNAVVWFRRCADMYEHPQAM 128
Query: 162 YLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
Y LG + TG+ V +D A+ F A+EK H A G LL G V
Sbjct: 129 YELGVAFYTGEGVVEDEVEAVKWFMMAAEKNHPAACYMLGDCLLDGEGV 177
>gi|440794803|gb|ELR15953.1| tetratricopeptide repeat domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 511
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GDPDAQ LG D QA ++ +KAV + H A LG Y G V
Sbjct: 264 AAQQGDPDAQCNLGWMYASGQGTEADDAQAVFWYQKAVVKGHAVAECNLGNCYHDGRGVA 323
Query: 176 KDIASALWCFHRASEKGHA 194
KD+A A + +++KG+A
Sbjct: 324 KDLAVAFKWYESSAQKGNA 342
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + AA G+ AQ LG + QAF + KA +Q + + Y +G Y G
Sbjct: 404 LYLQAAAQGNFFAQNNLGIVFKNGMAVPMDLAQAFEWFMKAAEQDYANSQYWVGYFYDHG 463
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
V+KD A + +A+E+ +AG+ A + G V + L K
Sbjct: 464 WVVEKDHVKAAEWYEKAAEQKNAGSQYALAGMYETGRGVEKNLQK 508
>gi|291288401|ref|YP_003505217.1| Sel1 domain-containing protein repeat-containing protein
[Denitrovibrio acetiphilus DSM 12809]
gi|290885561|gb|ADD69261.1| Sel1 domain protein repeat-containing protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 216
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
+AA+ G PDA Y+ G V++ +QAF Y E + HP LG +Y G
Sbjct: 103 EAADQGMPDAIYKTGLFYLFGYLGVKNLEQAFNYFEMGANLGHPPCQNRLGLLYAGGRGT 162
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
K A++ + +A+E+GH A G +L G
Sbjct: 163 LKSDDDAVYWYRKAAEQGHGEAMYNLGCMLSTG 195
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 96 HLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAV 153
H+ H G + + AL + AA +G +A++ LG + +S ++AF + ++A
Sbjct: 46 HMYEHGEGVPQNIKMALRMYIRAAKLGSAEAKFLLGSFCSSGIYFEKSTKKAFVFYKEAA 105
Query: 154 DQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
DQ P A+Y G YL G K++ A F + GH
Sbjct: 106 DQGMPDAIYKTGLFYLFGYLGVKNLEQAFNYFEMGANLGH 145
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AN+G P Q LG ++SD A Y+ KA +Q H A+Y LG + TG K
Sbjct: 140 GANLGHPPCQNRLGLLYAGGRGTLKSDDDAVYWYRKAAEQGHGEAMYNLGCMLSTGRGGK 199
Query: 176 KDIASALWCFHRASE 190
D AL F+ A++
Sbjct: 200 ADNKEALKWFNLAAK 214
>gi|329118664|ref|ZP_08247367.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465222|gb|EGF11504.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 328
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD N A+Y L ++ AA AAN GD AQ+ LG Q
Sbjct: 192 ADQGNADAQYNLGLMYYNGQGVAQNYRQAAAWYQKAANQGDAAAQFNLGLMYDNGQGVAQ 251
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
+D+QA + +KA +Q H A Y LG +Y G + ++ A
Sbjct: 252 NDRQAAAWYQKAANQGHAKAQYNLGVMYYNGQGMARNYRQA 292
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AA AA+ G+ DAQY LG Q+ +QA + +KA +Q A + LG +Y
Sbjct: 185 AAWYQKAADQGNADAQYNLGLMYYNGQGVAQNYRQAAAWYQKAANQGDAAAQFNLGLMYD 244
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
G V ++ A + +A+ +GHA A G + G
Sbjct: 245 NGQGVAQNDRQAAAWYQKAANQGHAKAQYNLGVMYYNG 282
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 118 NMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKD 177
+ GD +AQY LG ++ +QA + +KA DQ + A Y LG +Y G V ++
Sbjct: 157 DQGDAEAQYNLGLMYDNGRGVAKNYRQAAAWYQKAADQGNADAQYNLGLMYYNGQGVAQN 216
Query: 178 IASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
A + +A+ +G A A G + G V + + A AA + A + NL
Sbjct: 217 YRQAAAWYQKAANQGDAAAQFNLGLMYDNGQGVAQNDRQAAAWYQKAANQGHAKAQYNL 275
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A N A++ L ++ K AA AAN GD DAQ LG +
Sbjct: 84 AQKGNAEAQFALGLMYDKGQGVAKNDRQAAAWYQKAANQGDADAQLNLGLMYANGRGVAK 143
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+ +QA + +KA DQ A Y LG +Y G V K+ A + +A+++G+A A
Sbjct: 144 NYRQAAAWWQKAADQGDAEAQYNLGLMYDNGRGVAKNYRQAAAWYQKAADQGNADAQYNL 203
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G + G V + + A AA + A + NL
Sbjct: 204 GLMYYNGQGVAQNYRQAAAWYQKAANQGDAAAQFNL 239
>gi|168334953|ref|ZP_02693071.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 561
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA+ G DAQ+ L + E+ + +KA D H A Y +G Y GD
Sbjct: 67 LEKAASQGHADAQWSLVSCYQYEDTRSLDLDKILECSQKAADMGHSAAQYQMGIRYYLGD 126
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
+ D A+A+ FH+++ G+A A + G G V + LTK AAKK A+
Sbjct: 127 GLSSDPATAMEYFHKSANLGYALAQLRLGYCYQYGDAVAQDLTKAAEWFKLAAKKGNADA 186
Query: 233 ESNL 236
+ +L
Sbjct: 187 QYSL 190
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+MG AQY++G R + + A Y K+ + + A LG Y GD V
Sbjct: 106 AADMGHSAAQYQMGIRYYLGDGLSSDPATAMEYFHKSANLGYALAQLRLGYCYQYGDAVA 165
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLE 233
+D+ A F A++KG+A A + G G V E N AA + N +
Sbjct: 166 QDLTKAAEWFKLAAKKGNADAQYSLGFCYRYGEGVSEDFALSNVWYQKAATQGHTNAQ 223
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 60/210 (28%)
Query: 78 ALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVD----------AANMGDPDAQYE 127
A+E + + + Y L++L L Y C G A+ D AA G+ DAQY
Sbjct: 135 AMEYFHKSANLGYALAQLRLGY-----CYQYGDAVAQDLTKAAEWFKLAAKKGNADAQYS 189
Query: 128 LGCRLR----VENDYVQSDQQAFYYIEKAVDQLH-------------------------- 157
LG R V D+ S+ + +KA Q H
Sbjct: 190 LGFCYRYGEGVSEDFALSN----VWYQKAATQGHTNAQFILDISSTSKTSQSSVISQAML 245
Query: 158 -----------PGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLR 206
P A Y+LG Y G+ V K++ A FH A+ + H A G
Sbjct: 246 DESLSAAELGDPNAQYILGLCYFKGELVPKNLXQAATYFHEAARQDHGKAQYELGKCYFY 305
Query: 207 GVQVPECLTKLNAKRVSAAKKARANLESNL 236
G + T+ +AA + A+ + L
Sbjct: 306 GYGKIQDFTQAATLYQAAANQGLASAQYRL 335
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 2/133 (1%)
Query: 53 VIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL 112
++ C + L A F A D+ A+Y L K + + A L
Sbjct: 262 ILGLCYFKGELVPKNLXQAATYFHEAARQDHGK--AQYELGKCYFYGYGKIQDFTQAATL 319
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AAN G AQY LG + A +A H GAL+ LG Y G+
Sbjct: 320 YQAAANQGLASAQYRLGSCYKFGKGVEPDANTAVQLFREAAKSQHTGALFELGNYYYYGN 379
Query: 173 CVKKDIASALWCF 185
DI ++ CF
Sbjct: 380 AETHDILLSMICF 392
>gi|420487748|ref|ZP_14986351.1| cysteine-rich protein X [Helicobacter pylori Hp P-8]
gi|420521626|ref|ZP_15020055.1| tetratricopeptide repeat family protein [Helicobacter pylori Hp
P-8b]
gi|393101138|gb|EJC01710.1| cysteine-rich protein X [Helicobacter pylori Hp P-8]
gi|393126196|gb|EJC26647.1| tetratricopeptide repeat family protein [Helicobacter pylori Hp
P-8b]
Length = 256
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVP-------ECLTK 216
A I G + + G+ VP EC K
Sbjct: 134 TNAYINLGIMYMEGMGVPSNYAKATECFRK 163
>gi|147667688|gb|ABQ45810.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSTYVK 156
>gi|410024344|ref|YP_006893597.1| hypothetical protein C695_05765 [Helicobacter pylori Rif1]
gi|410502110|ref|YP_006936637.1| hypothetical protein C730_05760 [Helicobacter pylori Rif2]
gi|410682630|ref|YP_006935032.1| hypothetical protein C694_05760 [Helicobacter pylori 26695]
gi|409894271|gb|AFV42329.1| hypothetical protein C694_05760 [Helicobacter pylori 26695]
gi|409896001|gb|AFV43923.1| hypothetical protein C695_05765 [Helicobacter pylori Rif1]
gi|409897661|gb|AFV45515.1| hypothetical protein C730_05760 [Helicobacter pylori Rif2]
Length = 256
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G+P A LG + +++A Y +KAVD P LG +Y G V KD
Sbjct: 60 GEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEK 119
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
A+ F A+EKG+ A I G + + G VP K
Sbjct: 120 KAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|391230754|ref|ZP_10266960.1| TPR repeat-containing protein [Opitutaceae bacterium TAV1]
gi|391220415|gb|EIP98835.1| TPR repeat-containing protein [Opitutaceae bacterium TAV1]
Length = 376
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQ LG L Q +A ++ KA +Q H + Y LG G V+
Sbjct: 107 AAEQGNVDAQCMLGVLLMTGRGIRQDPAEAVSWLRKAAEQGHANSQYFLGLALDEGVGVE 166
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A+ + +A+E+ H A G L +G+ V + + AA + A+ +++
Sbjct: 167 KDETGAVEWWRKAAEQDHPDAQERLGYALQKGIGVTKDEAEGLKWYYKAAARGHASAQNS 226
Query: 236 LMNPVEKAKEQFEVAAQA 253
L +E + + AA+A
Sbjct: 227 LGYALENGRGTEKNAAEA 244
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G ++QY LG L E V+ D+ A + KA +Q HP A LG G
Sbjct: 140 LRKAAEQGHANSQYFLGLALD-EGVGVEKDETGAVEWWRKAAEQDHPDAQERLGYALQKG 198
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
V KD A L +++A+ +GHA A + G L G + + AA + + N
Sbjct: 199 IGVTKDEAEGLKWYYKAAARGHASAQNSLGYALENGRGTEKNAAEAVKWYRVAADQGQVN 258
Query: 232 LESNL 236
++NL
Sbjct: 259 AQNNL 263
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G +AQ L L + +A + K+ + HP A Y LG +TG+ V+
Sbjct: 251 AADQGQVNAQNNLALALTNGRGIAEDKIKAVEWWRKSSELGHPKAQYNLGLALITGNGVE 310
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
K++ A + +A+E+GHA A G L G
Sbjct: 311 KNMTEAAIWWRKAAEQGHAEAQNNLGFALWTG 342
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
++ +G P AQY LG L N ++ +A + KA +Q H A LG TGD +
Sbjct: 287 SSELGHPKAQYNLGLALITGNGVEKNMTEAAIWWRKAAEQGHAEAQNNLGFALWTGDGIA 346
Query: 176 KDIASALWCFHRASEKGH 193
K+ A +A+E+G+
Sbjct: 347 KNQEEATRWLRKAAEQGN 364
>gi|422318977|ref|ZP_16400065.1| hypothetical protein HMPREF0005_05674, partial [Achromobacter
xylosoxidans C54]
gi|317406380|gb|EFV86604.1| hypothetical protein HMPREF0005_05674 [Achromobacter xylosoxidans
C54]
Length = 473
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ LG + D+ A + +A DQ + A LG YL+G V
Sbjct: 219 AAEQGQPKAQNNLGAMYFTGSGVPADDKLAVQWWRRAADQGNAAAQDRLGGAYLSGRGVP 278
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A +A+E+ HA A G+L +G+ VP+
Sbjct: 279 QDDLQASQWLRKAAEQDHAPAQDTLGTLYEQGLGVPK 315
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 52/132 (39%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
AD ARY L P A AA G +AQ LG +
Sbjct: 148 ADQGYAEARYQLGDHFFDAPAPRRDDAQARRWFALAAAQGHAEAQNNLGVMYADGLGGPR 207
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
+A + KA +Q P A LG +Y TG V D A+ + RA+++G+A A
Sbjct: 208 DVGKAVEWFRKAAEQGQPKAQNNLGAMYFTGSGVPADDKLAVQWWRRAADQGNAAAQDRL 267
Query: 201 GSLLLRGVQVPE 212
G L G VP+
Sbjct: 268 GGAYLSGRGVPQ 279
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY L + + A + KA DQ +P A + L +Y GD V
Sbjct: 327 AAEQGLDTAQYNLARQYDFGRGVPRDLASARAWYGKAADQGYPRAQFNLAVMYANGDGVP 386
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
+D A A+ +A+ +GH A G + G VP L
Sbjct: 387 QDDAQAVRLMRKAATQGHRQATFGLGVMYAEGRGVPRNL 425
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 52/121 (42%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ AQ LG Q D QA ++ KA +Q H A LGT+Y G V
Sbjct: 255 AADQGNAAAQDRLGGAYLSGRGVPQDDLQASQWLRKAAEQDHAPAQDTLGTLYEQGLGVP 314
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD + A+ + RA+E+G A G VP L A AA + + N
Sbjct: 315 KDESQAVQWYRRAAEQGLDTAQYNLARQYDFGRGVPRDLASARAWYGKAADQGYPRAQFN 374
Query: 236 L 236
L
Sbjct: 375 L 375
>gi|188527898|ref|YP_001910585.1| cysteine-rich protein X [Helicobacter pylori Shi470]
gi|188144138|gb|ACD48555.1| cysteine-rich protein X [Helicobacter pylori Shi470]
Length = 256
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVTKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 122 PDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASA 181
P LG + + +++A Y A ++ + A LG +Y+ G V + A A
Sbjct: 98 PRGYNNLGVMYKEGRGVTKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKA 157
Query: 182 LWCFHRASEKGHAGAAIAYGSLLLRG 207
CF +A KG+ A I G + G
Sbjct: 158 TECFRKAMHKGNVEAYILLGDIYYSG 183
>gi|417826717|ref|ZP_12473293.1| sel1 repeat family protein [Shigella flexneri J1713]
gi|420319033|ref|ZP_14820889.1| sel1 repeat family protein [Shigella flexneri 2850-71]
gi|335576917|gb|EGM63155.1| sel1 repeat family protein [Shigella flexneri J1713]
gi|391254326|gb|EIQ13488.1| sel1 repeat family protein [Shigella flexneri 2850-71]
Length = 325
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG--VQVPECLTKLNAK 220
LG Y KD A++ +A+ +GH A+ A G +L RG E +T
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIA 126
Query: 221 RVSAAKKARANL 232
S A+ NL
Sbjct: 127 AESGMSYAQNNL 138
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFTKAAE 272
>gi|282891587|ref|ZP_06300078.1| conserved hypothetical protein [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174833|ref|YP_004651643.1| hypothetical protein PUV_08390 [Parachlamydia acanthamoebae UV-7]
gi|281498555|gb|EFB40883.1| conserved hypothetical protein [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479191|emb|CCB85789.1| uncharacterized protein ybeQ [Parachlamydia acanthamoebae UV-7]
Length = 537
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDY-VQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA+ +P+ QY L L EN +Q + Q A Y + A Q A LG YLTG
Sbjct: 374 AADHENPEGQYNLA--LMYENGRGIQPNLQTAAQYYQLAASQGSSLAQNNLGVFYLTGKG 431
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
V+KD+ A F +A+E GH AA G L G VP+ K
Sbjct: 432 VEKDLKRAFDLFTQAAESGHPVAASNLGRLYETGSGVPQDYLK 474
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 60 NDRRLIPLLKTAKENFELALEADNS---NTHARYWLSKLHLKYHVPGACKAMGAALLVDA 116
N R + P L+TA + ++LA +S N ++L+ ++ + A L A
Sbjct: 392 NGRGIQPNLQTAAQYYQLAASQGSSLAQNNLGVFYLTGKGVEKDLKRAFD-----LFTQA 446
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G P A LG + Q +A Y+ +K+ +Q P LY LG +Y+ G +K
Sbjct: 447 AESGHPVAASNLGRLYETGSGVPQDYLKALYWYQKSAEQNDPLGLYYLGRLYINGLGTQK 506
Query: 177 DIASALWCFHRASEKGHAGA 196
L F RA+ G+ A
Sbjct: 507 KGQEGLDLFKRAARLGNPQA 526
>gi|420430843|ref|ZP_14929869.1| cysteine-rich protein X [Helicobacter pylori Hp A-20]
gi|147667634|gb|ABQ45783.1| hypothetical protein hp1117 [Helicobacter pylori]
gi|393045446|gb|EJB46429.1| cysteine-rich protein X [Helicobacter pylori Hp A-20]
Length = 256
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVP-------ECLTK 216
A A I G + + G VP EC K
Sbjct: 134 ANAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|387773724|ref|ZP_10129012.1| Sel1 repeat protein [Haemophilus parahaemolyticus HK385]
gi|386903933|gb|EIJ68733.1| Sel1 repeat protein [Haemophilus parahaemolyticus HK385]
Length = 129
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD DAQ+ LG Q +A + +A +Q + A + LG +Y G VK+
Sbjct: 2 AEQGDADAQFNLGNMYDNGQGIKQDYFEAVKWYRQAAEQGNAKAQFNLGNMYDNGKGVKQ 61
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
D A+ + + +E+G+A A + G L + +GVQ + L K
Sbjct: 62 DYFEAVKWYRKVAEQGNANAQVLLGFLYILGKGVQRNKALAK 103
>gi|418254052|ref|ZP_12878954.1| sel1 repeat family protein [Shigella flexneri 6603-63]
gi|397900805|gb|EJL17161.1| sel1 repeat family protein [Shigella flexneri 6603-63]
Length = 325
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG--VQVPECLTKLNAK 220
LG Y KD A++ +A+ +GH A+ A G +L RG E +T
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIA 126
Query: 221 RVSAAKKARANL 232
S A+ NL
Sbjct: 127 AESGMSYAQNNL 138
>gi|384919919|ref|ZP_10019947.1| Sel1 domain-containing protein [Citreicella sp. 357]
gi|384466211|gb|EIE50728.1| Sel1 domain-containing protein [Citreicella sp. 357]
Length = 540
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 68 LKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGAC---KAMGAALLVDAANMGDPDA 124
+ A+ + L+ A+ N A L++++L ++PG A A LL AA G+ +A
Sbjct: 87 VDVAQADHWLSRAAEGGNVDAATLLARVYLS-NIPGGPTREPARAAGLLSQAAARGNAEA 145
Query: 125 QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWC 184
QY LG Q A+ + A +Q HPGA + G D +AL
Sbjct: 146 QYLLGLLTDGGTGVPQDAAMAYNWFLAAAEQQHPGAQLEVSRALSRGKGTALDTGAALDW 205
Query: 185 FHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
RA+E G A A + G VP T+
Sbjct: 206 LTRAAENGEAEAQFYLSNAYESGGSVPANPTE 237
>gi|386753044|ref|YP_006226263.1| cysteine-rich protein X [Helicobacter pylori Shi169]
gi|384559302|gb|AFH99769.1| cysteine-rich protein X [Helicobacter pylori Shi169]
Length = 256
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|422782569|ref|ZP_16835354.1| Sel1 [Escherichia coli TW10509]
gi|323976373|gb|EGB71463.1| Sel1 [Escherichia coli TW10509]
Length = 325
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 67 SLGQKYTEDKSRHKDNGQAIFWLKKAALQGHTFASNALGWILDRG 111
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
KA+ A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KALAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+Y G V+KD +A F +A+E +A A
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFTKAAECDNATA 278
>gi|154415153|ref|XP_001580602.1| TKL family protein kinase [Trichomonas vaginalis G3]
gi|121914821|gb|EAY19616.1| TKL family protein kinase [Trichomonas vaginalis G3]
Length = 779
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G ++QY GC L N + Q+A +++ A D + A +L + G+ VK
Sbjct: 496 AAEGGHTESQYLCGCILLSGNGVKKDCQKAAVFLKYAADAGNVDACFLCSKLLSEGNGVK 555
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
KD A++ F +A+E GH A G L G E L K K RA LE
Sbjct: 556 KDAKKAMYYFRKAAEGGHDEALFRAGILFSDG---EEFLMKSEVK-----GDTRAMLELG 607
Query: 236 LM----NPVEKAKEQFEVAAQAG-----CNLGL-----RWLQRIEEEEKRL 272
+ N EKA E ++ + C+LG+ R Q+ E+E L
Sbjct: 608 SLCEQRNEYEKAIEHYKKGVEKNDSDCICSLGVLYENGRGTQQDEQEAMNL 658
>gi|114330400|ref|YP_746622.1| Sel1 domain-containing protein [Nitrosomonas eutropha C91]
gi|114307414|gb|ABI58657.1| Sel1 domain protein repeat-containing protein [Nitrosomonas
eutropha C91]
Length = 232
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 21/145 (14%)
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI----------ASALWCFHRASE 190
+ +Q F + K + A LG++Y +G+ V D A+A W F+RA+E
Sbjct: 74 TPEQRFLNLRKKAEAGDAEAQNGLGSMYFSGEAVSHDAQGNPLSKDPEAAAGW-FYRAAE 132
Query: 191 KGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL----------MNPV 240
+GHA A G L G VP+ TK AA++ + ++NL
Sbjct: 133 QGHADAQFNLGLLYFTGEGVPQDKTKAVELFTKAAEQGNIDAQNNLGVIYLLGEGVEQNT 192
Query: 241 EKAKEQFEVAAQAGCNLGLRWLQRI 265
KA E FE AA+ G ++ L+ +
Sbjct: 193 NKAVEWFEKAAEQGNEEAIKNLEAV 217
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG Q +A KA +Q + A LG +YL G+ V+
Sbjct: 130 AAEQGHADAQFNLGLLYFTGEGVPQDKTKAVELFTKAAEQGNIDAQNNLGVIYLLGEGVE 189
Query: 176 KDIASALWCFHRASEKGH 193
++ A+ F +A+E+G+
Sbjct: 190 QNTNKAVEWFEKAAEQGN 207
>gi|407043395|gb|EKE41930.1| protein kinase domain containing protein [Entamoeba nuttalli P19]
Length = 1079
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHL-KYHVPGACKAMGAAL--LVDAANMGDPDAQYE 127
AK+ +E+A + NSN+ A+ ++L L +Y + + AL L A+ G+ DA Y
Sbjct: 831 AKKCYEIA--SLNSNSEAQSKYAQLLLDEYRNTKNEETLNEALDMLDKASKNGNADAMYN 888
Query: 128 LG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
G C + + ++ +AF + A + HP +LY+LG +Y G V +D A+
Sbjct: 889 YGLCFYKGFGNLKKNQIKAFDLFKAAAFKKHPDSLYILGVMYYKGKYVFEDKTLAMEYIT 948
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
+A+E + A G RG+ P + K V A+K
Sbjct: 949 KAAELHNHRALFHIGMCFFRGIGKPLDVDKAMEFFVEASK 988
>gi|386746536|ref|YP_006219753.1| hypothetical protein HPB14_05255 [Helicobacter pylori HUP-B14]
gi|384552785|gb|AFI07733.1| hypothetical protein HPB14_05255 [Helicobacter pylori HUP-B14]
Length = 256
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDMPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|406605617|emb|CCH42933.1| Activator of C kinase protein 1 [Wickerhamomyces ciferrii]
Length = 708
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 121 DPDAQYELGC------RLRVENDYV--QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
DP+AQY C ++V + ++ ++F Y K+ +Q H A+Y LG Y G
Sbjct: 404 DPEAQYITACLYSNSPSIKVPYPTILDKNFDKSFEYYLKSANQGHEKAMYRLGVTYEIGL 463
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+++ + AL CF R++E G + G + RG
Sbjct: 464 GTQQNDSKALECFIRSAEFGSVSSMFKLGMIYSRG 498
>gi|420160287|ref|ZP_14667071.1| Sel1 repeat protein, partial [Capnocytophaga ochracea str. Holt 25]
gi|394760742|gb|EJF43245.1| Sel1 repeat protein, partial [Capnocytophaga ochracea str. Holt 25]
Length = 251
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + +A+Y L++ + G L A+ G+P+AQ EL R Q
Sbjct: 66 AETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVEQ 125
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
S ++ + IEK ++ +P L Y +G+ V KD+ A + +AS+ G++ A +
Sbjct: 126 SKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEMLL 185
Query: 201 GSLLLR-GVQVPECLTKL 217
S PE + +L
Sbjct: 186 ASWAYEINASNPEAIERL 203
>gi|420370662|ref|ZP_14871190.1| sel1 repeat family protein [Shigella flexneri 1235-66]
gi|391320029|gb|EIQ76949.1| sel1 repeat family protein [Shigella flexneri 1235-66]
Length = 325
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG--VQVPECLTKLNAK 220
LG Y KD A++ +A+ +GH A+ A G +L RG E +T
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIA 126
Query: 221 RVSAAKKARANL 232
S A+ NL
Sbjct: 127 AESGMSYAQNNL 138
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
VY G V+KD +A F +A+E
Sbjct: 248 YVYKHGQGVEKDYQAAFEWFTKAAE 272
>gi|110804707|ref|YP_688227.1| hypothetical protein SFV_0682 [Shigella flexneri 5 str. 8401]
gi|415855661|ref|ZP_11530950.1| uncharacterized protein ybeQ [Shigella flexneri 2a str. 2457T]
gi|417700737|ref|ZP_12349877.1| hypothetical protein SFK218_0952 [Shigella flexneri K-218]
gi|417721725|ref|ZP_12370570.1| hypothetical protein SFK304_0857 [Shigella flexneri K-304]
gi|417727080|ref|ZP_12375823.1| hypothetical protein SFK671_0751 [Shigella flexneri K-671]
gi|417732186|ref|ZP_12380856.1| hypothetical protein SF274771_0788 [Shigella flexneri 2747-71]
gi|417737515|ref|ZP_12386121.1| hypothetical protein SF434370_0852 [Shigella flexneri 4343-70]
gi|417742174|ref|ZP_12390725.1| sel1 repeat family protein [Shigella flexneri 2930-71]
gi|420340322|ref|ZP_14841847.1| sel1 repeat family protein [Shigella flexneri K-404]
gi|424837174|ref|ZP_18261811.1| hypothetical protein SF5M90T_681 [Shigella flexneri 5a str. M90T]
gi|110614255|gb|ABF02922.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|313649711|gb|EFS14135.1| uncharacterized protein ybeQ [Shigella flexneri 2a str. 2457T]
gi|332760985|gb|EGJ91273.1| hypothetical protein SF434370_0852 [Shigella flexneri 4343-70]
gi|332761237|gb|EGJ91523.1| hypothetical protein SF274771_0788 [Shigella flexneri 2747-71]
gi|332763356|gb|EGJ93596.1| hypothetical protein SFK671_0751 [Shigella flexneri K-671]
gi|332768254|gb|EGJ98439.1| sel1 repeat family protein [Shigella flexneri 2930-71]
gi|333008114|gb|EGK27590.1| hypothetical protein SFK218_0952 [Shigella flexneri K-218]
gi|333021600|gb|EGK40850.1| hypothetical protein SFK304_0857 [Shigella flexneri K-304]
gi|383466226|gb|EID61247.1| hypothetical protein SF5M90T_681 [Shigella flexneri 5a str. M90T]
gi|391273511|gb|EIQ32336.1| sel1 repeat family protein [Shigella flexneri K-404]
Length = 325
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG--VQVPECLTKLNAK 220
LG Y KD A++ +A+ +GH A+ A G +L RG E +T
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIA 126
Query: 221 RVSAAKKARANL 232
S A+ NL
Sbjct: 127 AESGMSYAQNNL 138
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFTKAAE 272
>gi|237749289|ref|ZP_04579769.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229380651|gb|EEO30742.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 291
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA + + +AQ L R + + + Y+ +KA + +P +LG +Y+ G+ V+
Sbjct: 98 AAELENAEAQANLAALYRNSLVVPRDNAKVIYWAQKAAEHGNPRGQNILGFMYMIGEGVQ 157
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A A + +A+E+G AG + L G VP+
Sbjct: 158 QDDAKAASWYQKAAEQGFAGGQRNLAFMYLNGKGVPQ 194
>gi|117924830|ref|YP_865447.1| Sel1 domain-containing protein [Magnetococcus marinus MC-1]
gi|117608586|gb|ABK44041.1| Sel1 domain protein repeat-containing protein [Magnetococcus
marinus MC-1]
Length = 746
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L+ A GD +AQY +G LR E F +++KA DQ H A LG +Y G
Sbjct: 524 LMRLARRGDAEAQYRMGQSLRDETALGNGLDDGFKWLKKAADQGHVQAQNSLGYMYSQGI 583
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ D AL + A++ G A A G + RG V
Sbjct: 584 GTRVDFLKALKWYGEAAKHGDALAQFNVGHMHYRGKGV 621
>gi|440801538|gb|ELR22556.1| Sel1 repeat-containing protein [Acanthamoeba castellanii str. Neff]
Length = 630
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q+++ AF Y+++A Q HP A LLG +YL G V++++ A+ F +++E+G++ +
Sbjct: 285 QNNKTAFQYLQQAASQNHPYAQALLGYMYLHGMGVERNVKEAVNYFWKSAEQGNSDGILH 344
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGL 259
+ G V + K ++A + NL +F V A C++G+
Sbjct: 345 LANCYFYGEGVTQDYGKALQYYLAATEGGNLVAHFNLAQ-----MHRFGVGANRNCHVGV 399
Query: 260 RWLQRIEE 267
+++ E
Sbjct: 400 SLYKKLVE 407
>gi|24112056|ref|NP_706566.1| hypothetical protein SF0637 [Shigella flexneri 2a str. 301]
gi|30062167|ref|NP_836338.1| hypothetical protein S0659 [Shigella flexneri 2a str. 2457T]
gi|384542235|ref|YP_005726297.1| hypothetical protein SFxv_0704 [Shigella flexneri 2002017]
gi|24050882|gb|AAN42273.1| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30040412|gb|AAP16144.1| hypothetical protein S0659 [Shigella flexneri 2a str. 2457T]
gi|281600020|gb|ADA73004.1| hypothetical protein SFxv_0704 [Shigella flexneri 2002017]
Length = 327
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 68
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG--VQVPECLTKLNAK 220
LG Y KD A++ +A+ +GH A+ A G +L RG E +T
Sbjct: 69 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIA 128
Query: 221 RVSAAKKARANL 232
S A+ NL
Sbjct: 129 AESGMSYAQNNL 140
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 190 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 249
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 250 YMYKHGQGVEKDYQAAFEWFTKAAE 274
>gi|256819275|ref|YP_003140554.1| Sel1 domain-containing protein repeat-containing protein, partial
[Capnocytophaga ochracea DSM 7271]
gi|256580858|gb|ACU91993.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea DSM 7271]
Length = 230
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
G + +++ A GD +AQ+E+G R QS + AF++ EKA Q A Y LG
Sbjct: 134 FGGSKVLEKAENGDAEAQFEMGFRFFEGRSNPQSYENAFFWWEKAAAQGEARAQYNLGFC 193
Query: 168 YLTGDCVKKDIASAL 182
YL G V K+ A+
Sbjct: 194 YLEGIFVDKNQEKAI 208
>gi|395503786|ref|XP_003756243.1| PREDICTED: protein sel-1 homolog 1 [Sarcophilus harrisii]
Length = 848
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 459 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 518
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ AL F +A+E+G + GS+ G+ V
Sbjct: 519 PVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 554
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 452 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 508
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 509 GMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 568
Query: 189 SEKGH 193
S+ GH
Sbjct: 569 SQGGH 573
>gi|355718374|gb|AES06245.1| sel-1 suppressor of lin-12-like protein [Mustela putorius furo]
Length = 591
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 197 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 256
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 257 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 292
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 190 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 246
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 247 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 306
Query: 189 SEKGH 193
S+ GH
Sbjct: 307 SQGGH 311
>gi|384896389|ref|YP_005770378.1| cysteine-rich protein X [Helicobacter pylori 35A]
gi|315587005|gb|ADU41386.1| cysteine-rich protein X [Helicobacter pylori 35A]
Length = 295
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 89 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 148
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 149 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRSVPSNYAK 195
>gi|237746386|ref|ZP_04576866.1| predicted protein [Oxalobacter formigenes HOxBLS]
gi|229377737|gb|EEO27828.1| predicted protein [Oxalobacter formigenes HOxBLS]
Length = 377
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
LL D A GDP+A++ELG R ++D A +++ A +Q + A LG +Y G
Sbjct: 245 LLKDRAEEGDPEARFELGRRYLQGVGLERNDIMALHWVRAAAEQGYARAQAGLGWMYAVG 304
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
V++D + + RA+++G+ A G +G+ V
Sbjct: 305 RGVERDETQSFIWYERAAKEGYPVAQRMLGKCYEKGIGV 343
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 65 IPLLKTAKEN-----FELAL---EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDA 116
+ +L A+E+ FEL L A+ + AR+ L + +L+ M + A
Sbjct: 226 VAVLSAAEEDKADRLFELVLLKDRAEEGDPEARFELGRRYLQGVGLERNDIMALHWVRAA 285
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G AQ LG V + + Q+F + E+A + +P A +LG Y G V K
Sbjct: 286 AEQGYARAQAGLGWMYAVGRGVERDETQSFIWYERAAKEGYPVAQRMLGKCYEKGIGVGK 345
Query: 177 DIASALWCFHRASEKG 192
D A A + +A+ +G
Sbjct: 346 DRAMAKVWYEKAAAQG 361
>gi|417706276|ref|ZP_12355339.1| hypothetical protein SFVA6_1092 [Shigella flexneri VA-6]
gi|420329869|ref|ZP_14831572.1| sel1 repeat family protein [Shigella flexneri K-1770]
gi|333007445|gb|EGK26925.1| hypothetical protein SFVA6_1092 [Shigella flexneri VA-6]
gi|391258769|gb|EIQ17856.1| sel1 repeat family protein [Shigella flexneri K-1770]
Length = 327
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 68
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG--VQVPECLTKLNAK 220
LG Y KD A++ +A+ +GH A+ A G +L RG E +T
Sbjct: 69 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIA 128
Query: 221 RVSAAKKARANL 232
S A+ NL
Sbjct: 129 AESGMSYAQNNL 140
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 190 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 249
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 250 YMYKHGQGVEKDYQAAFEWFTKAAE 274
>gi|402490425|ref|ZP_10837214.1| hemaglutinin protein [Rhizobium sp. CCGE 510]
gi|401810451|gb|EJT02824.1| hemaglutinin protein [Rhizobium sp. CCGE 510]
Length = 1260
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GD A +E+G R + + DQ QA + + + D+ A Y LG++Y G
Sbjct: 981 LADAARSGDVLALFEIGARYSDGRNGITVDQKQAAGWYQLSADKGFAPAQYRLGSMYEKG 1040
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
+ V++DI A + +A+ +G+A A A+ Y S
Sbjct: 1041 NGVERDITKAKGFYEQAASQGNASAMHNLAVLYAS 1075
>gi|331651660|ref|ZP_08352679.1| Sel1 repeat superfamily [Escherichia coli M718]
gi|331049938|gb|EGI21996.1| Sel1 repeat superfamily [Escherichia coli M718]
Length = 184
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 102 PGACKAMGAALLVDAANMGDPDAQYELG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
PG+ AA + A + G +QY LG L + Q QA Y+ E++ +Q +P A
Sbjct: 44 PGSLPFTTAATELSAIH-GHSTSQYRLGEFYLHGSDGKPQDYTQARYWYEQSAEQENPRA 102
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
LG +YL G VK D A+ + A+E+G+A A G + G +
Sbjct: 103 QSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGI 152
>gi|117924831|ref|YP_865448.1| hypothetical protein Mmc1_1533 [Magnetococcus marinus MC-1]
gi|117608587|gb|ABK44042.1| TPR repeat SEL1 subfamily-like protein [Magnetococcus marinus MC-1]
Length = 976
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLL 164
++ G L A +GD +AQ+ LG V + ++A Y+ A +Q A + L
Sbjct: 313 ARSRGVRWLQKGAELGDANAQFRLGLAYAQGEGVVVNPERAIYWYTLASEQGEVSAQFNL 372
Query: 165 GTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+Y G V++D A + F ASE+G A G + G +P
Sbjct: 373 ALLYYQGRLVEQDFTKARFWFEHASEQGDVQARDHLGDIYRHGRGIP 419
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A G P+AQ+ LG L + + +A ++ KA +Q A LGT+Y G+
Sbjct: 716 LKKGAEGGSPEAQFHLGYMLHLGVGLAPNAHRAVHWYRKAAEQGFAEAANNLGTLYFQGN 775
Query: 173 CVKKDIASALWCFHRASEKGHAGA 196
V +D+ A+ + R ++ GH A
Sbjct: 776 GVDRDVFKAVEWYTRGAKLGHVPA 799
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 88 ARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFY 147
AR +LSK + Y+ +G L +AA G DAQ LG L + Q +QA
Sbjct: 660 ARIYLSKENSHYN-----PELGERFLREAAEQGGADAQALLGVLLTFKTPLKQDYEQALR 714
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+++K + P A + LG + G + + A+ + +A+E+G A AA G+L +G
Sbjct: 715 WLKKGAEGGSPEAQFHLGYMLHLGVGLAPNAHRAVHWYRKAAEQGFAEAANNLGTLYFQG 774
Query: 208 VQVPECLTKLNAKRVSAAKKARANLESNLMN 238
V + K AK NL N
Sbjct: 775 NGVDRDVFKAVEWYTRGAKLGHVPALHNLGN 805
>gi|384893095|ref|YP_005767188.1| cysteine-rich protein X [Helicobacter pylori Cuz20]
gi|308062392|gb|ADO04280.1| cysteine-rich protein X [Helicobacter pylori Cuz20]
Length = 256
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|145629738|ref|ZP_01785534.1| hypothetical protein CGSHi22121_00677 [Haemophilus influenzae
22.1-21]
gi|144978075|gb|EDJ87854.1| hypothetical protein CGSHi22121_00677 [Haemophilus influenzae
22.1-21]
Length = 219
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A GD + Q+ LG Q D +A + KA +Q H A + LG +Y G
Sbjct: 51 LWLPMAEQGDANVQFNLGVMYEDGLGVKQDDFEAVKWYRKAAEQGHAKAQFNLGVMYAKG 110
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
VK+D A+ + +A+E+G+A A GS G V +
Sbjct: 111 QGVKQDDFKAVKWYRKAAEQGYADAQANLGSAYSAGRGVRQ 151
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 138 YVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
Y QSD Q AF +Q + LG +Y G VK+D A+ + +A+E+GHA A
Sbjct: 40 YEQSDYQTAFKLWLPMAEQGDANVQFNLGVMYEDGLGVKQDDFEAVKWYRKAAEQGHAKA 99
Query: 197 AIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G + +G V + K AA++ A+ ++NL
Sbjct: 100 QFNLGVMYAKGQGVKQDDFKAVKWYRKAAEQGYADAQANL 139
>gi|381156760|ref|ZP_09865998.1| TIGR02452 family protein [Thiorhodovibrio sp. 970]
gi|380881743|gb|EIC23829.1| TIGR02452 family protein [Thiorhodovibrio sp. 970]
Length = 1352
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 107 AMGAALLVDAANMGDPDAQYELG--CR--LRVENDYVQSDQQAFYYIEKAVDQLHPGALY 162
A A +AA G PDAQ++L C + VE D A + +KA +Q H A +
Sbjct: 1096 AAAIAWYREAARQGSPDAQFKLAEMCETGIGVERDI----DTALLWYQKAAEQRHMDAAF 1151
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+G +Y +G V+ D + AL + +++ GH A G + G V
Sbjct: 1152 RIGELYESGQGVEPDCSKALSWYRKSARDGHCSAPHKLGQMYENGYGV 1199
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLH---PGALYLLGTVYLTGD 172
A G D Q+ LG Q+ +AF + KA H P A Y LG +Y G
Sbjct: 1213 GAEQGHCDDQFCLGKMYEDGRGVSQNLAKAFAWYRKAASDGHHGSPAAKYRLGLMYEAGR 1272
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
VK+D+ A F+ A+ +GH A G + G
Sbjct: 1273 GVKQDLFQARARFYSAAWRGHQEAEFKLGGMYEAG 1307
>gi|451982335|ref|ZP_21930653.1| putative Beta-lactamase [Nitrospina gracilis 3/211]
gi|451760500|emb|CCQ91937.1| putative Beta-lactamase [Nitrospina gracilis 3/211]
Length = 194
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 133 RVEND--------YVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALW 183
RV++D Y QSD ++AF + KA + H A LG +Y TG V++D +AL
Sbjct: 31 RVQSDWYQKGDAAYEQSDYKEAFAWYRKAAEAGHVEAQTQLGMMYATGQGVRQDYDAALA 90
Query: 184 CFHRASEKGHAGAAIAYGSLLLRGVQVP 211
+A+E GH A G L + G +P
Sbjct: 91 WTRKAAESGHVRAQTNLGILYMTGFGIP 118
>gi|145637539|ref|ZP_01793196.1| hypothetical protein CGSHiHH_04225 [Haemophilus influenzae PittHH]
gi|145269225|gb|EDK09171.1| hypothetical protein CGSHiHH_04225 [Haemophilus influenzae PittHH]
Length = 184
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLT 170
L + A GD AQY LG + V V+ D +A + KA +Q A + LG +Y
Sbjct: 51 LWLPLAEQGDVKAQYNLG-NMYVNGRGVKQDGFEAVKWYRKAAEQGLANAQFNLGVMYYE 109
Query: 171 GD-CVKKDIASALWCFHRASEKGHAGAAIAYGSLLL--RGVQVPECLTK 216
G VK+D A+ + +A+E+G+A A G+L L +GVQV + L K
Sbjct: 110 GGRGVKQDYFEAVKWYRQAAEQGYAQAQFMLGALYLLGKGVQVNKSLAK 158
>gi|398896672|ref|ZP_10647722.1| Sel1 repeat protein [Pseudomonas sp. GM55]
gi|398178147|gb|EJM65803.1| Sel1 repeat protein [Pseudomonas sp. GM55]
Length = 184
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
N Q +QA +KA ++ A Y LG Y G V +D+ AL F +AS +GHA
Sbjct: 41 NTQSQDLEQALAACQKASNEGDAQAQYELGEFYYEGRNVPRDLNQALSYFEKASLQGHAQ 100
Query: 196 AAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEK-----AKEQFEVA 250
A G++ G VP N + K A N + ++ ++ +E+ EVA
Sbjct: 101 AQFKLGTMFFHGEGVPAN----NVQAYILLKMAAVNGAEDALDTADEVTEKMPREELEVA 156
Query: 251 AQAGCNLGLRWLQRIEEEEKR 271
Q + ++L ++ + R
Sbjct: 157 TQVLGQIFRKYLMELQSADGR 177
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A+N GD AQYELG E V D QA Y EKA Q H A + LGT++ G+ V
Sbjct: 57 ASNEGDAQAQYELG-EFYYEGRNVPRDLNQALSYFEKASLQGHAQAQFKLGTMFFHGEGV 115
Query: 175 KKDIASALWCFHRASEKG 192
+ A A+ G
Sbjct: 116 PANNVQAYILLKMAAVNG 133
>gi|123503783|ref|XP_001328599.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121911544|gb|EAY16376.1| hypothetical protein TVAG_359850 [Trichomonas vaginalis G3]
Length = 2338
Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 39 LIAKGWSALKEVDRVIDYCEL----------NDRRLIPLLKTAKENFELALE--ADNSNT 86
++ G+ K+++R Y EL N+ L+ + K KEN L + AD N
Sbjct: 2088 MLKNGYGVHKDIERAQKYFELSAKQNDPVGLNNLGLVLMEKGDKENATLLFKKSADLGNI 2147
Query: 87 HA--RYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQ 144
A Y LS+++ A +A G+ D+Q +LG LR + Q
Sbjct: 2148 KAMYNYGLSRINDD-------PMESARYFQMSAEKGNSDSQLKLGMMLRSGDVLPQDLIT 2200
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
A +YI + Q + A+ +LG + G+ K+ A F A++ G+ A + YG +L
Sbjct: 2201 ALHYIVLSAKQGNVNAMCVLGRMLKQGEGTTKNPTLAAKYFLFAAKHGNNIAMLNYGLML 2260
Query: 205 LRGVQVPECL------TKLNAKRVSA-AKKARANLESNLMNPVEKAKEQ----FEVAAQA 253
G V + + K++A +A A+ A + SN N +EK +E F++AAQ
Sbjct: 2261 KDGTGVDQNIEESVKFIKMSADSGNAEAQCYYATMLSNGKN-IEKNREMAINYFKLAAQQ 2319
Query: 254 GCNLGLRWLQRIEEEEKR 271
+ + L+R+++ +++
Sbjct: 2320 DFSPAKKCLERLQKPKRK 2337
Score = 44.3 bits (103), Expect = 0.054, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN 136
L+ AD A + LS+++ K M L +AN G+ DA + G LR +
Sbjct: 347 LSSAADADIPEANFILSQIYEKGISVEKNSEMAMKYLRLSANQGNIDAMFRYGTMLREGH 406
Query: 137 DYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
Q+ Q+A + A ++ A G G VK+D A F +A+++ +A A
Sbjct: 407 GIAQNLQEAAQIFQDAAERGDVQAKNKFGLFLRNGIGVKRDYIKAASLFKQAADQNYAEA 466
Query: 197 AIAYGSLLLRGVQVPECLTKLNAKRVSAA 225
YG ++ G VP+ +K++AK V A
Sbjct: 467 QNNYGVMIKLGEGVPKN-SKISAKFVEKA 494
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L+ AA+ +P +Q+E G L Q+ +Q IEKA +P A + + G
Sbjct: 1124 LVKTAADFDNPQSQFEYGTCLFEGRGIEQNIRQGKNLIEKAAVAGNPDAQFYIAKELEKG 1183
Query: 172 DCVKKDIASALWCFHRASEKGHAGA 196
D +++D+ A + A+E H+GA
Sbjct: 1184 DKIEQDLEKAAEYYGEAAENDHSGA 1208
>gi|62511130|sp|Q9ESM7.1|SE1L1_MESAU RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|9967440|dbj|BAB12403.1| SEL1L [Mesocricetus auratus]
Length = 794
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G +
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGI 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>gi|420494429|ref|ZP_14992997.1| cysteine-rich protein X [Helicobacter pylori Hp P-16]
gi|393110109|gb|EJC10635.1| cysteine-rich protein X [Helicobacter pylori Hp P-16]
Length = 256
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG ++ ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKNYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|420395857|ref|ZP_14895082.1| cysteine-rich protein X [Helicobacter pylori CPY1124]
gi|393012217|gb|EJB13398.1| cysteine-rich protein X [Helicobacter pylori CPY1124]
Length = 256
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAMEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|255321165|ref|ZP_05362331.1| TPR repeat, SEL1 subfamily protein [Acinetobacter radioresistens
SK82]
gi|262380147|ref|ZP_06073302.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|421464474|ref|ZP_15913164.1| Sel1 repeat protein [Acinetobacter radioresistens WC-A-157]
gi|421855053|ref|ZP_16287435.1| hypothetical protein ACRAD_05_00720 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255301719|gb|EET80970.1| TPR repeat, SEL1 subfamily protein [Acinetobacter radioresistens
SK82]
gi|262298341|gb|EEY86255.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|400205227|gb|EJO36208.1| Sel1 repeat protein [Acinetobacter radioresistens WC-A-157]
gi|403189553|dbj|GAB73636.1| hypothetical protein ACRAD_05_00720 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 196
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
MG LV AA G P AQ+ L + D + ++QAF + + A DQ A +G +
Sbjct: 40 MGINDLVKAAKAGQPGAQFYLATHYQYGKDIQKDEKQAFAWFKAAADQGLSAAQLNVGRM 99
Query: 168 YLTGDCVKKDIASALWCFHRASEKG 192
Y G VKKD A F +A+ G
Sbjct: 100 YADGIGVKKDEILARRYFEKAASSG 124
>gi|262165459|ref|ZP_06033196.1| hypothetical protein VMA_001905 [Vibrio mimicus VM223]
gi|262025175|gb|EEY43843.1| hypothetical protein VMA_001905 [Vibrio mimicus VM223]
Length = 337
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 95 LHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVD 154
L L + P A A A L+ A +P AQY+L + QS +AFY+ +A +
Sbjct: 8 LFLLFSFPLAA-ADDVAELIKLAKEQNPQAQYQLALAYQAGTSTPQSLNEAFYWFLQAAE 66
Query: 155 QLHPGALYLLGTVYLTGDCVKKD 177
Q +P A+ + + ++TG ++KD
Sbjct: 67 QDYPAAMAQVASAFMTGQGIEKD 89
>gi|256819152|ref|YP_003140431.1| Sel1 domain-containing protein repeat-containing protein
[Capnocytophaga ochracea DSM 7271]
gi|256580735|gb|ACU91870.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea DSM 7271]
Length = 811
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + +A+Y L++ + G L A+ G+P+AQ EL R Q
Sbjct: 66 AETGDLNAQYQLAQCYFNGKGVSKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVEQ 125
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
S ++ + IEK ++ +P L Y +G+ V KD+ A + +AS+ G++ A +
Sbjct: 126 SKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAELLL 185
Query: 201 GSLLLR-GVQVPEC---LTKLNAKRVSAAKK--ARANLESNLMNPVE-KAKEQFEVAAQA 253
S PE LT++ K + A++ A A LE + E KA E E AA+
Sbjct: 186 ASWTYEVNASNPEAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKG 245
Query: 254 G 254
G
Sbjct: 246 G 246
>gi|301618001|ref|XP_002938416.1| PREDICTED: protein sel-1 homolog 1 [Xenopus (Silurana) tropicalis]
Length = 822
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A Y KA D +P LG YL G V
Sbjct: 424 AANAGNSHAMAFLGKMYSEGSDTVIQSNETALQYFRKAADMGNPVGQSGLGMAYLYGRGV 483
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
D AL F +A+E+G + GS+ G+ V
Sbjct: 484 PVDYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 519
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y+LG ++ E++ ++AF+Y KA D H A+ ++ L GD +K++I SA
Sbjct: 207 YQLGMKILNESNKRSQKKEAFHYFMKASDMNHIKAMEMVAYALLFGDPIKQNIPSAKELL 266
Query: 186 HRASEKGHAGAAIAYGSLLLRGV 208
+ +E+G +A G L G+
Sbjct: 267 EKLAEQGSPRGQMALGFLYASGL 289
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 75 FELALEADNS-NTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCR 131
FE +A N+ N+HA +L K++ + ++ AL AA+MG+P Q LG
Sbjct: 418 FEYFNQAANAGNSHAMAFLGKMYSE-GSDTVIQSNETALQYFRKAADMGNPVGQSGLGMA 476
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
A Y +KA +Q LG++Y G VKKD AL F+ AS+
Sbjct: 477 YLYGRGVPVDYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQALKYFNLASQG 536
Query: 192 GHAGAAIAYGSLLLRGVQV 210
GH A G + G V
Sbjct: 537 GHILAFYNLGQMHATGTGV 555
>gi|229529719|ref|ZP_04419109.1| hypothetical protein VCG_002816 [Vibrio cholerae 12129(1)]
gi|229333493|gb|EEN98979.1| hypothetical protein VCG_002816 [Vibrio cholerae 12129(1)]
Length = 350
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A +P AQY+L + ++ Q+ +AFY+ +A + HP A+ + YLTG
Sbjct: 37 LTQPAQEQNPQAQYQLALAYQTGSNTPQNLNEAFYWFLQAAELNHPPAMAQVANAYLTGQ 96
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV-QVPECLTKLNAKRVSAAKKARAN 231
V+KD A + + + G+ A G+ L + Q P + L+ + A +
Sbjct: 97 GVEKDPLQAQYWLIKLALAGNPQA----GTTLAKWYEQHPTAIAALDLAEIWYRVNANQD 152
Query: 232 LES 234
LES
Sbjct: 153 LES 155
>gi|29612522|gb|AAH49959.1| Sel1l protein [Mus musculus]
Length = 569
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 179 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 238
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV----PECLTKLNAKRVSAAKKARA 230
+ + AL F +A+E+G + GS+ G+ V + L N A
Sbjct: 239 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFY 298
Query: 231 NLE------SNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRI 265
NL + +M A E F+ + G RW +R+
Sbjct: 299 NLAQMHASGTGVMRSCHTAVELFKNVCERG-----RWSERL 334
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 172 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 228
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 229 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 288
Query: 189 SEKGH 193
S+ GH
Sbjct: 289 SQGGH 293
>gi|348688505|gb|EGZ28319.1| hypothetical protein PHYSODRAFT_309220 [Phytophthora sojae]
Length = 614
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQ-SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G DAQ+ELG + +D +A + KA DQ H GA LG ++L G V
Sbjct: 319 AAEQGHRDAQFELGMFYEHGRGGCEPNDMEAATWYAKAADQGHTGAEASLGRLFLVGTHV 378
Query: 175 KKDIASALWCFHRASEK-GHAGAAIAYGS----LLLRGVQVPECLTKLNAKRVSAAKKAR 229
++D+ A+ RA+ K AG+++A LLL Q + L + SA + R
Sbjct: 379 QQDVVKAVHFLQRAAVKAADAGSSVAMTRLASLLLLDTPQTSDVAAALTSTSSSAQFRDR 438
>gi|268557594|ref|XP_002636787.1| C. briggsae CBR-SEL-1 protein [Caenorhabditis briggsae]
Length = 685
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA G DA LG + D Q+AF Y+ K+ D+ P A +LG +Y+TG
Sbjct: 317 LTSAAESGSSDALTYLGKMYLDGTAFTPKDYQRAFEYLTKSADKSSPSAQAVLGAMYMTG 376
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
VKK+ AL +++K +A + L +GV
Sbjct: 377 KGVKKNYEKALKLLTLSADKKNADGQMYLADLNYKGV 413
>gi|384424339|ref|YP_005633697.1| hypothetical protein VCLMA_A1045 [Vibrio cholerae LMA3984-4]
gi|327483892|gb|AEA78299.1| hypothetical protein VCLMA_A1045 [Vibrio cholerae LMA3984-4]
Length = 338
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A +P AQY+L + ++ Q+ +AFY+ +A + HP A+ + YLTG
Sbjct: 25 LTQPAQEQNPQAQYQLALAYQTGSNTPQNLNEAFYWFLQAAELNHPPAMAQVANAYLTGQ 84
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV-QVPECLTKLNAKRVSAAKKARAN 231
V+KD A + + + G+ A G+ L + Q P + L+ + A +
Sbjct: 85 GVEKDPLQAQYWLIKLALAGNPQA----GTTLAKWYEQHPTAIAALDLAEIWYRVNANQD 140
Query: 232 LES 234
LES
Sbjct: 141 LES 143
>gi|386748446|ref|YP_006221654.1| hypothetical protein HCD_07265 [Helicobacter cetorum MIT 99-5656]
gi|384554688|gb|AFI06444.1| hypothetical protein HCD_07265 [Helicobacter cetorum MIT 99-5656]
Length = 258
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 115 DAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
DA G+ A LG + ++D++A Y +KAVD+ P LG +Y G V
Sbjct: 55 DAIKNGESLAYVLLGIMYKNGRGVAKNDKKAVEYFQKAVDRDVPRGYNNLGVMYKEGRGV 114
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
KD A+ F A++KG+ A + G + + G VP K
Sbjct: 115 AKDEKKAVEYFQLAADKGYTNAYMNLGIMYMEGRGVPSNYMK 156
>gi|354594857|ref|ZP_09012894.1| hypothetical protein CIN_15900 [Commensalibacter intestini A911]
gi|353671696|gb|EHD13398.1| hypothetical protein CIN_15900 [Commensalibacter intestini A911]
Length = 635
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEN-DYV 139
A+ N A+Y L K++ + + A + G L AAN G +AQYELG D+
Sbjct: 72 ANQGNIEAQYRLGKIYCEGGLISADTSKGLEWLAKAANNGSVNAQYELGSLYASGGKDFP 131
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCVKKDIASALWCFHRASEKGHAGA 196
++++A ++ KA + A + LG +Y G + V KD AL + +A++ G+ A
Sbjct: 132 ANNEKALIWLNKAANNGSNQAQFELGYIYHEGNNGVSKDEGKALKLYIQAADNGNDNA 189
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 19/170 (11%)
Query: 84 SNTHARYWLSKLHLKYH-VPGAC-KAMGAAL---------------LVDAANMGDPDAQY 126
+N A+Y L L+LK VP KA+G + L AAN G AQY
Sbjct: 295 NNDEAQYQLGMLYLKGKGVPKDTQKALGLFIKAVTNNWGNKGALEQLTKAANNGSVKAQY 354
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
LG D Q DQ+ Y+ KA A +LG +Y + +D A F
Sbjct: 355 ALGKIYADNKDIPQQDQKTIEYLTKAASNGCIKAQVMLGEIYYGDTNIPEDTDKAFKWFT 414
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+A+ +G+A A S+ L + K K +A+ K +AN + N+
Sbjct: 415 KAANQGNAEAQRQLSSIYLYNYHNSQQGLKWLIK--AASNKKQANYQYNI 462
>gi|302918345|ref|XP_003052638.1| hypothetical protein NECHADRAFT_35947 [Nectria haematococca mpVI
77-13-4]
gi|256733578|gb|EEU46925.1| hypothetical protein NECHADRAFT_35947 [Nectria haematococca mpVI
77-13-4]
Length = 969
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 89/218 (40%), Gaps = 28/218 (12%)
Query: 60 NDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGAC---KAMGAALLVDA 116
N R + LK A E AD N HA + L L+ A +A +L + A
Sbjct: 760 NPREAVGWLKRAAE------RADAENPHALHELGLLYESAQPNDAIIRDEAYAYSLFLQA 813
Query: 117 ANMGDPDAQYELGCRLR--VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD-- 172
A +G +QY LGC + + Q +Y + A + H L L G YLTG
Sbjct: 814 AELGYKFSQYRLGCAFEYGLLGCPIDPRQSIMWYSKAATQEEHQAELALSGW-YLTGSEN 872
Query: 173 -CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+ D + LW +A+ G A A A G G+ VP L +AKR A+
Sbjct: 873 VLGQSDQEAYLWA-RKAAIAGLAKAEYAMGYFTEVGIGVPPNLE--DAKRWYWRAAAQE- 928
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEEE 269
KA+E+ E +AG N G+R +RI +
Sbjct: 929 --------FPKARERLEDLKRAGKN-GVRQRERISRSK 957
>gi|114776923|ref|ZP_01451966.1| hypothetical protein SPV1_11926 [Mariprofundus ferrooxydans PV-1]
gi|114553009|gb|EAU55440.1| hypothetical protein SPV1_11926 [Mariprofundus ferrooxydans PV-1]
Length = 633
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ N A Y L+ L+ Y A +A L AA GD +AQ + +
Sbjct: 436 AEQGNADAMYNLAVLY--YRKEDAARAF--ELFERAAKAGDSEAQNIIASMYQRAQGTAF 491
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA--AI 198
+ QA + EKA + A + LG +Y GD V++ + AL+ + +A+E G A A +
Sbjct: 492 NMPQAIAWYEKAAQSGYAPAQFNLGNLYRKGDGVEQKDSKALYWYKKAAESGFAPAQNTL 551
Query: 199 AYGSLLLRGVQV 210
AY L RGV V
Sbjct: 552 AYMYALGRGVAV 563
>gi|124504919|ref|XP_001351202.1| SEL-1 like protein [Plasmodium falciparum 3D7]
gi|3764003|emb|CAA15596.1| SEL-1 like protein [Plasmodium falciparum 3D7]
Length = 807
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
GD A Y+LG + + E ++ +QAF YI +A + + AL LG +YL G V+KDI
Sbjct: 449 GDVMAMYDLGKKYKEEKNF----KQAFKYINEASKKNNLLALKELGIIYLYGYGVQKDIN 504
Query: 180 SALWCFHRASEKG 192
++ F +A+E G
Sbjct: 505 KSIENFSKAAEAG 517
>gi|325267701|ref|ZP_08134352.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980825|gb|EGC16486.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 380
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG Q D +A + ++A +Q + A LLG +Y G V+
Sbjct: 284 AAAQGDAPAQTNLGVMYVTGRGVHQDDAEAVKWFQQAAEQGYSPAQVLLGAMYKNGQGVR 343
Query: 176 KDIASALWCFHRASEKGHAGAAI 198
+D A A+ + +A+E+G A A +
Sbjct: 344 QDDAEAVKWYRQAAEQGFAPAQV 366
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y LG Q D +A + +A Q A LG +Y+TG V +D A A+ F
Sbjct: 258 YNLGTMYENGQGVRQDDAEAVKWYRQAAAQGDAPAQTNLGVMYVTGRGVHQDDAEAVKWF 317
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQV 210
+A+E+G++ A + G++ G V
Sbjct: 318 QQAAEQGYSPAQVLLGAMYKNGQGV 342
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG Q D +A + ++A Q A Y LGT+Y G V+
Sbjct: 212 AAEQGVASAQYNLGLMYSNGRGVRQDDAEAVKWFQQAAAQGFAQAQYNLGTMYENGQGVR 271
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A A+ + +A+ +G A A G + + G
Sbjct: 272 QDDAEAVKWYRQAAAQGDAPAQTNLGVMYVTG 303
>gi|217971692|ref|YP_002356443.1| Sel1 domain-containing protein repeat-containing protein
[Shewanella baltica OS223]
gi|217496827|gb|ACK45020.1| Sel1 domain protein repeat-containing protein [Shewanella baltica
OS223]
Length = 511
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
M A L A GD QYELG + + A ++EKA Q HP A Y LG +
Sbjct: 127 MLEAQLKPNAEAGDATFQYELGLLYERQPLLDPNATHAIDWLEKAAAQQHPDADYHLGAL 186
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
Y V D A A F +A+ G A G++LL G P+ + + A
Sbjct: 187 YWHDKRVTSDFAKARQYFEKAAANGDELAKEHLGNMLLAGQGGPKDVARAEA 238
>gi|421673887|ref|ZP_16113824.1| Sel1 repeat protein [Acinetobacter baumannii OIFC065]
gi|421690162|ref|ZP_16129833.1| Sel1 repeat protein [Acinetobacter baumannii IS-116]
gi|404564434|gb|EKA69613.1| Sel1 repeat protein [Acinetobacter baumannii IS-116]
gi|410386105|gb|EKP38589.1| Sel1 repeat protein [Acinetobacter baumannii OIFC065]
Length = 209
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 120 GDPDAQYELGC----RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
G+ DAQ +LG L V DY+ + Q + EKA Q + A Y LG +Y G+ +
Sbjct: 16 GNADAQVKLGLLYIQGLGVPQDYILARQ----WFEKAAKQGNRDAEYNLGVIYENGNGIP 71
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
++ A + +A+EKG + A G+L GV V +
Sbjct: 72 QNYKLAAEWYQKAAEKGRSNAQYNLGNLYANGVGVAQ 108
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DA+Y LG N Q+ + A + +KA ++ A Y LG +Y G V
Sbjct: 48 AAKQGNRDAEYNLGVIYENGNGIPQNYKLAAEWYQKAAEKGRSNAQYNLGNLYANGVGVA 107
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+D A F +A+E+G+A + G + G
Sbjct: 108 QDYKIAKEWFEKAAEQGNADGEYSLGVMYEYG 139
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 73 ENFELALE-----ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYE 127
+N++LA E A+ ++A+Y L L+ + AA G+ D +Y
Sbjct: 72 QNYKLAAEWYQKAAEKGRSNAQYNLGNLYANGVGVAQDYKIAKEWFEKAAEQGNADGEYS 131
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHR 187
LG + Q + A + +KA Q + A + LG +Y G V K+ A +
Sbjct: 132 LGVMYEYGDGTAQDYKIAVEWYQKAATQGNVNAQFNLGILYAKGLGVSKNYEIAKQWIEK 191
Query: 188 ASEKGHAGAAI 198
A+E+GH A I
Sbjct: 192 AAEQGHENAKI 202
>gi|194910259|ref|XP_001982100.1| GG12409 [Drosophila erecta]
gi|190656738|gb|EDV53970.1| GG12409 [Drosophila erecta]
Length = 824
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 116 AANMGDPDAQYELGCR----LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
A+ MGDP Q LG L V D ++ A Y +A DQ LG +Y TG
Sbjct: 405 ASEMGDPVGQSGLGLMYLNGLGVPRDSIK----ALSYFTQAADQGWVDGQLQLGNMYFTG 460
Query: 172 DCVKKDIASALWCFHRASEKGHA------GAAIAYGSLLLRGVQVPECLTKLNAKRVSAA 225
+ VK D A F+ A++ GH G AYG +LR K ++R +
Sbjct: 461 NGVKTDYKLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWS 520
Query: 226 KKARANLESNLMNPVEKAKEQFEVAAQAG 254
+ N +++A Q+ + A+ G
Sbjct: 521 SRLMHAYSDYKDNRIDEAYMQYSLMAEVG 549
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCV 174
A+ GD +Q LG Q D Q+A Y KA + LG +YL G D +
Sbjct: 332 ADKGDIQSQVGLGQLYYQGGKVTQQDHQKALEYFTKAATAGNAVGFAFLGKLYLEGSDQI 391
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
K D +A F +ASE G G + L G+ VP
Sbjct: 392 KADNDAAFKYFSKASEMGDPVGQSGLGLMYLNGLGVP 428
>gi|416896146|ref|ZP_11926010.1| hypothetical protein ECSTEC7V_0781 [Escherichia coli STEC_7v]
gi|327254328|gb|EGE65950.1| hypothetical protein ECSTEC7V_0781 [Escherichia coli STEC_7v]
Length = 325
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+Y G V+KD +A F +A+E +A A
Sbjct: 248 YMYKHGQSVEKDYQAAFEWFTKAAECDNATA 278
>gi|170682713|ref|YP_001742761.1| hypothetical protein EcSMS35_0664 [Escherichia coli SMS-3-5]
gi|422827848|ref|ZP_16876021.1| hypothetical protein ESNG_00526 [Escherichia coli B093]
gi|170520431|gb|ACB18609.1| hypothetical protein EcSMS35_0664 [Escherichia coli SMS-3-5]
gi|371616274|gb|EHO04640.1| hypothetical protein ESNG_00526 [Escherichia coli B093]
Length = 325
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +V A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIEKIVKRAEKGDSEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGRKYSEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFMKAAE 272
>gi|421718677|ref|ZP_16157973.1| sel1 repeat family protein [Helicobacter pylori R038b]
gi|407219777|gb|EKE89589.1| sel1 repeat family protein [Helicobacter pylori R038b]
Length = 244
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 38 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 97
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 98 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 144
>gi|384897788|ref|YP_005773216.1| cysteine-rich protein X [Helicobacter pylori Lithuania75]
gi|317012893|gb|ADU83501.1| cysteine-rich protein X [Helicobacter pylori Lithuania75]
Length = 256
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|237746366|ref|ZP_04576846.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377717|gb|EEO27808.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 538
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 46 ALKEVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGAC 105
AL E+ + E ND++ + A AD + A+ L L+++
Sbjct: 161 ALGELYEAGEGVERNDKKAAFWYQKA---------ADQGHLKAQAKLGILYMEGRGVKRD 211
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
A A+LL +AA G AQ LG S +A + KA Q GA + LG
Sbjct: 212 DARAASLLSNAARHGIAVAQANLGLLYASGRGVAASTNKALEWYRKAASQGEAGAQFSLG 271
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
+Y G V+KD+ A + +A+E+G+A A G L + G
Sbjct: 272 NMYEDGTGVEKDLVKAAVWYRKAAEQGNAEAQNNLGRLYMEG 313
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G DAQ+ LG ++D++A ++ +KA DQ H A LG +Y+ G VK
Sbjct: 150 AAEHGRMDAQFALGELYEAGEGVERNDKKAAFWYQKAADQGHLKAQAKLGILYMEGRGVK 209
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A A+ G A A G L G V K AA + A + +
Sbjct: 210 RDDARAASLLSNAARHGIAVAQANLGLLYASGRGVAASTNKALEWYRKAASQGEAGAQFS 269
Query: 236 LMNPVE 241
L N E
Sbjct: 270 LGNMYE 275
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 116 AANMGDPDAQYELGCRLRVE-NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G+ +AQ LG RL +E +D+ + +AF + ++A DQ A LG +Y G V
Sbjct: 294 AAEQGNAEAQNNLG-RLYMEGDDFEGHEDEAFVWFQRAADQGFAEAQTNLGVLYAYGLGV 352
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+D+ A++ + +A+E+G A RG V
Sbjct: 353 DQDVEKAVYWYRQAAEQGQPEGAFFLAEAYYRGEGV 388
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA+ G+ AQ+ LG VE D V++ A +Y KA +Q + A LG +Y+ G
Sbjct: 258 AASQGEAGAQFSLGNMYEDGTGVEKDLVKA---AVWY-RKAAEQGNAEAQNNLGRLYMEG 313
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
D + A F RA+++G A A G L G+ V + + K
Sbjct: 314 DDFEGHEDEAFVWFQRAADQGFAEAQTNLGVLYAYGLGVDQDVEK 358
>gi|432579308|ref|ZP_19815742.1| hypothetical protein A1SK_03069 [Escherichia coli KTE56]
gi|431109010|gb|ELE12981.1| hypothetical protein A1SK_03069 [Escherichia coli KTE56]
Length = 116
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G L RG
Sbjct: 68 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRG 111
>gi|340778891|ref|ZP_08698834.1| TPR repeat-containing protein [Acetobacter aceti NBRC 14818]
Length = 610
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Query: 87 HARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QA 145
+A+YW ++ + A G + AA G DA++ +L V + +D +A
Sbjct: 423 NAQYWYGRMLIDGRGVPANPEEGREWIRKAAVEGMVDAEHHY-AQLLVAGEGGPADHAEA 481
Query: 146 FYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL 205
F E+A Q + +++ LG + G V +D A F +A+E+GH GA + G L
Sbjct: 482 FIMFERAAKQGNANSMFALGAMLGGGHDVPEDRQLAFGWFRQAAERGHVGAQLMMGRYLT 541
Query: 206 RGV----QVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQ 246
RG+ + E L + +A A++ + L P+ +AK +
Sbjct: 542 RGLAGEPDMEEGLVWYRKAEAAGLAQASADM-AQLKFPLREAKPE 585
>gi|344942465|ref|ZP_08781752.1| heat shock protein DnaJ domain protein [Methylobacter tundripaludum
SV96]
gi|344259752|gb|EGW20024.1| heat shock protein DnaJ domain protein [Methylobacter tundripaludum
SV96]
Length = 362
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A G+ DAQ++ G + V+ D+QA ++ KA Q H A LG +Y TG
Sbjct: 195 LYLPLAEQGNVDAQFQAGMIYAMGKGIVEDDKQAAGWLGKAAGQGHREAQTKLGFMYATG 254
Query: 172 DCVKKDIASALWCFHRASEKGHAGA 196
V ++ +A+ F++A+E+G A
Sbjct: 255 KGVAQNYNTAVDWFYKAAEQGDVTA 279
>gi|398931311|ref|ZP_10665113.1| Sel1 repeat protein [Pseudomonas sp. GM48]
gi|398163763|gb|EJM51913.1| Sel1 repeat protein [Pseudomonas sp. GM48]
Length = 184
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%)
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
N Q +QA +KA D+ A Y LG Y G +D+ AL F +AS +GHA
Sbjct: 41 NTQPQDLEQALAACQKASDEGDAQAQYELGEFYYEGKNAPRDLNQALSYFEKASLQGHAQ 100
Query: 196 AAIAYGSLLLRGVQVP 211
A G++ G VP
Sbjct: 101 AQFKLGTMFFHGEGVP 116
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A++ GD AQYELG E D QA Y EKA Q H A + LGT++ G+ V
Sbjct: 57 ASDEGDAQAQYELG-EFYYEGKNAPRDLNQALSYFEKASLQGHAQAQFKLGTMFFHGEGV 115
Query: 175 KKDIASALWCFHRASEKG 192
+ A A+ G
Sbjct: 116 PANNVQAYILLKMAAVNG 133
>gi|261346662|ref|ZP_05974306.1| putative TPR repeat protein [Providencia rustigianii DSM 4541]
gi|282565368|gb|EFB70903.1| putative TPR repeat protein [Providencia rustigianii DSM 4541]
Length = 520
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 112 LLVDAANMGDPDAQ------YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
L +AANMG AQ Y+ G L +N Y QA Y+ ++A +Q GA Y LG
Sbjct: 257 LYREAANMGSSIAQKNMGDFYQKGHPLIEKNSY-----QAVYWYKRAANQGELGAQYALG 311
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
Y GD V +D+A A + A++ A AA+ +G+
Sbjct: 312 QAYEKGDGVGQDLAEAFAWYQLAADNESAEAAMRVAEFYEKGL 354
>gi|209881787|ref|XP_002142331.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557937|gb|EEA07982.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 762
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 121 DPDAQYELG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
DP +G L + Y ++ + AF++ ++ L A + L ++YLTG +
Sbjct: 349 DPGGHNGMGYIYLHGTDSYGKNPRLAFHHFNESAHHLFADAQFNLASMYLTGIGTTQSYT 408
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGV-QVPECLTKLNAKRV 222
SAL + RA E+GH AA A L L G+ + +C ++ R+
Sbjct: 409 SALIWYSRALEQGHVPAAYALAQLHLNGIGTIKDCNLAIDFLRI 452
>gi|421713850|ref|ZP_16153176.1| sel1 repeat family protein [Helicobacter pylori R32b]
gi|407213906|gb|EKE83758.1| sel1 repeat family protein [Helicobacter pylori R32b]
Length = 257
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|417118536|ref|ZP_11969054.1| Sel1 repeat protein [Escherichia coli 1.2741]
gi|422800004|ref|ZP_16848502.1| Sel1 [Escherichia coli M863]
gi|323967591|gb|EGB63007.1| Sel1 [Escherichia coli M863]
gi|386138070|gb|EIG79230.1| Sel1 repeat protein [Escherichia coli 1.2741]
Length = 325
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQS--DQQAFYYIEKAVDQLHPGALY 162
C + +++ A GD +AQY +G ++ + S D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSA-IDSPDDEKAFYWLKLAAEQGHCEAQY 66
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 67 SLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+Y G V+KD +A F +A+E +A A
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFTKAAECDNATA 278
>gi|419419073|ref|ZP_13959340.1| Cysteine-rich protein X [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|384373030|gb|EIE28575.1| Cysteine-rich protein X [Helicobacter pylori NCTC 11637 = CCUG
17874]
Length = 256
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|323450201|gb|EGB06084.1| hypothetical protein AURANDRAFT_29905, partial [Aureococcus
anophagefferens]
Length = 323
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G+ AQ LG L E + ++AF Y A DQ H GA + LG Y+ GD +
Sbjct: 136 AADRGNAVAQTSLGFFLESE----KRHEEAFRYFALAADQGHIGAEFCLGCSYMDGDGTE 191
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV 222
K A+ +W RA E G A I G L G V L K A R+
Sbjct: 192 K--AAKIW--KRAVELGDVDAMINLGMLYEHGSGVK--LDKKKAARL 232
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 130 CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRAS 189
C L D + ++AF Y A +Q + A + LG Y++G C + D+ A + F RA+
Sbjct: 246 CNLAFLLDAEEKHEEAFRYYALAANQGYTRAEHNLGCCYMSGACTEVDVGKARYWFERAA 305
Query: 190 EKGHAGAAIAYGSLLLRGVQVPECLTKLNAK 220
KG+ G+ CL +L+A+
Sbjct: 306 AKGNEGS--------------TRCLARLDAR 322
>gi|303248280|ref|ZP_07334542.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
fructosovorans JJ]
gi|302490305|gb|EFL50217.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
fructosovorans JJ]
Length = 691
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 10/180 (5%)
Query: 66 PLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQ 125
P A++ +E+A +A +S L L K KA+G L+ +AA+ GDP A+
Sbjct: 477 PDFTAARKWYEMAAKAGDSRAQFNLGLMYLTGKGGPADEAKALG--LMREAADQGDPHAR 534
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
+ ++AF + A Q P A +L T Y G V +D SAL+
Sbjct: 535 CNVATMELTGRGTTADPREAFRWYRLAAGQGFPQAQAMLATFYYDGRVVPRDFESALFWL 594
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTK-LNAKRVSAAKKARANLESNLMNP-VEKA 243
AS A LL+R + L + L +++ ++ A+ + +P EKA
Sbjct: 595 TLASRDPGGDA------LLIRAAKAKAALMRQLTPEQLERVRQRVADFSPAVFDPKAEKA 648
>gi|429747727|ref|ZP_19280977.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429162529|gb|EKY04844.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 815
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + +A+Y L++ + G L A+ G+P+AQ EL R Q
Sbjct: 66 AETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVEQ 125
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
S ++ + IEK ++ +P L Y +G+ V KD+ A + +AS+ G++ A +
Sbjct: 126 SKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAELLL 185
Query: 201 GSLLLR-GVQVPEC---LTKLNAKRVSAAKK--ARANLESNLMNPVE-KAKEQFEVAAQA 253
S PE LT++ K + A++ A A LE + E KA E E AA+
Sbjct: 186 ASWTYEVNASNPEAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKG 245
Query: 254 G 254
G
Sbjct: 246 G 246
>gi|428170736|gb|EKX39658.1| hypothetical protein GUITHDRAFT_96582 [Guillardia theta CCMP2712]
Length = 118
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GDPDAQY LG ++D +AF + +A +Q A + LG Y G V+K
Sbjct: 23 AEQGDPDAQYNLGTCYDEGRGVDKNDGEAFKWFARAAEQGDADAQFSLGVCYHEGKGVEK 82
Query: 177 DIASALWCFHRASEKGHAGAAIAYG 201
D A A+ + +A+ + + A G
Sbjct: 83 DDAKAIELWTKAANQNNEDAQFILG 107
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
++D F + + +Q P A Y LGT Y G V K+ A F RA+E+G A A +
Sbjct: 10 ENDVDRFEWYRRRAEQGDPDAQYNLGTCYDEGRGVDKNDGEAFKWFARAAEQGDADAQFS 69
Query: 200 YGSLLLRGVQV 210
G G V
Sbjct: 70 LGVCYHEGKGV 80
>gi|422007128|ref|ZP_16354114.1| hypothetical protein OOC_03252 [Providencia rettgeri Dmel1]
gi|414097018|gb|EKT58673.1| hypothetical protein OOC_03252 [Providencia rettgeri Dmel1]
Length = 267
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GDP AQ++LG R Q + A + KA +Q + A + LGT+++ G V++
Sbjct: 45 AQKGDPKAQFQLGERYFKGLGVSQDSKAAAEWFIKAGNQGNSDAQFRLGTMFVNGFGVRR 104
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
D A+ + +A+ +G A + +G+ V + L K
Sbjct: 105 DYDKAMLWYEQAAAQGDTRAETNMAMMYAQGLGVTQNLEK 144
>gi|420417419|ref|ZP_14916519.1| cysteine-rich protein X [Helicobacter pylori NQ4044]
gi|393033771|gb|EJB34833.1| cysteine-rich protein X [Helicobacter pylori NQ4044]
Length = 256
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|420406148|ref|ZP_14905321.1| cysteine-rich protein X [Helicobacter pylori CPY6271]
gi|393021967|gb|EJB23097.1| cysteine-rich protein X [Helicobacter pylori CPY6271]
Length = 256
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAK 156
>gi|342904364|ref|ZP_08726165.1| Sel1-like repeat protein [Haemophilus haemolyticus M21621]
gi|341953604|gb|EGT80108.1| Sel1-like repeat protein [Haemophilus haemolyticus M21621]
Length = 254
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G L +AA D DAQ+++G + Q++ +A +++KA +Q + +LG +Y
Sbjct: 119 GFKWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLKKAANQNDTESQMILGDMY 178
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD VK++ A+ + +A+E ++ A G + G+ V +
Sbjct: 179 YDGDGVKENKTEAIKWYQKAAENNNSRAQAIVGVAYMGGIGVKQNF 224
>gi|270295371|ref|ZP_06201572.1| serine/threonine protein kinase [Bacteroides sp. D20]
gi|270274618|gb|EFA20479.1| serine/threonine protein kinase [Bacteroides sp. D20]
Length = 727
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +AQYELG + D ++ +A + +KA +Q + A LG +Y TG V
Sbjct: 463 AAEQGNTEAQYELGRMYFLGRDVAKNATEAEKWYQKAANQGNAKAQNELGNLYYTGLNVT 522
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
++ + A+ + +A+E+G A A G + G + + RV AAK
Sbjct: 523 RNYSEAIKWYQKAAEQGIASAQYKLGYMYDYGQGISQ-------NRVEAAK 566
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 76 ELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVE 135
E A A+ NT A+Y L +++ AAN G+ AQ ELG
Sbjct: 459 ETAKAAEQGNTEAQYELGRMYFLGRDVAKNATEAEKWYQKAANQGNAKAQNELGNLYYTG 518
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
+ ++ +A + +KA +Q A Y LG +Y G + ++ A + +A+E+ +
Sbjct: 519 LNVTRNYSEAIKWYQKAAEQGIASAQYKLGYMYDYGQGISQNRVEAAKWYKKAAEQENVD 578
Query: 196 AAIAYGSLLLRGVQVPECL 214
A G++ V +PE +
Sbjct: 579 AQYRLGNMFFYKVGIPEDI 597
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY+LG Q+ +A + +KA +Q + A Y LG ++ +
Sbjct: 535 AAEQGIASAQYKLGYMYDYGQGISQNRVEAAKWYKKAAEQENVDAQYRLGNMFFYKVGIP 594
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGV--QVPECLT--KLNAKRVSA 224
+DI A+ + +A+E+G A G + G + PE + K+ A+R A
Sbjct: 595 EDIDEAIKWYKKAAEQGDIKAQKKLGEIYSNGARKKDPEAIKWYKMAAERGDA 647
>gi|432453412|ref|ZP_19695650.1| hypothetical protein A13W_04405 [Escherichia coli KTE193]
gi|433032136|ref|ZP_20219924.1| hypothetical protein WIC_00743 [Escherichia coli KTE112]
gi|430974045|gb|ELC90983.1| hypothetical protein A13W_04405 [Escherichia coli KTE193]
gi|431559160|gb|ELI32732.1| hypothetical protein WIC_00743 [Escherichia coli KTE112]
Length = 325
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|420506081|ref|ZP_15004596.1| cysteine-rich protein X [Helicobacter pylori Hp P-74]
gi|393115586|gb|EJC16096.1| cysteine-rich protein X [Helicobacter pylori Hp P-74]
Length = 256
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|152985215|ref|YP_001345848.1| hypothetical protein PSPA7_0453 [Pseudomonas aeruginosa PA7]
gi|150960373|gb|ABR82398.1| hypothetical protein PSPA7_0453 [Pseudomonas aeruginosa PA7]
Length = 329
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G+P A ++ G + +YV + + + KA A L +Y GD
Sbjct: 52 LRQAAETGEPQALFDFGAYFYQQQNYVSARE----WWGKAAGAGMARAQIQLAMLYRDGD 107
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
++D A F +A+E+G AGA G L RG V + K + AA +
Sbjct: 108 GGREDKTEAARWFRKAAEQGDAGAQNEMGVLYWRGEGVDQDRVKAGSWFERAAASGSEDA 167
Query: 233 ESNL 236
E+NL
Sbjct: 168 ETNL 171
>gi|297850220|ref|XP_002892991.1| hypothetical protein ARALYDRAFT_889238 [Arabidopsis lyrata subsp.
lyrata]
gi|297338833|gb|EFH69250.1| hypothetical protein ARALYDRAFT_889238 [Arabidopsis lyrata subsp.
lyrata]
Length = 678
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
Y EKAVD P Y LG +YL G VK+D+ A F A+ G A + G
Sbjct: 342 YFEKAVDNEDPSGHYNLGVLYLKGIGVKRDVRQATKYFFVAANAGQPKAFYQLAKMFHTG 401
Query: 208 V------QVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNL 257
V ++ KL A+R + +R LE+ L V KA + A+ G +
Sbjct: 402 VGLKKNLEMATSFYKLVAERGPWSSLSRWALEAYLKGDVGKALILYSRMAEMGYEV 457
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A G+ +A Y++G ++ D +A ++ KAVD+ P ++ LLG +Y G V+
Sbjct: 237 AQKGNANAMYKIGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVE 296
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++ AL A+++G A G L ++G V
Sbjct: 297 RNYTKALEWLTLAAKEGLYSAFNGIGYLYVKGYGV 331
>gi|171322838|ref|ZP_02911555.1| Sel1 domain protein repeat-containing protein [Burkholderia
ambifaria MEX-5]
gi|171091805|gb|EDT37314.1| Sel1 domain protein repeat-containing protein [Burkholderia
ambifaria MEX-5]
Length = 214
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 38/80 (47%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
ALL +AA GDP A Y LG R QA ++ E A P A ++L Y
Sbjct: 89 ALLGEAAGQGDPAAAYYLGLIYRSGYGIAADPVQAAHWFELASRADIPAADFMLANAYRD 148
Query: 171 GDCVKKDIASALWCFHRASE 190
G V +D A AL + RA+E
Sbjct: 149 GSGVPRDEARALALYRRAAE 168
>gi|409435987|ref|ZP_11263191.1| Peptidoglycan-binding domain 1 protein [Rhizobium mesoamericanum
STM3625]
gi|408752296|emb|CCM74340.1| Peptidoglycan-binding domain 1 protein [Rhizobium mesoamericanum
STM3625]
Length = 1262
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L DAA GDP A +E+G R V D ++A + + A ++ A Y LG VY G
Sbjct: 983 LADAARSGDPLALFEIGARYSEGRAGVAVDAKEAANWYQLAANKGFAPAEYRLGNVYEKG 1042
Query: 172 DCVKKDIASALWCFHRASEKGHAGA----AIAYGS 202
V +DIA A + +A+ +G+A A A+ Y S
Sbjct: 1043 TGVDRDIAKAKHYYEQAANQGNASAMHNLAVLYAS 1077
>gi|147667666|gb|ABQ45799.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|147667658|gb|ABQ45795.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|452880796|ref|ZP_21957708.1| hypothetical protein G039_32487 [Pseudomonas aeruginosa VRFPA01]
gi|452182826|gb|EME09844.1| hypothetical protein G039_32487 [Pseudomonas aeruginosa VRFPA01]
Length = 329
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G+P A ++ G + +YV + + + KA A L +Y GD
Sbjct: 52 LRQAAETGEPQALFDFGAYFYQQQNYVSARE----WWGKAAGAGMARAQIQLAMLYRDGD 107
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
++D A F +A+E+G AGA G L RG V + K + AA +
Sbjct: 108 GGREDKTEAARWFRKAAEQGDAGAQNEMGVLYWRGEGVDQDRVKAGSWFERAAASGSEDA 167
Query: 233 ESNL 236
E+NL
Sbjct: 168 ETNL 171
>gi|420449178|ref|ZP_14948051.1| cysteine-rich protein X [Helicobacter pylori Hp H-44]
gi|393063713|gb|EJB64557.1| cysteine-rich protein X [Helicobacter pylori Hp H-44]
Length = 256
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDYKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVPECLTK 216
A I G + + G VP K
Sbjct: 134 TNAYINLGIMYMEGRGVPSNYAK 156
>gi|420407274|ref|ZP_14906440.1| cysteine-rich protein X [Helicobacter pylori CPY6311]
gi|393022173|gb|EJB23301.1| cysteine-rich protein X [Helicobacter pylori CPY6311]
Length = 244
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 38 ASFYKSAIKNGEPLAYILLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 97
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 98 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 144
>gi|416287190|ref|ZP_11648794.1| hypothetical protein YbeQ [Shigella boydii ATCC 9905]
gi|320178434|gb|EFW53402.1| hypothetical protein YbeQ [Shigella boydii ATCC 9905]
Length = 325
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|452966867|gb|EME71875.1| TPR repeat-containing protein [Magnetospirillum sp. SO-1]
Length = 556
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G+P AQ LG L + D +A + A P A + LG+ Y G V KDI+
Sbjct: 57 GNPAAQARLGHMLFEGLGGAKDDVEALKLLNAAAVAGDPLAQHWLGSAYFNGRAVPKDIS 116
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
AL F RA++KG + A G + G+ +
Sbjct: 117 QALVWFGRAADKGQPESLHAMGEIHFNGLGI 147
>gi|422015298|ref|ZP_16361897.1| hypothetical protein OOA_11118 [Providencia burhodogranariea DSM
19968]
gi|414099463|gb|EKT61104.1| hypothetical protein OOA_11118 [Providencia burhodogranariea DSM
19968]
Length = 262
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 158 PGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKL 217
P A +LLG Y TG V +D A F +A +G+A A G++ + G V K
Sbjct: 45 PKAQFLLGESYFTGKGVSQDFKVAAQWFIKAGNQGNADAQFRLGTMYVNGFAVSRDYDKA 104
Query: 218 NAKRVSAAKKARANLESNL----------MNPVEKAKEQFEVAAQAG 254
+AAK+ E+N+ +EKA F+ AAQ G
Sbjct: 105 ILWYEAAAKQNDTRAETNMATMYAQGLGVTQDIEKAAYWFKKAAQGG 151
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 76 ELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCR---- 131
++ L A N + A++ L + + + A + A N G+ DAQ+ LG
Sbjct: 35 QITLSAQNGDPKAQFLLGESYFTGKGVSQDFKVAAQWFIKAGNQGNADAQFRLGTMYVNG 94
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
V DY +A + E A Q A + T+Y G V +DI A + F +A++
Sbjct: 95 FAVSRDY----DKAILWYEAAAKQNDTRAETNMATMYAQGLGVTQDIEKAAYWFKKAAQG 150
Query: 192 GH 193
G+
Sbjct: 151 GN 152
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A GDP AQ+ LG Q + A + KA +Q + A + LGT+Y+ G V
Sbjct: 39 SAQNGDPKAQFLLGESYFTGKGVSQDFKVAAQWFIKAGNQGNADAQFRLGTMYVNGFAVS 98
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+D A+ + A+++ A ++ +G+ V + + K
Sbjct: 99 RDYDKAILWYEAAAKQNDTRAETNMATMYAQGLGVTQDIEK 139
>gi|417547927|ref|ZP_12199008.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|417564322|ref|ZP_12215196.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|395556078|gb|EJG22079.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|400388226|gb|EJP51298.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
Length = 246
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV--QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA P+AQY +G L +N Y ++ +A + + + +Q + A Y L YL+GD
Sbjct: 89 AAKNNFPEAQYNMG--LMYDNGYYVNKNRSKALEFYKLSANQGYAKAQYNLANAYLSGDG 146
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTKLNAKRVSAAK 226
V+KDI AL + +A+ + + A ++ G V E +L K V A+
Sbjct: 147 VQKDINLALELYEKAAIQNLSEAQYNLANIYSDGNLVKQDNEKALELYIQLAEKGVPEAQ 206
Query: 227 KARANLESNLMNPVEKAKEQFEVAAQAG 254
A + +N+ + EKAK F+ AA G
Sbjct: 207 NNLAYMYANVYSDYEKAKFWFKKAADNG 234
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 93 SKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKA 152
SK L +VP + + + AA G P AQ +L +++++A+Y+ EKA
Sbjct: 31 SKYFLGKNVPQDYQKAFSYFQM-AAEQGLPIAQNDLAGMYSKGIGTSKNEEKAYYWYEKA 89
Query: 153 VDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
P A Y +G +Y G V K+ + AL + ++ +G+A A + L G V
Sbjct: 90 AKNNFPEAQYNMGLMYDNGYYVNKNRSKALEFYKLSANQGYAKAQYNLANAYLSGDGV 147
>gi|420458774|ref|ZP_14957583.1| cysteine-rich protein X [Helicobacter pylori Hp A-26]
gi|393074117|gb|EJB74878.1| cysteine-rich protein X [Helicobacter pylori Hp A-26]
Length = 256
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|342217685|ref|ZP_08710324.1| Sel1 repeat protein [Megasphaera sp. UPII 135-E]
gi|341593348|gb|EGS36198.1| Sel1 repeat protein [Megasphaera sp. UPII 135-E]
Length = 1112
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +AQY+LG VQ D++A + +KA + H A Y LG Y G+ V
Sbjct: 597 AAAQGNAEAQYQLGVCYEEGKGVVQDDEKAGEWYQKAAVKGHIAAQYQLGVCYEKGNGVA 656
Query: 176 KDIASALWCFHRASEKGHAGA 196
+D A A+ + +A+ +G+ A
Sbjct: 657 QDDAKAVEWYQKAATQGNVDA 677
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Query: 49 EVDRVIDYCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAM 108
EV + C + + K A E ++ A A N A+Y L + K A
Sbjct: 432 EVQYYLGVCYRTGKGVAQNYKKAVEWYQKA--ATQGNVDAQYQLGWCYEKGKGVAQDYAK 489
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
AA G+ DAQY LG V VQ D +A + +KA Q + A Y LG Y
Sbjct: 490 AVEWYQKAAIQGNVDAQYHLGVFYEV---VVQDDTKAVDWYQKAATQGNVDAQYQLGWCY 546
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGA 196
G + +D A A+ + +A+ +G+ A
Sbjct: 547 EYGTGIVQDDAKAVEWYQKAATQGNVDA 574
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A G+ + QY LG R Q+ ++A + +KA Q + A Y LG Y G V +
Sbjct: 426 ATQGNAEVQYYLGVCYRTGKGVAQNYKKAVEWYQKAATQGNVDAQYQLGWCYEKGKGVAQ 485
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ 209
D A A+ + +A+ +G+ A G VQ
Sbjct: 486 DYAKAVEWYQKAAIQGNVDAQYHLGVFYEVVVQ 518
>gi|334131555|ref|ZP_08505317.1| hypothetical protein METUNv1_02379 [Methyloversatilis universalis
FAM5]
gi|333443028|gb|EGK70993.1| hypothetical protein METUNv1_02379 [Methyloversatilis universalis
FAM5]
Length = 286
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A+ GDP+AQY G L D ++ ++E+A +Q H A Y L Y G
Sbjct: 99 AHTGDPEAQYSYGMMLSQGGSGKAEDLAESIRWLERAAEQGHVRAQYELALAYKLGRGTL 158
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNA 219
+D +A F A+ GH GA G L G VP L + A
Sbjct: 159 QDYPAAGRWFMAAARNGHVGAQYHMGRLHRIGEGVPADLIRAYA 202
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L AA G AQYEL ++ +Q A + A H GA Y +G ++ G+
Sbjct: 132 LERAAEQGHVRAQYELALAYKLGRGTLQDYPAAGRWFMAAARNGHVGAQYHMGRLHRIGE 191
Query: 173 CVKKDIASALWCFHRASEKGHAGA 196
V D+ A F+RA+ +GH A
Sbjct: 192 GVPADLIRAYAWFNRAAAQGHGAA 215
>gi|313892086|ref|ZP_07825682.1| Sel1 repeat protein [Dialister microaerophilus UPII 345-E]
gi|313119478|gb|EFR42674.1| Sel1 repeat protein [Dialister microaerophilus UPII 345-E]
Length = 409
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G PDA Y+ L+ ++ Q+A + +KA + A Y LG +Y TG+ +
Sbjct: 280 AATLGHPDAMYKTAECLQSGQGCEKNIQEAINWYKKAYENHVSAAAYSLGMIYYTGEEIM 339
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+++ +A+ F +++E+G+ A G RG V
Sbjct: 340 ENMETAIKWFMKSAEQGYVPAMYYLGLCFARGAGV 374
>gi|208435013|ref|YP_002266679.1| cysteine-rich protein X [Helicobacter pylori G27]
gi|208432942|gb|ACI27813.1| cysteine-rich protein X [Helicobacter pylori G27]
Length = 256
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYILLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|147667670|gb|ABQ45801.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|398910009|ref|ZP_10654822.1| Sel1 repeat protein [Pseudomonas sp. GM49]
gi|398186841|gb|EJM74201.1| Sel1 repeat protein [Pseudomonas sp. GM49]
Length = 184
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%)
Query: 136 NDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAG 195
N Q +QA +KA D+ A Y LG Y G +D+ AL F +AS +GHA
Sbjct: 41 NTQPQDLEQALAACQKASDEGDAQAQYELGEFYYEGKNAPRDLNQALSYFEKASLQGHAQ 100
Query: 196 AAIAYGSLLLRGVQVP 211
A G++ G VP
Sbjct: 101 AQFKLGTMFFHGEGVP 116
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A++ GD AQYELG E D QA Y EKA Q H A + LGT++ G+ V
Sbjct: 57 ASDEGDAQAQYELG-EFYYEGKNAPRDLNQALSYFEKASLQGHAQAQFKLGTMFFHGEGV 115
Query: 175 KKDIASALWCFHRASEKG 192
+ A A+ G
Sbjct: 116 PANNVQAYILLKMAAVNG 133
>gi|420447597|ref|ZP_14946487.1| cysteine-rich protein X [Helicobacter pylori Hp H-43]
gi|393062516|gb|EJB63367.1| cysteine-rich protein X [Helicobacter pylori Hp H-43]
Length = 256
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|147667652|gb|ABQ45792.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|217034663|ref|ZP_03440068.1| hypothetical protein HP9810_901g10 [Helicobacter pylori 98-10]
gi|147667644|gb|ABQ45788.1| hypothetical protein hp1117 [Helicobacter pylori]
gi|216942871|gb|EEC22362.1| hypothetical protein HP9810_901g10 [Helicobacter pylori 98-10]
Length = 256
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|420412478|ref|ZP_14911606.1| cysteine-rich protein X [Helicobacter pylori NQ4228]
gi|393026756|gb|EJB27852.1| cysteine-rich protein X [Helicobacter pylori NQ4228]
Length = 256
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|323452267|gb|EGB08141.1| hypothetical protein AURANDRAFT_10680, partial [Aureococcus
anophagefferens]
Length = 422
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 34/201 (16%)
Query: 88 ARYWLSKLHLKYHVPGACKAM-------GAALLVD----------AANMGDPDAQYELGC 130
ARYW ++ K H A +A+ G + +D AA+ G+ AQ LG
Sbjct: 96 ARYWFARAAAKGH-EAAIEALAELDARGGLGVKLDKKKAERLFRMAADRGEATAQNNLGS 154
Query: 131 RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASE 190
L E + ++AF Y A DQ + A LG Y+ G + D+ A + F RA+
Sbjct: 155 LLYSE----EKHEEAFRYFALAADQGYTYAENSLGCCYMDGAGTEVDLGKARYWFERAAA 210
Query: 191 KG--HAGAAIAY-----GSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKA 243
KG HA A +A GS + + E L ++ A R SAA + R + ++A
Sbjct: 211 KGNEHAIANLARLDERAGSGVKLDKKKAERLFRMAADRGSAAGQNRLGFLLDAEKKFDEA 270
Query: 244 KEQFEVAAQAG-----CNLGL 259
+ +AA G NLGL
Sbjct: 271 FRYYALAADQGYTPGEFNLGL 291
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G Q LG L E + +AF Y A DQ + + LG Y G+ +
Sbjct: 245 AADRGSAAGQNRLGFLLDAEKKF----DEAFRYYALAADQGYTPGEFNLGLCYSRGEGTE 300
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV--SAAKKARANLE 233
D+ A + F RA+ KGH A L RG L K A+R+ +AA + A +
Sbjct: 301 VDLGKAKYWFERAAAKGHEDAIHNLAHLDARG------LDKKKAERLYRTAADRGEAFAQ 354
Query: 234 SNLM------NPVEKAKEQFEVAAQAGCNLG 258
NL E+A + +AA G +G
Sbjct: 355 INLGILLVSEERFEEAFRYYALAADQGLTVG 385
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
A GD +Q L L + ++ ++AF Y A DQ + LG Y G+ +
Sbjct: 35 GAARGDAFSQSSLAFLLDSQEEF----EEAFRYYALAADQGYACGETCLGCCYRRGEGTE 90
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV--SAAKKARANLE 233
D+ A + F RA+ KGH A A L RG + L K A+R+ AA + A +
Sbjct: 91 VDLGKARYWFARAAAKGHEAAIEALAELDARG-GLGVKLDKKKAERLFRMAADRGEATAQ 149
Query: 234 SN---LMNPVEKAKEQFEVAAQA 253
+N L+ EK +E F A A
Sbjct: 150 NNLGSLLYSEEKHEEAFRYFALA 172
>gi|255263414|ref|ZP_05342756.1| Sel1 domain protein repeat-containing protein [Thalassiobium sp.
R2A62]
gi|255105749|gb|EET48423.1| Sel1 domain protein repeat-containing protein [Thalassiobium sp.
R2A62]
Length = 204
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLL 164
C+ G+ L+ A GD AQ+ L RL + + +A + A Q HP A YLL
Sbjct: 25 CEDAGSYLVQRYAQAGDAQAQFNLSQRLDQPHCSLAEQAKALELLHHAAFQNHPDASYLL 84
Query: 165 GTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLL 205
G Y+ G V +D A L A+E GH A + + L
Sbjct: 85 GVRYIVGLGVSEDPALGLSYLVNAAEAGHLNAQFQFAMIRL 125
>gi|254779668|ref|YP_003057774.1| hypothetical protein HELPY_1088 [Helicobacter pylori B38]
gi|254001580|emb|CAX29624.1| Cysteine-rich protein X [Helicobacter pylori B38]
Length = 256
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|147667664|gb|ABQ45798.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|420492270|ref|ZP_14990844.1| cysteine-rich protein X [Helicobacter pylori Hp P-15]
gi|420495535|ref|ZP_14994099.1| cysteine-rich protein X [Helicobacter pylori Hp P-23]
gi|420526294|ref|ZP_15024695.1| tetratricopeptide repeat family protein [Helicobacter pylori Hp
P-15b]
gi|393106709|gb|EJC07252.1| cysteine-rich protein X [Helicobacter pylori Hp P-15]
gi|393111846|gb|EJC12367.1| cysteine-rich protein X [Helicobacter pylori Hp P-23]
gi|393131599|gb|EJC32022.1| tetratricopeptide repeat family protein [Helicobacter pylori Hp
P-15b]
Length = 256
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|383749265|ref|YP_005424368.1| hypothetical protein HPELS_01075 [Helicobacter pylori ELS37]
gi|380874011|gb|AFF19792.1| Cysteine-rich protein X [Helicobacter pylori ELS37]
Length = 256
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|254451995|ref|ZP_05065432.1| Sel1 domain protein repeat-containing protein [Octadecabacter
arcticus 238]
gi|198266401|gb|EDY90671.1| Sel1 domain protein repeat-containing protein [Octadecabacter
arcticus 238]
Length = 455
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ +AQ LG N +Q +A + A +Q A LG +Y G+ V
Sbjct: 279 AAEQGEANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVV 338
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A + A+E+GHA A G + G V + ++ AA++ AN ++N
Sbjct: 339 QDYAEAAKWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTN 398
Query: 236 LMN 238
L N
Sbjct: 399 LGN 401
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G +AQ LG N +Q +A + A +Q A LG +Y G+ V
Sbjct: 135 AAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVV 194
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A + A+E+GHA A G + G V + ++ AA++ AN ++N
Sbjct: 195 QDYAEAAKWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTN 254
Query: 236 LMN 238
L N
Sbjct: 255 LGN 257
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GD DAQY G + D++A + A +Q H A LG +Y G+ V +
Sbjct: 28 AEQGDVDAQYNFGRLFDNGEGVLLDDEEAVRWFRLAAEQGHARAQNTLGVMYDYGEGVIQ 87
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ-VPECLTKLNAKRVSAAKKARANLESN 235
D A A+ + A+E+G A A G G V + N R+ AA++ AN ++N
Sbjct: 88 DDAKAIRWYRLAAEQGDARAQSNLGGSYNNGNGVVQDYAVAANWYRL-AAEQGHANAQTN 146
Query: 236 L 236
L
Sbjct: 147 L 147
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQ LG +Q D +A + A +Q A LG Y G+ V
Sbjct: 63 AAEQGHARAQNTLGVMYDYGEGVIQDDAKAIRWYRLAAEQGDARAQSNLGGSYNNGNGVV 122
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
+D A A + A+E+GHA A G + G V + ++ AA++ AN ++N
Sbjct: 123 QDYAVAANWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTN 182
Query: 236 LMN 238
L N
Sbjct: 183 LGN 185
>gi|183600450|ref|ZP_02961943.1| hypothetical protein PROSTU_04026 [Providencia stuartii ATCC 25827]
gi|188019934|gb|EDU57974.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
Length = 493
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 AANMGDPDAQ------YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AANMG AQ Y G RL +N Y QA Y+ ++A Q + AL+++G Y
Sbjct: 232 AANMGSAIAQMNMGDLYYEGHRLIEKNPY-----QAMYWYKRAASQGYTDALFVMGRGYE 286
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
GD V KD+ SA + + G AA+ +G+
Sbjct: 287 EGDGVGKDLGSAFEWYLLGANNGSVPAAMKVAEFYEKGL 325
>gi|261855083|ref|YP_003262366.1| Sel1 domain-containing protein repeat-containing protein
[Halothiobacillus neapolitanus c2]
gi|261835552|gb|ACX95319.1| Sel1 domain protein repeat-containing protein [Halothiobacillus
neapolitanus c2]
Length = 255
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQ-LHPGALYLLGTVYLTGDCVK 175
A GD AQY LG V + + + ++A DQ PG L LGT+Y G+ VK
Sbjct: 58 AERGDIFAQYVLGHMYCVGQGVPKDMVKGLSWYQRAADQGFAPGQL-ALGTMYYNGEGVK 116
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLT 215
+D A F A+E+G+ A ++ + G VP+ T
Sbjct: 117 QDYTVAAKWFRLAAERGYDRAQSNLAAMYMNGTGVPQDYT 156
>gi|170703344|ref|ZP_02894131.1| Sel1 domain protein repeat-containing protein [Burkholderia
ambifaria IOP40-10]
gi|170131740|gb|EDT00281.1| Sel1 domain protein repeat-containing protein [Burkholderia
ambifaria IOP40-10]
Length = 214
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 38/80 (47%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
ALL +AA GDP A Y LG R QA ++ E A P A ++L Y
Sbjct: 89 ALLGEAAGQGDPAAAYYLGLIYRSGYGTAADPVQAAHWFELASRADIPAADFMLANAYRD 148
Query: 171 GDCVKKDIASALWCFHRASE 190
G V +D A AL + RA+E
Sbjct: 149 GSGVPRDEARALALYRRAAE 168
>gi|425431857|ref|ZP_18812438.1| Sel1 repeat protein [Helicobacter pylori GAM100Ai]
gi|410715572|gb|EKQ72986.1| Sel1 repeat protein [Helicobacter pylori GAM100Ai]
Length = 267
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 89 VPKDY----KKAVEYFQKAVDNDMPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY 144
Query: 194 AGAAIAYGSLLLRGVQVP-------ECLTK 216
A I G + + G VP EC K
Sbjct: 145 TNAYINLGIMYMEGRGVPSNYAKATECFRK 174
>gi|291281595|ref|YP_003498413.1| FOG: TPR repeat, SEL1 subfamily [Escherichia coli O55:H7 str.
CB9615]
gi|387505706|ref|YP_006157962.1| TPR repeat, SEL1 subfamily protein [Escherichia coli O55:H7 str.
RM12579]
gi|416824870|ref|ZP_11896239.1| TPR repeat, SEL1 subfamily protein [Escherichia coli O55:H7 str.
USDA 5905]
gi|419113553|ref|ZP_13658587.1| sel1 repeat family protein [Escherichia coli DEC5A]
gi|419124808|ref|ZP_13669709.1| sel1 repeat family protein [Escherichia coli DEC5C]
gi|419130384|ref|ZP_13675235.1| sel1 repeat family protein [Escherichia coli DEC5D]
gi|419135121|ref|ZP_13679928.1| sel1 repeat family protein [Escherichia coli DEC5E]
gi|425247173|ref|ZP_18640392.1| TPR repeat, SEL1 subfamily protein [Escherichia coli 5905]
gi|290761468|gb|ADD55429.1| FOG: TPR repeat, SEL1 subfamily [Escherichia coli O55:H7 str.
CB9615]
gi|320660101|gb|EFX27631.1| TPR repeat, SEL1 subfamily protein [Escherichia coli O55:H7 str.
USDA 5905]
gi|374357700|gb|AEZ39407.1| TPR repeat, SEL1 subfamily protein [Escherichia coli O55:H7 str.
RM12579]
gi|377965521|gb|EHV28940.1| sel1 repeat family protein [Escherichia coli DEC5A]
gi|377980336|gb|EHV43601.1| sel1 repeat family protein [Escherichia coli DEC5C]
gi|377980544|gb|EHV43808.1| sel1 repeat family protein [Escherichia coli DEC5D]
gi|377987431|gb|EHV50617.1| sel1 repeat family protein [Escherichia coli DEC5E]
gi|408174496|gb|EKI01480.1| TPR repeat, SEL1 subfamily protein [Escherichia coli 5905]
Length = 325
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|387782687|ref|YP_005793400.1| cysteine-rich protein X [Helicobacter pylori 51]
gi|261838446|gb|ACX98212.1| cysteine-rich protein X [Helicobacter pylori 51]
Length = 256
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|147667650|gb|ABQ45791.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
>gi|420414050|ref|ZP_14913171.1| cysteine-rich protein X [Helicobacter pylori NQ4099]
gi|393027001|gb|EJB28094.1| cysteine-rich protein X [Helicobacter pylori NQ4099]
Length = 256
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|420435531|ref|ZP_14934530.1| cysteine-rich protein X [Helicobacter pylori Hp H-27]
gi|421715311|ref|ZP_16154628.1| sel1 repeat family protein [Helicobacter pylori R036d]
gi|393051390|gb|EJB52341.1| cysteine-rich protein X [Helicobacter pylori Hp H-27]
gi|407215067|gb|EKE84907.1| sel1 repeat family protein [Helicobacter pylori R036d]
Length = 256
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|253774369|ref|YP_003037200.1| Sel1 domain protein repeat-containing protein, partial [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|297517802|ref|ZP_06936188.1| Sel1 domain protein repeat-containing protein [Escherichia coli
OP50]
gi|387823310|ref|YP_006094179.1| hypothetical protein B21_00602, partial [Escherichia coli
BL21(DE3)]
gi|422785252|ref|ZP_16837991.1| Sel1 [Escherichia coli H489]
gi|253325413|gb|ACT30015.1| Sel1 domain protein repeat-containing protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|313848571|emb|CAQ31119.2| conserved protein, partial [Escherichia coli BL21(DE3)]
gi|323963214|gb|EGB58782.1| Sel1 [Escherichia coli H489]
Length = 170
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEQGDSEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y +D A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGRKYSEDKSRHRDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|268592892|ref|ZP_06127113.1| TPR repeat protein, protein-protein interaction [Providencia
rettgeri DSM 1131]
gi|291311682|gb|EFE52135.1| TPR repeat protein, protein-protein interaction [Providencia
rettgeri DSM 1131]
Length = 267
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A GDP AQ++LG R Q + A + KA +Q + A + LGT+++ G V++
Sbjct: 45 AQKGDPKAQFQLGERYFKGLGVSQDSKAAAEWFIKAGNQGNSDAQFRLGTMFVNGFGVRR 104
Query: 177 DIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
D A+ + +A+ +G A + +G+ V + L K
Sbjct: 105 DYDKAMLWYEQAAAQGDTRAETNMAMMYAQGLGVSQNLEK 144
>gi|217032696|ref|ZP_03438182.1| hypothetical protein HPB128_202g30 [Helicobacter pylori B128]
gi|298735881|ref|YP_003728406.1| hypothetical protein HPB8_385 [Helicobacter pylori B8]
gi|216945626|gb|EEC24277.1| hypothetical protein HPB128_202g30 [Helicobacter pylori B128]
gi|298355070|emb|CBI65942.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 256
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|147667690|gb|ABQ45811.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|410634930|ref|ZP_11345555.1| hypothetical protein GLIP_0105 [Glaciecola lipolytica E3]
gi|410145504|dbj|GAC12760.1| hypothetical protein GLIP_0105 [Glaciecola lipolytica E3]
Length = 773
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
QS QA Y+ +KA Q + GA+ LG ++ GD VK+ + A + +AS+ G A AA
Sbjct: 598 QSYAQAVYWYQKAAAQGNSGAMNNLGLLHSRGDGVKQSYSEAAKWYRKASDLGDAIAANN 657
Query: 200 YGSLLLRGVQVPECLTKLN 218
GSL G VP+ + N
Sbjct: 658 LGSLYRDGEGVPQSHAEAN 676
>gi|420460596|ref|ZP_14959394.1| cysteine-rich protein X [Helicobacter pylori Hp A-27]
gi|393076553|gb|EJB77305.1| cysteine-rich protein X [Helicobacter pylori Hp A-27]
Length = 256
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|147667648|gb|ABQ45790.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|147667672|gb|ABQ45802.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|325180716|emb|CCA15122.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 337
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 103 GACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGA 160
G K +GAAL AA++GDP A LG + D + ++A Y E+A Q A
Sbjct: 184 GTPKDIGAALHWYHKAADIGDPVAMSHLGDIYSMGMDAKKDIKKAIAYYEEAAKQNDISA 243
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ-VPECL 214
Y + ++G + + A FHRA+ +GH A + L +G VP+ L
Sbjct: 244 QYNYAVLLISGTDIPTNYRLAEALFHRAATQGHVPAMVNLAQLYSQGCGLVPKSL 298
>gi|393779651|ref|ZP_10367888.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392609846|gb|EIW92644.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 811
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + +A+Y L++ + G L A+ G+P+AQ EL R Q
Sbjct: 66 AETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVEQ 125
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
S ++ + IEK ++ +P L Y +G+ V KD+ A + +AS+ G++ A +
Sbjct: 126 SKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEMLL 185
Query: 201 GSLLLR-GVQVPEC---LTKLNAKRVSAAKK--ARANLESNLMNPVE-KAKEQFEVAAQA 253
S PE LT++ K + A++ A A LE + E KA E E AA+
Sbjct: 186 ASWTYEVNASNPEAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKG 245
Query: 254 G 254
G
Sbjct: 246 G 246
>gi|420702473|ref|ZP_15184115.1| sel1 repeat family protein, partial [Yersinia pestis PY-54]
gi|391579906|gb|EIS25967.1| sel1 repeat family protein, partial [Yersinia pestis PY-54]
Length = 144
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
YELG DY + ++EK+ D + AL+LL +Y GD VK+D
Sbjct: 1 YELGKYHYTCQDY----DRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYL 56
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL--------- 236
+A++ G + A + G L L G V + L + + AA++ + NL
Sbjct: 57 LKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDG 116
Query: 237 -MNPVEKAKEQFEVAAQAG 254
++KAK F VAA++G
Sbjct: 117 TEKNLDKAKFHFTVAAKSG 135
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 57 CELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDA 116
C+ DR L L K+A D+ N A + L++++ + + + L+ A
Sbjct: 10 CQDYDRGLKWLEKSA----------DHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKA 59
Query: 117 ANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKK 176
A +G DAQ E+G V ++ +A+ + KA +Q + A Y LG +Y GD +K
Sbjct: 60 AQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDGTEK 119
Query: 177 DIASALWCFHRASEKG 192
++ A + F A++ G
Sbjct: 120 NLDKAKFHFTVAAKSG 135
>gi|237746045|ref|ZP_04576525.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377396|gb|EEO27487.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 408
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 126 YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCF 185
Y LG ++ ++A +++ KA DQ P A LLG Y G+ + KD A++ +
Sbjct: 238 YNLGRAYFYGRGTEKNPEEAVFWLRKAADQEQPSAQELLGLAYERGEGIGKDPDKAVYWY 297
Query: 186 HRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
+AS G A G L + PE K + AA++ AN ++ L
Sbjct: 298 EKASLNGSVAAQTKLGLTYLTDNRSPENDQKGISWLKKAARQGEANAQATL 348
>gi|374575165|ref|ZP_09648261.1| TPR repeat-containing protein [Bradyrhizobium sp. WSM471]
gi|374423486|gb|EHR03019.1| TPR repeat-containing protein [Bradyrhizobium sp. WSM471]
Length = 340
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 116 AANMGDPDAQYELGCRL----RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G AQY +GC E DYV++ AF+Y A LH A+ L + G
Sbjct: 136 AAERGHTQAQYNVGCLYLDGRGTEQDYVKA---AFWY-RAAARALHLDAVNNLAVLIQNG 191
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAK--RVSAAKKAR 229
V D+ A FH A+E+GH GA G G V + +K +A+ R++AA+ R
Sbjct: 192 QGVGPDLVKAAALFHSAAEQGHPGAQYNLGLCYAHGRGVEQDFSK-SARWYRLAAAQGKR 250
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 102 PGACKAMGAALLVDAANMGDPDAQYELG-CRLR---VENDYVQSDQQAFYYIEKAVDQLH 157
P KA AAL AA G P AQY LG C VE D+ +S + + A Q
Sbjct: 196 PDLVKA--AALFHSAAEQGHPGAQYNLGLCYAHGRGVEQDFSKSAR----WYRLAAAQGK 249
Query: 158 PGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL-TK 216
A + L +G V++D A+A + GH A A G + LRG P+ L
Sbjct: 250 RDAQFNLAHQLYSGQGVQRDAAAAFALLEPLARDGHNLAQNALGVMYLRGDGAPQDLHLA 309
Query: 217 LNAKRVSAA 225
L R+SAA
Sbjct: 310 LRLFRLSAA 318
>gi|365886108|ref|ZP_09425074.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365338420|emb|CCD97605.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 1163
Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 100 HVPGACK---AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQL 156
VP + K A+G L +AA GDP A YE+G RL + ++A + ++A
Sbjct: 921 QVPASEKLPDAIGGPALRNAALKGDPTAAYEVGVRLAEGKGVAPNYEEAAKWYDRAAQAG 980
Query: 157 HPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
A++ LGT Y G VKKD A + A+E+G+A A
Sbjct: 981 LIPAVFRLGTFYEKGLGVKKDADIARRYYVVAAERGNAKA 1020
>gi|422804620|ref|ZP_16853052.1| Sel1 [Escherichia fergusonii B253]
gi|324114768|gb|EGC08736.1| Sel1 [Escherichia fergusonii B253]
Length = 184
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 102 PGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGA 160
PG+ AA + A + G +QY LG +D D QA Y+ E++ +Q +P A
Sbjct: 44 PGSLPFTTAATELSAIH-GHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQKNPRA 102
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
LG +YL G VK D A+ + A+E+GH A G + G +
Sbjct: 103 QSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGHVHAQYTLGLIYRNGTGI 152
>gi|323457143|gb|EGB13009.1| hypothetical protein AURANDRAFT_18516 [Aureococcus anophagefferens]
Length = 334
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ G AQ+ L L E + ++AF Y A DQ + LG Y G+ +
Sbjct: 246 AADRGHALAQHNLAVLLDAEEKF----EEAFRYYALAADQGYTDGETNLGCCYRDGEGTE 301
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
D+ A + F RA+ KGH GA A +L RG+
Sbjct: 302 VDLGKARYWFERAAAKGHEGAIKALAALDARGL 334
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG L E ++AF Y A DQ A LG Y G+ +
Sbjct: 41 AAGRGDAVAQNNLGHLLSEERP-----EEAFRYYALAADQGFTCAENSLGCCYGNGEGTE 95
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV-----SAAKKARA 230
D+ A + F RA+ KGH A SL L + KL+ K+ +AA + A
Sbjct: 96 VDLGKARYWFERAAAKGHEKAIR---SLALLDASIDGEGVKLDKKKAMKLYRAAADRGDA 152
Query: 231 NLESNLMNPVEKAKEQFEVA 250
++NL ++ K +FE A
Sbjct: 153 VAQANLAFLLDSEK-RFEEA 171
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD AQ L L E + ++AF Y + DQ + A + LG Y+ G+ +
Sbjct: 146 AADRGDAVAQANLAFLLDSEKRF----EEAFRYYALSADQGYTDAEHNLGVCYMEGEGTE 201
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRV--SAAKKARANLE 233
K A+ +W RA E G A A + G G V L K A+R+ +AA + A +
Sbjct: 202 K--AAKIW--KRAVELGDAEAMESLGEAYEYGEGVK--LDKKKAERLYRAAADRGHALAQ 255
Query: 234 SNLMNPVEKAKEQFEVA 250
NL ++ A+E+FE A
Sbjct: 256 HNLAVLLD-AEEKFEEA 271
>gi|183179598|ref|ZP_02957809.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|183013009|gb|EDT88309.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 350
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A +P AQY+L + + Q+ +AFY+ ++ + HP A+ + YLTG
Sbjct: 37 LTQLAQEQNPQAQYQLALAYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQ 96
Query: 173 CVKKDIASALWCFHRASEKGH--AGAAIA 199
V+KD A + + + GH AG +A
Sbjct: 97 GVEKDPLQAQYWLIKLALAGHPQAGTTLA 125
>gi|147667660|gb|ABQ45796.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|417637968|ref|ZP_12288138.1| hypothetical protein ECTX1999_0671 [Escherichia coli TX1999]
gi|419168624|ref|ZP_13713021.1| sel1 repeat family protein [Escherichia coli DEC7A]
gi|419179618|ref|ZP_13723243.1| sel1 repeat family protein [Escherichia coli DEC7C]
gi|419185180|ref|ZP_13728702.1| sel1 repeat family protein [Escherichia coli DEC7D]
gi|419190426|ref|ZP_13733894.1| sel1 repeat family protein [Escherichia coli DEC7E]
gi|420384273|ref|ZP_14883659.1| sel1 repeat family protein [Escherichia coli EPECa12]
gi|345395261|gb|EGX25010.1| hypothetical protein ECTX1999_0671 [Escherichia coli TX1999]
gi|378018489|gb|EHV81346.1| sel1 repeat family protein [Escherichia coli DEC7A]
gi|378028079|gb|EHV90704.1| sel1 repeat family protein [Escherichia coli DEC7C]
gi|378032598|gb|EHV95179.1| sel1 repeat family protein [Escherichia coli DEC7D]
gi|378042529|gb|EHW04978.1| sel1 repeat family protein [Escherichia coli DEC7E]
gi|391309109|gb|EIQ66786.1| sel1 repeat family protein [Escherichia coli EPECa12]
Length = 327
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 69
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 70 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 113
>gi|384894647|ref|YP_005768696.1| cysteine-rich protein X [Helicobacter pylori Sat464]
gi|308063901|gb|ADO05788.1| cysteine-rich protein X [Helicobacter pylori Sat464]
Length = 256
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|147667676|gb|ABQ45804.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|146343496|ref|YP_001208544.1| hypothetical protein BRADO6728 [Bradyrhizobium sp. ORS 278]
gi|146196302|emb|CAL80329.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
Length = 1161
Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 100 HVPGACK---AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQL 156
VP + K A+G L +AA GDP A YE+G RL + ++A + ++A
Sbjct: 919 QVPASEKLPDAIGGPALRNAALKGDPTAAYEVGIRLAEGKGVAPNYEEAAKWYDRAAQAG 978
Query: 157 HPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
A++ LGT Y G VKKD A + A+E+G+A A
Sbjct: 979 LIPAVFRLGTFYEKGLGVKKDADIARRYYVVAAERGNAKA 1018
>gi|432375765|ref|ZP_19618777.1| hypothetical protein WCQ_00636 [Escherichia coli KTE12]
gi|430901138|gb|ELC23121.1| hypothetical protein WCQ_00636 [Escherichia coli KTE12]
Length = 195
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ + +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLSAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G L RG
Sbjct: 68 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRG 111
>gi|420450077|ref|ZP_14948942.1| cysteine-rich protein X [Helicobacter pylori Hp H-45]
gi|393068273|gb|EJB69076.1| cysteine-rich protein X [Helicobacter pylori Hp H-45]
Length = 256
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|417152875|ref|ZP_11991666.1| Sel1 repeat protein [Escherichia coli 96.0497]
gi|417579917|ref|ZP_12230736.1| hypothetical protein ECSTECB2F1_0559 [Escherichia coli STEC_B2F1]
gi|417665768|ref|ZP_12315333.1| hypothetical protein ECSTECO31_0566 [Escherichia coli STEC_O31]
gi|422777324|ref|ZP_16830977.1| Sel1 [Escherichia coli H120]
gi|432804733|ref|ZP_20038678.1| hypothetical protein A1WA_00627 [Escherichia coli KTE91]
gi|432932989|ref|ZP_20132843.1| hypothetical protein A13E_01981 [Escherichia coli KTE184]
gi|433129011|ref|ZP_20314484.1| hypothetical protein WKG_00746 [Escherichia coli KTE163]
gi|433133827|ref|ZP_20319205.1| hypothetical protein WKI_00760 [Escherichia coli KTE166]
gi|433192601|ref|ZP_20376618.1| hypothetical protein WGU_00910 [Escherichia coli KTE90]
gi|323945119|gb|EGB41181.1| Sel1 [Escherichia coli H120]
gi|345343546|gb|EGW75932.1| hypothetical protein ECSTECB2F1_0559 [Escherichia coli STEC_B2F1]
gi|386169599|gb|EIH36107.1| Sel1 repeat protein [Escherichia coli 96.0497]
gi|397786692|gb|EJK97525.1| hypothetical protein ECSTECO31_0566 [Escherichia coli STEC_O31]
gi|431357196|gb|ELG43869.1| hypothetical protein A1WA_00627 [Escherichia coli KTE91]
gi|431457022|gb|ELH37365.1| hypothetical protein A13E_01981 [Escherichia coli KTE184]
gi|431651361|gb|ELJ18622.1| hypothetical protein WKG_00746 [Escherichia coli KTE163]
gi|431662421|gb|ELJ29196.1| hypothetical protein WKI_00760 [Escherichia coli KTE166]
gi|431720855|gb|ELJ84874.1| hypothetical protein WGU_00910 [Escherichia coli KTE90]
Length = 325
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|293418755|ref|ZP_06661190.1| ybeQ protein [Escherichia coli B088]
gi|300817836|ref|ZP_07098050.1| Sel1 repeat protein [Escherichia coli MS 107-1]
gi|300907822|ref|ZP_07125438.1| Sel1 repeat protein [Escherichia coli MS 84-1]
gi|301302126|ref|ZP_07208259.1| Sel1 repeat protein [Escherichia coli MS 124-1]
gi|415864168|ref|ZP_11537291.1| Sel1 repeat protein [Escherichia coli MS 85-1]
gi|415876291|ref|ZP_11542759.1| putative TPR repeat protein [Escherichia coli MS 79-10]
gi|291325283|gb|EFE64698.1| ybeQ protein [Escherichia coli B088]
gi|300400454|gb|EFJ83992.1| Sel1 repeat protein [Escherichia coli MS 84-1]
gi|300529533|gb|EFK50595.1| Sel1 repeat protein [Escherichia coli MS 107-1]
gi|300842678|gb|EFK70438.1| Sel1 repeat protein [Escherichia coli MS 124-1]
gi|315255050|gb|EFU35018.1| Sel1 repeat protein [Escherichia coli MS 85-1]
gi|342928778|gb|EGU97500.1| putative TPR repeat protein [Escherichia coli MS 79-10]
Length = 327
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 69
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 70 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 113
>gi|432673620|ref|ZP_19909115.1| hypothetical protein A1YU_00172 [Escherichia coli KTE142]
gi|431217952|gb|ELF15438.1| hypothetical protein A1YU_00172 [Escherichia coli KTE142]
Length = 327
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 69
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 70 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 113
>gi|420445832|ref|ZP_14944737.1| cysteine-rich protein X [Helicobacter pylori Hp H-42]
gi|393060711|gb|EJB61581.1| cysteine-rich protein X [Helicobacter pylori Hp H-42]
Length = 256
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDYKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVP-------ECLTK 216
A I G + + G VP EC K
Sbjct: 134 TNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|420425579|ref|ZP_14924639.1| cysteine-rich protein X [Helicobacter pylori Hp A-5]
gi|393040477|gb|EJB41495.1| cysteine-rich protein X [Helicobacter pylori Hp A-5]
Length = 256
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDMPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVP-------ECLTK 216
A I G + + G VP EC K
Sbjct: 134 TNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|386750078|ref|YP_006223285.1| cysteine-rich protein X [Helicobacter cetorum MIT 00-7128]
gi|384556321|gb|AFI04655.1| cysteine-rich protein X [Helicobacter cetorum MIT 00-7128]
Length = 257
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%)
Query: 121 DPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIAS 180
+P A LG + V+SD +A Y +KAV+ P LG +Y G V KD
Sbjct: 61 EPLAYVLLGIMYKNGRGVVKSDAKAVEYFKKAVENDVPRGYNNLGVMYKEGRGVPKDEQK 120
Query: 181 ALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
A+ F A+EKG+ A I G + + G+ V
Sbjct: 121 AVELFRTAAEKGYTNAYINLGIMYMDGMGV 150
>gi|345322950|ref|XP_001505693.2| PREDICTED: protein sel-1 homolog 1, partial [Ornithorhynchus
anatinus]
Length = 415
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 28 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 87
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ AL F +A+E+G + GS+ G+ V
Sbjct: 88 PVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 123
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQY 126
K A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q
Sbjct: 19 KRAFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQS 75
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
LG + A Y +KA +Q LG++Y G VK+D AL F+
Sbjct: 76 GLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFN 135
Query: 187 RASEKGH 193
AS+ GH
Sbjct: 136 LASQGGH 142
>gi|309795488|ref|ZP_07689905.1| Sel1 repeat protein [Escherichia coli MS 145-7]
gi|308120863|gb|EFO58125.1| Sel1 repeat protein [Escherichia coli MS 145-7]
Length = 327
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 69
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 70 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 113
>gi|291231060|ref|XP_002735478.1| PREDICTED: sel-1 suppressor of lin-12-like [Saccoglossus
kowalevskii]
Length = 583
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ +AQ LG + V+ D AF Y +KA DQ +P LG +Y+ G
Sbjct: 221 FTQAAESGNSNAQAFLGKMYSEGSSVVKQDNVTAFKYFKKAADQGNPIGQSGLGLLYMHG 280
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
V +D + AL F AS++G + G++ G+ V
Sbjct: 281 SGVDQDYSKALQHFQMASDQGWVDGQLHLGTMYYSGLGV 319
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELG 129
A E F A E+ NSN A +L K++ + V AA+ G+P Q LG
Sbjct: 217 ALEYFTQAAESGNSNAQA--FLGKMYSEGSSVVKQDNVTAFKYFKKAADQGNPIGQSGLG 274
Query: 130 CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRAS 189
+ Q +A + + A DQ LGT+Y +G VK+D A+ F+ AS
Sbjct: 275 LLYMHGSGVDQDYSKALQHFQMASDQGWVDGQLHLGTMYYSGLGVKRDYKMAVKYFNLAS 334
Query: 190 EKGH 193
+ GH
Sbjct: 335 QSGH 338
>gi|421717192|ref|ZP_16156498.1| sel1 repeat family protein [Helicobacter pylori R037c]
gi|407218642|gb|EKE88463.1| sel1 repeat family protein [Helicobacter pylori R037c]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|420437663|ref|ZP_14936645.1| cysteine-rich protein X [Helicobacter pylori Hp H-28]
gi|393052254|gb|EJB53203.1| cysteine-rich protein X [Helicobacter pylori Hp H-28]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRSVPKDEKKAVEYFRIATEKGYINAYINLGIMYMEGRGVPSNYVK 156
>gi|420419618|ref|ZP_14918706.1| cysteine-rich protein X [Helicobacter pylori NQ4161]
gi|393038984|gb|EJB40016.1| cysteine-rich protein X [Helicobacter pylori NQ4161]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|386743058|ref|YP_006216237.1| hypothetical protein S70_08415 [Providencia stuartii MRSN 2154]
gi|384479751|gb|AFH93546.1| hypothetical protein S70_08415 [Providencia stuartii MRSN 2154]
Length = 493
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 AANMGDPDAQ------YELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
AANMG AQ Y G RL +N Y QA Y+ ++A Q + AL+++G Y
Sbjct: 232 AANMGSAIAQMNMGDLYYEGHRLIEKNPY-----QAMYWYKRAASQGYTDALFVMGRGYE 286
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGV 208
GD V KD+ SA + + G AA+ +G+
Sbjct: 287 EGDGVGKDLGSAFEWYLLGANNGSVPAAMKVAEFYEKGL 325
>gi|218553186|ref|YP_002386099.1| hypothetical protein ECIAI1_0628 [Escherichia coli IAI1]
gi|417135759|ref|ZP_11980544.1| Sel1 repeat protein [Escherichia coli 5.0588]
gi|417167581|ref|ZP_12000363.1| Sel1 repeat protein [Escherichia coli 99.0741]
gi|419929009|ref|ZP_14446706.1| hypothetical protein EC5411_12283 [Escherichia coli 541-1]
gi|218359954|emb|CAQ97498.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|386153613|gb|EIH04902.1| Sel1 repeat protein [Escherichia coli 5.0588]
gi|386171299|gb|EIH43344.1| Sel1 repeat protein [Escherichia coli 99.0741]
gi|388404403|gb|EIL64866.1| hypothetical protein EC5411_12283 [Escherichia coli 541-1]
Length = 325
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|421712129|ref|ZP_16151468.1| sel1 repeat family protein [Helicobacter pylori R030b]
gi|407210691|gb|EKE80567.1| sel1 repeat family protein [Helicobacter pylori R030b]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
V DY ++A Y +KAVD P LG +Y G V KD A+ F A+EKG+
Sbjct: 78 VPKDY----KKAVEYFQKAVDNDMPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY 133
Query: 194 AGAAIAYGSLLLRGVQVP-------ECLTK 216
A I G + + G VP EC K
Sbjct: 134 TNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|420345856|ref|ZP_14847285.1| sel1 repeat family protein [Shigella boydii 965-58]
gi|391275908|gb|EIQ34691.1| sel1 repeat family protein [Shigella boydii 965-58]
Length = 325
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|387908369|ref|YP_006338703.1| cysteine-rich protein X [Helicobacter pylori XZ274]
gi|387573304|gb|AFJ82012.1| cysteine-rich protein X [Helicobacter pylori XZ274]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|386727165|ref|YP_006193491.1| hypothetical protein B2K_34355 [Paenibacillus mucilaginosus K02]
gi|384094290|gb|AFH65726.1| hypothetical protein B2K_34355 [Paenibacillus mucilaginosus K02]
Length = 1273
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
+F +I +AVD + A+ LG YLTG+ + KDI A RASE G + + S+L
Sbjct: 181 SFKFINRAVDLENSEAISFLGYSYLTGNKISKDIVKAERLLTRASELGSIKSKLILASVL 240
Query: 205 LRG 207
G
Sbjct: 241 FNG 243
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G LL + N G A++EL L + ++ Y+E+ V + H + L +
Sbjct: 325 GLELLKKSTNKGSKSAKFELARYLTTVFETEIEFEEGLQYLEELVQENHVDSKRHLSELI 384
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
++G CVKKDI + G + + Y L G V
Sbjct: 385 ISGQCVKKDIDIGIKLLMELVNDGDEESIVEYARLHFEGGSV 426
>gi|385230408|ref|YP_005790324.1| hypothetical protein HPPN135_05710 [Helicobacter pylori Puno135]
gi|344336846|gb|AEN18807.1| Cysteine-rich protein X [Helicobacter pylori Puno135]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|332281785|ref|ZP_08394198.1| conserved hypothetical protein [Shigella sp. D9]
gi|332104137|gb|EGJ07483.1| conserved hypothetical protein [Shigella sp. D9]
Length = 327
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 10 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 69
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 70 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 113
>gi|191168687|ref|ZP_03030467.1| hypothetical protein EcB7A_4052 [Escherichia coli B7A]
gi|190901279|gb|EDV61048.1| hypothetical protein EcB7A_4052 [Escherichia coli B7A]
Length = 325
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|420415606|ref|ZP_14914719.1| cysteine-rich protein X [Helicobacter pylori NQ4053]
gi|393031511|gb|EJB32582.1| cysteine-rich protein X [Helicobacter pylori NQ4053]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|384898638|ref|YP_005774017.1| cysteine-rich protein X [Helicobacter pylori F30]
gi|317178581|dbj|BAJ56369.1| cysteine-rich protein X [Helicobacter pylori F30]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAK 156
>gi|308184856|ref|YP_003928989.1| cysteine-rich protein X [Helicobacter pylori SJM180]
gi|308060776|gb|ADO02672.1| cysteine-rich protein X [Helicobacter pylori SJM180]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|385225769|ref|YP_005785694.1| cysteine-rich protein X [Helicobacter pylori 83]
gi|332673915|gb|AEE70732.1| cysteine-rich protein X [Helicobacter pylori 83]
Length = 287
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 81 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 140
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 141 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 187
>gi|385216320|ref|YP_005776277.1| cysteine-rich protein X [Helicobacter pylori F32]
gi|317180849|dbj|BAJ58635.1| cysteine-rich protein X [Helicobacter pylori F32]
Length = 256
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|307312640|ref|ZP_07592272.1| Sel1 domain protein repeat-containing protein [Escherichia coli W]
gi|378713976|ref|YP_005278869.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli KO11FL]
gi|386607982|ref|YP_006123468.1| hypothetical protein ECW_m0698 [Escherichia coli W]
gi|386702569|ref|YP_006166406.1| hypothetical protein KO11_20450 [Escherichia coli KO11FL]
gi|386708427|ref|YP_006172148.1| hypothetical protein WFL_03470 [Escherichia coli W]
gi|415827994|ref|ZP_11514716.1| hypothetical protein ECOK1357_1660 [Escherichia coli OK1357]
gi|417144332|ref|ZP_11986138.1| Sel1 repeat protein [Escherichia coli 1.2264]
gi|417230103|ref|ZP_12031689.1| Sel1 repeat protein [Escherichia coli 5.0959]
gi|417595576|ref|ZP_12246240.1| hypothetical protein EC30301_0703 [Escherichia coli 3030-1]
gi|425421292|ref|ZP_18802507.1| hypothetical protein EC01288_0664 [Escherichia coli 0.1288]
gi|432480036|ref|ZP_19722000.1| hypothetical protein A15U_01140 [Escherichia coli KTE210]
gi|432830610|ref|ZP_20064216.1| hypothetical protein A1YM_02415 [Escherichia coli KTE135]
gi|306907342|gb|EFN37847.1| Sel1 domain protein repeat-containing protein [Escherichia coli W]
gi|315059899|gb|ADT74226.1| conserved protein [Escherichia coli W]
gi|323185001|gb|EFZ70368.1| hypothetical protein ECOK1357_1660 [Escherichia coli OK1357]
gi|323379537|gb|ADX51805.1| Sel1 domain protein repeat-containing protein [Escherichia coli
KO11FL]
gi|345360098|gb|EGW92269.1| hypothetical protein EC30301_0703 [Escherichia coli 3030-1]
gi|383394096|gb|AFH19054.1| hypothetical protein KO11_20450 [Escherichia coli KO11FL]
gi|383404119|gb|AFH10362.1| hypothetical protein WFL_03470 [Escherichia coli W]
gi|386164215|gb|EIH26001.1| Sel1 repeat protein [Escherichia coli 1.2264]
gi|386206593|gb|EII11099.1| Sel1 repeat protein [Escherichia coli 5.0959]
gi|408347494|gb|EKJ61700.1| hypothetical protein EC01288_0664 [Escherichia coli 0.1288]
gi|431009885|gb|ELD24489.1| hypothetical protein A15U_01140 [Escherichia coli KTE210]
gi|431379859|gb|ELG64769.1| hypothetical protein A1YM_02415 [Escherichia coli KTE135]
Length = 325
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|193069119|ref|ZP_03050077.1| hypothetical protein EcE110019_3243 [Escherichia coli E110019]
gi|419863489|ref|ZP_14386017.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli O103:H25 str. CVM9340]
gi|192957663|gb|EDV88108.1| hypothetical protein EcE110019_3243 [Escherichia coli E110019]
gi|388342372|gb|EIL08407.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli O103:H25 str. CVM9340]
Length = 325
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRG 111
>gi|425789658|ref|YP_007017578.1| cysteine-rich protein X [Helicobacter pylori Aklavik117]
gi|425627973|gb|AFX91441.1| cysteine-rich protein X [Helicobacter pylori Aklavik117]
Length = 256
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYILLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGKGVPSNYAK 156
>gi|385220921|ref|YP_005782393.1| cysteine-rich protein X [Helicobacter pylori India7]
gi|317009728|gb|ADU80308.1| cysteine-rich protein X [Helicobacter pylori India7]
Length = 256
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|189502552|ref|YP_001958269.1| hypothetical protein Aasi_1212 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497993|gb|ACE06540.1| hypothetical protein Aasi_1212 [Candidatus Amoebophilus asiaticus
5a2]
Length = 304
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
A G P+AQ LG + V DY+++ + + EKA Q + A + LG Y G
Sbjct: 202 ATAQGHPNAQCRLGWMYQTGRGVRRDYIKARE----WYEKAAAQGNAQAQFNLGETYQNG 257
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
VKKD A AL F +A+E+G+ GA G + G + + T+
Sbjct: 258 WGVKKDYAKALEWFQKAAEQGNVGAQHKLGEMYYYGQGIQKNYTR 302
>gi|147667674|gb|ABQ45803.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|417511671|ref|ZP_12176216.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353642229|gb|EHC86738.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
Length = 647
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 75/188 (39%), Gaps = 25/188 (13%)
Query: 58 ELNDR-----RLIPLLKTAKENFELALEADNSNT----HARYWLSKLHLKYHVPGACKAM 108
E NDR +P + KE E A + D H LS+L+ V
Sbjct: 432 EFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDV------- 484
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
+ A D AQY LG + E + D A ++ ++ +Q HPGAL L Y
Sbjct: 485 -----TNKAKQDDSTAQYHLG---KYEFECTNYDA-AMKWLTQSAEQNHPGALLFLAYAY 535
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
GD V +D L +A+E G + A + G L L G +P+ L + +A +
Sbjct: 536 NDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQG 595
Query: 229 RANLESNL 236
A NL
Sbjct: 596 NAQAHYNL 603
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ L AA +G+ DAQ E+G + ++ +A+ +I+K+ DQ + A Y LG +Y
Sbjct: 550 SYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRN 609
Query: 171 GDCVKKDIASA 181
GD V+KD+ A
Sbjct: 610 GDGVEKDLNKA 620
>gi|445432809|ref|ZP_21439482.1| Sel1 repeat protein [Acinetobacter baumannii OIFC021]
gi|444758147|gb|ELW82649.1| Sel1 repeat protein [Acinetobacter baumannii OIFC021]
Length = 259
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 122 PDAQYELGCRLRVENDYVQSDQ--QAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
P+AQY +G L +N Y S +A + + A Q + A Y L YL+G+ V+KDI
Sbjct: 108 PEAQYNMG--LMYDNGYYVSKNRSKALEFYKLAAHQGYAKAQYNLANAYLSGNGVQKDIN 165
Query: 180 SALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTKLNAKRVSAAKKARANL 232
AL + +A+++ + A ++ G V E T++ K + A+ A +
Sbjct: 166 LALELYKKAADQNLSEAQYNLANIYSDGSLVKQDNKKALELYTQVAEKGIPEAQNNLAYM 225
Query: 233 ESNLMNPVEKAKEQFEVAAQAG 254
+N+ + E AK F+ AA G
Sbjct: 226 YANVYSDYENAKFWFKKAADNG 247
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G P AQ +L +S+++A+Y+ EKA P A Y +G +Y G V
Sbjct: 66 AAEKGLPIAQNDLAGMYLKGIGTQKSEEKAYYWYEKAAKNDFPEAQYNMGLMYDNGYYVS 125
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
K+ + AL + A+ +G+A A + L G V
Sbjct: 126 KNRSKALEFYKLAAHQGYAKAQYNLANAYLSGNGV 160
>gi|420398591|ref|ZP_14897803.1| cysteine-rich protein X [Helicobacter pylori CPY1962]
gi|393013580|gb|EJB14755.1| cysteine-rich protein X [Helicobacter pylori CPY1962]
Length = 256
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAK 156
>gi|147667692|gb|ABQ45812.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|421722000|ref|ZP_16161270.1| sel1 repeat family protein [Helicobacter pylori R055a]
gi|407223585|gb|EKE93371.1| sel1 repeat family protein [Helicobacter pylori R055a]
Length = 256
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYRKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|399018906|ref|ZP_10721062.1| Sel1 repeat protein, partial [Herbaspirillum sp. CF444]
gi|398099218|gb|EJL89487.1| Sel1 repeat protein, partial [Herbaspirillum sp. CF444]
Length = 219
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 76 ELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALL--VDAANMGDPDAQYELGCRLR 133
++A A + N A+Y L++++ G K AA+L AAN G DAQY LG
Sbjct: 40 QVASAAASGNAEAQYTLARMYNSGE--GVPKDPAAAVLWLQKAANQGHADAQYSLGTSYL 97
Query: 134 VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
+ ++ A ++ K+ Q + A LG +YL GD V +D AL +A +G
Sbjct: 98 LGYGVPKNAVAAVEWLLKSAQQGNTLAQTNLGAMYLNGDGVAQDFRQALLWLEKAGARGQ 157
Query: 194 AGAAIAYGSLLLRGVQV 210
A + G + G V
Sbjct: 158 PLAQYSLGRMYQNGYGV 174
>gi|421710568|ref|ZP_16149921.1| sel1 repeat family protein [Helicobacter pylori R018c]
gi|421723801|ref|ZP_16163052.1| sel1 repeat family protein [Helicobacter pylori R056a]
gi|407209448|gb|EKE79342.1| sel1 repeat family protein [Helicobacter pylori R018c]
gi|407223948|gb|EKE93729.1| sel1 repeat family protein [Helicobacter pylori R056a]
Length = 256
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|147667668|gb|ABQ45800.1| hypothetical protein hp1117 [Helicobacter pylori]
Length = 256
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|323451413|gb|EGB07290.1| hypothetical protein AURANDRAFT_64980 [Aureococcus anophagefferens]
Length = 652
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD AQ LG L E + ++AF Y A +Q A LG YL G+ +
Sbjct: 337 AADRGDAFAQNNLGALLDTEKKF----EEAFRYYTLAANQGETFAENSLGCCYLWGEGTE 392
Query: 176 KDIASALWCFHRASEKGH----------------AGAAIAYGSLLLRGVQVPECLTKLNA 219
D+ A + F RA+ KGH A + L G+ V L K A
Sbjct: 393 VDVGKARYWFERAAAKGHEKARGNLAELNAQLGNVSAMVRLAELYNEGLGVK--LDKKKA 450
Query: 220 KRV--SAAKKARANLESN---LMNPVEKAKEQFE---VAAQAGCNL 257
+R+ +AA + A ++N L++ V+K +E F +AA+ G L
Sbjct: 451 ERLYRTAADRGHAVAQANLGFLLDSVKKHEEAFRYYALAAEQGFTL 496
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA+ G AQ LG L D V+ ++AF Y A +Q A LG Y G
Sbjct: 453 LYRTAADRGHAVAQANLGFLL----DSVKKHEEAFRYYALAAEQGFTLAEACLGICYRDG 508
Query: 172 DCVKKDIASALWCFHRASEKGH--------AGAAIAYGSLLLRGVQV----PECLTKLNA 219
D + D+ + + F RA+ KG+ A YG L GV++ E L + A
Sbjct: 509 DGTEVDLGKSRYWFERAAAKGNELGDVDAMESLAEMYGKGL--GVKLDKKKAERLYRTAA 566
Query: 220 KRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNL 257
R SA + R +L +E+A + +AA G
Sbjct: 567 DRGSAFAQNRIACLLDLEKRMEEAFRYYALAADQGATF 604
>gi|269467838|gb|EEZ79584.1| hypothetical protein Sup05_0906 [uncultured SUP05 cluster
bacterium]
Length = 324
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+ A+ +GD DAQ LG Q+DQ+ +EK+ D+ H A Y LG +Y G
Sbjct: 31 IFGHASKIGDLDAQTALGIMHIEGKGTAQNDQKGISLLEKSADKGHAKAQYYLGAMYYLG 90
Query: 172 DCVKKDIASALWCFHRASEKGHAGA 196
V++D A +A+ + HA A
Sbjct: 91 IGVEQDFKKAHQWIKKAALQSHADA 115
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 78 ALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVEND 137
A A N ++Y+L+K+H K AA G DAQY LG + N
Sbjct: 141 AKSAKFGNKDSQYYLAKMHDK----NKDYKNAHTWYEKAARRGHADAQYRLGELYKKGNG 196
Query: 138 YVQSDQQAFYYIEKAVDQLHPGALYLLGTVY-LTGDCVKKDIASALWCFHR 187
VQ+ ++A ++ EKA H L LG +Y + G V+KD A + R
Sbjct: 197 VVQNHKEALFWYEKASQSNHVEVLGALGLIYNIGGLGVEKDHEKAQAYYQR 247
>gi|420402255|ref|ZP_14901445.1| cysteine-rich protein X [Helicobacter pylori CPY6081]
gi|393016996|gb|EJB18151.1| cysteine-rich protein X [Helicobacter pylori CPY6081]
Length = 256
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAK 156
>gi|329121543|ref|ZP_08250166.1| Sel1 repeat superfamily protein [Dialister micraerophilus DSM
19965]
gi|327468842|gb|EGF14315.1| Sel1 repeat superfamily protein [Dialister micraerophilus DSM
19965]
Length = 409
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +G PDA Y+ L+ ++ Q++ + +KA + A Y LG +Y TG+ +
Sbjct: 280 AATLGHPDAMYKTAECLQSGQGCEKNIQESINWYKKAYENHTSAAAYSLGMIYYTGEEIM 339
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+++ +A+ F +++E+G+ A G RG V
Sbjct: 340 ENMETAIKWFMKSAEQGYVPAMYYLGLCFARGAGV 374
>gi|117925248|ref|YP_865865.1| serine/threonine protein kinase [Magnetococcus marinus MC-1]
gi|117609004|gb|ABK44459.1| serine/threonine protein kinase [Magnetococcus marinus MC-1]
Length = 705
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+ DAQ LG +R + Q+A + E A+ Q HP A Y + +Y G VK
Sbjct: 446 AAGQGNADAQLHLGLMVREGRAKKLTLQKAAPWFELAMIQNHPQAHYQMAQLYELGRGVK 505
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
KD+ A + +A++ + A +A G +G+ V
Sbjct: 506 KDLHRAFTLYQKAADGQVSLAKVALGRFFAQGLGV 540
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 116 AANMGDPDAQYELGC-RLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA +GD A Y+LG L+V + ++ + +A + H + Y LG +Y GD
Sbjct: 373 AATLGDVAAMYQLGLLFLQVAQELGDGGEEGKRWFYQAAKRHHAPSWYQLGRIYRYGDGG 432
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
++D AL CF A+ +G+A A + G ++ G
Sbjct: 433 QQDHKKALHCFQLAAGQGNADAQLHLGLMVREG 465
>gi|420400631|ref|ZP_14899831.1| cysteine-rich protein X [Helicobacter pylori CPY3281]
gi|393016902|gb|EJB18058.1| cysteine-rich protein X [Helicobacter pylori CPY3281]
Length = 256
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAK 156
>gi|323448992|gb|EGB04884.1| hypothetical protein AURANDRAFT_31902 [Aureococcus anophagefferens]
Length = 347
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA+ GD DAQ +LG LR E Y ++AF Y A DQ + LG Y G +
Sbjct: 54 AADRGDADAQNDLGNLLRPEKKY----EEAFRYYALAADQGYTEGELNLGICYHYGKGTE 109
Query: 176 KDIASALWCFHRASEKG 192
D+ A + F RA+ KG
Sbjct: 110 VDLGKARYWFERAAAKG 126
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L AA+ GD Q LG L E + ++AF Y A DQ + LG Y G
Sbjct: 256 LYRTAADRGDAFGQTNLGTSLYSEEKF----EEAFRYYALAADQGLTSGEFCLGCCYKDG 311
Query: 172 DCVKKDIASALWCFHRASEKGH 193
+ D+ A + F RA+ KG+
Sbjct: 312 AGTEVDLGKARYWFERAAAKGY 333
>gi|384889728|ref|YP_005764030.1| cysteine-rich protein X [Helicobacter pylori v225d]
gi|297380294|gb|ADI35181.1| cysteine-rich protein X [Helicobacter pylori v225d]
Length = 256
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVKYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|296112632|ref|YP_003626570.1| hypothetical protein MCR_0405 [Moraxella catarrhalis RH4]
gi|295920326|gb|ADG60677.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
BBH18]
Length = 302
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AAN G +AQ+ LG Q +A + KA +Q + GA + L +Y G
Sbjct: 135 FTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQ 194
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V++D A+ + +A+ +GHA A G + G V + K AA + A
Sbjct: 195 GVRQDDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQA 254
Query: 233 ESNL 236
++NL
Sbjct: 255 QNNL 258
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AAN G+ +AQ+ LG V DY +S + + KA Q + A + L +Y G
Sbjct: 66 AANQGEAEAQHNLGVMYYEGQGVRQDYYKSVE----WYTKAAKQGYADAQFNLALMYAQG 121
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
D V++D A F +A+ +G A A + G + G V + K AA + A
Sbjct: 122 DGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAG 181
Query: 232 LESNL 236
+ NL
Sbjct: 182 AQFNL 186
>gi|300021944|ref|YP_003754555.1| Sel1 domain-containing protein repeat-containing protein
[Hyphomicrobium denitrificans ATCC 51888]
gi|299523765|gb|ADJ22234.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans ATCC 51888]
Length = 872
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 98 KYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLH 157
++ +P A +G L AA GD A++E+G RL Q ++A + +A DQ
Sbjct: 649 RFELPAAT--VGPLSLRLAAANGDASAEFEVGARLAEGKGTPQDFKEAAKWYRRAADQDL 706
Query: 158 PGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
A Y LGT Y G +K D A A + RA+ KG+
Sbjct: 707 APAQYRLGTFYERGLGMKADRAQAQAWYKRAAAKGN 742
>gi|385222535|ref|YP_005771668.1| hypothetical protein HPSA_05435 [Helicobacter pylori SouthAfrica7]
gi|147667678|gb|ABQ45805.1| hypothetical protein hp1117 [Helicobacter pylori]
gi|317011314|gb|ADU85061.1| hypothetical protein HPSA_05435 [Helicobacter pylori SouthAfrica7]
Length = 256
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A++KG+ A I G + + G VP K
Sbjct: 110 EGKGVPKDEKKAVEYFQIAADKGYTNAYINLGIMYMEGRGVPSNYAK 156
>gi|108563480|ref|YP_627796.1| cysteine-rich protein X [Helicobacter pylori HPAG1]
gi|107837253|gb|ABF85122.1| cysteine-rich protein X [Helicobacter pylori HPAG1]
Length = 256
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
>gi|422782566|ref|ZP_16835351.1| Sel1 [Escherichia coli TW10509]
gi|323976370|gb|EGB71460.1| Sel1 [Escherichia coli TW10509]
Length = 184
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 102 PGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGA 160
PG+ AA + A + G +QY LG +D D QA Y+ E++ +Q +P A
Sbjct: 44 PGSLPFTTAATELSAIH-GHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRA 102
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
LG +YL G VK D A+ + A+E+GH A G + G +
Sbjct: 103 QSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGHVHAQYTLGLIYRNGTGI 152
>gi|432769500|ref|ZP_20003855.1| hypothetical protein A1S9_02295 [Escherichia coli KTE50]
gi|432960143|ref|ZP_20150349.1| hypothetical protein A15E_01251 [Escherichia coli KTE202]
gi|433061895|ref|ZP_20248854.1| hypothetical protein WIO_00716 [Escherichia coli KTE125]
gi|431318181|gb|ELG05948.1| hypothetical protein A1S9_02295 [Escherichia coli KTE50]
gi|431478252|gb|ELH58001.1| hypothetical protein A15E_01251 [Escherichia coli KTE202]
gi|431587565|gb|ELI58938.1| hypothetical protein WIO_00716 [Escherichia coli KTE125]
Length = 325
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIIGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGRKYSEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFMKAAE 272
>gi|395223463|ref|ZP_10403264.1| Sel1 domain-containing protein [Pontibacter sp. BAB1700]
gi|394452707|gb|EJF07925.1| Sel1 domain-containing protein [Pontibacter sp. BAB1700]
Length = 346
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA MG +A ++G RL E V Q+ +Q F + KA + + A++++G Y G +
Sbjct: 12 AAEMGISNAMLQIG-RLYSEGLGVDQNAKQGFKWFLKAAENGNSDAMFIVGIWYSRGIGI 70
Query: 175 KKDIASALWCFHRASEKGHAGA----AIAYGSLLLRGVQV 210
+ D + L F RA+EKG+ A IAY L+ RG V
Sbjct: 71 ETDTSEGLRWFRRAAEKGNGSAMANLGIAY--LMGRGTAV 108
>gi|58039182|ref|YP_191146.1| hypothetical protein GOX0713 [Gluconobacter oxydans 621H]
gi|58001596|gb|AAW60490.1| Hypothetical protein GOX0713 [Gluconobacter oxydans 621H]
Length = 590
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 152 AVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQ-V 210
A +Q H GA LG +YLTG+ V +D A F ASE G A A +G+L+L G
Sbjct: 313 AAEQKHAGAARALGLLYLTGNGVHQDPDVAAHWFKVASEAGDAHADADFGNLILAGASAT 372
Query: 211 PECLTKLNAKRVSAAKKARA----NLESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQR 264
P+ L+A+ AA+K NL V K+ E A RW+Q+
Sbjct: 373 PDEKQALHARFEKAAEKGDLVGAYNLGVCFAEGVTGTKDGREAA---------RWMQK 421
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 160 ALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
A +LG +Y +G V +D+ A FH+A+E+ A YG +LL G P
Sbjct: 213 AFDILGRMYESGSGVPRDLGKAASYFHQAAERNIVTAQARYGLMLLEGTGTP 264
>gi|307205848|gb|EFN84031.1| Protein sel-1-like protein 1 [Harpegnathos saltator]
Length = 764
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV--QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDC 173
AA+ G+P A LG ++ +E + Q ++ A+ Y +KA + +P LG +YL G
Sbjct: 395 AADAGNPVAMAFLG-KIYLEGSEIVKQDNETAYKYFKKAAELGNPVGQSGLGLMYLYGMG 453
Query: 174 VKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
V+++ A FH A+E+G + G++ G+ V
Sbjct: 454 VERNTGKAWQYFHHAAEQGWVDGQLQLGNMYFSGIGV 490
>gi|219870295|ref|YP_002474670.1| Sel1 domain protein, repeat-containing protein [Haemophilus
parasuis SH0165]
gi|219690499|gb|ACL31722.1| Sel1 domain protein, repeat-containing protein [Haemophilus
parasuis SH0165]
Length = 251
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ LG + + Q QA + +KA +Q P A +LGT+Y+ G+ V+
Sbjct: 160 AAEQGDASAQFNLGLKYQNGQGVSQDYHQALKWFQKAAEQGDPKAQGMLGTMYVLGEGVR 219
Query: 176 KDIASALWCFHRASEKG 192
+++ +A +A + G
Sbjct: 220 QNLETAKMWLGKACDSG 236
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
L + A G AQ LG + + Q+ QAF + +KA +Q A LG +Y G
Sbjct: 48 LFKELAEQGVAQAQAILGLMYKEGDGVKQNYHQAFKWFQKAAEQGDKNAQLYLGFMYYDG 107
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
+ V++D A F +A+E+G A G + G V + + AA++ A+
Sbjct: 108 EGVRQDYHQAAKWFQKAAEQGDVMAQNNLGVMYSDGQGVRQDYHQAVKWYQKAAEQGDAS 167
Query: 232 LESNLMNPVEKAKEQFEVAAQAGCNLGLRWLQRIEEE 268
+ NL + + + QA L+W Q+ E+
Sbjct: 168 AQFNLGLKYQNGQGVSQDYHQA-----LKWFQKAAEQ 199
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ LG Q QA + +KA +Q A + LG Y G V
Sbjct: 124 AAEQGDVMAQNNLGVMYSDGQGVRQDYHQAVKWYQKAAEQGDASAQFNLGLKYQNGQGVS 183
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
+D AL F +A+E+G A G++ + G V + L
Sbjct: 184 QDYHQALKWFQKAAEQGDPKAQGMLGTMYVLGEGVRQNL 222
>gi|225456173|ref|XP_002282611.1| PREDICTED: protein sel-1 homolog 2 [Vitis vinifera]
Length = 674
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA------AIAYG 201
Y EKAVD G Y LG +YL G VK+D+ A F A+++G A G
Sbjct: 344 YFEKAVDHDEAGGHYNLGVMYLKGVGVKRDVKLACNYFIMAAKEGQPKAFYQLAKMFHTG 403
Query: 202 SLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAG 254
L R + + L KL A+R + +R LES L V KA + A+ G
Sbjct: 404 VGLKRNLPMATALYKLVAERGPWSSLSRWALESYLKGDVGKAFLLYSRMAELG 456
>gi|420535513|ref|ZP_15033858.1| cysteine-rich protein X [Helicobacter pylori Hp M2]
gi|393139798|gb|EJC40172.1| cysteine-rich protein X [Helicobacter pylori Hp M2]
Length = 241
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGS 202
++A Y +KAVD P LG +Y G V KD A+ F A+EKG+ A I G
Sbjct: 68 KKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGYTNAYINLGI 127
Query: 203 LLLRGVQVP-------ECLTK 216
+ + G VP EC K
Sbjct: 128 MYMEGRGVPSNYAKATECFRK 148
>gi|416242044|ref|ZP_11633178.1| tetratricopeptide repeat family protein [Moraxella catarrhalis BC7]
gi|326571605|gb|EGE21620.1| tetratricopeptide repeat family protein [Moraxella catarrhalis BC7]
Length = 302
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AAN G +AQ+ LG Q +A + KA +Q + GA + L +Y G
Sbjct: 135 FTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQ 194
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V++D A+ + +A+ +GHA A G + G V + K AA + A
Sbjct: 195 GVRQDDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQA 254
Query: 233 ESNL 236
++NL
Sbjct: 255 QNNL 258
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AAN G+ +AQ+ LG V DY +S + + KA Q + A + L +Y G
Sbjct: 66 AANQGEAEAQHNLGVMYYEGQGVRQDYYKSVE----WYTKAAKQGYADAQFNLALMYAQG 121
Query: 172 DCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARAN 231
D V++D A F +A+ +G A A + G + G V + K AA + A
Sbjct: 122 DGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAG 181
Query: 232 LESNL 236
+ NL
Sbjct: 182 AQFNL 186
>gi|170718127|ref|YP_001783537.1| Sel1 domain-containing protein [Haemophilus somnus 2336]
gi|168826256|gb|ACA31627.1| Sel1 domain protein repeat-containing protein [Haemophilus somnus
2336]
Length = 252
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 77/198 (38%), Gaps = 10/198 (5%)
Query: 48 KEVDRVID-YCELNDRRLIPLLKTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACK 106
+++DR Y + N PLLK E N A+ L +++
Sbjct: 27 EKLDRATQLYKQQNYSAAFPLLKQLGEK---------GNAKAQAVLGTMYMFGQGITQNS 77
Query: 107 AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGT 166
AA GD AQ LG Q+ QQA Y+ KA +Q LG
Sbjct: 78 QQAVYWYTKAAEQGDAKAQSMLGFMYTNGLGVTQNSQQAVYWWTKAAEQGAAEVQLYLGV 137
Query: 167 VYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAK 226
+Y G V ++ A++ F +A+E+G A A + G + G V + + AA+
Sbjct: 138 MYANGQGVAQNYQQAVYWFTKAAEQGIAEAQLYLGVMYANGQGVAQNYQQAVYWFTKAAE 197
Query: 227 KARANLESNLMNPVEKAK 244
+ A + L + EK +
Sbjct: 198 QGIAEAQLYLGDMYEKGR 215
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AA G +AQ LG Q+ QQA Y+ KA +Q A LG +Y G
Sbjct: 156 FTKAAEQGIAEAQLYLGVMYANGQGVAQNYQQAVYWFTKAAEQGIAEAQLYLGDMYEKGR 215
Query: 173 CVKKDIASALWCFHRASEKGHA 194
+K++++A + +A + G+A
Sbjct: 216 GAQKNVSTAKAFYGQACDNGNA 237
>gi|420403918|ref|ZP_14903103.1| cysteine-rich protein X [Helicobacter pylori CPY6261]
gi|393018790|gb|EJB19936.1| cysteine-rich protein X [Helicobacter pylori CPY6261]
Length = 256
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 110 AALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYL 169
A+ A G+P A LG + ++A Y +KAVD P LG +Y
Sbjct: 50 ASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYK 109
Query: 170 TGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP-------ECLTK 216
G V KD A+ F A+EKG+ A I G + + G VP EC K
Sbjct: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRK 163
>gi|315224578|ref|ZP_07866404.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea F0287]
gi|314945444|gb|EFS97467.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea F0287]
Length = 815
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+ + +A+Y L++ + G L A+ G+P+AQ EL R Q
Sbjct: 66 AETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVEQ 125
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
S ++ + IEK ++ +P L Y +G+ V KD+ A + +AS+ G++ A +
Sbjct: 126 SKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEMLL 185
Query: 201 GSLLLR-GVQVPEC---LTKLNAKRVSAAKK--ARANLESNLMNPVE-KAKEQFEVAAQA 253
S PE LT++ K + A++ A A LE + E KA E E AA+
Sbjct: 186 ASWAYEINASNPEAIERLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKG 245
Query: 254 G 254
G
Sbjct: 246 G 246
>gi|291336870|gb|ADD96401.1| hypothetical protein Aasi_0854 [uncultured organism
MedDCM-OCT-S09-C234]
Length = 752
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 112 LLVDAANMGDPDAQYELG-CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
L+ A G+ AQY +G C L E ++ +A YI A DQ + A Y LG Y
Sbjct: 99 FLLSRAEDGEAGAQYNIGICYLSDEKGVKKNYARAVEYIRSAADQGYVPAYYELGLRYAY 158
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
G+ ++KD A A+++G A A + G L G V + + + AAKK+
Sbjct: 159 GEGIEKDDIQAAIFLKNAADEGFAAAEYSLGVCHLNGKGVELDIDQAMSLLTRAAKKS 216
>gi|347538874|ref|YP_004846298.1| Sel1 repeat-containing protein [Pseudogulbenkiania sp. NH8B]
gi|345642051|dbj|BAK75884.1| Sel1 repeat-containing protein [Pseudogulbenkiania sp. NH8B]
Length = 183
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G+P AQY L R R+ +A +++++ Q +PGA+ LG Y G V
Sbjct: 83 AAEQGEPIAQYNLATRYRLGEGVPLDLDEAVKWLKRSAGQDYPGAVADLGVAYWLGHGVA 142
Query: 176 KDIASALWCFHRASE---KGHAGAAIA 199
KD+ A F A+E HAG +++
Sbjct: 143 KDVIRAAALFDSAAEYVPGHHAGFSLS 169
>gi|343498531|ref|ZP_08736560.1| hypothetical protein VITU9109_19422 [Vibrio tubiashii ATCC 19109]
gi|418478370|ref|ZP_13047481.1| hypothetical protein VT1337_08266 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342824254|gb|EGU58813.1| hypothetical protein VITU9109_19422 [Vibrio tubiashii ATCC 19109]
gi|384574090|gb|EIF04566.1| hypothetical protein VT1337_08266 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 343
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L +A + AQ EL R + QSD +AFY+ ++A + A LG Y G
Sbjct: 23 LTQSAQNNNVHAQLELADRYQKGQGVTQSDSEAFYWYQQAANNGSDSAAANLGRAYYKGL 82
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
K DI +A++ +A+ G A + G L + + P+ L
Sbjct: 83 GTKVDIENAIFWLSKAALSGDKQAPLLLGQLYEQAKEQPDNL 124
>gi|290974713|ref|XP_002670089.1| predicted protein [Naegleria gruberi]
gi|284083644|gb|EFC37345.1| predicted protein [Naegleria gruberi]
Length = 331
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLT 170
+ AANMG+ +A+Y +G Q + AF + ++A + H ALYL+G Y
Sbjct: 44 FFLQAANMGNANAEYYVGHMYHKGLGMEQKEIPLAFMWYQRAAQKGHVQALYLVGIFYYF 103
Query: 171 GDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
G V+K + ++A+E GH+ A G L G V
Sbjct: 104 GFGVEKSFEKSFEYCNKAAESGHSQAQFDVGLNYLEGEGV 143
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +GD +QY++ + + +AF + K+ Q +P + +G +Y G V+
Sbjct: 193 AAELGDSGSQYDVAAMYEFGDGTERDLSKAFEWYSKSAHQKNPQGEFQVGLMYCLGKHVE 252
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVP 211
KD++ L RA+E+G + A + RG P
Sbjct: 253 KDLSKGLEFALRAAEQGLSKAQYVVADMYARGDGTP 288
>gi|365879407|ref|ZP_09418831.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365292658|emb|CCD91362.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 360
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 100 HVPGACK---AMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQL 156
VP + K A+G L +AA GDP A YE+G RL + ++A + ++A
Sbjct: 118 QVPASEKLPDAIGGPALRNAALKGDPTAAYEVGVRLAEGKGVAPNYEEAAKWYDRAAQAG 177
Query: 157 HPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
A++ LGT Y G VKKD A + A+E+G+A A
Sbjct: 178 LIPAVFRLGTFYEKGLGVKKDADIARRYYVVAAERGNAKA 217
>gi|297734336|emb|CBI15583.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 148 YIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA------AIAYG 201
Y EKAVD G Y LG +YL G VK+D+ A F A+++G A G
Sbjct: 246 YFEKAVDHDEAGGHYNLGVMYLKGVGVKRDVKLACNYFIMAAKEGQPKAFYQLAKMFHTG 305
Query: 202 SLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAG 254
L R + + L KL A+R + +R LES L V KA + A+ G
Sbjct: 306 VGLKRNLPMATALYKLVAERGPWSSLSRWALESYLKGDVGKAFLLYSRMAELG 358
>gi|339504351|ref|YP_004691771.1| hypothetical protein RLO149_c028480 [Roseobacter litoralis Och 149]
gi|338758344|gb|AEI94808.1| hypothetical protein RLO149_c028480 [Roseobacter litoralis Och 149]
Length = 235
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 75 FELALEADNS-----NTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELG 129
FE A + NS + A +WLS +H+ K G + AA MG AQ LG
Sbjct: 29 FETAYDVFNSCAKAGDATAWFWLSTMHMNGDGRAVDKTTGFKCCLKAAEMGSIQAQTNLG 88
Query: 130 CRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
+ ++ D V D + ++ +A D GA + T+ G V+KD+ A+ + A
Sbjct: 89 V-MYIQGDGVAEDIEVGLKWLCRAADAGDTGAQFNAATLLSAGKIVEKDLEMAVKYYQMA 147
Query: 189 SEKGHAGAAIAYGSLLLRGVQVPE 212
++ G+ A G G VP+
Sbjct: 148 ADSGYHPAQARLGFSYRNGFGVPK 171
>gi|260753370|ref|YP_003226263.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552733|gb|ACV75679.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 594
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQ-AFYYIEKAVDQ-LHPGALYLLGTVYLTGDC 173
AA +GDP A+Y + +N + D AFY++EK+ +Q HP A LG Y G
Sbjct: 255 AARLGDPFAEYNMARFYNPQNGSKRVDPDTAFYWMEKSANQGFHP-AESALGRFYRDGQG 313
Query: 174 VKKDIASALWCFHRASEKGH 193
+K+ A + ++RA+E G+
Sbjct: 314 TEKNPDKAFYWYNRAAEGGN 333
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG-DCV 174
AA+ G+P A+Y LG Q QA Y+IEK+ +Q +P A LLG +Y G +
Sbjct: 65 AASGGNPKAEYNLGALYHEGLGTAQDFLQARYWIEKSAEQGYPAAEALLGNIYHFGRKGI 124
Query: 175 KKDIASALWCFHRASEKG 192
+D+ A + +A+ G
Sbjct: 125 PEDLEKAFYWTEKAANHG 142
>gi|118602485|ref|YP_903700.1| Sel1 domain-containing protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567424|gb|ABL02229.1| Sel1 domain protein repeat-containing protein [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 149
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 108 MGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
M LL A G+ +A + +G V++ F +A Q H A ++LG
Sbjct: 28 MAYQLLAPLATKGNTEALWRVGMMQMNGLGMVENQPLGFENFLQAASQGHAFAHHMLGVA 87
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
Y+TG+ V+KDI ++ F + +E G G A G L +V + L K
Sbjct: 88 YMTGEGVEKDIVKSIEWFEKGAEFGIPGPMYALGMLFEDDKEVKQDLEK 136
>gi|237807988|ref|YP_002892428.1| Sel1 domain-containing protein repeat-containing protein [Tolumonas
auensis DSM 9187]
gi|237500249|gb|ACQ92842.1| Sel1 domain protein repeat-containing protein [Tolumonas auensis
DSM 9187]
Length = 282
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 81 ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQ 140
A+N N +A+ + ++ + A A GD +AQ +G Q
Sbjct: 64 AENDNIYAQTLIGSMYFRGKGTPQSYEQAAYWFQKVAKQGDVNAQAIVGSMYSQGKGVPQ 123
Query: 141 SDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAY 200
++ QA + +K Q++ + ++G +YL+G V ++ A + + A+E+G + A
Sbjct: 124 NNAQASDWFQKVARQVNLNPMVVVGDIYLSGQWVGQNNEQAAYWYQMAAEQGDSNAQFRL 183
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNL 236
G++ G Q+P+ + +A++ N ++ L
Sbjct: 184 GTMYYGG-QIPQDFVQAAYWYQKSAEQGNFNAQAFL 218
>gi|449274840|gb|EMC83918.1| Protein sel-1 like protein 1, partial [Columba livia]
Length = 769
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A Y +KA D +P LG YL G V
Sbjct: 381 AANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKAADMGNPVGQSGLGMAYLYGRGV 440
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ AL F +A+E+G + GS+ G+ V
Sbjct: 441 PVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 476
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 75 FELALEADNS-NTHARYWLSKLHLK-YHVPGACKAMGAALLVDAANMGDPDAQYELGCRL 132
FE +A N+ N+HA +L K++ + V AA+MG+P Q LG
Sbjct: 375 FEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKAADMGNPVGQSGLGMAY 434
Query: 133 RVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
+ + A Y +KA +Q LG++Y G VK+D AL F+ AS+ G
Sbjct: 435 LYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGG 494
Query: 193 H 193
H
Sbjct: 495 H 495
>gi|340363637|ref|ZP_08685960.1| Sel1 repeat superfamily protein [Neisseria macacae ATCC 33926]
gi|339885316|gb|EGQ75045.1| Sel1 repeat superfamily protein [Neisseria macacae ATCC 33926]
Length = 267
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G AQY LG + Q D+QA + KA +Q A LG +Y G V+
Sbjct: 143 AAEQGHAVAQYNLGVAYKKGEGVRQDDKQAVQWYRKAAEQGLAQAQSNLGVMYGKGQGVR 202
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPE 212
+D A A+ + +A+E+G A A G + G V +
Sbjct: 203 QDYAKAVSWYRKAAEQGQAEAQYNLGVMYEEGQGVSK 239
>gi|323455354|gb|EGB11222.1| hypothetical protein AURANDRAFT_21499, partial [Aureococcus
anophagefferens]
Length = 149
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K A L AA+ GD AQ LG L E + ++AF Y A DQ + A + LG
Sbjct: 52 KKKAARLYRAAADRGDAVAQNNLGLFLDSEGKF----EEAFRYYALAADQGYTNAEHNLG 107
Query: 166 TVYLTGDCVKKDIASALWCFHRASEKG 192
YL G+ + D+ A + F RA+ KG
Sbjct: 108 CCYLDGEGTEVDLGKARYWFERAAAKG 134
>gi|224051584|ref|XP_002200585.1| PREDICTED: protein sel-1 homolog 1 [Taeniopygia guttata]
Length = 791
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A Y +KA D +P LG YL G V
Sbjct: 403 AANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKAADMGNPVGQSGLGMAYLYGRGV 462
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ AL F +A+E+G + GS+ G+ V
Sbjct: 463 PVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 498
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 75 FELALEADNS-NTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYELGCR 131
FE +A N+ N+HA +L K++ + VP + + AA+MG+P Q LG
Sbjct: 397 FEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNET-ALQYFKKAADMGNPVGQSGLGMA 455
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
+ + A Y +KA +Q LG++Y G VKKD AL F+ AS+
Sbjct: 456 YLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQALKYFNLASQG 515
Query: 192 GH 193
GH
Sbjct: 516 GH 517
>gi|373120728|ref|ZP_09534772.1| hypothetical protein HMPREF0995_05608 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371656380|gb|EHO21710.1| hypothetical protein HMPREF0995_05608 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 998
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALL---VDAANMGDPDAQYE 127
A+E FE A + DN HA+Y L+++ ++ P + A L AA G AQY
Sbjct: 654 AREWFEQASKLDNP--HAQYQLARM--IFNDPSSTPEQTAQALERLTKAAEAGQDCAQYA 709
Query: 128 LGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD-CVKKDIASALWCFH 186
LG R + Q+A A + + A + LG +YL GD + +D A+AL
Sbjct: 710 LGKIYRDGQGVEKDIQKAVALFTLAATKENSFAAFALGKLYLAGDAALPRDPAAALKWLT 769
Query: 187 RASEKGHAGAAIAYGSLLLRG 207
A+E G+ A G LLL+G
Sbjct: 770 YAAELGNQFAQYRLGKLLLKG 790
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 77 LALEADNSNTHARYWLSKLHLKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRV 134
L A+ N A+Y L KL LK G K + A+ L AA + A+Y L
Sbjct: 768 LTYAAELGNQFAQYRLGKLLLKGD-DGIPKDVITAIRWLTAAAKQENGYAEYALALVYLT 826
Query: 135 ENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHA 194
D + +A ++++ + + A Y LG + L G+ KD+ +A+ A+E+G+
Sbjct: 827 GEDAPKDSVKALSLLKRSAGRGNQFAQYRLGKLLLQGEDAPKDVKAAIRWLTAAAEQGNQ 886
Query: 195 GAAIAYGSLLLRGVQVPE 212
A A G L L G +VP+
Sbjct: 887 YAQYALGKLYLLGKEVPK 904
>gi|420437442|ref|ZP_14936426.1| putative beta-lactamase hcpC [Helicobacter pylori Hp H-28]
gi|393053756|gb|EJB54700.1| putative beta-lactamase hcpC [Helicobacter pylori Hp H-28]
Length = 263
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
A + D + LG RL + V+ D ++AF EKA D + G + LG +Y G V
Sbjct: 32 ACELKDGGGCFNLG-RLYYYGEGVEKDFKKAFALFEKACDLNNGGGCFRLGVLYEYGQGV 90
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+KD+ A + + +A + + G +G L +G V + LTK
Sbjct: 91 EKDLIKAAYFYSKACDLKYGGGCGNFGVLYQKGEGVEKNLTK 132
>gi|449130926|ref|ZP_21767145.1| hypothetical protein HMPREF9724_01810 [Treponema denticola SP37]
gi|448941966|gb|EMB22866.1| hypothetical protein HMPREF9724_01810 [Treponema denticola SP37]
Length = 343
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 41/177 (23%)
Query: 72 KENFELALE-ADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGC 130
KE F L+ A +T A+Y L+K++ K ++AN G+ DAQ+ L C
Sbjct: 128 KEAFHWYLKSAKQGSTDAQYSLAKMYFSGRGCLIDKEQAFYWFKESANQGNKDAQFFLAC 187
Query: 131 ------------RLRVE---------------------------NDYVQSD-QQAFYYIE 150
+L +E D ++ D +QAFY+ E
Sbjct: 188 MYQNGEGSESEPKLALEWFTKSAEQGHDKAQVYLATAYFYGEELGDGLKKDYKQAFYWFE 247
Query: 151 KAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
KA +Q + A LG +Y G+ D A + F +++E+G+A A G + +G
Sbjct: 248 KAAEQNNEIAQNFLGVMYDNGEGTLVDKKKAFYWFKKSAEQGYAYAQFNLGHMYFKG 304
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+A G DAQY L + +QAFY+ +++ +Q + A + L +Y G+ +
Sbjct: 137 SAKQGSTDAQYSLAKMYFSGRGCLIDKEQAFYWFKESANQGNKDAQFFLACMYQNGEGSE 196
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
+ AL F +++E+GH A + + G ++ + L K
Sbjct: 197 SEPKLALEWFTKSAEQGHDKAQVYLATAYFYGEELGDGLKK 237
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQ+ L + + +QA Y+ K+ ++ + A L +Y GD +
Sbjct: 29 AAEQGDAFAQFRLAAMYDKGDGAIVDKKQAVYWYTKSAEKGYDIAQIFLAFMYHRGDGIP 88
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
D A + + +A+E+G+A A + G + G
Sbjct: 89 IDKKQAFYWYSKAAEQGNALAQLVLGGMYESG 120
>gi|423113617|ref|ZP_17101308.1| hypothetical protein HMPREF9689_01365 [Klebsiella oxytoca 10-5245]
gi|376387888|gb|EHT00590.1| hypothetical protein HMPREF9689_01365 [Klebsiella oxytoca 10-5245]
Length = 375
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA PDAQ+ LG N Q QQA + EKA +Q A + LG +Y G+ V
Sbjct: 180 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVN 239
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESN 235
++ F +A+ + A G + G V + K AA + + + N
Sbjct: 240 QNFQQTREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFEKAAGEGHVDAQYN 299
Query: 236 L 236
L
Sbjct: 300 L 300
>gi|416155954|ref|ZP_11604247.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
101P30B1]
gi|416220293|ref|ZP_11625385.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
103P14B1]
gi|416249994|ref|ZP_11637003.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
CO72]
gi|326566881|gb|EGE17020.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
103P14B1]
gi|326575117|gb|EGE25045.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
CO72]
gi|326576797|gb|EGE26704.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
101P30B1]
Length = 302
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
AAN G +AQ+ LG Q +A + KA +Q + GA + L +Y G
Sbjct: 135 FTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQ 194
Query: 173 CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANL 232
V++D A+ + +A+ +GHA A G + G V + K AA + A
Sbjct: 195 GVRQDDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQA 254
Query: 233 ESNL 236
++NL
Sbjct: 255 QNNL 258
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AA G DAQ+ L + + D V+ D +AF + KA +Q A + LG +Y G V
Sbjct: 102 AAKQGYADAQFNLAL-MYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGV 160
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARANLES 234
++D A+ + +A+ +G+AGA + G V + + AA + A +
Sbjct: 161 RQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQY 220
Query: 235 NL----------MNPVEKAKEQFEVA-----AQAGCNLGLRW 261
NL KA E F A AQA NLG+ +
Sbjct: 221 NLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQAQNNLGVMY 262
>gi|26251128|ref|NP_757168.1| hypothetical protein c5321 [Escherichia coli CFT073]
gi|222158994|ref|YP_002559133.1| hypothetical protein LF82_712 [Escherichia coli LF82]
gi|227886724|ref|ZP_04004529.1| Sel1 repeat-containing protein [Escherichia coli 83972]
gi|300987101|ref|ZP_07178008.1| Sel1 repeat protein [Escherichia coli MS 45-1]
gi|331660805|ref|ZP_08361737.1| TPR repeat protein [Escherichia coli TA206]
gi|386632237|ref|YP_006151957.1| hypothetical protein i02_4824 [Escherichia coli str. 'clone D i2']
gi|386637157|ref|YP_006156876.1| hypothetical protein i14_4824 [Escherichia coli str. 'clone D i14']
gi|386641906|ref|YP_006108704.1| hypothetical protein ECABU_c47920 [Escherichia coli ABU 83972]
gi|387619618|ref|YP_006122640.1| hypothetical protein NRG857_21495 [Escherichia coli O83:H1 str. NRG
857C]
gi|419912977|ref|ZP_14431423.1| hypothetical protein ECKD1_07632 [Escherichia coli KD1]
gi|422363684|ref|ZP_16444219.1| Sel1 repeat protein [Escherichia coli MS 153-1]
gi|432409768|ref|ZP_19652456.1| hypothetical protein WG9_00233 [Escherichia coli KTE39]
gi|432430013|ref|ZP_19672464.1| hypothetical protein A13K_00290 [Escherichia coli KTE187]
gi|432434396|ref|ZP_19676810.1| hypothetical protein A13M_00097 [Escherichia coli KTE188]
gi|432454506|ref|ZP_19696721.1| hypothetical protein A15C_00297 [Escherichia coli KTE201]
gi|432493589|ref|ZP_19735411.1| hypothetical protein A173_00739 [Escherichia coli KTE214]
gi|432510015|ref|ZP_19748879.1| hypothetical protein A17E_04272 [Escherichia coli KTE220]
gi|432521991|ref|ZP_19759138.1| hypothetical protein A17Y_00096 [Escherichia coli KTE230]
gi|432566689|ref|ZP_19803223.1| hypothetical protein A1SE_00257 [Escherichia coli KTE53]
gi|432590852|ref|ZP_19827187.1| hypothetical protein A1SS_00253 [Escherichia coli KTE60]
gi|432605715|ref|ZP_19841917.1| hypothetical protein A1U7_00703 [Escherichia coli KTE67]
gi|432649156|ref|ZP_19884927.1| hypothetical protein A1W7_00143 [Escherichia coli KTE87]
gi|432781668|ref|ZP_20015861.1| hypothetical protein A1SY_00478 [Escherichia coli KTE63]
gi|432842114|ref|ZP_20075543.1| hypothetical protein A1YS_00252 [Escherichia coli KTE141]
gi|432976553|ref|ZP_20165381.1| hypothetical protein A15S_02446 [Escherichia coli KTE209]
gi|432993570|ref|ZP_20182193.1| hypothetical protein A17A_00647 [Escherichia coli KTE218]
gi|432997938|ref|ZP_20186512.1| hypothetical protein A17K_00293 [Escherichia coli KTE223]
gi|433060810|ref|ZP_20247829.1| hypothetical protein WIM_04591 [Escherichia coli KTE124]
gi|433090014|ref|ZP_20276361.1| hypothetical protein WIY_04481 [Escherichia coli KTE137]
gi|433118219|ref|ZP_20303987.1| hypothetical protein WKA_04422 [Escherichia coli KTE153]
gi|433127915|ref|ZP_20313444.1| hypothetical protein WKE_04418 [Escherichia coli KTE160]
gi|433141988|ref|ZP_20327214.1| hypothetical protein WKM_04274 [Escherichia coli KTE167]
gi|433151940|ref|ZP_20336925.1| hypothetical protein WKQ_04594 [Escherichia coli KTE174]
gi|433210475|ref|ZP_20394126.1| hypothetical protein WI1_04261 [Escherichia coli KTE97]
gi|433215317|ref|ZP_20398877.1| hypothetical protein WI3_04507 [Escherichia coli KTE99]
gi|442606226|ref|ZP_21021027.1| FIG00639814: hypothetical protein [Escherichia coli Nissle 1917]
gi|345531611|pdb|2XM6|A Chain A, Crystal Structure Of The Protein Corresponding To Locus
C5321 From Cft073 E.Coli Strain
gi|26111560|gb|AAN83742.1|AE016771_253 Putative conserved protein [Escherichia coli CFT073]
gi|222035999|emb|CAP78744.1| hypothetical protein LF82_712 [Escherichia coli LF82]
gi|227836297|gb|EEJ46763.1| Sel1 repeat-containing protein [Escherichia coli 83972]
gi|300407796|gb|EFJ91334.1| Sel1 repeat protein [Escherichia coli MS 45-1]
gi|307556398|gb|ADN49173.1| hypothetical protein ECABU_c47920 [Escherichia coli ABU 83972]
gi|312948879|gb|ADR29706.1| hypothetical protein NRG857_21495 [Escherichia coli O83:H1 str. NRG
857C]
gi|315293587|gb|EFU52939.1| Sel1 repeat protein [Escherichia coli MS 153-1]
gi|331051847|gb|EGI23886.1| TPR repeat protein [Escherichia coli TA206]
gi|355423136|gb|AER87333.1| hypothetical protein i02_4824 [Escherichia coli str. 'clone D i2']
gi|355428056|gb|AER92252.1| hypothetical protein i14_4824 [Escherichia coli str. 'clone D i14']
gi|388390371|gb|EIL51858.1| hypothetical protein ECKD1_07632 [Escherichia coli KD1]
gi|430939260|gb|ELC59476.1| hypothetical protein WG9_00233 [Escherichia coli KTE39]
gi|430957889|gb|ELC76492.1| hypothetical protein A13K_00290 [Escherichia coli KTE187]
gi|430968810|gb|ELC85984.1| hypothetical protein A13M_00097 [Escherichia coli KTE188]
gi|430987179|gb|ELD03726.1| hypothetical protein A15C_00297 [Escherichia coli KTE201]
gi|431029363|gb|ELD42394.1| hypothetical protein A173_00739 [Escherichia coli KTE214]
gi|431034047|gb|ELD45996.1| hypothetical protein A17E_04272 [Escherichia coli KTE220]
gi|431056092|gb|ELD65614.1| hypothetical protein A17Y_00096 [Escherichia coli KTE230]
gi|431103926|gb|ELE08534.1| hypothetical protein A1SE_00257 [Escherichia coli KTE53]
gi|431134410|gb|ELE36361.1| hypothetical protein A1SS_00253 [Escherichia coli KTE60]
gi|431143057|gb|ELE44797.1| hypothetical protein A1U7_00703 [Escherichia coli KTE67]
gi|431195082|gb|ELE94291.1| hypothetical protein A1W7_00143 [Escherichia coli KTE87]
gi|431333064|gb|ELG20280.1| hypothetical protein A1SY_00478 [Escherichia coli KTE63]
gi|431398890|gb|ELG82309.1| hypothetical protein A1YS_00252 [Escherichia coli KTE141]
gi|431484176|gb|ELH63857.1| hypothetical protein A15S_02446 [Escherichia coli KTE209]
gi|431512243|gb|ELH90370.1| hypothetical protein A17A_00647 [Escherichia coli KTE218]
gi|431518007|gb|ELH95528.1| hypothetical protein A17K_00293 [Escherichia coli KTE223]
gi|431564245|gb|ELI37422.1| hypothetical protein WIM_04591 [Escherichia coli KTE124]
gi|431598805|gb|ELI68592.1| hypothetical protein WIY_04481 [Escherichia coli KTE137]
gi|431628029|gb|ELI96406.1| hypothetical protein WKA_04422 [Escherichia coli KTE153]
gi|431638520|gb|ELJ06554.1| hypothetical protein WKE_04418 [Escherichia coli KTE160]
gi|431653962|gb|ELJ21038.1| hypothetical protein WKM_04274 [Escherichia coli KTE167]
gi|431665959|gb|ELJ32667.1| hypothetical protein WKQ_04594 [Escherichia coli KTE174]
gi|431726975|gb|ELJ90739.1| hypothetical protein WI1_04261 [Escherichia coli KTE97]
gi|431730175|gb|ELJ93745.1| hypothetical protein WI3_04507 [Escherichia coli KTE99]
gi|441712831|emb|CCQ07004.1| FIG00639814: hypothetical protein [Escherichia coli Nissle 1917]
Length = 490
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 113 LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGD 172
L A G+ AQ ELG R N+ + QA + +A +Q + A Y+LG Y+ G+
Sbjct: 30 LKQKAESGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGE 89
Query: 173 CVKKDIASALWCFHRASEKG 192
V +D A A+ + +A+ KG
Sbjct: 90 GVPQDYAQAVIWYKKAALKG 109
>gi|402565334|ref|YP_006614679.1| Sel1 domain-containing protein [Burkholderia cepacia GG4]
gi|402246531|gb|AFQ46985.1| Sel1 domain-containing protein [Burkholderia cepacia GG4]
Length = 287
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%)
Query: 111 ALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLT 170
ALL +AA GDP A Y LG R QA ++ E A P A ++L Y
Sbjct: 162 ALLGEAAGQGDPAAAYYLGLIYRSGYGIAADPVQAAHWFEVASQADIPAADFMLANAYRE 221
Query: 171 GDCVKKDIASALWCFHRASE 190
G +D A AL + RA+E
Sbjct: 222 GSGAPRDEARALALYRRAAE 241
>gi|365919644|ref|ZP_09444017.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364578945|gb|EHM56126.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 451
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
++D+QA Y+ EKA Q A Y LG +Y+ G V KD A + F +A+++ A
Sbjct: 46 KNDEQAAYWYEKAAIQGDKQAQYNLGNLYIAGIGVDKDERRAAFWFVQAAQQDDVEAQYN 105
Query: 200 YGSLLLRGVQVPECLTKLNAKRVSAAKKARANLESNLMNPVEKAK---EQFEVAAQ-AGC 255
G+L RG V + + AA++ A + NL E+ + + E+AA+ GC
Sbjct: 106 LGNLYFRGEGVTQDDRRAARWYEKAAQQGYAKAQCNLAMMYERGRGVAQNPEIAAEWYGC 165
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 116 AANMGDPDAQYELGCRLR----VENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
AA G+ DAQY LG +E DY +A Y+ E A +Q H A Y LG +Y G
Sbjct: 355 AARQGNSDAQYNLGVMYENGQGIEQDYA----RAAYWYELAAEQGHARAQYQLGNLYREG 410
Query: 172 DCVKKD--IASALWCFHRASEKG 192
VK+D I A W RA+E+G
Sbjct: 411 LGVKEDPKIMQAWW--QRAAEQG 431
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 127 ELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFH 186
++G R R + + ++ + A + E+A Q + A Y LG +Y G +++D A A + +
Sbjct: 331 DVGYR-RAIDSFNRAARHAAHSFEQAARQGNSDAQYNLGVMYENGQGIEQDYARAAYWYE 389
Query: 187 RASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKA 228
A+E+GHA A G+L G+ V E + A AA++
Sbjct: 390 LAAEQGHARAQYQLGNLYREGLGVKEDPKIMQAWWQRAAEQG 431
>gi|387606144|ref|YP_006095000.1| hypothetical protein EC042_0679 [Escherichia coli 042]
gi|422330914|ref|ZP_16411931.1| hypothetical protein HMPREF0986_00425 [Escherichia coli 4_1_47FAA]
gi|284920444|emb|CBG33505.1| conserved hypothetical protein [Escherichia coli 042]
gi|373248163|gb|EHP67595.1| hypothetical protein HMPREF0986_00425 [Escherichia coli 4_1_47FAA]
Length = 325
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIIGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G +L RG
Sbjct: 68 LGRKYSEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRG 111
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFMKAAE 272
>gi|148826781|ref|YP_001291534.1| Sel1 repeat-containing protein [Haemophilus influenzae PittGG]
gi|148718023|gb|ABQ99150.1| Sel1-like repeat protein [Haemophilus influenzae PittGG]
Length = 254
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVY 168
G L +AA D DAQ+++G + Q++ +A +++KA +Q + +LG +Y
Sbjct: 119 GFKWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLKKAANQNDTESQMILGDMY 178
Query: 169 LTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECL 214
GD VK++ A+ + +A+E ++ A G + G+ V +
Sbjct: 179 YDGDGVKENKTEAIKWYQKAAENNNSRAQAIVGLAYMGGIGVKQNF 224
>gi|410613424|ref|ZP_11324483.1| hypothetical protein GPSY_2760 [Glaciecola psychrophila 170]
gi|410167086|dbj|GAC38372.1| hypothetical protein GPSY_2760 [Glaciecola psychrophila 170]
Length = 671
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA +GD +QY LG + Q+ +QA + +A Q H A +LG +Y G+ V
Sbjct: 510 AAKLGDVSSQYLLGEMYQDAKGTEQNMRQAAAWYTQAAQQGHIKAQAILGFMYSKGNGVN 569
Query: 176 KDIASALWCFHRASEKGHAGAA--IAYGSLLLRGV 208
+D + A + +A+E+GH A +AY L +GV
Sbjct: 570 QDYSQATIWYQKAAEQGHMNAQYNLAYLYSLGQGV 604
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,068,063,491
Number of Sequences: 23463169
Number of extensions: 153407308
Number of successful extensions: 432076
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2634
Number of HSP's successfully gapped in prelim test: 1004
Number of HSP's that attempted gapping in prelim test: 420398
Number of HSP's gapped (non-prelim): 10954
length of query: 282
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 141
effective length of database: 9,050,888,538
effective search space: 1276175283858
effective search space used: 1276175283858
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)