BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023425
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5UP97|YL021_MIMIV Putative sel1-like repeat-containing protein L21 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L21 PE=4 SV=1
Length = 533
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 88 ARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAF 146
+ + L++ +LK +P +A+ LL AAN G +QY LG + E YV +D QA+
Sbjct: 175 SNFMLAETYLKLSIPNFNEAIKNYLL--AANQGCNISQYRLG-MIYFEGKYVNTDMNQAY 231
Query: 147 YYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
+ + + Q + + Y LG VY + D K + A+ CF +++ GH A
Sbjct: 232 KWFKLSAKQGNYFSQYGLGRVYYSMDSTKYNCQKAINCFIKSANCGHIYA 281
>sp|Q9UBV2|SE1L1_HUMAN Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3
Length = 794
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>sp|Q9Z2G6|SE1L1_MOUSE Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=2 SV=2
Length = 790
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 400 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 459
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 460 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 495
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 393 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 449
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 450 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 509
Query: 189 SEKGH 193
S+ GH
Sbjct: 510 SQGGH 514
>sp|Q80Z70|SE1L1_RAT Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2
Length = 794
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G V
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGV 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>sp|Q9ESM7|SE1L1_MESAU Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1
Length = 794
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 116 AANMGDPDAQYELGCRLRVENDYV-QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCV 174
AAN G+ A LG +D V QS++ A +Y +KA D +P LG YL G +
Sbjct: 404 AANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGI 463
Query: 175 KKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
+ + AL F +A+E+G + GS+ G+ V
Sbjct: 464 QVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGV 499
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 71 AKENFELALEADNSNTHARYWLSKLHLKYH--VPGACKAMGAALLVDAANMGDPDAQYEL 128
A + F LA A+ N+HA +L K++ + VP + + AA+MG+P Q L
Sbjct: 397 AFDYFNLA--ANAGNSHAMAFLGKMYSEGSDIVPQSNET-ALHYFKKAADMGNPVGQSGL 453
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
G + A Y +KA +Q LG++Y G VK+D AL F+ A
Sbjct: 454 GMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Query: 189 SEKGH 193
S+ GH
Sbjct: 514 SQGGH 518
>sp|P77234|YBEQ_ECOLI Uncharacterized protein YbeQ OS=Escherichia coli (strain K12)
GN=ybeQ PE=4 SV=2
Length = 325
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 105 CKAMGAALLVDAANMGDPDAQYELGCRLRVENDY-VQSDQQAFYYIEKAVDQLHPGALYL 163
C + +++ A GD +AQY +G ++ D++AFY+++ A +Q H A Y
Sbjct: 8 CDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRG 207
LG Y KD A++ +A+ +GH A+ A G L RG
Sbjct: 68 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRG 111
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 106 KAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLG 165
K + A + +A G+ AQ+++ Q +QA Y+ KA Q GA +G
Sbjct: 188 KTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIG 247
Query: 166 TVYLTGDCVKKDIASALWCFHRASE 190
+Y G V+KD +A F +A+E
Sbjct: 248 YMYKHGQGVEKDYQAAFEWFTKAAE 272
>sp|Q5UP92|YL018_MIMIV Putative sel1-like repeat-containing protein L18 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L18 PE=4 SV=1
Length = 584
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF Y ++A +Q H A Y + Y TG CV +D A+ A+ +G A I +
Sbjct: 225 AFKYYQQAANQNHSSAQYFIAVFYKTGKCVAQDYKKAVHWLTLAASQGLNSAKIKLAEMY 284
Query: 205 LRGVQVPE 212
++G+ V +
Sbjct: 285 MKGIDVEQ 292
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA GD AQY LG ++ Q+A +I K+ DQ + L L Y GD V
Sbjct: 126 AAKTGDSMAQYNLGQMYYRGISTKKNIQKAIKWITKSADQNNKYGLINLARFYEYGDGVL 185
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLL 205
DI A +AS + + A G + +
Sbjct: 186 LDIDKATQLLEQASCQNFSKAQFYLGRIYM 215
>sp|P77296|YBET_ECOLI Uncharacterized protein YbeT OS=Escherichia coli (strain K12)
GN=ybeT PE=4 SV=1
Length = 184
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 102 PGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYVQSD-QQAFYYIEKAVDQLHPGA 160
PG+ AA + A + G +QY LG +D D QA Y+ E++ +Q +P A
Sbjct: 44 PGSLPFTTAATELSAIH-GHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRA 102
Query: 161 LYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQV 210
LG +YL G VK D A+ + A+E+G+A A G + G +
Sbjct: 103 QSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGI 152
>sp|Q3V172|SE1L2_MOUSE Protein sel-1 homolog 2 OS=Mus musculus GN=Sel1l2 PE=2 SV=1
Length = 688
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 97 LKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVD 154
L +H G G AL AA G P+AQ++LG + + + AF Y A
Sbjct: 380 LYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQ 439
Query: 155 QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
P A+Y L +Y TG V + +A+ + E GH
Sbjct: 440 SGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGH 478
>sp|Q5TEA6|SE1L2_HUMAN Protein sel-1 homolog 2 OS=Homo sapiens GN=SEL1L2 PE=1 SV=2
Length = 688
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
AA G PDAQ++LG + + + AF Y A P A+Y L +Y TG V
Sbjct: 401 AAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVV 460
Query: 176 KDIASALWCFHRASEKGH 193
+ +A+ + E GH
Sbjct: 461 RSCRTAVELYKGVCELGH 478
>sp|O25021|HCPE_HELPY Putative beta-lactamase HcpE OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=hcpE PE=3 SV=1
Length = 355
Score = 38.1 bits (87), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 145 AFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLL 204
AF Y++KA + G LG++Y+ G VKKD A F +A + G A + G +
Sbjct: 226 AFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMY 285
Query: 205 LRGVQVPECLTKL--NAKRVSAAKKARANLESNLMNPVEKAKEQFEVAAQAGCNLGLR 260
+G VP+ L K N +R M K KE + GC LG++
Sbjct: 286 SQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMK 343
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 138 YVQSD-QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
YV+ D Q+AF + ++A D + +G +Y GD V KD+ AL + R + G
Sbjct: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMG 309
>sp|P40608|MOTX_VIBPA Sodium-type polar flagellar protein MotX OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=motX PE=4 SV=2
Length = 211
Score = 38.1 bits (87), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%)
Query: 140 QSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 199
Q + YY+E A Q P AL +G Y G V++D A+ A+ G+ A I
Sbjct: 90 QDVELGLYYMENAAQQGLPAALEQIGRYYSRGTLVQQDKERAIPYLREAASMGNLNARIH 149
Query: 200 YGSLLLRGVQVP 211
LLLR P
Sbjct: 150 LAELLLRDYGSP 161
>sp|Q5XI05|SE1L2_RAT Protein sel-1 homolog 2 OS=Rattus norvegicus GN=Sel1l2 PE=2 SV=1
Length = 688
Score = 37.7 bits (86), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 97 LKYHVPGACKAMGAAL--LVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVD 154
L +H G G AL AA G P+AQ+ LG + + + AF Y A
Sbjct: 380 LYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFHLGFMYYSGSGVWKDYKLAFKYFYLASQ 439
Query: 155 QLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKGH 193
P A+Y L +Y TG V + +A+ + E GH
Sbjct: 440 SGQPLAIYYLAEMYATGTGVLRSCRTAVEPYKGVCELGH 478
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 117 ANMGDPDAQYELG-----CRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
A GD Q LG R ++ DY +A YY KA A+ +G +YL G
Sbjct: 292 AERGDVQIQVSLGQLHLIGRKGLDQDY----SKALYYFLKAAKAGSANAMAFIGKMYLEG 347
Query: 172 D-CVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKLNAKRVSAAKKARA 230
+ ++ A+A F A+ KG+A G L G VP + AA+K
Sbjct: 348 NAAAPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWP 407
Query: 231 NLE----------SNLMNPVEKAKEQFEVAAQAGCNLGLRWL 262
N + S + + A + F +A+Q+G L + +L
Sbjct: 408 NAQFHLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYL 449
>sp|Q9DCV6|DELE_MOUSE Death ligand signal enhancer OS=Mus musculus GN=Kiaa0141 PE=2 SV=1
Length = 510
Score = 37.7 bits (86), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
L EN AF Y +KA D+ + A Y +G G +D++ A+ +H A+ +
Sbjct: 252 LGTENIKTGDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAILFYHLAAVQ 311
Query: 192 GHAGAAIAYGSLLLRGVQVPECLTKLNAKR-VSAAKKA 228
GH+ A Y LL Q P L+ +R VS K+A
Sbjct: 312 GHSLAQYRYARCLL---QSPGSLSDPERERAVSLLKQA 346
>sp|P60924|DELE_RAT Death ligand signal enhancer OS=Rattus norvegicus GN=Dele PE=2 SV=1
Length = 509
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
L EN AF Y +KA D+ + A Y +G G +D++ A+ +H A+ +
Sbjct: 252 LGTENIKTGDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAVLFYHLAAVQ 311
Query: 192 GHAGAAIAYGSLLLRGVQVPECLTKLNAKR-VSAAKKA 228
GH+ A Y LL Q P ++ +R VS K+A
Sbjct: 312 GHSLAQYRYARCLL---QSPGSMSDPERQRAVSLLKQA 346
>sp|P44277|Y1625_HAEIN Uncharacterized protein HI_1625 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1625 PE=4 SV=1
Length = 165
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 120 GDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIA 179
G+ AQ LG + V+ ++A+++ +A ++ L LG +YL GD VK++
Sbjct: 64 GNITAQSNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTE 123
Query: 180 SALWCFHRASEKGHAGAAIAYGSL 203
A+ F R ++ A + ++
Sbjct: 124 QAIKLFERTAQAKDTDAMMMLSNI 147
>sp|Q9ZMJ9|HCPE_HELPJ Putative beta-lactamase HcpE OS=Helicobacter pylori (strain J99)
GN=hcpE PE=3 SV=1
Length = 355
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 57 CELNDRRLIPLLKTAKENFELALEADNSNTHAR-YWLSKLHLKYHVPGACKAMGAALLVD 115
C + + +L TA E + LE SN A Y+L L + AC+A+G+ L +
Sbjct: 160 CNFDMAKGCYILGTAYE--KGFLEVKQSNHKAVIYYLKACRL--NEGQACRALGS--LFE 213
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVK 175
+ G D +E+ AF Y++KA + G LG++Y+ G VK
Sbjct: 214 NGDAG-LDEDFEV----------------AFDYLQKACALNNSGGCASLGSMYMLGRYVK 256
Query: 176 KDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTKL--NAKRVSAAKKARANLE 233
KD A F +A + G A + G + +G V + L K N +R
Sbjct: 257 KDPQKAFNYFKQACDMGSAVSCSRMGFMYSQGDTVSKDLRKALDNYERGCDMGDEVGCFA 316
Query: 234 SNLMNPVEKAKEQFEVAAQAGCNLGLR 260
M K KE + GC LG++
Sbjct: 317 LAGMYYNMKDKENAIMIYDKGCKLGMK 343
>sp|Q14154|DELE_HUMAN Death ligand signal enhancer OS=Homo sapiens GN=KIAA0141 PE=1 SV=3
Length = 515
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 132 LRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEK 191
L EN AF Y +KA + + A Y G + G +DI+ A+ + A+ +
Sbjct: 251 LGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQ 310
Query: 192 GHAGAAIAYGSLLLR 206
GH+ A Y LLR
Sbjct: 311 GHSLAQYRYARCLLR 325
>sp|Q68CR1|SE1L3_HUMAN Protein sel-1 homolog 3 OS=Homo sapiens GN=SEL1L3 PE=1 SV=2
Length = 1132
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 36 AMELIAKGWSALKEVDRVIDYCELNDRRLIPLLKT--AKENFELALE----ADNSNTHAR 89
A+E AKG ++ + DY I L K K+N LALE A + H
Sbjct: 713 AIEWYAKGALETEDPALIYDYA-------IVLFKGQGVKKNRRLALELMKKAASKGLHQA 765
Query: 90 YWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDY--VQSDQQ--A 145
++ L YH A A + A MG+PDA Y LG L ++ + V Q A
Sbjct: 766 --VNGLGWYYHKFKKNYAKAAKYWLKAEEMGNPDASYNLGV-LHLDGIFPGVPGRNQTLA 822
Query: 146 FYYIEKAVDQLHPGALYLLGTVYLTGD--CVKKDIASA-LWCFHRASEKGHAGAAIAYG 201
Y KA H Y+TG+ +D A +W H A + G+ G I G
Sbjct: 823 GEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKG 881
>sp|A5PLI4|LR2BP_DANRE LRP2-binding protein OS=Danio rerio GN=lrp2bp PE=2 SV=1
Length = 343
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 80 EADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYELGCRLRVENDYV 139
EA + A Y L + +L+ A + L + AA+ G+P+A + L +
Sbjct: 126 EAGSVRYAALYNLGQAYLEGFGVQASSSEAERLWLLAADNGNPNASVKAQSALGMFYSRP 185
Query: 140 QSD--QQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRASEKG 192
+S ++AF++ +A + LG +YL G V++D SAL+C A+E+G
Sbjct: 186 ESLDLRKAFFWHSQACGNGSLESQAALGLMYLYGHGVQRDSDSALFCLKEAAERG 240
>sp|Q4R3N2|LR2BP_MACFA LRP2-binding protein OS=Macaca fascicularis GN=LRP2BP PE=2 SV=1
Length = 348
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 112 LLVDAANMGDPDA----QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L + AA+ G+P A Q LG L + ++AFY+ +A + + LG +
Sbjct: 160 LWLFAADNGNPKASVKAQSMLG--LYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLM 217
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGA 196
YL G +++D +AL C A+E+G+ A
Sbjct: 218 YLYGQGIRQDTEAALHCLREAAERGNVYA 246
>sp|Q9P2M1|LR2BP_HUMAN LRP2-binding protein OS=Homo sapiens GN=LRP2BP PE=1 SV=2
Length = 347
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 112 LLVDAANMGDPDA----QYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
L + AA+ G+P A Q LG L + ++AFY+ +A + + LG +
Sbjct: 159 LWLIAADNGNPKASVKAQSMLG--LYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLM 216
Query: 168 YLTGDCVKKDIASALWCFHRASEKGHAGA 196
YL G +++D +AL C A+E+G+ A
Sbjct: 217 YLYGQGIRQDTEAALQCLREAAERGNVYA 245
>sp|Q6IND7|LR2BP_XENLA LRP2-binding protein OS=Xenopus laevis GN=lrp2bp PE=2 SV=1
Length = 341
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 164 LGTVYLTGDCVKKDIASALWCFHRASEKGHAGA 196
LG +YL G+ +KK++ +A+ C A+E+G+ A
Sbjct: 210 LGVMYLYGNGIKKNVQAAIECLKEAAERGNVYA 242
>sp|A6ZR53|SHC1_YEAS7 Protein SHC1 OS=Saccharomyces cerevisiae (strain YJM789) GN=SHC1
PE=3 SV=1
Length = 512
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 119 MGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDI 178
+G PDAQY LG +++AF A +LH ++Y Y G V ++
Sbjct: 315 VGYPDAQYLLGDAYSSGVFGKIKNRRAFLLFSAAAKRLHIESVYRTAICYECGLGVTRNA 374
Query: 179 ASALWCFHRASEKGHAGAAIAYGSLLLRGVQ-VP-ECLTKLNAKR 221
A+ A+ K H A G G+ +P + LTK++ R
Sbjct: 375 PKAVNFLTFAATKNHPAAMYKLGVYSYHGLMGLPDDILTKMDGYR 419
>sp|Q9ZG88|PODJ_CAUCR Localization factor PodJL OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=podJ PE=1 SV=2
Length = 974
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTV 167
G LL AAN G P AQ+ L + V+ D +A + E+A + P A++ L
Sbjct: 744 GVELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALY 803
Query: 168 YLTGDCVKKDIASALWCFHRASEKG 192
Y G+ ++ +A F +A++ G
Sbjct: 804 YFKGEGGPRNSTTAASWFRKAADMG 828
>sp|B8GXA0|PODJ_CAUCN Localization factor PodJL OS=Caulobacter crescentus (strain NA1000
/ CB15N) GN=podJ PE=2 SV=1
Length = 974
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 109 GAALLVDAANMGDPDAQYELGCRLRVENDYVQSDQ-QAFYYIEKAVDQLHPGALYLLGTV 167
G LL AAN G P AQ+ L + V+ D +A + E+A + P A++ L
Sbjct: 744 GVELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALY 803
Query: 168 YLTGDCVKKDIASALWCFHRASEKG 192
Y G+ ++ +A F +A++ G
Sbjct: 804 YFKGEGGPRNSTTAASWFRKAADMG 828
>sp|O25001|HCPA_HELPY Beta-lactamase HcpA OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=hcpA PE=1 SV=1
Length = 250
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
LLG +Y G V KD A + +A + HA + GSL GV P+ L K
Sbjct: 102 LLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRK 155
>sp|Q09897|CHR3_SCHPO Chitin synthase regulatory factor 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chr3 PE=1 SV=1
Length = 932
Score = 32.0 bits (71), Expect = 5.6, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 143 QQAFYYIEKAVDQLHPGALYLLGTVYLTGD--CVKKDIASALWCFHRASEKGHAGAAIAY 200
+++ ++ +A +Q + A L YLTG + K+ AL H+A+ KG A A A
Sbjct: 811 RRSIFWYTRAAEQDYGEAELGLSGWYLTGSEGILPKNGEEALLWAHKAACKGLAKAQYAV 870
Query: 201 GSLLLRGVQVPECLTKLNAKRVSAAK----KARANLESNLMN--------PVEKAKEQ 246
G ++ +G+ V + + + AAK KA+ LE ++ P +K +EQ
Sbjct: 871 GFMMEQGIGVAADPSSAHNWYIRAAKQGFPKAKKRLEEQALSSKQTHSKAPKKKQQEQ 928
>sp|Q52822|EXOR_RHILV Exopolysaccharide production negative regulator OS=Rhizobium
leguminosarum bv. viciae GN=exoR PE=4 SV=1
Length = 267
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 116 AANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTV 167
A+ G P+AQ++L + S QQA ++ +A HPGA+ + G +
Sbjct: 155 ASTFGVPEAQFQLAQMMLAGEGGNASPQQAKKWLNQARKSGHPGAMAVFGNI 206
>sp|B7GLS9|COBQ_ANOFW Cobyric acid synthase OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=cobQ PE=3 SV=1
Length = 504
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 34/64 (53%)
Query: 112 LLVDAANMGDPDAQYELGCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTG 171
+ DA+++G+PD G + +E+ Y ++ F I++ ++ + + + G + G
Sbjct: 284 FVSDASSLGEPDILILPGSKNTIEDVYFLTETGLFSSIQRLYERTNVTMIGICGGYQMLG 343
Query: 172 DCVK 175
+C+K
Sbjct: 344 ECIK 347
>sp|Q88NC7|ALGK_PSEPK Alginate biosynthesis protein AlgK OS=Pseudomonas putida (strain
KT2440) GN=algK PE=3 SV=1
Length = 484
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 46/139 (33%), Gaps = 40/139 (28%)
Query: 69 KTAKENFELALEADNSNTHARYWLSKLHLKYHVPGACKAMGAALLVDAANMGDPDAQYEL 128
KTAKE E A+ ++ W+S L Y P +GD D
Sbjct: 266 KTAKELLEQVAPANPAS-----WVSLAQLVYDFP---------------ELGDTD----- 300
Query: 129 GCRLRVENDYVQSDQQAFYYIEKAVDQLHPGALYLLGTVYLTGDCVKKDIASALWCFHRA 188
Q YI+K + P A LLG +Y G + D A A
Sbjct: 301 ---------------QLMAYIDKGREAEQPRAELLLGRLYYEGKTLPADAQKAEQHLQAA 345
Query: 189 SEKGHAGAAIAYGSLLLRG 207
+E G A G L RG
Sbjct: 346 AEAGEISAHYYLGQLYRRG 364
>sp|Q9ZMM1|HCPA_HELPJ Beta-lactamase HcpA OS=Helicobacter pylori (strain J99) GN=hcpA
PE=3 SV=1
Length = 250
Score = 31.2 bits (69), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 25/54 (46%)
Query: 163 LLGTVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLRGVQVPECLTK 216
LLG +Y G V KD A + ++ E HA GSL GV P+ L K
Sbjct: 102 LLGNLYYNGQGVSKDAKKASQYYSKSCELNHAEGCTVLGSLHHYGVGTPKDLRK 155
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,077,474
Number of Sequences: 539616
Number of extensions: 3715971
Number of successful extensions: 9974
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 9907
Number of HSP's gapped (non-prelim): 82
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)