BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023426
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35075|DSCR3_MOUSE Down syndrome critical region protein 3 homolog OS=Mus musculus
GN=Dscr3 PE=2 SV=1
Length = 297
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 138/248 (55%), Gaps = 20/248 (8%)
Query: 36 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESL 95
+T++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+
Sbjct: 3 TTLDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAF 62
Query: 96 YGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYL 155
Y +KPI+I+ + ++ G+I SG TEVPF L G + L YET+HG +NIQY
Sbjct: 63 YNSVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKVL---YETYHGVFVNIQYT 119
Query: 156 VTVDIMRGYLHKSLSATVEFIVET--DKADLLERPVSPEMVVFYIT----QDTQRHPLLP 209
+ D+ R L K L+ T EFIV + K L PV F IT Q+ + LP
Sbjct: 120 LRCDMRRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVD-----FTITPETLQNVKERASLP 174
Query: 210 ELKSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISET 268
+ F + G + ST C++ P+TGEL VE S I SI++ L+R+E+ E +
Sbjct: 175 K-----FFIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDA 229
Query: 269 SLIQTTQM 276
+ IQ Q+
Sbjct: 230 TEIQNIQI 237
>sp|Q5RF33|DSCR3_PONAB Down syndrome critical region protein 3 homolog OS=Pongo abelii
GN=DSCR3 PE=2 SV=1
Length = 297
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 137/246 (55%), Gaps = 16/246 (6%)
Query: 36 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESL 95
+ ++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+
Sbjct: 3 TALDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAF 62
Query: 96 YGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYL 155
Y +KPI+I+ + E+ G+ SG TE+PF L G + L YET+HG +NIQY
Sbjct: 63 YNSVKPIQIINSNIEMVKPGKFPSGKTEIPFEFPLHVKGNKVL---YETYHGVFVNIQYT 119
Query: 156 VTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYIT----QDTQRHPLLPEL 211
+ D+ R L K L+ T EFIV + + SP V F IT Q+ + LLP+
Sbjct: 120 LRCDMKRSLLAKDLTKTCEFIVHSAPQ---KGKFSPSPVHFTITPETLQNARERALLPK- 175
Query: 212 KSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSL 270
F + G + ST C + P+TGEL VE+S I S+++ L+R+E+ E + +
Sbjct: 176 ----FLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATE 231
Query: 271 IQTTQM 276
IQ Q+
Sbjct: 232 IQNIQI 237
>sp|O14972|DSCR3_HUMAN Down syndrome critical region protein 3 OS=Homo sapiens GN=DSCR3
PE=2 SV=1
Length = 297
Score = 154 bits (389), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 137/246 (55%), Gaps = 16/246 (6%)
Query: 36 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESL 95
+ ++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+
Sbjct: 3 TALDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAF 62
Query: 96 YGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYL 155
Y +KPI+I+ + E+ G+ SG TE+PF L G + L YET+HG +NIQY
Sbjct: 63 YNSVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKVL---YETYHGVFVNIQYT 119
Query: 156 VTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYIT----QDTQRHPLLPEL 211
+ D+ R L K L+ T EFIV + + +P V F IT Q+ + LLP+
Sbjct: 120 LRCDMKRSLLAKDLTKTCEFIVHSAPQ---KGKFTPSPVDFTITPETLQNVKERALLPK- 175
Query: 212 KSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSL 270
F + G + ST C + P+TGEL VE+S I S+++ L+R+E+ E + +
Sbjct: 176 ----FLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATE 231
Query: 271 IQTTQM 276
IQ Q+
Sbjct: 232 IQNIQI 237
>sp|Q54DI8|DSCR3_DICDI Down syndrome critical region protein 3 homolog OS=Dictyostelium
discoideum GN=DDB_G0292212 PE=3 SV=1
Length = 304
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 133/246 (54%), Gaps = 8/246 (3%)
Query: 36 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESL 95
+ +++KL + ++IYRP + G +VI S + H G+ + V G+ LQ+ S G+ E+
Sbjct: 3 NVLDLKLKKIDKIYRPGSKVSGNVVINSKDDMSHSGVTIVVEGTVQLQLSSKSVGLFEAF 62
Query: 96 YGVIKPIKILKKSQEIRT-SGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQY 154
Y +KPI ++ + + G+ +G TE+PF L+ + L Y+T+HG +NIQY
Sbjct: 63 YNSLKPITLMHYTISVTNGGGKFQAGITELPFEFTLEPLPNQQL---YDTYHGVFVNIQY 119
Query: 155 LVTVDIMRGYLHKSLSATVEFIVE--TDKADLLERPVSPEMVVFYITQDTQ-RHPLLPEL 211
+ D+ RG L K LS T+EFIVE + ++L + ++ F IT D+ + +
Sbjct: 120 SIKCDVKRGILSKDLSKTIEFIVEVPSQNKEVLMKSTPESLITFNITPDSLVNFKKISKA 179
Query: 212 KSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSL 270
FK++G + S C++ + G + +E++ I S+++ L+R+E+ + E +
Sbjct: 180 DVPTFKISGGLVSAICNINEAFQGHMIIESADTVIKSVELQLVRVETCGCADGYAREVTE 239
Query: 271 IQTTQM 276
IQ Q+
Sbjct: 240 IQNIQI 245
>sp|Q99KN1|ARRD1_MOUSE Arrestin domain-containing protein 1 OS=Mus musculus GN=Arrdc1 PE=2
SV=2
Length = 434
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 9/102 (8%)
Query: 39 EIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGS-AGVVESLYG 97
EI+LS+ +Y P EPL G + ++ + + I +T GS + + A VVE Y
Sbjct: 8 EIRLSQGRVVYGPGEPLAGTVHLRLGAPLPFRAIRVTCMGSCGVSTKANDGAWVVEESY- 66
Query: 98 VIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLE 139
S + G + +G PF L + E
Sbjct: 67 -------FNSSLSLADKGSLPAGEHNFPFQFLLPATAPTSFE 101
>sp|Q96450|1433A_SOYBN 14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1
Length = 257
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 151 NIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPE 210
N ++ + RG + LS + I+ +++L+ SPE VFY+ H L E
Sbjct: 79 NEDHVAIIKEYRGKIEAELSKICDGILNLLESNLIPSAASPESKVFYLKMKGDYHRYLAE 138
Query: 211 LKSGGFKVTGKMSTQCSLLDPITGELTVEASSVPIHSIDIHL 252
K+G + K + + +LL + + A P H I + L
Sbjct: 139 FKTGAER---KEAAESTLLAYKSAQDIALADLAPTHPIRLGL 177
>sp|Q8I4T1|VPS26_PLAF7 Vacuolar protein sorting-associated protein 26 OS=Plasmodium
falciparum (isolate 3D7) GN=PFL2415w PE=3 SV=1
Length = 297
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 23/134 (17%)
Query: 48 IYRPSEPLQGK--IVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKIL 105
I+ E + G I +K HYGI L + G N+ ++ S+ ++P L
Sbjct: 38 IFSDGEDINGTATISLKPGKKFEHYGIKLELIGQINILNDKANSYDFFSISKDLEPPGFL 97
Query: 106 KKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYL 165
+S++ + FS KQH E++ G ++ ++Y V ++I++GY
Sbjct: 98 VESKQFKWK-----------FSAVDKQH---------ESYFGTNVQLRYFVRLNIIKGY- 136
Query: 166 HKSLSATVEFIVET 179
++ ++FIV+
Sbjct: 137 SGNIQKEIDFIVQN 150
>sp|Q8N5I2|ARRD1_HUMAN Arrestin domain-containing protein 1 OS=Homo sapiens GN=ARRDC1 PE=2
SV=1
Length = 433
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 39 EIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGG-SAGVVESLYG 97
EI LS +Y P EPL G + ++ + + I +T GS + + +A VVE Y
Sbjct: 8 EISLSHGRVVYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVSNKANDTAWVVEEGY- 66
Query: 98 VIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLE 139
S + G + +G PF L + E
Sbjct: 67 -------FNSSLSLADKGSLPAGEHSFPFQFLLPATAPTSFE 101
>sp|Q9SP07|1433_LILLO 14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1
Length = 259
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 151 NIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPE 210
N ++ + RG + LS + I++ + L+ +PE VFY+ H L E
Sbjct: 81 NEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAE 140
Query: 211 LKSGGFKVTGKMSTQCSLLDPITGELTVEASSVPIHSIDIHL 252
KSG + K + + +LL + + A P H I + L
Sbjct: 141 FKSGAER---KEAAESTLLAYKSAQDIALAELAPTHPIRLGL 179
>sp|I0CME7|HYAL_CONCN Hyaluronidase conohyal-Cn1 OS=Conus consors PE=1 SV=1
Length = 448
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 51 PSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIK 103
P+ P+ ++ ++ +IFHY HL + S L + G+AGVV L+G K K
Sbjct: 288 PNTPIYPYVMFQTMDNIFHYEDHLKI--SLGLSAKMGAAGVV--LWGTSKHYK 336
>sp|Q9FJD0|VP26A_ARATH Vacuolar protein sorting-associated protein 26A OS=Arabidopsis
thaliana GN=VPS26A PE=2 SV=1
Length = 302
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%)
Query: 46 NRIYRPSEPLQGKIVIK--SSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIK 103
N +++ E + GKI I+ + H G+ + + G + G+ SL
Sbjct: 39 NPLFQSQETIAGKINIEPYQGKKVEHNGVKVELLGQIEMYFDRGNFYDFTSL-------- 90
Query: 104 ILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRG 163
+EI G I T PF + ++E YET++G ++ ++Y++ V + RG
Sbjct: 91 ----VREIDVPGEIYERKT-YPFEFS-------SVEMPYETYNGVNVRLRYVLKVTVTRG 138
Query: 164 Y 164
Y
Sbjct: 139 Y 139
>sp|Q55CA0|VPS26_DICDI Vacuolar protein sorting-associated protein 26 OS=Dictyostelium
discoideum GN=vps26 PE=2 SV=1
Length = 349
Score = 31.2 bits (69), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 23/116 (19%)
Query: 52 SEPLQGKIVI---KSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKS 108
+EP+ GK+ I + + I H GI + G L G+ SL
Sbjct: 45 NEPVSGKVSINIKEKTKKIEHTGIRVEFVGQIELFYDRGNHYEFTSL------------- 91
Query: 109 QEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGY 164
+R G T FS + N+E+ YE+++G ++ ++Y V + I R +
Sbjct: 92 --VRELAPAGELTENKTFSYDFS-----NVEKQYESYNGTNVRLRYFVRLTIGRSF 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,263,230
Number of Sequences: 539616
Number of extensions: 3830523
Number of successful extensions: 9046
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 9029
Number of HSP's gapped (non-prelim): 21
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)