Query 023426
Match_columns 282
No_of_seqs 140 out of 367
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 06:36:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023426.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023426hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fau_A Vacuolar protein sortin 100.0 7.9E-51 2.7E-55 383.6 26.8 195 48-281 43-242 (341)
2 2r51_A Vacuolar protein sortin 100.0 6.6E-50 2.2E-54 377.4 28.3 207 37-281 28-242 (340)
3 1g4m_A Beta-arrestin1; sensory 99.7 1.3E-16 4.6E-21 153.1 16.8 196 37-257 17-240 (393)
4 1suj_A CONE arrestin; sensory 99.6 2.8E-14 9.7E-19 136.6 17.8 200 38-259 17-239 (392)
5 3ugu_A S-arrestin; arrestin fo 99.1 1.3E-08 4.6E-13 96.5 22.0 199 38-260 32-259 (380)
6 1g4m_A Beta-arrestin1; sensory 96.9 0.034 1.2E-06 53.0 16.0 127 37-180 198-354 (393)
7 2r51_A Vacuolar protein sortin 96.5 0.066 2.3E-06 50.1 14.9 121 38-179 176-298 (340)
8 2fau_A Vacuolar protein sortin 96.4 0.031 1.1E-06 52.4 12.2 120 38-179 176-298 (341)
9 1suj_A CONE arrestin; sensory 96.4 0.085 2.9E-06 50.4 15.2 124 38-178 196-349 (392)
10 3ugu_A S-arrestin; arrestin fo 90.0 9.4 0.00032 36.1 15.1 44 38-83 215-258 (380)
11 2hr0_A Complement C3 beta chai 81.2 44 0.0015 32.9 17.4 84 123-239 166-250 (645)
12 3hrz_A Cobra venom factor; ser 77.3 48 0.0017 32.9 14.7 157 38-281 106-268 (627)
13 2pn5_A TEP1R, thioester-contai 75.3 83 0.0029 33.8 16.8 26 38-65 102-127 (1325)
14 4fxk_A Complement C4 beta chai 73.4 40 0.0014 32.8 12.8 90 118-240 175-265 (656)
15 2p9r_A Alpha-2-M, alpha-2-macr 58.6 17 0.00058 26.9 5.3 25 38-64 4-28 (102)
16 3cu7_A Complement C5; Mg domai 57.8 70 0.0024 35.4 12.0 40 123-180 182-222 (1676)
17 3prx_B Cobra venom factor; imm 52.1 1.6E+02 0.0054 32.9 13.6 83 124-240 182-265 (1642)
18 4acq_A Alpha-2-macroglobulin; 49.2 1.3E+02 0.0043 33.1 12.2 84 124-243 165-248 (1451)
19 2b39_A C3; thioester, immune d 42.6 2.2E+02 0.0076 31.4 12.9 23 40-64 131-153 (1661)
20 3idu_A Uncharacterized protein 36.6 1.5E+02 0.0052 23.2 9.3 43 30-76 14-56 (127)
21 3njn_A Peptidase; structural g 35.7 32 0.0011 27.2 3.5 44 36-79 14-66 (119)
22 2zou_A Spondin-1; beta-sandwic 30.8 94 0.0032 24.9 5.8 44 32-77 18-61 (149)
23 1g0d_A Protein-glutamine gamma 22.0 4.7E+02 0.016 26.5 10.1 115 38-182 473-587 (695)
No 1
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.9e-51 Score=383.62 Aligned_cols=195 Identities=18% Similarity=0.302 Sum_probs=176.7
Q ss_pred CcCCCCcEeEEEEEEeCC---ceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeEEeeCCcccCCCceEe
Q 023426 48 IYRPSEPLQGKIVIKSSS---SIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRIGSGTTEV 124 (282)
Q Consensus 48 vY~~GE~VsG~V~i~~~~---~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~la~~G~Lp~G~~~f 124 (282)
+|++||+|+|+|+|++++ +++|+||+|++.|++++.|+ +.++++|++.+.+|+++|+|++| |+|
T Consensus 43 vY~~GE~VsG~V~I~~~~~gk~l~h~GIki~~~G~~e~~~~------------~~~~~~fls~~~eL~~~G~L~~g-~~f 109 (341)
T 2fau_A 43 LFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELFND------------KSNTHEFVNLVKELALPGELTQS-RSY 109 (341)
T ss_dssp EECTTCCEEEEEEEEESSSSCCEEESCEEEEEEEEEEECST------------TCCEEEEEEEEEEEECSEEECSC-EEE
T ss_pred cCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEEEEEEEec------------CCCcEEEEEEEEEEcCCCccCCC-cEE
Confidence 899999999999999986 89999999999999888764 34558899999999999999999 999
Q ss_pred eeEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEEecCcccccCCCCCceeEEEecc-ccc
Q 023426 125 PFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQ-DTQ 203 (282)
Q Consensus 125 PF~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~~~~dl~~~p~~~~pv~f~I~~-dtl 203 (282)
||+|++|++ +||||+|+||+|||+|||+|+|||+ |++++++|||+... ..|..+.|++|++++ |||
T Consensus 110 pF~F~~~~~-------~~eSy~G~~~~IrY~vrv~i~R~~~--di~~~~eF~V~~~~----~~p~~~~pi~~evgied~L 176 (341)
T 2fau_A 110 DFEFMQVEK-------PYESYIGANVRLRYFLKVTIVRRLT--DLVKEYDLIVHQLA----TYPDVNNSIKMEVGIEDXL 176 (341)
T ss_dssp EEEECSCCC-------CSCCEECSSEEEEEEEEEEECCSSS--CEEEEEEEEECCCB----CCCCCCCCEEEEEEETTTE
T ss_pred eeEeCCCCC-------CCcceEeeEEEEEEEEEEEEEecCc--ceeEEEEEEEEeCC----CCCCCCCCeEEEEeccccE
Confidence 999999854 9999999999999999999999995 89999999996632 346677899999998 665
Q ss_pred CCCccCCccccceEEEEEE-eccccCCCceEEEEEEEEecCCeeEEEEEEEEEEEEEeCCceeeeeeeEEEEEeecccc
Q 023426 204 RHPLLPELKSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQMEMSVA 281 (282)
Q Consensus 204 ~~~~i~~~~~~~F~i~g~~-k~~~~l~d~i~G~i~~~~s~i~Ik~iElqLiR~Et~g~~~~~~~e~teiq~iqI~dg~~ 281 (282)
++++.+ ++.|+++|+|+|+|+|++|+++||+||++|+|+|||++++++.+|+++||++|||||..
T Consensus 177 -------------~ieF~~~ks~y~l~d~I~G~I~f~~s~i~Ik~iel~LiR~Et~~~~~~~~~e~~~i~k~eImDG~p 242 (341)
T 2fau_A 177 -------------HIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAP 242 (341)
T ss_dssp -------------EEEEEESCSEEETTCEEEEEEEEEEECSCEEEEEEEEEEEEEESCGGGCEEEEEEEEEEECCCC--
T ss_pred -------------EEEEEEccccccCCCeEEEEEEEEEeccceEEEEEEEEEEEEEcCCCCeeeEEEEEEEEEEeCCCc
Confidence 566677 89999999999999999999999999999999999999999999999999999999973
No 2
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=100.00 E-value=6.6e-50 Score=377.41 Aligned_cols=207 Identities=15% Similarity=0.294 Sum_probs=179.7
Q ss_pred EEEEEECCCCC----CcCCCCcEeEEEEEEeC---CceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeE
Q 023426 37 TVEIKLSRSNR----IYRPSEPLQGKIVIKSS---SSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQ 109 (282)
Q Consensus 37 ~~~I~fd~~~~----vY~~GE~VsG~V~i~~~---~~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~ 109 (282)
.+++..++..+ +|++||+|+|+|+|+++ ++++|+||+|+++|++++.|+. .++++|++...
T Consensus 28 ~~~~~~~~~~~~~~pvY~~GE~VsG~V~I~~~~~~k~l~h~GIki~~~G~~e~~~~~------------~~~~~f~~~~~ 95 (340)
T 2r51_A 28 RAEHKTEDGKKEKYFLFYDGETVSGKVSLSLKNPNKRLEHQGIKIEFIGQIELYYDR------------GNHHEFVSLVK 95 (340)
T ss_dssp EEEEECTTSCEEEEEEEETBCCEEEEEEEEESSTTSCEEESCEEEEEEEEEEEGGGT------------TCCEEEEEEEE
T ss_pred eEEeecCCCcEeecCcCCCCCEEEEEEEEEECCCCCeeEEEEEEEEEEEEEEEEecC------------CCcEEEEEEEE
Confidence 35555554333 89999999999999999 8999999999999998886653 45588999999
Q ss_pred EeeCCcccCCCceEeeeEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEEecCcccccCCC
Q 023426 110 EIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPV 189 (282)
Q Consensus 110 ~la~~G~Lp~G~~~fPF~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~~~~dl~~~p~ 189 (282)
+|+++|+|++|+| |||+|+||++ +||||+|+||+|||+|||+|+|||+ |++++++|||+... ..|+
T Consensus 96 eL~~pG~L~~G~~-fpF~F~lp~~-------l~eSy~G~~g~IrY~vkv~i~Rp~~--di~~~~eF~V~~~~----~~p~ 161 (340)
T 2r51_A 96 DLARPGEITQSQA-FDFEFTHVEK-------PYESYTGQNVKLRYFLRATISRRLN--DVVKEMDIVVHTLS----TYPE 161 (340)
T ss_dssp EEECSEEECSCEE-EEEEECSBCC-------CSCCEECSSEEEEEEEEEEECCSSC--CEEEEEEEEEECCC----CCCC
T ss_pred EecCCCccCCCcE-EeeEeCCCCC-------CCcCeEeeeEEEEEEEEEEEEecCC--CceEEEEEEEEeCC----CCCc
Confidence 9999999999999 9999999965 8999999999999999999999995 89999999997643 2344
Q ss_pred CCceeEEEecccccCCCccCCccccceEEEEEE-eccccCCCceEEEEEEEEecCCeeEEEEEEEEEEEEEeCCceeeee
Q 023426 190 SPEMVVFYITQDTQRHPLLPELKSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISET 268 (282)
Q Consensus 190 ~~~pv~f~I~~dtl~~~~i~~~~~~~F~i~g~~-k~~~~l~d~i~G~i~~~~s~i~Ik~iElqLiR~Et~g~~~~~~~e~ 268 (282)
.+.|++++++.+ ..|+|+|++ ++.|+++|+|+|+|+|++|+++||+||++|+|+|||++++++++|+
T Consensus 162 ~~~pIk~Evgi~------------~cl~Ie~~~~ks~y~lgd~I~G~I~f~~s~i~Ik~iel~LiR~Et~~~~~~~~~e~ 229 (340)
T 2r51_A 162 LNSSIKMEVGIE------------DCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHEN 229 (340)
T ss_dssp CCCCEEEEEEET------------TTEEEEEEESCSEEETTCEEEEEEEEEEECSCEEEEEEEEEEEEEEEETTEEEEEE
T ss_pred cCCCEeccccCC------------ceEEEEEEECcccccCCCeEEEEEEEEEeeceeEEEEEEEEEEEEEecCCCeeEEE
Confidence 455555554321 127999999 8999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeecccc
Q 023426 269 SLIQTTQMEMSVA 281 (282)
Q Consensus 269 teiq~iqI~dg~~ 281 (282)
++||++|||||..
T Consensus 230 ~~i~k~eImdG~p 242 (340)
T 2r51_A 230 DTIAKYEIMDGAP 242 (340)
T ss_dssp EEEEEEEEEESCC
T ss_pred EEEEEEEEecCCc
Confidence 9999999999963
No 3
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=99.71 E-value=1.3e-16 Score=153.08 Aligned_cols=196 Identities=12% Similarity=0.144 Sum_probs=128.2
Q ss_pred EEEEEECCCCC--CcCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEEEecC--cceeEEEeecceecEEEeeeeEEee
Q 023426 37 TVEIKLSRSNR--IYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGG--SAGVVESLYGVIKPIKILKKSQEIR 112 (282)
Q Consensus 37 ~~~I~fd~~~~--vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~~~~~--~~g~~e~~~~~~~~~~~~~~~~~la 112 (282)
.++|.|.+-+= .|..+|.|+|+|.|++. +++++.|.+++.+...- +.+. -.|. .|. + ..|+....-+.
T Consensus 17 ~i~~yl~krdfvd~~~~~d~V~GvV~id~~-~lk~r~v~v~l~~~fry-gr~~~~v~g~--~f~---k-e~~~~~~~v~p 88 (393)
T 1g4m_A 17 KLTVYLGKRDFVDHIDLVEPVDGVVLVDPE-YLKERRVYVTLTCAFRY-GREDLDVLGL--TFR---K-DLFVANVQSFP 88 (393)
T ss_dssp SCEEEESCSEEEECSSCBCCEEEEEECCHH-HHTTCEEEEEEEEEEEE-SCTTCCCTTT--CEE---E-EEEEEEEEEES
T ss_pred eEEEEeCCceEEEecCCCCEEEEEEEEehh-HhcccEEEEEEEEEEEe-cCCcceeccc--ccc---e-eEEEEEEEEeC
Confidence 38888876442 46789999999999988 99999997777653211 1111 0110 011 1 11222222223
Q ss_pred CCc--ccC-----------CCceEeeeEEEcCCCCCcccccccceEE--------eeeeEEEEEEEEEEEecccCCCceE
Q 023426 113 TSG--RIG-----------SGTTEVPFSMNLKQHGEENLERFYETFH--------GADINIQYLVTVDIMRGYLHKSLSA 171 (282)
Q Consensus 113 ~~G--~Lp-----------~G~~~fPF~F~Lp~~~~~~~~~l~ESy~--------G~~g~vrY~vkv~i~Rp~~~~d~~~ 171 (282)
+++ +.| +|.|.|||+|+||.++ +.||+ |++|+|||.|+|.++||+. +...
T Consensus 89 ~~~~~~~~lt~lqe~l~~~~G~h~fPF~f~LP~~l-------PsSfelq~~~~d~G~~g~IrY~Vka~i~~~~~--~k~~ 159 (393)
T 1g4m_A 89 PAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNL-------PCSVTLQPGPEDTGKACGVDYEVKAFCAENLE--EKIH 159 (393)
T ss_dssp CSTTSCCCCCHHHHHHHHHSCTTEEEEEECCCTTS-------CCCEEEECCGGGGGGCEEEEEEEEEEEESSTT--SCCC
T ss_pred CCCcccCccchhhhhhhccCCceEEEEEeeCCCCC-------CceEEEccccccCCCcEEEEEEEEEEEcCCcc--cccc
Confidence 333 233 9999999999999874 46998 9999999999999999963 3333
Q ss_pred EEEEEEEecCcccccCCCCC-ceeEEEecccccCCCccCCccccceEEEEEE-eccccCCCceEEEEEEE-EecCCeeEE
Q 023426 172 TVEFIVETDKADLLERPVSP-EMVVFYITQDTQRHPLLPELKSGGFKVTGKM-STQCSLLDPITGELTVE-ASSVPIHSI 248 (282)
Q Consensus 172 ~~eF~V~~~~~dl~~~p~~~-~pv~f~I~~dtl~~~~i~~~~~~~F~i~g~~-k~~~~l~d~i~G~i~~~-~s~i~Ik~i 248 (282)
+..|++ ....+++..|... .+...+..+... +..+..+++..+ ++.|..+|.|.-.+.++ .|+..|+.|
T Consensus 160 K~~~v~-l~i~~l~~~p~~~~~~~~~e~~k~fc-------~~sG~l~l~~sldk~~Y~pGE~I~v~v~I~N~S~k~Vk~I 231 (393)
T 1g4m_A 160 KRNSVR-LVIRKVQYAPERPGPQPTAETTRQFL-------MSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKI 231 (393)
T ss_dssp GGGEEE-EEEEEEECCCCCCSSCCCCEEEEECB-------SSSSCEEEEEEESCSEEETTCCEEEEEEEEECSSCCEEEE
T ss_pred eEEEEE-EeccccccCchhhcCCCceEEEEEEE-------EcCCCEEEEEEECCceEcCCCEEEEEEEEEcCCCCEEeEE
Confidence 333333 2122333333221 122223333211 234567899999 88899999999888888 889999999
Q ss_pred EEEEEEEEE
Q 023426 249 DIHLLRMES 257 (282)
Q Consensus 249 ElqLiR~Et 257 (282)
++.|+|..+
T Consensus 232 kv~L~Q~~~ 240 (393)
T 1g4m_A 232 KISVRQYAD 240 (393)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 999999884
No 4
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=99.60 E-value=2.8e-14 Score=136.61 Aligned_cols=200 Identities=11% Similarity=0.116 Sum_probs=124.4
Q ss_pred EEEEECCCCC--CcCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeee--eEEeeC
Q 023426 38 VEIKLSRSNR--IYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKK--SQEIRT 113 (282)
Q Consensus 38 ~~I~fd~~~~--vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~--~~~la~ 113 (282)
+++.+-+-+= -....|.|.|.|+|+... ++.|.|.+.|.+.-. +.+......-..|. .+++.. .++-..
T Consensus 17 ~t~yl~krd~vd~~~~vd~vdGvV~vd~~~-lk~rkv~~~l~~~fr--yGred~~v~Gl~f~----kel~~~~~qv~p~~ 89 (392)
T 1suj_A 17 LSIYLGKRDFVDHVEHVEPVDGVVLIDPEY-LKDRKVFVTLTCAFR--YGRDDLDLIGMSFR----KDLYSLATQVYPPE 89 (392)
T ss_dssp EEEEESCSEEEECSSCBCCEEEEEEECTTT-SSSCEEEEEEEEEEE--EECCSSCCSSCEEE----EEEEEEEEEEESCC
T ss_pred EEEEECCceEEeecCccCceeeEEEEcHHH-hccceEEEEEEEeec--cCCCchhcCcceEE----EEEEEEEEEEeCCC
Confidence 6666643211 245689999999999776 999999999985421 22111000000111 122222 222222
Q ss_pred Cc-cc---------CCCceEeeeEEEcCCCCCccccccc-----ceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEE
Q 023426 114 SG-RI---------GSGTTEVPFSMNLKQHGEENLERFY-----ETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVE 178 (282)
Q Consensus 114 ~G-~L---------p~G~~~fPF~F~Lp~~~~~~~~~l~-----ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~ 178 (282)
++ .+ +.|.|.|||.|+||.+||| .+ .+|+|++++|||.|||.++|||..+ ..+. +.|.
T Consensus 90 ~~~~~t~lQe~Ll~~~G~h~fPFsFqLP~~lPs----Sf~lqp~~~~eGk~g~VrY~VKa~i~~~~~dk--~~Kr-~tv~ 162 (392)
T 1suj_A 90 TKEPLTPLQEKLMKKLGAHAYPFCFKMGTNLPC----SVTLQPGPDDTGKSCGVDFEVKAFCAENLEEK--IHKR-NSVQ 162 (392)
T ss_dssp SCCCCCHHHHHHHHHHCSSEEEEEECCCSSCCC----CEEECCCTTCCSCCEEEEEEEEEEEESCTTSC--CCGG-GEEE
T ss_pred CCccccHHHHHhhhcccCeeEeEEeeCCCCCCC----eEEeccCCccCCCceeEEEEEEEEEcCChhhc--cceE-EEEE
Confidence 22 12 7899999999999998664 22 2447999999999999999998422 1111 2221
Q ss_pred ecCcccccCCCCC--ceeEEEecccccCCCccCCccccceEEEEEE-eccccCCCceEEEEEEE-EecCCeeEEEEEEEE
Q 023426 179 TDKADLLERPVSP--EMVVFYITQDTQRHPLLPELKSGGFKVTGKM-STQCSLLDPITGELTVE-ASSVPIHSIDIHLLR 254 (282)
Q Consensus 179 ~~~~dl~~~p~~~--~pv~f~I~~dtl~~~~i~~~~~~~F~i~g~~-k~~~~l~d~i~G~i~~~-~s~i~Ik~iElqLiR 254 (282)
....+++..|... .| ..+..+..+ +..+..+++..+ +..|..+|+|.-.+.+. .|+..|+.|.+.|++
T Consensus 163 l~ir~l~~~P~~~~~~p-~~e~~k~f~-------~ssGpl~l~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q 234 (392)
T 1suj_A 163 LVIRKVQFAPANLGVAP-KTEITRQFM-------LSDRPLHLEASLDKEIYYHGEPINVNVKINNTTGKIVKKIKIIVEQ 234 (392)
T ss_dssp EEEEEEECCCSSCCCCC-CCEEEEEEE-------ETTEEEEEEEEESCSEEETTCCEEEEEEEEECSSSEEEEEEEEEEE
T ss_pred EeeeccccCccccCCCC-eeEEEEEeE-------ecCCCEEEEEEeCCccccCCCEEEEEEEEECCCCCcEeEEEEEEEE
Confidence 1122333333221 12 112222111 234567899999 88899999999888888 889999999999999
Q ss_pred EEEEE
Q 023426 255 MESIL 259 (282)
Q Consensus 255 ~Et~g 259 (282)
.-++-
T Consensus 235 ~~~v~ 239 (392)
T 1suj_A 235 VTDVV 239 (392)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99863
No 5
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=99.10 E-value=1.3e-08 Score=96.49 Aligned_cols=199 Identities=10% Similarity=0.136 Sum_probs=116.8
Q ss_pred EEEEECCCCCC--cCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeEEeeCCc
Q 023426 38 VEIKLSRSNRI--YRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSG 115 (282)
Q Consensus 38 ~~I~fd~~~~v--Y~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~la~~G 115 (282)
+++.+-+-+=+ ...=|.|.|.|.|... -++-|-|-+.+...- .+.+......-.-|. -+++-...++-|+.
T Consensus 32 lt~YlgkRdfvdh~~~vdpvdGvv~vd~~-~~~~rkvf~~l~~~f--RYGred~dV~Gl~F~----kdl~~~~~qvyP~~ 104 (380)
T 3ugu_A 32 VTIYLGKRDYIDHVERVEPVDGVVLVDPE-LVKGKRVYVSLTCAF--RYGQEDIDVMGLSFR----RDLYFSQVQVFPPV 104 (380)
T ss_dssp EEEEESCSEEEECSSCBCCEEEEEEECHH-HHTTCEEEEEEEEEE--EECC------CCCEE----EEEEEEEEEEESCC
T ss_pred EEEEecCceEEeecCcccccceEEEECHH-HhCCCEEEEEEEEEE--ecCCCccccccchhh----hhhhheeEEecCCC
Confidence 66666442211 1234889999999843 445566666655432 222211111100111 12222222332332
Q ss_pred -------ccC------CCceEeeeEEEcCCCCCcccccccceE--------EeeeeEEEEEEEEEEEecc---cCCCceE
Q 023426 116 -------RIG------SGTTEVPFSMNLKQHGEENLERFYETF--------HGADINIQYLVTVDIMRGY---LHKSLSA 171 (282)
Q Consensus 116 -------~Lp------~G~~~fPF~F~Lp~~~~~~~~~l~ESy--------~G~~g~vrY~vkv~i~Rp~---~~~d~~~ 171 (282)
.|+ -|.|.|||.|+||.++| .|| .|+++.|+|.|||.++++| ..+...+
T Consensus 105 ~~~~~lT~lQe~L~kKlG~nayPF~f~LP~~lP-------sSv~LQp~p~d~Gk~cgV~YeVKafia~~~~~~~dk~~Kr 177 (380)
T 3ugu_A 105 GASGATTRLQESLIKKLGANTYPFLLTFPDYLP-------CSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKK 177 (380)
T ss_dssp SCCCCCCHHHHHHHHHHCTTEEEEEECCCSSCC-------CSEEECCCTTCCSCCEEEEEEEEEEEEBCCSSSSSBCCGG
T ss_pred CCCCCCCHHHHHHHHHhCcCceeEEEeCCCCCC-------CEEEeccCCccCCCccceEEEEEEEEccCccccccccccc
Confidence 122 38899999999999855 466 4888999999999999999 3222333
Q ss_pred EEEEEEEecCcccccCCCCC-ceeEEEecccccCCCccCCccccceEEEEEE-eccccCCCceEEEEEEE-EecCCeeEE
Q 023426 172 TVEFIVETDKADLLERPVSP-EMVVFYITQDTQRHPLLPELKSGGFKVTGKM-STQCSLLDPITGELTVE-ASSVPIHSI 248 (282)
Q Consensus 172 ~~eF~V~~~~~dl~~~p~~~-~pv~f~I~~dtl~~~~i~~~~~~~F~i~g~~-k~~~~l~d~i~G~i~~~-~s~i~Ik~i 248 (282)
..-+.+..+ ++..|..+ .+-..++.+.-+ +..+..+++..+ +..|.-+|+|.-.+.+. +|+..|+.|
T Consensus 178 ~sV~L~Irk---lq~aP~~~~~~P~~e~~K~F~-------~ssGpl~L~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~I 247 (380)
T 3ugu_A 178 SSVRLLIRK---VQHAPRDMGPQPRAEASWQFF-------MSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKI 247 (380)
T ss_dssp GEEEEEEEE---EEBCCSCCCCCCEEEEEEECT-------TCCCEEEEEEEESCSEEETTCCEEEEEEEEECSSSCEEEE
T ss_pred ceEEEeeee---cccCCcccCCCCcceEEEEeE-------ecCCCEEEEEEeCCccCcCCCEEEEEEEEEcCCCCeEeEE
Confidence 222222121 11222111 112345554311 344667899999 78899999999888888 888999999
Q ss_pred EEEEEEEEEEEe
Q 023426 249 DIHLLRMESILL 260 (282)
Q Consensus 249 ElqLiR~Et~g~ 260 (282)
+++|++.-++-.
T Consensus 248 kv~L~Q~~~v~l 259 (380)
T 3ugu_A 248 KVLVEQVTNVVL 259 (380)
T ss_dssp EEEEEEEEEECS
T ss_pred EEEEEEEEEEEE
Confidence 999999998753
No 6
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=96.85 E-value=0.034 Score=53.04 Aligned_cols=127 Identities=13% Similarity=0.183 Sum_probs=79.0
Q ss_pred EEEEEECCCCCCcCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeEEeeCCcc
Q 023426 37 TVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGR 116 (282)
Q Consensus 37 ~~~I~fd~~~~vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~la~~G~ 116 (282)
.+++.+|+ ..|.|||+|.-.|.|++......+.|++.+...+++. +|.+.+.. ...........
T Consensus 198 ~l~~sldk--~~Y~pGE~I~v~v~I~N~S~k~Vk~Ikv~L~Q~~~~~-----------~~s~~~~k---~~Va~~e~~~~ 261 (393)
T 1g4m_A 198 HLEASLDK--EIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADIC-----------LFNTAQYK---CPVAMEEADDT 261 (393)
T ss_dssp EEEEEESC--SEEETTCCEEEEEEEEECSSCCEEEEEEEEEEEEEEC-----------SSBCEEEE---EEEEEEEECCC
T ss_pred EEEEEECC--ceEcCCCEEEEEEEEEcCCCCEEeEEEEEEEEEEEEE-----------EecCCceE---EEEEEEecCCc
Confidence 36677765 6799999999999999999999999999999876442 11111111 11111221224
Q ss_pred cCCCceEeeeEEEcCCCCCccccc---------c--cceEE-eeeeE-----------EEEEEEEEEEeccc-------C
Q 023426 117 IGSGTTEVPFSMNLKQHGEENLER---------F--YETFH-GADIN-----------IQYLVTVDIMRGYL-------H 166 (282)
Q Consensus 117 Lp~G~~~fPF~F~Lp~~~~~~~~~---------l--~ESy~-G~~g~-----------vrY~vkv~i~Rp~~-------~ 166 (282)
+++|. ++.+.|.|++.-+|+.++ - -.+.. ..-.+ |.|.|+|.++-++. .
T Consensus 262 V~~gs-~~~~~~~L~P~l~p~~~~~~~aldg~lk~~dt~l~ss~ii~~~~~~~~~gi~VsY~vkV~l~v~~gg~~~~~~~ 340 (393)
T 1g4m_A 262 VAPSS-TFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLAS 340 (393)
T ss_dssp BCTTE-EEEEEEEECCCGGGTTTCSSEEESSCTTSTTCCBCCCCCCCTTCCSGGGSEEEEEEEEEEEEECCC--------
T ss_pred CCCCC-EEeeEEEEcCCCCCcccccceeeccccccCCcccccceeecCCCCccccceEEEEEEEEEEEecCCCccccccc
Confidence 66664 478888886432220000 0 01111 12234 99999999999873 2
Q ss_pred CCceEEEEEEEEec
Q 023426 167 KSLSATVEFIVETD 180 (282)
Q Consensus 167 ~d~~~~~eF~V~~~ 180 (282)
.++..+.+|++-.+
T Consensus 341 ~~l~~~lPi~i~~p 354 (393)
T 1g4m_A 341 SDVAVELPFTLMHP 354 (393)
T ss_dssp CEEEEEEEEEEECC
T ss_pred ccEEEEeCEEEecC
Confidence 37999999998543
No 7
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=96.48 E-value=0.066 Score=50.14 Aligned_cols=121 Identities=15% Similarity=0.204 Sum_probs=75.6
Q ss_pred EEEEECCCCCCcCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeEEeeCCccc
Q 023426 38 VEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRI 117 (282)
Q Consensus 38 ~~I~fd~~~~vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~la~~G~L 117 (282)
+.|.|.=+...|.+||.|.|+|.+... .++.+.+.+.+.-.-.+. ...+. ..|+ .++. ..++ -+|.-
T Consensus 176 l~Ie~~~~ks~y~lgd~I~G~I~f~~s-~i~Ik~iel~LiR~Et~~-~~~~~-~~e~-------~~i~--k~eI-mdG~p 242 (340)
T 2r51_A 176 LHIEFEYNKSKYHLKDVIVGKIYFLLV-RIKIKHMEIDIIKRETTG-TGPNV-YHEN-------DTIA--KYEI-MDGAP 242 (340)
T ss_dssp EEEEEEESCSEEETTCEEEEEEEEEEE-CSCEEEEEEEEEEEEEEE-ETTEE-EEEE-------EEEE--EEEE-EESCC
T ss_pred EEEEEEECcccccCCCeEEEEEEEEEe-eceeEEEEEEEEEEEEEe-cCCCe-eEEE-------EEEE--EEEE-ecCCc
Confidence 444454455679999999999998744 366667777765432221 11110 0000 1111 1122 24544
Q ss_pred CCCceEeeeEEEcCCCCCcccccccceEE--eeeeEEEEEEEEEEEecccCCCceEEEEEEEEe
Q 023426 118 GSGTTEVPFSMNLKQHGEENLERFYETFH--GADINIQYLVTVDIMRGYLHKSLSATVEFIVET 179 (282)
Q Consensus 118 p~G~~~fPF~F~Lp~~~~~~~~~l~ESy~--G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~ 179 (282)
-.|. .+||.+.||.. .+..||. ....+|+|+|.+++.=.-. ..+.+..++++..
T Consensus 243 ~rge-~IPirl~Lp~~------~l~PT~~~~~~~fsV~Y~Lnlvl~~e~~-~~~~kq~pI~L~R 298 (340)
T 2r51_A 243 VRGE-SIPIRLFLAGY------ELTPTMRDINKKFSVRYYLNLVLIDEEE-RRYFKQQEVVLWR 298 (340)
T ss_dssp CTTC-EEEEEEEGGGS------CCCCCEEEETTTEEEEEEEEEEEEETTC-CEEEEEEEEEEEC
T ss_pred cCCC-EEEEEEECCCC------CCCCCccccCCeEEEEEEEEEEEEeCCC-cEEEEEeeEEEEE
Confidence 4554 58999999862 2455888 7789999999999987664 3688888888843
No 8
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=96.42 E-value=0.031 Score=52.45 Aligned_cols=120 Identities=16% Similarity=0.176 Sum_probs=70.3
Q ss_pred EEEEECCCCCCcCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeEEeeCCccc
Q 023426 38 VEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRI 117 (282)
Q Consensus 38 ~~I~fd~~~~vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~la~~G~L 117 (282)
+.|.|.=++..|.+||.|.|++.+.+. .++.+.|.+.+.-...+...... ..|+ .++. ..++ -+|.-
T Consensus 176 L~ieF~~~ks~y~l~d~I~G~I~f~~s-~i~Ik~iel~LiR~Et~~~~~~~--~~e~-------~~i~--k~eI-mDG~p 242 (341)
T 2fau_A 176 LHIEFEYNKSKYHLKDVIVGKIYFLLV-RIKIQHMELQLIKKEITGIGPST--TTET-------ETIA--KYEI-MDGAP 242 (341)
T ss_dssp EEEEEEESCSEEETTCEEEEEEEEEEE-CSCEEEEEEEEEEEEEESCGGGC--EEEE-------EEEE--EEEC-CCC--
T ss_pred EEEEEEEccccccCCCeEEEEEEEEEe-ccceEEEEEEEEEEEEEcCCCCe--eeEE-------EEEE--EEEE-eCCCc
Confidence 344665566789999999999998754 46777788877654322111110 0110 1111 1233 24665
Q ss_pred CCCceEeeeEEEcCCCCCcccccccceEE--eeeeEEEEEEEEEE-EecccCCCceEEEEEEEEe
Q 023426 118 GSGTTEVPFSMNLKQHGEENLERFYETFH--GADINIQYLVTVDI-MRGYLHKSLSATVEFIVET 179 (282)
Q Consensus 118 p~G~~~fPF~F~Lp~~~~~~~~~l~ESy~--G~~g~vrY~vkv~i-~Rp~~~~d~~~~~eF~V~~ 179 (282)
-.|. .+||.+.||.. .+..||. ....+|+|+|.+.+ +-.+. ...+..|++...
T Consensus 243 ~rge-~IPirl~Lp~~------~l~PT~~~~~~~fsV~Y~Lnlvlvde~~r--ryfk~~EI~L~R 298 (341)
T 2fau_A 243 VKGE-SIPIRLFLAGY------DPTPTMRDVNKKFSVRYFLNLVLVDEEDR--RYFKQQEIILWR 298 (341)
T ss_dssp -----CEEEEEESTTT------CCCCCEEEEETTEEEEEEEEEEEEETTCC--EEEEEEEEEEEC
T ss_pred cCCC-EEEEEEEcCCC------CCCCcchhcCCeEEEEEEEEEEEEeCCCC--eeeeeeEEEEEE
Confidence 5665 58999999962 2455888 77899999999999 43321 144556666633
No 9
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=96.39 E-value=0.085 Score=50.36 Aligned_cols=124 Identities=16% Similarity=0.233 Sum_probs=78.7
Q ss_pred EEEEECCCCCCcCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeEEeeCCccc
Q 023426 38 VEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRI 117 (282)
Q Consensus 38 ~~I~fd~~~~vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~la~~G~L 117 (282)
+++.+|+ ..|++||+|.=.|.|++......+.|++.+.-.+.+.. |++.+ +-.....+...+.+
T Consensus 196 l~vsLdK--~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l-----------~s~~~---~k~~Va~~e~~e~V 259 (392)
T 1suj_A 196 LEASLDK--EIYYHGEPINVNVKINNTTGKIVKKIKIIVEQVTDVVL-----------FSLDK---YVKTVCAEETNDTV 259 (392)
T ss_dssp EEEEESC--SEEETTCCEEEEEEEEECSSSEEEEEEEEEEEEEEECS-----------SSCCE---EEEEEEEEECCCCB
T ss_pred EEEEeCC--ccccCCCEEEEEEEEECCCCCcEeEEEEEEEEEEEEEE-----------ecCCc---EEEEEEEEecCCCc
Confidence 5666655 67999999999999999988899999999987765531 11111 11111123233356
Q ss_pred CCCceEeeeEEEcCCCCCcccc---------------cccceEEeee--------eEEEEEEEEEEEecccC-------C
Q 023426 118 GSGTTEVPFSMNLKQHGEENLE---------------RFYETFHGAD--------INIQYLVTVDIMRGYLH-------K 167 (282)
Q Consensus 118 p~G~~~fPF~F~Lp~~~~~~~~---------------~l~ESy~G~~--------g~vrY~vkv~i~Rp~~~-------~ 167 (282)
++|.+ +-+.|.|.+.-+++.+ -|-.|=.+.. +.|.|.|+|.+.-++.+ .
T Consensus 260 ~pgst-~~k~~~L~P~l~~n~~k~glaldg~lk~~dTnLassti~~~~~~~~~~gI~VsY~vkVkl~v~~gg~~~~~~s~ 338 (392)
T 1suj_A 260 AANST-LSKTFSVTPMLANNREKRGLALDGKLKHEDTNLASTTVIRPGMDKEVLGILVSYKVKVHLVVARGGILGDLTSS 338 (392)
T ss_dssp CTTEE-EEEEEEECCCGGGCSCCTTCCBSSCTTBSSCCBCCCCCCCTTSCGGGGSEEEEEEEEEEEEEETTSSTTCCCCE
T ss_pred CCCCE-EEEEEEEeccccCCCccceeeecccccCCCccccccccccCCCCccccceEEEEEEEEEEEEcCCccccccccc
Confidence 66654 7788887643221000 0112222111 69999999999998721 3
Q ss_pred CceEEEEEEEE
Q 023426 168 SLSATVEFIVE 178 (282)
Q Consensus 168 d~~~~~eF~V~ 178 (282)
++..+.+|++-
T Consensus 339 d~~velPf~L~ 349 (392)
T 1suj_A 339 DVAVELPLTLM 349 (392)
T ss_dssp EEEEEEEEEEE
T ss_pred CeeEEECeEEe
Confidence 79999999983
No 10
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=90.00 E-value=9.4 Score=36.08 Aligned_cols=44 Identities=23% Similarity=0.365 Sum_probs=38.8
Q ss_pred EEEEECCCCCCcCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEE
Q 023426 38 VEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQ 83 (282)
Q Consensus 38 ~~I~fd~~~~vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~ 83 (282)
+++.+|+ ..|++||+|.=.|.|++......+.|++.+.-.+++.
T Consensus 215 L~vsLdK--~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~ 258 (380)
T 3ugu_A 215 LAVSLSK--EIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVV 258 (380)
T ss_dssp EEEEESC--SEEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEEC
T ss_pred EEEEeCC--ccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEE
Confidence 6667765 6799999999999999999999999999999888775
No 11
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=81.23 E-value=44 Score=32.86 Aligned_cols=84 Identities=13% Similarity=0.150 Sum_probs=45.1
Q ss_pred EeeeEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEEecCcccccCCCCCceeEEEecccc
Q 023426 123 EVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDT 202 (282)
Q Consensus 123 ~fPF~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~~~~dl~~~p~~~~pv~f~I~~dt 202 (282)
.|.++|+||+.++ .| .|.|+|.... - .+......|.|+.... | ..+..+.+..
T Consensus 166 ~~~~~f~Lp~~~~----------~G-----~w~I~v~~~~-~--~~~~~~~~F~VeeYvl--------P-~feV~i~~~~ 218 (645)
T 2hr0_A 166 VLPLSWDIPELVN----------MG-----QWKIRAYYEN-S--PQQVFSTEFEVKEYVL--------P-SFEVIVEPTE 218 (645)
T ss_dssp EEEEEEECCSSCC----------CS-----EEEEEEEETT-C--TTSEEEEEEECCCSCC--------C-CCEEEEEESS
T ss_pred eEEEEEECCCccc----------cc-----cEEEEEEECC-C--CCceEEEEEEEeeccC--------C-eEEEEEEcCc
Confidence 3689999998622 34 5778776531 1 1345778899954322 1 2233333311
Q ss_pred cCCCccCCccc-cceEEEEEEeccccCCCceEEEEEEE
Q 023426 203 QRHPLLPELKS-GGFKVTGKMSTQCSLLDPITGELTVE 239 (282)
Q Consensus 203 l~~~~i~~~~~-~~F~i~g~~k~~~~l~d~i~G~i~~~ 239 (282)
.... .+. ..+. +.+...|..+.|+.|+..+.
T Consensus 219 --~~~~--~~~~~~~~--v~v~a~Y~~G~Pv~G~a~v~ 250 (645)
T 2hr0_A 219 --KFYY--IYNEKGLE--VTITARFLYGKKVEGTAFVI 250 (645)
T ss_dssp --SSEE--TTCTTCEE--EEEEEECTTSCBCCEEEEEE
T ss_pred --eeEe--cCCCcEEE--EEEEEEEcCCCeeeeEEEEE
Confidence 0000 111 2233 33445688899999976553
No 12
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=77.32 E-value=48 Score=32.86 Aligned_cols=157 Identities=13% Similarity=0.153 Sum_probs=0.0
Q ss_pred EEEEECCCCCCcCCCCcEeEEEEEEeCC--ceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeEEeeCCc
Q 023426 38 VEIKLSRSNRIYRPSEPLQGKIVIKSSS--SIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSG 115 (282)
Q Consensus 38 ~~I~fd~~~~vY~~GE~VsG~V~i~~~~--~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~la~~G 115 (282)
+-|.-|| .+|+|||+|.=++.+...+ +. .+-+.+.+. .|-.-.-....+...
T Consensus 106 ~fi~TDr--~iYrPGqtV~~r~i~~d~~~~p~-~~~~~v~i~----------------------dP~g~~i~~~~~~~~- 159 (627)
T 3hrz_A 106 LFIQTDK--GIYTPGSPVLYRVFSMDHNTSKM-NKTVIVEFQ----------------------TPEGILVSSNSVDLN- 159 (627)
T ss_dssp EEEEESC--SEECTTCEECEEEEESCC--------CEEEEEE----------------------CTTCCEEEEEEEBTT-
T ss_pred EEEECCC--CccCCCCEEEEEEEEECCCCccc-CccEEEEEE----------------------CCCCCEEEEEEeccc-
Q ss_pred ccCCCceEeeeEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCC--ceEEEEEEEEecCcccccCCCCCce
Q 023426 116 RIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKS--LSATVEFIVETDKADLLERPVSPEM 193 (282)
Q Consensus 116 ~Lp~G~~~fPF~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d--~~~~~eF~V~~~~~dl~~~p~~~~p 193 (282)
|.++|+||+. .=.| .|.|+|... + ......|.|+.... |.
T Consensus 160 --------~~~~f~Lp~~----------~~~G-----~w~i~v~~~------~~~~~~~~~F~Veeyv~--------P~- 201 (627)
T 3hrz_A 160 --------FFWPYNLPDL----------VSLG-----TWRIVAKYE------HSPENYTAYFDVRKYVL--------PS- 201 (627)
T ss_dssp --------BCCCEECCSS----------CCCE-----EEEEEEEET------TCSCCEEEEEEECCCCC--------CS-
T ss_pred --------eEEEEECCCC----------CCCe-----eEEEEEEEC------CCceEEEEEEEEeEEEC--------Cc-
Q ss_pred eEEEecccccCCCc-cCCcccc-ceEEEEEEeccccCCCceEEEEEEEEecCCeeEEEEEEEEEEEEEeCCceeeeeeeE
Q 023426 194 VVFYITQDTQRHPL-LPELKSG-GFKVTGKMSTQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLI 271 (282)
Q Consensus 194 v~f~I~~dtl~~~~-i~~~~~~-~F~i~g~~k~~~~l~d~i~G~i~~~~s~i~Ik~iElqLiR~Et~g~~~~~~~e~tei 271 (282)
|++.-+.-+... + . +=.+.+.+...|..+.|+.|.+++..+ .........=...+
T Consensus 202 --feV~~~~~~~~~~~-----~~~~~~~~~v~a~y~~G~Pv~G~v~v~~~----------------~~~~~~~~~~~~~~ 258 (627)
T 3hrz_A 202 --FEVRLQPSEKFFYI-----DGNENFHVSITARYLYGEEVEGVAFVLFG----------------VKIDDAKKSIPDSL 258 (627)
T ss_dssp --EEEEEEESSSEEET-----TCCCCEEEEEEEEETTSCBCCEEEEEEEE----------------EEETTEEEECGGGC
T ss_pred --EEEEEecCcceEEe-----cCCCEEEEEEEEEECCCCEeccEEEEEEE----------------EccCCceeeccchh
Q ss_pred EEEEeecccc
Q 023426 272 QTTQMEMSVA 281 (282)
Q Consensus 272 q~iqI~dg~~ 281 (282)
+..++.||.+
T Consensus 259 ~~~~~~~G~g 268 (627)
T 3hrz_A 259 TRIPIIDGDG 268 (627)
T ss_dssp EEEEEBTTEE
T ss_pred eeEEecCCeE
No 13
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=75.34 E-value=83 Score=33.79 Aligned_cols=26 Identities=8% Similarity=0.445 Sum_probs=19.5
Q ss_pred EEEEECCCCCCcCCCCcEeEEEEEEeCC
Q 023426 38 VEIKLSRSNRIYRPSEPLQGKIVIKSSS 65 (282)
Q Consensus 38 ~~I~fd~~~~vY~~GE~VsG~V~i~~~~ 65 (282)
+-|..|| .+|+|||+|.=++.+....
T Consensus 102 ~fi~TDr--~iYrPGqtV~~r~~~~~~~ 127 (1325)
T 2pn5_A 102 GLIQVDK--PVFKPGDTVNFRVIVLDTE 127 (1325)
T ss_dssp EEEEESC--SEECTTCEEEEEEEEEETT
T ss_pred EEEecCC--CccCCCCEEEEEEEEecCC
Confidence 4455555 5899999999998877543
No 14
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=73.38 E-value=40 Score=32.79 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=47.4
Q ss_pred CCCceEeeeEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEEecCcccccCCCCCceeEEE
Q 023426 118 GSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFY 197 (282)
Q Consensus 118 p~G~~~fPF~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~~~~dl~~~p~~~~pv~f~ 197 (282)
..| .|.++|+||+..+ .| .|.|+|..+-.- .......|.|+.... | ..+..
T Consensus 175 ~~G--~~~~~f~Lp~~~~----------~G-----~w~i~v~~~~~~---~~~~s~~F~Veeyvl--------P-~feV~ 225 (656)
T 4fxk_A 175 PSS--IFQDDFVIPDISE----------PG-----TWKISARFSDGL---ESNSSTQFEVKKYVL--------P-NFEVK 225 (656)
T ss_dssp TTS--EEEEEEECCTTCC----------SE-----EEEEEEEESSCT---TCCCCEEEEECCCCC--------C-SEEEE
T ss_pred CCc--eEEEEecCCCCCC----------Cc-----CEEEEEEEcCCC---ceeEEEEEEEEEEec--------C-cEEEE
Confidence 345 4789999997621 15 678887765321 234457799954322 2 23334
Q ss_pred ecccccCCCccCCc-cccceEEEEEEeccccCCCceEEEEEEEE
Q 023426 198 ITQDTQRHPLLPEL-KSGGFKVTGKMSTQCSLLDPITGELTVEA 240 (282)
Q Consensus 198 I~~dtl~~~~i~~~-~~~~F~i~g~~k~~~~l~d~i~G~i~~~~ 240 (282)
+.++.- ..+... ....+.+ .+...|..+.|+.|+.++..
T Consensus 226 i~~~~~--~~~~~~~~~~~~~v--~v~a~Y~~G~PV~G~~~v~~ 265 (656)
T 4fxk_A 226 ITPGKP--YILTVPGHLDEMQL--DIQARYIYGKPVQGVAYVRF 265 (656)
T ss_dssp EEESSS--SCCEETTEECCCEE--EEEEEETTCCCCCSEEEEEE
T ss_pred EecCcc--eeeeccCCCCeEEE--EEEEEEccCccEeeEEEEEE
Confidence 443210 000000 1122333 33456788899999877663
No 15
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=58.60 E-value=17 Score=26.86 Aligned_cols=25 Identities=20% Similarity=0.466 Sum_probs=19.8
Q ss_pred EEEEECCCCCCcCCCCcEeEEEEEEeC
Q 023426 38 VEIKLSRSNRIYRPSEPLQGKIVIKSS 64 (282)
Q Consensus 38 ~~I~fd~~~~vY~~GE~VsG~V~i~~~ 64 (282)
+-|..|+ .+|+|||+|.=++.+...
T Consensus 4 ~fi~tDr--~iYrPGetV~~~~~~~~~ 28 (102)
T 2p9r_A 4 VFVQTDK--SIYKPGQTVKFRVVSMDE 28 (102)
T ss_dssp EEEEESC--SEECTTCEEEEEEEEECG
T ss_pred EEEECCC--cccCCCCEEEEEEEEECC
Confidence 4566766 689999999999987643
No 16
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=57.80 E-value=70 Score=35.44 Aligned_cols=40 Identities=13% Similarity=0.157 Sum_probs=26.1
Q ss_pred Eee-eEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEEec
Q 023426 123 EVP-FSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETD 180 (282)
Q Consensus 123 ~fP-F~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~~ 180 (282)
.|. ++|+||+..+ .| .|.|+|.... |. +......|.|+..
T Consensus 182 ~~~~~~f~Lp~~~~----------~G-----~w~I~v~~~~-~~--~~~~s~~F~VeEY 222 (1676)
T 3cu7_A 182 IISFPDFKIPSNPR----------YG-----MWTIKAKYKE-DF--STTGTAYFEVKEY 222 (1676)
T ss_dssp EEECCCEECCSSCC----------CE-----EEEEEEEBSS-SC--CCEEEEEEEECEE
T ss_pred ceecceeeCCCCcc----------cc-----ceEEEEEecC-CC--CceEEEEEEEccc
Confidence 367 7999998622 35 6778776532 21 3457888999654
No 17
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=52.10 E-value=1.6e+02 Score=32.86 Aligned_cols=83 Identities=13% Similarity=0.124 Sum_probs=45.8
Q ss_pred eeeEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEEecCcccccCCCCCceeEEEeccccc
Q 023426 124 VPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQ 203 (282)
Q Consensus 124 fPF~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~~~~dl~~~p~~~~pv~f~I~~dtl 203 (282)
|.++|+||+.. -.| .|.|+|..+.. . ......|.|+.... |. .+..+.+..
T Consensus 182 ~~~~f~L~~~~----------~~G-----~w~I~v~~~~~---~-~~~~~~F~VeeYvl--------P~-FeV~v~~~~- 232 (1642)
T 3prx_B 182 FFWPYNLPDLV----------SLG-----TWRIVAKYEHS---P-ENYTAYFDVRKYVL--------PS-FEVRLQPSE- 232 (1642)
T ss_dssp CCCEEECCSSC----------CCE-----EEEEEEEETTE---E-EEEEEEEEECSCCC--------CS-EEEEEEESS-
T ss_pred ceEEEEcCCCC----------Cce-----eEEEEEEeCCC---C-cEEEEEEEEEEEec--------Cc-EEEEEeccc-
Confidence 78899999762 235 67787765420 0 35677899943321 22 333343321
Q ss_pred CCCccCCcc-ccceEEEEEEeccccCCCceEEEEEEEE
Q 023426 204 RHPLLPELK-SGGFKVTGKMSTQCSLLDPITGELTVEA 240 (282)
Q Consensus 204 ~~~~i~~~~-~~~F~i~g~~k~~~~l~d~i~G~i~~~~ 240 (282)
.... +. .+.|.+ .+..+|..+.|+.|.+++..
T Consensus 233 -~~~~--~~~~~~~~v--~V~ArY~yGkPV~G~v~v~f 265 (1642)
T 3prx_B 233 -KFFY--IDGNENFHV--SITARYLYGEEVEGVAFVLF 265 (1642)
T ss_dssp -SEEE--TTSCCCEEE--EEEEEETTSCBCCEEEEEEE
T ss_pred -eeEE--ecCCCeEEE--EEEEEeCCCCceeeeEEEEE
Confidence 0000 11 233443 34456888999999977653
No 18
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=49.19 E-value=1.3e+02 Score=33.06 Aligned_cols=84 Identities=21% Similarity=0.257 Sum_probs=46.9
Q ss_pred eeeEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEEecCcccccCCCCCceeEEEeccccc
Q 023426 124 VPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQ 203 (282)
Q Consensus 124 fPF~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~~~~dl~~~p~~~~pv~f~I~~dtl 203 (282)
+..+|+||+.. -.| .|.|+|... .+...+..|.|+.... |. .+..+.+..
T Consensus 165 ~~~~f~L~~~~----------~~G-----~w~I~~~~~-----~~~~~~~~F~V~eYvl--------P~-FeV~v~~~~- 214 (1451)
T 4acq_A 165 KQFSFPLSSEP----------FQG-----SYKVVVQKK-----SGGRTEHPFTVEEFVL--------PK-FEVQVTVPK- 214 (1451)
T ss_dssp EEEEEECCSSC----------CCE-----EEEEEEECT-----TCCEEEEEEEECCCCC--------CS-CEEEEECCS-
T ss_pred EEEEeECCCCC----------Cce-----eEEEEEEec-----CCceEEEEEEEeeeeC--------Cc-EEEEEeCCc-
Confidence 57899999751 135 577777653 2346788899954332 22 122222211
Q ss_pred CCCccCCccccceEEEEEEeccccCCCceEEEEEEEEecC
Q 023426 204 RHPLLPELKSGGFKVTGKMSTQCSLLDPITGELTVEASSV 243 (282)
Q Consensus 204 ~~~~i~~~~~~~F~i~g~~k~~~~l~d~i~G~i~~~~s~i 243 (282)
...+ ....|.++ +..+|..+.|+.|++++..++.
T Consensus 215 -~~~~---~~~~~~~~--i~a~Y~~G~pV~G~~~v~~~~~ 248 (1451)
T 4acq_A 215 -IITI---LEEEMNVS--VCGLYTYGKPVPGHVTVSICRK 248 (1451)
T ss_dssp -EEES---SCSCCEEE--EEEECSSSCBCCCEEEECCBCC
T ss_pred -eEee---cCCEEEEE--EEEEEcCCCEEcceEEEEEEEe
Confidence 0001 11234433 3466889999999988765443
No 19
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=42.64 E-value=2.2e+02 Score=31.44 Aligned_cols=23 Identities=17% Similarity=0.395 Sum_probs=17.1
Q ss_pred EEECCCCCCcCCCCcEeEEEEEEeC
Q 023426 40 IKLSRSNRIYRPSEPLQGKIVIKSS 64 (282)
Q Consensus 40 I~fd~~~~vY~~GE~VsG~V~i~~~ 64 (282)
|..|| .+|+|||+|.=++.+...
T Consensus 131 iqTDR--~iYrPGqtV~~r~i~~d~ 153 (1661)
T 2b39_A 131 IQTDK--TIYTPGSTVLYRVFTVDH 153 (1661)
T ss_dssp EEESC--SEECTTSEEEEEEEEECT
T ss_pred EecCC--CccCCCCEEEEEEEEECC
Confidence 44444 589999999988877643
No 20
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=36.64 E-value=1.5e+02 Score=23.16 Aligned_cols=43 Identities=9% Similarity=0.074 Sum_probs=32.2
Q ss_pred cCCCCeeEEEEEECCCCCCcCCCCcEeEEEEEEeCCceeEeeEEEEE
Q 023426 30 KLQIDMSTVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTV 76 (282)
Q Consensus 30 ~~~~~m~~~~I~fd~~~~vY~~GE~VsG~V~i~~~~~l~h~gI~i~~ 76 (282)
...||+. |.+.-|. .-..|+.++=+|+|++.....+.+.++.+
T Consensus 14 ~~~pDL~---V~is~P~-~v~~G~~~ti~vtV~N~G~~~a~~~~V~l 56 (127)
T 3idu_A 14 FEFPDLT---VEIKGPD-VVGVNKLAEYEVHVKNLGGIGVPSTKVRV 56 (127)
T ss_dssp CSSCCEE---EEEESCS-EECTTCCEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccCCCeE---EEecCCC-cccCCCEEEEEEEEEECCCCccCCcEEEE
Confidence 5667754 4445555 45799999999999999877777777765
No 21
>3njn_A Peptidase; structural genomics, autocatalysis, PSI- protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 1.25A {Shewanella oneidensis} PDB: 3n55_A 2ai4_A 3njm_A 3nji_A 3njf_A 3njg_A 3njk_A 3njl_A 3njj_A 3njh_A
Probab=35.70 E-value=32 Score=27.17 Aligned_cols=44 Identities=20% Similarity=0.266 Sum_probs=28.7
Q ss_pred eEEEEEECCCCC--CcC--CCCcEeEEEEEEeCC----ceeEe-eEEEEEEEE
Q 023426 36 STVEIKLSRSNR--IYR--PSEPLQGKIVIKSSS----SIFHY-GIHLTVNGS 79 (282)
Q Consensus 36 ~~~~I~fd~~~~--vY~--~GE~VsG~V~i~~~~----~l~h~-gI~i~~~G~ 79 (282)
-.+.|.|++.+. .|. +|+.++|.|+|+... .+.++ |--+.+-|.
T Consensus 14 f~v~VtL~n~ep~F~Yt~~~G~~~tG~v~Vt~~ttItY~L~d~t~kGl~F~Ga 66 (119)
T 3njn_A 14 IKVNVTLENGEPVFIYTDANGQVCQGDITVTQAGTITYLLNDQTLKGLKFVGV 66 (119)
T ss_dssp EEEEEEEETTEEEEEEECTTSCEECCCEEESSSEEEEEEEEECSSSCCEEEEE
T ss_pred EEEEEEEeCCCcEEEEEccCCCCcCCCEEEeecceEEEEeccccCCCcEEEcc
Confidence 358888887655 465 899999999997543 34444 223444454
No 22
>2zou_A Spondin-1; beta-sandwich, extracellular protein, cell adhesion, extrace matrix, glycoprotein, secreted; 1.45A {Homo sapiens}
Probab=30.85 E-value=94 Score=24.92 Aligned_cols=44 Identities=9% Similarity=0.348 Sum_probs=30.4
Q ss_pred CCCeeEEEEEECCCCCCcCCCCcEeEEEEEEeCCceeEeeEEEEEE
Q 023426 32 QIDMSTVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVN 77 (282)
Q Consensus 32 ~~~m~~~~I~fd~~~~vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~ 77 (282)
++...-+.|..+.....|.||+.++ |+|........+|.-|.++
T Consensus 18 ~~~~~py~i~i~~~~~~y~pG~~~~--VtL~~~~~~~F~GFllqAr 61 (149)
T 2zou_A 18 REGYTEFSLRVEGDPDFYKPGTSYR--VTLSAAPPSYFRGFTLIAL 61 (149)
T ss_dssp CCSCCSEEEEETTCCSSBCTTCEEE--EEEEECTTCCBSEEEEEEE
T ss_pred CCCCCCEEEEEecCCceEcCCCcEE--EEEeccCCCceEEEEEEEE
Confidence 3343448888876566799999987 4444444456788888876
No 23
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=21.96 E-value=4.7e+02 Score=26.49 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=58.7
Q ss_pred EEEEECCCCCCcCCCCcEeEEEEEEeCCceeEeeEEEEEEEEEEEEEecCcceeEEEeecceecEEEeeeeEEeeCCccc
Q 023426 38 VEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRI 117 (282)
Q Consensus 38 ~~I~fd~~~~vY~~GE~VsG~V~i~~~~~l~h~gI~i~~~G~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~la~~G~L 117 (282)
+.+.|+-.+.+ -|+++.=.|.+++...-. +-+++.+.+++. +|+.....++......+ .|
T Consensus 473 v~~~i~~~~~~--~G~df~v~v~~~N~s~~~-~~v~~~l~a~~v-------------~YtG~~~~~~~~~~~~~----~L 532 (695)
T 1g0d_A 473 LQLSIKHAQPV--FGTDFDVIVEVKNEGGRD-AHAQLTMLAMAV-------------TYNSLRRGECQRKTISV----TV 532 (695)
T ss_dssp EEEEEEECCCB--TTCCEEEEEEEEECSSSC-EEEEEEEEEEEE-------------CTTCBCCCCCCEEEEEE----EE
T ss_pred eEEEEEeCCCC--CCCCEEEEEEEEECCCCC-EEEEEEEEEEEE-------------eeCCcccCceeEeeEEE----EE
Confidence 44555544555 699999999998876433 567777766543 23322112222221111 12
Q ss_pred CCCceEeeeEEEcCCCCCcccccccceEEeeeeEEEEEEEEEEEecccCCCceEEEEEEEEecCc
Q 023426 118 GSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKA 182 (282)
Q Consensus 118 p~G~~~fPF~F~Lp~~~~~~~~~l~ESy~G~~g~vrY~vkv~i~Rp~~~~d~~~~~eF~V~~~~~ 182 (282)
+++.. =.....++.. .|..+-.-+..||-.+-+++.-.- ..+..+++|.+..+..
T Consensus 533 ~p~~~-~~v~~~i~y~-------~Y~~~L~d~~~i~~~a~~~v~et~--~~~~~~~di~l~~P~l 587 (695)
T 1g0d_A 533 PAHKA-HKEVMRLHYD-------DYVRCVSEHHLIRVKALLDAPGEN--GPIMTVANIPLSTPEL 587 (695)
T ss_dssp CTTEE-EEEEEEECHH-------HHTTTCCTTCEEEEEEEEECCC-----EEEEEEEEECBCCCC
T ss_pred CCCce-EEEEEEECHH-------HHhhhcccCCeEEEEEEEEECCCC--eEEEEEEEEEEcCCCE
Confidence 22221 1233333321 344443445677777777775432 1366777787755544
Done!