Your job contains 1 sequence.
>023428
MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL
LRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDI
AQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADL
RDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWME
IAQVEKLQQGPSQPFYQVLVDVHADPNILVAYGNCISLDPTP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023428
(282 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063761 - symbol:AT2G03390 species:3702 "Arabi... 755 7.3e-75 1
UNIPROTKB|F1NDZ7 - symbol:FBXO21 "Uncharacterized protein... 130 2.0e-06 2
UNIPROTKB|H0YHF6 - symbol:FBXO21 "F-box only protein 21" ... 118 4.7e-05 1
UNIPROTKB|H0YIE9 - symbol:FBXO21 "F-box only protein 21" ... 118 6.0e-05 2
RGD|1307346 - symbol:Fbxo21 "F-box protein 21" species:10... 119 6.4e-05 2
MGI|MGI:1924223 - symbol:Fbxo21 "F-box protein 21" specie... 119 8.2e-05 2
UNIPROTKB|E9PTD1 - symbol:Fbxo21 "Protein Fbxo21" species... 119 8.2e-05 2
UNIPROTKB|E2RKH1 - symbol:FBXO21 "Uncharacterized protein... 118 0.00011 2
UNIPROTKB|F1RKE9 - symbol:FBXO21 "Uncharacterized protein... 118 0.00011 2
UNIPROTKB|O94952 - symbol:FBXO21 "F-box only protein 21" ... 118 0.00011 2
ZFIN|ZDB-GENE-100922-229 - symbol:fbxo21 "F-box protein 2... 122 0.00011 1
>TAIR|locus:2063761 [details] [associations]
symbol:AT2G03390 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0004518 "nuclease
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006289 "nucleotide-excision repair" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] InterPro:IPR001943
InterPro:IPR011722 Pfam:PF02151 Pfam:PF08755 SMART:SM00992
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
SUPFAM:SSF141255 TIGRFAMs:TIGR02097 EMBL:AK176535 EMBL:AK176569
IPI:IPI00541632 RefSeq:NP_178438.2 UniGene:At.41397
ProteinModelPortal:Q67Y99 SMR:Q67Y99 PaxDb:Q67Y99 PRIDE:Q67Y99
EnsemblPlants:AT2G03390.1 GeneID:814868 KEGG:ath:AT2G03390
TAIR:At2g03390 eggNOG:NOG131964 HOGENOM:HOG000238301
InParanoid:Q67Y99 OMA:YNRPRHE PhylomeDB:Q67Y99
ProtClustDB:CLSN2681138 Genevestigator:Q67Y99 Uniprot:Q67Y99
Length = 330
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 166/274 (60%), Positives = 191/274 (69%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQ-GLHLRVTFN 59
MVQ SLSTLT G+ S L R + S IG DR C QF++ R +
Sbjct: 1 MVQSQSLSTLTICGSVKV--SSLLRNRLNSVKASSLIG-DR-CVSCQFLRKSPSFRSHWK 56
Query: 60 LLRQRNL-RANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
L+QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ A+N+E+Y
Sbjct: 57 SLKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 116
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE+Y LAA
Sbjct: 117 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 176
Query: 179 DLRDQICKXXXXXXXXXXXXXXXXXXRFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
LRD+I K +AFRLGQK+ HK FGYRAV+CGMDP+C ESSSW
Sbjct: 177 KLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPICSESSSW 236
Query: 239 MEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAY 272
ME A+VEKL +G +QPFYQVLVDV P++LVAY
Sbjct: 237 MEAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAY 270
>UNIPROTKB|F1NDZ7 [details] [associations]
symbol:FBXO21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001810 InterPro:IPR011722 Pfam:PF08755 SMART:SM00992
GO:GO:0003677 SUPFAM:SSF81383 OMA:LNSYIHQ SUPFAM:SSF141255
TIGRFAMs:TIGR02097 GeneTree:ENSGT00390000005653 EMBL:AADN02050456
IPI:IPI00585471 Ensembl:ENSGALT00000013355 Uniprot:F1NDZ7
Length = 612
Score = 130 (50.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 24/54 (44%), Positives = 29/54 (53%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
F +G + HK +GY VI G DP C W+ V L GP QPFY VLV+
Sbjct: 477 FSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLPHGPHQPFYNVLVE 530
Score = 48 (22.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 139 LEAKRGLSSKSEAQDKALSIIR-------LRADLQKAIDSENYALAADLRDQIC 185
+E ++GL+ K A+ K L +R L+ LQ+ D +++ A L DQ C
Sbjct: 137 MEGRKGLTWKYYAK-KILYFLRQQNILKNLKEYLQRPADQQSFLEGAVLIDQYC 189
>UNIPROTKB|H0YHF6 [details] [associations]
symbol:FBXO21 "F-box only protein 21" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR011722
Pfam:PF08755 SMART:SM00992 GO:GO:0003677 EMBL:AC026368
EMBL:AC026364 HGNC:HGNC:13592 SUPFAM:SSF141255 TIGRFAMs:TIGR02097
Ensembl:ENST00000548840 Bgee:H0YHF6 Uniprot:H0YHF6
Length = 225
Score = 118 (46.6 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+
Sbjct: 155 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE 208
>UNIPROTKB|H0YIE9 [details] [associations]
symbol:FBXO21 "F-box only protein 21" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR011722
Pfam:PF08755 SMART:SM00992 GO:GO:0003677 EMBL:AC026368
EMBL:AC026364 HGNC:HGNC:13592 SUPFAM:SSF141255 TIGRFAMs:TIGR02097
Ensembl:ENST00000550180 Uniprot:H0YIE9
Length = 505
Score = 118 (46.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+
Sbjct: 380 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE 433
Score = 45 (20.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
Q K L+ L+A LQ+ D E+Y A DQ C
Sbjct: 119 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 150
>RGD|1307346 [details] [associations]
symbol:Fbxo21 "F-box protein 21" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR011722 Pfam:PF08755 SMART:SM00992 RGD:1307346
GO:GO:0003677 SUPFAM:SSF141255 TIGRFAMs:TIGR02097
GeneTree:ENSGT00390000005653 IPI:IPI00870497
Ensembl:ENSRNOT00000064900 UCSC:RGD:1307346 ArrayExpress:F1M5Q6
Uniprot:F1M5Q6
Length = 572
Score = 119 (46.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+
Sbjct: 448 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE 501
Score = 45 (20.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
Q K L+ L+A LQ+ D E+Y A DQ C
Sbjct: 127 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 158
>MGI|MGI:1924223 [details] [associations]
symbol:Fbxo21 "F-box protein 21" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001810 InterPro:IPR011722 Pfam:PF08755 PROSITE:PS50181
SMART:SM00992 MGI:MGI:1924223 GO:GO:0003677 SUPFAM:SSF81383
CTD:23014 eggNOG:COG2912 HOGENOM:HOG000065670 HOVERGEN:HBG051569
KO:K10301 OMA:LNSYIHQ OrthoDB:EOG4JHCF6 SUPFAM:SSF141255
TIGRFAMs:TIGR02097 EMBL:AK048131 EMBL:AK048542 EMBL:AK049723
EMBL:AB093270 EMBL:BC021871 IPI:IPI00123296 IPI:IPI00459045
RefSeq:NP_663539.1 UniGene:Mm.21912 ProteinModelPortal:Q8VDH1
SMR:Q8VDH1 PhosphoSite:Q8VDH1 PaxDb:Q8VDH1 PRIDE:Q8VDH1
Ensembl:ENSMUST00000035579 GeneID:231670 KEGG:mmu:231670
UCSC:uc008zga.1 UCSC:uc008zgb.1 GeneTree:ENSGT00390000005653
InParanoid:Q8VDH1 NextBio:380699 Bgee:Q8VDH1 CleanEx:MM_FBXO21
Genevestigator:Q8VDH1 GermOnline:ENSMUSG00000032898 Uniprot:Q8VDH1
Length = 627
Score = 119 (46.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+
Sbjct: 503 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE 556
Score = 45 (20.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
Q K L+ L+A LQ+ D E+Y A DQ C
Sbjct: 175 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 206
>UNIPROTKB|E9PTD1 [details] [associations]
symbol:Fbxo21 "Protein Fbxo21" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001810 InterPro:IPR011722 Pfam:PF08755 PROSITE:PS50181
SMART:SM00992 RGD:1307346 GO:GO:0003677 SUPFAM:SSF81383 OMA:LNSYIHQ
SUPFAM:SSF141255 TIGRFAMs:TIGR02097 IPI:IPI00948387
Ensembl:ENSRNOT00000001491 ArrayExpress:E9PTD1 Uniprot:E9PTD1
Length = 627
Score = 119 (46.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+
Sbjct: 503 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE 556
Score = 45 (20.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
Q K L+ L+A LQ+ D E+Y A DQ C
Sbjct: 175 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 206
>UNIPROTKB|E2RKH1 [details] [associations]
symbol:FBXO21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001810 InterPro:IPR011722 Pfam:PF08755 SMART:SM00992
GO:GO:0003677 SUPFAM:SSF81383 CTD:23014 KO:K10301 OMA:LNSYIHQ
SUPFAM:SSF141255 TIGRFAMs:TIGR02097 GeneTree:ENSGT00390000005653
EMBL:AAEX03014715 EMBL:AAEX03014714 RefSeq:XP_543416.3
Ensembl:ENSCAFT00000014796 GeneID:486290 KEGG:cfa:486290
Uniprot:E2RKH1
Length = 620
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE 549
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
Q K L+ L+A LQ+ D E+Y A DQ C
Sbjct: 175 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 206
>UNIPROTKB|F1RKE9 [details] [associations]
symbol:FBXO21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001810
InterPro:IPR011722 Pfam:PF08755 SMART:SM00992 GO:GO:0003677
SUPFAM:SSF81383 CTD:23014 KO:K10301 OMA:LNSYIHQ SUPFAM:SSF141255
TIGRFAMs:TIGR02097 GeneTree:ENSGT00390000005653 EMBL:CT737179
RefSeq:NP_001231426.1 UniGene:Ssc.19193 Ensembl:ENSSSCT00000010806
GeneID:100157989 KEGG:ssc:100157989 Uniprot:F1RKE9
Length = 627
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE 556
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
Q K L+ L+A LQ+ D E+Y A DQ C
Sbjct: 175 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 206
>UNIPROTKB|O94952 [details] [associations]
symbol:FBXO21 "F-box only protein 21" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=NAS]
InterPro:IPR001810 InterPro:IPR011722 Pfam:PF08755 PROSITE:PS50181
SMART:SM00992 GO:GO:0003677 EMBL:CH471054 SUPFAM:SSF81383
GO:GO:0006511 GO:GO:0004842 GO:GO:0000151 EMBL:AC026368
EMBL:AF174601 EMBL:AB020682 EMBL:AK001699 EMBL:AC026364
EMBL:BC091496 EMBL:AL136899 IPI:IPI00025647 IPI:IPI00069507
RefSeq:NP_055817.1 RefSeq:NP_296373.1 UniGene:Hs.740376
ProteinModelPortal:O94952 SMR:O94952 IntAct:O94952 STRING:O94952
PhosphoSite:O94952 PaxDb:O94952 PRIDE:O94952
Ensembl:ENST00000330622 Ensembl:ENST00000427718 GeneID:23014
KEGG:hsa:23014 UCSC:uc001twj.3 UCSC:uc001twk.3 CTD:23014
GeneCards:GC12M117581 HGNC:HGNC:13592 MIM:609095 neXtProt:NX_O94952
PharmGKB:PA28034 eggNOG:COG2912 HOGENOM:HOG000065670
HOVERGEN:HBG051569 InParanoid:O94952 KO:K10301 OMA:LNSYIHQ
OrthoDB:EOG4JHCF6 PhylomeDB:O94952 GenomeRNAi:23014 NextBio:43940
ArrayExpress:O94952 Bgee:O94952 CleanEx:HS_FBXO21
Genevestigator:O94952 GermOnline:ENSG00000135108 SUPFAM:SSF141255
TIGRFAMs:TIGR02097 Uniprot:O94952
Length = 628
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE 556
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
Q K L+ L+A LQ+ D E+Y A DQ C
Sbjct: 175 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 206
>ZFIN|ZDB-GENE-100922-229 [details] [associations]
symbol:fbxo21 "F-box protein 21" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001810 InterPro:IPR011722 Pfam:PF08755 SMART:SM00256
SMART:SM00992 ZFIN:ZDB-GENE-100922-229 GO:GO:0003677
SUPFAM:SSF81383 SUPFAM:SSF141255 TIGRFAMs:TIGR02097
GeneTree:ENSGT00390000005653 EMBL:AL935185 EMBL:CT583689
IPI:IPI00613856 Ensembl:ENSDART00000111359 Bgee:E9QEU7
Uniprot:E9QEU7
Length = 611
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV 260
F G + HK GY VI G DP C S W+ +V +L +G QPFY VLV
Sbjct: 496 FSTGLIMKHKRSGYNCVIYGWDPKCTMSQEWINTMRVHQLSKGADQPFYNVLV 548
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 282 264 0.00092 114 3 11 22 0.43 33
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 614 (65 KB)
Total size of DFA: 199 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.15u 0.10s 23.25t Elapsed: 00:00:01
Total cpu time: 23.15u 0.10s 23.25t Elapsed: 00:00:01
Start: Fri May 10 02:08:48 2013 End: Fri May 10 02:08:49 2013