Query 023429
Match_columns 282
No_of_seqs 364 out of 1692
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:39:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 3.1E-30 1.1E-34 224.7 15.7 146 98-251 29-176 (256)
2 3htm_A Speckle-type POZ protei 100.0 4.2E-30 1.4E-34 210.5 14.4 140 98-245 32-171 (172)
3 3i3n_A Kelch-like protein 11; 100.0 1.1E-29 3.9E-34 223.9 12.3 149 98-251 30-184 (279)
4 3hqi_A Speckle-type POZ protei 100.0 7.1E-28 2.4E-32 215.6 14.7 140 98-245 172-311 (312)
5 4eoz_A Speckle-type POZ protei 99.9 3.3E-27 1.1E-31 187.9 7.3 123 98-228 23-145 (145)
6 2vkp_A BTB/POZ domain-containi 99.9 1.7E-24 5.6E-29 164.1 11.4 104 98-206 6-109 (109)
7 2if5_A Zinc finger and BTB dom 99.9 7.6E-24 2.6E-28 163.4 11.0 97 98-202 23-119 (120)
8 1r29_A B-cell lymphoma 6 prote 99.9 1.7E-23 6E-28 163.0 11.2 99 98-205 27-126 (127)
9 2z8h_A Transcription regulator 99.9 1.2E-23 4E-28 166.4 7.9 103 98-210 34-137 (138)
10 3b84_A Zinc finger and BTB dom 99.9 2.7E-23 9.4E-28 160.1 8.3 95 98-204 22-116 (119)
11 2ppi_A Gigaxonin; BTB domain, 99.9 2.8E-23 9.4E-28 165.5 8.4 97 98-202 45-143 (144)
12 2yy9_A Zinc finger and BTB dom 99.9 3.2E-23 1.1E-27 163.3 7.6 100 98-209 23-122 (135)
13 1buo_A POZ domain, protein (pr 99.9 1.6E-22 5.4E-27 156.3 11.3 95 98-205 26-120 (121)
14 2vpk_A Myoneurin; transcriptio 99.9 1.4E-22 4.7E-27 155.4 10.4 94 98-203 20-115 (116)
15 2q81_A MIZ-1 protein; BTB/POZ 99.9 3.6E-22 1.2E-26 153.9 7.5 93 98-203 25-117 (119)
16 3ohu_A Transcription regulator 99.9 6.4E-23 2.2E-27 159.3 2.7 95 98-202 30-125 (125)
17 3ga1_A Nucleus accumbens-assoc 99.9 2.1E-22 7.2E-27 157.3 4.8 96 98-205 31-127 (129)
18 2ihc_A Transcription regulator 99.9 1.2E-22 4.1E-27 157.7 2.5 96 98-203 27-123 (124)
19 3m5b_A Zinc finger and BTB dom 99.8 2.3E-21 7.8E-26 149.4 5.8 90 98-204 28-117 (119)
20 3fkc_A Transcriptional regulat 99.8 3E-20 1E-24 142.4 10.4 86 98-196 29-115 (116)
21 2ast_A S-phase kinase-associat 99.6 1.1E-14 3.7E-19 117.5 10.7 113 103-223 3-146 (159)
22 4ajy_C Transcription elongatio 99.4 1.1E-12 3.6E-17 97.0 9.1 81 103-191 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.3 1.5E-11 5.1E-16 97.0 8.7 97 103-211 4-126 (141)
24 2p1m_A SKP1-like protein 1A; F 99.2 5.6E-12 1.9E-16 101.6 2.3 110 103-223 6-145 (160)
25 1hv2_A Elongin C, ELC1; protei 98.8 1.5E-08 5.1E-13 74.7 8.2 80 103-191 6-99 (99)
26 3v7d_A Suppressor of kinetocho 98.8 5.6E-08 1.9E-12 78.7 11.0 109 102-218 8-148 (169)
27 2fnj_C Transcription elongatio 98.8 1.4E-08 4.6E-13 74.5 6.5 81 103-191 3-96 (96)
28 3drz_A BTB/POZ domain-containi 98.5 7.5E-07 2.6E-11 66.5 9.0 93 103-204 8-106 (107)
29 1vcb_B Protein (elongin C); tu 98.5 4.8E-07 1.6E-11 68.0 7.5 82 102-191 18-112 (112)
30 2eqx_A Kelch repeat and BTB do 98.4 3.6E-07 1.2E-11 68.0 4.9 49 203-251 5-53 (105)
31 3drx_A BTB/POZ domain-containi 97.5 0.00011 3.9E-09 60.4 4.9 93 103-204 14-112 (202)
32 3kvt_A Potassium channel prote 96.3 0.0009 3.1E-08 50.2 0.6 94 103-205 7-105 (115)
33 1s1g_A Potassium voltage-gated 95.9 0.0098 3.4E-07 45.1 4.8 90 102-203 14-110 (124)
34 1nn7_A Potassium channel KV4.2 95.5 0.0083 2.8E-07 44.1 3.1 88 103-202 2-96 (105)
35 2nz0_B Potassium voltage-gated 95.2 0.017 5.7E-07 44.8 4.1 82 102-195 36-122 (140)
36 1t1d_A Protein (potassium chan 95.2 0.011 3.7E-07 43.1 2.8 84 103-195 3-90 (100)
37 2eqx_A Kelch repeat and BTB do 86.4 0.84 2.9E-05 33.0 4.4 36 171-206 5-40 (105)
38 2vkp_A BTB/POZ domain-containi 84.1 0.86 2.9E-05 32.6 3.5 32 206-237 77-108 (109)
39 2r9r_B Paddle chimera voltage 74.7 3.1 0.00011 38.9 4.8 81 103-195 54-141 (514)
40 3htm_A Speckle-type POZ protei 74.1 2.9 9.8E-05 32.4 3.9 35 173-207 131-165 (172)
41 1r29_A B-cell lymphoma 6 prote 72.0 3 0.0001 30.7 3.4 32 206-237 95-126 (127)
42 2yy9_A Zinc finger and BTB dom 69.2 1.8 6.1E-05 32.5 1.5 36 206-241 87-122 (135)
43 2q81_A MIZ-1 protein; BTB/POZ 67.7 4.9 0.00017 29.2 3.7 30 206-235 88-117 (119)
44 1buo_A POZ domain, protein (pr 67.7 6.5 0.00022 28.6 4.4 32 206-237 89-120 (121)
45 2vpk_A Myoneurin; transcriptio 65.5 5.8 0.0002 28.5 3.7 30 206-235 86-115 (116)
46 3b84_A Zinc finger and BTB dom 65.5 3.1 0.0001 30.3 2.1 32 206-237 86-117 (119)
47 2if5_A Zinc finger and BTB dom 64.8 7.3 0.00025 28.1 4.1 29 206-234 91-119 (120)
48 3hqi_A Speckle-type POZ protei 62.3 6.3 0.00022 33.8 3.9 34 174-207 272-305 (312)
49 2ast_A S-phase kinase-associat 60.0 22 0.00076 27.3 6.4 63 175-239 50-127 (159)
50 2z8h_A Transcription regulator 59.7 1.9 6.5E-05 32.4 -0.0 33 206-238 101-133 (138)
51 1twf_L ABC10-alpha, DNA-direct 54.9 4.4 0.00015 27.1 1.2 27 28-54 25-53 (70)
52 1fs1_B SKP1, cyclin A/CDK2-ass 54.4 57 0.002 24.4 7.7 80 158-239 25-122 (141)
53 2ppi_A Gigaxonin; BTB domain, 51.5 6.5 0.00022 29.7 1.9 29 206-234 115-143 (144)
54 4eoz_A Speckle-type POZ protei 50.9 6.9 0.00024 29.1 1.9 34 206-239 91-124 (145)
55 3m5b_A Zinc finger and BTB dom 49.0 12 0.0004 27.3 2.9 31 206-236 87-117 (119)
56 3i3n_A Kelch-like protein 11; 41.4 20 0.00069 30.0 3.6 64 174-238 139-217 (279)
57 2plx_B Peptide inhibitor; heli 41.1 23 0.0008 17.9 2.3 21 213-233 3-23 (26)
58 3ga1_A Nucleus accumbens-assoc 37.3 4.5 0.00015 29.9 -1.1 33 205-237 95-127 (129)
59 3hve_A Gigaxonin; ubiquitin, c 37.3 25 0.00086 29.0 3.5 32 206-237 99-130 (256)
60 2kdx_A HYPA, hydrogenase/ureas 34.7 12 0.00042 27.4 1.0 30 26-55 68-99 (119)
61 2lcq_A Putative toxin VAPC6; P 33.8 11 0.00039 29.2 0.7 24 32-55 133-157 (165)
62 1wee_A PHD finger family prote 28.9 23 0.00079 23.3 1.5 34 18-52 3-37 (72)
63 2ds5_A CLPX, ATP-dependent CLP 24.5 33 0.0011 21.2 1.5 28 32-59 12-46 (51)
64 3oj3_I Tumor necrosis factor a 22.6 42 0.0014 20.4 1.6 26 32-57 19-46 (49)
65 2p1m_A SKP1-like protein 1A; F 22.2 48 0.0016 25.4 2.4 33 206-238 93-125 (160)
66 3a43_A HYPD, hydrogenase nicke 22.1 20 0.00067 27.2 0.1 19 27-45 66-84 (139)
67 1weo_A Cellulose synthase, cat 20.7 98 0.0034 21.5 3.4 27 29-55 14-52 (93)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=3.1e-30 Score=224.68 Aligned_cols=146 Identities=21% Similarity=0.359 Sum_probs=133.1
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccc--cCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCC
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEME--ESRSGTIKISDVSYDALRAFVNYLYTAEACLD 175 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~--e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~ 175 (282)
..+|||+|+|+ |+.|+|||.||+++|+||++||.+++. ++....|.++++++++|..+|+|+|||.+.++
T Consensus 29 ~~~~Dv~l~v~--------~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~ 100 (256)
T 3hve_A 29 SRFCDAHLVLD--------GEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLN 100 (256)
T ss_dssp -CCCCEEEEET--------TEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC
T ss_pred CCCcceEEEEC--------CEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCccc
Confidence 57999999999 899999999999999999999999877 67778999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCcHhHHHHHHHHHHhcCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhHHHhhCChhHHhhh
Q 023429 176 EQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYRELV 251 (282)
Q Consensus 176 ~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~~~~f~~L~ 251 (282)
.+++.+++.+|++|+++.|+..|+++|.+.++++||+.++.+|..|++..|.+.|.+||.+||..+..+++|.+|+
T Consensus 101 ~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~ 176 (256)
T 3hve_A 101 EDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELS 176 (256)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSC
T ss_pred HhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997
No 2
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=4.2e-30 Score=210.50 Aligned_cols=140 Identities=35% Similarity=0.544 Sum_probs=130.3
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|+|+ ++.|+|||.||+++|+||++||.++|.|+....|.++++++++|..+|+|+|+|.+.++.+
T Consensus 32 ~~~~Dv~l~v~--------~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~~ 103 (172)
T 3htm_A 32 SRFTDCCLCVA--------GQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK 103 (172)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGGG
T ss_pred CCCcceEEEEC--------CEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcHH
Confidence 46899999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHHhcCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhHHHhhCCh
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCE 245 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~~~ 245 (282)
++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|+++.|.+.|.+||.+||.+++.++
T Consensus 104 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 171 (172)
T 3htm_A 104 MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETS 171 (172)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998765
No 3
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=1.1e-29 Score=223.90 Aligned_cols=149 Identities=28% Similarity=0.473 Sum_probs=134.1
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeC------CCCHHHHHHHHHHHhCCC
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKIS------DVSYDALRAFVNYLYTAE 171 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~------di~~~~~~~lL~ylYtg~ 171 (282)
..+|||+|+|++.+ |+.|+|||.||+++|+||++||.++|.|+....|.++ ++++++|..+|+|+|||.
T Consensus 30 ~~~~Dv~l~v~~~~-----~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~ 104 (279)
T 3i3n_A 30 GLFCDITLCFGGAG-----GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGR 104 (279)
T ss_dssp TTTCCEEEECC---------CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSE
T ss_pred CCCCCeEEEEcCCC-----CeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCC
Confidence 57999999997211 7899999999999999999999999999999999998 899999999999999999
Q ss_pred CCCCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhcCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhHHHhhCChhHHhhh
Q 023429 172 ACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYRELV 251 (282)
Q Consensus 172 ~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~~~~f~~L~ 251 (282)
+.++.+++.+++.+|++|+++.|+..|.++|.+.++.+||+.++.+|..|++..|.+.|..||.+||.++..+++|.+|+
T Consensus 105 ~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~ 184 (279)
T 3i3n_A 105 IRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLP 184 (279)
T ss_dssp EEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSC
T ss_pred cccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
No 4
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.95 E-value=7.1e-28 Score=215.56 Aligned_cols=140 Identities=35% Similarity=0.544 Sum_probs=125.3
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..++||+|.|+ ++.|+|||.||+++|+||++||.++|.|+....|.|+++++++|+.+|+|+|+|.+.++..
T Consensus 172 ~~~~Dv~l~v~--------~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~ 243 (312)
T 3hqi_A 172 SRFTDCCLCVA--------GQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK 243 (312)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTHHH
T ss_pred CCCCceEEEEC--------CEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCChHH
Confidence 46899999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHHhcCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhHHHhhCCh
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCE 245 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~~~ 245 (282)
++.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++..|++.|++||..|+.+++.++
T Consensus 244 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 311 (312)
T 3hqi_A 244 MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETS 311 (312)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998765
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.94 E-value=3.3e-27 Score=187.88 Aligned_cols=123 Identities=38% Similarity=0.590 Sum_probs=93.2
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|+++ ++.|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|+|+|.+.++.+
T Consensus 23 ~~~~Dv~l~v~--------~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~ 94 (145)
T 4eoz_A 23 SRFTDCCLCVA--------GQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK 94 (145)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGGG
T ss_pred CCCcceEEEEC--------CEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCcHH
Confidence 46899999999 8999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHHhcCCHHHHHHHHHHHHHcChHHHHH
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLE 228 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~ 228 (282)
++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++.+|++
T Consensus 95 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 95 MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 999999999999999999999999999999999999999999999998864
No 6
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.91 E-value=1.7e-24 Score=164.15 Aligned_cols=104 Identities=35% Similarity=0.493 Sum_probs=90.7
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|+|+++ +.++.|+|||.||+++|+||++||.++|.|+. ..|.++++++++|+.+|+|+|+|.+.++.+
T Consensus 6 ~~~~Dv~l~v~~~----~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~ 80 (109)
T 2vkp_A 6 ELMADVHFVVGPP----GATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEAD 80 (109)
T ss_dssp CTTCCEEEEESST----TSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTT
T ss_pred CCcccEEEEECCC----CCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHH
Confidence 5799999999931 01289999999999999999999999999988 999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHHhcC
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLVSKL 206 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~~~l 206 (282)
++.+++.+|++|+++.|+..|+++|.+++
T Consensus 81 ~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 81 TVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998754
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.90 E-value=7.6e-24 Score=163.37 Aligned_cols=97 Identities=25% Similarity=0.394 Sum_probs=89.5
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|.++ ++.|+|||.||+++|+||++||.++|.|+....|.++++++++|+.+|+|+|||.+.++.+
T Consensus 23 ~~~~Dv~l~v~--------~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~ 94 (120)
T 2if5_A 23 GLLCDVVILVE--------GREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVSTA 94 (120)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCCGG
T ss_pred CCCCCeEEEEC--------CEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccCHH
Confidence 57999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHH
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFL 202 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l 202 (282)
++.+++.+|++|+++.|+..|+++|
T Consensus 95 ~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 95 NVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp GHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 9999999999999999999999987
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.90 E-value=1.7e-23 Score=162.96 Aligned_cols=99 Identities=23% Similarity=0.444 Sum_probs=94.6
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEe-CCCCHHHHHHHHHHHhCCCCCCCH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKI-SDVSYDALRAFVNYLYTAEACLDE 176 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l-~di~~~~~~~lL~ylYtg~~~~~~ 176 (282)
..+|||+|+++ ++.|+|||.||+++|+||++||.+++.| ....|.| +++++++|+.+|+|+|||.+.++.
T Consensus 27 ~~~~Dv~l~v~--------~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~ 97 (127)
T 1r29_A 27 DILTDVVIVVS--------REQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYTSRLNLRE 97 (127)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCT
T ss_pred CCCCCEEEEEC--------CEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCH
Confidence 57999999999 8999999999999999999999999988 7789999 999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCcHhHHHHHHHHHHhc
Q 023429 177 QLACDLLELAEKYQVKHLKAYCEKFLVSK 205 (282)
Q Consensus 177 ~~~~~ll~~A~~~~l~~L~~~c~~~l~~~ 205 (282)
+++.+++.+|++|+++.|+..|+++|.++
T Consensus 98 ~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 98 GNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999753
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.89 E-value=1.2e-23 Score=166.38 Aligned_cols=103 Identities=19% Similarity=0.322 Sum_probs=96.6
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeC-CCCHHHHHHHHHHHhCCCCCCCH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKIS-DVSYDALRAFVNYLYTAEACLDE 176 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~-di~~~~~~~lL~ylYtg~~~~~~ 176 (282)
..+|||+|+|+ ++.|+|||.||+++|+||++||.+++.+. ..|.++ ++++++|+.+|+|+|||.+.++.
T Consensus 34 ~~~~Dv~l~v~--------~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~ 103 (138)
T 2z8h_A 34 DVLCDVTVLVE--------GQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAYTAKLILSK 103 (138)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHHHSCCCCCT
T ss_pred CCCcCeEEEEC--------CEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhcCCCcccCH
Confidence 57999999999 89999999999999999999999988763 578885 89999999999999999999999
Q ss_pred HHHHHHHHHhhhcCcHhHHHHHHHHHHhcCCHHH
Q 023429 177 QLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDN 210 (282)
Q Consensus 177 ~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n 210 (282)
+++.+|+.+|++|+++.|+..|+++|.+.++.+|
T Consensus 104 ~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 104 DNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp TTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999888765
No 10
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.89 E-value=2.7e-23 Score=160.13 Aligned_cols=95 Identities=19% Similarity=0.304 Sum_probs=89.1
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|.++ |+.|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|||.+.++.+
T Consensus 22 ~~~~Dv~l~v~--------~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~ 89 (119)
T 3b84_A 22 GQYCDATLDVG--------GLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSG 89 (119)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCCCCCTT
T ss_pred CCCcceEEEEC--------CEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCCccCHH
Confidence 57999999999 89999999999999999999999876 5789999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHHh
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLVS 204 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~~ 204 (282)
++.+++.+|++|+++.|++.|+++|.+
T Consensus 90 ~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 90 NRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 999999999999999999999999875
No 11
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.89 E-value=2.8e-23 Score=165.50 Aligned_cols=97 Identities=23% Similarity=0.452 Sum_probs=89.6
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCcccc--CCcCeEEeCCCCHHHHHHHHHHHhCCCCCCC
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEE--SRSGTIKISDVSYDALRAFVNYLYTAEACLD 175 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e--~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~ 175 (282)
..+|||+|+|+ ++.|+|||.||+++|+||++||.+++.+ +....|.|+++++++|+.+|+|+|||.+.++
T Consensus 45 ~~~~Dv~l~v~--------~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~ 116 (144)
T 2ppi_A 45 SRFCDAHLVLD--------GEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLN 116 (144)
T ss_dssp -CCCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCC
T ss_pred CCCcceEEEEC--------CEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCC
Confidence 57999999999 8999999999999999999999988765 5678999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCcHhHHHHHHHHH
Q 023429 176 EQLACDLLELAEKYQVKHLKAYCEKFL 202 (282)
Q Consensus 176 ~~~~~~ll~~A~~~~l~~L~~~c~~~l 202 (282)
.+++.+|+.+|++|+++.|++.|+++|
T Consensus 117 ~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 117 EDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 999999999999999999999999876
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.88 E-value=3.2e-23 Score=163.32 Aligned_cols=100 Identities=18% Similarity=0.265 Sum_probs=87.4
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|+|+ ++.|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|+|||.+.++.+
T Consensus 23 ~~~~Dv~l~v~--------~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~ 90 (135)
T 2yy9_A 23 GQYCDATLDVG--------GLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSG 90 (135)
T ss_dssp TTTCCEEEEET--------TEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCCCCCTT
T ss_pred CCCcceEEEEC--------CEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Confidence 57999999999 89999999999999999999999876 5689999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHHhcCCHH
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLVSKLNWD 209 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~ 209 (282)
++.+|+.+|++|+++.|++.|+++|.+.+...
T Consensus 91 ~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 91 NRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999998776543
No 13
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.88 E-value=1.6e-22 Score=156.28 Aligned_cols=95 Identities=25% Similarity=0.347 Sum_probs=89.8
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|.++ ++.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||.+.++.+
T Consensus 26 ~~~~Dv~l~v~--------~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~ 92 (121)
T 1buo_A 26 GTLCDVVIMVD--------SQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTATLQAKAE 92 (121)
T ss_dssp TTTCCEEEEES--------SCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSCCCCCGG
T ss_pred CCCCCEEEEEC--------CEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCCcCCCHH
Confidence 57999999999 8999999999999999999999863 4689999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHHhc
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLVSK 205 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~~~ 205 (282)
++.+++.+|++|+++.|+..|+++|.+.
T Consensus 93 ~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 93 DLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp GHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999764
No 14
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.88 E-value=1.4e-22 Score=155.39 Aligned_cols=94 Identities=20% Similarity=0.328 Sum_probs=88.5
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeC--CCCHHHHHHHHHHHhCCCCCCC
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKIS--DVSYDALRAFVNYLYTAEACLD 175 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~--di~~~~~~~lL~ylYtg~~~~~ 175 (282)
..+|||+|+++ ++.|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+|||.+.++
T Consensus 20 ~~~~Dv~l~v~--------~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~ 87 (116)
T 2vpk_A 20 GFLCDCTIVIG--------EFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNLD 87 (116)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCC
T ss_pred CCCCcEEEEEC--------CEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCcccC
Confidence 57999999999 8999999999999999999999876 35678888 9999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCcHhHHHHHHHHHH
Q 023429 176 EQLACDLLELAEKYQVKHLKAYCEKFLV 203 (282)
Q Consensus 176 ~~~~~~ll~~A~~~~l~~L~~~c~~~l~ 203 (282)
.+++.+++.+|++|+++.|+..|+++|.
T Consensus 88 ~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 88 SWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999999985
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.86 E-value=3.6e-22 Score=153.86 Aligned_cols=93 Identities=24% Similarity=0.356 Sum_probs=87.4
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|+++ ++.|+|||.||+++|+||++||.+ ....|.++++++++|+.+|+|+|||.+.++.+
T Consensus 25 ~~~~Dv~l~v~--------~~~~~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~ 91 (119)
T 2q81_A 25 GLLCDCTFVVD--------GVHFKAHKAVLAACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYTAKLSLSPE 91 (119)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHHSCCCCCTT
T ss_pred CCCcceEEEEC--------CEEEehhHHHHHHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcCCCCccCHH
Confidence 57999999999 899999999999999999999986 24578889999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHH
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLV 203 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~ 203 (282)
++.+++.+|++|+++.|++.|+++|.
T Consensus 92 ~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 92 NVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999999985
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.86 E-value=6.4e-23 Score=159.31 Aligned_cols=95 Identities=23% Similarity=0.360 Sum_probs=89.2
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCC-CCHHHHHHHHHHHhCCCCCCCH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISD-VSYDALRAFVNYLYTAEACLDE 176 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~d-i~~~~~~~lL~ylYtg~~~~~~ 176 (282)
..+|||+|+|+ ++.|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+|+|||.+.++.
T Consensus 30 ~~~~Dv~l~v~--------~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~ 99 (125)
T 3ohu_A 30 DILCDVTLIVE--------RKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTAKLLLSR 99 (125)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTSEEEECT
T ss_pred CCccceEEEEC--------CEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCCceEECH
Confidence 57999999999 8999999999999999999999998876 67899998 9999999999999999999999
Q ss_pred HHHHHHHHHhhhcCcHhHHHHHHHHH
Q 023429 177 QLACDLLELAEKYQVKHLKAYCEKFL 202 (282)
Q Consensus 177 ~~~~~ll~~A~~~~l~~L~~~c~~~l 202 (282)
+++.+++.+|++|+++.|++.|+++|
T Consensus 100 ~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 100 ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 99999999999999999999987653
No 17
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.85 E-value=2.1e-22 Score=157.30 Aligned_cols=96 Identities=22% Similarity=0.360 Sum_probs=83.9
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeC-CCCHHHHHHHHHHHhCCCCCCCH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKIS-DVSYDALRAFVNYLYTAEACLDE 176 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~-di~~~~~~~lL~ylYtg~~~~~~ 176 (282)
..+|||+|.|+ ++.|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+|||.+.++.
T Consensus 31 ~~~~Dv~l~v~--------~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~ 98 (129)
T 3ga1_A 31 GLYCDVSVVVK--------GHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTGRLSMNV 98 (129)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHSEEECCT
T ss_pred CCCcceEEEEC--------CEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCCccccCH
Confidence 56999999998 8999999999999999999999875 56789997 99999999999999999999999
Q ss_pred HHHHHHHHHhhhcCcHhHHHHHHHHHHhc
Q 023429 177 QLACDLLELAEKYQVKHLKAYCEKFLVSK 205 (282)
Q Consensus 177 ~~~~~ll~~A~~~~l~~L~~~c~~~l~~~ 205 (282)
+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 99 ~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 99 GDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp TTHHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999864
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.85 E-value=1.2e-22 Score=157.66 Aligned_cols=96 Identities=20% Similarity=0.359 Sum_probs=86.9
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeC-CCCHHHHHHHHHHHhCCCCCCCH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKIS-DVSYDALRAFVNYLYTAEACLDE 176 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~-di~~~~~~~lL~ylYtg~~~~~~ 176 (282)
..+|||+|+|+ |+.|+|||.||+++|+||++||.+++.++ ..|.++ ++++++|+.+|+|+|||.+.++.
T Consensus 27 ~~~~Dv~l~v~--------~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~ 96 (124)
T 2ihc_A 27 DVLCDVTIFVE--------GQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAYTAKLILSK 96 (124)
T ss_dssp TCSCCEEEEET--------TEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHHHSEEEEET
T ss_pred CCCcCEEEEEC--------CEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhcCCCcccCH
Confidence 57999999999 89999999999999999999999988764 578885 89999999999999999999999
Q ss_pred HHHHHHHHHhhhcCcHhHHHHHHHHHH
Q 023429 177 QLACDLLELAEKYQVKHLKAYCEKFLV 203 (282)
Q Consensus 177 ~~~~~ll~~A~~~~l~~L~~~c~~~l~ 203 (282)
+++.+++.+|++|+++.|+..|+++|.
T Consensus 97 ~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 97 ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.83 E-value=2.3e-21 Score=149.39 Aligned_cols=90 Identities=21% Similarity=0.253 Sum_probs=83.1
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
..+|||+|+|+ |+.|+|||.||+++|+||++ ....|.++++++++|+.+|+|+|||.+.++.+
T Consensus 28 ~~~~Dv~l~v~--------~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~ 90 (119)
T 3m5b_A 28 PALCDTLITVG--------SQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGESVELQPG 90 (119)
T ss_dssp TTTCCEEEEET--------TEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCCEEECGG
T ss_pred CCCcceEEEEC--------CEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHH
Confidence 46999999999 89999999999999999974 34678999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCcHhHHHHHHHHHHh
Q 023429 178 LACDLLELAEKYQVKHLKAYCEKFLVS 204 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~~~c~~~l~~ 204 (282)
++.+++.+|++|+++.|++.|++++.+
T Consensus 91 ~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 91 ELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp GHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 999999999999999999999998764
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.82 E-value=3e-20 Score=142.41 Aligned_cols=86 Identities=20% Similarity=0.374 Sum_probs=81.1
Q ss_pred CccccEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCCC-CCCH
Q 023429 98 PCYTDVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEA-CLDE 176 (282)
Q Consensus 98 ~~~sDv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~-~~~~ 176 (282)
..+|||+|.|+ ++.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||.+ .++.
T Consensus 29 ~~~~Dv~l~v~--------~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~ 95 (116)
T 3fkc_A 29 GLFCDVTVIVE--------DRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSKIVRVRS 95 (116)
T ss_dssp TTTCCEEEEET--------TEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSCCCSCCH
T ss_pred CCceeEEEEEC--------CEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCCcCCCCH
Confidence 57999999999 8999999999999999999999874 57899999999999999999999999 7999
Q ss_pred HHHHHHHHHhhhcCcHhHHH
Q 023429 177 QLACDLLELAEKYQVKHLKA 196 (282)
Q Consensus 177 ~~~~~ll~~A~~~~l~~L~~ 196 (282)
+++.+++.+|++|+++.|++
T Consensus 96 ~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 96 DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHHHHHHHHhCccccCc
Confidence 99999999999999999874
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.57 E-value=1.1e-14 Score=117.48 Aligned_cols=113 Identities=13% Similarity=0.212 Sum_probs=91.6
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcC-ccc-cCCcCeEEeCCCCHHHHHHHHHHHhCCC---------
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDN-EME-ESRSGTIKISDVSYDALRAFVNYLYTAE--------- 171 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~-~~~-e~~~~~i~l~di~~~~~~~lL~ylYtg~--------- 171 (282)
|+|+..+ |..|.||+.+ ++.|+||++||.+ ++. |+....|.|++++..++..+++|+|++.
T Consensus 3 v~L~ssD-------g~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~ 74 (159)
T 2ast_A 3 IKLQSSD-------GEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDD 74 (159)
T ss_dssp EEEECTT-------SCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----
T ss_pred EEEEcCC-------CCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccc
Confidence 6776654 8999999999 8999999999988 666 6777899999999999999999999987
Q ss_pred -----------------CCCCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhcC---CHHHHHHHHHHHHHcCh
Q 023429 172 -----------------ACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKL---NWDNSVVNYAFAHQHNA 223 (282)
Q Consensus 172 -----------------~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l---~~~n~~~~l~~A~~~~~ 223 (282)
+.++..++.+|+.+|++|++..|.++|..++...+ +++.+-.++.+...+..
T Consensus 75 ~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~ 146 (159)
T 2ast_A 75 ENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 146 (159)
T ss_dssp ------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCT
T ss_pred cccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence 67888999999999999999999999999997655 45555555555444443
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.40 E-value=1.1e-12 Score=96.96 Aligned_cols=81 Identities=20% Similarity=0.289 Sum_probs=66.6
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcC--ccccCCcCeEEeCCCCHHHHHHHHHHHh-----C---CCC
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDN--EMEESRSGTIKISDVSYDALRAFVNYLY-----T---AEA 172 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~--~~~e~~~~~i~l~di~~~~~~~lL~ylY-----t---g~~ 172 (282)
|+|+..+ |..|.|||.+ |..|+||++||.+ .+.|+....|.|+++++.+++.+++|+| + +.+
T Consensus 4 v~L~SsD-------g~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i 75 (97)
T 4ajy_C 4 VKLISSD-------GHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEI 75 (97)
T ss_dssp EEEECTT-------CCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred EEEEecC-------CcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCC
Confidence 5666654 8999999999 9999999999987 6778778899999999999999999999 5 666
Q ss_pred C---CCHHHHHHHHHHhhhcCc
Q 023429 173 C---LDEQLACDLLELAEKYQV 191 (282)
Q Consensus 173 ~---~~~~~~~~ll~~A~~~~l 191 (282)
+ ++.+++.+|+.+|++|++
T Consensus 76 ~~~~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 76 PEFPIAPEIALELLMAANFLDC 97 (97)
T ss_dssp CCCCCCGGGHHHHHHHHHHHTC
T ss_pred CcCcCCHHHHHHHHHHHhhhCC
Confidence 6 889999999999999874
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.26 E-value=1.5e-11 Score=96.98 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=81.4
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCC-----------
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAE----------- 171 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~----------- 171 (282)
|+|+..+ |..|.+|+.+ +..|++|++||... + ...|.|++++..+++.+++|+|...
T Consensus 4 v~L~SsD-------g~~f~v~~~v-A~~S~~ik~ml~~~---~-~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~ 71 (141)
T 1fs1_B 4 IKLQSSD-------GEIFEVDVEI-AKQSVTIKTMLEDL---G-MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDEN 71 (141)
T ss_dssp EEEECTT-------SCEEEEEGGG-GGTCHHHHHHHHHT---C-CSSEECTTCCHHHHHHHHHHHHHHTTCC--------
T ss_pred EEEEeCC-------CCEEEecHHH-HHHhHHHHHHHHhc---C-CCceecCCcCHHHHHHHHHHHHHhccCCCccccccc
Confidence 6777765 8999999998 88999999999753 1 4689999999999999999999765
Q ss_pred ---------------CCCCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhcCCHHHH
Q 023429 172 ---------------ACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNS 211 (282)
Q Consensus 172 ---------------~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~ 211 (282)
+.++..++.+|+.||+++++..|.++|.+++...+...+.
T Consensus 72 ~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ 126 (141)
T 1fs1_B 72 KEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTP 126 (141)
T ss_dssp ---------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCH
T ss_pred cccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCH
Confidence 5667788899999999999999999999988876654443
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.18 E-value=5.6e-12 Score=101.57 Aligned_cols=110 Identities=13% Similarity=0.213 Sum_probs=62.7
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCC-----------
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAE----------- 171 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~----------- 171 (282)
|+|+..+ |..|.+|+.+ |..|++|++||.... ....|.|++++..+++.+++|+|+..
T Consensus 6 v~L~SsD-------g~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~ 74 (160)
T 2p1m_A 6 IVLKSSD-------GESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVE 74 (160)
T ss_dssp --CCC----------------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC----------------
T ss_pred EEEEcCC-------CCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCccccccc
Confidence 5555544 8999999998 789999999998642 34589999999999999999999875
Q ss_pred ----------------CCCCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhcC---CHHHHHHHHHHHHHcCh
Q 023429 172 ----------------ACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKL---NWDNSVVNYAFAHQHNA 223 (282)
Q Consensus 172 ----------------~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l---~~~n~~~~l~~A~~~~~ 223 (282)
+.++..++.+|+.||++|++..|.++|..++...+ +++.+..++.+...+.-
T Consensus 75 ~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~ 145 (160)
T 2p1m_A 75 GAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTP 145 (160)
T ss_dssp --------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCH
T ss_pred ccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence 34667889999999999999999999999999888 67777777666555543
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.81 E-value=1.5e-08 Score=74.71 Aligned_cols=80 Identities=21% Similarity=0.315 Sum_probs=67.8
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccccCCcCeEEeCCCCHHHHHHHHHHHhCCC-----------
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAE----------- 171 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~----------- 171 (282)
|+|+..+ |..|.+++.+ |..|.+++.|+..++ +.....|.|++++..+++.+++|+|...
T Consensus 6 v~L~SsD-------g~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~ 76 (99)
T 1hv2_A 6 VTLVSKD-------DKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDE 76 (99)
T ss_dssp EEEEETT-------TEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSS
T ss_pred EEEEecC-------CCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCcccccc
Confidence 5666654 9999999997 789999999998765 5555789999999999999999998643
Q ss_pred ---CCCCHHHHHHHHHHhhhcCc
Q 023429 172 ---ACLDEQLACDLLELAEKYQV 191 (282)
Q Consensus 172 ---~~~~~~~~~~ll~~A~~~~l 191 (282)
..++...+.+|+.||+++++
T Consensus 77 i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 77 IPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHCC
T ss_pred CCCccCCHHHHHHHHHHHHHhCc
Confidence 35678899999999999875
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.77 E-value=5.6e-08 Score=78.67 Aligned_cols=109 Identities=15% Similarity=0.219 Sum_probs=81.0
Q ss_pred cEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCccc----cCCcCeEEeCCCCHHHHHHHHHHHhCCC------
Q 023429 102 DVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNEME----ESRSGTIKISDVSYDALRAFVNYLYTAE------ 171 (282)
Q Consensus 102 Dv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~~~----e~~~~~i~l~di~~~~~~~lL~ylYtg~------ 171 (282)
-|+|+..+ |..|.+++.+ +..|.+++.|+..... +.....|.|++++..++..+++|++...
T Consensus 8 ~i~L~SsD-------G~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~ 79 (169)
T 3v7d_A 8 NVVLVSGE-------GERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPD 79 (169)
T ss_dssp EEEEECTT-------CCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC
T ss_pred eEEEEeCC-------CCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcc
Confidence 46676665 9999999998 6789999999975322 1234789999999999999999997643
Q ss_pred -------------------CCCCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhc---CCHHHHHHHHHHH
Q 023429 172 -------------------ACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSK---LNWDNSVVNYAFA 218 (282)
Q Consensus 172 -------------------~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~---l~~~n~~~~l~~A 218 (282)
+.++...+.+|+.||++|++..|.++|...+... -+++.+-.++.+.
T Consensus 80 ~~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~ 148 (169)
T 3v7d_A 80 EDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIV 148 (169)
T ss_dssp --------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCC
T ss_pred cccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 2345578889999999999999999988888543 3455554444443
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.76 E-value=1.4e-08 Score=74.53 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=63.7
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcC--ccccCCcCeEEeCCCCHHHHHHHHHHHhCCC---------
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDN--EMEESRSGTIKISDVSYDALRAFVNYLYTAE--------- 171 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~--~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~--------- 171 (282)
|+|+..+ |..|.+++.+ |..|.+++.|+.. .+.|+....|.|++++..+++.+++|+|...
T Consensus 3 v~L~SsD-------g~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i 74 (96)
T 2fnj_C 3 VKLISSD-------GHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEI 74 (96)
T ss_dssp EEEECTT-------SCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCC
T ss_pred EEEEecC-------CCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccC
Confidence 5666654 9999999997 7899999999985 2356666799999999999999999998643
Q ss_pred --CCCCHHHHHHHHHHhhhcCc
Q 023429 172 --ACLDEQLACDLLELAEKYQV 191 (282)
Q Consensus 172 --~~~~~~~~~~ll~~A~~~~l 191 (282)
..++...+.+|+.||+++++
T Consensus 75 ~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 75 PEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCCCCCTTTHHHHHHHHHHHTC
T ss_pred CCcccCHHHHHHHHHHHHHhCc
Confidence 35677899999999999875
No 28
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.48 E-value=7.5e-07 Score=66.47 Aligned_cols=93 Identities=16% Similarity=0.225 Sum_probs=75.7
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcC-HHHHHhhcCccc----cCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRS-PVFKAMLDNEME----ESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S-~yF~~mf~~~~~----e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
|+|.|| |+.|...+..|.... .+|.+||.+... ....+.+-+ |-++..|+.+|+|+.+|.+.++.+
T Consensus 8 v~LNVG--------G~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~ 78 (107)
T 3drz_A 8 VRLNVG--------GTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD 78 (107)
T ss_dssp EEEEET--------TEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTT
T ss_pred EEEEEC--------CEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCC
Confidence 688999 999999999998765 588999876421 113355655 789999999999999999887543
Q ss_pred -HHHHHHHHhhhcCcHhHHHHHHHHHHh
Q 023429 178 -LACDLLELAEKYQVKHLKAYCEKFLVS 204 (282)
Q Consensus 178 -~~~~ll~~A~~~~l~~L~~~c~~~l~~ 204 (282)
....++.-|.+|+++.|++.|.+.|.+
T Consensus 79 ~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 79 LAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 347899999999999999999988764
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.45 E-value=4.8e-07 Score=68.03 Aligned_cols=82 Identities=17% Similarity=0.224 Sum_probs=63.8
Q ss_pred cEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcC--ccccCCcCeEEeCCCCHHHHHHHHHHHhCCC--------
Q 023429 102 DVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDN--EMEESRSGTIKISDVSYDALRAFVNYLYTAE-------- 171 (282)
Q Consensus 102 Dv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~--~~~e~~~~~i~l~di~~~~~~~lL~ylYtg~-------- 171 (282)
-|+|+..+ |..|.+++.+ +..|..++.|+.. .+.|.....|.|++++..+++.+++|++...
T Consensus 18 ~v~L~SsD-------G~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~ 89 (112)
T 1vcb_B 18 YVKLISSD-------GHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTE 89 (112)
T ss_dssp EEEEECTT-------SCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEEcCC-------CCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCC
Confidence 36666554 9999999995 6889999999985 2445556789999999999999999997532
Q ss_pred ---CCCCHHHHHHHHHHhhhcCc
Q 023429 172 ---ACLDEQLACDLLELAEKYQV 191 (282)
Q Consensus 172 ---~~~~~~~~~~ll~~A~~~~l 191 (282)
..++...+.+|+.||++|++
T Consensus 90 i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 90 IPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCcccCHHHHHHHHHHHHHhCc
Confidence 35778999999999999875
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=3.6e-07 Score=68.00 Aligned_cols=49 Identities=22% Similarity=0.265 Sum_probs=46.9
Q ss_pred HhcCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhHHHhhCChhHHhhh
Q 023429 203 VSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYRELV 251 (282)
Q Consensus 203 ~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~~~~f~~L~ 251 (282)
.+.++++||+.++.+|..|+++.|.+.|.+||.+||.++.++++|.+|+
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~ 53 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLP 53 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSC
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCC
Confidence 4568999999999999999999999999999999999999999999998
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.46 E-value=0.00011 Score=60.37 Aligned_cols=93 Identities=16% Similarity=0.225 Sum_probs=73.8
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcC-HHHHHhhcCcc--c--cCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRS-PVFKAMLDNEM--E--ESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S-~yF~~mf~~~~--~--e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
|+|.|| |..|...+..|.... .+|..||.+.. . ....+.+-+ |-++..|+.||+|+-+|.+.++.+
T Consensus 14 V~LNVG--------G~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~ 84 (202)
T 3drx_A 14 VRLNVG--------GTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD 84 (202)
T ss_dssp EEEEET--------TEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTT
T ss_pred EEEEEC--------CEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCC
Confidence 578999 999999999998754 47888887642 1 112345555 679999999999999999987543
Q ss_pred -HHHHHHHHhhhcCcHhHHHHHHHHHHh
Q 023429 178 -LACDLLELAEKYQVKHLKAYCEKFLVS 204 (282)
Q Consensus 178 -~~~~ll~~A~~~~l~~L~~~c~~~l~~ 204 (282)
....++.-|.+|+|+.|...|.+.|.+
T Consensus 85 ~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 85 LAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 346799999999999999999998864
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.26 E-value=0.0009 Score=50.20 Aligned_cols=94 Identities=11% Similarity=0.095 Sum_probs=68.1
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcC-HHHHHhhcCcc-ccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH-HH
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRS-PVFKAMLDNEM-EESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ-LA 179 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S-~yF~~mf~~~~-~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~-~~ 179 (282)
|+|.|| |..|...+..|.... ..+..|+.+.. .....+.+-+ |-++..|+.+|+|+-+|.+.++.. .+
T Consensus 7 V~LNVG--------G~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~ 77 (115)
T 3kvt_A 7 VIINVG--------GIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCG 77 (115)
T ss_dssp EEEEET--------TEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCH
T ss_pred EEEEEC--------CEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccH
Confidence 688999 999999999998753 34566665421 1223456655 679999999999999999877553 46
Q ss_pred HHHHHHhhhcCcHhHH--HHHHHHHHhc
Q 023429 180 CDLLELAEKYQVKHLK--AYCEKFLVSK 205 (282)
Q Consensus 180 ~~ll~~A~~~~l~~L~--~~c~~~l~~~ 205 (282)
..++.-|.+|+|+... .-|...+.+.
T Consensus 78 ~~~~~Ea~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 78 PLFEEELEFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp HHHHHHHHHHTCCGGGBCGGGSHHHHSC
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHhc
Confidence 7899999999998765 2354444443
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.87 E-value=0.0098 Score=45.09 Aligned_cols=90 Identities=11% Similarity=0.092 Sum_probs=64.7
Q ss_pred cEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCc----cccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 102 DVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNE----MEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 102 Dv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~----~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
=|+|.|| |..|..-+..|.... .++|... ......+.+-+ |-++..|+.||+|+-+|.+.++..
T Consensus 14 ~V~LNVG--------G~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~ 81 (124)
T 1s1g_A 14 LIVLNVS--------GRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY 81 (124)
T ss_dssp EEEEEET--------TEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT
T ss_pred EEEEEeC--------CEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC
Confidence 3688999 999999999997642 2334331 11123355655 669999999999999999887543
Q ss_pred -HHHHHHHHhhhcCcHhHH--HHHHHHHH
Q 023429 178 -LACDLLELAEKYQVKHLK--AYCEKFLV 203 (282)
Q Consensus 178 -~~~~ll~~A~~~~l~~L~--~~c~~~l~ 203 (282)
.+..++.-|++|+|+.+. ..|...+.
T Consensus 82 ~~~~~l~~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 82 ECISAYDDELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp SCHHHHHHHHHHTTCCGGGBCHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 478899999999999874 44444443
No 34
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=95.52 E-value=0.0083 Score=44.10 Aligned_cols=88 Identities=13% Similarity=0.121 Sum_probs=62.9
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCc----cccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH-
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNE----MEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ- 177 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~----~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~- 177 (282)
|+|.|| |..|...+..|..... +||... ......+.+-+ |-++..|+.+|+|+-+|.+.++..
T Consensus 2 V~LNVG--------G~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~ 69 (105)
T 1nn7_A 2 IVLNVS--------GTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHE 69 (105)
T ss_dssp EEEEET--------TEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTS
T ss_pred EEEEEC--------CEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCc
Confidence 688999 9999999999976432 234331 11122345555 669999999999999999877543
Q ss_pred HHHHHHHHhhhcCcHhHH--HHHHHHH
Q 023429 178 LACDLLELAEKYQVKHLK--AYCEKFL 202 (282)
Q Consensus 178 ~~~~ll~~A~~~~l~~L~--~~c~~~l 202 (282)
.+..++.-|++|+++.+. .-|....
T Consensus 70 ~~~~l~~Ea~fy~i~~l~~~~cc~~~~ 96 (105)
T 1nn7_A 70 CISAYDEELAFFGLIPEIIGDCCYEEY 96 (105)
T ss_dssp CHHHHHHHHHHHTCCSCCBCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 467899999999998863 3444433
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=95.25 E-value=0.017 Score=44.76 Aligned_cols=82 Identities=11% Similarity=0.086 Sum_probs=61.2
Q ss_pred cEEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcCc----cccCCcCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Q 023429 102 DVVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDNE----MEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQ 177 (282)
Q Consensus 102 Dv~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~~----~~e~~~~~i~l~di~~~~~~~lL~ylYtg~~~~~~~ 177 (282)
=|+|.|| |..|...+..|.... ..||... ......+.+-+ |-++..|+.||+|+-+|.+.++.+
T Consensus 36 ~V~LNVG--------G~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~ 103 (140)
T 2nz0_B 36 LIVLNVS--------GRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY 103 (140)
T ss_dssp EEEEEET--------TEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT
T ss_pred EEEEEEC--------CEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC
Confidence 4788999 999999999997642 2344331 11123355555 669999999999999999887543
Q ss_pred -HHHHHHHHhhhcCcHhHH
Q 023429 178 -LACDLLELAEKYQVKHLK 195 (282)
Q Consensus 178 -~~~~ll~~A~~~~l~~L~ 195 (282)
.+..++.-|++|+|+.+.
T Consensus 104 ~~~~~l~eEa~fy~i~~l~ 122 (140)
T 2nz0_B 104 ECISAYDDELAFYGILPEI 122 (140)
T ss_dssp SCHHHHHHHHHHHTCCGGG
T ss_pred cCHHHHHHHHHHcCCChHH
Confidence 478899999999998873
No 36
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.21 E-value=0.011 Score=43.07 Aligned_cols=84 Identities=8% Similarity=0.011 Sum_probs=60.1
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcC-HHHHHhhcC-ccccCCcCeEEeCCCCHHHHHHHHHHHhC-CCCCCCH-HH
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRS-PVFKAMLDN-EMEESRSGTIKISDVSYDALRAFVNYLYT-AEACLDE-QL 178 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S-~yF~~mf~~-~~~e~~~~~i~l~di~~~~~~~lL~ylYt-g~~~~~~-~~ 178 (282)
|+|.|| |..|...+..|...- ..+.+|+.. .......+.+-+ |-++..|+.+|+|+-+ |.+..+. ..
T Consensus 3 v~LNVG--------G~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~ 73 (100)
T 1t1d_A 3 VVINVS--------GLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVP 73 (100)
T ss_dssp EEEEET--------TEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSC
T ss_pred EEEEEC--------CEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCC
Confidence 688999 999999999996542 122233321 111223456666 6799999999999998 8887654 34
Q ss_pred HHHHHHHhhhcCcHhHH
Q 023429 179 ACDLLELAEKYQVKHLK 195 (282)
Q Consensus 179 ~~~ll~~A~~~~l~~L~ 195 (282)
+..++.-|.+|+++.+.
T Consensus 74 ~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 74 LDVFSEEIKFYELGENA 90 (100)
T ss_dssp HHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHcCCCHHH
Confidence 67899999999998765
No 37
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.41 E-value=0.84 Score=32.95 Aligned_cols=36 Identities=11% Similarity=0.076 Sum_probs=31.9
Q ss_pred CCCCCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhcC
Q 023429 171 EACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKL 206 (282)
Q Consensus 171 ~~~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l 206 (282)
.-.++.+|...++.+|+.|+++.|...|..|+.++.
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF 40 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 345788999999999999999999999999998654
No 38
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=84.13 E-value=0.86 Score=32.64 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHh
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDN 237 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 237 (282)
++.+|+..++..|..++.+.|.+.|.+|+.++
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 67789999999999999999999999999875
No 39
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=74.67 E-value=3.1 Score=38.93 Aligned_cols=81 Identities=11% Similarity=0.073 Sum_probs=58.7
Q ss_pred EEEEccCCCCCCCCCeeEehhHHHHhhcCHHHHHhhcC-----ccccCCcCeEEeCCCCHHHHHHHHHHHhC-CCCCCCH
Q 023429 103 VVLVAASESGPAGPAVPVPAHKAVLVSRSPVFKAMLDN-----EMEESRSGTIKISDVSYDALRAFVNYLYT-AEACLDE 176 (282)
Q Consensus 103 v~l~v~~~~~~~~~~~~~~aHk~iLa~~S~yF~~mf~~-----~~~e~~~~~i~l~di~~~~~~~lL~ylYt-g~~~~~~ 176 (282)
|+|-|| |..|...+..|...- .+++.. .......+++-+ |=++..|+.+|+|+.+ |.+..+.
T Consensus 54 v~lNVg--------G~~f~t~~~tL~~~p---~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~ 121 (514)
T 2r9r_B 54 VVINIS--------GLRFETQLKTLAQFP---ETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPV 121 (514)
T ss_dssp EEEEET--------TEEEEEEHHHHTTST---TSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCT
T ss_pred EEEEeC--------CEEEEecHHHHhcCC---CCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCC
Confidence 678999 999999999996532 222322 111223456666 6799999999999999 9987654
Q ss_pred H-HHHHHHHHhhhcCcHhHH
Q 023429 177 Q-LACDLLELAEKYQVKHLK 195 (282)
Q Consensus 177 ~-~~~~ll~~A~~~~l~~L~ 195 (282)
+ ....+..-|++|+++++.
T Consensus 122 ~~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 122 NVPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp TSCHHHHHHHHHHTTCCHHH
T ss_pred cccHHHHHHHHHhcCCCHHH
Confidence 3 355688899999998765
No 40
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=74.12 E-value=2.9 Score=32.37 Aligned_cols=35 Identities=23% Similarity=0.257 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhcCC
Q 023429 173 CLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLN 207 (282)
Q Consensus 173 ~~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~ 207 (282)
.++.+++..++.+|..|+++.|+..|.++|.+++.
T Consensus 131 ~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 131 NLSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred hCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 35668999999999999999999999999997653
No 41
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=72.03 E-value=3 Score=30.65 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHh
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDN 237 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 237 (282)
++.+++..++..|..++.+.|.+.|.+|+.++
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 56789999999999999999999999998753
No 42
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=69.23 E-value=1.8 Score=32.50 Aligned_cols=36 Identities=14% Similarity=-0.018 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhHHHh
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKL 241 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v 241 (282)
++.+|+..++..|..++.+.|.+.|.+|+.+++...
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 677899999999999999999999999998887643
No 43
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=67.68 E-value=4.9 Score=29.19 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHH
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLIT 235 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 235 (282)
++.+|+..++..|..++.+.|.+.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 677899999999999999999999999874
No 44
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=67.66 E-value=6.5 Score=28.56 Aligned_cols=32 Identities=13% Similarity=-0.039 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHh
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDN 237 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 237 (282)
++.+|+..++..|..++.+.|.+.|.+|+.+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999999998753
No 45
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=65.52 E-value=5.8 Score=28.53 Aligned_cols=30 Identities=10% Similarity=-0.082 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHH
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLIT 235 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 235 (282)
++.+|+..++..|..++.+.|.+.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 567899999999999999999999999874
No 46
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=65.52 E-value=3.1 Score=30.35 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHh
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDN 237 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 237 (282)
++.+|+..++..|..++.+.|.+.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 56789999999999999999999999998754
No 47
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=64.82 E-value=7.3 Score=28.11 Aligned_cols=29 Identities=10% Similarity=-0.031 Sum_probs=27.0
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHH
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLI 234 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i 234 (282)
++.+++..++..|..++.+.|.+.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 56789999999999999999999999886
No 48
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=62.28 E-value=6.3 Score=33.81 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhcCC
Q 023429 174 LDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLN 207 (282)
Q Consensus 174 ~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l~ 207 (282)
++.+++..++.+|+.|+++.|+..|.++|..++.
T Consensus 272 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 272 LSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4667999999999999999999999999997653
No 49
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=60.04 E-value=22 Score=27.29 Aligned_cols=63 Identities=11% Similarity=0.189 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHhhhcCc---------------HhHHHHHHHHHHhcCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhHH
Q 023429 175 DEQLACDLLELAEKYQV---------------KHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMD 239 (282)
Q Consensus 175 ~~~~~~~ll~~A~~~~l---------------~~L~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 239 (282)
+...+..|+..+.+..- ..+...-.+|+ .++.+++..++..|...+...|.+.|.++++..+.
T Consensus 50 ~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 50 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp CHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 44555666666655441 12223334445 38899999999999999999999999999986544
No 50
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=59.74 E-value=1.9 Score=32.45 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhH
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDNM 238 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~ 238 (282)
++.+|+..++..|..++.+.|.+.|.+|+..++
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 677899999999999999999999999987654
No 51
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=54.87 E-value=4.4 Score=27.06 Aligned_cols=27 Identities=26% Similarity=0.602 Sum_probs=20.6
Q ss_pred ccccceecccccc--cccCCCCcchhhhh
Q 023429 28 ESETMRCISCREE--YGTRDAGTCKECYE 54 (282)
Q Consensus 28 ~~~~~~c~~~~~~--~~~~~~~~c~~c~~ 54 (282)
..-.-.|..||.+ ....+...|++|..
T Consensus 25 ~~v~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 25 ATLKYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCCCEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred ceEEEECCCCCCcceeCCCCCccCCCCCc
Confidence 3344789999998 55577888999875
No 52
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=54.42 E-value=57 Score=24.39 Aligned_cols=80 Identities=10% Similarity=0.160 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhCCCCC---CCHHHHHHHHHHhhhcCc---------------HhHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 023429 158 DALRAFVNYLYTAEAC---LDEQLACDLLELAEKYQV---------------KHLKAYCEKFLVSKLNWDNSVVNYAFAH 219 (282)
Q Consensus 158 ~~~~~lL~ylYtg~~~---~~~~~~~~ll~~A~~~~l---------------~~L~~~c~~~l~~~l~~~n~~~~l~~A~ 219 (282)
..++.++.-.-.+.++ ++...+..++..+.+..- ..+...-.+|+ .++.+++++++..|.
T Consensus 25 ~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd~~~l~eLi~AAn 102 (141)
T 1fs1_B 25 VTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAAN 102 (141)
T ss_dssp HHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCCHHHHHHHHHHHH
Confidence 4556665432122333 355666667766665541 12233333444 388999999999999
Q ss_pred HcChHHHHHHHHHHHHHhHH
Q 023429 220 QHNAKQLLEAALSLITDNMD 239 (282)
Q Consensus 220 ~~~~~~L~~~~~~~i~~~~~ 239 (282)
..+...|.+.|.++++..+.
T Consensus 103 yL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 103 YLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp HHTCHHHHHHHHHHHHHHHT
T ss_pred HHhhhHHHHHHHHHHHHHHc
Confidence 99999999999999987654
No 53
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=51.47 E-value=6.5 Score=29.72 Aligned_cols=29 Identities=17% Similarity=-0.027 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHH
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLI 234 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i 234 (282)
++.+|+..++..|..++.+.|.+.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 56789999999999999999999998875
No 54
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=50.90 E-value=6.9 Score=29.13 Aligned_cols=34 Identities=12% Similarity=-0.105 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhHH
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMD 239 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 239 (282)
++.+++..++..|..++.+.|...|.+++.+++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~ 124 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNLS 124 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC------
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence 4568899999999999999999999999986643
No 55
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=49.01 E-value=12 Score=27.30 Aligned_cols=31 Identities=19% Similarity=-0.022 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHH
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITD 236 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 236 (282)
++.+|+..++..|..++.+.|.+.|.+++..
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 5788999999999999999999999998754
No 56
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=41.40 E-value=20 Score=30.02 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHhhhcCcHhHHHHHHHHHHhcC------------CHHHHHHHHHHHHHc---ChHHHHHHHHHHHHHhH
Q 023429 174 LDEQLACDLLELAEKYQVKHLKAYCEKFLVSKL------------NWDNSVVNYAFAHQH---NAKQLLEAALSLITDNM 238 (282)
Q Consensus 174 ~~~~~~~~ll~~A~~~~l~~L~~~c~~~l~~~l------------~~~n~~~~l~~A~~~---~~~~L~~~~~~~i~~~~ 238 (282)
++..|+..++.+|+.|+++.|...|..++..+. +.+....++.- ... +-..+..+++.|+..+.
T Consensus 139 l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~-d~L~v~sE~~vf~av~~W~~~~~ 217 (279)
T 3i3n_A 139 LHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSD-LEITVDSEEVLFETVLKWVQRNA 217 (279)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTC-SSCCCSCHHHHHHHHHHHHHTTH
T ss_pred CCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcC-cCCCCCCHHHHHHHHHHHHHcCH
Confidence 566889999999999999999999999997543 22222232221 111 24568888888887554
No 57
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=41.13 E-value=23 Score=17.86 Aligned_cols=21 Identities=24% Similarity=0.406 Sum_probs=16.4
Q ss_pred HHHHHHHHcChHHHHHHHHHH
Q 023429 213 VNYAFAHQHNAKQLLEAALSL 233 (282)
Q Consensus 213 ~~l~~A~~~~~~~L~~~~~~~ 233 (282)
.++-+|.+++.++|...|++-
T Consensus 3 kvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhc
Confidence 456788888889988888763
No 58
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=37.31 E-value=4.5 Score=29.87 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=23.1
Q ss_pred cCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHh
Q 023429 205 KLNWDNSVVNYAFAHQHNAKQLLEAALSLITDN 237 (282)
Q Consensus 205 ~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 237 (282)
.++.+|+..++..|..++.+.|.+.|.+|+.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 367889999999999999999999999998754
No 59
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=37.29 E-value=25 Score=28.95 Aligned_cols=32 Identities=16% Similarity=-0.043 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHh
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDN 237 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 237 (282)
++.+++..++..|..++.+.|.+.|.+|+..+
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~ 130 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGC 130 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhh
Confidence 67889999999999999999999999999865
No 60
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=34.70 E-value=12 Score=27.37 Aligned_cols=30 Identities=17% Similarity=0.556 Sum_probs=22.2
Q ss_pred ccccccceecccccccccCCCC--cchhhhhh
Q 023429 26 EAESETMRCISCREEYGTRDAG--TCKECYEE 55 (282)
Q Consensus 26 ~~~~~~~~c~~~~~~~~~~~~~--~c~~c~~~ 55 (282)
......-+|..||..+...... .|+.|...
T Consensus 68 ~~~p~~~~C~~CG~~~e~~~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 68 VDEKVELECKDCSHVFKPNALDYGVCEKCHSK 99 (119)
T ss_dssp EEECCEEECSSSSCEECSCCSTTCCCSSSSSC
T ss_pred EeccceEEcCCCCCEEeCCCCCCCcCccccCC
Confidence 4445569999999998865553 69998654
No 61
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=33.81 E-value=11 Score=29.16 Aligned_cols=24 Identities=29% Similarity=0.840 Sum_probs=18.7
Q ss_pred ceecccccccccCC-CCcchhhhhh
Q 023429 32 MRCISCREEYGTRD-AGTCKECYEE 55 (282)
Q Consensus 32 ~~c~~~~~~~~~~~-~~~c~~c~~~ 55 (282)
-+|..||+.|.... ...|+.|...
T Consensus 133 y~C~~Cg~~~~~~~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 133 YVCIGCGRKFSTLPPGGVCPDCGSK 157 (165)
T ss_dssp EEESSSCCEESSCCGGGBCTTTCCB
T ss_pred EECCCCCCcccCCCCCCcCCCCCCc
Confidence 68999999998443 4589999754
No 62
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=28.94 E-value=23 Score=23.29 Aligned_cols=34 Identities=21% Similarity=0.519 Sum_probs=20.0
Q ss_pred CCCCCCccccccccceeccccccccc-CCCCcchhh
Q 023429 18 GSGSGLESEAESETMRCISCREEYGT-RDAGTCKEC 52 (282)
Q Consensus 18 ~~~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~c~~c 52 (282)
.+++..+..++....+|. |+..+.. ....-|..|
T Consensus 3 ~~~~~~e~~~~~~~~~C~-C~~~~~~g~~mI~Cd~C 37 (72)
T 1wee_A 3 SGSSGMERGVDNWKVDCK-CGTKDDDGERMLACDGC 37 (72)
T ss_dssp CCSCCCSCSSCSSEECCT-TCCCSCCSSCEEECSSS
T ss_pred CccccccCCCCCcceEee-CCCccCCCCcEEECCCC
Confidence 333445556677779995 8886532 234455555
No 63
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=24.50 E-value=33 Score=21.15 Aligned_cols=28 Identities=18% Similarity=0.478 Sum_probs=19.8
Q ss_pred ceecccccccc-------cCCCCcchhhhhhhhhh
Q 023429 32 MRCISCREEYG-------TRDAGTCKECYEEASET 59 (282)
Q Consensus 32 ~~c~~~~~~~~-------~~~~~~c~~c~~~~~~~ 59 (282)
.+|++||+... .+..--|..|-+.+.+.
T Consensus 12 ~~CSFCGk~~~ev~~LIaGpgv~IC~eCi~~~~~i 46 (51)
T 2ds5_A 12 LYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDI 46 (51)
T ss_dssp CBCTTTCCBTTTSSCEEECSSCEEEHHHHHHHHHH
T ss_pred cEecCCCCCHHHhcccCCCCCCEehHHHHHHHHHH
Confidence 68999998653 23345888888776653
No 64
>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C
Probab=22.58 E-value=42 Score=20.42 Aligned_cols=26 Identities=23% Similarity=0.503 Sum_probs=21.9
Q ss_pred ceec--ccccccccCCCCcchhhhhhhh
Q 023429 32 MRCI--SCREEYGTRDAGTCKECYEEAS 57 (282)
Q Consensus 32 ~~c~--~~~~~~~~~~~~~c~~c~~~~~ 57 (282)
..|. .||-.-.+...+.|..||.+..
T Consensus 19 ~lC~~ngCGFfG~p~t~n~CSkCyre~~ 46 (49)
T 3oj3_I 19 SKCRKAGCVYFGTPENKGFCTLCFIEYR 46 (49)
T ss_dssp CBCSSTTCSSBCBGGGTTBCHHHHHHHH
T ss_pred cccccCCCCCccCcccCCcchHHHHHHH
Confidence 5775 7888888999999999998754
No 65
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=22.20 E-value=48 Score=25.43 Aligned_cols=33 Identities=18% Similarity=0.148 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHhH
Q 023429 206 LNWDNSVVNYAFAHQHNAKQLLEAALSLITDNM 238 (282)
Q Consensus 206 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~ 238 (282)
++.++++.++..|...+...|.+.|.++++..+
T Consensus 93 vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~i 125 (160)
T 2p1m_A 93 IDQATLFELILAANYLNIKNLLDLTCQTVADMI 125 (160)
T ss_dssp --------CHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 788899999999999999999999999998654
No 66
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=22.12 E-value=20 Score=27.17 Aligned_cols=19 Identities=21% Similarity=0.665 Sum_probs=14.7
Q ss_pred cccccceecccccccccCC
Q 023429 27 AESETMRCISCREEYGTRD 45 (282)
Q Consensus 27 ~~~~~~~c~~~~~~~~~~~ 45 (282)
.....-+|..||..+....
T Consensus 66 ~~p~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLKE 84 (139)
T ss_dssp EECCEEEETTTCCEEEGGG
T ss_pred ecCCcEECCCCCCEEeccc
Confidence 4455689999999988655
No 67
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=20.70 E-value=98 Score=21.48 Aligned_cols=27 Identities=30% Similarity=0.738 Sum_probs=17.7
Q ss_pred cccceecccccccccCCCC------------cchhhhhh
Q 023429 29 SETMRCISCREEYGTRDAG------------TCKECYEE 55 (282)
Q Consensus 29 ~~~~~c~~~~~~~~~~~~~------------~c~~c~~~ 55 (282)
...--|+-||+......+| .|+.||+.
T Consensus 14 ~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY 52 (93)
T 1weo_A 14 LDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY 52 (93)
T ss_dssp CSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH
T ss_pred cCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHH
Confidence 3446799998875543333 57788876
Done!