Citrus Sinensis ID: 023430

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MVSTSQKNLHSLLTTKLKKLTITPPSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGGVFNF
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHcccccccccccEEEEEEEccccEEEEEEEccccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHccccEEEEcEEEccccccEEEEEEEccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEcccccccccccccEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccHHHcccccccccccccccccHcHHHHEEEcccccccEEEEEEEccccccccccEEEEEEEEHHHHHHcccHHHHHHHHHHHHHcccccEccEEEEEEcccEEEEEEEcccccEHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEEEcccccccccccHHHHEcccccccc
Coil and Loop (DISEMBL)
mvstsqknLHSLLTTKLkkltitppsasspdfdftevfgpltpcrhnnqspastsaslgdpqvihnrshsfvgpspryalssslplqIQELEHENDaeleaeserkigpgdfeIFRVVGQGAFGKVFQVKkkgvddgdsdgIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYrqgifredqaRFYTAEIVSAVSHLHkcgivhrdlkpenilmdsdghVMAAHSLNSHNQLCCFFFFLflgggvfnf
Flexible Loop (DISEMBL)
mvstsqknLHSLLTTKLKKLTITPPSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKvfqvkkkgvddgdsdgiyamkvmrkdtiikknHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGGVFNF
Low Complexity Region (SEG)
MVSTSQKNLHSllttklkkltITPPSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFgkvfqvkkkgvddgdsdgIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQlccfffflflgggVFNF
Disordered region (IsUnstruct)
************************************VF***********************************************************************GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGGVF**
Disordered Region (DISOPRED)
***********LLTTKLKKL********SPDFDFTEVFG***********************************************************************DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGGV***
Disordered Region (DISEMBL)
*********HSLLTTKLKKLTITPPSASSPDFDFTEVFGPLTPCRHNN**********GDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGGVFNF
Disordered Region (DISPRO)
*********************************************************************************************************KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGGVF**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVSTSQKNLHSLLTTKLKKLTITPPSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGGVFNF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
Q39030	471	Serine/threonine-protein	yes	no	0.797	0.477	0.541	2e-69
P42818	465	Serine/threonine-protein	no	no	0.804	0.488	0.507	3e-65
P28178	479	Protein kinase 2 OS=Dicty	yes	no	0.492	0.290	0.597	4e-47
P54644	444	RAC family serine/threoni	no	no	0.531	0.337	0.503	1e-42
Q8MYF1	456	Probable serine/threonine	no	no	0.510	0.315	0.543	5e-42
P11792	824	Serine/threonine-protein	yes	no	0.517	0.177	0.512	2e-41
Q9UBS0	482	Ribosomal protein S6 kina	yes	no	0.581	0.340	0.508	3e-41
P51812	740	Ribosomal protein S6 kina	no	no	0.531	0.202	0.522	2e-40
P18654	740	Ribosomal protein S6 kina	yes	no	0.531	0.202	0.522	2e-40
Q9Z1M4	485	Ribosomal protein S6 kina	no	no	0.581	0.338	0.502	4e-40

>sp|Q39030|KPK2_ARATH Serine/threonine-protein kinase AtPK2/AtPK19 OS=Arabidopsis thaliana GN=ATPK2 PE=1 SV=2

 Score =  262 bits (670), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/266 (54%), Positives = 179/266 (67%), Gaps = 41/266 (15%)

Query: 20  LTITPPSASSPD---FDFTEVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFVGPSP 76
           L+I+PP +   D     F++VFGP+        S  +   +  +P V+++RSHS VGPS 
Sbjct: 24  LSISPPKSVLGDNLELQFSDVFGPMPEA----NSEEACDVAYDEPAVVYSRSHSLVGPS- 78

Query: 77  RYALSSSLP---LQIQELE--------------HEND---AELEAESERK-------IGP 109
              +S SL    L ++E E               END      + +SE+        +G 
Sbjct: 79  -LVVSHSLKMNKLTLRETEDSVDLVECVEGESIKENDEFSGNDDTDSEKSPEEVSGVVGI 137

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            DFE+ +VVGQGAFGKV+QV+KK     D+  IYAMKVMRKD I++KNH +YMKAERDIL
Sbjct: 138 EDFEVLKVVGQGAFGKVYQVRKK-----DTSEIYAMKVMRKDKIVEKNHAEYMKAERDIL 192

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           TK+ HPFIVQL+YSFQT+ +LYL+LDFINGGHLFF LY QG+FRED AR YTAEIVSAVS
Sbjct: 193 TKIDHPFIVQLKYSFQTKYRLYLVLDFINGGHLFFQLYHQGLFREDLARVYTAEIVSAVS 252

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVM 255
           HLH+ GI+HRDLKPENILMD DGHVM
Sbjct: 253 HLHEKGIMHRDLKPENILMDVDGHVM 278

Downstream effector of TOR signaling pathway. May be involved in adaptation of plant to cold or high-salt conditions.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|P42818|KPK1_ARATH Serine/threonine-protein kinase AtPK1/AtPK6 OS=Arabidopsis thaliana GN=ATPK1 PE=1 SV=1

 Score =  248 bits (634), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/272 (50%), Positives = 180/272 (66%), Gaps = 45/272 (16%)

Query: 16  KLKKLTITPPSASSPD---FDFTEVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFV 72
           K + L+I+P ++   D    +F++VFGPL P   N+        +  +P V+++RSHS V
Sbjct: 14  KQQYLSISPSNSVLKDDVELEFSDVFGPL-PEEAND-------IAYDEPAVVYSRSHSLV 65

Query: 73  GPSPRYALSSSLP----------------LQIQELEHENDAELEAESERK---------- 106
           GP    + S  L                 L+ + L+  +D     +S+ +          
Sbjct: 66  GPCSLDSHSLKLTKLTLLETEDSIDLVECLEGESLKENDDFSGNDDSDNEKALEGDLVKV 125

Query: 107 ---IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK 163
              +G  DFE+ +VVG+GAFGKV+QV+KK     ++  IYAMKVMRKD I++KNH +YMK
Sbjct: 126 SGVVGIDDFEVMKVVGKGAFGKVYQVRKK-----ETSEIYAMKVMRKDHIMEKNHAEYMK 180

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
           AERDILTK+ HPFIVQL+YSFQT+ +LYL+LDFINGGHLFF LY QG+FRED AR YTAE
Sbjct: 181 AERDILTKIDHPFIVQLKYSFQTKYRLYLVLDFINGGHLFFQLYHQGLFREDLARVYTAE 240

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           IVSAVSHLH+ GI+HRDLKPENILMD+DGHVM
Sbjct: 241 IVSAVSHLHEKGIMHRDLKPENILMDTDGHVM 272

Downstream effector of TOR signaling pathway involved in osmotic stress response. Could be involved in the control of plant growth and development. Phosphorylates the ribosomal proteins P14, P16 and S6.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P28178|PK2_DICDI Protein kinase 2 OS=Dictyostelium discoideum GN=pkgB PE=1 SV=2

 Score =  188 bits (478), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 86/144 (59%), Positives = 112/144 (77%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE+  V+G+G+FGKV QVKKKG      D I+AMKV+RKD II +  V++ K+E+ IL 
Sbjct: 152 DFELLNVIGKGSFGKVMQVKKKG-----EDKIFAMKVLRKDAIIARKQVNHTKSEKTILQ 206

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            ++HPFIV L Y+FQT+ KLY++LDF+NGG LFFHL R+G F E + + Y AEIVSA+ H
Sbjct: 207 CISHPFIVNLHYAFQTKDKLYMVLDFVNGGELFFHLKREGRFSEPRVKIYAAEIVSALDH 266

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LHK  IV+RDLKPENIL+DS+GH+
Sbjct: 267 LHKQDIVYRDLKPENILLDSEGHI 290

Required for morphogenesis during multicellular development. Phosphorylates talB, gefN, gefS, PI4P 5-kinase and gacQ.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P54644|KRAC_DICDI RAC family serine/threonine-protein kinase homolog OS=Dictyostelium discoideum GN=pkbA PE=1 SV=1

 Score =  173 bits (438), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 78/155 (50%), Positives = 112/155 (72%), Gaps = 5/155 (3%)

Query: 100 EAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV 159
           + +   K+G  DFE+  +VG+G+FGKV QV+KK     D+  +YAMKV+ K  I++ N V
Sbjct: 108 QPKKSEKVGVADFELLNLVGKGSFGKVIQVRKK-----DTGEVYAMKVLSKKHIVEHNEV 162

Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
           ++  +ER+IL K+ HPF+V L YSFQT  KLY ILD++NGG LF+HL +   F ED+ R+
Sbjct: 163 EHTLSERNILQKINHPFLVNLNYSFQTEDKLYFILDYVNGGELFYHLQKDKKFTEDRVRY 222

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           Y AEIV A+ HLH  G+++RDLKPEN+L+ ++GH+
Sbjct: 223 YGAEIVLALEHLHLSGVIYRDLKPENLLLTNEGHI 257

Predominantly involved during the aggregation to control cell polarity and chemotaxis. Phosphorylates talB, gefN, gefS, PI4P 5-kinase and gacQ.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8MYF1|Y2070_DICDI Probable serine/threonine-protein kinase DDB_G0277449 OS=Dictyostelium discoideum GN=DDB_G0277449 PE=3 SV=1

 Score =  171 bits (434), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 105/149 (70%), Gaps = 5/149 (3%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I   +F I  +VG+G FGKVFQV        D+  +YA+KV++K+ II K  V    AE+
Sbjct: 123 INLSNFIIKHLVGKGGFGKVFQVV-----HVDTQKVYALKVIKKNHIIAKKSVVNTLAEK 177

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 226
           DIL K++HPFIV L Y+FQ   KLYL++DF+NGG LF+HL ++ IF EDQ RFY AE++ 
Sbjct: 178 DILKKISHPFIVNLHYAFQNEKKLYLVMDFVNGGQLFYHLQKEAIFSEDQVRFYMAELIL 237

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           A+ HLH   IVHRDLKPENIL+DS GH +
Sbjct: 238 ALEHLHDSNIVHRDLKPENILLDSQGHCI 266

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P11792|SCH9_YEAST Serine/threonine-protein kinase SCH9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCH9 PE=1 SV=3

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/154 (51%), Positives = 113/154 (73%), Gaps = 8/154 (5%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK 163
           +R  GP DFE+ R++G+G FG+V+QVKKK     D+  IYAMKV+ K  I+KKN + +  
Sbjct: 404 KRHYGPQDFEVLRLLGKGTFGQVYQVKKK-----DTQRIYAMKVLSKKVIVKKNEIAHTI 458

Query: 164 AERDILTKV---THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
            ER+IL      + PFIV L++SFQT + LYL+ D+++GG LF+HL ++G F ED+A+FY
Sbjct: 459 GERNILVTTASKSSPFIVGLKFSFQTPTDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFY 518

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            AE+V A+ HLH   IV+RDLKPENIL+D++G++
Sbjct: 519 IAELVLALEHLHDNDIVYRDLKPENILLDANGNI 552

Protein kinase that is part of growth control pathway which is at least partially redundant with the cAMP pathway. Regulates both BCY1 phosphorylation and MPK1 activity.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UBS0|KS6B2_HUMAN Ribosomal protein S6 kinase beta-2 OS=Homo sapiens GN=RPS6KB2 PE=1 SV=2

 Score =  168 bits (426), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/173 (50%), Positives = 118/173 (68%), Gaps = 9/173 (5%)

Query: 88  IQELEHENDAELEAES----ERKIGPGDFEIFRVVGQGAFGKVFQVKK-KGVDDGDSDGI 142
           ++ + H  + EL   S      +IGP  FE+ RV+G+G +GKVFQV+K +G + G    I
Sbjct: 39  LEPVGHYEEVELTETSVNVGPERIGPHCFELLRVLGKGGYGKVFQVRKVQGTNLGK---I 95

Query: 143 YAMKVMRKDTIIKK-NHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           YAMKV+RK  I++      + +AER+IL  V HPFIV+L Y+FQT  KLYLIL+ ++GG 
Sbjct: 96  YAMKVLRKAKIVRNAKDTAHTRAERNILESVKHPFIVELAYAFQTGGKLYLILECLSGGE 155

Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           LF HL R+GIF ED A FY AEI  A+ HLH  GI++RDLKPENI++ S GH+
Sbjct: 156 LFTHLEREGIFLEDTACFYLAEITLALGHLHSQGIIYRDLKPENIMLSSQGHI 208

Phosphorylates specifically ribosomal protein S6.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P51812|KS6A3_HUMAN Ribosomal protein S6 kinase alpha-3 OS=Homo sapiens GN=RPS6KA3 PE=1 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/153 (52%), Positives = 108/153 (70%), Gaps = 3/153 (1%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
           E   K  P  FE+ +V+GQG+FGKVF VKK  +   D+  +YAMKV++K T+  ++ V  
Sbjct: 58  EGHEKADPSQFELLKVLGQGSFGKVFLVKK--ISGSDARQLYAMKVLKKATLKVRDRV-R 114

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
            K ERDIL +V HPFIV+L Y+FQT  KLYLILDF+ GG LF  L ++ +F E+  +FY 
Sbjct: 115 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 174

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           AE+  A+ HLH  GI++RDLKPENIL+D +GH+
Sbjct: 175 AELALALDHLHSLGIIYRDLKPENILLDEEGHI 207

Serine/threonine-protein kinase that acts downstream of ERK (MAPK1/ERK2 and MAPK3/ERK1) signaling and mediates mitogenic and stress-induced activation of the transcription factors CREB1, ETV1/ER81 and NR4A1/NUR77, regulates translation through RPS6 and EIF4B phosphorylation, and mediates cellular proliferation, survival, and differentiation by modulating mTOR signaling and repressing pro-apoptotic function of BAD and DAPK1. In fibroblast, is required for EGF-stimulated phosphorylation of CREB1 and histone H3 at 'Ser-10', which results in the subsequent transcriptional activation of several immediate-early genes. In response to mitogenic stimulation (EGF and PMA), phosphorylates and activates NR4A1/NUR77 and ETV1/ER81 transcription factors and the cofactor CREBBP. Upon insulin-derived signal, acts indirectly on the transcription regulation of several genes by phosphorylating GSK3B at 'Ser-9' and inhibiting its activity. Phosphorylates RPS6 in response to serum or EGF via an mTOR-independent mechanism and promotes translation initiation by facilitating assembly of the preinitiation complex. In response to insulin, phosphorylates EIF4B, enhancing EIF4B affinity for the EIF3 complex and stimulating cap-dependent translation. Is involved in the mTOR nutrient-sensing pathway by directly phosphorylating TSC2 at 'Ser-1798', which potently inhibits TSC2 ability to suppress mTOR signaling, and mediates phosphorylation of RPTOR, which regulates mTORC1 activity and may promote rapamycin-sensitive signaling independently of the PI3K/AKT pathway. Mediates cell survival by phosphorylating the pro-apoptotic proteins BAD and DAPK1 and suppressing their pro-apoptotic function. Promotes the survival of hepatic stellate cells by phosphorylating CEBPB in response to the hepatotoxin carbon tetrachloride (CCl4). Is involved in cell cycle regulation by phosphorylating the CDK inhibitor CDKN1B, which promotes CDKN1B association with 14-3-3 proteins and prevents its translocation to the nucleus and inhibition of G1 progression. In LPS-stimulated dendritic cells, is involved in TLR4-induced macropinocytosis, and in myeloma cells, acts as effector of FGFR3-mediated transformation signaling, after direct phosphorylation at Thr-529 by FGFR3. Phosphorylates DAPK1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P18654|KS6A3_MOUSE Ribosomal protein S6 kinase alpha-3 OS=Mus musculus GN=Rps6ka3 PE=1 SV=2

 Score =  166 bits (419), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/153 (52%), Positives = 108/153 (70%), Gaps = 3/153 (1%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
           E   K  P  FE+ +V+GQG+FGKVF VKK  +   D+  +YAMKV++K T+  ++ V  
Sbjct: 58  EGHEKADPSQFELLKVLGQGSFGKVFLVKK--ISGSDARQLYAMKVLKKATLKVRDRV-R 114

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
            K ERDIL +V HPFIV+L Y+FQT  KLYLILDF+ GG LF  L ++ +F E+  +FY 
Sbjct: 115 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 174

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           AE+  A+ HLH  GI++RDLKPENIL+D +GH+
Sbjct: 175 AELALALDHLHSLGIIYRDLKPENILLDEEGHI 207

Serine/threonine-protein kinase that acts downstream of ERK (MAPK1/ERK2 and MAPK3/ERK1) signaling and mediates mitogenic and stress-induced activation of the transcription factors CREB1, ETV1/ER81 and NR4A1/NUR77, regulates translation through RPS6 and EIF4B phosphorylation, and mediates cellular proliferation, survival, and differentiation by modulating mTOR signaling and repressing pro-apoptotic function of BAD and DAPK1. In fibroblast, is required for EGF-stimulated phosphorylation of CREB1 and histone H3 at 'Ser-10', which results in the subsequent transcriptional activation of several immediate-early genes. In response to mitogenic stimulation (EGF and PMA), phosphorylates and activates NR4A1/NUR77 and ETV1/ER81 transcription factors and the cofactor CREBBP. Upon insulin-derived signal, acts indirectly on the transcription regulation of several genes by phosphorylating GSK3B at 'Ser-9' and inhibiting its activity. Phosphorylates RPS6 in response to serum or EGF via an mTOR-independent mechanism and promotes translation initiation by facilitating assembly of the preinitiation complex. In response to insulin, phosphorylates EIF4B, enhancing EIF4B affinity for the EIF3 complex and stimulating cap-dependent translation. Is involved in the mTOR nutrient-sensing pathway by directly phosphorylating TSC2 at 'Ser-1798', which potently inhibits TSC2 ability to suppress mTOR signaling, and mediates phosphorylation of RPTOR, which regulates mTORC1 activity and may promote rapamycin-sensitive signaling independently of the PI3K/AKT pathway. Mediates cell survival by phosphorylating the pro-apoptotic proteins BAD and DAPK1 and suppressing their pro-apoptotic function. Promotes the survival of hepatic stellate cells by phosphorylating CEBPB in response to the hepatotoxin carbon tetrachloride (CCl4). Is involved in cell cycle regulation by phosphorylating the CDK inhibitor CDKN1B, which promotes CDKN1B association with 14-3-3 proteins and prevents its translocation to the nucleus and inhibition of G1 progression. In LPS-stimulated dendritic cells, is involved in TLR4-induced macropinocytosis, and in myeloma cells, acts as effector of FGFR3-mediated transformation signaling, after direct phosphorylation at Thr-529 by FGFR3. Phosphorylates DAPK1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Z1M4|KS6B2_MOUSE Ribosomal protein S6 kinase beta-2 OS=Mus musculus GN=Rps6kb2 PE=1 SV=1

 Score =  165 bits (417), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/173 (50%), Positives = 116/173 (67%), Gaps = 9/173 (5%)

Query: 88  IQELEHENDAELEAES----ERKIGPGDFEIFRVVGQGAFGKVFQVKK-KGVDDGDSDGI 142
           ++ + H  + EL   S      +IGP  FE+  V+G+G +GKVFQV+K +G + G    I
Sbjct: 39  LETVGHYEEVELTESSVNLGPERIGPHCFELLSVLGKGGYGKVFQVRKVQGTNLGK---I 95

Query: 143 YAMKVMRKDTII-KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           YAMKV+RK  I+       + +AER+IL  V HPFIV+L Y+FQT  KLYLIL+ ++GG 
Sbjct: 96  YAMKVLRKAKIVCSAKDTAHTRAERNILESVKHPFIVELAYAFQTGGKLYLILECLSGGE 155

Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           LF HL R+GIF ED A FY AEI  A+ HLH  GI++RDLKPENI++ S GH+
Sbjct: 156 LFTHLEREGIFLEDTACFYLAEITLALGHLHSHGIIYRDLKPENIMLSSQGHI 208

Phosphorylates specifically ribosomal protein S6.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
225457176	452	PREDICTED: serine/threonine-protein kina	0.875	0.546	0.673	5e-90
224119194	470	predicted protein [Populus trichocarpa]	0.886	0.531	0.665	5e-89
147817142	463	hypothetical protein VITISV_040765 [Viti	0.875	0.533	0.669	5e-89
449440730	483	PREDICTED: serine/threonine-protein kina	0.868	0.507	0.614	3e-85
449527582	486	PREDICTED: serine/threonine-protein kina	0.868	0.504	0.608	8e-85
62183960	466	putative ribosomal-protein S6 kinase-lik	0.872	0.527	0.6	3e-77
358248554	415	uncharacterized protein LOC100798259 [Gl	0.680	0.462	0.775	4e-75
168036479	470	predicted protein [Physcomitrella patens	0.790	0.474	0.569	1e-71
167999486	452	predicted protein [Physcomitrella patens	0.780	0.486	0.558	3e-71
302807666	456	hypothetical protein SELMODRAFT_181752 [	0.812	0.502	0.547	3e-70

>gi|225457176|ref|XP_002280523.1| PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Vitis vinifera]

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 177/263 (67%), Positives = 205/263 (77%), Gaps = 16/263 (6%)

Query: 6   QKNLHSLLTTKLKKLTITPPSASSPD-FDFTEVFGPLTPCRHN------NQSPASTSASL 58
           +K LHS+L +KLK   +T PS SSPD  DF++VFGPLTP  H       + S +S   +L
Sbjct: 8   KKTLHSILASKLK---LTIPSPSSPDSLDFSDVFGPLTPHHHKASPSSSSPSSSSPCVAL 64

Query: 59  GDPQVIHNRSHSFVGPSPRYALSSSL-PLQIQELEHENDAELEAE---SERKIGPGDFEI 114
           GDPQVIHNRSHS +GPSPR+A+++ L P +   +     ++ E      E ++GPGDFEI
Sbjct: 65  GDPQVIHNRSHSLLGPSPRFAVTAPLLPFKEDMVFQSEGSDKEGGDEVGEGRVGPGDFEI 124

Query: 115 FRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV 172
            RVVG+GAFGKVFQV+KKG  +  GDSDGI+AMKVMRKDTII KNH+DYMKAERDIL KV
Sbjct: 125 MRVVGKGAFGKVFQVRKKGGPEISGDSDGIFAMKVMRKDTIISKNHMDYMKAERDILIKV 184

Query: 173 THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH 232
            HPFIV LR SFQT SKLYLI+DF+NGGHLFFHLYRQGIF EDQAR Y AEIVSAVSHLH
Sbjct: 185 EHPFIVSLRCSFQTNSKLYLIMDFVNGGHLFFHLYRQGIFSEDQARVYIAEIVSAVSHLH 244

Query: 233 KCGIVHRDLKPENILMDSDGHVM 255
           K GIVHRDLKPENILMD+DGHVM
Sbjct: 245 KSGIVHRDLKPENILMDADGHVM 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119194|ref|XP_002318010.1| predicted protein [Populus trichocarpa] gi|222858683|gb|EEE96230.1| predicted protein [Populus trichocarpa]

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 189/284 (66%), Positives = 213/284 (75%), Gaps = 34/284 (11%)

Query: 1   MVSTSQK-NLHSLLTTKLKKLTITPPSASSPDFDFTEVFGPL-TPCRHNNQSPASTSASL 58
           +VSTSQK  L SLL+  LKKLTITPP+    D +F++VFGP  TP   N+    STS+S+
Sbjct: 6   LVSTSQKKTLLSLLSINLKKLTITPPN----DLEFSDVFGPSSTPHDPNHSHSPSTSSSV 61

Query: 59  GDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAES--------------- 103
            DP VIHNRSHSFVGPSPRY L SS PL    ++ +++A +E ES               
Sbjct: 62  LDPPVIHNRSHSFVGPSPRYPLPSS-PLPFHHIQEDDEAVIENESCDNEKGKSEDDEGQV 120

Query: 104 -----ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-------IYAMKVMRKD 151
                  KIGP DFEI RVVG+GAFGKVFQV+KK  D  +  G       IYAMKVMRKD
Sbjct: 121 GSCGNNNKIGPADFEILRVVGKGAFGKVFQVRKKTGDGKEKGGGGGSGDGIYAMKVMRKD 180

Query: 152 TIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI 211
           TIIKK HVDYMKAERDILTKV HPFIVQLRYSFQT+SKLYLILDF+NGGHLFFHLYRQGI
Sbjct: 181 TIIKKKHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFMNGGHLFFHLYRQGI 240

Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           F EDQARFYTAEIVSAV+HLHKCGIVHRDLKPENIL+D+DGHV+
Sbjct: 241 FSEDQARFYTAEIVSAVAHLHKCGIVHRDLKPENILLDADGHVL 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147817142|emb|CAN77683.1| hypothetical protein VITISV_040765 [Vitis vinifera]

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 176/263 (66%), Positives = 204/263 (77%), Gaps = 16/263 (6%)

Query: 6   QKNLHSLLTTKLKKLTITPPSASSPD-FDFTEVFGPLTPCRHN------NQSPASTSASL 58
           +K LHS+L +KLK   +T PS SSPD  DF++VFGPLTP  H       + S +S   +L
Sbjct: 8   KKTLHSILASKLK---LTIPSPSSPDSLDFSDVFGPLTPHHHKASPSSSSPSSSSPCVAL 64

Query: 59  GDPQVIHNRSHSFVGPSPRYALSSSL-PLQIQELEHENDAELEAE---SERKIGPGDFEI 114
           GDPQVIHNRSHS +GPSPR+A+++ L P +   +     ++ E      E ++GPGDFEI
Sbjct: 65  GDPQVIHNRSHSLLGPSPRFAVTAPLLPFKEDMVFQSEGSDKEGGDEVGEGRVGPGDFEI 124

Query: 115 FRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV 172
            RVVG+GAFGKVFQV+KKG  +  GDSDGI+AMKVMRKDTII KNH+DYMKAERDIL KV
Sbjct: 125 MRVVGKGAFGKVFQVRKKGGPEISGDSDGIFAMKVMRKDTIISKNHMDYMKAERDILIKV 184

Query: 173 THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH 232
            HPFIV LR  FQT SKLYLI+DF+NGGHLFFHLYRQGIF EDQAR Y AEIVSAVSHLH
Sbjct: 185 EHPFIVSLRCFFQTNSKLYLIMDFVNGGHLFFHLYRQGIFSEDQARVYIAEIVSAVSHLH 244

Query: 233 KCGIVHRDLKPENILMDSDGHVM 255
           K GIVHRDLKPENILMD+DGHVM
Sbjct: 245 KSGIVHRDLKPENILMDADGHVM 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440730|ref|XP_004138137.1| PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Cucumis sativus]

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 188/306 (61%), Positives = 208/306 (67%), Gaps = 61/306 (19%)

Query: 1   MVSTS-QKNLHSLLTTKLKKLTITPPSASSP---------DFDFTEVFGPLTPCRHNNQS 50
           MVS S QKN+HSLL   L KLTI   S+SS          DFDF +VFGP  P       
Sbjct: 1   MVSASIQKNMHSLLVANLTKLTIPSSSSSSSPSASAAAVHDFDFNDVFGPTNP------- 53

Query: 51  PASTSASLGDPQ--------VIHNRSHSFVGPSPRYALSSSLPLQIQELEHE-------- 94
             S S+  GDPQ        VIHNRSHSFVGPSPR    +SLP   +E++ +        
Sbjct: 54  --SPSSFHGDPQHHEQQQPVVIHNRSHSFVGPSPRLTPPASLPF-FREVDSQSEGEEEEE 110

Query: 95  --NDAEL------EAESER--------------KIGPGDFEIFRVVGQGAFGKVFQVKKK 132
             ND E+      + E +R              KIG GDF+I RVVG+GAFGKVF V+KK
Sbjct: 111 EENDLEISTRDGAQEEEKRVGETENCSGENVQGKIGVGDFDILRVVGKGAFGKVFLVRKK 170

Query: 133 GVDDG---DSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK 189
           G   G   D+D IYAMKVMRKDTIIKKNHVDYMKAERDILTKV HPFIVQLRYSFQT+SK
Sbjct: 171 GNCKGNGSDNDEIYAMKVMRKDTIIKKNHVDYMKAERDILTKVAHPFIVQLRYSFQTKSK 230

Query: 190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           LYLILDFINGGHLF+HLYRQGIF EDQAR Y AEIVSAVSHLH CGIVHRDLKPENILMD
Sbjct: 231 LYLILDFINGGHLFYHLYRQGIFSEDQARVYAAEIVSAVSHLHNCGIVHRDLKPENILMD 290

Query: 250 SDGHVM 255
           +DGHV+
Sbjct: 291 ADGHVV 296

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527582|ref|XP_004170789.1| PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Cucumis sativus]

 Score =  319 bits (818), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 188/309 (60%), Positives = 208/309 (67%), Gaps = 64/309 (20%)

Query: 1   MVSTS-QKNLHSLLTTKLKKLTITPPSASSP------------DFDFTEVFGPLTPCRHN 47
           MVS S QKN+HSLL   L KLTI   S+SS             DFDF +VFGP  P    
Sbjct: 1   MVSASIQKNMHSLLVANLTKLTIPSSSSSSSPSASAAAAAAVHDFDFNDVFGPTNP---- 56

Query: 48  NQSPASTSASLGDPQ--------VIHNRSHSFVGPSPRYALSSSLPLQIQELEHE----- 94
                S S+  GDPQ        VIHNRSHSFVGPSPR    +SLP   +E++ +     
Sbjct: 57  -----SPSSFHGDPQHHEQQQPVVIHNRSHSFVGPSPRLTPPASLPF-FREVDSQSEGEE 110

Query: 95  -----NDAEL------EAESER--------------KIGPGDFEIFRVVGQGAFGKVFQV 129
                ND E+      + E +R              KIG GDF+I RVVG+GAFGKVF V
Sbjct: 111 EEEEENDLEISTRDGAQEEEKRVGETENCSGENVQGKIGVGDFDILRVVGKGAFGKVFLV 170

Query: 130 KKKGVDDG---DSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT 186
           +KKG   G   D+D IYAMKVMRKDTIIKKNHVDYMKAERDILTKV HPFIVQLRYSFQT
Sbjct: 171 RKKGNCKGNGSDNDEIYAMKVMRKDTIIKKNHVDYMKAERDILTKVAHPFIVQLRYSFQT 230

Query: 187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENI 246
           +SKLYLILDFINGGHLF+HLYRQGIF EDQAR Y AEIVSAVSHLH CGIVHRDLKPENI
Sbjct: 231 KSKLYLILDFINGGHLFYHLYRQGIFSEDQARVYAAEIVSAVSHLHNCGIVHRDLKPENI 290

Query: 247 LMDSDGHVM 255
           LMD+DGHV+
Sbjct: 291 LMDADGHVV 299

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62183960|gb|AAX73301.1| putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum]

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 171/285 (60%), Positives = 200/285 (70%), Gaps = 39/285 (13%)

Query: 2   VSTSQKNLHSLLTTKLKKLTITPPSASSPD------FDFTEVFGPLTPCRHNNQSPASTS 55
            +  +K +HS+L  KL  L I   S+SS        FDF++VFG  T       SP+S+S
Sbjct: 4   AAQQKKAIHSMLANKLTHLKIPDSSSSSSPPPTDPDFDFSDVFGAPT-------SPSSSS 56

Query: 56  ASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAEL---------------- 99
           + L DPQ+IH+RSHSFVGPSPR  LS  LP   QE++ E +++                 
Sbjct: 57  SFLTDPQIIHSRSHSFVGPSPRITLSKPLPFH-QEVDSEGESDSDKVNTHVGTHQTECSD 115

Query: 100 --------EAESERKIGPGDFEIFRVVGQGAFGKVFQVK-KKGVDDGDSDGIYAMKVMRK 150
                   E  +  K GPGDFEI R++G+G+FGKVFQVK K    +G+ DGI AMKVMRK
Sbjct: 116 GIEEISGDEGSAVTKFGPGDFEILRMIGKGSFGKVFQVKMKGYGGEGEGDGILAMKVMRK 175

Query: 151 DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG 210
           DT+IK NHVDYM+AERDILTKV HPFIVQLRYSFQT+SKLYLILDFINGGHLF+HLYRQG
Sbjct: 176 DTVIKNNHVDYMRAERDILTKVEHPFIVQLRYSFQTKSKLYLILDFINGGHLFYHLYRQG 235

Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           IF EDQAR Y AEIVSAVSHLH+ GIVHRDLKPENILMD DGHVM
Sbjct: 236 IFSEDQARIYAAEIVSAVSHLHQRGIVHRDLKPENILMDGDGHVM 280

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248554|ref|NP_001239901.1| uncharacterized protein LOC100798259 [Glycine max] gi|255634893|gb|ACU17805.1| unknown [Glycine max]

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 152/196 (77%), Positives = 163/196 (83%), Gaps = 4/196 (2%)

Query: 63  VIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELE---AESERKIGPGDFEIFRVVG 119
           VI +RSHSFVGPSPR+ + SS PL   E E E + E E        KIGP DF I RVVG
Sbjct: 32  VIFSRSHSFVGPSPRF-VPSSTPLFFLEEEEEEEEEEELPFGPDPPKIGPSDFHILRVVG 90

Query: 120 QGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQ 179
           QGAFGKVF V+KKG    D+DG++AMKVMRKDTIIKKNHVDYMKAERDILTKV HPFIVQ
Sbjct: 91  QGAFGKVFLVRKKGDCFDDADGVFAMKVMRKDTIIKKNHVDYMKAERDILTKVLHPFIVQ 150

Query: 180 LRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHR 239
           LRYSFQT+SKLYL+LDFINGGHLFF LYRQGIF EDQAR YTAEIVSAVSHLHK GIVHR
Sbjct: 151 LRYSFQTKSKLYLVLDFINGGHLFFQLYRQGIFSEDQARLYTAEIVSAVSHLHKNGIVHR 210

Query: 240 DLKPENILMDSDGHVM 255
           DLKPENILMD+DGHVM
Sbjct: 211 DLKPENILMDADGHVM 226

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168036479|ref|XP_001770734.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677952|gb|EDQ64416.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/260 (56%), Positives = 178/260 (68%), Gaps = 37/260 (14%)

Query: 25  PSASSPDFDFTEVFGPLTPCRHNNQSPASTSAS-----------LGDPQVIHNRSHSFVG 73
           P   + ++DF++VFG + P   +N  P    A            L DP V+++RSHS VG
Sbjct: 28  PDQLNEEYDFSDVFGHVQP---HNTPPLLVVAEDVDTIEWGPELLQDPVVVYSRSHSLVG 84

Query: 74  PSPRYAL-------------SSSLPLQIQELEHENDAELEAESER-----KIGPGDFEIF 115
           PSP+ +L             SSS   +    E E D  L  E E+     K+GP DFE+ 
Sbjct: 85  PSPKLSLTRSHNKSACDEQGSSSAIEEAISFERECDEHLPKELEKGNGVEKLGPQDFELL 144

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           RVVGQGAFGKVFQV+KKG  +     IYAMKVMRK+ II++NH DYMKAERDILTKV HP
Sbjct: 145 RVVGQGAFGKVFQVQKKGTSE-----IYAMKVMRKEKIIERNHGDYMKAERDILTKVVHP 199

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
           FIVQL+YSFQT+SKLYL+LDFINGGHLFF L+RQG F ED AR YTAEIV AV+HLH+ G
Sbjct: 200 FIVQLQYSFQTKSKLYLVLDFINGGHLFFQLFRQGTFNEDLARMYTAEIVLAVAHLHENG 259

Query: 236 IVHRDLKPENILMDSDGHVM 255
           I+HRDLKPENIL+D+DGHVM
Sbjct: 260 IIHRDLKPENILLDADGHVM 279

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|167999486|ref|XP_001752448.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696348|gb|EDQ82687.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  274 bits (701), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/265 (55%), Positives = 179/265 (67%), Gaps = 45/265 (16%)

Query: 25  PSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLG-----------DPQVIHNRSHSFVG 73
           P   + +FDF++VFGP+ P   +  SP    A  G           DP V+++RSHS VG
Sbjct: 8   PDQCNEEFDFSDVFGPVPP---HPTSPLPAVAEDGETIDWSLELRQDPVVVYSRSHSLVG 64

Query: 74  PSPRYALSSSLPLQIQELEHENDA-----------------ELEAE------SERKIGPG 110
           PSP+ +L+    LQ + +  E D+                 EL ++         K+GP 
Sbjct: 65  PSPKPSLTR---LQSKPVWDEQDSLSLVRVASDSPTVHEVGELTSKDFVNGIGTEKLGPQ 121

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE+ RVVGQGAFGKVFQV+KKG  +     IYAMKVMRK+ II++NH DYMKAERDILT
Sbjct: 122 DFELLRVVGQGAFGKVFQVQKKGTSE-----IYAMKVMRKEKIIERNHGDYMKAERDILT 176

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           KV HPFIVQL+YSFQT+SKLYL+LDFINGGHLFF LYRQG F ED AR YTAEIV AV+H
Sbjct: 177 KVVHPFIVQLQYSFQTQSKLYLVLDFINGGHLFFQLYRQGTFNEDLARMYTAEIVLAVAH 236

Query: 231 LHKCGIVHRDLKPENILMDSDGHVM 255
           LHK GI+HRDLKPENIL+D DG+VM
Sbjct: 237 LHKNGIIHRDLKPENILLDGDGYVM 261

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302807666|ref|XP_002985527.1| hypothetical protein SELMODRAFT_181752 [Selaginella moellendorffii] gi|302810705|ref|XP_002987043.1| hypothetical protein SELMODRAFT_271894 [Selaginella moellendorffii] gi|300145208|gb|EFJ11886.1| hypothetical protein SELMODRAFT_271894 [Selaginella moellendorffii] gi|300146733|gb|EFJ13401.1| hypothetical protein SELMODRAFT_181752 [Selaginella moellendorffii]

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/265 (54%), Positives = 178/265 (67%), Gaps = 36/265 (13%)

Query: 13  LTTKLKKLTITPPSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLGDPQ--------VI 64
           L ++  +L     +  + +FDF++VFG L   +         +A  G P+        VI
Sbjct: 14  LPSRPPRLDAVVAADDAGEFDFSDVFGQLPSVKEGE------AADWGQPELHYVADTLVI 67

Query: 65  HNRSHSFVGPSPRYALSSSLPLQIQELEHENDA----------ELEAESE-----RKIGP 109
            +RSHS VGPSPR +L    PL+  E    +DA          ++E + E     RK+GP
Sbjct: 68  CSRSHSLVGPSPRPSLRVGCPLE--ECAAGDDAGEDSDFSDAVDVEQQQEFDDTTRKLGP 125

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           GDFE+  +VGQGAFGKVFQV+ KG  D     IYAMKVMRKD +++KN+VDYMKAERDI+
Sbjct: 126 GDFELLNLVGQGAFGKVFQVRLKGSSD-----IYAMKVMRKDKVLEKNYVDYMKAERDIM 180

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           TK+ HPFIVQLR SFQT++KLYLILDFINGGHLFF LYRQG F ED  R Y AEIVSAV+
Sbjct: 181 TKIVHPFIVQLRCSFQTKTKLYLILDFINGGHLFFQLYRQGTFSEDLCRVYAAEIVSAVA 240

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           HLH  GIVHRDLKPENIL+D+DGHV
Sbjct: 241 HLHSKGIVHRDLKPENILLDADGHV 265

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2077873	465	PK1 "protein-serine kinase 1"	0.563	0.341	0.634	6.1e-58
TAIR|locus:2077843	471	S6K2 "serine/threonine protein	0.780	0.467	0.516	4.4e-52
UNIPROTKB|E1BZK5	364	SGK2 "Uncharacterized protein"	0.503	0.390	0.493	1.7e-38
DICTYBASE|DDB_G0290157	479	pkgB "SGK family protein kinas	0.560	0.329	0.481	1.9e-37
MGI|MGI:1351318	367	Sgk2 "serum/glucocorticoid reg	0.503	0.386	0.479	6.4e-37
RGD|620232	367	Sgk2 "serum/glucocorticoid reg	0.503	0.386	0.479	8.2e-37
UNIPROTKB|Q8R4U9	367	Sgk2 "Serine/threonine-protein	0.503	0.386	0.479	8.2e-37
UNIPROTKB|F2Z3C8	285	SGK2 "Serine/threonine-protein	0.503	0.498	0.479	8.2e-37
UNIPROTKB|Q9HBY8	427	SGK2 "Serine/threonine-protein	0.503	0.332	0.479	8.2e-37
UNIPROTKB|I3LUF0	371	SGK2 "Uncharacterized protein"	0.503	0.382	0.479	2.7e-36

TAIR|locus:2077873 PK1 "protein-serine kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 535 (193.4 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
 Identities = 106/167 (63%), Positives = 127/167 (76%)

Query:    92 EHENDAELEAESERK---IGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVM 148
             + +N+  LE +  +    +G  DFE+ +VVG+GAF                  IYAMKVM
Sbjct:   111 DSDNEKALEGDLVKVSGVVGIDDFEVMKVVGKGAFGKVYQVRKKETSE-----IYAMKVM 165

Query:   149 RKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR 208
             RKD I++KNH +YMKAERDILTK+ HPFIVQL+YSFQT+ +LYL+LDFINGGHLFF LY 
Sbjct:   166 RKDHIMEKNHAEYMKAERDILTKIDHPFIVQLKYSFQTKYRLYLVLDFINGGHLFFQLYH 225

Query:   209 QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
             QG+FRED AR YTAEIVSAVSHLH+ GI+HRDLKPENILMD+DGHVM
Sbjct:   226 QGLFREDLARVYTAEIVSAVSHLHEKGIMHRDLKPENILMDTDGHVM 272

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=IMP;IDA

GO:0045727 "positive regulation of translation" evidence=RCA;TAS

GO:0009409 "response to cold" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

TAIR|locus:2077843 S6K2 "serine/threonine protein kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 127/246 (51%), Positives = 154/246 (62%)

Query:    31 DFDFTEVFGPLTP------CRHNNQSPA---STSASLGDPQVIHNRSHSFVGPSPRYALS 81
             +  F++VFGP+        C      PA   S S SL  P ++ + S      + R    
Sbjct:    38 ELQFSDVFGPMPEANSEEACDVAYDEPAVVYSRSHSLVGPSLVVSHSLKMNKLTLRETED 97

Query:    82 SSLPLQIQELEH--END---AELEAESERK-------IGPGDFEIFRVVGQGAFXXXXXX 129
             S   ++  E E   END      + +SE+        +G  DFE+ +VVGQGAF      
Sbjct:    98 SVDLVECVEGESIKENDEFSGNDDTDSEKSPEEVSGVVGIEDFEVLKVVGQGAFGKVYQV 157

Query:   130 XXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK 189
                         IYAMKVMRKD I++KNH +YMKAERDILTK+ HPFIVQL+YSFQT+ +
Sbjct:   158 RKKDTSE-----IYAMKVMRKDKIVEKNHAEYMKAERDILTKIDHPFIVQLKYSFQTKYR 212

Query:   190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
             LYL+LDFINGGHLFF LY QG+FRED AR YTAEIVSAVSHLH+ GI+HRDLKPENILMD
Sbjct:   213 LYLVLDFINGGHLFFQLYHQGLFREDLARVYTAEIVSAVSHLHEKGIMHRDLKPENILMD 272

Query:   250 SDGHVM 255
              DGHVM
Sbjct:   273 VDGHVM 278

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0045727 "positive regulation of translation" evidence=RCA;TAS

GO:0009409 "response to cold" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009408 "response to heat" evidence=IEP

UNIPROTKB|E1BZK5 SGK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 384 (140.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
 Identities = 73/148 (49%), Positives = 99/148 (66%)

Query:   109 PGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDI 168
             P DF+  +V+G+G+F                   YA+KV+ K TI+KK   +++ AER++
Sbjct:    32 PTDFDFLKVIGKGSFGKVLLAKRKSDGT-----FYAVKVLHKKTILKKKEQNHIMAERNV 86

Query:   169 LTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
             L K V HPF+V L YSFQT  KLY +LD++NGG LFFHL R+  FRE +ARFY AE+ SA
Sbjct:    87 LLKNVKHPFLVGLHYSFQTSEKLYFVLDYVNGGELFFHLQRERCFREPRARFYAAEVASA 146

Query:   228 VSHLHKCGIVHRDLKPENILMDSDGHVM 255
             + +LH   I++RDLKPENIL+D  GHV+
Sbjct:   147 IGYLHSLNIIYRDLKPENILLDCQGHVV 174

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0015459 "potassium channel regulator activity" evidence=IEA

DICTYBASE|DDB_G0290157 pkgB "SGK family protein kinase PkgB" [Dictyostelium discoideum (taxid:44689)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 79/164 (48%), Positives = 111/164 (67%)

Query:    92 EHENDAE-LEAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRK 150
             E E   E + +++++     DFE+  V+G+G+F                  I+AMKV+RK
Sbjct:   132 EDEGPEEVIFSKNKQSATKDDFELLNVIGKGSFGKVMQVKKKGEDK-----IFAMKVLRK 186

Query:   151 DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG 210
             D II +  V++ K+E+ IL  ++HPFIV L Y+FQT+ KLY++LDF+NGG LFFHL R+G
Sbjct:   187 DAIIARKQVNHTKSEKTILQCISHPFIVNLHYAFQTKDKLYMVLDFVNGGELFFHLKREG 246

Query:   211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              F E + + Y AEIVSA+ HLHK  IV+RDLKPENIL+DS+GH+
Sbjct:   247 RFSEPRVKIYAAEIVSALDHLHKQDIVYRDLKPENILLDSEGHI 290

GO:0006468 "protein phosphorylation" evidence=IEA;IGI;IDA

GO:0043327 "chemotaxis to cAMP" evidence=IGI

GO:0031288 "sorocarp morphogenesis" evidence=IMP

GO:0005886 "plasma membrane" evidence=IEA;IDA

GO:0004691 "cAMP-dependent protein kinase activity" evidence=IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006935 "chemotaxis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

MGI|MGI:1351318 Sgk2 "serum/glucocorticoid regulated kinase 2" [Mus musculus (taxid:10090)]

 Score = 370 (135.3 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
 Identities = 71/148 (47%), Positives = 99/148 (66%)

Query:   109 PGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDI 168
             P DF+  +V+G+G +                   YA+KV++K +I+K    +++ AER++
Sbjct:    32 PTDFDFLKVIGKGNYGKVLLAKRKSDGA-----FYAVKVLQKKSILKNKEQNHIMAERNV 86

Query:   169 LTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
             L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFYTAE+ SA
Sbjct:    87 LLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQRERRFLEPRARFYTAEVASA 146

Query:   228 VSHLHKCGIVHRDLKPENILMDSDGHVM 255
             + +LH   I++RDLKPENIL+D  GHV+
Sbjct:   147 IGYLHSLNIIYRDLKPENILLDCQGHVV 174

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0015459 "potassium channel regulator activity" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

RGD|620232 Sgk2 "serum/glucocorticoid regulated kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 369 (135.0 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 71/148 (47%), Positives = 98/148 (66%)

Query:   109 PGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDI 168
             P DF+  +V+G+G +                   YA+KV++K +I+K     ++ AER++
Sbjct:    32 PTDFDFLKVIGKGNYGKVLLAKRKSDGA-----FYAVKVLQKKSILKNKEQSHIMAERNV 86

Query:   169 LTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
             L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFYTAE+ SA
Sbjct:    87 LLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQREHRFLEPRARFYTAEVASA 146

Query:   228 VSHLHKCGIVHRDLKPENILMDSDGHVM 255
             + +LH   I++RDLKPENIL+D  GHV+
Sbjct:   147 IGYLHSLNIIYRDLKPENILLDCQGHVV 174

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0015459 "potassium channel regulator activity" evidence=ISO;ISS

UNIPROTKB|Q8R4U9 Sgk2 "Serine/threonine-protein kinase Sgk2" [Rattus norvegicus (taxid:10116)]

 Score = 369 (135.0 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 71/148 (47%), Positives = 98/148 (66%)

Query:   109 PGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDI 168
             P DF+  +V+G+G +                   YA+KV++K +I+K     ++ AER++
Sbjct:    32 PTDFDFLKVIGKGNYGKVLLAKRKSDGA-----FYAVKVLQKKSILKNKEQSHIMAERNV 86

Query:   169 LTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
             L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFYTAE+ SA
Sbjct:    87 LLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQREHRFLEPRARFYTAEVASA 146

Query:   228 VSHLHKCGIVHRDLKPENILMDSDGHVM 255
             + +LH   I++RDLKPENIL+D  GHV+
Sbjct:   147 IGYLHSLNIIYRDLKPENILLDCQGHVV 174

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F2Z3C8 SGK2 "Serine/threonine-protein kinase Sgk2" [Homo sapiens (taxid:9606)]

 Score = 368 (134.6 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 71/148 (47%), Positives = 97/148 (65%)

Query:   109 PGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDI 168
             P DF+  +V+G+G +                   YA+KV++K +I+KK    ++ AER +
Sbjct:    32 PTDFDFLKVIGKGNYGKVLLAKRKSDGA-----FYAVKVLQKKSILKKKEQSHIMAERSV 86

Query:   169 LTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
             L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFY AE+ SA
Sbjct:    87 LLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQRERRFLEPRARFYAAEVASA 146

Query:   228 VSHLHKCGIVHRDLKPENILMDSDGHVM 255
             + +LH   I++RDLKPENIL+D  GHV+
Sbjct:   147 IGYLHSLNIIYRDLKPENILLDCQGHVV 174

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q9HBY8 SGK2 "Serine/threonine-protein kinase Sgk2" [Homo sapiens (taxid:9606)]

 Score = 368 (134.6 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 71/148 (47%), Positives = 97/148 (65%)

Query:   109 PGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDI 168
             P DF+  +V+G+G +                   YA+KV++K +I+KK    ++ AER +
Sbjct:    92 PTDFDFLKVIGKGNYGKVLLAKRKSDGA-----FYAVKVLQKKSILKKKEQSHIMAERSV 146

Query:   169 LTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
             L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFY AE+ SA
Sbjct:   147 LLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQRERRFLEPRARFYAAEVASA 206

Query:   228 VSHLHKCGIVHRDLKPENILMDSDGHVM 255
             + +LH   I++RDLKPENIL+D  GHV+
Sbjct:   207 IGYLHSLNIIYRDLKPENILLDCQGHVV 234

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0015459 "potassium channel regulator activity" evidence=IDA

GO:0017080 "sodium channel regulator activity" evidence=NAS;TAS

GO:0005575 "cellular_component" evidence=ND

GO:0042127 "regulation of cell proliferation" evidence=TAS

GO:0001558 "regulation of cell growth" evidence=TAS

GO:0032411 "positive regulation of transporter activity" evidence=TAS

GO:0006979 "response to oxidative stress" evidence=TAS

GO:0007243 "intracellular protein kinase cascade" evidence=TAS

UNIPROTKB|I3LUF0 SGK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 364 (133.2 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 71/148 (47%), Positives = 97/148 (65%)

Query:   109 PGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDI 168
             P DF+  +V+G+G +                   YA+KV++K +I+KK    ++ AER +
Sbjct:    38 PTDFDFLKVIGKGNYGKVLLAKHKSDGM-----FYAVKVLQKKSILKKKEQGHIMAERSV 92

Query:   169 LTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
             L K V HPF+V LRYSFQT  KLY +LD++NGG LFFHL R+  F E +ARFY AE+ SA
Sbjct:    93 LLKNVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQRERRFLEPRARFYAAEVASA 152

Query:   228 VSHLHKCGIVHRDLKPENILMDSDGHVM 255
             + +LH   I++RDLKPENIL+D  GHV+
Sbjct:   153 IGYLHSLHIIYRDLKPENILLDCQGHVV 180

GO:0015459 "potassium channel regulator activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-76
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-58
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-56
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-56
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	9e-56
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-54
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-54
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	8e-54
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-53
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-52
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-50
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-49
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-49
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	4e-49
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-48
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-47
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-47
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-47
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-46
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-45
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-45
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-45
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-44
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-44
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-43
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	3e-43
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-42
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	5e-42
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-41
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	6e-41
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-40
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-39
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-39
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-38
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-38
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-38
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-38
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	3e-38
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	7e-38
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-37
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-37
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	9e-37
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	9e-37
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	4e-36
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-35
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-35
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-35
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	5e-35
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-34
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-34
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	6e-34
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-34
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	9e-34
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-33
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-32
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-32
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-32
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-32
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	3e-32
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	9e-32
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	5e-31
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-30
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-30
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	4e-30
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	9e-30
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-29
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-29
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	5e-29
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	6e-29
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-27
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	5e-27
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-27
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-26
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-23
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-21
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-21
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-20
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-19
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-19
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-19
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-19
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-19
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-19
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-19
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-18
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-18
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	9e-18
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-17
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-17
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-17
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-17
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-16
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-16
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-16
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-16
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-16
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-16
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	9e-16
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-15
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-15
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-15
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-15
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-15
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	4e-15
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-14
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-14
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-14
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	8e-14
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-13
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-13
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-13
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	7e-13
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	7e-13
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-12
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-12
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-12
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-12
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-12
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	6e-12
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	7e-12
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-11
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-11
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-11
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-11
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-11
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-11
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-11
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-11
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	7e-11
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	8e-11
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-11
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-10
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-10
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-10
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-10
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	7e-10
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	9e-10
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-09
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-09
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-09
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-09
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-09
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-09
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-09
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-09
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-09
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	6e-09
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	9e-09
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-08
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-08
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-08
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-08
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	4e-08
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	4e-08
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	5e-08
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	7e-08
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	7e-08
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	8e-08
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	8e-08
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-07
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-07
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-07
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-07
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-07
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-07
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-07
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-07
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	4e-07
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-07
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	6e-07
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	6e-07
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	9e-07
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-06
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-06
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-06
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-06
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-06
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	3e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-06
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	4e-06
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	4e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	5e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	5e-06
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	6e-06
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	6e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	8e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	8e-06
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-05
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-05
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-05
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	2e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-05
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	3e-05
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	3e-05
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	3e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	4e-05
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	4e-05
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	4e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	6e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	7e-05
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	7e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	7e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	8e-05
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	8e-05
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	9e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	9e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-04
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	1e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-04
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	3e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	4e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	4e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-04
PRK09188	365	PRK09188, PRK09188, serine/threonine protein kinas	5e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	6e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	6e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	6e-04
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	7e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	7e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	7e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.001
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	0.001
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.001
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.001
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.001
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.002
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.002
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.002
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	0.003
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.003
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.003
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.004

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  232 bits (594), Expect = 2e-76
 Identities = 74/138 (53%), Positives = 105/138 (76%), Gaps = 5/138 (3%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G+FGKV  V+KK     D+  +YAMKV++K  IIK+  V++   ER+IL+++ HPFI
Sbjct: 1   LGKGSFGKVLLVRKK-----DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFI 55

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIV 237
           V+L Y+FQT  KLYL+L++  GG LF HL ++G F E++ARFY AEIV A+ +LH  GI+
Sbjct: 56  VKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGII 115

Query: 238 HRDLKPENILMDSDGHVM 255
           +RDLKPENIL+D+DGH+ 
Sbjct: 116 YRDLKPENILLDADGHIK 133

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  188 bits (479), Expect = 2e-58
 Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE  + +G G+FG+V  V+ K      S   YA+K++ K  I+K   V+++  E+ IL 
Sbjct: 2   DFEFIKTLGTGSFGRVMLVRHK-----GSGKYYALKILSKAKIVKLKQVEHVLNEKRILQ 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HPF+V L  SFQ  S LYL+++++ GG LF HL + G F E  ARFY A++V A+ +
Sbjct: 57  SIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEY 116

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH   IV+RDLKPEN+L+DSDG++
Sbjct: 117 LHSLDIVYRDLKPENLLLDSDGYI 140

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  184 bits (469), Expect = 2e-56
 Identities = 70/145 (48%), Positives = 105/145 (72%), Gaps = 5/145 (3%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            DFE+ +V+G+GAFG+V+ V+ K     D+  +YAMKV+RK  +IK+N + +++AERDIL
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDK-----DTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL 55

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
                P+IV+L YSFQ    LYL+++++ GG L   L R+ +F E+ ARFY AE+V A+ 
Sbjct: 56  ADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALD 115

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
            +HK G +HRD+KP+NIL+D+DGH+
Sbjct: 116 SVHKLGFIHRDIKPDNILIDADGHI 140

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  183 bits (466), Expect = 3e-56
 Identities = 81/141 (57%), Positives = 107/141 (75%), Gaps = 5/141 (3%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD--YMKAERDILTKVT 173
           +V+G+G +GKVFQV+K  V   D+  I+AMKV++K TI++ N  D  + KAER+IL  V 
Sbjct: 2   KVLGKGGYGKVFQVRK--VTGADTGKIFAMKVLKKATIVR-NQKDTAHTKAERNILEAVK 58

Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           HPFIV L Y+FQT  KLYLIL++++GG LF HL R+GIF ED A FY +EI  A+ HLH+
Sbjct: 59  HPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQ 118

Query: 234 CGIVHRDLKPENILMDSDGHV 254
            GI++RDLKPENIL+D+ GHV
Sbjct: 119 QGIIYRDLKPENILLDAQGHV 139

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  180 bits (458), Expect = 9e-56
 Identities = 64/144 (44%), Positives = 92/144 (63%), Gaps = 7/144 (4%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +EI   +G+G+FGKV+  + K      +  + A+KV++K  I K    + +  E  IL K
Sbjct: 1   YEILEKLGEGSFGKVYLARDK-----KTGKLVAIKVIKKKKIKKD--RERILREIKILKK 53

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP IV+L   F+   KLYL++++  GG LF  L ++G   ED+ARFY  +I+SA+ +L
Sbjct: 54  LKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYL 113

Query: 232 HKCGIVHRDLKPENILMDSDGHVM 255
           H  GIVHRDLKPENIL+D DGHV 
Sbjct: 114 HSKGIVHRDLKPENILLDEDGHVK 137

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  178 bits (453), Expect = 2e-54
 Identities = 75/140 (53%), Positives = 98/140 (70%), Gaps = 6/140 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTH 174
           +V+G+G+FGKV   K K          YA+KV++K  I+KK    ++ AER++L K V H
Sbjct: 1   KVIGKGSFGKVLLAKHK-----ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+V L YSFQT  KLY +LD++NGG LFFHL R+  F E +ARFY AEI SA+ +LH  
Sbjct: 56  PFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSL 115

Query: 235 GIVHRDLKPENILMDSDGHV 254
            I++RDLKPENIL+DS GHV
Sbjct: 116 NIIYRDLKPENILLDSQGHV 135

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  175 bits (447), Expect = 6e-54
 Identities = 58/146 (39%), Positives = 94/146 (64%), Gaps = 6/146 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F  V   K+K     +++  YA+K++ K  +IK+  V Y+K E+++LT
Sbjct: 2   DFKFGKIIGEGSFSTVVLAKEK-----ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLT 56

Query: 171 KVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           ++  HP I++L Y+FQ    LY +L++   G L  ++ + G   E   RFY AEI+ A+ 
Sbjct: 57  RLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALE 116

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVM 255
           +LH  GI+HRDLKPENIL+D D H+ 
Sbjct: 117 YLHSKGIIHRDLKPENILLDKDMHIK 142

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  175 bits (445), Expect = 8e-54
 Identities = 66/143 (46%), Positives = 96/143 (67%), Gaps = 5/143 (3%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           FE+ RV+G+GAFGKV  V+K+     D+  ++AMK M K   ++K  V  +  ER IL +
Sbjct: 2   FELLRVIGKGAFGKVCIVQKR-----DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQE 56

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HPF+V L YSFQ    +YL++D + GG L +HL ++  F E+Q +F+  EIV A+ +L
Sbjct: 57  LNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYL 116

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H  GI+HRD+KP+NIL+D  GHV
Sbjct: 117 HSKGIIHRDIKPDNILLDEQGHV 139

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  174 bits (443), Expect = 3e-53
 Identities = 76/146 (52%), Positives = 107/146 (73%), Gaps = 4/146 (2%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV-DYMKAERDIL 169
           +FE+ RV+G GA+GKVF V+K G    D+  +YAMKV++K TI++K    ++ + ER +L
Sbjct: 1   NFELLRVLGTGAYGKVFLVRKVG--GHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVL 58

Query: 170 TKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
             V   PF+V L Y+FQT +KL+LILD++NGG LF HLY++  F E + R Y AEIV A+
Sbjct: 59  EAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLAL 118

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
            HLH+ GI++RD+K ENIL+DS+GHV
Sbjct: 119 DHLHQLGIIYRDIKLENILLDSEGHV 144

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  171 bits (436), Expect = 2e-52
 Identities = 67/137 (48%), Positives = 95/137 (69%), Gaps = 5/137 (3%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           + +GA+G+VF  KKK   D     IYA+KV++K  +I+KN VD +  ERDIL++   P++
Sbjct: 1   ISKGAYGRVFLAKKKSTGD-----IYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV 55

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIV 237
           V+L YSFQ +  LYL+++++ GG L   L   G   ED AR Y AEIV A+ +LH  GI+
Sbjct: 56  VKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGII 115

Query: 238 HRDLKPENILMDSDGHV 254
           HRDLKP+NIL+DS+GH+
Sbjct: 116 HRDLKPDNILIDSNGHL 132

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  167 bits (424), Expect = 5e-50
 Identities = 74/139 (53%), Positives = 102/139 (73%), Gaps = 3/139 (2%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           +V+GQG+FGKVF V+K  +   D+  +YAMKV++K T+  ++ V   K ERDIL +V HP
Sbjct: 2   KVLGQGSFGKVFLVRK--ITGPDAGQLYAMKVLKKATLKVRDRVR-TKMERDILAEVNHP 58

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
           FIV+L Y+FQT  KLYLILDF+ GG LF  L ++ +F E+  +FY AE+  A+ HLH  G
Sbjct: 59  FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 118

Query: 236 IVHRDLKPENILMDSDGHV 254
           I++RDLKPENIL+D +GH+
Sbjct: 119 IIYRDLKPENILLDEEGHI 137

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  165 bits (419), Expect = 2e-49
 Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 5/137 (3%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G+FGKV QV+K+     D+  IYA+K +RK  I+ ++ V +  AER +L +V  PFI
Sbjct: 1   IGKGSFGKVMQVRKR-----DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFI 55

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIV 237
           V L++SFQ+  KLYL+L FINGG LF HL R+G F   +ARFYTAE++ A+ +LHK  ++
Sbjct: 56  VPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVI 115

Query: 238 HRDLKPENILMDSDGHV 254
           +RDLKPENIL+D  GH+
Sbjct: 116 YRDLKPENILLDYQGHI 132

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  166 bits (422), Expect = 3e-49
 Identities = 64/144 (44%), Positives = 102/144 (70%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE  +V+G+GAFG+V  V+KK     D+  IYAMK +RK  +++K  V +++AERDIL 
Sbjct: 2   DFESIKVIGRGAFGEVRLVQKK-----DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILA 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +  +P++V+L YSFQ  + LYLI++++ GG +   L ++  F E++ RFY AE + A+  
Sbjct: 57  EADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDS 116

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           +HK G +HRD+KP+N+L+D+ GH+
Sbjct: 117 IHKLGYIHRDIKPDNLLLDAKGHI 140

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score =  165 bits (418), Expect = 4e-49
 Identities = 77/142 (54%), Positives = 105/142 (73%), Gaps = 8/142 (5%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDILTK-VT 173
           +V+G+G+FGKV   K+K      SDG  YA+KV++K TI+KK   +++ AER++L K + 
Sbjct: 1   KVIGKGSFGKVLLAKRK------SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK 54

Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           HPF+V L YSFQT  KLY +LD++NGG LFFHL R+  F E +ARFY AE+ SA+ +LH 
Sbjct: 55  HPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHS 114

Query: 234 CGIVHRDLKPENILMDSDGHVM 255
             I++RDLKPENIL+DS GHV+
Sbjct: 115 LNIIYRDLKPENILLDSQGHVV 136

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  162 bits (411), Expect = 5e-48
 Identities = 74/147 (50%), Positives = 111/147 (75%), Gaps = 4/147 (2%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH-VDYMKAERDIL 169
           +FE+ +V+G GA+GKVF V+K  V   D+  +YAMKV++K  +++K   V++ + ER++L
Sbjct: 1   NFELLKVLGTGAYGKVFLVRK--VTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVL 58

Query: 170 TKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
             V   PF+V L Y+FQT +KL+LILD+++GG +F HLY++  F ED+ RFY+ EI+ A+
Sbjct: 59  EHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILAL 118

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVM 255
            HLHK GIV+RD+K ENIL+DS+GHV+
Sbjct: 119 EHLHKLGIVYRDIKLENILLDSEGHVV 145

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score =  161 bits (408), Expect = 1e-47
 Identities = 73/140 (52%), Positives = 101/140 (72%), Gaps = 8/140 (5%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH--- 174
           +G+G FG+V+QV+KK     D+  IYAMKV+ K  I+ K  V +   ER+IL +      
Sbjct: 1   IGKGTFGQVYQVRKK-----DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDES 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PFIV L++SFQT S LYL+ D+++GG LF+HL ++G F ED+A+FY AE+V A+ HLHK 
Sbjct: 56  PFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY 115

Query: 235 GIVHRDLKPENILMDSDGHV 254
            IV+RDLKPENIL+D+ GH+
Sbjct: 116 DIVYRDLKPENILLDATGHI 135

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score =  160 bits (406), Expect = 3e-47
 Identities = 65/139 (46%), Positives = 97/139 (69%), Gaps = 5/139 (3%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           +++G+G FGKV  V++K      +   YAMK+++K+ II K+ V +   E  +L    HP
Sbjct: 1   KLLGKGTFGKVILVREKA-----TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHP 55

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
           F+  L+YSFQT  +L  ++++ NGG LFFHL R+ +F ED+ARFY AEIVSA+ +LH C 
Sbjct: 56  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD 115

Query: 236 IVHRDLKPENILMDSDGHV 254
           +V+RDLK EN+++D DGH+
Sbjct: 116 VVYRDLKLENLMLDKDGHI 134

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  159 bits (405), Expect = 5e-47
 Identities = 65/145 (44%), Positives = 89/145 (61%), Gaps = 5/145 (3%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            DF+I   VGQG +G+VF  KKK     D+  I A+K M+K  + K N V ++  ERDIL
Sbjct: 1   KDFQILTQVGQGGYGQVFLAKKK-----DTGEIVALKRMKKSLLFKLNEVRHVLTERDIL 55

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           T     ++V+L Y+FQ    LYL ++++ GG     L   G+  ED ARFY AE+  AV 
Sbjct: 56  TTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVD 115

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
            LH+ G +HRDLKPEN L+D+ GH+
Sbjct: 116 ALHELGYIHRDLKPENFLIDASGHI 140

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  155 bits (394), Expect = 3e-46
 Identities = 55/143 (38%), Positives = 88/143 (61%), Gaps = 6/143 (4%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +E+ R +G G+FG V++ K KG        I A+K+++K +   K      + E  IL +
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGK-----IVAVKILKKRSEKSKKDQ-TARREIRILRR 54

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           ++HP IV+L  +F+ +  LYL++++  GG LF +L R G   ED+A+    +I+  + +L
Sbjct: 55  LSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYL 114

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H  GI+HRDLKPENIL+D +G V
Sbjct: 115 HSNGIIHRDLKPENILLDENGVV 137

Length = 260

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score =  157 bits (398), Expect = 1e-45
 Identities = 65/143 (45%), Positives = 96/143 (67%), Gaps = 5/143 (3%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F   + +G GAFG+V  V+K      D++ +YAMK +RK  ++ +N   ++KAERDIL +
Sbjct: 3   FVKIKTIGIGAFGEVCLVRKV-----DTNALYAMKTLRKADVLMRNQAAHVKAERDILAE 57

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
             + ++V+L YSFQ +  LY ++D+I GG +   L R GIF ED ARFY AE+  A+  +
Sbjct: 58  ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESV 117

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           HK G +HRD+KP+NIL+D DGH+
Sbjct: 118 HKMGFIHRDIKPDNILIDRDGHI 140

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score =  154 bits (390), Expect = 2e-45
 Identities = 74/147 (50%), Positives = 108/147 (73%), Gaps = 4/147 (2%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK-NHVDYMKAERDIL 169
           +FE+ +V+G GA+GKVF V+K  V   DS  +YAMKV++K TI++K    ++ + ER +L
Sbjct: 1   NFELLKVLGTGAYGKVFLVRK--VSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 58

Query: 170 TKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
             +   PF+V L Y+FQT +KL+LILD+INGG LF HL ++  F+E + + Y+ EIV A+
Sbjct: 59  EHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLAL 118

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVM 255
            HLHK GI++RD+K ENIL+DS+GHV+
Sbjct: 119 EHLHKLGIIYRDIKLENILLDSNGHVV 145

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score =  155 bits (392), Expect = 3e-45
 Identities = 76/141 (53%), Positives = 101/141 (71%), Gaps = 6/141 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTH 174
           +V+G+G+FGKV   K+K   DG     YA+KV++K  ++ +    ++ AER++L K V H
Sbjct: 1   KVIGKGSFGKVLLAKRK--LDGK---CYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+V L YSFQT  KLY +LDF+NGG LFFHL R+  F E +ARFY AEI SA+ +LH  
Sbjct: 56  PFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSI 115

Query: 235 GIVHRDLKPENILMDSDGHVM 255
            IV+RDLKPENIL+DS GHV+
Sbjct: 116 NIVYRDLKPENILLDSQGHVV 136

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score =  152 bits (385), Expect = 2e-44
 Identities = 72/141 (51%), Positives = 100/141 (70%), Gaps = 6/141 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTH 174
           +V+G+G+FGKV   + K       +  YA+KV++K  I+KK    ++ +ER++L K V H
Sbjct: 1   KVIGKGSFGKVLLARHKA-----EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+V L +SFQT  KLY +LD+INGG LF+HL R+  F E +ARFY AEI SA+ +LH  
Sbjct: 56  PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 115

Query: 235 GIVHRDLKPENILMDSDGHVM 255
            IV+RDLKPENIL+DS GH++
Sbjct: 116 NIVYRDLKPENILLDSQGHIV 136

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  151 bits (384), Expect = 5e-44
 Identities = 61/140 (43%), Positives = 97/140 (69%), Gaps = 6/140 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-H 174
           +V+G+G+FGKV   + KG D+     +YA+KV++KD I++ + V+    E+ +L     H
Sbjct: 1   KVLGKGSFGKVLLAELKGTDE-----LYAVKVLKKDVILQDDDVECTMTEKRVLALAGKH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+ QL   FQT+ +L+ +++++NGG L FH+ R G F E +ARFY AEIV  +  LH+ 
Sbjct: 56  PFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER 115

Query: 235 GIVHRDLKPENILMDSDGHV 254
           GI++RDLK +N+L+DS+GH+
Sbjct: 116 GIIYRDLKLDNVLLDSEGHI 135

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  150 bits (381), Expect = 1e-43
 Identities = 63/147 (42%), Positives = 94/147 (63%), Gaps = 7/147 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            F+  +++G+G  G+VF V+ KG     +  ++A+KV+ K  +IK+N V  +  E++IL 
Sbjct: 2   HFKKIKLLGKGDVGRVFLVRLKG-----TGKLFALKVLDKKEMIKRNKVKRVLTEQEILA 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAV 228
            + HPF+  L  SFQT + L L++D+  GG LF  L RQ      E+ ARFY AE++ A+
Sbjct: 57  TLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLAL 116

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVM 255
            +LH  GIV+RDLKPENIL+   GH+M
Sbjct: 117 EYLHLLGIVYRDLKPENILLHESGHIM 143

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  151 bits (382), Expect = 3e-43
 Identities = 68/144 (47%), Positives = 94/144 (65%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF   +V+G+GAFG+V  V+KK  D G    IYAMK + K  + KK+ + ++KAERD+L 
Sbjct: 2   DFHTVKVIGKGAFGEVRLVQKK--DTGK---IYAMKTLLKSEMFKKDQLAHVKAERDVLA 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +   P++V L YSFQ    LYLI++F+ GG L   L +   F ED  RFY AE V A+  
Sbjct: 57  ESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEA 116

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           +HK G +HRD+KP+NIL+D  GH+
Sbjct: 117 VHKLGFIHRDIKPDNILIDRGGHI 140

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  148 bits (374), Expect = 1e-42
 Identities = 63/144 (43%), Positives = 94/144 (65%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE+   +G G+FG+V   K KG  +      YA+K ++K  I+K   V ++  E+ IL 
Sbjct: 19  DFEMGETLGTGSFGRVRIAKHKGTGE-----YYAIKCLKKREILKMKQVQHVAQEKSILM 73

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +++HPFIV +  SFQ  +++Y +L+F+ GG LF HL + G F  D A+FY AE+V A  +
Sbjct: 74  ELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEY 133

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH   I++RDLKPEN+L+D+ GHV
Sbjct: 134 LHSKDIIYRDLKPENLLLDNKGHV 157

Length = 329

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score =  146 bits (370), Expect = 5e-42
 Identities = 62/139 (44%), Positives = 96/139 (69%), Gaps = 5/139 (3%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           +++G+G FGKV  V++K      +   YAMK++RK+ II K+ V +   E  +L    HP
Sbjct: 1   KLLGKGTFGKVILVREKA-----TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 55

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
           F+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIVSA+ +LH   
Sbjct: 56  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 115

Query: 236 IVHRDLKPENILMDSDGHV 254
           +V+RD+K EN+++D DGH+
Sbjct: 116 VVYRDIKLENLMLDKDGHI 134

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score =  144 bits (364), Expect = 5e-41
 Identities = 64/145 (44%), Positives = 96/145 (66%), Gaps = 6/145 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF++  +VG+G FG+V  V++K   D     IYAMKVM+K  ++ +  V + + ERDIL+
Sbjct: 2   DFDVKSLVGRGHFGEVQVVREKATGD-----IYAMKVMKKSVLLAQETVSFFEEERDILS 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVS 229
               P+I QL+Y+FQ +  LYL++++  GG L   L R +  F ED A+FY AE+V A+ 
Sbjct: 57  ISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIH 116

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
            +H+ G VHRD+KPEN+L+D  GH+
Sbjct: 117 SVHQMGYVHRDIKPENVLIDRTGHI 141

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score =  144 bits (363), Expect = 6e-41
 Identities = 65/139 (46%), Positives = 97/139 (69%), Gaps = 5/139 (3%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           +++G+G FGKV  V++K      S   YAMK+++K+ II K+ V +   E  +L    HP
Sbjct: 1   KLLGKGTFGKVILVREKA-----SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHP 55

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
           F+  L+YSFQT+ +L  +++++NGG LFFHL R+ +F ED+ RFY AEIVSA+ +LH   
Sbjct: 56  FLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK 115

Query: 236 IVHRDLKPENILMDSDGHV 254
           IV+RDLK EN+++D DGH+
Sbjct: 116 IVYRDLKLENLMLDKDGHI 134

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score =  143 bits (362), Expect = 2e-40
 Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 5/143 (3%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F   + +G GAFG+V   +K      D+  +YAMK +RK  ++ +N V ++KAERDIL +
Sbjct: 3   FVKIKTLGIGAFGEVCLARKV-----DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE 57

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
             + ++V+L YSFQ +  LY ++D+I GG +   L R GIF ED ARFY AE+  AV  +
Sbjct: 58  ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESV 117

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           HK G +HRD+KP+NIL+D DGH+
Sbjct: 118 HKMGFIHRDIKPDNILIDRDGHI 140

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score =  139 bits (351), Expect = 3e-39
 Identities = 58/143 (40%), Positives = 94/143 (65%), Gaps = 6/143 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT-KVTH 174
           +V+G+G+FGKV   + KG D+     +YA+KV++KD I++ + VD    E+ IL     H
Sbjct: 1   KVLGKGSFGKVMLAELKGTDE-----VYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+  L   FQT+ +L+ +++++NGG L F + R   F E ++RFY AE+  A+  LH+ 
Sbjct: 56  PFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH 115

Query: 235 GIVHRDLKPENILMDSDGHVMAA 257
           G+++RDLK +NIL+D++GH   A
Sbjct: 116 GVIYRDLKLDNILLDAEGHCKLA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  138 bits (349), Expect = 4e-39
 Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D E  + VG G FG+V  V+ +      S+  YA+KVM    +I+     ++  E+ +L 
Sbjct: 2   DLERIKTVGTGTFGRVHLVRDRI-----SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLK 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +V+HPFI++L ++   +  LY++++++ GG LF +L   G F      FY +EIV A+ +
Sbjct: 57  EVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEY 116

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH   IV+RDLKPENIL+D +GH+
Sbjct: 117 LHSKEIVYRDLKPENILLDKEGHI 140

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  135 bits (343), Expect = 1e-38
 Identities = 53/137 (38%), Positives = 90/137 (65%), Gaps = 5/137 (3%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G G FG+V  VK K       +  +A+K ++K  I++    +++ +E++IL +  HPFI
Sbjct: 1   LGVGGFGRVELVKVKS-----KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFI 55

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIV 237
           V+L  +F+ +  +Y+++++  GG L+  L  +G+F E  ARFY A +V A  +LH  GI+
Sbjct: 56  VKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGII 115

Query: 238 HRDLKPENILMDSDGHV 254
           +RDLKPEN+L+DS+G+V
Sbjct: 116 YRDLKPENLLLDSNGYV 132

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score =  137 bits (346), Expect = 1e-38
 Identities = 61/139 (43%), Positives = 93/139 (66%), Gaps = 6/139 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-TH 174
           RV+G+G+FGKV   + K     +S  +YA+KV++KD I++ + V+    E+ IL+    H
Sbjct: 1   RVLGKGSFGKVMLARLK-----ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+ QL   FQT  +L+ +++F+NGG L FH+ +   F E +ARFY AEI SA+  LH  
Sbjct: 56  PFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK 115

Query: 235 GIVHRDLKPENILMDSDGH 253
           GI++RDLK +N+L+D +GH
Sbjct: 116 GIIYRDLKLDNVLLDHEGH 134

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score =  137 bits (346), Expect = 2e-38
 Identities = 64/140 (45%), Positives = 97/140 (69%), Gaps = 6/140 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           +++G+G FGKV  VK+K      +   YAMK+++K+ I+ K+ V +   E  +L    HP
Sbjct: 1   KLLGKGTFGKVILVKEKA-----TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 55

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH-KC 234
           F+  L+YSFQT  +L  ++++ NGG LFFHL R+ +F ED+ARFY AEIVSA+ +LH + 
Sbjct: 56  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 115

Query: 235 GIVHRDLKPENILMDSDGHV 254
            +V+RDLK EN+++D DGH+
Sbjct: 116 NVVYRDLKLENLMLDKDGHI 135

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score =  136 bits (343), Expect = 2e-38
 Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 7/139 (5%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G FG+V   + K      +  +YA K + K  + K+        E+ IL KV+  FI
Sbjct: 1   LGKGGFGEVCACQVK-----ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFI 55

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCG 235
           V L Y+F+T+  L L++  +NGG L +H+Y  G   F E +A FY A+I+  + HLH+  
Sbjct: 56  VSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR 115

Query: 236 IVHRDLKPENILMDSDGHV 254
           IV+RDLKPEN+L+D  G+V
Sbjct: 116 IVYRDLKPENVLLDDHGNV 134

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score =  137 bits (347), Expect = 3e-38
 Identities = 62/144 (43%), Positives = 99/144 (68%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE  +V+G+GAFG+V  V+KK     D+  IYAMK++RK  +++K  V +++AERDIL 
Sbjct: 2   DFESLKVIGRGAFGEVRLVQKK-----DTGHIYAMKILRKADMLEKEQVAHIRAERDILV 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +    ++V++ YSFQ +  LYLI++F+ GG +   L ++    E+  +FY AE V A+  
Sbjct: 57  EADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDA 116

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           +H+ G +HRD+KP+N+L+D+ GHV
Sbjct: 117 IHQLGFIHRDIKPDNLLLDAKGHV 140

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score =  136 bits (344), Expect = 7e-38
 Identities = 62/144 (43%), Positives = 100/144 (69%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE  +V+G+GAFG+V  V+KK     D+  +YAMK++RK  +++K  V +++AERDIL 
Sbjct: 2   DFESLKVIGRGAFGEVRLVQKK-----DTGHVYAMKILRKADMLEKEQVGHIRAERDILV 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +    ++V++ YSFQ +  LYLI++F+ GG +   L ++    E++ +FY AE V A+  
Sbjct: 57  EADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDS 116

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           +H+ G +HRD+KP+N+L+DS GHV
Sbjct: 117 IHQLGFIHRDIKPDNLLLDSKGHV 140

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score =  135 bits (342), Expect = 2e-37
 Identities = 62/143 (43%), Positives = 92/143 (64%), Gaps = 5/143 (3%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F   + +G GAFG+V    K      D+  +YAMK +RK  ++ +N V ++KAERDIL +
Sbjct: 3   FVKIKTLGIGAFGEVCLACKV-----DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE 57

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
             + ++V+L YSFQ +  LY ++D+I GG +   L R  +F E  ARFY AE+  A+  +
Sbjct: 58  ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESV 117

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           HK G +HRD+KP+NIL+D DGH+
Sbjct: 118 HKMGFIHRDIKPDNILIDLDGHI 140

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score =  134 bits (339), Expect = 2e-37
 Identities = 58/148 (39%), Positives = 95/148 (64%), Gaps = 6/148 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF    V+G+G+FGKV   ++KG     +D +YA+K+++KD II+ + V+    E+ +L 
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKG-----TDELYAIKILKKDVIIQDDDVECTMVEKRVLA 55

Query: 171 KVTHP-FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
               P F+ QL   FQT  +LY +++++NGG L +H+ + G F+E  A FY AEI   + 
Sbjct: 56  LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF 115

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            LH  GI++RDLK +N+++D++GH+  A
Sbjct: 116 FLHSKGIIYRDLKLDNVMLDAEGHIKIA 143

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score =  137 bits (347), Expect = 9e-37
 Identities = 59/146 (40%), Positives = 97/146 (66%), Gaps = 9/146 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           +F I + + +GAFGKV+  +KK     ++  +YA+KV++K  +I KN V  ++AERD L 
Sbjct: 5   EFVIVKPISRGAFGKVYLGRKK-----NNSKLYAVKVVKKADMINKNMVHQVQAERDALA 59

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEIVSAV 228
               PFIV L YS Q+ + +YL+++++ GG +    H+Y  G F E+ A  Y +E+  A+
Sbjct: 60  LSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALAL 117

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
            +LH+ GI+HRDLKP+N+L+ ++GH+
Sbjct: 118 DYLHRHGIIHRDLKPDNMLISNEGHI 143

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score =  132 bits (334), Expect = 9e-37
 Identities = 58/140 (41%), Positives = 96/140 (68%), Gaps = 6/140 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL-TKVTH 174
           RV+G+G++ KV  V+ K      +  IYAMKV++K+ +     +D+++ E+ +  T   H
Sbjct: 1   RVIGRGSYAKVLLVELK-----KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+V L   FQT S+L+ +++F++GG L FH+ RQ    E+ ARFY+AEI  A++ LH+ 
Sbjct: 56  PFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER 115

Query: 235 GIVHRDLKPENILMDSDGHV 254
           GI++RDLK +N+L+D++GH+
Sbjct: 116 GIIYRDLKLDNVLLDAEGHI 135

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score =  131 bits (330), Expect = 4e-36
 Identities = 61/148 (41%), Positives = 91/148 (61%), Gaps = 6/148 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI +V+G+GAFG+V  VK K         +YAMK++ K  ++K+      + ERD+L 
Sbjct: 2   DFEILKVIGRGAFGEVAVVKMKNTGQ-----VYAMKILNKWEMLKRAETACFREERDVLV 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVS 229
                +I  L Y+FQ  + LYL++D+  GG L   L + +    ED ARFY AE+V A+ 
Sbjct: 57  NGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAID 116

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +H+ G VHRD+KP+N+L+D +GH+  A
Sbjct: 117 SVHQLGYVHRDIKPDNVLLDKNGHIRLA 144

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score =  130 bits (327), Expect = 1e-35
 Identities = 58/140 (41%), Positives = 99/140 (70%), Gaps = 6/140 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-H 174
           RV+G+G++ KV  V+ K      ++ IYAMKV++K+ +     +D+++ E+ +  + + H
Sbjct: 1   RVIGRGSYAKVLLVRLK-----KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+V L   FQT S+L+ +++++NGG L FH+ RQ    E+ ARFY+AEI  A+++LH+ 
Sbjct: 56  PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 115

Query: 235 GIVHRDLKPENILMDSDGHV 254
           GI++RDLK +N+L+DS+GH+
Sbjct: 116 GIIYRDLKLDNVLLDSEGHI 135

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  130 bits (329), Expect = 1e-35
 Identities = 59/147 (40%), Positives = 92/147 (62%), Gaps = 6/147 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF++ +V+G+GAFG+V  V+ K      S  +YAMK++ K  +IK++   +   ERDI+ 
Sbjct: 44  DFDVIKVIGRGAFGEVQLVRHK-----SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMA 98

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
                +IVQL Y+FQ    LY++++++ GG L   +    I  E  ARFYTAE+V A+  
Sbjct: 99  HANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDI-PEKWARFYTAEVVLALDA 157

Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
           +H  G +HRD+KP+N+L+D  GH+  A
Sbjct: 158 IHSMGFIHRDVKPDNMLLDKSGHLKLA 184

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score =  128 bits (323), Expect = 4e-35
 Identities = 59/140 (42%), Positives = 98/140 (70%), Gaps = 6/140 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-TH 174
           RV+G+G++ KV  V+ K      +D IYAMKV++K+ +     +D+++ E+ +  +  ++
Sbjct: 1   RVIGRGSYAKVLLVRLK-----KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSN 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+V L   FQT S+L+L+++++NGG L FH+ RQ    E+ ARFY AEI  A++ LH+ 
Sbjct: 56  PFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER 115

Query: 235 GIVHRDLKPENILMDSDGHV 254
           GI++RDLK +N+L+D+DGH+
Sbjct: 116 GIIYRDLKLDNVLLDADGHI 135

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score =  127 bits (322), Expect = 5e-35
 Identities = 57/143 (39%), Positives = 93/143 (65%), Gaps = 6/143 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-H 174
           +V+G+G+FGKV   + KG ++      +A+K ++KD +++ + V+    ER +L     H
Sbjct: 1   KVLGKGSFGKVMLAELKGTNE-----FFAIKALKKDVVLEDDDVECTMVERRVLALAWEH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+  L  +FQT+  L+ +++++NGG L FH+   G F E +ARFY AEI+  +  LHK 
Sbjct: 56  PFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK 115

Query: 235 GIVHRDLKPENILMDSDGHVMAA 257
           GI++RDLK +N+L+D DGH+  A
Sbjct: 116 GIIYRDLKLDNVLLDKDGHIKIA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  124 bits (313), Expect = 3e-34
 Identities = 57/138 (41%), Positives = 88/138 (63%), Gaps = 6/138 (4%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL-TKVTHPF 176
           + +GAFG V+  KK+   D      +A+KV++K  +I KN V  +KAER I+  +   P+
Sbjct: 4   ISKGAFGSVYLAKKRSTGD-----YFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPY 58

Query: 177 IVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGI 236
           + +L YSFQ++  LYL+++++NGG     +   G   ED A+ Y AE+V  V  LH+ GI
Sbjct: 59  VAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGI 118

Query: 237 VHRDLKPENILMDSDGHV 254
           +HRD+KPEN+L+D  GH+
Sbjct: 119 IHRDIKPENLLIDQTGHL 136

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score =  125 bits (316), Expect = 4e-34
 Identities = 59/148 (39%), Positives = 97/148 (65%), Gaps = 6/148 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF    V+G+G+FGKV   ++KG D+     +YA+K+++KD +I+ + V+    E+ +L 
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDE-----LYAIKILKKDVVIQDDDVECTMVEKRVLA 55

Query: 171 KVTHP-FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
               P F+ QL   FQT  +LY +++++NGG L +H+ + G F+E QA FY AEI   + 
Sbjct: 56  LQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLF 115

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            LH+ GI++RDLK +N+++DS+GH+  A
Sbjct: 116 FLHRRGIIYRDLKLDNVMLDSEGHIKIA 143

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score =  125 bits (314), Expect = 6e-34
 Identities = 57/148 (38%), Positives = 94/148 (63%), Gaps = 6/148 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF    V+G+G+FGKV   ++KG D+     +YA+K+++KD +I+ + V+    E+ +L 
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDE-----LYAIKILKKDVVIQDDDVECTMVEKRVLA 55

Query: 171 -KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
                PF+ QL   FQT  +LY +++++NGG L + + + G F+E  A FY AEI   + 
Sbjct: 56  LSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF 115

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            LH  GI++RDLK +N+++DS+GH+  A
Sbjct: 116 FLHSKGIIYRDLKLDNVMLDSEGHIKIA 143

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score =  123 bits (311), Expect = 9e-34
 Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 13/148 (8%)

Query: 112 FEIFRVVGQGAFGKVF--QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA-ERDI 168
           F  +RV+G+G FG+V   QV+  G        +YA K + K  I KK   + M   E+ I
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATG-------KMYACKKLEKKRI-KKRKGEAMALNEKQI 53

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVS 226
           L KV   F+V L Y+++T+  L L+L  +NGG L FH+Y  G   F E++A FY AEI  
Sbjct: 54  LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITC 113

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHV 254
            +  LH+  IV+RDLKPENIL+D  GH+
Sbjct: 114 GLEDLHRERIVYRDLKPENILLDDYGHI 141

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  122 bits (310), Expect = 9e-34
 Identities = 49/149 (32%), Positives = 87/149 (58%), Gaps = 12/149 (8%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            +EI + +G+G+FGKV+ V++K      SDG +Y +K +    + +K   D +  E  IL
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRK------SDGKLYVLKEIDLSNMSEKEREDALN-EVKIL 53

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI----FREDQARFYTAEIV 225
            K+ HP I++   SF+ + KL +++++ +GG L   + +Q      F E+Q   +  ++ 
Sbjct: 54  KKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLC 113

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            A+ +LH   I+HRD+KP+NI + S+G V
Sbjct: 114 LALKYLHSRKILHRDIKPQNIFLTSNGLV 142

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  119 bits (300), Expect = 8e-33
 Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 8/135 (5%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G FG V+  +     D  +    A+K+++K+     + ++ +  E +IL K+ HP I
Sbjct: 1   LGEGGFGTVYLAR-----DKKTGKKVAIKIIKKED--SSSLLEELLREIEILKKLNHPNI 53

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGI 236
           V+L   F+  + LYL++++  GG L   L    G   ED+      +I+  + +LH  GI
Sbjct: 54  VKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGI 113

Query: 237 VHRDLKPENILMDSD 251
           +HRDLKPENIL+DSD
Sbjct: 114 IHRDLKPENILLDSD 128

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score =  120 bits (303), Expect = 1e-32
 Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 8/141 (5%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH-- 174
           ++G+G FG+V+  +K      D+  +YAMK + K  I  K        ER +L+ V+   
Sbjct: 1   IIGRGGFGEVYGCRK-----ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 55

Query: 175 -PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
            PFIV + Y+F T  KL  ILD +NGG L +HL + G+F E + RFY AEI+  + H+H 
Sbjct: 56  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHN 115

Query: 234 CGIVHRDLKPENILMDSDGHV 254
             +V+RDLKP NIL+D  GHV
Sbjct: 116 RFVVYRDLKPANILLDEHGHV 136

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score =  121 bits (305), Expect = 1e-32
 Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 5/145 (3%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            DFE  +++  GA+G V+ V+ K     ++   +AMK + K  +I +N +  +  ERDIL
Sbjct: 1   EDFETIKLISNGAYGAVYLVRHK-----ETRQRFAMKKINKQNLILRNQIQQVFVERDIL 55

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           T   +PF+V +  SF+T+  L ++++++ GG     L   G    D AR Y AE V A+ 
Sbjct: 56  TFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALE 115

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           +LH  GIVHRDLKP+N+L+ S GH+
Sbjct: 116 YLHNYGIVHRDLKPDNLLITSMGHI 140

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score =  120 bits (303), Expect = 1e-32
 Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 11/147 (7%)

Query: 112 FEIFRVVGQGAFGKVF--QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           F  +RV+G+G FG+V   QV+  G        +YA K + K  I K+        E+ IL
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATG-------KMYACKRLEKKRIKKRKGESMALNEKQIL 54

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSA 227
            KV   F+V L Y+++T+  L L+L  +NGG L FH+Y  G   F E++A FY AEI+  
Sbjct: 55  EKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG 114

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           +  LH+   V+RDLKPENIL+D  GH+
Sbjct: 115 LEDLHRENTVYRDLKPENILLDDYGHI 141

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  119 bits (300), Expect = 3e-32
 Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 8/141 (5%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
            ++G+G+FG V+      +D  D+  + A+K +      ++  ++ ++ E  IL+ + HP
Sbjct: 6   ELLGRGSFGSVYL----ALDK-DTGELMAVKSVELSGDSEE-ELEALEREIRILSSLQHP 59

Query: 176 FIVQLRYSFQTRSK--LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
            IV+   S +   K  L + L++++GG L   L + G   E   R YT +I+  +++LH 
Sbjct: 60  NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119

Query: 234 CGIVHRDLKPENILMDSDGHV 254
            GIVHRD+K  NIL+DSDG V
Sbjct: 120 NGIVHRDIKGANILVDSDGVV 140

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score =  120 bits (303), Expect = 3e-32
 Identities = 62/148 (41%), Positives = 94/148 (63%), Gaps = 6/148 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI +V+G+GAFG+V  VK K     ++D ++AMK++ K  ++K+      + ERD+L 
Sbjct: 2   DFEILKVIGRGAFGEVAVVKLK-----NADKVFAMKILNKWEMLKRAETACFREERDVLV 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVS 229
              + +I  L Y+FQ  + LYL++D+  GG L   L + +    ED ARFY AE+V A+ 
Sbjct: 57  NGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAID 116

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +H+   VHRD+KP+NILMD +GH+  A
Sbjct: 117 SVHQLHYVHRDIKPDNILMDMNGHIRLA 144

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  119 bits (300), Expect = 9e-32
 Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 9/149 (6%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL-- 169
           F    V+G+G FGKV   + K      +  +YA+K ++K  II ++ V+ +  E+ I   
Sbjct: 1   FRCLAVLGRGHFGKVLLAEYKK-----TGELYAIKALKKGDIIARDEVESLMCEKRIFET 55

Query: 170 -TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
                HPF+V L   FQT   +  ++++  GG L  H++   +F E +A FY A +V  +
Sbjct: 56  ANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGL 114

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +LH+  IV+RDLK +N+L+D++G V  A
Sbjct: 115 QYLHENKIVYRDLKLDNLLLDTEGFVKIA 143

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score =  116 bits (292), Expect = 5e-31
 Identities = 62/147 (42%), Positives = 85/147 (57%), Gaps = 11/147 (7%)

Query: 112 FEIFRVVGQGAFGKVF--QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           F  +RV+G+G FG+V   QV+  G        +YA K + K  I K+        E+ IL
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATG-------KMYACKKLEKKRIKKRKGESMALNEKQIL 54

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSA 227
            KV   F+V L Y+++T+  L L+L  +NGG L FH+Y  G   F E +A FY AEI   
Sbjct: 55  EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           +  LH+  IV+RDLKPENIL+D  GH+
Sbjct: 115 LEDLHQERIVYRDLKPENILLDDHGHI 141

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score =  116 bits (292), Expect = 1e-30
 Identities = 60/148 (40%), Positives = 92/148 (62%), Gaps = 6/148 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI +V+G+GAFG+V  VK K      ++ IYAMK++ K  ++K+      + ER++L 
Sbjct: 2   DFEIIKVIGRGAFGEVAVVKMK-----HTERIYAMKILNKWEMLKRAETACFREERNVLV 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVS 229
                +I  L Y+FQ  + LYL++D+  GG L   L + +    ED ARFY AE+V A+ 
Sbjct: 57  NGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIH 116

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +H+   VHRD+KP+N+L+D +GH+  A
Sbjct: 117 SIHQLHYVHRDIKPDNVLLDMNGHIRLA 144

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score =  116 bits (291), Expect = 2e-30
 Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 4/161 (2%)

Query: 94  ENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI 153
           ++D+  E + + K+   DF   R +G G+FG+V     K   + D   + A+K   K  I
Sbjct: 14  DSDSTKEPKRKNKMKYEDFNFIRTLGTGSFGRVILATYK---NEDFPPV-AIKRFEKSKI 69

Query: 154 IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFR 213
           IK+  VD++ +ER IL  + HPF V L  SF+  S LYL+L+F+ GG  F  L R   F 
Sbjct: 70  IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFP 129

Query: 214 EDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            D   FY A+IV    +L    IV+RDLKPEN+L+D DG +
Sbjct: 130 NDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFI 170

Length = 340

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score =  114 bits (286), Expect = 4e-30
 Identities = 56/141 (39%), Positives = 87/141 (61%), Gaps = 9/141 (6%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G FG+V   + +      +  +YA K + K  + K+   +    E+ IL KV   FI
Sbjct: 1   LGKGGFGEVSACQMRA-----TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFI 55

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLY----RQGIFREDQARFYTAEIVSAVSHLHK 233
           V L Y+FQT++ L L++  +NGG L +H+Y        F E +A FYTA+I+S + HLH+
Sbjct: 56  VSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ 115

Query: 234 CGIVHRDLKPENILMDSDGHV 254
             I++RDLKPEN+L+D+DG+V
Sbjct: 116 RRIIYRDLKPENVLLDNDGNV 136

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score =  113 bits (283), Expect = 9e-30
 Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 8/141 (5%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH-- 174
           ++G+G FG+V+  +K      D+  +YAMK + K  I  K        ER +L+ V+   
Sbjct: 1   IIGRGGFGEVYGCRK-----ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 55

Query: 175 -PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
            PFIV + Y+F T  KL  ILD +NGG L +HL + G+F E + RFY  EI+  + H+H 
Sbjct: 56  CPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHN 115

Query: 234 CGIVHRDLKPENILMDSDGHV 254
             +V+RDLKP NIL+D  GHV
Sbjct: 116 RFVVYRDLKPANILLDEHGHV 136

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score =  114 bits (287), Expect = 1e-29
 Identities = 58/147 (39%), Positives = 93/147 (63%), Gaps = 6/147 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+E+ +V+G+GAFG+V  V+ K      +  +YAMK++ K  +IK++   +   ERDI+ 
Sbjct: 44  DYEVVKVIGRGAFGEVQLVRHKS-----TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 98

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
               P++VQL Y+FQ    LY++++++ GG L  +L       E  ARFYTAE+V A+  
Sbjct: 99  FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDA 157

Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
           +H  G +HRD+KP+N+L+D  GH+  A
Sbjct: 158 IHSMGFIHRDVKPDNMLLDKSGHLKLA 184

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score =  112 bits (282), Expect = 3e-29
 Identities = 54/143 (37%), Positives = 91/143 (63%), Gaps = 6/143 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-TH 174
           +++G+G+FGKVF  + KG     ++  +A+K ++KD ++  + V+    E+ +L+    H
Sbjct: 1   KMLGKGSFGKVFLAELKG-----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+  L  +FQT+  L+ +++++NGG L FH+     F   +A FY AEI+  +  LH  
Sbjct: 56  PFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK 115

Query: 235 GIVHRDLKPENILMDSDGHVMAA 257
           GIV+RDLK +NIL+D+DGH+  A
Sbjct: 116 GIVYRDLKLDNILLDTDGHIKIA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score =  112 bits (282), Expect = 5e-29
 Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 6/147 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ +V+G+GAFG+V  V+ K      S  +YAMK++ K  +IK++   +   ERDI+ 
Sbjct: 44  DYDVVKVIGRGAFGEVQLVRHKS-----SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 98

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
               P++VQL  +FQ    LY++++++ GG L  +L       E  A+FYTAE+V A+  
Sbjct: 99  FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVLALDA 157

Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
           +H  G++HRD+KP+N+L+D  GH+  A
Sbjct: 158 IHSMGLIHRDVKPDNMLLDKHGHLKLA 184

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score =  111 bits (278), Expect = 6e-29
 Identities = 60/147 (40%), Positives = 84/147 (57%), Gaps = 11/147 (7%)

Query: 112 FEIFRVVGQGAFGKVF--QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           F  +RV+G+G FG+V   QV+  G        +YA K + K  I K+        E+ IL
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATG-------KMYACKKLEKKRIKKRKGEAMALNEKRIL 54

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSA 227
            KV   F+V L Y+++T+  L L+L  +NGG L FH+Y  G   F E +A FY AE+   
Sbjct: 55  EKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG 114

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           +  L +  IV+RDLKPENIL+D  GH+
Sbjct: 115 LEDLQRERIVYRDLKPENILLDDRGHI 141

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score =  107 bits (269), Expect = 2e-27
 Identities = 53/143 (37%), Positives = 89/143 (62%), Gaps = 6/143 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-TH 174
           +V+G+G+FGKV   + KG  +      +A+K ++KD ++  + V+    E+ +L     +
Sbjct: 1   KVLGKGSFGKVLLAELKGKGE-----YFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           PF+  L  +FQT+  L+ +++F+NGG L FH+  +G F   +A FY AEIV  +  LH  
Sbjct: 56  PFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK 115

Query: 235 GIVHRDLKPENILMDSDGHVMAA 257
           GI++RDLK +N+++D DGH+  A
Sbjct: 116 GIIYRDLKLDNVMLDRDGHIKIA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score =  105 bits (264), Expect = 5e-27
 Identities = 54/140 (38%), Positives = 82/140 (58%), Gaps = 11/140 (7%)

Query: 118 VGQGAFGKV--FQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           +G+G FG+V   QVK  G        +YA K + K  + KK+       E++IL KV  P
Sbjct: 1   LGKGGFGEVCAVQVKNTG-------KMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSP 53

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR--FYTAEIVSAVSHLHK 233
           FIV L Y+F++++ L L++  +NGG L +H+Y  G    +  R   Y+A+I   + HLH 
Sbjct: 54  FIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS 113

Query: 234 CGIVHRDLKPENILMDSDGH 253
             IV+RD+KPEN+L+D  G+
Sbjct: 114 MDIVYRDMKPENVLLDDQGN 133

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  104 bits (263), Expect = 5e-27
 Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 21/151 (13%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            FEI   +G+G FG+V++ + K        G   A+KV++ ++  KK  +     E  IL
Sbjct: 1   LFEILEKIGKGGFGEVYKARHK------RTGKEVAIKVIKLESKEKKEKI---INEIQIL 51

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ------GIFREDQARFYTAE 223
            K  HP IV+   S+  + +L+++++F +GG L     +           E Q  +   E
Sbjct: 52  KKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL-----KDLLKSTNQTLTESQIAYVCKE 106

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++  + +LH  GI+HRD+K  NIL+ SDG V
Sbjct: 107 LLKGLEYLHSNGIIHRDIKAANILLTSDGEV 137

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  106 bits (264), Expect = 2e-26
 Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 12/148 (8%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            + I R +G+G+FG+V+  + +         + A+KV+ K    K   V+    E  IL 
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRK--------LVALKVLAKKLESKSKEVERFLREIQILA 52

Query: 171 KVTHP-FIVQLRYSFQTRSKLYLILDFINGG---HLFFHLYRQGIFREDQARFYTAEIVS 226
            + HP  IV+L   FQ    LYL++++++GG    L   + R+G   E +A F  A+I+S
Sbjct: 53  SLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILS 112

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHV 254
           A+ +LH  GI+HRD+KPENIL+D DG V
Sbjct: 113 ALEYLHSKGIIHRDIKPENILLDRDGRV 140

Length = 384

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 44/144 (30%), Positives = 80/144 (55%), Gaps = 6/144 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           ++++  ++G+GAFG V+    KG++  ++    A+K +  + I ++     M  E D+L 
Sbjct: 1   NYQLGDLIGRGAFGVVY----KGLN-LETGDFVAIKQISLEKIKEEALKSIM-QEIDLLK 54

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP IV+   S +T   LY+IL++   G L   + + G F E     Y  +++  +++
Sbjct: 55  NLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAY 114

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH+ G++HRD+K  NIL   DG V
Sbjct: 115 LHEQGVIHRDIKAANILTTKDGVV 138

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 89.7 bits (223), Expect = 5e-21
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 26/172 (15%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--L 169
           +E+  VVG+GA+G V + + K    G+   I   K    D  +KK       A R++  L
Sbjct: 3   YEVLGVVGEGAYGVVLKCRNK--ATGEIVAIKKFKESEDDEDVKK------TALREVKVL 54

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL---YRQGIFREDQARFYTAEIVS 226
            ++ H  IV L+ +F+ + +LYL+ +++        L      G+   D  R Y  +++ 
Sbjct: 55  RQLRHENIVNLKEAFRRKGRLYLVFEYV--ERTLLELLEASPGGL-PPDAVRSYIWQLLQ 111

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGG 278
           A+++ H   I+HRD+KPENIL+   G +          +LC F F   L   
Sbjct: 112 AIAYCHSHNIIHRDIKPENILVSESGVL----------KLCDFGFARALRAR 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 89.0 bits (221), Expect = 5e-21
 Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 7/144 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR--KDTIIKKNHVDYMKAERDILTKVT 173
            ++G G+FG V++    G++  D    +A+K +    D    +  V  ++ E  +L+K+ 
Sbjct: 6   ELLGSGSFGSVYE----GLN-LDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60

Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           HP IVQ   + +    LY+ L+ + GG L   L + G F E   R YT +I+  + +LH 
Sbjct: 61  HPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHD 120

Query: 234 CGIVHRDLKPENILMDSDGHVMAA 257
              VHRD+K  NIL+D++G V  A
Sbjct: 121 RNTVHRDIKGANILVDTNGVVKLA 144

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 86.2 bits (214), Expect = 6e-20
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 8/136 (5%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G G FGKV+        + D+  + A+K +R      K     +  E  +L  + HP +
Sbjct: 8   IGGGTFGKVYTAV-----NLDTGELMAVKEIRIQDNDPKTI-KEIADEMKVLELLKHPNL 61

Query: 178 VQLRYSFQT-RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGI 236
           V+  Y  +  R K+Y+ +++ +GG L   L    I  E   R YT +++  +++LH  GI
Sbjct: 62  VKY-YGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI 120

Query: 237 VHRDLKPENILMDSDG 252
           VHRD+KP NI +D +G
Sbjct: 121 VHRDIKPANIFLDHNG 136

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 85.0 bits (211), Expect = 2e-19
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 8/145 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D E  +V+GQG+ G V++V+ K    G    IYA+K +  D   +      +  E   L 
Sbjct: 2   DLERVKVLGQGSSGVVYKVRHKP--TGK---IYALKKIHVDGDEEFRKQ--LLRELKTLR 54

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
               P++V+   +F    ++ ++L++++GG L   L + G   E    +   +I+  + +
Sbjct: 55  SCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDY 114

Query: 231 LHKC-GIVHRDLKPENILMDSDGHV 254
           LH    I+HRD+KP N+L++S G V
Sbjct: 115 LHTKRHIIHRDIKPSNLLINSKGEV 139

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 84.6 bits (209), Expect = 2e-19
 Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 11/147 (7%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH-VDYMKAERDIL 169
            + + RVVG+G+FG+   V+       +SD  YAMK +R   + K +  V+  + E  +L
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHV-----NSDQKYAMKEIR---LPKSSSAVEDSRKEAVLL 52

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF--FHLYRQGIFREDQARFYTAEIVSA 227
            K+ HP IV  + SF+    LY+++++ +GG L     L R  +F ED    +  ++   
Sbjct: 53  AKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG 112

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           V H+H+  ++HRD+K +NI +  +G V
Sbjct: 113 VQHIHEKRVLHRDIKSKNIFLTQNGKV 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 84.5 bits (209), Expect = 3e-19
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 8/139 (5%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G+FGK   VK K  +DG    I  + + +    +     +  + E  +L+ + HP I
Sbjct: 8   IGEGSFGKAILVKSK--EDGKQYVIKEINISK----MSPKEREESRKEVAVLSNMKHPNI 61

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GI-FREDQARFYTAEIVSAVSHLHKCG 235
           VQ + SF+    LY+++D+  GG L+  +  Q G+ F EDQ   +  +I  A+ H+H   
Sbjct: 62  VQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK 121

Query: 236 IVHRDLKPENILMDSDGHV 254
           I+HRD+K +NI +  DG +
Sbjct: 122 ILHRDIKSQNIFLTKDGTI 140

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 84.7 bits (210), Expect = 3e-19
 Identities = 38/143 (26%), Positives = 75/143 (52%), Gaps = 10/143 (6%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--L 169
           ++    +G+G +G V++ +     D  +  I A+K ++      ++      A R+I  L
Sbjct: 1   YQKLGKIGEGTYGVVYKAR-----DKLTGEIVAIKKIKLRF---ESEGIPKTALREIKLL 52

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
            ++ HP I++L   F+ +  LYL+ +F++         RQ    E   + Y  +++  ++
Sbjct: 53  KELNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLA 112

Query: 230 HLHKCGIVHRDLKPENILMDSDG 252
             H  GI+HRDLKPEN+L++++G
Sbjct: 113 FCHSHGILHRDLKPENLLINTEG 135

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 84.5 bits (210), Expect = 4e-19
 Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 38/160 (23%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD---- 167
           +E    +G+G +G+V++ + K   +     + A+K +R +             E++    
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGE-----LVALKKIRMEN------------EKEGFPI 43

Query: 168 -------ILTKVTHPFIVQLR--YSFQTRSKLYLILDFI----NGGHLFFHLYRQGIFRE 214
                  +L K+ HP IV+L+   + + +  +Y++ +++     G         +  F E
Sbjct: 44  TAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTG----LLDSPEVKFTE 99

Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            Q + Y  +++  + +LH  GI+HRD+K  NIL+++DG +
Sbjct: 100 SQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVL 139

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 84.2 bits (209), Expect = 5e-19
 Identities = 42/164 (25%), Positives = 83/164 (50%), Gaps = 14/164 (8%)

Query: 96  DAELEAESERKIGPGD----FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD 151
           + EL+A  +  +  GD    ++    +G+GA G+V++   +    G      A+K MR  
Sbjct: 1   EEELKAALKDIVSEGDPRELYKNLEKIGEGASGEVYKATDRA--TGKE---VAIKKMR-- 53

Query: 152 TIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QG 210
             ++K + + +  E  I+    HP IV    S+    +L++++++++GG L   + +   
Sbjct: 54  --LRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFV 111

Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              E Q  +   E++  + +LH   ++HRD+K +NIL+  DG V
Sbjct: 112 RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSV 155

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 83.7 bits (207), Expect = 6e-19
 Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 3/146 (2%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           P ++   +++GQGAFG+V+      VD G    +  +         K   V+ ++ E  +
Sbjct: 1   PTNWRRGKLLGQGAFGRVYLCYD--VDTGRELAVKQVPFDPDSPETK-KEVNALECEIQL 57

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           L  + H  IVQ     +    L + ++++ GG +   L   G   E   R YT +I+  V
Sbjct: 58  LKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGV 117

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
            +LH   IVHRD+K  NIL DS G+V
Sbjct: 118 EYLHSNMIVHRDIKGANILRDSAGNV 143

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 81.9 bits (202), Expect = 2e-18
 Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 8/145 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +EI + +G+G+FGK++  K K     DS+     ++      +K+      K E  +L K
Sbjct: 2   YEIIKKIGEGSFGKIYLAKAKS----DSEHCVIKEIDLTKMPVKEKEAS--KKEVILLAK 55

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVS 229
           + HP IV    SFQ   +L++++++ +GG L   + RQ   +F EDQ   +  +I   + 
Sbjct: 56  MKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLK 115

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           H+H   I+HRD+K +NI +  +G V
Sbjct: 116 HIHDRKILHRDIKSQNIFLSKNGMV 140

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 81.8 bits (203), Expect = 4e-18
 Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 17/149 (11%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--L 169
           +++ + +G G FG V+  + K     ++  + A+K M+K      +  + M   R++  L
Sbjct: 1   YKVIKQLGDGTFGSVYLARNK-----ETGELVAIKKMKKKF---YSWEECMN-LREVKSL 51

Query: 170 TKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ---GIFREDQARFYTAEIV 225
            K+  HP IV+L+  F+   +LY + +++ G    + L +      F E   R    +I+
Sbjct: 52  RKLNEHPNIVKLKEVFRENDELYFVFEYMEGN--LYQLMKDRKGKPFSESVIRSIIYQIL 109

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             ++H+HK G  HRDLKPEN+L+     V
Sbjct: 110 QGLAHIHKHGFFHRDLKPENLLVSGPEVV 138

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 80.2 bits (198), Expect = 9e-18
 Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 21/167 (12%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMK---VMRKDTIIKKNHVDYMKAERD 167
           DFEI   +G+G+FG VF+V +K   D     +YAMK   + + +   ++  +D    E  
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRK--ADKR---VYAMKQIDLSKMNRREREEAID----EAR 51

Query: 168 ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG--HLFFHLYRQGIFREDQA-RFYTAEI 224
           +L K+   +I++   SF  + KL +++++   G  H    + R     EDQ  RF+  +I
Sbjct: 52  VLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFI-QI 110

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVM-----AAHSLNSHNQL 266
           +  ++HLH   I+HRD+K  N+ +D+  +V       A  L+ +   
Sbjct: 111 LLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 80.8 bits (199), Expect = 1e-17
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 104 ERKIGPGD-FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
            R + P + +EI   +G GAFGKV++ K K     ++  + A KV+  +T  ++   DYM
Sbjct: 5   RRDLDPNEVWEIIGELGDGAFGKVYKAKNK-----ETGALAAAKVI--ETKSEEELEDYM 57

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH---LFFHLYRQGIFREDQARF 219
             E +IL    HP+IV+L  +F    KL+++++F  GG    +   L R     E Q + 
Sbjct: 58  -VEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQV 114

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
              +++ A+ +LH   I+HRDLK  N+L+  DG +  A
Sbjct: 115 ICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLA 152

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 80.4 bits (199), Expect = 1e-17
 Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 8/143 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F +   +G+G+FG+V+    K +D   +  + A+KV+  +    ++ ++ ++ E   L++
Sbjct: 3   FTLLECIGKGSFGEVY----KAIDKRTNQ-VVAIKVIDLEE--AEDEIEDIQQEIQFLSQ 55

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
              P+I +   SF   SKL++I+++  GG     L + G   E    F   E++  + +L
Sbjct: 56  CRSPYITKYYGSFLKGSKLWIIMEYCGGGSCL-DLLKPGKLDETYIAFILREVLLGLEYL 114

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H+ G +HRD+K  NIL+  +G V
Sbjct: 115 HEEGKIHRDIKAANILLSEEGDV 137

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 80.2 bits (199), Expect = 1e-17
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 32/154 (20%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD--------TIIKKNHVDYMK 163
           +E    +G+G +G V++ + K      +  I A+K +R D        T ++        
Sbjct: 1   YEKLEKLGEGTYGVVYKARDK-----KTGEIVALKKIRLDNEEEGIPSTALR-------- 47

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-----RQGIFREDQAR 218
            E  +L ++ HP IV+L     T  KLYL+ ++ +       L      R G    +  +
Sbjct: 48  -EISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-----MDLKKYLDKRPGPLSPNLIK 101

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
               +++  +++ H   I+HRDLKP+NIL++ DG
Sbjct: 102 SIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG 135

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 77.5 bits (191), Expect = 8e-17
 Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 8/145 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +   RV+G+GAFG+    ++      + D +   K +    + +K   D +  E  IL+ 
Sbjct: 2   YIPIRVLGKGAFGEATLYRRT-----EDDSLVVWKEVNLTRLSEKERRDALN-EIVILSL 55

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVS 229
           + HP I+     F   + L + +++ NGG L+  + RQ   +F E+   +Y  +IVSAVS
Sbjct: 56  LQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVS 115

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           ++HK GI+HRD+K  NI +   G +
Sbjct: 116 YIHKAGILHRDIKTLNIFLTKAGLI 140

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 77.9 bits (192), Expect = 1e-16
 Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 10/151 (6%)

Query: 109 PGDF-EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD 167
           P D  EI   +G GAFGKV++ + K     ++    A K++      ++   D+M  E D
Sbjct: 3   PNDIWEIIGELGDGAFGKVYKAQHK-----ETGLFAAAKII--QIESEEELEDFM-VEID 54

Query: 168 ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL-FFHLYRQGIFREDQARFYTAEIVS 226
           IL++  HP IV L  ++   +KL+++++F +GG L    L  +    E Q R+   +++ 
Sbjct: 55  ILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLE 114

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           A++ LH   ++HRDLK  NIL+  DG V  A
Sbjct: 115 ALNFLHSHKVIHRDLKAGNILLTLDGDVKLA 145

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 77.8 bits (191), Expect = 1e-16
 Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 14/155 (9%)

Query: 107 IGPGDF-EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           + P +F EI   +G GAFGKV++ + K     ++  + A KV+  DT  ++   DYM  E
Sbjct: 1   LNPEEFWEIIGELGDGAFGKVYKAQNK-----ETGVLAAAKVI--DTKSEEELEDYM-VE 52

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL---FFHLYRQGIFREDQARFYTA 222
            DIL    HP IV+L  +F   + L+++++F  GG +      L R     E Q R    
Sbjct: 53  IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTEPQIRVVCK 110

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + + A+++LH+  I+HRDLK  NIL   DG +  A
Sbjct: 111 QTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLA 145

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 77.5 bits (191), Expect = 1e-16
 Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 17/156 (10%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMK-------VMRKDTIIKKNHVDYMKA 164
           + +   +G GAFG V++V+KK     +   + A+K          KD   +   +  + +
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKN----NGQNLLALKEINVHNPAFGKDKRERDKSIGDIVS 57

Query: 165 ERDILTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY----RQGIFREDQARF 219
           E  I+ + + HP IV+   +F    +LY+++D I G  L  H      ++  F E++   
Sbjct: 58  EVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWN 117

Query: 220 YTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHV 254
              ++V A+ +LHK   IVHRDL P NI++  D  V
Sbjct: 118 IFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKV 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 17/151 (11%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR---KDTIIKKNHVDYMKAER 166
            D E    +G G  G V +V  +      +  I A+K +R    + I K+     +  E 
Sbjct: 1   DDLEYLGELGAGNSGVVSKVLHRP-----TGKIMAVKTIRLEINEAIQKQ-----ILREL 50

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEI 224
           DIL K   P+IV    +F     + + +++++GG L       +  I  E         +
Sbjct: 51  DILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRI-PERILGKIAVAV 109

Query: 225 VSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
           +  +++LH K  I+HRD+KP NIL++S G +
Sbjct: 110 LKGLTYLHEKHKIIHRDVKPSNILVNSRGQI 140

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 76.8 bits (189), Expect = 2e-16
 Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR----KDTIIKKNHVDYMKAERDILTKV 172
           ++G+G +G+V+      V  G+   +  +++      +    +K+ V  +++E + L  +
Sbjct: 8   LIGKGTYGRVYLALN--VTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65

Query: 173 THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH 232
            H  IVQ      T   L + L+++ GG +   L   G F E   RF+T +++  +++LH
Sbjct: 66  DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLH 125

Query: 233 KCGIVHRDLKPENILMDSDG 252
             GI+HRDLK +N+L+D+DG
Sbjct: 126 SKGILHRDLKADNLLVDADG 145

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 12/149 (8%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           DF++ + +G+G++G V++VK+       SD   YA+K +   ++ +K   D +   R IL
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKR------LSDNQFYALKEVDLGSMSQKEREDAVNEIR-IL 53

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAEIV 225
             V HP I+  + +F   +KL +++++   G L   + ++     +  E +      +++
Sbjct: 54  ASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLL 113

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +  LH+  I+HRDLK  NIL+ ++  V
Sbjct: 114 RGLQALHEQKILHRDLKSANILLVANDLV 142

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 74.9 bits (184), Expect = 9e-16
 Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 24/148 (16%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM-KAER---- 166
           +E  RVVG+GAFG V   ++K   D            +K  IIK+  V+ M K ER    
Sbjct: 2   YEKIRVVGRGAFGIVHLCRRK--AD------------QKLVIIKQIPVEQMTKDERLAAQ 47

Query: 167 ---DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYT 221
               +L  ++HP I++   +F     L +++++  GG L  ++ ++   +  ED    + 
Sbjct: 48  NECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFF 107

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMD 249
            +I+ A+ H+H   I+HRDLK +NIL+D
Sbjct: 108 VQILLALHHVHTKLILHRDLKTQNILLD 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 30/145 (20%), Positives = 71/145 (48%), Gaps = 11/145 (7%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            F+I   +G+G++G V++   K     ++  + A+KV+  +  +++     +  E  IL 
Sbjct: 4   VFDILEKLGEGSYGSVYKAIHK-----ETGQVVAIKVVPVEEDLQE-----IIKEISILK 53

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEIVSAVS 229
           +   P+IV+   S+   + L++++++   G +   +        E++      + +  + 
Sbjct: 54  QCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLE 113

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           +LH    +HRD+K  NIL++ +G  
Sbjct: 114 YLHSNKKIHRDIKAGNILLNEEGQA 138

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 42/157 (26%), Positives = 83/157 (52%), Gaps = 20/157 (12%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
            G FE+  V+G+G +GKV++ + K      +  + A+K+M     I ++  + +K E +I
Sbjct: 5   TGIFELVEVIGEGTYGKVYKARHK-----KTGQLVAIKIMD----IIEDEEEEIKEEYNI 55

Query: 169 LTKVT-HPFIVQLRYSFQTRS------KLYLILDFINGG---HLFFHLYRQG-IFREDQA 217
           L K + HP I     +F  ++      +L+L+++   GG    L   L ++G   +E+  
Sbjct: 56  LRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWI 115

Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            +   E +  +++LH+  ++HRD+K +NIL+  +  V
Sbjct: 116 AYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEV 152

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 73.5 bits (181), Expect = 3e-15
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 26/155 (16%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-IKKNHVDYMKAERDIL 169
           D+E+  V+G GA   V+                A+ +   + + IK+  ++  +   D L
Sbjct: 2   DYELIEVIGVGATAVVYA---------------AICLPNNEKVAIKRIDLEKCQTSVDEL 46

Query: 170 TK-------VTHPFIVQLRYSFQTRSKLYLILDFINGG---HLFFHLYRQGIFREDQARF 219
            K         HP +V+   SF    +L+L++ +++GG    +    Y +G   E     
Sbjct: 47  RKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIAT 106

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              E++  + +LH  G +HRD+K  NIL+  DG V
Sbjct: 107 VLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSV 141

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 73.5 bits (181), Expect = 3e-15
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 22/152 (14%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMK---VMRKDTIIKKNHVDYMKAERD 167
            ++I   +G+GA G VF+ K +      +    A+K   + R +  I    +  +KA   
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRE-----TGETVALKKVALRRLEGGIPNQALREIKA--- 52

Query: 168 ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-----RQGIFREDQARFYTA 222
            L    HP++V+L   F   S   L+++++        L       +    E Q + Y  
Sbjct: 53  -LQACQHPYVVKLLDVFPHGSGFVLVMEYMPSD-----LSEVLRDEERPLPEAQVKSYMR 106

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            ++  V+++H  GI+HRDLKP N+L+ +DG +
Sbjct: 107 MLLKGVAYMHANGIMHRDLKPANLLISADGVL 138

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 41/146 (28%), Positives = 79/146 (54%), Gaps = 11/146 (7%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+E+ + +G G +G V++ +     D  +  + A+KV++ +     +  + ++ E  +L 
Sbjct: 4   DYELIQRIGSGTYGDVYKAR-----DIATGELVAIKVIKLE---PGDDFEIIQQEISMLK 55

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEIVSAV 228
           +  HP IV    S+  R KL++++++  GG L   + + R G   E Q  +   E +  +
Sbjct: 56  ECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGL 114

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
           ++LH+ G +HRD+K  NIL+  DG V
Sbjct: 115 AYLHETGKIHRDIKGANILLTEDGDV 140

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 72.6 bits (178), Expect = 4e-15
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 145 MKVMRKDTIIKKNHVDYMKAERDILTKVTH--PFIVQLRYSFQTRSKLYLILDFINGGHL 202
           M    + T I K      +  R+ LT + H  P +V L     +   ++L+L    GG L
Sbjct: 13  MDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKL 72

Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           + H+ +     E+  + + AE+V A+  LH+ GIV RDL P NIL+D  GH+
Sbjct: 73  WSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHI 124

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 19/156 (12%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           D+E+   +G+G+FG V +V++K      SDG I   K +    + +K     + +E +IL
Sbjct: 1   DYEVLETIGKGSFGTVRKVRRK------SDGKILVWKEIDYGNMTEKEK-QQLVSEVNIL 53

Query: 170 TKVTHPFIVQL--RYSFQTRSKLYLILDFINGGHL--FFHLYRQ--GIFREDQARFYTAE 223
            ++ HP IV+   R   ++   LY+++++  GG L       ++      E+       +
Sbjct: 54  RELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQ 113

Query: 224 IVSAVSHLHKCG-----IVHRDLKPENILMDSDGHV 254
           ++ A+   H        ++HRDLKP NI +D++ +V
Sbjct: 114 LLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNV 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 71.0 bits (175), Expect = 2e-14
 Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 17/150 (11%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           + +G+GAFG+V++ K KG D   ++   A+K +++D   ++   D++K E  ++ K+ HP
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEV--AVKTLKEDASEEE-RKDFLK-EARVMKKLGHP 56

Query: 176 FIVQLR-YSFQTRSKLYLILDFINGGHL----------FFHLYRQGIFREDQARFYTAEI 224
            +V+L          LYL+L+++ GG L          F    +  +  +D   F   +I
Sbjct: 57  NVVRLLGVCT-EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSF-AIQI 114

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              + +L     VHRDL   N L+  D  V
Sbjct: 115 AKGMEYLASKKFVHRDLAARNCLVGEDLVV 144

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 70.2 bits (173), Expect = 3e-14
 Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           + +G+GAFG+V++   KG  +G  +   A+K +++    ++   ++++ E  I+ K++HP
Sbjct: 5   KKLGEGAFGEVYKGTLKGDGEGT-ETKVAVKTLKEGAS-EEEREEFLE-EASIMKKLSHP 61

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVSAVSHLHKC 234
            IV+L         LY++ +++ GG L   L + G             +I   + +L   
Sbjct: 62  NIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESK 121

Query: 235 GIVHRDLKPENILMDSDGHV 254
             VHRDL   N L+  +  V
Sbjct: 122 NFVHRDLAARNCLVTENLVV 141

Length = 258

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 70.6 bits (173), Expect = 6e-14
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 27/222 (12%)

Query: 48  NQSPASTSASLGDPQVIHNRSH-----SFVGPSPRYALSSSLPLQIQELEHENDAELEAE 102
            Q P              +R       +   P    +L+  LPL        + +   A 
Sbjct: 4   IQPPPGVPLPSTARHTTKSRPRRRPDLTLPLPQRDPSLAVPLPLPPPSSSSSSSSSSSAS 63

Query: 103 SERKIGPGDF-EIFRV--VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV 159
                      E+ RV  +G GA G V++V  +      +  +YA+KV      I  NH 
Sbjct: 64  GSAPSAAKSLSELERVNRIGSGAGGTVYKVIHRP-----TGRLYALKV------IYGNHE 112

Query: 160 DYMK----AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRED 215
           D ++     E +IL  V HP +V+    F    ++ ++L+F++GG L         F  D
Sbjct: 113 DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLAD 172

Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            AR    +I+S +++LH+  IVHRD+KP N+L++S  +V  A
Sbjct: 173 VAR----QILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIA 210

Length = 353

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 69.5 bits (171), Expect = 7e-14
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 11/144 (7%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIY---AMKVMRKDTIIKKNHVDYMKAERDILTKV 172
           + +G+GAFG+V+    KG   G  DG     A+K +++D   +   ++    E  I+ K+
Sbjct: 5   KKLGEGAFGEVY----KGTLKGKGDGKEVEVAVKTLKEDASEQ--QIEEFLREARIMRKL 58

Query: 173 THPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEIVSAVSH 230
            HP IV+L         L ++++++ GG L  +    R           +  +I   + +
Sbjct: 59  DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEY 118

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           L     +HRDL   N L+  +  V
Sbjct: 119 LESKNFIHRDLAARNCLVGENLVV 142

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 69.3 bits (169), Expect = 8e-14
 Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 8/147 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE+ + +G G +G V+  K + V+ G+   + A+KV++ +          ++ E  ++ 
Sbjct: 10  DFELIQRIGSGTYGDVY--KARNVNTGE---LAAIKVIKLE---PGEDFAVVQQEIIMMK 61

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
              H  IV    S+  R KL++ ++F  GG L    +  G   E Q  + + E +  + +
Sbjct: 62  DCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYY 121

Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
           LH  G +HRD+K  NIL+  +GHV  A
Sbjct: 122 LHSKGKMHRDIKGANILLTDNGHVKLA 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 69.1 bits (170), Expect = 1e-13
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 21/152 (13%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--L 169
           +E  + +G+G +  V++ +     D ++  I A+K ++     +        A R+I  L
Sbjct: 2   YEKGKKLGEGTYAVVYKAR-----DKETGRIVAIKKIKLGERKEAKDGINFTALREIKLL 56

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS--- 226
            ++ HP I+ L   F  +S + L+ +F+    L      + + ++       A+I S   
Sbjct: 57  QELKHPNIIGLLDVFGHKSNINLVFEFM-ETDL------EKVIKDKSIVLTPADIKSYML 109

Query: 227 ----AVSHLHKCGIVHRDLKPENILMDSDGHV 254
                + +LH   I+HRDLKP N+L+ SDG +
Sbjct: 110 MTLRGLEYLHSNWILHRDLKPNNLLIASDGVL 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 68.9 bits (168), Expect = 1e-13
 Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           FE+  VVG+GA+G V + + K     ++  I A+K   KD+   +   +    E  +L  
Sbjct: 3   FEVLGVVGEGAYGVVLKCRHK-----ETKEIVAIKKF-KDSEENEEVKETTLRELKMLRT 56

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           +    IV+L+ +F+ R KLYL+ +++    L            ++ R Y  +++ A+   
Sbjct: 57  LKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWC 116

Query: 232 HKCGIVHRDLKPENILMDSD 251
           HK  IVHRD+KPEN+L+  +
Sbjct: 117 HKNDIVHRDIKPENLLISHN 136

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 67.4 bits (164), Expect = 3e-13
 Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 9/150 (6%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN--HVDYMKAER 166
           P ++ + +++G+GAFG+V+        D D+    A+K +  D   ++    V+ ++ E 
Sbjct: 1   PVNWRLGKLLGRGAFGEVYLCY-----DADTGRELAVKQVPFDPDSQETSKEVNALECEI 55

Query: 167 DILTKVTHPFIVQLRYSFQ--TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
            +L  + H  IVQ     +     KL + ++++ GG +   L   G   E+  R YT +I
Sbjct: 56  QLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQI 115

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +  VS+LH   IVHRD+K  NIL DS G+V
Sbjct: 116 LQGVSYLHSNMIVHRDIKGANILRDSAGNV 145

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 7e-13
 Identities = 42/159 (26%), Positives = 82/159 (51%), Gaps = 16/159 (10%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           ++   ++G+GA+G V+  + K V  G    + A+K++  DT    + V  ++ E  +L++
Sbjct: 3   YQRLELIGRGAYGAVY--RGKHVPTGR---VVALKIINLDT--PDDDVSDIQREVALLSQ 55

Query: 172 VTH---PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           +     P I +   S+    +L++I+++  GG +   L + G   E        E++ A+
Sbjct: 56  LRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVR-TLMKAGPIAEKYISVIIREVLVAL 114

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVM-----AAHSLNS 262
            ++HK G++HRD+K  NIL+ + G+V       A  LN 
Sbjct: 115 KYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 67.0 bits (163), Expect = 7e-13
 Identities = 40/140 (28%), Positives = 78/140 (55%), Gaps = 8/140 (5%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G+FG+VF    KG+D+  +  + A+K++  D    ++ ++ ++ E  +L++   P++
Sbjct: 12  IGKGSFGEVF----KGIDN-RTQQVVAIKII--DLEEAEDEIEDIQQEITVLSQCDSPYV 64

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIV 237
            +   S+   +KL++I++++ GG     L R G F E Q      EI+  + +LH    +
Sbjct: 65  TKYYGSYLKGTKLWIIMEYLGGGSAL-DLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI 123

Query: 238 HRDLKPENILMDSDGHVMAA 257
           HRD+K  N+L+   G V  A
Sbjct: 124 HRDIKAANVLLSEQGDVKLA 143

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 65.8 bits (160), Expect = 2e-12
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 11/151 (7%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR--KDTIIKKNHVDYMKAER 166
           P ++ + +++GQGAFG+V+        D D+    A+K ++   ++      V+ ++ E 
Sbjct: 1   PTNWRLGKLLGQGAFGRVYLCY-----DADTGRELAVKQVQFDPESPETSKEVNALECEI 55

Query: 167 DILTKVTHPFIVQLRYSF---QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            +L  + H  IVQ  Y          L + ++ + GG +   L   G   E+  R YT +
Sbjct: 56  QLLKNLLHERIVQY-YGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQ 114

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           I+  VS+LH   IVHRD+K  NIL DS G+V
Sbjct: 115 ILEGVSYLHSNMIVHRDIKGANILRDSVGNV 145

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 21/149 (14%)

Query: 117 VVGQGAFGKVF-----------QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           ++G G+FG V+            VK+  +    +          KD   K++ +D +  E
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASS--------KDR--KRSMLDALARE 56

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L ++ H  IVQ   S      L + L+++ GG +   L   G F E   R +  +I+
Sbjct: 57  IALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQIL 116

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +++LH  GI+HRD+K  NIL+D+ G +
Sbjct: 117 KGLNYLHNRGIIHRDIKGANILVDNKGGI 145

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 65.3 bits (159), Expect = 3e-12
 Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 2/151 (1%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           + +G GAF   +Q +   V  G    +  +  +R  +  ++  V+ ++ E  ++ ++ HP
Sbjct: 6   QQLGTGAFSSCYQARD--VKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHP 63

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
            I+++  +    S   L ++++ GG +   L + G F+E     YT +++  +S+LH+  
Sbjct: 64  HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ 123

Query: 236 IVHRDLKPENILMDSDGHVMAAHSLNSHNQL 266
           I+HRD+K  N+L+DS G  +      +  +L
Sbjct: 124 IIHRDVKGANLLIDSTGQRLRIADFGAAARL 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 64.9 bits (159), Expect = 3e-12
 Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIY---AMKVMRKDTIIKKNHVDYMKAERDILTKV 172
           + +G+GAFG+V+    KG   G         A+K +++D   +   ++    E  I+ K+
Sbjct: 5   KKLGEGAFGEVY----KGKLKGKGGKKKVEVAVKTLKEDASEQ--QIEEFLREARIMRKL 58

Query: 173 THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEIVSAVSHL 231
            HP +V+L         LY++++++ GG L  +L   +          +  +I   + +L
Sbjct: 59  DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYL 118

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
                +HRDL   N L+  +  V
Sbjct: 119 ESKNFIHRDLAARNCLVGENLVV 141

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 7/147 (4%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F+    +G+G +G V++ + K      +  + A+K +R DT  +      ++ E  +L +
Sbjct: 2   FQKVEKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTETEGVPSTAIR-EISLLKE 55

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           + HP IV+L     T +KLYL+ +F++     F              + Y  +++  ++ 
Sbjct: 56  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAF 115

Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
            H   ++HRDLKP+N+L++++G +  A
Sbjct: 116 CHSHRVLHRDLKPQNLLINTEGAIKLA 142

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 64.0 bits (156), Expect = 6e-12
 Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 26/171 (15%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRK-DTIIKKNHVDYMKAERDI 168
           G+F+I + +G+G F  V++             + A+K ++  + +  K   D +K E D+
Sbjct: 2   GNFKIEKKIGKGQFSVVYKAICL-----LDGRVVALKKVQIFEMMDAKARQDCLK-EIDL 55

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGG---HLFFHLYRQG-IFREDQARFYTAEI 224
           L ++ HP +++   SF   ++L ++L+  + G    +  H  +Q  +  E     Y  ++
Sbjct: 56  LKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQL 115

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV---------------MAAHSL 260
            SA+ H+H   I+HRD+KP N+ + + G V                AAHSL
Sbjct: 116 CSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 166

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 63.9 bits (155), Expect = 7e-12
 Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F     +G+G+FG+VF    KG+D+  +  + A+K++  D    ++ ++ ++ E  +L++
Sbjct: 6   FTKLEKIGKGSFGEVF----KGIDN-RTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQ 58

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
              P++ +   S+   +KL++I++++ GG     L   G   E Q      EI+  + +L
Sbjct: 59  CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYL 117

Query: 232 HKCGIVHRDLKPENILMDSDGHVMAA 257
           H    +HRD+K  N+L+   G V  A
Sbjct: 118 HSEKKIHRDIKAANVLLSEHGEVKLA 143

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 63.2 bits (153), Expect = 1e-11
 Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 9/143 (6%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR--KDTIIKKNHVDYMKAERDILTKVT 173
           +++GQGAFG+V+        D D+    A K ++   ++      V  ++ E  +L  + 
Sbjct: 8   KLLGQGAFGRVYLCY-----DVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ 62

Query: 174 HPFIVQLRYSFQTRSK--LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           H  IVQ     + R++  L + ++++ GG +   L   G   E   R YT +I+  +S+L
Sbjct: 63  HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYL 122

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H   IVHRD+K  NIL DS G+V
Sbjct: 123 HSNMIVHRDIKGANILRDSAGNV 145

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 25/145 (17%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD--------TIIKKNHVDYMKAERDIL 169
           +G+G +G V++ + K   +     I A+K +R +        T I+         E  +L
Sbjct: 7   IGEGTYGVVYKARDKLTGE-----IVALKKIRLETEDEGVPSTAIR---------EISLL 52

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGG--HLFFHLYRQGIFREDQARFYTAEIVSA 227
            ++ HP IV+L     + +KLYL+ +F++             G+      + Y  +++  
Sbjct: 53  KELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDP-PLIKSYLYQLLQG 111

Query: 228 VSHLHKCGIVHRDLKPENILMDSDG 252
           +++ H   ++HRDLKP+N+L+D +G
Sbjct: 112 IAYCHSHRVLHRDLKPQNLLIDREG 136

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 63.1 bits (153), Expect = 1e-11
 Identities = 42/138 (30%), Positives = 77/138 (55%), Gaps = 13/138 (9%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--ILTKVT 173
           RVVG+G++G+V  V+ +      +DG     V++K  +   +  +   AE++  +L+++ 
Sbjct: 6   RVVGKGSYGEVSLVRHR------TDG--KQYVIKKLNLRNASRRERKAAEQEAQLLSQLK 57

Query: 174 HPFIVQLRYSFQTRS-KLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSH 230
           HP IV  R S++     LY+++ F  GG L+  L  Q   +  E+Q   +  +I  A+ +
Sbjct: 58  HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQY 117

Query: 231 LHKCGIVHRDLKPENILM 248
           LH+  I+HRDLK +N+ +
Sbjct: 118 LHEKHILHRDLKTQNVFL 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 29/159 (18%)

Query: 112 FEIFRVVGQGAFGKVFQVK----------KKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
           +E    +G+GA+G V++ +          KK       +GI  +  +R+  ++K+     
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGI-PLSTLREIALLKQ----- 54

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRS-----KLYLILDFINGG-HLFFHLYRQGIFRED 215
                  L    HP IV+L             KL L+ + ++     +     +     +
Sbjct: 55  -------LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPE 107

Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +    +++  V  LH   IVHRDLKP+NIL+ SDG V
Sbjct: 108 TIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQV 146

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 62.2 bits (152), Expect = 3e-11
 Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 26/136 (19%)

Query: 121 GAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN------HV-DYMKAERDILTKVT 173
           G FGKV  +K K             K+  +  I  KN       V   MK          
Sbjct: 27  GKFGKVSVLKHKPTQ----------KLFVQKIIKAKNFNAIEPMVHQLMK---------D 67

Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           +P  ++L YS  T     LI+D+I  G LF  L ++G   E + +    ++V A++ LHK
Sbjct: 68  NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHK 127

Query: 234 CGIVHRDLKPENILMD 249
             I+H D+K EN+L D
Sbjct: 128 HNIIHNDIKLENVLYD 143

Length = 267

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 62.3 bits (151), Expect = 3e-11
 Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 18/154 (11%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G FE+  VVG G +G+V+  K + V  G    + A+KVM     + ++  + +K E ++L
Sbjct: 16  GIFELVEVVGNGTYGQVY--KGRHVKTGQ---LAAIKVMD----VTEDEEEEIKLEINML 66

Query: 170 TKVTHPFIVQLRY-SFQTRS------KLYLILDFINGGHL--FFHLYRQGIFREDQARFY 220
            K +H   +   Y +F  +S      +L+L+++F   G +       +    +ED   + 
Sbjct: 67  KKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYI 126

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             EI+  ++HLH   ++HRD+K +N+L+  +  V
Sbjct: 127 CREILRGLAHLHAHKVIHRDIKGQNVLLTENAEV 160

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 61.9 bits (150), Expect = 3e-11
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 11/137 (8%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI--IKKNHVDYMKAERDILTKVTHP 175
           +G+G+FG V+ VK K     +      +KV+++  +  +  N       E  +L+K+ HP
Sbjct: 8   LGKGSFGTVYLVKDKKAVAEER-----LKVLKEIPVGELNPNETVQANQEAQLLSKLDHP 62

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHL--YRQG--IFREDQARFYTAEIVSAVSHL 231
            IV+   SF  R    +I ++  G  L   L   +       E+Q   +  +++  V ++
Sbjct: 63  AIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYM 122

Query: 232 HKCGIVHRDLKPENILM 248
           H+  I+HRDLK +NI +
Sbjct: 123 HQRRILHRDLKAKNIFL 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 28/173 (16%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVM---RKDTIIKKNHVDYMKAERDI 168
           +E   +VG+G++G V + K K     ++  I A+K       D ++KK       A R+I
Sbjct: 3   YENLGLVGEGSYGMVMKCKHK-----ETGQIVAIKKFLESEDDKMVKK------IAMREI 51

Query: 169 --LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL-FFHLYRQGIFREDQARFYTAEIV 225
             L ++ H  +V L   F+ + +LYL+ +F++   L     Y  G+  E + R Y  +I+
Sbjct: 52  RMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGL-DESRVRKYLFQIL 110

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGG 278
             +   H   I+HRD+KPENIL+   G V          +LC F F   L   
Sbjct: 111 RGIEFCHSHNIIHRDIKPENILVSQSGVV----------KLCDFGFARTLAAP 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 61.4 bits (150), Expect = 7e-11
 Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 29/155 (18%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK------NHVDYMKAE 165
           +EI + +G+GA+G V+    K +D          +  ++   +KK      N  D  +  
Sbjct: 9   YEILQKLGKGAYGIVW----KAID----------RRTKEVVALKKIFDAFRNATDAQRTF 54

Query: 166 RDI--LTKVT-HPFIVQLR--YSFQTRSKLYLILDFINGGHLFFH-LYRQGIFREDQARF 219
           R+I  L ++  HP IV+L      +    +YL+ +++       H + R  I  +   R+
Sbjct: 55  REIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMETD---LHAVIRANILEDVHKRY 111

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              +++ A+ ++H   ++HRDLKP NIL++SD  V
Sbjct: 112 IMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRV 146

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 61.1 bits (149), Expect = 8e-11
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 21/153 (13%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD--YMKAERDI- 168
           +EI   +G+G +G+V++ K+K   +G     YA+K  + D    K         A R+I 
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRK---NGKDGKEYAIKKFKGD----KEQYTGISQSACREIA 54

Query: 169 -LTKVTHPFIVQLRYSFQTRS--KLYLILDFINGGHLFFHL---YRQGIFREDQARFY-- 220
            L ++ H  +V L   F   +   +YL+ D+    H  + +   +RQ             
Sbjct: 55  LLRELKHENVVSLVEVFLEHADKSVYLLFDYAE--HDLWQIIKFHRQAKRVSIPPSMVKS 112

Query: 221 -TAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
              +I++ V +LH   ++HRDLKP NIL+  +G
Sbjct: 113 LLWQILNGVHYLHSNWVLHRDLKPANILVMGEG 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 60.8 bits (147), Expect = 9e-11
 Identities = 37/140 (26%), Positives = 76/140 (54%), Gaps = 8/140 (5%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G+FG+V+    KG+D+  +  + A+K++  D    ++ ++ ++ E  +L++   P+I
Sbjct: 12  IGKGSFGEVY----KGIDN-RTKEVVAIKII--DLEEAEDEIEDIQQEITVLSQCDSPYI 64

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIV 237
            +   S+   +KL++I++++ GG     L + G   E        EI+  + +LH    +
Sbjct: 65  TRYYGSYLKGTKLWIIMEYLGGGSAL-DLLKPGPLEETYIATILREILKGLDYLHSERKI 123

Query: 238 HRDLKPENILMDSDGHVMAA 257
           HRD+K  N+L+   G V  A
Sbjct: 124 HRDIKAANVLLSEQGDVKLA 143

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA---ER 166
                   +G+GA G V + + K      +  I+A+K     TI    + D  K    E 
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKN-----TGMIFALK-----TITTDPNPDLQKQILREL 50

Query: 167 DILTKVTHPFIVQLRYSF--QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE- 223
           +I      P+IV+   +F  ++ S + + +++  GG L   +Y++   ++   R    E 
Sbjct: 51  EINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLD-SIYKK--VKKRGGR--IGEK 105

Query: 224 --------IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                   ++  +S+LH   I+HRD+KP NIL+   G V
Sbjct: 106 VLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQV 144

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 25/154 (16%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY-----AMKVMRKDTIIKKNHVDY 161
           I   + ++   +G+G FG V              G Y     A+K ++ D+         
Sbjct: 3   INSKELKLGATIGKGEFGDVML------------GDYRGQKVAVKCLKDDS----TAAQA 46

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY---RQGIFREDQAR 218
             AE  ++T + HP +VQL       + LY++ +++  G L  +L    R  I    Q  
Sbjct: 47  FLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLG 106

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           F   ++   + +L +   VHRDL   N+L+  D 
Sbjct: 107 F-ALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL 139

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 60.0 bits (145), Expect = 2e-10
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
           +  R+    D+E+ + VG G +G V++ +   +  G+   +  +K+   D        D+
Sbjct: 1   DILRRNPQHDYELIQRVGSGTYGDVYKARN--LHTGELAAVKIIKLEPGD--------DF 50

Query: 162 MKAERDI--LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
              +++I  + +  H  IV    S+ +R KL++ +++  GG L    +  G   E Q  +
Sbjct: 51  SLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAY 110

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
              E +  +++LH  G +HRD+K  NIL+  +G V  A
Sbjct: 111 VCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLA 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 119 GQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--LTKVT-HP 175
           G+G F +V   K +    G     YA+K M+K        ++ +   R+I  L +++ HP
Sbjct: 8   GEGTFSEVL--KAQSRKTGKY---YAIKCMKK----HFKSLEQVNNLREIQALRRLSPHP 58

Query: 176 FIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQGI----------FREDQARFYTAEI 224
            I++L         + ++ D   G   L F L    +            E + + Y  ++
Sbjct: 59  NILRL---------IEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQL 109

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSD 251
           + ++ H+H+ GI HRD+KPENIL+  D
Sbjct: 110 LKSLDHMHRNGIFHRDIKPENILIKDD 136

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 32/169 (18%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVM---RKDTIIKKNHVDYMKAERDI--LTKV 172
           +G+G++G VF+ + +     ++  I A+K       D +IKK       A R+I  L ++
Sbjct: 9   IGEGSYGVVFKCRNR-----ETGQIVAIKKFVESEDDPVIKK------IALREIRMLKQL 57

Query: 173 THPFIVQLRYSFQTRSKLYLILDFINGGHLFFH---LYRQGIFREDQARFYTAEIVSAVS 229
            HP +V L   F+ + KL+L+ ++ +  H   +      +G+  E   +    + + AV+
Sbjct: 58  KHPNLVNLIEVFRRKRKLHLVFEYCD--HTVLNELEKNPRGV-PEHLIKKIIWQTLQAVN 114

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLGGG 278
             HK   +HRD+KPENIL+   G +          +LC F F   L G 
Sbjct: 115 FCHKHNCIHRDVKPENILITKQGQI----------KLCDFGFARILTGP 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 58.3 bits (142), Expect = 7e-10
 Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 20/149 (13%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--L 169
           +E+ + +G GA+G V         D  +    A+K +     +  + +D  +  R+I  L
Sbjct: 2   YELLKPIGSGAYGVVCSAV-----DKRTGRKVAIKKISN---VFDDLIDAKRILREIKLL 53

Query: 170 TKVTHPFIVQLRYSFQTRSK-----LYLILDFINGGHLFFH--LYRQGIFREDQARFYTA 222
             + H  I+ L    +  S      +Y++ + +       H  +       +D  +++  
Sbjct: 54  RHLRHENIIGLLDILRPPSPEDFNDVYIVTELM---ETDLHKVIKSPQPLTDDHIQYFLY 110

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I+  + +LH   ++HRDLKP NIL++S+
Sbjct: 111 QILRGLKYLHSANVIHRDLKPSNILVNSN 139

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 57.9 bits (140), Expect = 9e-10
 Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 11/148 (7%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           + E+   +G+G +G V++V  +      +    AMK +R +  + ++  + +  E DIL 
Sbjct: 2   EIEVLDELGKGNYGSVYKVLHR-----PTGVTMAMKEIRLE--LDESKFNQIIMELDILH 54

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGG---HLFFHLYRQGIFREDQARFYTAEIVSA 227
           K   P+IV    +F     +Y+ +++++ G    L+          ED  R  T  +V  
Sbjct: 55  KAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKG 114

Query: 228 VSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  L  +  I+HRD+KP N+L++ +G V
Sbjct: 115 LKFLKEEHNIIHRDVKPTNVLVNGNGQV 142

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-SKLYLILDFINGGHL 202
           A+K++R D   +++     + E  +  ++ HP IV L  S +     L+ + +++ G  L
Sbjct: 7   AIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPGRTL 66

Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
              L   G     +      +++ A++  H  GIVHRDLKP+NI++   G
Sbjct: 67  REVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTG 116

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 57.2 bits (138), Expect = 1e-09
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 29/158 (18%)

Query: 107 IGPGDFEIFRVVGQGAFGKV--------FQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH 158
           I P +    + +G G FG V         +V  K +++G          M ++  I+   
Sbjct: 1   INPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG---------AMSEEDFIE--- 48

Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHL-YRQGIFREDQ 216
                 E  ++ K++HP +VQL Y   T+ K LY++ +F+  G L  +L  RQG   +D 
Sbjct: 49  ------EAKVMMKLSHPKLVQL-YGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDM 101

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 ++   + +L +   +HRDL   N L+ S G V
Sbjct: 102 LLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVV 139

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 56.6 bits (136), Expect = 2e-09
 Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 9/149 (6%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            +F I + +G+G F +V+  +   + DG    +  +++   D +  K   D +K E D+L
Sbjct: 2   ANFRIEKKIGRGQFSEVY--RATCLLDGVPVALKKVQIF--DLMDAKARADCIK-EIDLL 56

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL---FFHLYRQG-IFREDQARFYTAEIV 225
            ++ HP +++   SF   ++L ++L+  + G L     H  +Q  +  E     Y  ++ 
Sbjct: 57  KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC 116

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ H+H   ++HRD+KP N+ + + G V
Sbjct: 117 SALEHMHSRRVMHRDIKPANVFITATGVV 145

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 36/164 (21%)

Query: 112 FEIFRVVGQGAFGKVFQVK----------KKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
           +E    +G+G +GKV++ +          KK   + D +GI         T ++      
Sbjct: 3   YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGI-------PPTALR------ 49

Query: 162 MKAERDILTKVTH-PFIVQLRYSFQTRSK-----LYLILDFINGG-HLFFHLYRQGIFR- 213
              E  +L  ++   +IV+L        K     LYL+ ++++     F     +G  R 
Sbjct: 50  ---EISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRP 106

Query: 214 --EDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
                 + +  +++  V+H HK G++HRDLKP+N+L+D    ++
Sbjct: 107 LPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLL 150

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 23/146 (15%)

Query: 117 VVGQGAFGKVF----------QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           V+G+GA+G V+           VK+  +D  +     A K   K           ++ E 
Sbjct: 7   VLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLA--AEKEYEK-----------LQEEV 53

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 226
           D+L  + H  IVQ   +    + + + ++F+ GG +   L R G   E     YT +I+ 
Sbjct: 54  DLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILD 113

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDG 252
            V++LH   +VHRD+K  N+++  +G
Sbjct: 114 GVAYLHNNCVVHRDIKGNNVMLMPNG 139

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 36/166 (21%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD--------TIIKKNHVDYMK 163
           F+I   +G+G +G+V++ +     D D+  + A+K +R D        T I+        
Sbjct: 9   FDIIGQIGEGTYGQVYKAR-----DKDTGELVALKKVRLDNEKEGFPITAIR-------- 55

Query: 164 AERDILTKVTHPFIVQLR---------YSFQTRSK-LYLILDFINGGHLFFHLYRQGI-- 211
            E  IL ++ H  IV L+           F+      YL+ ++++  H    L   G+  
Sbjct: 56  -EIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD--HDLMGLLESGLVH 112

Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           F ED  + +  +++  +++ HK   +HRD+K  NIL+++ G +  A
Sbjct: 113 FSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLA 158

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 44/167 (26%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD--------TIIKKNHVDYM 162
           D+     +G+G +G V++ + K      +  I AMK +R +        T I+       
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNK-----KTGQIVAMKKIRLESEEEGVPSTAIR------- 48

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFIN------------GGHLFFHLYRQG 210
             E  +L ++ HP IV L+      S+LYLI +F++            G ++   L +  
Sbjct: 49  --EISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKS- 105

Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
                    Y  +I+  +   H   ++HRDLKP+N+L+D+ G +  A
Sbjct: 106 ---------YLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLA 143

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 56.3 bits (135), Expect = 3e-09
 Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 18/154 (11%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G FE+  +VG G +G+V+  K + V  G    + A+KVM     +  +  + +K E ++L
Sbjct: 6   GIFELVELVGNGTYGQVY--KGRHVKTGQ---LAAIKVMD----VTGDEEEEIKQEINML 56

Query: 170 TKVTHPFIVQLRY-SFQTRS------KLYLILDFINGGHL--FFHLYRQGIFREDQARFY 220
            K +H   +   Y +F  ++      +L+L+++F   G +       +    +E+   + 
Sbjct: 57  KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 116

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             EI+  +SHLH+  ++HRD+K +N+L+  +  V
Sbjct: 117 CREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 150

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 55.8 bits (134), Expect = 4e-09
 Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 25/158 (15%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             +EI   +G+G +GKV++V  K   DG    + A+K++  D I   +  + ++AE +IL
Sbjct: 22  DTWEIIETIGKGTYGKVYKVTNK--KDGS---LAAVKIL--DPI--SDVDEEIEAEYNIL 72

Query: 170 TKVT-HPFIVQLRYSFQTRSK-----LYLILDFINGG---HLFFHLYRQGIFREDQAR-- 218
             +  HP +V+    F    K     L+L+L+  NGG    L   L   G  R D+A   
Sbjct: 73  QSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQ-RLDEAMIS 131

Query: 219 --FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              Y A +   + HLH   I+HRD+K  NIL+ ++G V
Sbjct: 132 YILYGALL--GLQHLHNNRIIHRDVKGNNILLTTEGGV 167

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
               + F  +G+G+ G V     K      +    A+K M    + K+   + +  E  I
Sbjct: 18  RSYLDNFVKIGEGSTGIVCIATDK-----STGRQVAVKKM---DLRKQQRRELLFNEVVI 69

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           +    HP IV++  S+    +L+++++F+ GG L   +       E+Q       ++ A+
Sbjct: 70  MRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT-DIVTHTRMNEEQIATVCLAVLKAL 128

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
           S LH  G++HRD+K ++IL+ SDG V
Sbjct: 129 SFLHAQGVIHRDIKSDSILLTSDGRV 154

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 55.1 bits (133), Expect = 6e-09
 Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 13/150 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I P +    + +G G FG V   K +G  D       A+K++R+  +   +  D+++ E 
Sbjct: 1   IDPSELTFLKELGSGQFGVVHLGKWRGKID------VAIKMIREGAM---SEDDFIE-EA 50

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEI 224
            ++ K++HP +VQL Y   T+ + ++++ +++  G L  +L  + G    +      +++
Sbjct: 51  KVMMKLSHPNLVQL-YGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDV 109

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             A+ +L   G +HRDL   N L+  D  V
Sbjct: 110 CEAMEYLESNGFIHRDLAARNCLVGEDNVV 139

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 55.4 bits (133), Expect = 6e-09
 Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 9/148 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           +F+I + +G+G F +V+    +     D   +   KV   + +  K   D +K E D+L 
Sbjct: 3   NFQIEKKIGRGQFSEVY----RATCLLDRKPVALKKVQIFEMMDAKARQDCVK-EIDLLK 57

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHL---FFHLYRQG-IFREDQARFYTAEIVS 226
           ++ HP +++   SF   ++L ++L+  + G L     +  +Q  +  E     Y  ++ S
Sbjct: 58  QLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCS 117

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHV 254
           AV H+H   ++HRD+KP N+ + + G V
Sbjct: 118 AVEHMHSRRVMHRDIKPANVFITATGVV 145

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 54.7 bits (132), Expect = 9e-09
 Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           + +G+G FGKV   +   + D   + + A+K +      ++ H    + E +IL  + H 
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQV-AVKSLNHSG--EEQHRSDFEREIEILRTLDHE 66

Query: 176 FIVQLRY--SFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF--YTAEIVSAVSHL 231
            IV+ +          L LI++++  G L  +L R    + +  R   ++++I   + +L
Sbjct: 67  NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYL 125

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
                +HRDL   NIL++S+  V
Sbjct: 126 GSQRYIHRDLAARNILVESEDLV 148

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 54.3 bits (130), Expect = 2e-08
 Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 30/151 (19%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHP 175
           VG+G +G V++ K+K   DG  D  YA+K +    I        M A R+I  L ++ HP
Sbjct: 9   VGRGTYGHVYKAKRK---DGKDDRDYALKQIEGTGI-------SMSACREIALLRELKHP 58

Query: 176 FIVQLRYSFQTRS--KLYLILDFINGGHLFFHLYRQGIFREDQA------------RFYT 221
            ++ L+  F + +  K++L+ D+    H  +H+ +    R  +A            +   
Sbjct: 59  NVISLQKVFLSHADRKVWLLFDYAE--HDLWHIIK--FHRASKANKKPVQLPRGMVKSLL 114

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            +I+  + +LH   ++HRDLKP NIL+  +G
Sbjct: 115 YQILDGIHYLHANWVLHRDLKPANILVMGEG 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 53.9 bits (129), Expect = 2e-08
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 20/157 (12%)

Query: 109 PGD-FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD 167
           P D +EI   +G+G +GKVF+V  K   +G      A+K++     I +     ++AE +
Sbjct: 16  PSDTWEIIETIGKGTYGKVFKVLNK--KNGSKA---AVKILDPIHDIDEE----IEAEYN 66

Query: 168 ILTKVT-HPFIVQL-----RYSFQTRSKLYLILDFINGGHLF----FHLYRQGIFREDQA 217
           IL  ++ HP +V+      +   +   +L+L+L+  NGG +       L R     E   
Sbjct: 67  ILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPII 126

Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            +   E +  + HLH    +HRD+K  NIL+ ++G V
Sbjct: 127 AYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGV 163

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 14/155 (9%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
              + R +GQG+FG V++   KGV  G+ +   A+K + ++  +++      +A   ++ 
Sbjct: 7   KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEA--SVMK 64

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY---------- 220
           +     +V+L     T     ++++ +  G L  +L R      +               
Sbjct: 65  EFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYL-RSRRPEAENNPGLGPPTLQKFIQ 123

Query: 221 -TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             AEI   +++L     VHRDL   N ++  D  V
Sbjct: 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTV 158

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 17/149 (11%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRK---DTIIKKNHVDYMKAERDI 168
           ++    +G GA+G V       +D      +   K+       T+ K+        E  I
Sbjct: 7   YKPIENIGSGAYGVVC----SAIDTRSGKKVAIKKIPHAFDVPTLAKRTL-----RELKI 57

Query: 169 LTKVTHPFIVQLRYSFQTRSKL----YLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           L    H  I+ +R   +         Y+++D +    L   ++      E+  R++  ++
Sbjct: 58  LRHFKHDNIIAIRDILRPPGADFKDVYVVMDLM-ESDLHHIIHSDQPLTEEHIRYFLYQL 116

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGH 253
           +  + ++H   ++HRDLKP N+L++ D  
Sbjct: 117 LRGLKYIHSANVIHRDLKPSNLLVNEDCE 145

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 13/152 (8%)

Query: 107 IGPGD----FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
           +  GD     E +  +G+G+ G V   ++K      S    A+K+M    + K+   + +
Sbjct: 14  VDQGDPRSLLENYIKIGEGSTGIVCIAREK-----HSGRQVAVKMM---DLRKQQRRELL 65

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
             E  I+    H  +V++  S+    +L+++++F+ GG L   +  Q    E+Q      
Sbjct: 66  FNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQTRLNEEQIATVCE 124

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            ++ A+ +LH  G++HRD+K ++IL+  DG V
Sbjct: 125 SVLQALCYLHSQGVIHRDIKSDSILLTLDGRV 156

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 18/151 (11%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           R +G+GAFGKVF  +   ++  +   + A+K + K+T       D+ + E ++LT   H 
Sbjct: 11  RELGEGAFGKVFLGECYHLEPENDKELVAVKTL-KETASNDARKDFER-EAELLTNFQHE 68

Query: 176 FIVQLRYSFQTR-SKLYLILDFINGGHLFFHLYRQG-----IFREDQARF---------Y 220
            IV+  Y   T      ++ +++  G L   L   G     +   D              
Sbjct: 69  NIVKF-YGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQI 127

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
             +I S + +L     VHRDL   N L+  D
Sbjct: 128 AVQIASGMVYLASQHFVHRDLATRNCLVGYD 158

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 37/178 (20%)

Query: 96  DAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK 155
           D     E  +K     + I RV+G GA G V   K+  V DG+    +A+KV+  + +  
Sbjct: 23  DEATAKEQAKK-----YWISRVLGSGATGTVLCAKR--VSDGEP---FAVKVVDMEGM-- 70

Query: 156 KNHVDYMKA--ERDILTKVTHPFIVQLRYSFQTR--------SKLYLILDFINGGHLFFH 205
            +  D  +A  E   L       IV+    F  +          + L+LD+ N G L   
Sbjct: 71  -SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDL--- 126

Query: 206 LYRQGI---------FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             RQ I         FRE +A     +++ AV H+H   ++HRD+K  NIL+ S+G V
Sbjct: 127 --RQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLV 182

Length = 496

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 52.8 bits (127), Expect = 4e-08
 Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGV--DDGDSDGI-YAMKVMRKDTIIKKNHVDYMKAER 166
            + E  +V+G GAFG V+    KGV   +G+   I  A+KV+R++T   K + + +  E 
Sbjct: 7   TELEKIKVLGSGAFGTVY----KGVWIPEGEKVKIPVAIKVLREETS-PKANKEILD-EA 60

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF------- 219
            ++  V HP +V+L       S++ LI   +  G L  ++      R  +          
Sbjct: 61  YVMASVDHPHVVRL-LGICLSSQVQLITQLMPLGCLLDYV------RNHKDNIGSQYLLN 113

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +  +I   +S+L +  +VHRDL   N+L+ +  HV
Sbjct: 114 WCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHV 148

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 52.9 bits (127), Expect = 4e-08
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV--DYMKAERDILTKVTH 174
            +G+G FG+VF  K KG+++   + +  +K ++K    K  ++  ++ + E D+  K++H
Sbjct: 12  TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQK---TKDENLQSEFRR-ELDMFRKLSH 67

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEIVSAV---- 228
             +V+L    +     Y+IL++ + G L  F    +    +       T + V+      
Sbjct: 68  KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIA 127

Query: 229 ---SHLHKCGIVHRDLKPENILMDSDGHV 254
               HL     VHRDL   N L+ S   V
Sbjct: 128 LGMDHLSNARFVHRDLAARNCLVSSQREV 156

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 52.6 bits (126), Expect = 5e-08
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVM---RKDTIIKKNHVDYMKAERDILTK 171
           F  +GQGA G V+      V  G    I  M +    +K+ II  N +  M+  +     
Sbjct: 24  FEKIGQGASGTVYTAID--VATGQEVAIKQMNLQQQPKKELII--NEILVMRENK----- 74

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
             HP IV    S+    +L+++++++ GG L   +  +    E Q      E + A+  L
Sbjct: 75  --HPNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALEFL 131

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H   ++HRD+K +NIL+  DG V
Sbjct: 132 HSNQVIHRDIKSDNILLGMDGSV 154

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 52.3 bits (125), Expect = 7e-08
 Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 16/168 (9%)

Query: 91  LEHENDAELEAESERKIGPGD----FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMK 146
           + HE   +  A  +  + PGD     + F  +G+G+ G V    +K      +    A+K
Sbjct: 2   VSHE---QFRAALQLVVSPGDPREYLDSFIKIGEGSTGIVCIATEK-----HTGKQVAVK 53

Query: 147 VMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL 206
            M    + K+   + +  E  I+    H  +V +  S+    +L+++++F+ GG L   +
Sbjct: 54  KM---DLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT-DI 109

Query: 207 YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                  E+Q       ++ A+S+LH  G++HRD+K ++IL+ SDG +
Sbjct: 110 VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRI 157

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 52.4 bits (125), Expect = 7e-08
 Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 30/151 (19%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHP 175
           VG+G +G V++ K+K   DG  +  YA+K +    I        M A R+I  L ++ HP
Sbjct: 9   VGRGTYGHVYKAKRK---DGKDEKEYALKQIEGTGI-------SMSACREIALLRELKHP 58

Query: 176 FIVQLRYSFQTRS--KLYLILDFINGGHLFFHLYRQGIFREDQA------------RFYT 221
            ++ L+  F + S  K++L+ D+    H  +H+ +    R  +A            +   
Sbjct: 59  NVIALQKVFLSHSDRKVWLLFDYAE--HDLWHIIK--FHRASKANKKPMQLPRSMVKSLL 114

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            +I+  + +LH   ++HRDLKP NIL+  +G
Sbjct: 115 YQILDGIHYLHANWVLHRDLKPANILVMGEG 145

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 52.4 bits (126), Expect = 8e-08
 Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 34/162 (20%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--- 167
           +FE    +G+G +G V++ +     D  S  I A+K +R            M  ERD   
Sbjct: 8   EFEKLNRIGEGTYGIVYRAR-----DTTSGEIVALKKVR------------MDNERDGIP 50

Query: 168 --------ILTKVTHPFIVQLRYSFQTRS--KLYLILDFING--GHLFFHLYRQGIFRED 215
                   +L  + HP IV+L+     +    ++L++++       L  ++     F E 
Sbjct: 51  ISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTP--FSES 108

Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           Q +    +++  + +LH+  I+HRDLK  N+L+   G +  A
Sbjct: 109 QVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIA 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 52.1 bits (125), Expect = 8e-08
 Identities = 32/145 (22%), Positives = 71/145 (48%), Gaps = 25/145 (17%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD-------TIIKKNHVDYMKAERDILT 170
           +G+G +  V++ + +   +     I A+K +  D       T I+         E  ++ 
Sbjct: 8   LGEGTYATVYKGRNRTTGE-----IVALKEIHLDAEEGTPSTAIR---------EISLMK 53

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGG---HLFFHLYRQGIFREDQARFYTAEIVSA 227
           ++ H  IV+L     T +KL L+ ++++     ++  H  R G    +  + +T +++  
Sbjct: 54  ELKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVR-GALDPNTVKSFTYQLLKG 112

Query: 228 VSHLHKCGIVHRDLKPENILMDSDG 252
           ++  H+  ++HRDLKP+N+L++  G
Sbjct: 113 IAFCHENRVLHRDLKPQNLLINKRG 137

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 23/155 (14%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I P D    + +G G FG V   K +G  D       A+K++++ ++ +   ++    E 
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIE----EA 50

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 226
            ++ K++H  +VQL      +  +Y++ ++++ G L  +L      RE   RF  ++++ 
Sbjct: 51  KVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYL------REHGKRFQPSQLLE 104

Query: 227 -------AVSHLHKCGIVHRDLKPENILMDSDGHV 254
                   +++L     +HRDL   N L+D  G V
Sbjct: 105 MCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCV 139

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 6/138 (4%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           RV+G+G FGKV        +DG  + + A+K ++++    + +    K E +IL  + H 
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGE-MVAVKTLKREC--GQQNTSGWKKEINILKTLYHE 66

Query: 176 FIVQLR--YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
            IV+ +   S Q    L LI++++  G L  +L +  +    Q   +  +I   +++LH 
Sbjct: 67  NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKL-NLAQLLLFAQQICEGMAYLHS 125

Query: 234 CGIVHRDLKPENILMDSD 251
              +HRDL   N+L+D+D
Sbjct: 126 QHYIHRDLAARNVLLDND 143

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 51.6 bits (123), Expect = 1e-07
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVM---RKDTIIKKNHVDYMKAERDILTK 171
           F  +GQGA G V+      V  G    I  M +    +K+ II  N +  M+  ++    
Sbjct: 25  FEKIGQGASGTVYTAMD--VATGQEVAIRQMNLQQQPKKELII--NEILVMRENKN---- 76

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
              P IV    S+    +L+++++++ GG L   +  +    E Q      E + A+  L
Sbjct: 77  ---PNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALEFL 132

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H   ++HRD+K +NIL+  DG V
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSV 155

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 51.6 bits (123), Expect = 1e-07
 Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 19/147 (12%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGI-YAMKVMRKDTIIKKNHVDYMKAERDILTKVTH 174
           +V+G GAFG V+  K   + DG++  I  A+KV+R++T  K N    +  E  ++  V  
Sbjct: 13  KVLGSGAFGTVY--KGIWIPDGENVKIPVAIKVLRENTSPKAN--KEILDEAYVMAGVGS 68

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF-------YTAEIVSA 227
           P++ +L       S + L+   +  G L  ++      RE++ R        +  +I   
Sbjct: 69  PYVCRL-LGICLTSTVQLVTQLMPYGCLLDYV------RENKDRIGSQDLLNWCVQIAKG 121

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           +S+L +  +VHRDL   N+L+ S  HV
Sbjct: 122 MSYLEEVRLVHRDLAARNVLVKSPNHV 148

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 15/155 (9%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA 164
                 D E    +G G  G+V++++ K      +  + A+K MR+    ++N    M  
Sbjct: 10  YPADLNDLENLGEIGSGTCGQVYKMRFK-----KTGHVMAVKQMRRTGNKEENKRILM-- 62

Query: 165 ERDILTKVTH--PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR--QGIFREDQARFY 220
           + D++ K +H  P+IV+    F T S +++ ++ +        L +  QG   ED     
Sbjct: 63  DLDVVLK-SHDCPYIVKCYGYFITDSDVFICMELM--STCLDKLLKRIQGPIPEDILGKM 119

Query: 221 TAEIVSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           T  IV A+ +L  K G++HRD+KP NIL+D+ G+V
Sbjct: 120 TVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNV 154

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 28/158 (17%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY---AMKVMRKDTIIKKNHVDYMKAERD 167
           D +   V+G+G FG+V + + K       DG+    A+K M K+   K +H D+   E +
Sbjct: 8   DIKFQDVIGEGNFGQVLKARIK------KDGLRMDAAIKRM-KEYASKDDHRDF-AGELE 59

Query: 168 ILTKV-THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRED----------- 215
           +L K+  HP I+ L  + + R  LYL +++   G+L   L +  +   D           
Sbjct: 60  VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 119

Query: 216 -----QARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
                Q   + A++   + +L +   +HRDL   NIL+
Sbjct: 120 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 157

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 50.8 bits (121), Expect = 2e-07
 Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 17/163 (10%)

Query: 98  ELEAESERKIGPGD----FEIFRVVGQGAFGKV--FQVKKKGVDDGDSDGIYAMKVMRKD 151
           +  A  +  + PGD     + F  +G+G+ G V    VK  G           +  ++K 
Sbjct: 4   QFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSG----------KLVAVKKM 53

Query: 152 TIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI 211
            + K+   + +  E  I+    H  +V++  S+    +L+++++F+ GG L   +     
Sbjct: 54  DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIVTHTR 112

Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             E+Q       ++ A+S LH  G++HRD+K ++IL+  DG V
Sbjct: 113 MNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRV 155

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           ++      + R +G GAFG+V++   +G D    +   A+K + +    +++  D++  E
Sbjct: 2   EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLM-E 59

Query: 166 RDILTKVTHPFIVQL-RYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQAR---- 218
             I++K  H  IV+L   SF+   + +++L+ + GG L  F    R    R         
Sbjct: 60  ALIMSKFNHQNIVRLIGVSFERLPR-FILLELMAGGDLKSFLRENRPRPERPSSLTMKDL 118

Query: 219 -FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            F   ++     +L +   +HRD+   N L+   G
Sbjct: 119 LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG 153

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 13/133 (9%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +GQG FG+V+     G  +G +    A+K ++  T+  +  +     E  ++ K+ H  +
Sbjct: 14  LGQGCFGEVW----MGTWNGTTR--VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKL 63

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCG 235
           VQL Y+  +   +Y++ ++++ G L   L  +     R  Q     A+I S ++++ +  
Sbjct: 64  VQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 122

Query: 236 IVHRDLKPENILM 248
            VHRDL+  NIL+
Sbjct: 123 YVHRDLRAANILV 135

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 36/154 (23%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +GQG FG+VF+ + K         I A+K +  +   +   +  ++ E  IL  + H  +
Sbjct: 20  IGQGTFGEVFKARHKKTKQ-----IVALKKVLMENEKEGFPITALR-EIKILQLLKHENV 73

Query: 178 VQL------------RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI- 224
           V L            RY    +   YL+ +F    H        G+      +F  +EI 
Sbjct: 74  VNLIEICRTKATPYNRY----KGSFYLVFEFCE--HDL-----AGLLSNKNVKFTLSEIK 122

Query: 225 ------VSAVSHLHKCGIVHRDLKPENILMDSDG 252
                 ++ + ++H+  I+HRD+K  NIL+  DG
Sbjct: 123 KVMKMLLNGLYYIHRNKILHRDMKAANILITKDG 156

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 50.5 bits (120), Expect = 3e-07
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVM---RKDTIIKKNHVDYMKAERDILTK 171
           F  +GQGA G V+      +  G    I  M +    +K+ II  N +  M+  ++    
Sbjct: 24  FEKIGQGASGTVYTAID--IATGQEVAIKQMNLQQQPKKELII--NEILVMRENKN---- 75

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
              P IV    S+    +L+++++++ GG L   +  +    E Q      E + A+  L
Sbjct: 76  ---PNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALDFL 131

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H   ++HRD+K +NIL+  DG V
Sbjct: 132 HSNQVIHRDIKSDNILLGMDGSV 154

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 50.1 bits (119), Expect = 4e-07
 Identities = 34/148 (22%), Positives = 73/148 (49%), Gaps = 11/148 (7%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--IL 169
           +E    +G+G++  V++ K K      +  + A+KV+R    +++       A R+  +L
Sbjct: 7   YEKLEKLGEGSYATVYKGKSKV-----NGKLVALKVIR----LQEEEGTPFTAIREASLL 57

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + H  IV L     T+  L L+ ++++     +     G    +  + +  +++  +S
Sbjct: 58  KGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLS 117

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++H+  I+HRDLKP+N+L+   G +  A
Sbjct: 118 YIHQRYILHRDLKPQNLLISDTGELKLA 145

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 50.0 bits (119), Expect = 5e-07
 Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 46/215 (21%)

Query: 65  HNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFR-------- 116
           H  +    G        +   L  +E  H N+A  + + E+ I   D +I R        
Sbjct: 18  HKANKGGSGKFEM----NDKKLDEEERSHNNNAGEDEDEEKMI---DNDINRSPNKSYKL 70

Query: 117 --VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH 174
             ++G G+FG V++     +    S+ +   KV++           Y   E  I+  + H
Sbjct: 71  GNIIGNGSFGVVYE----AICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNH 118

Query: 175 PFIVQLRYSFQTRSK--------LYLILDFINGGHLFFHLYRQGIFREDQA------RFY 220
             I+ L+  + T           L ++++FI       H Y +   R + A      + Y
Sbjct: 119 INIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQT---VHKYMKHYARNNHALPLFLVKLY 175

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           + ++  A++++H   I HRDLKP+N+L+D + H +
Sbjct: 176 SYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTL 210

Length = 440

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 49.5 bits (118), Expect = 6e-07
 Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 22/152 (14%)

Query: 116 RVVGQGAFGKVFQVKKKGVD-DGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH 174
             +G GAFG+V++     +   G      A+K +RK    ++   +++K E  +++   H
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQE-KKEFLK-EAHLMSNFNH 58

Query: 175 PFIV-QLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA----------- 222
           P IV  L          Y+I++ + GG L  +L    +      RF              
Sbjct: 59  PNIVKLLGVCLLNEP-QYIIMELMEGGDLLSYLRDARV-----ERFGPPLLTLKELLDIC 112

Query: 223 -EIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
            ++     +L +   +HRDL   N L+   G+
Sbjct: 113 LDVAKGCVYLEQMHFIHRDLAARNCLVSEKGY 144

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 22/156 (14%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA-- 164
           +   D E    +G G  G V +VK           I    VM K  +    H+    +  
Sbjct: 2   LRNEDLETISDLGAGNGGSVSKVKH----------IPTGTVMAKKVV----HIGAKSSVR 47

Query: 165 -----ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
                E  I+ +   P+IV    +F   + + + ++F++ G L     + G    +    
Sbjct: 48  KQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGK 107

Query: 220 YTAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
               +V  +++L+    I+HRD+KP NIL++S G +
Sbjct: 108 IAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQI 143

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 48.7 bits (116), Expect = 9e-07
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I     +I +V+G G FG+V   + K    G  +   A+K + K    +K   D++ +E 
Sbjct: 1   IDASCIKIEKVIGAGEFGEVCSGRLK--LPGKREIPVAIKTL-KAGYTEKQRRDFL-SEA 56

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
            I+ +  HP I+ L     T+SK + ++ +++  G L          R+   +F   ++V
Sbjct: 57  SIMGQFDHPNIIHLE-GVVTKSKPVMIVTEYMENGSL------DAFLRKHDGQFTVIQLV 109

Query: 226 -------SAVSHLHKCGIVHRDLKPENILMDSD 251
                  S + +L   G VHRDL   NIL++S+
Sbjct: 110 GMLRGIASGMKYLSDMGYVHRDLAARNILVNSN 142

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE    +G G  G VF+V  K      S  I A K++  +  IK    + +  E  +L 
Sbjct: 6   DFEKISELGAGNGGVVFKVSHK-----PSGLIMARKLIHLE--IKPAIRNQIIRELQVLH 58

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  ++  +++
Sbjct: 59  ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTY 118

Query: 231 L-HKCGIVHRDLKPENILMDSDGHV 254
           L  K  I+HRD+KP NIL++S G +
Sbjct: 119 LREKHKIMHRDVKPSNILVNSRGEI 143

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQ--VKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA 164
           I P    I +V+G G FG+V +  +K  G  + D     A+K   K     K  +D++  
Sbjct: 1   IDPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEID----VAIK-TLKAGSSDKQRLDFL-T 54

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
           E  I+ +  HP I++L     T+S+ + +I +++  G L   L      RE+  +F   +
Sbjct: 55  EASIMGQFDHPNIIRL-EGVVTKSRPVMIITEYMENGSLDKFL------RENDGKFTVGQ 107

Query: 224 IV-------SAVSHLHKCGIVHRDLKPENILMDSD 251
           +V       S + +L +   VHRDL   NIL++S+
Sbjct: 108 LVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSN 142

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 48.1 bits (114), Expect = 2e-06
 Identities = 43/176 (24%), Positives = 66/176 (37%), Gaps = 37/176 (21%)

Query: 92  EHENDAE----LEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKV 147
           E E+DA+    L AE+   I    F I      GA G  F                    
Sbjct: 70  EDESDADASLALCAEARAGIEKAGFSILETFTPGAEGFAFACIDNKT------------- 116

Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
             +  +IK         E  IL  + HP I+QL+ +F       LIL            Y
Sbjct: 117 -CEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP----------RY 165

Query: 208 RQGIF--REDQARFYTAEIVS-------AVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +  ++     +      +I++       A+ +LH+  I+HRD+K ENI ++  G V
Sbjct: 166 KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDV 221

Length = 391

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 32/140 (22%), Positives = 73/140 (52%), Gaps = 15/140 (10%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
            ++ + +G G FG+V+     G  +G++    A+K ++  T+  ++ ++    E  I+ K
Sbjct: 8   LQLIKKLGNGQFGEVWM----GTWNGNTK--VAVKTLKPGTMSPESFLE----EAQIMKK 57

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRE---DQARFYTAEIVSAV 228
           + H  +VQL Y+  +   +Y++ ++++ G L   L + G  R           A++ + +
Sbjct: 58  LRHDKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGM 115

Query: 229 SHLHKCGIVHRDLKPENILM 248
           +++ +   +HRDL+  NIL+
Sbjct: 116 AYIERMNYIHRDLRSANILV 135

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 47.8 bits (113), Expect = 2e-06
 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 115 FRVVGQGAFGKVFQVKKKGVDDGDS-DGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT 173
           +  +GQGA G VF           +   I   K  +K+ II  N +  MK       ++ 
Sbjct: 24  YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELII--NEILVMK-------ELK 74

Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           +P IV    SF    +L+++++++ GG L   +  +    E Q      E + A+  LH 
Sbjct: 75  NPNIVNFLDSFLVGDELFVVMEYLAGGSLT-DVVTETCMDEAQIAAVCRECLQALEFLHA 133

Query: 234 CGIVHRDLKPENILMDSDGHV 254
             ++HRD+K +N+L+  DG V
Sbjct: 134 NQVIHRDIKSDNVLLGMDGSV 154

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 26/162 (16%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM--KAERD 167
            D+EI   +G+G FG+V++ ++       +  + A+K      I+  N  D     A R+
Sbjct: 8   RDYEILGKLGEGTFGEVYKARQI-----KTGRVVALK-----KILMHNEKDGFPITALRE 57

Query: 168 I--LTKVTHPFIVQL------RYSFQTRSK--LYLILDFINGGH-LFFHLYRQGI-FRED 215
           I  L K+ HP +V L      R     R +  +Y++  +++  H L   L    +   E 
Sbjct: 58  IKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD--HDLSGLLENPSVKLTES 115

Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           Q + Y  +++  +++LH+  I+HRD+K  NIL+D+ G +  A
Sbjct: 116 QIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIA 157

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 10/142 (7%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHP 175
           +G+G +G VF+ K +     ++  I A+K +R D     +      A R+I  L ++ H 
Sbjct: 8   IGEGTYGTVFKAKNR-----ETHEIVALKRVRLD---DDDEGVPSSALREICLLKELKHK 59

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
            IV+L     +  KL L+ ++ +     +     G    +  + +  +++  ++  H   
Sbjct: 60  NIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN 119

Query: 236 IVHRDLKPENILMDSDGHVMAA 257
           ++HRDLKP+N+L++ +G +  A
Sbjct: 120 VLHRDLKPQNLLINKNGELKLA 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 24/161 (14%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-IKKNHVDYMKAERDI 168
             ++I R++G+G  G+V+       D   S  + A+K +R+D          +++ E  I
Sbjct: 2   QRYDIIRLIGKGGMGEVYL----AYDPVCSRRV-ALKKIREDLSENPLLKKRFLR-EAKI 55

Query: 169 LTKVTHPFIVQLRYSFQTRSKL-YLILDFING---GHLFFHLYRQGIFREDQAR------ 218
              + HP IV + YS  +     Y  + +I G     L   ++++    ++ A       
Sbjct: 56  AADLIHPGIVPV-YSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGA 114

Query: 219 ----FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
               F+   I + + ++H  G++HRDLKP+NIL+   G V+
Sbjct: 115 FLSIFHK--ICATIEYVHSKGVLHRDLKPDNILLGLFGEVV 153

Length = 932

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 18/143 (12%)

Query: 118 VGQGAFGKVFQ-VKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF 176
           +G G +G+V++ V KK           A+K +++DT+     V+    E  ++ ++ HP 
Sbjct: 14  LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPN 63

Query: 177 IVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQ---ARFYTA-EIVSAVSHLH 232
           +VQL          Y+I +F+  G+L  +L      R++       Y A +I SA+ +L 
Sbjct: 64  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLE 121

Query: 233 KCGIVHRDLKPENILMDSDGHVM 255
           K   +HRDL   N L+  + H++
Sbjct: 122 KKNFIHRDLAARNCLV-GENHLV 143

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 6/113 (5%)

Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           I A+KV+  D  ++      + +E +IL K   P+I+    +F   +++ +  +F++GG 
Sbjct: 28  ILAVKVIPLDITVELQK--QIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS 85

Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L   +YR+ I      R   A +V  +++L    I+HRD+KP N+L+++ G V
Sbjct: 86  L--DVYRK-IPEHVLGRIAVA-VVKGLTYLWSLKILHRDVKPSNMLVNTRGQV 134

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 46.9 bits (111), Expect = 4e-06
 Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 15/144 (10%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           + ++ + +G+G FG V     +G          A+K ++ D   +        AE  ++T
Sbjct: 7   ELKLLQTIGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQA-----FLAEASVMT 54

Query: 171 KVTHPFIVQLR-YSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSA 227
           ++ H  +VQL     + +  LY++ +++  G L  +L  +G  +   D    ++ ++  A
Sbjct: 55  QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114

Query: 228 VSHLHKCGIVHRDLKPENILMDSD 251
           + +L     VHRDL   N+L+  D
Sbjct: 115 MEYLEANNFVHRDLAARNVLVSED 138

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 46.9 bits (111), Expect = 4e-06
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGI---YAMKVMRKDTIIKKNHVDYMKAERD 167
           +F+  +V+G GAFG V+    KG+   + + +    A+K +R+ T  K N    +  E  
Sbjct: 8   EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAY 61

Query: 168 ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF-------Y 220
           ++  V +P + +L       S + LI   +  G L  ++      RE +          +
Sbjct: 62  VMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYV------REHKDNIGSQYLLNW 114

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +I   +++L +  +VHRDL   N+L+ +  HV
Sbjct: 115 CVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHV 148

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY-AMKVMRK--DTIIKKNHVDYMKAE 165
           P  ++    VG GA+G+V              G   A+K + +   + I   H      E
Sbjct: 14  PDRYQNLSPVGSGAYGQVCSAFDTKT------GRKVAIKKLSRPFQSAI---HAKRTYRE 64

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKL------YLILDFINGGHLFFHLYRQGIFREDQARF 219
             +L  + H  ++ L   F   S L      YL+   +  G    ++ +     +D  +F
Sbjct: 65  LRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM--GADLNNIVKCQKLSDDHIQF 122

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
              +I+  + ++H  GI+HRDLKP NI ++ D
Sbjct: 123 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 154

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 47.4 bits (112), Expect = 5e-06
 Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 19/153 (12%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           ++E+ + +G G FG+VF VK K   +      +  K +     +K+     +  E +++ 
Sbjct: 14  EYEVIKKIGNGRFGEVFLVKHKRTQE-----FFCWKAISYRG-LKEREKSQLVIEVNVMR 67

Query: 171 KVTHPFIVQL--RYSFQTRSKLYLILDFINGGHLFFHL---YRQ-GIFREDQARFYTAEI 224
           ++ H  IV+   R+  +   KLY++++F + G L  ++   Y+  G   E      T ++
Sbjct: 68  ELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQL 127

Query: 225 VSAVSHLHKCG-------IVHRDLKPENILMDS 250
           + A+++ H          ++HRDLKP+NI + +
Sbjct: 128 LHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160

Length = 1021

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 46.4 bits (111), Expect = 5e-06
 Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 22/151 (14%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           ++E    + +G +G V++ + K      +  I A+K ++ +   +   +  ++ E +IL 
Sbjct: 6   EYEKLNRIEEGTYGVVYRARDK-----KTGEIVALKKLKMEKEKEGFPITSLR-EINILL 59

Query: 171 KVTHPFIVQLRYSF--QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI---- 224
           K+ HP IV ++         K+Y++++++       H  +  +    Q  F  +E+    
Sbjct: 60  KLQHPNIVTVKEVVVGSNLDKIYMVMEYVE------HDLKSLMETMKQ-PFLQSEVKCLM 112

Query: 225 ---VSAVSHLHKCGIVHRDLKPENILMDSDG 252
              +S V+HLH   I+HRDLK  N+L+++ G
Sbjct: 113 LQLLSGVAHLHDNWILHRDLKTSNLLLNNRG 143

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 6/104 (5%)

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E DIL  ++H  I+ L ++++ +S + +++       LF ++ R G    +QA      +
Sbjct: 136 EIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRL 194

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVM-----AAHSLNSH 263
           + A+++LH  GI+HRD+K ENI +D   + +     AA  L++H
Sbjct: 195 LEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238

Length = 392

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 17/151 (11%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA-----------ER 166
           +G+G +GKV +       D  +  I A+K ++   I      D               E 
Sbjct: 17  LGEGTYGKVEKAY-----DTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLREL 71

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVS 226
            I+ ++ H  I+ L   +     + L++D +    L   + R+    E Q +    +I++
Sbjct: 72  KIMNEIKHENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILN 130

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            ++ LHK   +HRDL P NI ++S G    A
Sbjct: 131 GLNVLHKWYFMHRDLSPANIFINSKGICKIA 161

Length = 335

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 45.7 bits (108), Expect = 8e-06
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 15/138 (10%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF 176
           ++G+G FG V Q +  G          A+K ++ D   +         E  ++TK+ H  
Sbjct: 13  IIGEGEFGAVLQGEYTGQK-------VAVKNIKCDVTAQA-----FLEETAVMTKLHHKN 60

Query: 177 IVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF--YTAEIVSAVSHLHKC 234
           +V+L       + LY++++ ++ G+L   L  +G       +   ++ ++   + +L   
Sbjct: 61  LVRL-LGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK 119

Query: 235 GIVHRDLKPENILMDSDG 252
            +VHRDL   NIL+  DG
Sbjct: 120 KLVHRDLAARNILVSEDG 137

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 45.7 bits (108), Expect = 8e-06
 Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 25/141 (17%)

Query: 118 VGQGAFG----KVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT 173
           +G G FG     V++++KK +D        A+KV++ +   +K+  D M  E +I+ ++ 
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQID-------VAIKVLKNEN--EKSVRDEMMREAEIMHQLD 53

Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGG--HLFFHLYRQGIFREDQARFYTAEIVSAVS-- 229
           +P+IV++    +  + L L+++  +GG  + F    +  I   +       E++  VS  
Sbjct: 54  NPYIVRMIGVCEAEA-LMLVMEMASGGPLNKFLSGKKDEITVSN-----VVELMHQVSMG 107

Query: 230 --HLHKCGIVHRDLKPENILM 248
             +L     VHRDL   N+L+
Sbjct: 108 MKYLEGKNFVHRDLAARNVLL 128

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 8/143 (5%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH 174
           R +G+G FGKV   +     +GD+ G   A+K ++ ++    NH+  +K E +IL  + H
Sbjct: 10  RDLGEGHFGKVELCRYD--PEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYH 65

Query: 175 PFIVQLR--YSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHL 231
             IV+ +   +    + + LI++F+  G L  +L R +      Q   Y  +I   + +L
Sbjct: 66  ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL 125

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
                VHRDL   N+L++S+  V
Sbjct: 126 GSRQYVHRDLAARNVLVESEHQV 148

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 19/147 (12%)

Query: 107 IGPGDFEIFRVVGQGAFGKVF----QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
           I P +  + + +G G FG V+      K+K           A+K +R+  + +++     
Sbjct: 1   IHPSELTLVQEIGSGQFGLVWLGYWLEKRK----------VAIKTIREGAMSEED----F 46

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYT 221
             E  ++ K++HP +VQL      RS + L+ +F+  G L  +L  Q G F ++      
Sbjct: 47  IEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMC 106

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILM 248
            ++   +++L    ++HRDL   N L+
Sbjct: 107 LDVCEGMAYLESSNVIHRDLAARNCLV 133

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 15/93 (16%)

Query: 168 ILTKVTHPFIVQL------RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRE-DQAR-- 218
           ++  V H  I+ L      + S +    +YL+++ ++          Q I  + D  R  
Sbjct: 68  LMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD------ANLCQVIQMDLDHERMS 121

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 122 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 154

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 25/148 (16%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD--------TIIKKNHVDYMK 163
           +E    +G+G +G V++ + +  ++       A+K +R +        T I+        
Sbjct: 4   YEKVEKIGEGTYGVVYKARDRVTNE-----TIALKKIRLEQEDEGVPSTAIR-------- 50

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQ--ARFYT 221
            E  +L ++ H  IV+L+    +  +LYL+ ++++   L  H+     F ++    + Y 
Sbjct: 51  -EISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYL 108

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMD 249
            +I+  +++ H   ++HRDLKP+N+L+D
Sbjct: 109 YQILRGIAYCHSHRVLHRDLKPQNLLID 136

Length = 294

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           R +G G FG+V+     G  +G +    A+K ++  T+  +    +++ E  I+ K+ H 
Sbjct: 12  RKLGAGQFGEVW----MGTWNGTTK--VAVKTLKPGTMSPE---AFLQ-EAQIMKKLRHD 61

Query: 176 FIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQGIFREDQARF--------YTAEIVS 226
            +VQL Y+  +  + +Y++ ++++ G L   L      +  + +           A+I  
Sbjct: 62  KLVQL-YAVCSEEEPIYIVTEYMSKGSLLDFL------KSGEGKKLRLPQLVDMAAQIAE 114

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHV 254
            +++L     +HRDL   NIL+  +  V
Sbjct: 115 GMAYLESRNYIHRDLAARNILV-GENLV 141

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 29/156 (18%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK----NHVDY- 161
           +GP  ++    +G+GA+G V                  +KV      IKK     H  + 
Sbjct: 3   VGP-RYQNLSYIGEGAYGMVCSAT---------HKPTGVKVA-----IKKISPFEHQTFC 47

Query: 162 MKAERDI--LTKVTHPFIVQLR-----YSFQTRSKLYLILDFINGGHLFFHLYRQGIFRE 214
            +  R+I  L +  H  I+ +       SF++ + +Y++ + +      + L +      
Sbjct: 48  QRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETD--LYKLIKTQHLSN 105

Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
           D  +++  +I+  + ++H   ++HRDLKP N+L+++
Sbjct: 106 DHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 141

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 13/150 (8%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR---KDTIIKKNHVDYMKAERDI 168
           F   R +G G+FG V+  +     D  ++ + A+K M    K +  K    D +K E   
Sbjct: 17  FTDLREIGHGSFGAVYFAR-----DVRTNEVVAIKKMSYSGKQSNEKWQ--DIIK-EVRF 68

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDF-INGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
           L ++ HP  ++ +  +      +L++++ +        ++++ + +E +        +  
Sbjct: 69  LQQLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPL-QEVEIAAICHGALQG 127

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +++LH    +HRD+K  NIL+   G V  A
Sbjct: 128 LAYLHSHERIHRDIKAGNILLTEPGTVKLA 157

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 12/149 (8%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D E+   +G+GA+G V +++        +  I A+K +R     ++     M  + DI  
Sbjct: 2   DLEVIEELGRGAYGVVDKMRHV-----PTGTIMAVKRIRATVNSQEQKRLLM--DLDISM 54

Query: 171 KVTH-PFIVQLRYSFQTRSKLYLILDFINGG--HLFFHLYRQGIF-REDQARFYTAEIVS 226
           +    P+ V    +      +++ ++ ++      +  +Y +G+   ED        IV 
Sbjct: 55  RSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVK 114

Query: 227 AVSHLH-KCGIVHRDLKPENILMDSDGHV 254
           A+ +LH K  ++HRD+KP N+L++ +G V
Sbjct: 115 ALEYLHSKLSVIHRDVKPSNVLINRNGQV 143

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 147 VMRKDTIIKKNHVDYMKAERDILT--KVTHPFIVQLRYSFQTRSKLYLILDFINGGH--- 201
            ++K  +   +  D    +++I+T  ++ HP I+    SF   S+LY++   +  G    
Sbjct: 29  AVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88

Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM-----A 256
           L    + +G   E    F   ++++A+ ++H  G +HR +K  +IL+  DG V+      
Sbjct: 89  LLKTHFPEG-LPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRY 147

Query: 257 AHSLNSHNQ-LCCFFFF 272
           + S+  H +       F
Sbjct: 148 SVSMIKHGKRQRVVHDF 164

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 14/143 (9%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           + + + +  G+ G+VF   K     G  D +  +K+ +K T +          E  +L  
Sbjct: 68  YTVIKTLTPGSEGRVFVATK----PGQPDPV-VLKIGQKGTTL---------IEAMLLQN 113

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           V HP +++++ +  + +   ++L   +     +   R      DQA     +I+  + +L
Sbjct: 114 VNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYL 173

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H   I+HRD+K ENI ++    V
Sbjct: 174 HAQRIIHRDVKTENIFINDVDQV 196

Length = 357

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF 176
           +G+G FG V   +   +   D+ G + A+K ++  T     H+   + E +IL  + H  
Sbjct: 12  LGKGNFGSVELCRYDPL--QDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDN 66

Query: 177 IVQLR---YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF--YTAEIVSAVSHL 231
           IV+ +   YS   R  L L+++++  G L  +L +    R D  +   Y ++I   + +L
Sbjct: 67  IVKYKGVCYS-AGRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYL 124

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
                VHRDL   NIL++S+  V
Sbjct: 125 GSKRYVHRDLATRNILVESENRV 147

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 24/177 (13%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            + E  R +GQGAFG+VFQ +  G+   +   + A+K M K+        D+ + E  ++
Sbjct: 5   NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVK-MLKEEASADMQADFQR-EAALM 62

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-------QGIFREDQARFYT- 221
            +  HP IV+L         + L+ +++  G L   L                 AR    
Sbjct: 63  AEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGL 122

Query: 222 --------------AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN 264
                          ++ + +++L +   VHRDL   N L+  +  V  A    S N
Sbjct: 123 NPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 179

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 26/157 (16%)

Query: 111 DFEIFRVVGQGAFGKVFQ--VKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           D +   V+G+G FG+V +  +KK      D   + A   M K+   + +H D+   E ++
Sbjct: 3   DIKFEDVIGEGNFGQVIRAMIKK------DGLKMNAAIKMLKEFASENDHRDF-AGELEV 55

Query: 169 LTKV-THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRED------------ 215
           L K+  HP I+ L  + + R  LY+ +++   G+L   L +  +   D            
Sbjct: 56  LCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTAST 115

Query: 216 ----QARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
               Q   + +++ + + +L +   +HRDL   N+L+
Sbjct: 116 LTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV 152

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 54/264 (20%), Positives = 102/264 (38%), Gaps = 46/264 (17%)

Query: 18  KKLTITPPSASSPDFDFTEV-----FGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFV 72
           +K++I  P  + P      +      G L   R N    AS        +        F 
Sbjct: 64  EKVSIMAPERADPTGAHRALEDAAPAGELLVPRSNADLFASAGDGPSGAEDSDASHLDFD 123

Query: 73  GPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVG---QGAFGKVF-- 127
              P  A    +PL   +L+H+++                  FRV+     GAFGK+F  
Sbjct: 124 EAPPDAA--GPVPLAQAKLKHDDEF--------------LAHFRVIDDLPAGAFGKIFIC 167

Query: 128 --------QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQ 179
                      ++GV+  +       +++ K           ++ E   L ++ H  I++
Sbjct: 168 ALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227

Query: 180 LRYSFQTRSKLYLI---LDFINGGHLFFHLYRQGIFRED-----QARFYTAEIVSAVSHL 231
           +    ++ +  Y+I    DF     L+  +Y +    +D     Q R    +++ AV ++
Sbjct: 228 IEEILRSEANTYMITQKYDF----DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYI 283

Query: 232 HKCGIVHRDLKPENILMDSDGHVM 255
           H   ++HRD+K ENI ++ DG ++
Sbjct: 284 HDKKLIHRDIKLENIFLNCDGKIV 307

Length = 501

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMD 249
           +I+ A+  LH  GIVHRD+KP+NI+  
Sbjct: 263 QILFALDGLHSTGIVHRDVKPQNIIFS 289

Length = 566

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 43.9 bits (103), Expect = 4e-05
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 9/142 (6%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGI-YAMKVMRKDTIIKKNHVDYMKAERDILTKVTH 174
           +V+G GAFG V+  K   V +G++  I  A+K++ + T  K N V++M  E  I+  + H
Sbjct: 13  KVLGSGAFGTVY--KGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMD-EALIMASMDH 68

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEIVSAVSHLH 232
           P +V+L         + L+   +  G L  + H ++  I  +     +  +I   + +L 
Sbjct: 69  PHLVRL-LGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLN-WCVQIAKGMMYLE 126

Query: 233 KCGIVHRDLKPENILMDSDGHV 254
           +  +VHRDL   N+L+ S  HV
Sbjct: 127 ERRLVHRDLAARNVLVKSPNHV 148

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 17/159 (10%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F + R++G+G FG V + + K  +DG    + A+K+++ D     +  ++++ E   + +
Sbjct: 1   FTLGRMLGKGEFGSVREAQLK-SEDGSFQKV-AVKMLKADIFSSSDIEEFLR-EAACMKE 57

Query: 172 VTHPFIVQL-RYSFQTRSKLYL-----ILDFINGG--HLFFHLYRQG-----IFREDQAR 218
             HP +++L   S ++R+K  L     IL F+  G  H F  + R G     +  +   R
Sbjct: 58  FDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVR 117

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           F   +I S + +L     +HRDL   N +++ +  V  A
Sbjct: 118 FMI-DIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVA 155

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 43.9 bits (103), Expect = 4e-05
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 28/152 (18%)

Query: 117 VVGQGAFGKVFQ--VKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH 174
           V+G+G FG+V +  +KK G+       + A     K+   K +H D+   E ++L K+ H
Sbjct: 2   VIGEGNFGQVLKARIKKDGLR------MDAAIKRMKEYASKDDHRDF-AGELEVLCKLGH 54

Query: 175 -PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQA---------------- 217
            P I+ L  + + R  LYL +++   G+L   L +  +   D A                
Sbjct: 55  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 114

Query: 218 -RFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
             F  A++   + +L +   +HRDL   NIL+
Sbjct: 115 LHF-AADVARGMDYLSQKQFIHRDLAARNILV 145

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 38/162 (23%)

Query: 115 FRVVGQGAFGKVFQ-----------VKKKGVDDGDS--DGIYAMKVMRK---DTIIKKNH 158
            R +G G+ G VF            VKK  + D  S    +  +K++R+   D I+K   
Sbjct: 10  LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYE 69

Query: 159 VDYMKAERD-----ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFR 213
           V              LT++   +IVQ           Y+  D  N       +  QG   
Sbjct: 70  VLGPSGSDLTEDVGSLTELNSVYIVQE----------YMETDLAN-------VLEQGPLS 112

Query: 214 EDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           E+ AR +  +++  + ++H   ++HRDLKP N+ ++++  V+
Sbjct: 113 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVL 154

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 26/155 (16%)

Query: 106 KIGPGDFEIFRVVGQGAF----GKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
           K+G G F    VV +G +    GKV  V              A+K ++ D +      D+
Sbjct: 2   KLGDGSF---GVVRRGEWSTSGGKVIPV--------------AVKCLKSDKL-SDIMDDF 43

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF--FHLYRQGIFREDQARF 219
           +K E  I+  + H  +++L Y       L ++ +    G L         G F       
Sbjct: 44  LK-EAAIMHSLDHENLIRL-YGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCD 101

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           Y  +I + + +L     +HRDL   NIL+ SD  V
Sbjct: 102 YAVQIANGMRYLESKRFIHRDLAARNILLASDDKV 136

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 43.5 bits (102), Expect = 6e-05
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)

Query: 156 KNHVDYMKAERDI--LTKVTHPFIVQL------RYSFQTRSKLYLILDFINGGHL-FFHL 206
           +N     +A R++  L  V H  I+ L      + S +    +YL+++ ++       H+
Sbjct: 59  QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM 118

Query: 207 YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
                   ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 119 E----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 159

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 42.9 bits (101), Expect = 7e-05
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 19/147 (12%)

Query: 113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV 172
           +I  V+G G FG+V + + K    G  +   A+K + K    +K   D++ +E  I+ + 
Sbjct: 7   KIEEVIGAGEFGEVCRGRLKLP--GKREIFVAIKTL-KSGYTEKQRRDFL-SEASIMGQF 62

Query: 173 THPFIVQLRYSFQTRSKLYLIL-DFINGGHLFFHLYRQGIFREDQARFYTAEIV------ 225
            HP I+ L     T+S+  +I+ +F+  G L          R++  +F   ++V      
Sbjct: 63  DHPNIIHLE-GVVTKSRPVMIITEFMENGAL------DSFLRQNDGQFTVIQLVGMLRGI 115

Query: 226 -SAVSHLHKCGIVHRDLKPENILMDSD 251
            + + +L +   VHRDL   NIL++S+
Sbjct: 116 AAGMKYLSEMNYVHRDLAARNILVNSN 142

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 43.0 bits (101), Expect = 7e-05
 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 5/147 (3%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           +I P      +V+G G FG+VF+   K    G  +   A+K + K    +K   D++ +E
Sbjct: 1   EIHPSHITKQKVIGAGEFGEVFRGILK--MPGRKEVAVAIKTL-KPGYTEKQRQDFL-SE 56

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-RQGIFREDQARFYTAEI 224
             I+ + +H  I++L           +I +++  G L  +L    G F   Q       I
Sbjct: 57  ASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGI 116

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSD 251
            + + +L     VHRDL   NIL++S+
Sbjct: 117 AAGMKYLSDMNYVHRDLAARNILVNSN 143

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 43.0 bits (101), Expect = 7e-05
 Identities = 36/168 (21%), Positives = 69/168 (41%), Gaps = 35/168 (20%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGI--YAMKVMRKDTIIKKNHVDYMK--AERDILTK 171
           + +G+G FGKV  VK          G    A+K+++++     +  +     +E ++L +
Sbjct: 6   KTLGEGEFGKV--VKATAFRLKGRAGYTTVAVKMLKENA----SSSELRDLLSEFNLLKQ 59

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQ--------GIFREDQARF-- 219
           V HP +++L  +      L LI+++   G L  F    R+           R        
Sbjct: 60  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNP 119

Query: 220 ------------YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
                       +  +I   + +L +  +VHRDL   N+L+ ++G  M
Sbjct: 120 DERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV-AEGRKM 166

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 43.2 bits (101), Expect = 8e-05
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 17/119 (14%)

Query: 147 VMRKDTIIKK------NHVDYMKAERD-ILTK-VTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R+ +L K V H  I+ L   F  +  L      YL
Sbjct: 40  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYL 99

Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 100 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 155

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 43.5 bits (102), Expect = 8e-05
 Identities = 16/32 (50%), Positives = 25/32 (78%)

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++++ +  LH+ GIVHRD+KPEN+L+  DG V
Sbjct: 317 QVLTGLRKLHRIGIVHRDIKPENLLVTVDGQV 348

Length = 507

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 42.8 bits (101), Expect = 9e-05
 Identities = 28/147 (19%), Positives = 65/147 (44%), Gaps = 12/147 (8%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF 176
           ++ +G FG++F         G  + ++   V    + I+   V  +  E  +L  ++H  
Sbjct: 13  LLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQ---VTLLLQESCLLYGLSHQN 69

Query: 177 IVQ-LRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA--------EIVSA 227
           I+  L    +     +++  ++N G+L   L +  +   +  +  +         +I   
Sbjct: 70  ILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACG 129

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           +S+LHK G++H+D+   N ++D +  V
Sbjct: 130 MSYLHKRGVIHKDIAARNCVIDEELQV 156

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 42.7 bits (100), Expect = 9e-05
 Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 15/134 (11%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +GQG FG+V+     G  +G +    A+K ++  T++ +  +     E  I+ K+ H  +
Sbjct: 14  LGQGCFGEVWM----GTWNGTTK--VAIKTLKPGTMMPEAFLQ----EAQIMKKLRHDKL 63

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG---IFREDQARFYTAEIVSAVSHLHKC 234
           V L Y+  +   +Y++ +F+  G L   L ++G     +  Q     A+I   ++++ + 
Sbjct: 64  VPL-YAVVSEEPIYIVTEFMGKGSLLDFL-KEGDGKYLKLPQLVDMAAQIADGMAYIERM 121

Query: 235 GIVHRDLKPENILM 248
             +HRDL+  NIL+
Sbjct: 122 NYIHRDLRAANILV 135

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE    +G G  G V +V  +      S  I A K++  +  IK    + +  E  +L 
Sbjct: 2   DFEKLGELGAGNGGVVTKVLHR-----PSGLIMARKLIHLE--IKPAIRNQIIRELKVLH 54

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +   P+IV    +F +  ++ + ++ ++GG L   L + G   E+     +  ++  +++
Sbjct: 55  ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTY 114

Query: 231 LH-KCGIVHRDLKPENILMDSDGHV 254
           L  K  I+HRD+KP NIL++S G +
Sbjct: 115 LREKHKIMHRDVKPSNILVNSRGEI 139

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 25/150 (16%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           +F + R +G G FG+V++   K           A+K+++ D        D+ K E   L 
Sbjct: 7   EFTLERKLGSGYFGEVWEGLWKNRVR------VAIKILKSDD--LLKQQDFQK-EVQALK 57

Query: 171 KVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQGIFREDQARFYT-------- 221
           ++ H  ++ L ++  +  + +Y+I + +  G L   L      R  + +           
Sbjct: 58  RLRHKHLISL-FAVCSVGEPVYIITELMEKGSLLAFL------RSPEGQVLPVASLIDMA 110

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            ++   +++L +   +HRDL   NIL+  D
Sbjct: 111 CQVAEGMAYLEEQNSIHRDLAARNILVGED 140

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 22/153 (14%)

Query: 109 PGDFEIFRVVGQGAFGKV---------FQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV 159
           P  ++    VG GA+G V          +V  K +       I+A +  R+  ++K    
Sbjct: 16  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK---- 71

Query: 160 DYMKAERDI-LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
            +MK E  I L  V  P       S +  + +YL+   +  G    ++ +     +D  +
Sbjct: 72  -HMKHENVIGLLDVFTP-----ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 123

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           F   +I+  + ++H   I+HRDLKP N+ ++ D
Sbjct: 124 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 156

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 11/140 (7%)

Query: 118 VGQGAFGKVFQVKKKGV---DDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH 174
           +G G FG V     KGV     G    + A+K ++++ I           E  ++ ++ H
Sbjct: 3   LGHGNFGSV----VKGVYLMKSGKEVEV-AVKTLKQEHI--AAGKKEFLREASVMAQLDH 55

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           P IV+L    +    L L+++    G L  +L ++        +    ++   +++L   
Sbjct: 56  PCIVRLIGVCKGEP-LMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK 114

Query: 235 GIVHRDLKPENILMDSDGHV 254
             VHRDL   N+L+ +    
Sbjct: 115 HFVHRDLAARNVLLVNRHQA 134

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 5/143 (3%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F   R +G G+FG V+  +     D  +  + A+K M             +  E   L K
Sbjct: 17  FSDLREIGHGSFGAVYFAR-----DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP  +Q R  +      +L++++  G         +   +E +    T   +  +++L
Sbjct: 72  LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 131

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H   ++HRD+K  NIL+   G V
Sbjct: 132 HSHNMIHRDVKAGNILLSEPGLV 154

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 16/139 (11%)

Query: 113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV 172
           ++ R +G G FG+V++    G+ +  +    A+K ++  T+  K+ +    AE  I+ K+
Sbjct: 9   QLLRKLGAGQFGEVWE----GLWNNTTP--VAVKTLKPGTMDPKDFL----AEAQIMKKL 58

Query: 173 THPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQG---IFREDQARFYTAEIVSAV 228
            HP ++QL Y+  T  + +Y++ + +  G L  +L       +          A++ S +
Sbjct: 59  RHPKLIQL-YAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDM-AAQVASGM 116

Query: 229 SHLHKCGIVHRDLKPENIL 247
           ++L     +HRDL   N+L
Sbjct: 117 AYLEAQNYIHRDLAARNVL 135

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 22/93 (23%), Positives = 45/93 (48%)

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L  + H  IV L     T+  L  + ++++     + +   G       R +  ++
Sbjct: 53  EASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQL 112

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  ++++H   I+HRDLKP+N+L+   G +  A
Sbjct: 113 LRGLAYIHGQHILHRDLKPQNLLISYLGELKLA 145

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 35/150 (23%)

Query: 118 VGQGAFGKVF---------QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           VG GA+G V          +V  K +       I+A +  R+ T++K    + +    D+
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDF-------INGGHLFFHLYRQGIFREDQARFYT 221
            T            S       YL++ +       I G              ED+ ++  
Sbjct: 83  FTSAV---------SGDEFQDFYLVMPYMQTDLQKIMGHP----------LSEDKVQYLV 123

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            +++  + ++H  GI+HRDLKP N+ ++ D
Sbjct: 124 YQMLCGLKYIHSAGIIHRDLKPGNLAVNED 153

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 33/261 (12%)

Query: 2   VSTSQKNLHSLLTTKLKKLTITPPSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLGDP 61
              S K  +S  T +    +      S    D        +    +++  A+T  +   P
Sbjct: 28  SGNSPKANNSASTGQTTSRSTNSARRSGSKRDRETATSTDSGRTKSHEGAATTKQATTTP 87

Query: 62  QVIHNRSHSFVGPSP-RYALSSSLPLQIQELEHEN---DAELEAESERKIGPGDFEIFRV 117
                 ++  V P P +  ++ +LP Q +E  H       +++  ++R      F+I  +
Sbjct: 88  T-----TNVEVAPPPKKKKVTYALPNQSREEGHFYVVLGEDIDVSTQR------FKILSL 136

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR---KDTIIKKNHVDYMKAERDILTKVTH 174
           +G+G FGKV +       D       A+K++R   K T   K  + +M+  R        
Sbjct: 137 LGEGTFGKVVEAW-----DRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRF 191

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV----SAVSH 230
           P +   RY FQ  +    I+    G  L   + + G F       + A+I+     A+ +
Sbjct: 192 PLMKIQRY-FQNETGHMCIVMPKYGPCLLDWIMKHGPFSHR----HLAQIIFQTGVALDY 246

Query: 231 LH-KCGIVHRDLKPENILMDS 250
            H +  ++H DLKPENILM++
Sbjct: 247 FHTELHLMHTDLKPENILMET 267

Length = 467

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 27/148 (18%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF 176
           +VG+      F V  +G D    + + A  VM  D    +    Y ++E   L    H  
Sbjct: 74  LVGRNPTTAAF-VATRGSDP--KEKVVAKFVMLND----ERQAAYARSELHCLAACDHFG 126

Query: 177 IVQLRYSFQTRSKLYLILDFINGG------------HLFFHLYRQGIFREDQARFYTAEI 224
           IV+    F++  KL LI+++ +GG            HL F  Y  G+       FY  +I
Sbjct: 127 IVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLL------FY--QI 178

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDG 252
           V A+  +H   ++HRDLK  NI +   G
Sbjct: 179 VLALDEVHSRKMMHRDLKSANIFLMPTG 206

Length = 478

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 30/137 (21%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           + +G G FG+V+          +     A+K M+  ++     V+   AE +++  + H 
Sbjct: 12  KKLGAGQFGEVWMATY------NKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHD 61

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF--YTAEIVSAVSHLHK 233
            +V+L ++  T+  +Y+I +F+  G L   L      ++   +   ++A+I   ++ + +
Sbjct: 62  KLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 120

Query: 234 CGIVHRDLKPENILMDS 250
              +HRDL+  NIL+ +
Sbjct: 121 RNYIHRDLRAANILVSA 137

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 5/146 (3%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F   R +G G+FG V+  +     D  ++ + A+K M             +  E   L +
Sbjct: 27  FTDLREIGHGSFGAVYFAR-----DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQR 81

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP  ++ +  +      +L++++  G         +   +E +    T   +  +++L
Sbjct: 82  IKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYL 141

Query: 232 HKCGIVHRDLKPENILMDSDGHVMAA 257
           H   ++HRD+K  NIL+   G V  A
Sbjct: 142 HSHNMIHRDIKAGNILLTEPGQVKLA 167

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 214 EDQ-ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           E Q  +++  +I+  + ++H  G+VHRDLKP NIL++ +
Sbjct: 106 EKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINEN 144

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 30/157 (19%)

Query: 109 PGDFEIFRVVGQGAFGKVF---------QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV 159
           P  ++    VG GA+G V          +V  K +       I+A +  R+  ++K    
Sbjct: 14  PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLK---- 69

Query: 160 DYMKAER-----DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRE 214
            +MK E      D+ T  T         S +  +++YL+ + +  G    ++ +     +
Sbjct: 70  -HMKHENVIGLLDVFTPAT---------SIENFNEVYLVTNLM--GADLNNIVKCQKLSD 117

Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +  +F   +++  + ++H  GI+HRDLKP N+ ++ D
Sbjct: 118 EHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 154

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF 176
           ++G+G FG+VF   K  + D       A+K  ++D + ++  + ++   R IL +  HP 
Sbjct: 2   LLGKGNFGEVF---KGTLKDKTP---VAVKTCKED-LPQELKIKFLSEAR-ILKQYDHPN 53

Query: 177 IVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCG 235
           IV+L      R  +Y++++ + GG     L + +   +  Q   +  +  + +++L    
Sbjct: 54  IVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN 113

Query: 236 IVHRDLKPENILM 248
            +HRDL   N L+
Sbjct: 114 CIHRDLAARNCLV 126

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 17/144 (11%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA----ERDILTK 171
             +G+G FG V++   KG      +   A+K  R            +K     E +IL +
Sbjct: 1   EKIGKGNFGDVYKGVLKG------NTEVAVKTCRSTL------PPDLKRKFLQEAEILKQ 48

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSH 230
             HP IV+L      +  +Y++++ + GG L   L ++       +    + +  + + +
Sbjct: 49  YDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEY 108

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           L     +HRDL   N L+  +  +
Sbjct: 109 LESKNCIHRDLAARNCLVGENNVL 132

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 41.2 bits (96), Expect = 3e-04
 Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 8/145 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE    +G G  G V +V+ K      S  I A K++  +  IK    + +  E  +L 
Sbjct: 6   DFERISELGAGNGGVVTKVQHK-----PSGLIMARKLIHLE--IKPAIRNQIIRELQVLH 58

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +   P+IV    +F +  ++ + ++ ++GG L   L       E+     +  ++  +++
Sbjct: 59  ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAY 118

Query: 231 L-HKCGIVHRDLKPENILMDSDGHV 254
           L  K  I+HRD+KP NIL++S G +
Sbjct: 119 LREKHQIMHRDVKPSNILVNSRGEI 143

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 14/37 (37%), Positives = 26/37 (70%)

Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           D  + +  +I+  + +LH  GI+HRD+KP N+L++S+
Sbjct: 103 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN 139

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 15/159 (9%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGV--DDGDSDGI-YAMKVMRKDTIIKKNH--V 159
           R +   +    +++G G FG V     KG+   +GDS  I  A+K ++  +  +      
Sbjct: 2   RILKETELRKLKLLGSGVFGTV----HKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEIT 57

Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQAR 218
           D+M A    +  + H +IV+L       + L L+      G L  H+   +      +  
Sbjct: 58  DHMLA----MGSLDHAYIVRL-LGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLL 112

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +  +I   + +L +  +VHR+L   NIL+ SD  V  A
Sbjct: 113 NWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIA 151

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
            YL++ F+  G     L +     ED+ +F   +++  + ++H  GI+HRDLKP N+ ++
Sbjct: 95  FYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN 152

Query: 250 SD 251
            D
Sbjct: 153 ED 154

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|236400 PRK09188, PRK09188, serine/threonine protein kinase; Provisional

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 8/63 (12%)

Query: 192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDL-KPENILMDS 250
           L+  +  G  L  HL R      D A F +A    A+  LH+ GI H DL KP+N LM  
Sbjct: 95  LVRGWTEGVPL--HLARP---HGDPAWFRSAH--RALRDLHRAGITHNDLAKPQNWLMGP 147

Query: 251 DGH 253
           DG 
Sbjct: 148 DGE 150

Length = 365

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 40.3 bits (94), Expect = 6e-04
 Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 118 VGQGAFGKVFQVKKKGVDD---------GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           +G+G FG+V   + +G+ +              + A+K++R D + K    D++K E  I
Sbjct: 13  LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLK-EIKI 70

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRE------------DQ 216
           ++++ +P I++L     +   L +I +++  G L   L ++ I                 
Sbjct: 71  MSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIAN 130

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
             +   +I S + +L     VHRDL   N L+ 
Sbjct: 131 LLYMAVQIASGMKYLASLNFVHRDLATRNCLVG 163

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 32/157 (20%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +E+ + +GQGA+G V   +     + ++  I      +K T +             IL K
Sbjct: 2   YELIKELGQGAYGIVCSARNAETSEEETVAI------KKITNVFSK---------KILAK 46

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDF-------INGGHLFFHLYR---QGIFREDQA---- 217
                +  LR+ F+    +  + D         N  +L+  L       I R  Q     
Sbjct: 47  RALRELKLLRH-FRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDA 105

Query: 218 --RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
             + +  +I+  + ++H   ++HRDLKP N+L+++D 
Sbjct: 106 HFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC 142

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHV 254
           + +   + +  E+         V A+++L +   I+HRD+KP NIL+D +G++
Sbjct: 95  YVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNI 147

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 40.4 bits (94), Expect = 7e-04
 Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 21/147 (14%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD-------TIIKKNHVDYMKAERDILT 170
           +G+G +  VF+ + K  ++     + A+K +R +       T I+         E  +L 
Sbjct: 14  LGEGTYATVFKGRSKLTEN-----LVALKEIRLEHEEGAPCTAIR---------EVSLLK 59

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + H  IV L     T   L L+ ++++     +      I      + +  +I+  +++
Sbjct: 60  DLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAY 119

Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
            H+  ++HRDLKP+N+L++  G +  A
Sbjct: 120 CHRRKVLHRDLKPQNLLINERGELKLA 146

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 39.9 bits (93), Expect = 7e-04
 Identities = 18/35 (51%), Positives = 22/35 (62%)

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +  +  LH   IVHRDLKPENIL+ S G V  A
Sbjct: 116 QFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLA 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 39.9 bits (93), Expect = 7e-04
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 26/154 (16%)

Query: 118 VGQGAFGKVFQVKKKGVDD-----------GDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +G+G FG+V   + +G++            G+   + A+K++R+D   K    D++K E 
Sbjct: 13  LGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLK-EI 70

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQA--------- 217
            I++++  P I++L     T   L +I +++  G L   L R    +E            
Sbjct: 71  KIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHE-PQEAAEKADVVTISY 129

Query: 218 ---RFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
               F   +I S + +L     VHRDL   N L+
Sbjct: 130 STLIFMATQIASGMKYLSSLNFVHRDLATRNCLV 163

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 15/38 (39%), Positives = 25/38 (65%)

Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            E    FYT +I+  + +LH   IVHRD+K +N+L+++
Sbjct: 106 NEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT 143

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 21/147 (14%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD-------TIIKKNHVDYMKAERDILT 170
           +G+G +  VF+ + K  ++     + A+K +R +       T I+         E  +L 
Sbjct: 13  LGEGTYATVFKGRSKLTEN-----LVALKEIRLEHEEGAPCTAIR---------EVSLLK 58

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + H  IV L     T   L L+ ++++     +      +      + +  +++  +S+
Sbjct: 59  NLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSY 118

Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
            HK  I+HRDLKP+N+L++  G +  A
Sbjct: 119 CHKRKILHRDLKPQNLLINEKGELKLA 145

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 12/145 (8%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKV---MRKDTIIKKNHVDYMKAERDILTKV 172
           + +G GAFGKV +    G+   D+     MKV   M K T    +  + + +E  I++ +
Sbjct: 41  KTLGAGAFGKVVEATAYGLSKSDA----VMKVAVKMLKPT-AHSSEREALMSELKIMSHL 95

Query: 173 -THPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEIVSAVS 229
             H  IV L  +      + +I ++   G L  F    R+     +    ++ ++   ++
Sbjct: 96  GNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMA 155

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
            L     +HRDL   N+L+ + G +
Sbjct: 156 FLASKNCIHRDLAARNVLL-THGKI 179

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D  + R +G+GAFGKVF  +   +       + A+K ++  T+  +   D+ + E ++LT
Sbjct: 6   DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK--DFQR-EAELLT 62

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAE--- 223
            + H  IV+          L ++ +++  G L   L   G    I  + Q R    E   
Sbjct: 63  NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 122

Query: 224 ---------IVSAVSHLHKCGIVHRDLKPENILM 248
                    I S + +L     VHRDL   N L+
Sbjct: 123 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLV 156

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 9/115 (7%)

Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH---LFFHLYRQGIFRED 215
           V +++ E  +     HP IV  R +F   ++L+++  F+  G    L    +  G+  E 
Sbjct: 43  VTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM-SEL 101

Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA-----HSLNSHNQ 265
              +    ++ A+ ++H  G VHR +K  +IL+  DG V  +      S+ +H Q
Sbjct: 102 AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 20/138 (14%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI 177
           +G+G FG+VF  + +       +   A+K  R +T+       +++  R IL + +HP I
Sbjct: 3   IGRGNFGEVFSGRLRA-----DNTPVAVKSCR-ETLPPDLKAKFLQEAR-ILKQYSHPNI 55

Query: 178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV-------SAVSH 230
           V+L      +  +Y++++ + GG            R +  R    E++       + + +
Sbjct: 56  VRLIGVCTQKQPIYIVMELVQGGDF------LTFLRTEGPRLKVKELIQMVENAAAGMEY 109

Query: 231 LHKCGIVHRDLKPENILM 248
           L     +HRDL   N L+
Sbjct: 110 LESKHCIHRDLAARNCLV 127

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 38.9 bits (90), Expect = 0.002
 Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 20/156 (12%)

Query: 118 VGQGAFGKVFQVKKKGVD-DGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THP 175
           +G+G FG+V   +  G+D D   + +     M KD   +K+  D + +E +++  +  H 
Sbjct: 23  LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSD-LVSEMEMMKMIGKHK 81

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHL---------YRQGIFR--EDQARFY---- 220
            I+ L  +      LY+I+++ + G+L  +L         Y   I R  ++Q  F     
Sbjct: 82  NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVS 141

Query: 221 -TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            T ++   + +L     +HRDL   N+L+ ++ +VM
Sbjct: 142 CTYQVARGMEYLASQKCIHRDLAARNVLV-TENNVM 176

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 10/38 (26%), Positives = 27/38 (71%)

Query: 214 EDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +D  +++  +++  + ++H   ++HRDLKP N+L++++
Sbjct: 107 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN 144

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 33/138 (23%), Positives = 74/138 (53%), Gaps = 13/138 (9%)

Query: 113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV 172
           ++ + +G G FG+V+     G  +G +    A+K +++ ++      +   AE +++ ++
Sbjct: 9   KLVKKLGAGQFGEVWM----GYYNGHTK--VAIKSLKQGSM----SPEAFLAEANLMKQL 58

Query: 173 THPFIVQLRYSFQTRSKLYLILDFI-NGGHLFFHLYRQGI-FREDQARFYTAEIVSAVSH 230
            HP +V+L Y+  T+  +Y+I +++ NG  + F    +GI    ++     A+I   ++ 
Sbjct: 59  QHPRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAF 117

Query: 231 LHKCGIVHRDLKPENILM 248
           + +   +HRDL+  NIL+
Sbjct: 118 IERKNYIHRDLRAANILV 135

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 13/37 (35%), Positives = 26/37 (70%)

Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +  +F+  +++ A+ ++H   + HRDLKP+NIL ++D
Sbjct: 103 EHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANAD 139

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 23/148 (15%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD-------TIIKKNHVDYMKAERDILT 170
           +G+G +  V++ + K  D+     + A+K +R +       T I+         E  +L 
Sbjct: 14  LGEGTYATVYKGRSKLTDN-----LVALKEIRLEHEEGAPCTAIR---------EVSLLK 59

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVS 229
            + H  IV L     T   L L+ ++++   L  +L   G        + +  +++  ++
Sbjct: 60  DLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLN 118

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  ++HRDLKP+N+L++  G +  A
Sbjct: 119 YCHRRKVLHRDLKPQNLLINERGELKLA 146

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQ-VKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           D  + R +G+G FG V+Q V     ++  +  +   K     ++ +K        E  I+
Sbjct: 7   DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREK-----FLQEAYIM 61

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF--YTAEIVSA 227
            +  HP IV+L     T + ++++++    G L  +L +   +  D A    Y+ ++ +A
Sbjct: 62  RQFDHPHIVKL-IGVITENPVWIVMELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTA 119

Query: 228 VSHLHKCGIVHRDLKPENILMDS 250
           +++L     VHRD+   N+L+ S
Sbjct: 120 LAYLESKRFVHRDIAARNVLVSS 142

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	99.98
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.98
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.98
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.98
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.98
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.98
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.98
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.97
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.97
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.97
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.97
PTZ00284	467	protein kinase; Provisional	99.97
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.97
PTZ00283	496	serine/threonine protein kinase; Provisional	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.97
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.97
KOG0584	632	consensus Serine/threonine protein kinase [General	99.97
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.97
PHA03211	461	serine/threonine kinase US3; Provisional	99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.97
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.97
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.97
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.97
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.97
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
KOG1152	772	consensus Signal transduction serine/threonine kin	99.97
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.97
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.97
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.97
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.97
PHA02988	283	hypothetical protein; Provisional	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.97
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.97
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.97
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.97
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.97
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.97
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.97
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.97
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.97
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.97
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.97
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.97
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.97
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.97
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.97
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.97
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.97
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.97
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.97
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.97
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.97
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.97
KOG3653	534	consensus Transforming growth factor beta/activin	99.97
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.97
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.97
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.97
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.96
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.96
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.96
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.96
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.96
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.96
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.96
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.96
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.96
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.96
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.96
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.96
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.96
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.96
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.96
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.96
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.96
PRK09188	365	serine/threonine protein kinase; Provisional	99.96
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.96
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.96
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.96
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.96
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.96
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.96
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.96
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.96
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.96
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.96
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.96
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.96
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.96
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.96
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.96
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.96
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.96
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.96
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.96
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.96
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.96
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.96
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.96
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.96
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.96
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.96
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.96
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.96
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.96
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.96
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.96
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.96
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.96
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.96
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.96
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.96
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.96
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.96
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.96
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.96
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.96
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.96
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.96
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.96
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.96
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.96
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.96
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.96
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
PLN00009	294	cyclin-dependent kinase A; Provisional	99.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.96
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.96
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.96
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.96
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.96
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.96
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.96
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.95
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.95
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.95
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.95
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.95
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.95
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.95
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.95
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.95
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.95
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.95
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.95
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.95
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.95
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.95
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.95
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.95
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.95
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.95
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.95
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.95
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.95
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.95
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.95
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.95
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.95
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.95
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.95
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.95
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.95
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.94
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.94
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.94
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.94
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.94
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.93
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.93
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.93
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.93
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.92
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.92
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.92
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.91
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.91
PRK10345	210	hypothetical protein; Provisional	99.91
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.91
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.91
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.91
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.9
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.9
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.89
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.89
smart00090	237	RIO RIO-like kinase.	99.89
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.88
PRK12274	218	serine/threonine protein kinase; Provisional	99.88
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.88
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.88
PRK14879	211	serine/threonine protein kinase; Provisional	99.87
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.87
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.86
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.86
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.86
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.85
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.85
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.81
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.8
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.8
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.79
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.79
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.78
PLN00181	793	protein SPA1-RELATED; Provisional	99.75
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.73
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.7
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.63
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.62
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.62
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.6
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.58
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.55
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.5
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.47
KOG3087	229	consensus Serine/threonine protein kinase [General	99.47
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.46
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.44
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.38
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.37
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.37
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.28
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.25
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.23
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.2
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.16
KOG1243	690	consensus Protein kinase [General function predict	99.12
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.09
PRK09902	216	hypothetical protein; Provisional	98.98
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.91
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.85
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.76
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.73
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.69
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.69
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.65
PF01636	239	APH: Phosphotransferase enzyme family This family	98.63
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.62
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.59
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.58
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.52
PLN02876	822	acyl-CoA dehydrogenase	98.4
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.37
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.37
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.14
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.11
PRK10593	297	hypothetical protein; Provisional	98.04
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.02
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.01
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.95
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.85
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.84
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.82
KOG2270	520	consensus Serine/threonine protein kinase involved	97.69
PRK05231	319	homoserine kinase; Provisional	97.67
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.49
COG4248	637	Uncharacterized protein with protein kinase and he	97.44
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.39
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.32
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.31
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.29
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.26
PLN02756	418	S-methyl-5-thioribose kinase	97.25
PLN02236	344	choline kinase	97.01
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.85
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.71
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	96.68
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.65
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.61
PRK12396	409	5-methylribose kinase; Reviewed	96.6
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.59
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.41
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.12
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	96.05
PRK11768	325	serine/threonine protein kinase; Provisional	95.84
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.78
PTZ00384	383	choline kinase; Provisional	95.69
PRK10271	188	thiK thiamine kinase; Provisional	94.3
COG2334	331	Putative homoserine kinase type II (protein kinase	94.29
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	93.86
PTZ00296	442	choline kinase; Provisional	93.76

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=9.9e-45  Score=306.10  Aligned_cols=170  Identities=54%  Similarity=0.887  Sum_probs=160.2

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      ...+++|+++++||+|+||+||+++.+     .++++||+|++++.........+....|..||..++||.||.++..|+
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~-----dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ   95 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKK-----DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ   95 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEc-----ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc
Confidence            345679999999999999999999987     578899999999998888878888999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      +...+|+|+||+.||.|+.++.+++.|++..++.++.+|+.||.|||++|||||||||+|||||.+|+++|+|||+|+..
T Consensus        96 t~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~  175 (357)
T KOG0598|consen   96 TEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKED  175 (357)
T ss_pred             cCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999865


Q ss_pred             ccc-------hhheeeccCccc
Q 023430          266 LCC-------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~-------~~~~~~~ape~~  280 (282)
                      ..+       .||+.|||||++
T Consensus       176 ~~~~~~t~tfcGT~eYmAPEil  197 (357)
T KOG0598|consen  176 LKDGDATRTFCGTPEYMAPEIL  197 (357)
T ss_pred             ccCCCccccccCCccccChHHH
Confidence            555       789999999986

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-44  Score=305.17  Aligned_cols=167  Identities=31%  Similarity=0.470  Sum_probs=150.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.+.||+|+||+||+|+++     ..+..||||.+.+... .+..++.+..|+.+|+.++|||||+++++....+
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~-----~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~   82 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHK-----KSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD   82 (429)
T ss_pred             cccceehhhccCcceEEEEEeEec-----cCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC
Confidence            468999999999999999999998     4567899999987754 3455667889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC------CcEEEEecCcc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD------GHVMAAHSLNS  262 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~------~~v~l~Dfg~s  262 (282)
                      .+|||||||.||+|..++.+++.+++..++.++.||+.||++||+++||||||||.||||+..      -.+||+|||+|
T Consensus        83 ~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA  162 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA  162 (429)
T ss_pred             eEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence            999999999999999999999999999999999999999999999999999999999999875      34899999999


Q ss_pred             cccccc------hhheeeccCcccc
Q 023430          263 HNQLCC------FFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~~~------~~~~~~~ape~~~  281 (282)
                      +..-..      .|++.|||||++.
T Consensus       163 R~L~~~~~a~tlcGSplYMAPEV~~  187 (429)
T KOG0595|consen  163 RFLQPGSMAETLCGSPLYMAPEVIM  187 (429)
T ss_pred             hhCCchhHHHHhhCCccccCHHHHH
Confidence            742211      8999999999984

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.9e-42  Score=292.64  Aligned_cols=167  Identities=28%  Similarity=0.422  Sum_probs=149.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh----hhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK----KNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      .+.|.+.+.||+|+||.|-+|..+     .+++.||||++.+.....    ......+.+|+++|++|+|||||+++++|
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~-----~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f  245 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEK-----KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF  245 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEc-----ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee
Confidence            457889999999999999999977     578899999998866433    22333467999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEEEecCc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMAAHSLN  261 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l~Dfg~  261 (282)
                      ...+..||||||++||+|++++..++.+.+...+.++.|++.|+.|||++||+||||||+|||+..+   ..+||+|||+
T Consensus       246 ~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  246 EVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             ecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence            9999999999999999999999999999999999999999999999999999999999999999866   7799999999


Q ss_pred             ccccccc------hhheeeccCccc
Q 023430          262 SHNQLCC------FFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~~------~~~~~~~ape~~  280 (282)
                      |+..-..      .||+.|.|||++
T Consensus       326 AK~~g~~sfm~TlCGTpsYvAPEVl  350 (475)
T KOG0615|consen  326 AKVSGEGSFMKTLCGTPSYVAPEVL  350 (475)
T ss_pred             hhccccceehhhhcCCccccChhhe
Confidence            9876332      889999999997

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-41  Score=284.83  Aligned_cols=168  Identities=27%  Similarity=0.390  Sum_probs=151.1

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++.+.+..||+|+.|+||+++++     .+++++|+|++..+  .+....+++.+|+++++.++||+||.+|++|..
T Consensus        76 i~~~dle~~~~lG~G~gG~V~kv~Hk-----~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~  148 (364)
T KOG0581|consen   76 ISLSDLERLGVLGSGNGGTVYKVRHK-----PTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYS  148 (364)
T ss_pred             cCHHHhhhhhhcccCCCcEEEEEEEc-----CCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence            44567888899999999999999998     56789999999544  245556778999999999999999999999999


Q ss_pred             CC-EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 RS-KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 ~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ++ .+.|+||||++|+|..++...+.++|.....++.++++||.|||+ ++||||||||+|||++..|+|||||||.|+.
T Consensus       149 ~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~  228 (364)
T KOG0581|consen  149 NGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGI  228 (364)
T ss_pred             CCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence            98 599999999999999999888999999999999999999999995 8999999999999999999999999999975


Q ss_pred             ccc---c--hhheeeccCcccc
Q 023430          265 QLC---C--FFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~---~--~~~~~~~ape~~~  281 (282)
                      .+.   +  .||..|||||.++
T Consensus       229 lvnS~a~tfvGT~~YMsPERi~  250 (364)
T KOG0581|consen  229 LVNSIANTFVGTSAYMSPERIS  250 (364)
T ss_pred             hhhhhcccccccccccChhhhc
Confidence            443   3  6799999999874

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.6e-41  Score=298.17  Aligned_cols=167  Identities=25%  Similarity=0.404  Sum_probs=157.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ..|+..+.||+|+|+.||.++..     .++..||+|++.+.........+.+.+||+|.+.|+|||||+++++|++.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~-----~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDL-----DTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEc-----CCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc
Confidence            36999999999999999999976     4678899999999888888888999999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-  268 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-  268 (282)
                      +|||+|+|..++|..++++.+.++|.+++.+++||+.||.|||+++|||||||..|+||+++.+|||+|||+|.....+ 
T Consensus        93 VYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~  172 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG  172 (592)
T ss_pred             eEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence            9999999999999999998899999999999999999999999999999999999999999999999999999865533 


Q ss_pred             ------hhheeeccCcccc
Q 023430          269 ------FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ------~~~~~~~ape~~~  281 (282)
                            .|||-|+|||+++
T Consensus       173 Erk~TlCGTPNYIAPEVl~  191 (592)
T KOG0575|consen  173 ERKKTLCGTPNYIAPEVLN  191 (592)
T ss_pred             cccceecCCCcccChhHhc
Confidence                  8999999999985

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-40  Score=270.16  Aligned_cols=170  Identities=37%  Similarity=0.634  Sum_probs=159.3

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ...++|++++.||.|+||.|.+++.+     .++..||+|++.+.....-.+++...+|..+|+.+.||.++++++.|.+
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k-----~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d  115 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREK-----HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD  115 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEc-----cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence            56789999999999999999999987     5678899999999888777888889999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+.+||||||.+||.|+.++++.++|++..++.++.||+.||+|||+++|++|||||+|||||.+|.+||+|||+|+...
T Consensus       116 ~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~  195 (355)
T KOG0616|consen  116 NSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS  195 (355)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997544


Q ss_pred             cc----hhheeeccCcccc
Q 023430          267 CC----FFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~~----~~~~~~~ape~~~  281 (282)
                      ..    .|||-|+|||++.
T Consensus       196 ~rT~TlCGTPeYLAPEii~  214 (355)
T KOG0616|consen  196 GRTWTLCGTPEYLAPEIIQ  214 (355)
T ss_pred             CcEEEecCCccccChHHhh
Confidence            43    8899999999873

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=6.1e-40  Score=288.02  Aligned_cols=154  Identities=44%  Similarity=0.820  Sum_probs=147.7

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      .++..++|+++.+||+|+||.||+|+.+     .++.+||+|++++.......+++.++.|..+|...++++||+||..|
T Consensus       136 ~r~~~~DFe~Lk~IgkGAfGeVrLarKk-----~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF  210 (550)
T KOG0605|consen  136 TRLSLDDFELLKVIGKGAFGEVRLARKK-----DTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF  210 (550)
T ss_pred             ccCCcccchhheeeccccceeEEEEEEc-----cCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe
Confidence            3577899999999999999999999987     57889999999999988999999999999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .+...+||||||++||++..+|.+.+.|++.+++.++.+++.|++.||..|+|||||||+|+|||..|++||+|||||.
T Consensus       211 QD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  211 QDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             cCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999984

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-39  Score=283.78  Aligned_cols=171  Identities=37%  Similarity=0.641  Sum_probs=157.6

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~  184 (282)
                      ...+.+|..++.||+|+|++|++|+.+     .+++.||||++.+.-+..+..++.+.+|-.+|..| .||.|++||..|
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~-----~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF  143 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREK-----ATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF  143 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeec-----CCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe
Confidence            456789999999999999999999977     47788999999998888888888999999999999 799999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .++..+|+|+||+++|+|.++|.+.+.|++..++.++.||+.||+|||++|||||||||+|||||.+|+++|+|||.++.
T Consensus       144 QD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~  223 (604)
T KOG0592|consen  144 QDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKI  223 (604)
T ss_pred             ecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998741


Q ss_pred             ----cc---------------cc-hhheeeccCcccc
Q 023430          265 ----QL---------------CC-FFFFLFLGGGVFN  281 (282)
Q Consensus       265 ----~~---------------~~-~~~~~~~ape~~~  281 (282)
                          +.               +. .||+.|.+||.|+
T Consensus       224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~  260 (604)
T KOG0592|consen  224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN  260 (604)
T ss_pred             CChhhccccCccCcccccCcccceeeeecccCHHHhc
Confidence                11               11 6799999999986

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4e-39  Score=282.69  Aligned_cols=170  Identities=25%  Similarity=0.425  Sum_probs=149.2

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      +.+...++.+.+.||+|+||+||++.|+++      ..||||++......... .+.|.+|+.+|.+++|||||+++|++
T Consensus        36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~------~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~  108 (362)
T KOG0192|consen   36 EEIDPDELPIEEVLGSGSFGTVYKGKWRGT------DVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGAC  108 (362)
T ss_pred             eecChHHhhhhhhcccCCceeEEEEEeCCc------eeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            344455667777899999999999999843      22999999876654444 67899999999999999999999999


Q ss_pred             EeCC-EEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEeeccCCCceEEcCCC-cEEEEec
Q 023430          185 QTRS-KLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCG-IVHRDLKPENILMDSDG-HVMAAHS  259 (282)
Q Consensus       185 ~~~~-~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~NILl~~~~-~v~l~Df  259 (282)
                      .... .++|||||+++|+|..++.+  +..++...++.|+.||++||.|||+++ |||||||++|||++.++ ++||+||
T Consensus       109 ~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DF  188 (362)
T KOG0192|consen  109 TSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADF  188 (362)
T ss_pred             cCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCC
Confidence            9887 79999999999999999987  577999999999999999999999999 99999999999999998 9999999


Q ss_pred             Cccccccc-------chhheeeccCcccc
Q 023430          260 LNSHNQLC-------CFFFFLFLGGGVFN  281 (282)
Q Consensus       260 g~s~~~~~-------~~~~~~~~ape~~~  281 (282)
                      |+++....       -.||..|||||+|.
T Consensus       189 Glsr~~~~~~~~~~~~~GT~~wMAPEv~~  217 (362)
T KOG0192|consen  189 GLSREKVISKTSMTSVAGTYRWMAPEVLR  217 (362)
T ss_pred             ccceeeccccccccCCCCCccccChhhhc
Confidence            99975443       27799999999985

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-38  Score=278.34  Aligned_cols=170  Identities=33%  Similarity=0.517  Sum_probs=150.6

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh--hHHHHHHHHHHHHHhcC-CCCeeeeeEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK--NHVDYMKAERDILTKVT-HPFIVQLRYS  183 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~nIv~l~~~  183 (282)
                      ...+.|.+.+.||+|+||+|+.|.+.     .++..||+|++.+......  ...+.+.+|+.+++.+. ||||++++++
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~-----~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev   88 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHR-----LTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEV   88 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeec-----cCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEE
Confidence            34578999999999999999999987     4557899998776532211  23456778999999999 9999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-CcEEEEecCcc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-GHVMAAHSLNS  262 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-~~v~l~Dfg~s  262 (282)
                      +.....+|+|||||.||+|++++...+.+.|.+++.+++|++.|++|||++||+||||||+|||++.+ +++||+|||+|
T Consensus        89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s  168 (370)
T KOG0583|consen   89 FATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLS  168 (370)
T ss_pred             EecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence            99999999999999999999999998999999999999999999999999999999999999999999 99999999999


Q ss_pred             ccc-ccc------hhheeeccCcccc
Q 023430          263 HNQ-LCC------FFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~-~~~------~~~~~~~ape~~~  281 (282)
                      ... ..+      .|++.|+|||+|.
T Consensus       169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~  194 (370)
T KOG0583|consen  169 AISPGEDGLLKTFCGSPAYAAPEVLS  194 (370)
T ss_pred             cccCCCCCcccCCCCCcccCCHHHhC
Confidence            854 121      7899999999985

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.3e-39  Score=275.14  Aligned_cols=167  Identities=31%  Similarity=0.481  Sum_probs=155.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      .+|++.+.||+|+||+|-+|...     ..++.||||.++++.+.++..+-.+++||+||..|+||||+.+|.+|+..+.
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~-----~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK  127 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEH-----KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK  127 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhc-----cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence            47999999999999999998854     5788999999999988888888889999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc-----
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN-----  264 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~-----  264 (282)
                      +.|||||..+|.|++|+.+.+.+++.+++.+++||+.|+.|||.++++|||||.+|||||.++++||+|||+|--     
T Consensus       128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k  207 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK  207 (668)
T ss_pred             EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999942     


Q ss_pred             cccc-hhheeeccCcccc
Q 023430          265 QLCC-FFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~~-~~~~~~~ape~~~  281 (282)
                      -+.. .|++.|..||++|
T Consensus       208 fLqTFCGSPLYASPEIvN  225 (668)
T KOG0611|consen  208 FLQTFCGSPLYASPEIVN  225 (668)
T ss_pred             HHHHhcCCcccCCccccC
Confidence            2222 6799999999986

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-38  Score=270.61  Aligned_cols=170  Identities=28%  Similarity=0.448  Sum_probs=142.3

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-----------hhHHHHHHHHHHHHHhcCC
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-----------KNHVDYMKAERDILTKVTH  174 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h  174 (282)
                      ....++|++++.||+|.||+|-+|+..     ..++.||||++.+.....           ....+.+++||.+|++|.|
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~-----~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H  167 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDE-----VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH  167 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeec-----CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC
Confidence            345689999999999999999999865     567899999998654322           1224578899999999999


Q ss_pred             CCeeeeeEEEEeC--CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC
Q 023430          175 PFIVQLRYSFQTR--SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       175 ~nIv~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~  252 (282)
                      +|||+|+.+..+.  +.+|||+|||..|.+...-.....+.+.+++.|+++++.||+|||.+|||||||||+|+||+++|
T Consensus       168 ~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g  247 (576)
T KOG0585|consen  168 PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG  247 (576)
T ss_pred             cCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC
Confidence            9999999998764  58999999999988744332223389999999999999999999999999999999999999999


Q ss_pred             cEEEEecCcccc-------ccc-----chhheeeccCccc
Q 023430          253 HVMAAHSLNSHN-------QLC-----CFFFFLFLGGGVF  280 (282)
Q Consensus       253 ~v~l~Dfg~s~~-------~~~-----~~~~~~~~ape~~  280 (282)
                      .|||+|||.|-.       ...     ..|||+|||||.+
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c  287 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELC  287 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhh
Confidence            999999998851       111     1789999999975

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-37  Score=278.24  Aligned_cols=170  Identities=35%  Similarity=0.654  Sum_probs=155.4

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~  183 (282)
                      ..+..++|.++++||+|+||+|+++..++     +++.||||+++++.+..++.++....|..|+.... ||.++.++.+
T Consensus       363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~-----~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~  437 (694)
T KOG0694|consen  363 GPLTLDDFRLLAVLGRGSFGKVLLAELKG-----TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC  437 (694)
T ss_pred             CcccccceEEEEEeccCcCceEEEEEEcC-----CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc
Confidence            46778899999999999999999999884     56689999999999999999999999999998876 9999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      |.+..++|+||||+.||++. ++...+.|++..++.|++.|+.||+|||++|||+||||.+|||||.+|++||+|||+|+
T Consensus       438 fQT~~~l~fvmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcK  516 (694)
T KOG0694|consen  438 FQTKEHLFFVMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCK  516 (694)
T ss_pred             cccCCeEEEEEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccccc
Confidence            99999999999999999943 33345779999999999999999999999999999999999999999999999999998


Q ss_pred             ccccc-------hhheeeccCccc
Q 023430          264 NQLCC-------FFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~~~-------~~~~~~~ape~~  280 (282)
                      .....       .||+-|||||++
T Consensus       517 e~m~~g~~TsTfCGTpey~aPEil  540 (694)
T KOG0694|consen  517 EGMGQGDRTSTFCGTPEFLAPEVL  540 (694)
T ss_pred             ccCCCCCccccccCChhhcChhhh
Confidence            76632       789999999997

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-37  Score=272.70  Aligned_cols=169  Identities=24%  Similarity=0.301  Sum_probs=150.8

Q ss_pred             hhhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeee
Q 023430          102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLR  181 (282)
Q Consensus       102 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~  181 (282)
                      ..+|.+..+++.+.+.||+|.||+||+|+|.+        .||||+++.+.. ..+.++.|++|+.++++-+|.||+-+.
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--------dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTRH~NIlLFM  454 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--------DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKTRHENILLFM  454 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeeccccc--------ceEEEEEecCCC-CHHHHHHHHHHHHHHhhcchhhheeee
Confidence            35677888899999999999999999999985        399999988764 445889999999999999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      |++..... .||+.||+|.+|+.+++-. ..|.....+.|++||++||.|||.++|||||||..||+|.++++|||.|||
T Consensus       455 G~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFG  533 (678)
T KOG0193|consen  455 GACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFG  533 (678)
T ss_pred             hhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEeccc
Confidence            99988776 9999999999999999754 458889999999999999999999999999999999999999999999999


Q ss_pred             ccc---------ccccchhheeeccCccc
Q 023430          261 NSH---------NQLCCFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~---------~~~~~~~~~~~~ape~~  280 (282)
                      ++.         ....-.|...|||||++
T Consensus       534 Latvk~~w~g~~q~~qp~gsilwmAPEvI  562 (678)
T KOG0193|consen  534 LATVKTRWSGEQQLEQPHGSLLWMAPEVI  562 (678)
T ss_pred             ceeeeeeeccccccCCCccchhhhcHHHH
Confidence            984         23334889999999985

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-38  Score=260.06  Aligned_cols=165  Identities=22%  Similarity=0.357  Sum_probs=143.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeE-EEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRY-SFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~-~~~~~~  188 (282)
                      .+|+++++||+|+||.||++.+.     .++..+|.|.+.-.. .+....+.+..|+.+|++|+|||||++++ .|..++
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~-----~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~   92 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCL-----LDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN   92 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeec-----cCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence            47999999999999999999987     467889999998544 45566777889999999999999999998 565555


Q ss_pred             E-EEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH--CC--CEeeccCCCceEEcCCCcEEEEec
Q 023430          189 K-LYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHK--CG--IVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       189 ~-~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~--~~--iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                      . ++||||||.+|+|.+++..    ++.+++..++.++.|++.||..+|.  .+  |+||||||.||+|+.+|.|||.||
T Consensus        93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf  172 (375)
T KOG0591|consen   93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF  172 (375)
T ss_pred             hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence            5 9999999999999988864    3568999999999999999999998  44  999999999999999999999999


Q ss_pred             Ccccccccc-------hhheeeccCccc
Q 023430          260 LNSHNQLCC-------FFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~~-------~~~~~~~ape~~  280 (282)
                      |+++..-.+       .|||-||+||.+
T Consensus       173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i  200 (375)
T KOG0591|consen  173 GLGRFLSSKTTFAHSLVGTPYYMSPERI  200 (375)
T ss_pred             hhHhHhcchhHHHHhhcCCCcccCHHHH
Confidence            999743222       789999999986

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-36  Score=259.07  Aligned_cols=170  Identities=27%  Similarity=0.403  Sum_probs=151.0

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+....++|++.++||.|..++||+|++..     .+..||||++..+....  .++.+++|+..|+.++||||++++..
T Consensus        20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p-----~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~s   92 (516)
T KOG0582|consen   20 EFPLNAKDYELQEVIGVGASAVVYLARCIP-----TNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCS   92 (516)
T ss_pred             cCCCCccceeEEEEEeccceeEeeeeeecc-----cCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEE
Confidence            345567799999999999999999999884     45789999998876543  37889999999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      |..+..+|+||.||.+|++.+++...  ..+.|..+..+++++++||.|||.+|-||||||+.||||+.+|.|+|+|||.
T Consensus        93 Fvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgv  172 (516)
T KOG0582|consen   93 FVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGV  172 (516)
T ss_pred             EEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCcee
Confidence            99999999999999999999999764  3489999999999999999999999999999999999999999999999997


Q ss_pred             ccc-------cccc----hhheeeccCccc
Q 023430          262 SHN-------QLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~-------~~~~----~~~~~~~ape~~  280 (282)
                      +..       +..+    .|++.|||||++
T Consensus       173 sa~l~~~G~R~~~rf~tfvgtp~wmAPEvl  202 (516)
T KOG0582|consen  173 SASLFDSGDRQVTRFNTFVGTPCWMAPEVL  202 (516)
T ss_pred             eeeecccCceeeEeeccccCcccccChHHh
Confidence            742       2222    679999999984

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7e-37  Score=266.96  Aligned_cols=165  Identities=24%  Similarity=0.401  Sum_probs=142.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .+.|+.+++||+|+||.||+|++.     .++++||+|+++.+.. +........+||.||++|+||||++|.+..... 
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~-----~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~  189 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDL-----ETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL  189 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeec-----ccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecC
Confidence            356899999999999999999976     5788999999987653 344556678999999999999999999988776 


Q ss_pred             -CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 -SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 -~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                       +.+|||+|||+. +|.-++... -.|++.++..++.||+.||+|||.+||+|||||.+|||||.+|.+||+|||+|+..
T Consensus       190 ~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y  268 (560)
T KOG0600|consen  190 SGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFY  268 (560)
T ss_pred             CceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeec
Confidence             689999999987 676666553 35999999999999999999999999999999999999999999999999999722


Q ss_pred             ccc--------hhheeeccCccc
Q 023430          266 LCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~--------~~~~~~~ape~~  280 (282)
                      ..+        .-|.-|-+||.|
T Consensus       269 ~~~~~~~~T~rVvTLWYRpPELL  291 (560)
T KOG0600|consen  269 TPSGSAPYTSRVVTLWYRPPELL  291 (560)
T ss_pred             cCCCCcccccceEEeeccChHHh
Confidence            211        448889999976

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=7.6e-36  Score=265.76  Aligned_cols=149  Identities=42%  Similarity=0.779  Sum_probs=137.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||+||+|+++     .+++.||+|++.+.........+.+.+|+.+++.++|+||+++++.+.+...
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~   75 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKK-----DTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLN   75 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCe
Confidence            47999999999999999999876     4567899999987655455556678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +|+||||+++|+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.++|+|||+++
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~  149 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCT  149 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcc
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=3.6e-37  Score=271.83  Aligned_cols=164  Identities=27%  Similarity=0.474  Sum_probs=149.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|.+.+.||+|+||.||+|+.+     .+.+.||+|.+.+.... ...++.+++|++|++.++|||||.++++|++..+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK-----~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~   75 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRK-----YTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLKHPNIVEMLESFETSAH   75 (808)
T ss_pred             cchhHHHHhcCCccceeeecccc-----cceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccce
Confidence            47888999999999999999987     45678999999877643 3446678999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-  268 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-  268 (282)
                      +|+|.|||.| +|+.++...+.++|+.++.++.+++.||.|||+.+|+|||+||.|||++..|.+|+||||+++..-.. 
T Consensus        76 ~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   76 LWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             EEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            9999999988 99999999999999999999999999999999999999999999999999999999999999753333 


Q ss_pred             ------hhheeeccCccc
Q 023430          269 ------FFFFLFLGGGVF  280 (282)
Q Consensus       269 ------~~~~~~~ape~~  280 (282)
                            -|||.|||||.+
T Consensus       155 ~vltsikGtPlYmAPElv  172 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELV  172 (808)
T ss_pred             eeeeeccCcccccCHHHH
Confidence                  789999999975

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.6e-37  Score=273.41  Aligned_cols=167  Identities=26%  Similarity=0.418  Sum_probs=154.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .+-|++++.||.|+-|.|.+|++.     .+|+.+|||++.+...........+.+||.+|+.+.||||+++|++|.+..
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~-----~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~   85 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHA-----ETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ   85 (786)
T ss_pred             ccceeccccccCCCCceehhhhcc-----cccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc
Confidence            467999999999999999999987     567889999998875455555677899999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC  268 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~  268 (282)
                      ++|+|.||++||.|++++.+++.+++.++..+++||+.|+.|||..+|+||||||+|+|||.++++||+|||.|..+..+
T Consensus        86 ~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen   86 HLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             eEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999866655


Q ss_pred             ------hhheeeccCccc
Q 023430          269 ------FFFFLFLGGGVF  280 (282)
Q Consensus       269 ------~~~~~~~ape~~  280 (282)
                            +|.++|++||++
T Consensus       166 klLeTSCGSPHYA~PEIV  183 (786)
T KOG0588|consen  166 KLLETSCGSPHYAAPEIV  183 (786)
T ss_pred             ccccccCCCcccCCchhh
Confidence                  899999999986

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-36  Score=256.81  Aligned_cols=164  Identities=27%  Similarity=0.416  Sum_probs=142.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS-  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-  188 (282)
                      .+|...+.||+|+||.||++...     .++..+|||.+.....   ...+.+.+|+.+|+.++|||||+++|...... 
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~-----~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~   88 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNK-----KTGELMAVKSVELEDS---PTSESLEREIRILSRLNHPNIVQYYGSSSSREN   88 (313)
T ss_pred             chhhhhccccCccceEEEEEEec-----CCCcceeeeeeecccc---hhHHHHHHHHHHHHhCCCCCEEeeCCccccccC
Confidence            45777889999999999999977     3467899999876521   11567889999999999999999999754444 


Q ss_pred             -EEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCccccc
Q 023430          189 -KLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 -~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~~~  265 (282)
                       .++++|||+++|+|.+++.+.+ .+++..++.+.+||++||.|||++|||||||||+|||++. ++.+||+|||+++..
T Consensus        89 ~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~  168 (313)
T KOG0198|consen   89 DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKL  168 (313)
T ss_pred             eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence             6999999999999999999876 7999999999999999999999999999999999999999 799999999988743


Q ss_pred             cc----------chhheeeccCcccc
Q 023430          266 LC----------CFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~----------~~~~~~~~ape~~~  281 (282)
                      ..          --||+.|||||++.
T Consensus       169 ~~~~~~~~~~~~~~Gtp~~maPEvi~  194 (313)
T KOG0198|consen  169 ESKGTKSDSELSVQGTPNYMAPEVIR  194 (313)
T ss_pred             ccccccccccccccCCccccCchhhc
Confidence            31          16799999999874

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.3e-37  Score=246.39  Aligned_cols=172  Identities=31%  Similarity=0.447  Sum_probs=156.0

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.+.||+|.||.||+|+.+     .+.-+||+|++.+..+......+.+++|++|-..|+||||+++|++|
T Consensus        17 ~~~~l~dfeigr~LgkgkFG~vYlarek-----ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f   91 (281)
T KOG0580|consen   17 KTWTLDDFEIGRPLGKGKFGNVYLAREK-----KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF   91 (281)
T ss_pred             cccchhhccccccccCCccccEeEeeec-----cCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe
Confidence            3456789999999999999999999977     67889999999988776666667899999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLY--RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .+...+|+++||...|+++..+.  +...+++..+..++.|++.||.|+|.++||||||||+|+|++.+|.+||+|||.|
T Consensus        92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGws  171 (281)
T KOG0580|consen   92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWS  171 (281)
T ss_pred             eccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCce
Confidence            99999999999999999999998  5567999999999999999999999999999999999999999999999999988


Q ss_pred             cccccc-----hhheeeccCcccc
Q 023430          263 HNQLCC-----FFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~~~-----~~~~~~~ape~~~  281 (282)
                      -..-+.     .||.-|.+||..+
T Consensus       172 V~~p~~kR~tlcgt~dyl~pEmv~  195 (281)
T KOG0580|consen  172 VHAPSNKRKTLCGTLDYLPPEMVE  195 (281)
T ss_pred             eecCCCCceeeecccccCCHhhcC
Confidence            543333     8999999999763

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=264.90  Aligned_cols=149  Identities=46%  Similarity=0.773  Sum_probs=136.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++++.||+|+||.||++.++     ..++.||||++.+.........+.+.+|+.+++.++||||+++++++.+...
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~   75 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKK-----DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQY   75 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Confidence            37999999999999999999876     4567899999977654455566778899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +|+||||+++|+|..++...+.+++..++.++.|++.||+|||++||+||||||+|||++.++.++|+|||+++
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=263.69  Aligned_cols=149  Identities=43%  Similarity=0.807  Sum_probs=137.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|+++     ..++.||||++.............+.+|+.+|+.++|+||+++++++...+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~   75 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKK-----DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENY   75 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCe
Confidence            47999999999999999999977     3567899999987654445556678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +|+||||+++|+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.++|+|||++.
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  149 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT  149 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccce
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999985

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.6e-35  Score=263.95  Aligned_cols=148  Identities=42%  Similarity=0.738  Sum_probs=136.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|++++.||+|+||+||+|+++     .++..||+|++.+.........+.+.+|+.+++.++|+||+++++++.+.+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKV-----DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEE
Confidence            6899999999999999999976     45678999999876655556667789999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      |+||||+++|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~  149 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCT  149 (381)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence            9999999999999999888889999999999999999999999999999999999999999999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-35  Score=259.42  Aligned_cols=170  Identities=38%  Similarity=0.611  Sum_probs=151.6

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||+|+++     ..++.||+|++.+.........+.+.+|+.+++.++||||+++++++..
T Consensus        15 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   89 (329)
T PTZ00263         15 WKLSDFEMGETLGTGSFGRVRIAKHK-----GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD   89 (329)
T ss_pred             CCchheEEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc
Confidence            44578999999999999999999987     3567899999987654444556678899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+..|+||||+.+|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus        90 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  169 (329)
T PTZ00263         90 ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP  169 (329)
T ss_pred             CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence            99999999999999999999888889999999999999999999999999999999999999999999999999987432


Q ss_pred             c----chhheeeccCcccc
Q 023430          267 C----CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~----~~~~~~~~ape~~~  281 (282)
                      .    -.|++.|||||++.
T Consensus       170 ~~~~~~~gt~~y~aPE~~~  188 (329)
T PTZ00263        170 DRTFTLCGTPEYLAPEVIQ  188 (329)
T ss_pred             CCcceecCChhhcCHHHHc
Confidence            2    25799999999873

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-37  Score=256.58  Aligned_cols=174  Identities=40%  Similarity=0.707  Sum_probs=162.8

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeE
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRY  182 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~  182 (282)
                      ...++..++|+.+++||+|+||+|.+|+.+     .+++.||+|+++++.+..++.+..-..|-++|+.++||.+..+..
T Consensus       161 ~~~kvTm~dFdfLKvLGkGTFGKVIL~rEK-----at~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKY  235 (516)
T KOG0690|consen  161 RKNKVTMEDFDFLKVLGKGTFGKVILCREK-----ATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKY  235 (516)
T ss_pred             ccceeccchhhHHHHhcCCccceEEEEeec-----ccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhh
Confidence            345567789999999999999999999976     678899999999999888888888888999999999999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .|++.+.+|+||||..||.|+.++.+...+++..++.+...|+.||.|||+++||.||||.+|+|+|.+|++||+|||+|
T Consensus       236 sFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLC  315 (516)
T KOG0690|consen  236 SFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLC  315 (516)
T ss_pred             hhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccc
Confidence            99999999999999999999999999889999999999999999999999999999999999999999999999999999


Q ss_pred             cccccc-------hhheeeccCcccc
Q 023430          263 HNQLCC-------FFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~~~-------~~~~~~~ape~~~  281 (282)
                      +..+.+       .|||.|+|||+++
T Consensus       316 KE~I~~g~t~kTFCGTPEYLAPEVle  341 (516)
T KOG0690|consen  316 KEEIKYGDTTKTFCGTPEYLAPEVLE  341 (516)
T ss_pred             hhcccccceeccccCChhhcCchhhc
Confidence            987766       7899999999983

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.4e-36  Score=250.31  Aligned_cols=165  Identities=22%  Similarity=0.310  Sum_probs=139.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      +.|+.+.++|+|+||+||+|+++     .++++||||++.... .++...+-..+||++|++++|+|+|.++++|.....
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk-----~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrk   75 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNK-----DTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRK   75 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccC-----CcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcce
Confidence            46888999999999999999988     578899999986543 223333445689999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      +++|+|||+..-|.++-.-...++...+..++.|++.|+.|||++++|||||||+||||..+|.+||||||+|+...+  
T Consensus        76 lhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen   76 LHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG  155 (396)
T ss_pred             eEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence            999999998755544333345589999999999999999999999999999999999999999999999999986542  


Q ss_pred             ---chh--heeeccCccc
Q 023430          268 ---CFF--FFLFLGGGVF  280 (282)
Q Consensus       268 ---~~~--~~~~~ape~~  280 (282)
                         .+|  |.-|-|||.+
T Consensus       156 d~YTDYVATRWYRaPELL  173 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELL  173 (396)
T ss_pred             chhhhhhhhhhccChhhh
Confidence               233  8899999976

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=4.3e-35  Score=262.11  Aligned_cols=149  Identities=44%  Similarity=0.793  Sum_probs=136.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++++.||+|+||.||+|+.+     ..++.||+|++.+.........+.+.+|+.+|+.++|+||+++++.+..++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~   75 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKV-----DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDN   75 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEEC-----CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCE
Confidence            37999999999999999999977     4577899999976654444555678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +|+||||+++|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+|.
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=4.4e-35  Score=262.59  Aligned_cols=148  Identities=45%  Similarity=0.790  Sum_probs=136.3

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|+++++||+|+||.||+|+.+     ..++.||+|++.+.........+.+.+|+.+++.++|+||+++++.+.+.+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKV-----DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEE
Confidence            5899999999999999999976     45678999999876554555667788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      |+|||||++|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||++.
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence            9999999999999999888889999999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=3.6e-35  Score=259.11  Aligned_cols=173  Identities=35%  Similarity=0.512  Sum_probs=151.9

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      ...+..++|++.+.||+|+||.||+|.++..    ....||+|++.+.........+.+.+|+.+++.++||||++++++
T Consensus        24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~   99 (340)
T PTZ00426         24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNE----DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGS   99 (340)
T ss_pred             CCCCChhhcEEEEEEeecCCeEEEEEEEECC----CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEE
Confidence            3445667899999999999999999987632    235799999977654445556678899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +...+.+|+||||+++|+|..++.+.+.+++..+..++.|++.||.|||++||+||||||+|||++.+|.++|+|||++.
T Consensus       100 ~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~  179 (340)
T PTZ00426        100 FKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAK  179 (340)
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence            99999999999999999999999888889999999999999999999999999999999999999999999999999986


Q ss_pred             ccc----cchhheeeccCccc
Q 023430          264 NQL----CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~----~~~~~~~~~ape~~  280 (282)
                      ...    ...|++.|||||++
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~  200 (340)
T PTZ00426        180 VVDTRTYTLCGTPEYIAPEIL  200 (340)
T ss_pred             ecCCCcceecCChhhcCHHHH
Confidence            422    22579999999986

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=7.2e-35  Score=255.52  Aligned_cols=161  Identities=42%  Similarity=0.744  Sum_probs=143.2

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      +.||+|+||.||+|+++     ..++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREK-----ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEe
Confidence            36999999999999976     4567899999987654445555667889999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------c
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------C  268 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------~  268 (282)
                      |+++++|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....       .
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~  155 (323)
T cd05571          76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF  155 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence            999999999998888899999999999999999999999999999999999999999999999999874321       1


Q ss_pred             hhheeeccCcccc
Q 023430          269 FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ~~~~~~~ape~~~  281 (282)
                      .|++.|||||.+.
T Consensus       156 ~gt~~y~aPE~~~  168 (323)
T cd05571         156 CGTPEYLAPEVLE  168 (323)
T ss_pred             ecCccccChhhhc
Confidence            4799999999873

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=8.7e-35  Score=258.68  Aligned_cols=149  Identities=42%  Similarity=0.782  Sum_probs=137.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+++++     ..+..||+|++...........+.+.+|+.++..++|+||+++++.+...+.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   75 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKK-----DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRN   75 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            47999999999999999999977     4567899999987655455566778899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +|+||||+++|+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.++|+|||++.
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~  149 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCT  149 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.2e-35  Score=240.81  Aligned_cols=164  Identities=22%  Similarity=0.351  Sum_probs=141.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      .+|..+++||+|.||.||+|++.     .+++.||||+++.....+..... ..+||.+|+.++|+||+.++++|...+.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~-----~t~~~VAIKKIkl~~~kdGi~~t-alREIK~Lqel~h~nIi~LiD~F~~~~~   75 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDT-----ETGKRVAIKKIKLGNAKDGINRT-ALREIKLLQELKHPNIIELIDVFPHKSN   75 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEec-----CCCcEEEEEEeeccccccCccHH-HHHHHHHHHHccCcchhhhhhhccCCCc
Confidence            46888899999999999999976     57788999999876543333333 5579999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc----
Q 023430          190 LYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN----  264 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~----  264 (282)
                      +.||+||++. +|...++... .+...++..|+.++++||+|||++.|+||||||.|+|++.+|.+||+|||+++.    
T Consensus        76 l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   76 LSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             eEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence            9999999976 7887776543 488999999999999999999999999999999999999999999999999963    


Q ss_pred             ---cccchhheeeccCccc
Q 023430          265 ---QLCCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ---~~~~~~~~~~~ape~~  280 (282)
                         +..+..|.-|-|||.|
T Consensus       155 ~~~~~~~V~TRWYRAPELL  173 (318)
T KOG0659|consen  155 NRIQTHQVVTRWYRAPELL  173 (318)
T ss_pred             CcccccceeeeeccChHHh
Confidence               3334568889999965

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-35  Score=253.53  Aligned_cols=167  Identities=34%  Similarity=0.568  Sum_probs=148.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|.++     ..++.||+|++...........+.+.+|+.+++.++||||+++++.+.+...
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   75 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDR-----ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRF   75 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEc-----CCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCe
Confidence            37999999999999999999976     3567899999976544333445668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      +|+||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.+|.++|+|||++.....  
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~  155 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT  155 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence            999999999999999998888899999999999999999999999999999999999999999999999999874332  


Q ss_pred             --chhheeeccCcccc
Q 023430          268 --CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 --~~~~~~~~ape~~~  281 (282)
                        ..|++.|+|||.+.
T Consensus       156 ~~~~gt~~y~aPE~~~  171 (291)
T cd05612         156 WTLCGTPEYLAPEVIQ  171 (291)
T ss_pred             ccccCChhhcCHHHHc
Confidence              25799999999863

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-34  Score=255.02  Aligned_cols=167  Identities=40%  Similarity=0.642  Sum_probs=149.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|+++     ..+..||+|++.+.........+.+.+|+.+++.++|+||+++++++...+.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~   75 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKK-----DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEY   75 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCE
Confidence            47999999999999999999976     3567899999987654444455678889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      .|+||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....  
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~  155 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYA  155 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccccc
Confidence            999999999999999998888899999999999999999999999999999999999999999999999999974322  


Q ss_pred             --chhheeeccCcccc
Q 023430          268 --CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 --~~~~~~~~ape~~~  281 (282)
                        ..|++.|||||++.
T Consensus       156 ~~~~gt~~y~aPE~~~  171 (333)
T cd05600         156 NSVVGSPDYMAPEVLR  171 (333)
T ss_pred             CCcccCccccChhHhc
Confidence              36799999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.3e-34  Score=258.34  Aligned_cols=171  Identities=33%  Similarity=0.585  Sum_probs=149.1

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      ......++|++.+.||+|+||.||+++++     ..++.+|+|++.+.........+.+.+|+.+++.++||||++++++
T Consensus        37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~  111 (370)
T cd05621          37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHK-----SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCA  111 (370)
T ss_pred             hcCCCHHHCeEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34556678999999999999999999987     4567899999976544344445567889999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +..+..+|+||||+++|+|..++... .+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|.
T Consensus       112 ~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~  190 (370)
T cd05621         112 FQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM  190 (370)
T ss_pred             EEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccce
Confidence            99999999999999999999988654 58999999999999999999999999999999999999999999999999986


Q ss_pred             ccc--------cchhheeeccCccc
Q 023430          264 NQL--------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~--------~~~~~~~~~ape~~  280 (282)
                      ...        ...|++.|||||++
T Consensus       191 ~~~~~~~~~~~~~~gt~~Y~aPE~~  215 (370)
T cd05621         191 KMDETGMVRCDTAVGTPDYISPEVL  215 (370)
T ss_pred             ecccCCceecccCCCCcccCCHHHH
Confidence            421        12579999999986

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.9e-36  Score=262.11  Aligned_cols=166  Identities=22%  Similarity=0.323  Sum_probs=143.4

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +....+.+++.||+|.||.||.|.+++.      ..||+|.++......    +.|.+|+++|++|+|+|||++++++..
T Consensus       203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~------~~vavk~ik~~~m~~----~~f~~Ea~iMk~L~H~~lV~l~gV~~~  272 (468)
T KOG0197|consen  203 IPREELKLIRELGSGQFGEVWLGKWNGS------TKVAVKTIKEGSMSP----EAFLREAQIMKKLRHEKLVKLYGVCTK  272 (468)
T ss_pred             ecHHHHHHHHHhcCCccceEEEEEEcCC------CcccceEEeccccCh----hHHHHHHHHHHhCcccCeEEEEEEEec
Confidence            3344566678999999999999999853      248899887653322    347789999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      +..+|||||||+.|+|.+++..  ...+...+.+.++.|||+||+||+++++|||||..+||||++++.|||+|||+++.
T Consensus       273 ~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~  352 (468)
T KOG0197|consen  273 QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARL  352 (468)
T ss_pred             CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccc
Confidence            8899999999999999999986  45688999999999999999999999999999999999999999999999999995


Q ss_pred             cccchh--------heeeccCccccC
Q 023430          265 QLCCFF--------FFLFLGGGVFNF  282 (282)
Q Consensus       265 ~~~~~~--------~~~~~ape~~~~  282 (282)
                      ...+-|        -..|.|||+|+|
T Consensus       353 ~~d~~Y~~~~~~kfPIkWtAPEa~~~  378 (468)
T KOG0197|consen  353 IGDDEYTASEGGKFPIKWTAPEALNY  378 (468)
T ss_pred             cCCCceeecCCCCCCceecCHHHHhh
Confidence            444422        568999999976

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-34  Score=252.71  Aligned_cols=166  Identities=37%  Similarity=0.670  Sum_probs=146.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+++.+     ..++.||+|++.+.........+.+.+|+.+++.++|+||+++++++...+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   75 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMK-----NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENN   75 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCe
Confidence            47999999999999999999977     4567899999986554445556678889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      +|+||||+++|+|..++.+ ...+++..++.++.||+.||.|||+++|+||||||+|||++.++.++|+|||++..... 
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD  155 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence            9999999999999999976 45689999999999999999999999999999999999999999999999999853211 


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..|++.|||||++
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~  175 (331)
T cd05597         156 GTVQSNVAVGTPDYISPEIL  175 (331)
T ss_pred             CCccccceeccccccCHHHH
Confidence                   2579999999986

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=3.6e-34  Score=251.97  Aligned_cols=167  Identities=36%  Similarity=0.620  Sum_probs=146.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+++++     ..++.||+|++.+.........+.+.+|+.++..++|+||+++++++...+.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMK-----HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            47999999999999999999876     4567899999976544444455667889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .|+||||++||+|..++.+ ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            9999999999999999976 46789999999999999999999999999999999999999999999999999853221 


Q ss_pred             -------chhheeeccCcccc
Q 023430          268 -------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 -------~~~~~~~~ape~~~  281 (282)
                             ..|++.|||||+++
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05624         156 GTVQSSVAVGTPDYISPEILQ  176 (331)
T ss_pred             CceeeccccCCcccCCHHHHh
Confidence                   25799999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-36  Score=260.44  Aligned_cols=164  Identities=26%  Similarity=0.439  Sum_probs=142.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~  187 (282)
                      .++|.++++||.|+||.||+|+.+     ..+..||||.+++.... +++.- -.||+..|++|+ |||||++.+++.+.
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~-----~~~~~VAIK~MK~Kf~s-~ee~~-nLREvksL~kln~hpniikL~Evi~d~   81 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSK-----ETGELVAIKKMKKKFYS-WEECM-NLREVKSLRKLNPHPNIIKLKEVIRDN   81 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeec-----CCCceeeHHHHHhhhcc-HHHHH-HHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence            467999999999999999999977     46677999999876543 33222 246999999999 99999999999988


Q ss_pred             C-EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 S-KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 ~-~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      + .+|+|||||+. +|+++++.+ ..|++..++.|+.||++||+|+|.+|+.|||+||+|||+.....|||+|||+|+..
T Consensus        82 ~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   82 DRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             CceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccc
Confidence            8 99999999975 789888764 55999999999999999999999999999999999999999999999999999854


Q ss_pred             ccc------hhheeeccCccc
Q 023430          266 LCC------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~------~~~~~~~ape~~  280 (282)
                      ...      ..|.-|-|||+|
T Consensus       161 ~SkpPYTeYVSTRWYRAPEvL  181 (538)
T KOG0661|consen  161 RSKPPYTEYVSTRWYRAPEVL  181 (538)
T ss_pred             ccCCCcchhhhcccccchHHh
Confidence            433      349999999987

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.8e-34  Score=251.80  Aligned_cols=161  Identities=40%  Similarity=0.712  Sum_probs=142.7

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      +.||+|+||.||+++.+     ..+..||+|++.............+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEe
Confidence            36999999999999976     4567899999987654444555667789999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------c
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------C  268 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------~  268 (282)
                      |+++|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....       -
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~  155 (323)
T cd05595          76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF  155 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence            999999999998888899999999999999999999999999999999999999999999999999864322       1


Q ss_pred             hhheeeccCcccc
Q 023430          269 FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ~~~~~~~ape~~~  281 (282)
                      .|++.|||||.+.
T Consensus       156 ~gt~~y~aPE~~~  168 (323)
T cd05595         156 CGTPEYLAPEVLE  168 (323)
T ss_pred             cCCcCcCCccccc
Confidence            5789999999873

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=3.4e-34  Score=251.82  Aligned_cols=160  Identities=42%  Similarity=0.723  Sum_probs=142.7

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      ++||+|+||.||+++.+     ..+..||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREK-----ASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEe
Confidence            36899999999999976     4567899999987655445556678889999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-------
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-------  268 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-------  268 (282)
                      |+++|+|..++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....+       
T Consensus        76 y~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~  155 (328)
T cd05593          76 YVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF  155 (328)
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence            9999999999988888999999999999999999999999999999999999999999999999998643221       


Q ss_pred             hhheeeccCccc
Q 023430          269 FFFFLFLGGGVF  280 (282)
Q Consensus       269 ~~~~~~~ape~~  280 (282)
                      .|++.|||||.+
T Consensus       156 ~gt~~y~aPE~~  167 (328)
T cd05593         156 CGTPEYLAPEVL  167 (328)
T ss_pred             cCCcCccChhhh
Confidence            478999999987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=6.2e-34  Score=254.13  Aligned_cols=174  Identities=33%  Similarity=0.592  Sum_probs=150.2

Q ss_pred             hhhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeee
Q 023430          102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLR  181 (282)
Q Consensus       102 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~  181 (282)
                      .....+..++|++.+.||+|+||.||+|+++     .+++.+|+|++.+.........+.+.+|+.+++.++||||++++
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~  109 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHK-----STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF  109 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            3345566789999999999999999999987     45678999999765444444455678899999999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +.+.....+|+||||+++|+|..++... .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+
T Consensus       110 ~~~~~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~  188 (371)
T cd05622         110 YAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT  188 (371)
T ss_pred             EEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence            9999999999999999999999888654 589999999999999999999999999999999999999999999999999


Q ss_pred             ccccc--------cchhheeeccCcccc
Q 023430          262 SHNQL--------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~~--------~~~~~~~~~ape~~~  281 (282)
                      +....        ...|++.|||||.+.
T Consensus       189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~  216 (371)
T cd05622         189 CMKMNKEGMVRCDTAVGTPDYISPEVLK  216 (371)
T ss_pred             eeEcCcCCcccccCcccCccccCHHHHh
Confidence            86321        125799999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-34  Score=255.99  Aligned_cols=163  Identities=21%  Similarity=0.255  Sum_probs=141.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS-  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-  188 (282)
                      ++|.-..+||+|+||.||+|...      .+..||||.+.......   .+.|.+|+.++.+++|||+|+|+|+|.+.+ 
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~------~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~  145 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLS------DGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGE  145 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEEC------CCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCc
Confidence            57777789999999999999865      23689999876543221   344999999999999999999999999888 


Q ss_pred             EEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCG---IVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ..+||+|||++|+|.+++....  .++|.....|+.++++||+|||...   |||||||++|||||++...||+|||+|+
T Consensus       146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~  225 (361)
T KOG1187|consen  146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAK  225 (361)
T ss_pred             eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcc
Confidence            5999999999999999998754  7899999999999999999999753   9999999999999999999999999996


Q ss_pred             cccc---c-----hhheeeccCcccc
Q 023430          264 NQLC---C-----FFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~---~-----~~~~~~~ape~~~  281 (282)
                      ..-.   .     .||.+|+|||++.
T Consensus       226 ~~~~~~~~~~~~~~gt~gY~~PEy~~  251 (361)
T KOG1187|consen  226 LGPEGDTSVSTTVMGTFGYLAPEYAS  251 (361)
T ss_pred             cCCccccceeeecCCCCccCChhhhc
Confidence            4432   1     6899999999874

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-35  Score=260.31  Aligned_cols=164  Identities=24%  Similarity=0.351  Sum_probs=145.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ...|....+||+|+.|.||.++..     ..+..||||.+......   ..+.+.+|+.+|+..+|+|||.+++.|...+
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~-----~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d  343 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKI-----STKQEVAIKRMDLRKQP---KKELLLNEILVMRDLHHPNIVNFLDSYLVGD  343 (550)
T ss_pred             hhhhcchhhhccccccceeeeeec-----cCCceEEEEEEEeccCC---chhhhHHHHHHHHhccchHHHHHHHHhcccc
Confidence            346888899999999999999976     45667999999876533   3355789999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC  268 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~  268 (282)
                      .+|+|||||+||+|.+.+.. -.++|.++..++++++.||+|||.+||||||||.+|||++.+|.|||+|||+|....+.
T Consensus       344 eLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~  422 (550)
T KOG0578|consen  344 ELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE  422 (550)
T ss_pred             eeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence            99999999999999888754 45899999999999999999999999999999999999999999999999999865444


Q ss_pred             -------hhheeeccCcccc
Q 023430          269 -------FFFFLFLGGGVFN  281 (282)
Q Consensus       269 -------~~~~~~~ape~~~  281 (282)
                             +||+-|||||+.+
T Consensus       423 ~~KR~TmVGTPYWMAPEVvt  442 (550)
T KOG0578|consen  423 QSKRSTMVGTPYWMAPEVVT  442 (550)
T ss_pred             cCccccccCCCCccchhhhh
Confidence                   8999999999863

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-34  Score=254.37  Aligned_cols=150  Identities=47%  Similarity=0.881  Sum_probs=137.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|++.     ..++.||+|++.+.........+.+.+|+.+++.++|+||+++++++...+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   75 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDK-----DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEH   75 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEEC-----CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCe
Confidence            47999999999999999999976     3577899999987655454566778899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      +|+||||+++++|..++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~  150 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKK  150 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCcc
Confidence            999999999999999998888899999999999999999999999999999999999999999999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=5.8e-34  Score=254.27  Aligned_cols=172  Identities=34%  Similarity=0.606  Sum_probs=149.4

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeE
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRY  182 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~  182 (282)
                      ....+..++|++.+.||+|+||.||+++++     ..+..||+|++.+.........+.+.+|+.+++.++||||+++++
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~  110 (370)
T cd05596          36 TKLRMKAEDFDVIKVIGRGAFGEVQLVRHK-----SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHY  110 (370)
T ss_pred             ccCCCCHHHcEEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEE
Confidence            344566789999999999999999999977     456789999997655444445556788999999999999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ++..++.+|+||||+++|+|..++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       111 ~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~  189 (370)
T cd05596         111 AFQDDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC  189 (370)
T ss_pred             EEecCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccce
Confidence            99999999999999999999988865 45889999999999999999999999999999999999999999999999998


Q ss_pred             cccc--------cchhheeeccCccc
Q 023430          263 HNQL--------CCFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~--------~~~~~~~~~ape~~  280 (282)
                      ....        ...|++.|||||.+
T Consensus       190 ~~~~~~~~~~~~~~~gt~~y~aPE~~  215 (370)
T cd05596         190 MKMDANGMVRCDTAVGTPDYISPEVL  215 (370)
T ss_pred             eeccCCCcccCCCCCCCcCeECHHHh
Confidence            6422        12579999999976

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-34  Score=253.24  Aligned_cols=167  Identities=30%  Similarity=0.466  Sum_probs=149.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~  187 (282)
                      ...|++.+.||+|.||.||+|+.+.     +++.+|+|++.+.........+.+.+|+.+|+.+. |||||.+++.|++.
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~-----tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~  108 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKS-----TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP  108 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecC-----CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence            3579999999999999999999884     47789999998877655555677899999999998 99999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC----CcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD----GHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~----~~v~l~Dfg~s~  263 (282)
                      ..+++|||+|.||.|++.+.+. .+++..+..++.|++.++.|||++||+||||||+|+|+...    +.++++|||+|.
T Consensus       109 ~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~  187 (382)
T KOG0032|consen  109 DSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK  187 (382)
T ss_pred             CeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence            9999999999999999999876 49999999999999999999999999999999999999644    479999999996


Q ss_pred             cccc------chhheeeccCcccc
Q 023430          264 NQLC------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~------~~~~~~~~ape~~~  281 (282)
                      ...-      -.|++.|+|||++.
T Consensus       188 ~~~~~~~~~~~~Gtp~y~APEvl~  211 (382)
T KOG0032|consen  188 FIKPGERLHTIVGTPEYVAPEVLG  211 (382)
T ss_pred             EccCCceEeeecCCccccCchhhc
Confidence            4332      18899999999985

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.4e-34  Score=248.79  Aligned_cols=159  Identities=45%  Similarity=0.752  Sum_probs=141.3

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEecc
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFI  197 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  197 (282)
                      ||+|+||.||+|+++     .+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKR-----DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC
Confidence            699999999999976     356789999998655444555667788999999999999999999999999999999999


Q ss_pred             CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------chh
Q 023430          198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------CFF  270 (282)
Q Consensus       198 ~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------~~~  270 (282)
                      ++|+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++....       ..|
T Consensus        76 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  155 (312)
T cd05585          76 NGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG  155 (312)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccC
Confidence            9999999998888899999999999999999999999999999999999999999999999999864221       157


Q ss_pred             heeeccCcccc
Q 023430          271 FFLFLGGGVFN  281 (282)
Q Consensus       271 ~~~~~ape~~~  281 (282)
                      ++.|||||.+.
T Consensus       156 t~~y~aPE~~~  166 (312)
T cd05585         156 TPEYLAPELLL  166 (312)
T ss_pred             CcccCCHHHHc
Confidence            99999999863

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=7.4e-34  Score=249.73  Aligned_cols=167  Identities=39%  Similarity=0.676  Sum_probs=148.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+++.+     ..++.||+|+++..........+.+.+|+.+++.++|+||+++++++...+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~   75 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREK-----ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDN   75 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCe
Confidence            37999999999999999999876     4567899999987655445566778899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .|+||||+++|+|.+++.+. ..+++..+..++.|++.||.|||+++|+||||||+|||++.+|.++|+|||++..... 
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            99999999999999999876 6799999999999999999999999999999999999999999999999999864221 


Q ss_pred             -------chhheeeccCcccc
Q 023430          268 -------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 -------~~~~~~~~ape~~~  281 (282)
                             ..|++.|||||.+.
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~  176 (330)
T cd05601         156 KMVNSKLPVGTPDYIAPEVLT  176 (330)
T ss_pred             CceeeecccCCccccCHHHhc
Confidence                   25789999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=7.5e-34  Score=249.25  Aligned_cols=160  Identities=41%  Similarity=0.710  Sum_probs=141.5

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      +.||+|+||.||+++++     ..+..||+|++.+...........+.+|+++++.++||||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEK-----ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEe
Confidence            36999999999999876     4567899999987654444555667789999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      |+++|+|..++.+.+.+++..+..++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||++.....       
T Consensus        76 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  155 (325)
T cd05594          76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT  155 (325)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccc
Confidence            99999999999888889999999999999999999997 7999999999999999999999999999864221       


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      ..|++.|||||.+
T Consensus       156 ~~gt~~y~aPE~~  168 (325)
T cd05594         156 FCGTPEYLAPEVL  168 (325)
T ss_pred             ccCCcccCCHHHH
Confidence            1579999999986

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=5.4e-34  Score=251.35  Aligned_cols=174  Identities=20%  Similarity=0.287  Sum_probs=143.1

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      |.+..++|++.++||+|+||.||+|.+.+......+..||+|++....  .....+.+.+|+.+++.+ +||||++++++
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   79 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGA   79 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence            455667899999999999999999987654444556789999986532  223345688899999999 89999999998


Q ss_pred             EEeC-CEEEEEEeccCCCchHHHHHhc-----------------------------------------------------
Q 023430          184 FQTR-SKLYLILDFINGGHLFFHLYRQ-----------------------------------------------------  209 (282)
Q Consensus       184 ~~~~-~~~~lv~e~~~~g~L~~~l~~~-----------------------------------------------------  209 (282)
                      +... ..++++|||+++|+|.+++...                                                     
T Consensus        80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T cd05102          80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP  159 (338)
T ss_pred             ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence            8754 4689999999999999888642                                                     


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc---------hhh
Q 023430          210 ---------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC---------FFF  271 (282)
Q Consensus       210 ---------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~---------~~~  271 (282)
                               ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++....+         .++
T Consensus       160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~  239 (338)
T cd05102         160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP  239 (338)
T ss_pred             chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence                     23677888899999999999999999999999999999999999999999999743211         234


Q ss_pred             eeeccCccc
Q 023430          272 FLFLGGGVF  280 (282)
Q Consensus       272 ~~~~ape~~  280 (282)
                      ..|||||.+
T Consensus       240 ~~y~aPE~~  248 (338)
T cd05102         240 LKWMAPESI  248 (338)
T ss_pred             ccccCcHHh
Confidence            689999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.4e-33  Score=247.50  Aligned_cols=166  Identities=34%  Similarity=0.670  Sum_probs=145.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCC-CeeeeeEEEEeCCE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP-FIVQLRYSFQTRSK  189 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~  189 (282)
                      +|++++.||+|+||.||+|+++     ..++.||+|++.+.........+.+..|+.++..+.|+ +|+.+++++...+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~   75 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR   75 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCE
Confidence            5899999999999999999976     35678999999876544445556678899999999765 68889999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      +|+||||+++|+|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.+|.++|+|||++.....  
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~  155 (324)
T cd05587          76 LYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG  155 (324)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence            999999999999999998888899999999999999999999999999999999999999999999999999864221  


Q ss_pred             -----chhheeeccCcccc
Q 023430          268 -----CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 -----~~~~~~~~ape~~~  281 (282)
                           ..|++.|||||++.
T Consensus       156 ~~~~~~~gt~~y~aPE~~~  174 (324)
T cd05587         156 KTTRTFCGTPDYIAPEIIA  174 (324)
T ss_pred             CceeeecCCccccChhhhc
Confidence                 15799999999863

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-34  Score=255.34  Aligned_cols=177  Identities=21%  Similarity=0.265  Sum_probs=150.2

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .|.+.-++..+.++||+|+||.||+|+.+..... ....||||..+......+.....+.+|+++|+.++|||||++||+
T Consensus       151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~-~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV  229 (474)
T KOG0194|consen  151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGF-KVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV  229 (474)
T ss_pred             ccEEeccCccccceeecccccEEEEEEEEecCCc-eeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            3445555666778999999999999998743221 122289999876444566778889999999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ......++||||+|.||+|.+++.+.+. ++..+...++.+.+.||+|||++++|||||-.+|+|++.++.+||+|||+|
T Consensus       230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs  309 (474)
T KOG0194|consen  230 AVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLS  309 (474)
T ss_pred             EcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccc
Confidence            9999999999999999999999998764 999999999999999999999999999999999999999999999999999


Q ss_pred             cccc-cc--h-h---heeeccCcccc
Q 023430          263 HNQL-CC--F-F---FFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~-~~--~-~---~~~~~ape~~~  281 (282)
                      +... ..  . .   -.+|+|||.++
T Consensus       310 ~~~~~~~~~~~~~klPirWLAPEtl~  335 (474)
T KOG0194|consen  310 RAGSQYVMKKFLKKLPIRWLAPETLN  335 (474)
T ss_pred             cCCcceeeccccccCcceecChhhhc
Confidence            7643 11  1 2   38999999985

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.6e-33  Score=247.95  Aligned_cols=166  Identities=37%  Similarity=0.648  Sum_probs=146.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.++||+|+||.||+++++     ..++.+|+|++.+.........+.+.+|+.++..++|+||+++++++...+.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   75 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLK-----NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENN   75 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEEC-----CCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCE
Confidence            37999999999999999999977     3567899999976544444455668889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      +|+||||+++|+|.+++.+ ...+++..++.++.|++.||.|||+++|+||||||+|||++.++.++|+|||++..... 
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~  155 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  155 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence            9999999999999999976 45689999999999999999999999999999999999999999999999999853211 


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..|++.|||||++
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~  175 (332)
T cd05623         156 GTVQSSVAVGTPDYISPEIL  175 (332)
T ss_pred             CcceecccccCccccCHHHH
Confidence                   2579999999986

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=2.7e-33  Score=241.26  Aligned_cols=166  Identities=35%  Similarity=0.570  Sum_probs=143.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|++.+.||+|+||.||++.++     .++..||+|++.+...........+.+|+.+++.++|+||+++++.+...+..
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~   75 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEe-----cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeE
Confidence            3788999999999999999977     35678999998766543333445577899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          191 YLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ++||||+++|+|..++...  ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++....  
T Consensus        76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631          76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence            9999999999998777543  358899999999999999999999999999999999999999999999999986421  


Q ss_pred             ----cchhheeeccCcccc
Q 023430          267 ----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ----~~~~~~~~~ape~~~  281 (282)
                          ...|+..|||||.+.
T Consensus       156 ~~~~~~~g~~~y~aPE~~~  174 (285)
T cd05631         156 ETVRGRVGTVGYMAPEVIN  174 (285)
T ss_pred             CeecCCCCCCCccCHhhhc
Confidence                225799999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=277.56  Aligned_cols=173  Identities=39%  Similarity=0.638  Sum_probs=158.7

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .-.+..++|+++++||+|+||.|..++++     .++++||+|++.+-....+.....|+.|..+|...+.+.|++++.+
T Consensus        69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k-----~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA  143 (1317)
T KOG0612|consen   69 ELRLKAEDFEILKVIGRGAFGEVALVRHK-----STEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA  143 (1317)
T ss_pred             HHhCCHHhhHHHHHhcccccceeEEEEee-----ccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH
Confidence            34566789999999999999999999988     4678999999998777777777889999999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      |.++.++|+||||++||+|..++.+.+.+++..+++|...|+.||+-||+.|+|||||||+|||||..|++||+|||.|-
T Consensus       144 FQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsCl  223 (1317)
T KOG0612|consen  144 FQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL  223 (1317)
T ss_pred             hcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHH
Confidence            99999999999999999999999998899999999999999999999999999999999999999999999999999985


Q ss_pred             ccccc--------hhheeeccCcccc
Q 023430          264 NQLCC--------FFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~~--------~~~~~~~ape~~~  281 (282)
                      .-..|        .|||-|++||+|.
T Consensus       224 km~~dG~V~s~~aVGTPDYISPEvLq  249 (1317)
T KOG0612|consen  224 KMDADGTVRSSVAVGTPDYISPEVLQ  249 (1317)
T ss_pred             hcCCCCcEEeccccCCCCccCHHHHH
Confidence            43322        8999999999973

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.3e-33  Score=248.11  Aligned_cols=160  Identities=36%  Similarity=0.691  Sum_probs=142.1

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      ++||+|+||.||+++++     ..++.||+|++++.........+.+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELK-----KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence            36899999999999977     45678999999876554555566788899999988 6999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++|+|..++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++....       
T Consensus        76 e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~  155 (329)
T cd05588          76 EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST  155 (329)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence            9999999999988888899999999999999999999999999999999999999999999999999864221       


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      -.|+..|||||.+
T Consensus       156 ~~gt~~y~aPE~~  168 (329)
T cd05588         156 FCGTPNYIAPEIL  168 (329)
T ss_pred             ccCCccccCHHHH
Confidence            1578999999986

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.7e-33  Score=246.37  Aligned_cols=168  Identities=44%  Similarity=0.774  Sum_probs=144.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-hhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-KNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~  188 (282)
                      +|++.+.||+|+||.||+++....  ...++.||+|++.+..... ....+.+..|+.+++.++ |+||+++++++...+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~   78 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTG--HDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA   78 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEccc--CCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC
Confidence            589999999999999999986531  2467889999997654322 233456778999999995 999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .+++||||+++|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... 
T Consensus        79 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~  158 (332)
T cd05614          79 KLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE  158 (332)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence            9999999999999999998888899999999999999999999999999999999999999999999999999864211 


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             -.|++.|||||.+
T Consensus       159 ~~~~~~~~~gt~~y~aPE~~  178 (332)
T cd05614         159 EKERTYSFCGTIEYMAPEII  178 (332)
T ss_pred             CCCccccccCCccccCHHHh
Confidence                   1479999999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=5.9e-33  Score=246.29  Aligned_cols=162  Identities=27%  Similarity=0.392  Sum_probs=138.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|+.++.||+|+||.||+++++     ..++.||||++....  .....+.+.+|+++++.++|+||+++++++...+
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  145 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHR-----PTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG  145 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEEC-----CCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC
Confidence            457888899999999999999876     356789999986542  2233456889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .+++||||+++++|...    ....+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...  
T Consensus       146 ~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~  221 (353)
T PLN00034        146 EIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT  221 (353)
T ss_pred             eEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence            99999999999988542    335677888999999999999999999999999999999999999999999986321  


Q ss_pred             -----cchhheeeccCcccc
Q 023430          267 -----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -----~~~~~~~~~ape~~~  281 (282)
                           ...|+..|||||.++
T Consensus       222 ~~~~~~~~gt~~y~aPE~~~  241 (353)
T PLN00034        222 MDPCNSSVGTIAYMSPERIN  241 (353)
T ss_pred             cccccccccCccccCccccc
Confidence                 226799999999873

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.1e-34  Score=240.28  Aligned_cols=165  Identities=22%  Similarity=0.358  Sum_probs=139.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|+.+..|++|+||.||+|+++     .++.+||+|.++.+.....--+. -.+||.+|.+++|||||.+..+.... 
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk-----~t~eIVALKr~kmekek~GFPIt-sLREIniLl~~~H~NIV~vkEVVvG~~  148 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDK-----KTDEIVALKRLKMEKEKEGFPIT-SLREINILLKARHPNIVEVKEVVVGSN  148 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccC-----CcceeEEeeecccccccCCCcch-hHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence            457999999999999999999977     67889999999876532222222 35799999999999999998887643 


Q ss_pred             -CEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 -SKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                       +.+|||||||+. +|..++...+ .|...++..++.|+++||+|||.+.|+|||||++|+|+...|.+||+|||+|+..
T Consensus       149 ~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y  227 (419)
T KOG0663|consen  149 MDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREY  227 (419)
T ss_pred             cceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhh
Confidence             579999999987 7888887654 7999999999999999999999999999999999999999999999999999743


Q ss_pred             ccc-------hhheeeccCccc
Q 023430          266 LCC-------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~-------~~~~~~~ape~~  280 (282)
                      -.-       .-|.-|-|||.|
T Consensus       228 gsp~k~~T~lVVTLWYRaPELL  249 (419)
T KOG0663|consen  228 GSPLKPYTPLVVTLWYRAPELL  249 (419)
T ss_pred             cCCcccCcceEEEeeecCHHHh
Confidence            322       347888899875

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2.8e-33  Score=245.46  Aligned_cols=166  Identities=34%  Similarity=0.662  Sum_probs=144.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSK  189 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~  189 (282)
                      +|++.+.||+|+||.||+|+++     ..+..||+|++.+.........+.+..|..++..+ .|++|+++++++...+.
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~   75 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDR   75 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCE
Confidence            5889999999999999999976     35678999999876544444455567788888777 48999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      +|+||||+++|+|..++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....   
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~  155 (323)
T cd05616          76 LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG  155 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999987432   


Q ss_pred             ----cchhheeeccCcccc
Q 023430          267 ----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ----~~~~~~~~~ape~~~  281 (282)
                          ...|++.|||||.+.
T Consensus       156 ~~~~~~~gt~~y~aPE~~~  174 (323)
T cd05616         156 VTTKTFCGTPDYIAPEIIA  174 (323)
T ss_pred             CccccCCCChhhcCHHHhc
Confidence                125799999999874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2.2e-33  Score=245.89  Aligned_cols=161  Identities=39%  Similarity=0.691  Sum_probs=140.8

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+|+++     ..++.||+|++.+.........+.+..|+.++..+ +||||+++++++...+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLK-----ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEc-----CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEE
Confidence            36999999999999976     45678999999876544445556677788888776 6999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++|+|..++.+...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.....       
T Consensus        76 Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~  155 (320)
T cd05590          76 EFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST  155 (320)
T ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence            9999999999998888899999999999999999999999999999999999999999999999999864321       


Q ss_pred             chhheeeccCcccc
Q 023430          268 CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~~~~~~~~ape~~~  281 (282)
                      ..|++.|||||.+.
T Consensus       156 ~~gt~~y~aPE~~~  169 (320)
T cd05590         156 FCGTPDYIAPEILQ  169 (320)
T ss_pred             cccCccccCHHHHc
Confidence            15799999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.2e-33  Score=245.09  Aligned_cols=164  Identities=48%  Similarity=0.785  Sum_probs=140.9

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh-hhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII-KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+++....  ...++.||+|++.+.... .......+.+|+.+|+.++||||+++++++..++..|+||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   79 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTG--ADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLIL   79 (323)
T ss_pred             ceeeecCCeEEEEEEEccc--CCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEE
Confidence            5799999999999986421  245678999999765432 2233445778999999999999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++++|.+++.+.+.+.+..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++....       
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  159 (323)
T cd05584          80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT  159 (323)
T ss_pred             eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccc
Confidence            9999999999998888899999999999999999999999999999999999999999999999999863221       


Q ss_pred             chhheeeccCcccc
Q 023430          268 CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~~~~~~~~ape~~~  281 (282)
                      ..|++.|||||.+.
T Consensus       160 ~~gt~~y~aPE~~~  173 (323)
T cd05584         160 FCGTIEYMAPEILM  173 (323)
T ss_pred             cCCCccccChhhcc
Confidence            15789999999873

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-35  Score=252.33  Aligned_cols=165  Identities=21%  Similarity=0.374  Sum_probs=148.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ..|..++.||+|+||.||+|.+.     .+++.||+|++..+.  .+...+.+++|+.+|.+++++||.++|+.|..+..
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~-----~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~   85 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDN-----KTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK   85 (467)
T ss_pred             cccccchhccccccceeeeeeec-----cccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeeccc
Confidence            35888899999999999999976     577889999998765  34556778999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-  268 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-  268 (282)
                      +|++||||.||++.+.+.....+.+..+..++++++.||.|||.++.+|||||+.|||+..+|.||++|||.+...-.+ 
T Consensus        86 LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~  165 (467)
T KOG0201|consen   86 LWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV  165 (467)
T ss_pred             HHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence            9999999999999999988777799999999999999999999999999999999999999999999999998532222 


Q ss_pred             ------hhheeeccCcccc
Q 023430          269 ------FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ------~~~~~~~ape~~~  281 (282)
                            +||+-|||||+++
T Consensus       166 ~rr~tfvGTPfwMAPEVI~  184 (467)
T KOG0201|consen  166 KRRKTFVGTPFWMAPEVIK  184 (467)
T ss_pred             hccccccccccccchhhhc
Confidence                  7899999999974

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=3.5e-33  Score=244.88  Aligned_cols=166  Identities=35%  Similarity=0.681  Sum_probs=144.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSK  189 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~  189 (282)
                      +|+..+.||+|+||.||+|+++     .+++.||+|++.+.........+.+..|+.+++.+. |++|+++++++...+.
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~   75 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR   75 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCE
Confidence            4788899999999999999976     456789999998765444445566778888998886 5778889999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      +|+||||+++|+|..++.+.+.+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.....  
T Consensus        76 ~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~  155 (323)
T cd05615          76 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG  155 (323)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence            999999999999999998888899999999999999999999999999999999999999999999999999864221  


Q ss_pred             -----chhheeeccCcccc
Q 023430          268 -----CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 -----~~~~~~~~ape~~~  281 (282)
                           ..|++.|||||++.
T Consensus       156 ~~~~~~~gt~~y~aPE~~~  174 (323)
T cd05615         156 VTTRTFCGTPDYIAPEIIA  174 (323)
T ss_pred             ccccCccCCccccCHHHHc
Confidence                 14799999999863

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.4e-33  Score=244.96  Aligned_cols=164  Identities=33%  Similarity=0.568  Sum_probs=141.0

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHH---HhcCCCCeeeeeEEEEeCC
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL---TKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~  188 (282)
                      |++++.||+|+||.||+|.++     .++..||||++++.........+.+.+|+.++   +.++||||+++++++...+
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~   75 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYK-----KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED   75 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence            678999999999999999977     45678999999876544445556677777665   4567999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      ..|+||||+++++|..++.. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        76 ~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05589          76 HVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF  154 (324)
T ss_pred             EEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence            99999999999999887754 5689999999999999999999999999999999999999999999999999864221 


Q ss_pred             ------chhheeeccCcccc
Q 023430          268 ------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ------~~~~~~~~ape~~~  281 (282)
                            -.|++.|||||.+.
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~  174 (324)
T cd05589         155 GDRTSTFCGTPEFLAPEVLT  174 (324)
T ss_pred             CCcccccccCccccCHhHhc
Confidence                  25799999999863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3.7e-33  Score=245.32  Aligned_cols=161  Identities=37%  Similarity=0.704  Sum_probs=141.5

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+++++     ..+..||+|++.+.........+.+.+|+.++..+ +||||+++++++...+..|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLK-----KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence            46999999999999977     45678999999876544455566678899888776 7999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-------c
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-------C  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-------~  267 (282)
                      ||+++|+|..++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++...       .
T Consensus        76 E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~  155 (329)
T cd05618          76 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST  155 (329)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence            999999999988888889999999999999999999999999999999999999999999999999986422       1


Q ss_pred             chhheeeccCcccc
Q 023430          268 CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~~~~~~~~ape~~~  281 (282)
                      ..|+..|||||.+.
T Consensus       156 ~~gt~~y~aPE~~~  169 (329)
T cd05618         156 FCGTPNYIAPEILR  169 (329)
T ss_pred             ccCCccccCHHHHc
Confidence            25799999999863

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=3.1e-33  Score=244.96  Aligned_cols=160  Identities=36%  Similarity=0.686  Sum_probs=140.2

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      ++||+|+||.||+|+++     ..+..||+|++.+.........+.+..|.++++.+ +||||+++++++...+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELK-----GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEEC-----CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEE
Confidence            36899999999999976     35678999999876544445556677888888866 7999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++++|..++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.....       
T Consensus        76 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  155 (321)
T cd05591          76 EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT  155 (321)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence            9999999999998888899999999999999999999999999999999999999999999999999864221       


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      ..|++.|||||.+
T Consensus       156 ~~gt~~y~aPE~~  168 (321)
T cd05591         156 FCGTPDYIAPEIL  168 (321)
T ss_pred             cccCccccCHHHH
Confidence            1478999999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=3.3e-33  Score=244.26  Aligned_cols=161  Identities=35%  Similarity=0.683  Sum_probs=138.5

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh-cCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      ++||+|+||.||+|+++     .++..||+|+++..........+.+..|..++.. .+||||+++++++...+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELK-----GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence            36999999999999976     3567899999987654444444555667777765 47999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++|+|..++...+.+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||++.....       
T Consensus        76 e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~  155 (316)
T cd05592          76 EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST  155 (316)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence            9999999999998888899999999999999999999999999999999999999999999999999964321       


Q ss_pred             chhheeeccCcccc
Q 023430          268 CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~~~~~~~~ape~~~  281 (282)
                      ..|++.|||||.+.
T Consensus       156 ~~gt~~y~aPE~~~  169 (316)
T cd05592         156 FCGTPDYIAPEILK  169 (316)
T ss_pred             ccCCccccCHHHHc
Confidence            15799999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=4.3e-33  Score=244.02  Aligned_cols=160  Identities=47%  Similarity=0.769  Sum_probs=137.1

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHH-HHHHhcCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER-DILTKVTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      ++||+|+||.||+|+++     ..+..||+|++.+...........+..|+ .+++.++||||+++++.+...+..|+||
T Consensus         1 ~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRK-----SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence            36999999999999976     45678999999865543333344455555 4678899999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++++|...+.+...+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....       
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (321)
T cd05603          76 DYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST  155 (321)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence            9999999999888878899999999999999999999999999999999999999999999999999864221       


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      ..|++.|||||.+
T Consensus       156 ~~gt~~y~aPE~~  168 (321)
T cd05603         156 FCGTPEYLAPEVL  168 (321)
T ss_pred             ccCCcccCCHHHh
Confidence            1468999999986

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=4.5e-33  Score=244.11  Aligned_cols=161  Identities=47%  Similarity=0.765  Sum_probs=137.6

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHH-HHHhcCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD-ILTKVTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||+||+|+++     ..++.||+|++.+.........+.+..|.. +++.++||||+++++.+...+..|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHK-----ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence            36999999999999976     456789999998764433333444555544 567899999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++|+|..++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....       
T Consensus        76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (323)
T cd05575          76 DYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST  155 (323)
T ss_pred             cCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence            9999999999998888899999999999999999999999999999999999999999999999999864221       


Q ss_pred             chhheeeccCcccc
Q 023430          268 CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~~~~~~~~ape~~~  281 (282)
                      ..|++.|||||.+.
T Consensus       156 ~~gt~~y~aPE~~~  169 (323)
T cd05575         156 FCGTPEYLAPEVLR  169 (323)
T ss_pred             ccCChhhcChhhhc
Confidence            14789999999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=4.4e-33  Score=244.41  Aligned_cols=161  Identities=47%  Similarity=0.758  Sum_probs=137.7

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHH-HHHhcCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD-ILTKVTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+|+++     ..+..||+|++.+...........+..|.. +++.++||||+++++.+...+..|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRK-----LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEE
Confidence            36899999999999976     456789999998764433334444555554 577899999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++|+|..++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.++|+|||++.....       
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~  155 (325)
T cd05604          76 DFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT  155 (325)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc
Confidence            9999999999998888899999999999999999999999999999999999999999999999999864221       


Q ss_pred             chhheeeccCcccc
Q 023430          268 CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~~~~~~~~ape~~~  281 (282)
                      ..|+..|||||.+.
T Consensus       156 ~~gt~~y~aPE~~~  169 (325)
T cd05604         156 FCGTPEYLAPEVIR  169 (325)
T ss_pred             ccCChhhCCHHHHc
Confidence            14789999999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.4e-33  Score=238.14  Aligned_cols=154  Identities=38%  Similarity=0.651  Sum_probs=143.1

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      ...++.++|++++.||.|.-|+||+|+.++     +...+|+|++.+.....+....+.+.|.+||+.++||.+++||..
T Consensus        71 ~~~l~l~~f~llk~LG~GdiG~VyL~~l~~-----t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~  145 (459)
T KOG0610|consen   71 DGSLGLRHFRLLKRLGCGDIGTVYLVELRG-----TNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS  145 (459)
T ss_pred             CCccCHHHHHHHHHcCCCCceeEEEEEecC-----CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe
Confidence            345677889999999999999999999874     458899999999988888888889999999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      |+.....|+|||||+||+|..+++++  +.|++..++.++.+++.||+|||..|||.|||||+||||.++|+|+|+||-+
T Consensus       146 fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDL  225 (459)
T KOG0610|consen  146 FETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDL  225 (459)
T ss_pred             eeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccc
Confidence            99999999999999999999988876  4699999999999999999999999999999999999999999999999976


Q ss_pred             c
Q 023430          262 S  262 (282)
Q Consensus       262 s  262 (282)
                      |
T Consensus       226 S  226 (459)
T KOG0610|consen  226 S  226 (459)
T ss_pred             c
Confidence            6

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=6.4e-33  Score=243.61  Aligned_cols=160  Identities=38%  Similarity=0.710  Sum_probs=142.3

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+|+.+     ..++.||+|++.+.........+.+.+|+.++..+ +|+||+.+++++...+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLK-----KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence            36999999999999976     45678999999877655555667788899999888 5999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++|+|..++...+.+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++.....       
T Consensus        76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (327)
T cd05617          76 EYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST  155 (327)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence            9999999999988888899999999999999999999999999999999999999999999999999864221       


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      -.|++.|||||.+
T Consensus       156 ~~gt~~y~aPE~~  168 (327)
T cd05617         156 FCGTPNYIAPEIL  168 (327)
T ss_pred             ccCCcccCCHHHH
Confidence            1579999999986

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.2e-33  Score=249.39  Aligned_cols=167  Identities=32%  Similarity=0.437  Sum_probs=150.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .+.|.+...||+|.|+.|.++++.     .++..||||++.+.... ...++.+.+|+++|+.++|||||+++.+...+.
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~-----~t~~~VaiK~idkt~ln-~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~  128 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHI-----LTGTEVAIKIIDKTQLN-PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA  128 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEec-----CCCceEEEEEehhcccC-hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence            468999999999999999999987     45677999999887643 344455889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc----
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN----  264 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~----  264 (282)
                      .+|+||||+.+|.+++++.+++.+.+..++.++.|++.+++|||+++|||||||.+||||+.+.++||+|||+|..    
T Consensus       129 ~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~  208 (596)
T KOG0586|consen  129 TLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG  208 (596)
T ss_pred             eeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999953    


Q ss_pred             -cccc-hhheeeccCcccc
Q 023430          265 -QLCC-FFFFLFLGGGVFN  281 (282)
Q Consensus       265 -~~~~-~~~~~~~ape~~~  281 (282)
                       .+.+ .|++.|+|||.|+
T Consensus       209 ~~lqt~cgsppyAaPEl~~  227 (596)
T KOG0586|consen  209 LMLQTFCGSPPYAAPELFN  227 (596)
T ss_pred             ccccccCCCCCccChHhhc
Confidence             2222 7799999999985

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=6.6e-33  Score=243.25  Aligned_cols=160  Identities=46%  Similarity=0.754  Sum_probs=135.8

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHH-HHHHhcCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER-DILTKVTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+|+++     ..++.||+|++.+...........+..|. .+++.++|+||+++++++...+.+|+||
T Consensus         1 ~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHK-----AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEE
Confidence            36999999999999976     35678999999865433333333344444 4578899999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++++|..++...+.+.+..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....       
T Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~  155 (325)
T cd05602          76 DYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST  155 (325)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence            9999999999998888899999999999999999999999999999999999999999999999999864221       


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      -.|++.|||||++
T Consensus       156 ~~gt~~y~aPE~~  168 (325)
T cd05602         156 FCGTPEYLAPEVL  168 (325)
T ss_pred             ccCCccccCHHHH
Confidence            1479999999986

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=7.8e-33  Score=241.94  Aligned_cols=161  Identities=32%  Similarity=0.623  Sum_probs=139.0

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh-cCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      ++||+|+||.||+|+++     .++..||+|++++.........+.+..|..++.. ++|+||+++++++...+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELK-----GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence            46999999999999987     3567899999987654333444556678888775 48999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-------c
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-------C  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-------~  267 (282)
                      ||+.+|+|..++...+.+++.++..++.|++.||+|||++||+||||||+|||++.++.++|+|||++....       .
T Consensus        76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (316)
T cd05620          76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST  155 (316)
T ss_pred             CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence            999999999999888889999999999999999999999999999999999999999999999999986421       1


Q ss_pred             chhheeeccCcccc
Q 023430          268 CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~~~~~~~~ape~~~  281 (282)
                      ..|++.|||||++.
T Consensus       156 ~~gt~~y~aPE~~~  169 (316)
T cd05620         156 FCGTPDYIAPEILQ  169 (316)
T ss_pred             cCCCcCccCHHHHc
Confidence            15799999999873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-34  Score=245.88  Aligned_cols=172  Identities=38%  Similarity=0.667  Sum_probs=153.6

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      +.+..+.|...++||+|+||.||-|+.+     .+++.||+|.+.+..+..+.......+|..+|.+++.+.||.+-.+|
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acqvr-----aTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf  254 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQVR-----ATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF  254 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEEEe-----cchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee
Confidence            4466778999999999999999999877     57889999999887765555555567899999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ++.+.+++||..|.||+|..+|...+  .|++.+++.++.+|+.||++||+.+||.|||||+|||||+.|+|.|+|+|+|
T Consensus       255 eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLA  334 (591)
T KOG0986|consen  255 ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLA  334 (591)
T ss_pred             cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceE
Confidence            99999999999999999998888766  6999999999999999999999999999999999999999999999999999


Q ss_pred             cc-----ccc-chhheeeccCcccc
Q 023430          263 HN-----QLC-CFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~-----~~~-~~~~~~~~ape~~~  281 (282)
                      -.     -+. ..||.+|||||+++
T Consensus       335 vei~~g~~~~~rvGT~GYMAPEvl~  359 (591)
T KOG0986|consen  335 VEIPEGKPIRGRVGTVGYMAPEVLQ  359 (591)
T ss_pred             EecCCCCccccccCcccccCHHHHc
Confidence            42     222 28999999999985

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-33  Score=249.61  Aligned_cols=152  Identities=44%  Similarity=0.793  Sum_probs=143.8

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      ++...-|..++.||-|+||+|.+++..     .+..+||+|.+++.....+.++..++.|..||...+++.||+||..|.
T Consensus       625 KMdKSmFvkik~iGvGAFGeV~Lv~Kv-----DT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ  699 (1034)
T KOG0608|consen  625 KMDKSMFVKIKTIGVGAFGEVCLVRKV-----DTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ  699 (1034)
T ss_pred             hccccceEEEeeecccccceeEEEeec-----chhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec
Confidence            455677999999999999999999865     357789999999998888888899999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +.+.+|+||+|++||++..+|.+.+.|.|..+++++.++..|+++.|..|+|||||||+|||||.+|++||.|||||
T Consensus       700 DkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLC  776 (1034)
T KOG0608|consen  700 DKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC  776 (1034)
T ss_pred             cCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.9e-33  Score=236.18  Aligned_cols=164  Identities=24%  Similarity=0.368  Sum_probs=138.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC-eeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF-IVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~  188 (282)
                      ..|+.+++||+|+||+||+|+.+     .++..||+|+++..... +.......+|+.+|+.++|+| |+.+++++.+.+
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~-----~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSK-----RTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEe-----cCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecc
Confidence            35777788999999999999988     45688999999876432 122233567999999999999 999999998877


Q ss_pred             ------EEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEe
Q 023430          189 ------KLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       189 ------~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                            .+++|+||+.. +|..++....    .++...++.+++||+.||+|||+++|+||||||.||||+++|.+||+|
T Consensus        85 ~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaD  163 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLAD  163 (323)
T ss_pred             cccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeec
Confidence                  89999999965 8888887644    477789999999999999999999999999999999999999999999


Q ss_pred             cCccccc-------ccchhheeeccCccc
Q 023430          259 SLNSHNQ-------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~-------~~~~~~~~~~ape~~  280 (282)
                      ||+|+..       ....+|.-|=|||++
T Consensus       164 FGlAra~~ip~~~yt~evvTlWYRaPEvL  192 (323)
T KOG0594|consen  164 FGLARAFSIPMRTYTPEVVTLWYRAPEVL  192 (323)
T ss_pred             cchHHHhcCCcccccccEEEeeccCHHHh
Confidence            9999732       222568889999975

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-35  Score=242.91  Aligned_cols=160  Identities=19%  Similarity=0.329  Sum_probs=144.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      -|.++++||+|+||.||++.++     .++.++|||.+..+     ..++.+..|+.+|++++.++||++||.|.....+
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~-----EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDL  103 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHR-----ESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDL  103 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHh-----ccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCce
Confidence            4677889999999999999988     57889999998654     3456788899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-
Q 023430          191 YLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-  268 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-  268 (282)
                      |||||||..|++.+.+.. ++.+.+.++..+++..++||+|||...-||||||..|||++.+|..||+|||.+.+.... 
T Consensus       104 WIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM  183 (502)
T KOG0574|consen  104 WIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM  183 (502)
T ss_pred             EeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence            999999999999998864 567999999999999999999999999999999999999999999999999999654433 


Q ss_pred             ------hhheeeccCccc
Q 023430          269 ------FFFFLFLGGGVF  280 (282)
Q Consensus       269 ------~~~~~~~ape~~  280 (282)
                            .||+.|||||++
T Consensus       184 AKRNTVIGTPFWMAPEVI  201 (502)
T KOG0574|consen  184 AKRNTVIGTPFWMAPEVI  201 (502)
T ss_pred             HhhCccccCcccccHHHH
Confidence                  789999999986

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.2e-32  Score=237.56  Aligned_cols=164  Identities=21%  Similarity=0.338  Sum_probs=140.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.++||+|+||.||+|..+     .++..||+|+++....  ......+.+|+.+++.++|+||+++++++....
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   76 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSK-----LTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTER   76 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEEC-----CCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            467999999999999999999876     3567899999865431  122345678999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ..++||||+.+ +|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++... 
T Consensus        77 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~  155 (288)
T cd07871          77 CLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSV  155 (288)
T ss_pred             eEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence            99999999985 8888886544 47899999999999999999999999999999999999999999999999986321 


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...+++.|||||.+
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~  175 (288)
T cd07871         156 PTKTYSNEVVTLWYRPPDVL  175 (288)
T ss_pred             CCccccCceecccccChHHh
Confidence                  22568999999976

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.7e-32  Score=238.25  Aligned_cols=171  Identities=22%  Similarity=0.280  Sum_probs=141.5

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCC-----------CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDD-----------GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF  176 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n  176 (282)
                      ..++|++.++||+|+||.||+|.+....+           ...+..||+|++....  .......+.+|+.+++.++|||
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~n   80 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPN   80 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCC
Confidence            45689999999999999999998653221           1234579999987543  2334556889999999999999


Q ss_pred             eeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCE
Q 023430          177 IVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-------------------IFREDQARFYTAEIVSAVSHLHKCGIV  237 (282)
Q Consensus       177 Iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~i~~qi~~gL~ylH~~~ii  237 (282)
                      |+++++++...+..++||||+++|+|.+++....                   .+++..+..++.|++.||.|||++||+
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv  160 (304)
T cd05096          81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV  160 (304)
T ss_pred             eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            9999999999999999999999999999886532                   356778899999999999999999999


Q ss_pred             eeccCCCceEEcCCCcEEEEecCccccccc---------chhheeeccCccc
Q 023430          238 HRDLKPENILMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       238 HrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      ||||||+|||++.++.+||+|||+++....         ..++..|||||.+
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  212 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECI  212 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHH
Confidence            999999999999999999999999864211         1236789999976

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=6.1e-33  Score=247.97  Aligned_cols=175  Identities=17%  Similarity=0.244  Sum_probs=146.6

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRY  182 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~  182 (282)
                      .|.+..++|++.+.||+|+||.||+|.+..++.......||+|++.....  ....+.+.+|+.+++.+ +|+||+++++
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~  109 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLG  109 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEee
Confidence            34556678999999999999999999987665555667899999975432  23345688899999999 7999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhc-----------------------------------------------------
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQ-----------------------------------------------------  209 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------------------------------------------  209 (282)
                      ++...+.+++|||||++|+|.+++...                                                     
T Consensus       110 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (374)
T cd05106         110 ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS  189 (374)
T ss_pred             EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence            999999999999999999999888542                                                     


Q ss_pred             -----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc----
Q 023430          210 -----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC----  268 (282)
Q Consensus       210 -----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~----  268 (282)
                                       ..+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.....    
T Consensus       190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~  269 (374)
T cd05106         190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV  269 (374)
T ss_pred             cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence                             13677888999999999999999999999999999999999999999999998643221    


Q ss_pred             -----hhheeeccCccc
Q 023430          269 -----FFFFLFLGGGVF  280 (282)
Q Consensus       269 -----~~~~~~~ape~~  280 (282)
                           .++..|||||++
T Consensus       270 ~~~~~~~~~~y~aPE~~  286 (374)
T cd05106         270 VKGNARLPVKWMAPESI  286 (374)
T ss_pred             eccCCCCccceeCHHHh
Confidence                 124579999976

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3e-32  Score=239.67  Aligned_cols=167  Identities=23%  Similarity=0.296  Sum_probs=146.8

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+++++     ..+..+|+|++....  .....+.+.+|+++|+.++|+||+++++++...
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   75 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHK-----PSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD   75 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEEC-----CCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence            4578999999999999999999977     456789999987542  223445688999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      +.+++||||+++++|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.++|+|||++....
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649          76 GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             CEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence            99999999999999999998878899999999999999999999986 59999999999999999999999999986432


Q ss_pred             c-----chhheeeccCcccc
Q 023430          267 C-----CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~-----~~~~~~~~ape~~~  281 (282)
                      .     ..|++.|+|||.+.
T Consensus       156 ~~~~~~~~g~~~y~aPE~~~  175 (331)
T cd06649         156 DSMANSFVGTRSYMSPERLQ  175 (331)
T ss_pred             ccccccCCCCcCcCCHhHhc
Confidence            2     15789999999863

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.4e-32  Score=245.31  Aligned_cols=161  Identities=22%  Similarity=0.236  Sum_probs=140.9

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+...+|++++.||+|+||.||+|...     .+++.||+|....         +.+.+|+++|+.++||||++++++|.
T Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~-----~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~  153 (391)
T PHA03212         88 GIEKAGFSILETFTPGAEGFAFACIDN-----KTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFT  153 (391)
T ss_pred             ccccCCcEEEEEEcCCCCeEEEEEEEC-----CCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEE
Confidence            355678999999999999999999976     4567899996532         23567999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .....++|||++. ++|..++.....+++..++.++.|++.||.|||++|||||||||+|||++.++.++|+|||++...
T Consensus       154 ~~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        154 YNKFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             ECCeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            9999999999995 688888887778999999999999999999999999999999999999999999999999998532


Q ss_pred             c--------cchhheeeccCcccc
Q 023430          266 L--------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~--------~~~~~~~~~ape~~~  281 (282)
                      .        ...||+.|||||++.
T Consensus       233 ~~~~~~~~~~~~gt~~y~aPE~~~  256 (391)
T PHA03212        233 VDINANKYYGWAGTIATNAPELLA  256 (391)
T ss_pred             ccccccccccccCccCCCChhhhc
Confidence            1        125799999999873

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-32  Score=241.49  Aligned_cols=158  Identities=49%  Similarity=0.806  Sum_probs=135.8

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc---CCCCeeeeeEEEEeCCEEEEEE
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV---THPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      ||+|+||+||+|+++     ..+..||+|++.+...........+..|..++..+   .||||+++++.+......|+||
T Consensus         1 lG~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKK-----DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEEC-----CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence            699999999999976     45678999999765443333344455577776655   6999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++|+|..++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....       
T Consensus        76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~  155 (330)
T cd05586          76 DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNT  155 (330)
T ss_pred             cCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccC
Confidence            9999999999998888899999999999999999999999999999999999999999999999999864221       


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      ..|+..|||||.+
T Consensus       156 ~~gt~~y~aPE~~  168 (330)
T cd05586         156 FCGTTEYLAPEVL  168 (330)
T ss_pred             ccCCccccCHHHH
Confidence            2578999999986

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.2e-32  Score=239.13  Aligned_cols=164  Identities=21%  Similarity=0.364  Sum_probs=139.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+.+     ..++.||+|++.....  ......+.+|+.+++.++||||+++++++....
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   76 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSK-----VNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKE   76 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEEC-----CCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCC
Confidence            468999999999999999999976     3567899999875432  122234667999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ..++||||+. ++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.... 
T Consensus        77 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  155 (303)
T cd07869          77 TLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSV  155 (303)
T ss_pred             eEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence            9999999996 5677766553 568899999999999999999999999999999999999999999999999986321 


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...+++.|||||++
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~  175 (303)
T cd07869         156 PSHTYSNEVVTLWYRPPDVL  175 (303)
T ss_pred             CCccCCCCcccCCCCChHHH
Confidence                  12468899999976

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.7e-32  Score=239.75  Aligned_cols=161  Identities=33%  Similarity=0.634  Sum_probs=138.4

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh-cCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+|+++     ..+..||+|+++..........+....|..+++. ++||||+++++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELK-----GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEE
Confidence            36999999999999976     3567899999987643333344556667778776 48999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-------c
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-------C  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-------~  267 (282)
                      ||+++|+|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....       .
T Consensus        76 ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (316)
T cd05619          76 EYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT  155 (316)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceee
Confidence            999999999999877789999999999999999999999999999999999999999999999999986422       1


Q ss_pred             chhheeeccCcccc
Q 023430          268 CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~~~~~~~~ape~~~  281 (282)
                      ..|++.|||||.+.
T Consensus       156 ~~gt~~y~aPE~~~  169 (316)
T cd05619         156 FCGTPDYIAPEILL  169 (316)
T ss_pred             ecCCccccCHHHHc
Confidence            15789999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.5e-32  Score=240.24  Aligned_cols=163  Identities=47%  Similarity=0.755  Sum_probs=140.5

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      +.||+|+||.||+++...  ....+..||+|++.+.... ......+.+|+++++.++||||+++++++...+.+|+|||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   78 (318)
T cd05582           2 KVLGQGSFGKVFLVRKIT--GPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILD   78 (318)
T ss_pred             ceeeeCCCEEEEEEEEec--cCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEc
Confidence            579999999999987642  1245778999999865432 2233456789999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-------
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-------  268 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-------  268 (282)
                      |+++|+|..++.+...+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......       
T Consensus        79 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~  158 (318)
T cd05582          79 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF  158 (318)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence            9999999999988888999999999999999999999999999999999999999999999999998643222       


Q ss_pred             hhheeeccCcccc
Q 023430          269 FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ~~~~~~~ape~~~  281 (282)
                      .|++.|||||.+.
T Consensus       159 ~g~~~y~aPE~~~  171 (318)
T cd05582         159 CGTVEYMAPEVVN  171 (318)
T ss_pred             cCChhhcCHHHHc
Confidence            4689999999863

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=237.07  Aligned_cols=166  Identities=29%  Similarity=0.412  Sum_probs=144.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .+.|++.++||+|.|+.||++.++     .++..+|+|++........ ..+.+.+|+.|.+.|+|||||++.+.+...+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~-----~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~   83 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHK-----TTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEES   83 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhc-----cchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccc
Confidence            467899999999999999999877     4566789998876655443 4567899999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEEEecCccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l~Dfg~s~~~  265 (282)
                      ..|||+|++.|++|..-+.....+++..+..+++||+.+|.|+|.++|||||+||+|+|+...   .-|||+|||++...
T Consensus        84 ~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l  163 (355)
T KOG0033|consen   84 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV  163 (355)
T ss_pred             eeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence            999999999999997777666778999999999999999999999999999999999999754   34999999999643


Q ss_pred             ccc------hhheeeccCccc
Q 023430          266 LCC------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~------~~~~~~~ape~~  280 (282)
                      -..      .|+|.|||||++
T Consensus       164 ~~g~~~~G~~GtP~fmaPEvv  184 (355)
T KOG0033|consen  164 NDGEAWHGFAGTPGYLSPEVL  184 (355)
T ss_pred             CCccccccccCCCcccCHHHh
Confidence            311      679999999987

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.5e-32  Score=240.28  Aligned_cols=161  Identities=38%  Similarity=0.717  Sum_probs=141.4

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+++++     ..+..||+|++.+.........+.+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELK-----GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence            36999999999999976     35678999999876544455566677899999888 6999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC------  268 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~------  268 (282)
                      ||+++|+|..++.+.+.+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++......      
T Consensus        76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (318)
T cd05570          76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST  155 (318)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence            99999999999988888999999999999999999999999999999999999999999999999998642221      


Q ss_pred             -hhheeeccCcccc
Q 023430          269 -FFFFLFLGGGVFN  281 (282)
Q Consensus       269 -~~~~~~~ape~~~  281 (282)
                       .|++.|||||.+.
T Consensus       156 ~~g~~~y~aPE~~~  169 (318)
T cd05570         156 FCGTPDYIAPEILS  169 (318)
T ss_pred             eecCccccCHHHhc
Confidence             4789999999873

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-34  Score=253.43  Aligned_cols=163  Identities=20%  Similarity=0.269  Sum_probs=143.1

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |.-++.||.|+||.||.|++.     .+..+||||++........+..+.+..|+..|++++|||+|.+.|+|..+...|
T Consensus        28 f~dLrEIGHGSFGAVYfArd~-----~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaW  102 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAW  102 (948)
T ss_pred             HHHHHHhcCCccceeEEeecc-----CccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHH
Confidence            556788999999999999976     567789999998777666677778899999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc---cc
Q 023430          192 LILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ---LC  267 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~---~~  267 (282)
                      ||||||-| +-.+++.- ++++.+.++..|+.+.+.||.|||+.+.||||||..|||+.+.|.|||+|||.+...   ..
T Consensus       103 LVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAns  181 (948)
T KOG0577|consen  103 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANS  181 (948)
T ss_pred             HHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhc
Confidence            99999976 55566543 456899999999999999999999999999999999999999999999999988632   22


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      =.|||-|||||++
T Consensus       182 FvGTPywMAPEVI  194 (948)
T KOG0577|consen  182 FVGTPYWMAPEVI  194 (948)
T ss_pred             ccCCccccchhHh
Confidence            2789999999986

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.9e-32  Score=233.43  Aligned_cols=165  Identities=36%  Similarity=0.580  Sum_probs=142.7

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|++.++||+|+||.||++.+.     .++..||+|++.............+.+|+.+++.++|+||+++++.+..++.+
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEc-----CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeE
Confidence            4889999999999999999876     35678999999765443333345567899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          191 YLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ++||||+++|+|..++...  ..+++..+..++.|++.||.|||+.+|+||||||+||++++++.++|+|||++....  
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence            9999999999998887653  358999999999999999999999999999999999999999999999999986421  


Q ss_pred             ----cchhheeeccCccc
Q 023430          267 ----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ----~~~~~~~~~ape~~  280 (282)
                          ...|+..|||||.+
T Consensus       156 ~~~~~~~~~~~y~aPE~~  173 (285)
T cd05605         156 ETIRGRVGTVGYMAPEVV  173 (285)
T ss_pred             CccccccCCCCccCcHHh
Confidence                12568999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.5e-34  Score=231.45  Aligned_cols=168  Identities=24%  Similarity=0.365  Sum_probs=145.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-----hhhhHHHHHHHHHHHHHhc-CCCCeeeeeE
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-----IKKNHVDYMKAERDILTKV-THPFIVQLRY  182 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~  182 (282)
                      ...|+-.+.||+|..++|.+|.++     .+++.+|+|++.....     .....++.-.+|+.||+++ .||+|+++.+
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k-----~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D   90 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHK-----ETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD   90 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhc-----ccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence            346777889999999999998877     4566789998864321     1223345567899999997 5999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +|+++..+++|+|+|+.|.|++++...-.+++.+.+.+++|++.|+.|||.++||||||||+|||+|++.+++|+|||+|
T Consensus        91 ~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa  170 (411)
T KOG0599|consen   91 VYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFA  170 (411)
T ss_pred             eccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEecccee
Confidence            99999999999999999999999999888999999999999999999999999999999999999999999999999999


Q ss_pred             cc-----cccc-hhheeeccCcccc
Q 023430          263 HN-----QLCC-FFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~-----~~~~-~~~~~~~ape~~~  281 (282)
                      ..     .+.+ .|||+|+|||.+.
T Consensus       171 ~~l~~GekLrelCGTPgYLAPEtik  195 (411)
T KOG0599|consen  171 CQLEPGEKLRELCGTPGYLAPETIK  195 (411)
T ss_pred             eccCCchhHHHhcCCCcccChhhee
Confidence            63     2222 8999999999873

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=4.7e-32  Score=238.71  Aligned_cols=167  Identities=24%  Similarity=0.332  Sum_probs=145.9

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||++.++     ..+..+|+|++....  .....+.+.+|+++++.++|+||+++++++...
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~-----~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   75 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHK-----PSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD   75 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEEC-----CCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC
Confidence            4578999999999999999999976     356679999886542  223345688999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      +.+|+||||+++++|.+++...+.+++..+..++.|++.||.|||++ +|+||||||+|||++.++.++|+|||++....
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~  155 (333)
T cd06650          76 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (333)
T ss_pred             CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence            99999999999999999998878899999999999999999999975 79999999999999999999999999986432


Q ss_pred             c-----chhheeeccCcccc
Q 023430          267 C-----CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~-----~~~~~~~~ape~~~  281 (282)
                      .     ..|+..|+|||.+.
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~  175 (333)
T cd06650         156 DSMANSFVGTRSYMSPERLQ  175 (333)
T ss_pred             hhccccCCCCccccCHHHhc
Confidence            2     15789999999863

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.8e-32  Score=245.07  Aligned_cols=175  Identities=18%  Similarity=0.227  Sum_probs=144.4

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRY  182 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~  182 (282)
                      .+.+..++|++.+.||+|+||.||+|++.+......+..||+|+++....  ....+.+.+|+.+|+.+ +||||+++++
T Consensus        29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~  106 (375)
T cd05104          29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLG  106 (375)
T ss_pred             ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeee
Confidence            34455668999999999999999999865443445667899999865432  22345678899999999 7999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcC----------------------------------------------------
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQG----------------------------------------------------  210 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------  210 (282)
                      ++...+..++|||||++|+|..++....                                                    
T Consensus       107 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  186 (375)
T cd05104         107 ACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKR  186 (375)
T ss_pred             eeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccc
Confidence            9999999999999999999998886421                                                    


Q ss_pred             -----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          211 -----------------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       211 -----------------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                                             .+++..+..++.||+.||.|||+++|+||||||+|||++.++.++|+|||+++....
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~  266 (375)
T cd05104         187 RSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRN  266 (375)
T ss_pred             cccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence                                   367788899999999999999999999999999999999999999999999864322


Q ss_pred             c---------hhheeeccCccc
Q 023430          268 C---------FFFFLFLGGGVF  280 (282)
Q Consensus       268 ~---------~~~~~~~ape~~  280 (282)
                      .         .++..|||||.+
T Consensus       267 ~~~~~~~~~~~~~~~y~aPE~~  288 (375)
T cd05104         267 DSNYVVKGNARLPVKWMAPESI  288 (375)
T ss_pred             cccccccCCCCCCcceeChhHh
Confidence            1         124579999986

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3.9e-32  Score=244.35  Aligned_cols=176  Identities=20%  Similarity=0.261  Sum_probs=146.9

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeee
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLR  181 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~  181 (282)
                      ..+.+..++|+++++||+|+||.||+|.+...........||||++....  .....+.+.+|+.+|+.+. ||||++++
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~  107 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLL  107 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEE
Confidence            34556677899999999999999999998655444455679999986543  2233456889999999996 99999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhc----------------------------------------------------
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQ----------------------------------------------------  209 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------------------------------------------------  209 (282)
                      +++...+..|||||||++|+|.+++...                                                    
T Consensus       108 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (400)
T cd05105         108 GACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQ  187 (400)
T ss_pred             EEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccc
Confidence            9999999999999999999998887542                                                    


Q ss_pred             --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          210 --------------------------------------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       210 --------------------------------------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                                                                  ..+++..+..++.|++.||.|||+++|+||||||+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~N  267 (400)
T cd05105         188 YVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARN  267 (400)
T ss_pred             cchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHh
Confidence                                                        136777888999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      ||++.++.+||+|||++.....+         .++..|||||.+
T Consensus       268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  311 (400)
T cd05105         268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI  311 (400)
T ss_pred             EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhh
Confidence            99999999999999998643221         346789999976

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2.8e-32  Score=234.75  Aligned_cols=165  Identities=25%  Similarity=0.405  Sum_probs=141.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|+++     .++..||+|++..... .....+.+.+|+.+++.++|+||+++++++...+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHK-----ETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGK   74 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEEC-----CCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCE
Confidence            47999999999999999999987     3567899999876432 22334567789999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      .|+||||++++.+..+......+++..++.++.|++.||.|||+++|+||||||+|||++.++.++|+|||++....   
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          75 LYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence            99999999998776555445668999999999999999999999999999999999999999999999999986421   


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...|+..|+|||++
T Consensus       155 ~~~~~~~~~~~~y~aPE~~  173 (287)
T cd07848         155 NANYTEYVATRWYRSPELL  173 (287)
T ss_pred             cccccccccccccCCcHHH
Confidence                 12578899999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.5e-33  Score=245.89  Aligned_cols=166  Identities=27%  Similarity=0.431  Sum_probs=147.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|+.++++|+|+||.++.++++.     ....|++|.+.......+. .+....|+.+++++.|||||.+++.|..++
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~-----~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~   76 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKS-----DDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDG   76 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhcc-----CCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCC
Confidence            3689999999999999999999873     4568999999877654444 335677999999999999999999999988


Q ss_pred             E-EEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          189 K-LYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ~-~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      . ++|||+||+||+|.+.+.+++  .+++..+..|+.|++.|+.|||+++|+|||||+.||++..++.|+|.|||+|+..
T Consensus        77 ~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l  156 (426)
T KOG0589|consen   77 QLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL  156 (426)
T ss_pred             ceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence            8 999999999999999998754  5899999999999999999999999999999999999999999999999999854


Q ss_pred             ccc-------hhheeeccCccc
Q 023430          266 LCC-------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~-------~~~~~~~ape~~  280 (282)
                      ..+       .||+-||.||.|
T Consensus       157 ~~~~~~a~tvvGTp~YmcPEil  178 (426)
T KOG0589|consen  157 NPEDSLASTVVGTPYYMCPEIL  178 (426)
T ss_pred             CCchhhhheecCCCcccCHHHh
Confidence            444       679999999987

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=4.1e-32  Score=239.04  Aligned_cols=163  Identities=18%  Similarity=0.324  Sum_probs=138.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC---
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR---  187 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~---  187 (282)
                      +|++.++||+|+||.||+|+++     .++..||||++..... .......+.+|+.+++.++||||+++++++...   
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   74 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDT-----HTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR   74 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEEC-----CCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC
Confidence            5899999999999999999976     4567899999864322 222334577899999999999999999887543   


Q ss_pred             --CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 --SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                        ..+|+|||||. ++|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        75 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          75 EFKDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence              25899999995 689888888778999999999999999999999999999999999999999999999999998643


Q ss_pred             cc----------chhheeeccCccc
Q 023430          266 LC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~----------~~~~~~~~ape~~  280 (282)
                      ..          ..|++.|||||++
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~~  178 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPELC  178 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHHH
Confidence            21          2578999999976

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=4.9e-32  Score=232.82  Aligned_cols=159  Identities=36%  Similarity=0.577  Sum_probs=137.0

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEecc
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFI  197 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  197 (282)
                      ||+|+||+||++.++     .+++.||+|++.+.........+.+..|+.+++.++|+||+++.+++......|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMR-----ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEc-----cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC
Confidence            699999999999876     456789999997665444444566778999999999999999999999999999999999


Q ss_pred             CCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc------
Q 023430          198 NGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC------  267 (282)
Q Consensus       198 ~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~------  267 (282)
                      ++|+|..++..    ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++.....      
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  155 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK  155 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence            99999877743    34589999999999999999999999999999999999999999999999999853211      


Q ss_pred             -chhheeeccCcccc
Q 023430          268 -CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 -~~~~~~~~ape~~~  281 (282)
                       ..|++.|||||.+.
T Consensus       156 ~~~g~~~y~aPE~~~  170 (280)
T cd05608         156 GYAGTPGFMAPELLQ  170 (280)
T ss_pred             ccCCCcCccCHHHhc
Confidence             15689999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.98  E-value=1.3e-31  Score=246.52  Aligned_cols=165  Identities=21%  Similarity=0.257  Sum_probs=139.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ..|.+.+.||+|+||.||+|.....    .+..||+|.+....   ......+.+|+.+|+.++||||+++++++...+.
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~----~~~~vv~K~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~  139 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSD----PKEKVVAKFVMLND---ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDK  139 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCC----CCeEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCE
Confidence            3599999999999999999986532    24568888764432   2334567789999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          190 LYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      +||||||+++|+|.+++..    ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~  219 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQY  219 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence            9999999999999887753    345889999999999999999999999999999999999999999999999999642


Q ss_pred             cc---------chhheeeccCcccc
Q 023430          266 LC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~---------~~~~~~~~ape~~~  281 (282)
                      ..         ..|++.|||||++.
T Consensus       220 ~~~~~~~~~~~~~gt~~y~aPE~~~  244 (478)
T PTZ00267        220 SDSVSLDVASSFCGTPYYLAPELWE  244 (478)
T ss_pred             CCccccccccccCCCccccCHhHhC
Confidence            11         14799999999863

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.98  E-value=2.5e-31  Score=253.14  Aligned_cols=168  Identities=36%  Similarity=0.562  Sum_probs=149.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.++||+|+||.||+|.+.     ..++.||||+++............+..|+.+++.++|+||+++++++....
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~   77 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKK-----NNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN   77 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC
Confidence            468999999999999999999976     356789999998765444555667889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .+||||||+.+++|..++...+.+++..++.++.||+.||.|||.++||||||||+||||+.++.++|+|||+++...  
T Consensus        78 ~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~  157 (669)
T cd05610          78 NVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNR  157 (669)
T ss_pred             EEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCC
Confidence            999999999999999999887889999999999999999999999999999999999999999999999999997433  


Q ss_pred             -----cchhheeeccCcccc
Q 023430          267 -----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -----~~~~~~~~~ape~~~  281 (282)
                           ...+++.|++||...
T Consensus       158 ~~~~~~~~~t~~~~~pe~~~  177 (669)
T cd05610         158 ELNMMDILTTPSMAKPKNDY  177 (669)
T ss_pred             cccccccccCccccCccccc
Confidence                 236699999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.98  E-value=2.9e-32  Score=222.20  Aligned_cols=167  Identities=25%  Similarity=0.349  Sum_probs=139.7

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQ  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~  185 (282)
                      ..+++.+++..||.|+.|.||+++++     .++.+.|||.+++..  ..++.+++...+.++... ++|+||+.+|+|.
T Consensus        89 ~dindl~~l~dlGsGtcG~V~k~~~r-----s~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi  161 (391)
T KOG0983|consen   89 ADINDLENLGDLGSGTCGQVWKMRFR-----STGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFI  161 (391)
T ss_pred             cChHHhhhHHhhcCCCccceEEEEEc-----ccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence            44567778889999999999999988     467899999998765  455667787788776555 4999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .+..++|.||.|.. -+..++.+ ++.++|..+-.+...++.||.||.+ ++|||||+||+|||+|+.|++|+||||+|.
T Consensus       162 ~n~dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsG  240 (391)
T KOG0983|consen  162 TNTDVFICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISG  240 (391)
T ss_pred             eCchHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccc
Confidence            99999999999853 23333333 5678999889999999999999985 589999999999999999999999999997


Q ss_pred             ccccc------hhheeeccCcccc
Q 023430          264 NQLCC------FFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~~------~~~~~~~ape~~~  281 (282)
                      ..+..      .||+.|||||.++
T Consensus       241 rlvdSkAhtrsAGC~~YMaPERid  264 (391)
T KOG0983|consen  241 RLVDSKAHTRSAGCAAYMAPERID  264 (391)
T ss_pred             eeecccccccccCCccccCccccC
Confidence            55444      8999999999985

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.98  E-value=1.3e-32  Score=232.43  Aligned_cols=157  Identities=27%  Similarity=0.482  Sum_probs=131.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS--  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--  188 (282)
                      .|+-.+++|.|+||.||+|....     +++.+|||++-.+..       .-.+|.++|+.++|||||++..+|....  
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e-----~~~~vAIKKv~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~   92 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRE-----TEEEVAIKKVLQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTES   92 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcC-----CCceeEEEEecCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCC
Confidence            58888999999999999999874     467899998865432       1346999999999999999988775432  


Q ss_pred             ---EEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-CcEEEEecC
Q 023430          189 ---KLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-GHVMAAHSL  260 (282)
Q Consensus       189 ---~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-~~v~l~Dfg  260 (282)
                         .+.+||||++. +|...++.    +..++...++.+..||++||.|||+.||+||||||.|+|+|.+ |.+||||||
T Consensus        93 d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFG  171 (364)
T KOG0658|consen   93 DEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFG  171 (364)
T ss_pred             chhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCC
Confidence               35689999976 78887764    4678999999999999999999999999999999999999976 999999999


Q ss_pred             cccccccc----hh--heeeccCccc
Q 023430          261 NSHNQLCC----FF--FFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~~----~~--~~~~~ape~~  280 (282)
                      .|+..+..    .|  +.-|=|||.+
T Consensus       172 SAK~L~~~epniSYicSRyYRaPELi  197 (364)
T KOG0658|consen  172 SAKVLVKGEPNISYICSRYYRAPELI  197 (364)
T ss_pred             cceeeccCCCceeEEEeccccCHHHH
Confidence            99865544    33  7778899865

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.98  E-value=3.4e-31  Score=228.63  Aligned_cols=166  Identities=40%  Similarity=0.652  Sum_probs=148.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||++.+.     ..++.+|+|++...........+.+.+|+++++.++||||+++++.+.....
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   75 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHK-----GSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSN   75 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEc-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCe
Confidence            37999999999999999999976     3567899999977654444556678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-  268 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-  268 (282)
                      .|+||||+++++|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...... 
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~  155 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT  155 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC
Confidence            9999999999999999988888999999999999999999999999999999999999999999999999998753322 


Q ss_pred             ---hhheeeccCccc
Q 023430          269 ---FFFFLFLGGGVF  280 (282)
Q Consensus       269 ---~~~~~~~ape~~  280 (282)
                         .+++.|+|||.+
T Consensus       156 ~~~~~~~~y~aPE~~  170 (290)
T cd05580         156 YTLCGTPEYLAPEII  170 (290)
T ss_pred             CCCCCCccccChhhh
Confidence               568899999976

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.98  E-value=2.3e-31  Score=226.85  Aligned_cols=169  Identities=18%  Similarity=0.202  Sum_probs=143.4

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ...+|++.+.||+|+||.||+|.++..  ......||+|.++....  ....+.+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   78 (266)
T cd05064           3 DNKSIKIERILGTGRFGELCRGCLKLP--SKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRG   78 (266)
T ss_pred             chHHeEEeeeecccCCCeEEEEEEecC--CCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC
Confidence            346799999999999999999986532  23456799999876432  23345688899999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      +..++||||+++|+|.+++... ..+++..++.++.|++.||.|||+++++||||||+|||++.++.++++|||.+....
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~  158 (266)
T cd05064          79 NTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK  158 (266)
T ss_pred             CCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence            9999999999999999988764 468999999999999999999999999999999999999999999999999875432


Q ss_pred             cc--------hhheeeccCccc
Q 023430          267 CC--------FFFFLFLGGGVF  280 (282)
Q Consensus       267 ~~--------~~~~~~~ape~~  280 (282)
                      ..        .++..|+|||.+
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~  180 (266)
T cd05064         159 SEAIYTTMSGKSPVLWAAPEAI  180 (266)
T ss_pred             ccchhcccCCCCceeecCHHHH
Confidence            21        235789999976

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.98  E-value=1.2e-32  Score=228.71  Aligned_cols=158  Identities=28%  Similarity=0.401  Sum_probs=139.2

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+|+.|-.|...     .++..||||++.+..   ...+.++.+|++++..++ |+||++|+++|+++..+||||
T Consensus        84 e~LGeGAyasVqtcv~i-----~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf  155 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSI-----QTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF  155 (463)
T ss_pred             HHhcCccceeeeeeeee-----ccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence            57999999999988766     467789999998763   455667889999999986 999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc---EEEEecCcccccc-----
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH---VMAAHSLNSHNQL-----  266 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~---v~l~Dfg~s~~~~-----  266 (282)
                      |-|.||.|..+|.++..|++.++..++.+|+.||+|||.+||.||||||+|||....++   ||||||-+.....     
T Consensus       156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~  235 (463)
T KOG0607|consen  156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC  235 (463)
T ss_pred             ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence            99999999999999999999999999999999999999999999999999999976654   7999997764322     


Q ss_pred             --------cc-hhheeeccCcccc
Q 023430          267 --------CC-FFFFLFLGGGVFN  281 (282)
Q Consensus       267 --------~~-~~~~~~~ape~~~  281 (282)
                              .. .|+..|||||+.+
T Consensus       236 spastP~L~tPvGSAEfMAPEVVd  259 (463)
T KOG0607|consen  236 SPASTPELLTPVGSAEFMAPEVVD  259 (463)
T ss_pred             CCCCCccccCcccchhhcchhHHh
Confidence                    11 7899999999864

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=2.3e-32  Score=252.00  Aligned_cols=175  Identities=21%  Similarity=0.328  Sum_probs=153.0

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+...+.+..+.||+|.||+||+|+..+.........||||.++...  +....+.|++|+++|..++|||||+|+|++.
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~  559 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCR  559 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence            35566778889999999999999998877766788889999998764  3446678999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc----------C----CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ----------G----IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~----------~----~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~  251 (282)
                      .++.+++|+|||..|+|.++|...          .    .++..+.+.|+.||+.||+||-++.+|||||.++|+||.++
T Consensus       560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~  639 (774)
T KOG1026|consen  560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN  639 (774)
T ss_pred             cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence            999999999999999999998642          1    27788999999999999999999999999999999999999


Q ss_pred             CcEEEEecCcccccccchh---------heeeccCccccC
Q 023430          252 GHVMAAHSLNSHNQLCCFF---------FFLFLGGGVFNF  282 (282)
Q Consensus       252 ~~v~l~Dfg~s~~~~~~~~---------~~~~~ape~~~~  282 (282)
                      ..|||+|||+|+.....+|         -.+||+||.+-|
T Consensus       640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly  679 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY  679 (774)
T ss_pred             eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc
Confidence            9999999999986544422         568999998743

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-32  Score=227.32  Aligned_cols=173  Identities=35%  Similarity=0.692  Sum_probs=160.4

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      ..+.++..+|.++++||+|+|++|.+++++     .+.++||+|+++++...+.+..++.+.|-.+.... +||.+|-+.
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~-----~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglh  317 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLK-----KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLH  317 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhheehc-----ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehh
Confidence            456678899999999999999999999987     56789999999999888888888899898888776 599999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      .+|.++..+++|.||++||+|..++.++..+++..++.+...|+.||.|||++|||.||||.+|+|+|.+|++|+.|+|.
T Consensus       318 scfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygm  397 (593)
T KOG0695|consen  318 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGM  397 (593)
T ss_pred             hhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc-------hhheeeccCccc
Q 023430          262 SHNQLCC-------FFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~~-------~~~~~~~ape~~  280 (282)
                      |+..+.+       .||+-|+|||++
T Consensus       398 cke~l~~gd~tstfcgtpnyiapeil  423 (593)
T KOG0695|consen  398 CKEGLGPGDTTSTFCGTPNYIAPEIL  423 (593)
T ss_pred             hhcCCCCCcccccccCCCcccchhhh
Confidence            9876655       679999999987

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.97  E-value=3.5e-31  Score=253.13  Aligned_cols=166  Identities=21%  Similarity=0.241  Sum_probs=142.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.++||+|+||.||+|.+.     ..++.||+|++...........+++.+|+.+++.++||||+++++++...+.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~-----~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDP-----VCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEEC-----CCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCE
Confidence            68999999999999999999876     3567899999976543334445678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEe
Q 023430          190 LYLILDFINGGHLFFHLYRQ-----------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                      .|++|||++|++|.+++...           ..++...+..++.|++.||.|||++||+||||||+|||++.+|.++|+|
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD  156 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD  156 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence            99999999999999888641           2245567788999999999999999999999999999999999999999


Q ss_pred             cCcccccc-------------------------cchhheeeccCccc
Q 023430          259 SLNSHNQL-------------------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~-------------------------~~~~~~~~~ape~~  280 (282)
                      ||++....                         .-.|++.|||||.+
T Consensus       157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l  203 (932)
T PRK13184        157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERL  203 (932)
T ss_pred             cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHh
Confidence            99986431                         01479999999976

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.97  E-value=4.8e-31  Score=227.32  Aligned_cols=166  Identities=36%  Similarity=0.587  Sum_probs=143.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|++.+.||+|+||.||++.++     .+++.||+|.+...........+.+.+|+.+++.++|+||+.+++.+...+..
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~   75 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEc-----CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEE
Confidence            3778899999999999999987     45678999998765443333345567899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ---  265 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~---  265 (282)
                      |+||||+++++|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++...   
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence            9999999999998888543  34889999999999999999999999999999999999999999999999998532   


Q ss_pred             ---ccchhheeeccCcccc
Q 023430          266 ---LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ---~~~~~~~~~~ape~~~  281 (282)
                         ....|+..|||||.++
T Consensus       156 ~~~~~~~g~~~y~aPE~~~  174 (285)
T cd05630         156 QTIKGRVGTVGYMAPEVVK  174 (285)
T ss_pred             ccccCCCCCccccChHHHc
Confidence               1236789999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=8.6e-32  Score=236.28  Aligned_cols=159  Identities=29%  Similarity=0.392  Sum_probs=138.7

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      ++||.|.||+||-|+++     .+++-||||++.+.+...+.. ..+++|+.||+.+.||.||.+...|++.+.+++|||
T Consensus       570 evLGSGQFG~VYgg~hR-----ktGrdVAvKvIdKlrFp~kqe-sqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVME  643 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHR-----KTGRDVAVKVIDKLRFPTKQE-SQLRNEVAILQNLHHPGIVNLECMFETPERVFVVME  643 (888)
T ss_pred             hhccCCcceeeecceec-----ccCceeeeeeeecccCCCchH-HHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEeh
Confidence            68999999999999988     577889999998877655443 679999999999999999999999999999999999


Q ss_pred             ccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEEEecCcccccccc---
Q 023430          196 FINGGHLFFHLY-RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMAAHSLNSHNQLCC---  268 (282)
Q Consensus       196 ~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l~Dfg~s~~~~~~---  268 (282)
                      .+.|.-|.-.+. +.+++++.....++.||+.||.|||.++|+|+||||+|||+.+.   -.|||||||.++..-..   
T Consensus       644 Kl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR  723 (888)
T KOG4236|consen  644 KLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR  723 (888)
T ss_pred             hhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence            997655544443 35789999999999999999999999999999999999999765   35999999999743332   


Q ss_pred             ---hhheeeccCccc
Q 023430          269 ---FFFFLFLGGGVF  280 (282)
Q Consensus       269 ---~~~~~~~ape~~  280 (282)
                         .||++|+|||+|
T Consensus       724 rsVVGTPAYLaPEVL  738 (888)
T KOG4236|consen  724 RSVVGTPAYLAPEVL  738 (888)
T ss_pred             hhhcCCccccCHHHH
Confidence               889999999997

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.97  E-value=6.4e-31  Score=226.47  Aligned_cols=165  Identities=35%  Similarity=0.584  Sum_probs=142.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|+..+.||+|+||+||++.+.     ..++.+|+|++.............+.+|+++++.++|+||+.+++.+..++..
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~   75 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVR-----ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEE
Confidence            3778899999999999999876     35678999998765443333445577899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          191 YLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      +++|||+++++|..++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....  
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence            9999999999998887653  358999999999999999999999999999999999999999999999999885321  


Q ss_pred             ----cchhheeeccCccc
Q 023430          267 ----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ----~~~~~~~~~ape~~  280 (282)
                          ...|+..|||||.+
T Consensus       156 ~~~~~~~g~~~~~aPE~~  173 (285)
T cd05632         156 ESIRGRVGTVGYMAPEVL  173 (285)
T ss_pred             CcccCCCCCcCccChHHh
Confidence                12678999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-33  Score=250.84  Aligned_cols=163  Identities=28%  Similarity=0.453  Sum_probs=141.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      +.|+|+..||.|+||.||+|..+.     ++...|.|++...   ..+.++.+.-||+||..|+||+||+|++.|..++.
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nke-----t~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enk  103 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKE-----TKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENK  103 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhccc-----chhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCc
Confidence            457788899999999999998773     4455677777543   35566778889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc
Q 023430          190 LYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC  268 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~  268 (282)
                      +||+.|||.||-....+.. ...+.+.++..+++|++.||.|||+++|||||||..|||+.-+|.|+|+|||.|......
T Consensus       104 LwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t  183 (1187)
T KOG0579|consen  104 LWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST  183 (1187)
T ss_pred             eEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhH
Confidence            9999999999988766654 456999999999999999999999999999999999999999999999999999754433


Q ss_pred             -------hhheeeccCccc
Q 023430          269 -------FFFFLFLGGGVF  280 (282)
Q Consensus       269 -------~~~~~~~ape~~  280 (282)
                             .|||-|||||+.
T Consensus       184 ~qkRDsFIGTPYWMAPEVv  202 (1187)
T KOG0579|consen  184 RQKRDSFIGTPYWMAPEVV  202 (1187)
T ss_pred             HhhhccccCCcccccchhe
Confidence                   679999999985

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=2.1e-30  Score=238.12  Aligned_cols=163  Identities=21%  Similarity=0.327  Sum_probs=132.6

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC------CCeeeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH------PFIVQLR  181 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~l~  181 (282)
                      ..++|+++++||+|+||+||+|.+.     ..++.||||+++...    ...+.+..|+.+++.++|      .+|++++
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~-----~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~  197 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDR-----KRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQ  197 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEc-----CCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeE
Confidence            3578999999999999999999876     356789999986432    112334557777766654      4588888


Q ss_pred             EEEEeC-CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCC-------
Q 023430          182 YSFQTR-SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDG-------  252 (282)
Q Consensus       182 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~-------  252 (282)
                      ++|... ..+|+|||++ +++|.+++.+.+.+++..+..++.||+.||.|||. .|||||||||+|||++.++       
T Consensus       198 ~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~  276 (467)
T PTZ00284        198 RYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVT  276 (467)
T ss_pred             EEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccc
Confidence            888754 5789999988 67888888888889999999999999999999998 5999999999999998766       


Q ss_pred             ---------cEEEEecCcccccc----cchhheeeccCccc
Q 023430          253 ---------HVMAAHSLNSHNQL----CCFFFFLFLGGGVF  280 (282)
Q Consensus       253 ---------~v~l~Dfg~s~~~~----~~~~~~~~~ape~~  280 (282)
                               .+||+|||++....    ...||+.|||||++
T Consensus       277 ~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~  317 (467)
T PTZ00284        277 NRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVV  317 (467)
T ss_pred             ccccCCCCceEEECCCCccccCccccccccCCccccCcHHh
Confidence                     49999999885422    23679999999986

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-32  Score=242.43  Aligned_cols=162  Identities=23%  Similarity=0.253  Sum_probs=143.2

Q ss_pred             hhhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeee
Q 023430          102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLR  181 (282)
Q Consensus       102 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~  181 (282)
                      ...|.+..+...-++.||.|+-|.||+++.+       ++.||||+++.-          -..+|+-|++|+|+||+.|.
T Consensus       116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~-------netVAVKKV~el----------kETdIKHLRkLkH~NII~Fk  178 (904)
T KOG4721|consen  116 EELWEIPFEEISELEWLGSGAQGAVFLGRLH-------NETVAVKKVREL----------KETDIKHLRKLKHPNIITFK  178 (904)
T ss_pred             hhhccCCHHHhhhhhhhccCcccceeeeecc-------CceehhHHHhhh----------hhhhHHHHHhccCcceeeEe
Confidence            3456676667777889999999999999865       456999987432          12478899999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      |+|.....+|||||||..|.|+..|+....+.......|..+|+.||.|||.+.|||||||.-||||..+..|||+|||.
T Consensus       179 GVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGT  258 (904)
T KOG4721|consen  179 GVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGT  258 (904)
T ss_pred             eeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccc
Confidence            99999999999999999999999999888899999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc------hhheeeccCccc
Q 023430          262 SHNQLCC------FFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~~------~~~~~~~ape~~  280 (282)
                      |+....-      .||..|||||++
T Consensus       259 S~e~~~~STkMSFaGTVaWMAPEvI  283 (904)
T KOG4721|consen  259 SKELSDKSTKMSFAGTVAWMAPEVI  283 (904)
T ss_pred             hHhhhhhhhhhhhhhhHhhhCHHHh
Confidence            9854332      679999999987

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.4e-33  Score=236.90  Aligned_cols=171  Identities=36%  Similarity=0.674  Sum_probs=154.6

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQ  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~  185 (282)
                      +...+|..+.+||+|+||+|.++..++     +..+||||+++++.+...+.++.-..|-++|.... -|.+++++.+|.
T Consensus       346 i~~tDFnFl~VlGKGSFGKVlLaerkg-----tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ  420 (683)
T KOG0696|consen  346 IKATDFNFLMVLGKGSFGKVLLAERKG-----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ  420 (683)
T ss_pred             eeecccceEEEeccCccceeeeecccC-----cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh
Confidence            445689999999999999999999875     56789999999988777777776677888887764 678999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      +-+.+|+||||+.||+|.-.+..-+.+.+..+..++..|+.||-|||++|||.||||.+|||||.+|+|||+|||+|+..
T Consensus       421 TmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  421 TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             hhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc
Confidence            99999999999999999999988899999999999999999999999999999999999999999999999999999977


Q ss_pred             ccc-------hhheeeccCccccC
Q 023430          266 LCC-------FFFFLFLGGGVFNF  282 (282)
Q Consensus       266 ~~~-------~~~~~~~ape~~~~  282 (282)
                      +-+       .||+-|||||++.|
T Consensus       501 i~~~~TTkTFCGTPdYiAPEIi~Y  524 (683)
T KOG0696|consen  501 IFDGVTTKTFCGTPDYIAPEIIAY  524 (683)
T ss_pred             ccCCcceeeecCCCcccccceEEe
Confidence            665       78999999999865

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.97  E-value=7.9e-31  Score=224.98  Aligned_cols=158  Identities=32%  Similarity=0.566  Sum_probs=135.2

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEecc
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFI  197 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  197 (282)
                      ||+|+||.||+++.+     ..++.||+|.+.............+..|+++++.++||||+++++.+......|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVK-----NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEc-----cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC
Confidence            699999999999877     457789999987654333333344567999999999999999999999999999999999


Q ss_pred             CCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc------ccch
Q 023430          198 NGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ------LCCF  269 (282)
Q Consensus       198 ~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~------~~~~  269 (282)
                      ++++|..++....  .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...      ....
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~  155 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA  155 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence            9999988876543  4788899999999999999999999999999999999999999999999988632      1236


Q ss_pred             hheeeccCccc
Q 023430          270 FFFLFLGGGVF  280 (282)
Q Consensus       270 ~~~~~~ape~~  280 (282)
                      |+..|+|||++
T Consensus       156 ~~~~y~aPE~~  166 (277)
T cd05607         156 GTNGYMAPEIL  166 (277)
T ss_pred             CCCCccCHHHH
Confidence            78999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.97  E-value=6.6e-31  Score=242.47  Aligned_cols=168  Identities=26%  Similarity=0.344  Sum_probs=141.4

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|.+.+.||+|+||.||+|++.     ..+..||||++..... .......+.+|+.++..++|+||++++..+...
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~-----~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~  103 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRV-----SDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK  103 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEc-----CCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence            3468999999999999999999876     4567899999876543 233455678899999999999999998776533


Q ss_pred             C--------EEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEE
Q 023430          188 S--------KLYLILDFINGGHLFFHLYRQ----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       188 ~--------~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~  255 (282)
                      .        .+++||||+++|+|.+++...    ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk  183 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK  183 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence            2        378999999999999988642    4588999999999999999999999999999999999999999999


Q ss_pred             EEecCccccccc---------chhheeeccCcccc
Q 023430          256 AAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       256 l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      |+|||+++....         -.|++.|||||.+.
T Consensus       184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~  218 (496)
T PTZ00283        184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWR  218 (496)
T ss_pred             EEecccCeeccccccccccccccCCcceeCHHHhC
Confidence            999999863211         14789999999874

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=2e-32  Score=259.27  Aligned_cols=166  Identities=25%  Similarity=0.386  Sum_probs=139.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|+.++.||+|+||.||+++++     -.++.||||+++...  .......+.+|+.+|.+|+|||||++|..|....
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNK-----lDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~  550 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNK-----LDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVEST  550 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeec-----ccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence            357888899999999999999988     567889999998765  3344556889999999999999999987773221


Q ss_pred             E-------------------------------------------------------------------------------
Q 023430          189 K-------------------------------------------------------------------------------  189 (282)
Q Consensus       189 ~-------------------------------------------------------------------------------  189 (282)
                      .                                                                               
T Consensus       551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~  630 (1351)
T KOG1035|consen  551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL  630 (1351)
T ss_pred             CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence            0                                                                               


Q ss_pred             ----------------------------------------EEEEEeccCCCchHHHHHhcCCC-CHHHHHHHHHHHHHHH
Q 023430          190 ----------------------------------------LYLILDFINGGHLFFHLYRQGIF-REDQARFYTAEIVSAV  228 (282)
Q Consensus       190 ----------------------------------------~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~i~~qi~~gL  228 (282)
                                                              +||-||||+.-.|.+++.++... ....+.++++||+.||
T Consensus       631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGL  710 (1351)
T KOG1035|consen  631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGL  710 (1351)
T ss_pred             ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHH
Confidence                                                    79999999998888877765443 4788899999999999


Q ss_pred             HHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-------------------------cchhheeeccCcccc
Q 023430          229 SHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-------------------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       229 ~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-------------------------~~~~~~~~~ape~~~  281 (282)
                      .|+|++|||||||||.||++++++.|||.|||++....                         ...||..|+|||.|.
T Consensus       711 aYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~  788 (1351)
T KOG1035|consen  711 AYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS  788 (1351)
T ss_pred             HHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence            99999999999999999999999999999999996511                         117899999999874

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.97  E-value=6.5e-31  Score=225.27  Aligned_cols=173  Identities=17%  Similarity=0.208  Sum_probs=142.9

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||++.+++......+..||+|++....  .......+.+|+.+++.++|+||+++++++..
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~   80 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ   80 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence            4456899999999999999999987754333456779999885432  12233457889999999999999999999998


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEE
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQG----------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMA  256 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l  256 (282)
                      ....++||||+++++|.+++....          .+++..+..++.|++.||.|||+++++||||||+|||+++++.++|
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence            899999999999999999886532          2467788899999999999999999999999999999999999999


Q ss_pred             EecCccccccc---------chhheeeccCcccc
Q 023430          257 AHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       257 ~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      +|||++.....         ..++..|||||.+.
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK  194 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhh
Confidence            99999864321         13366899999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.97  E-value=2.8e-31  Score=245.67  Aligned_cols=170  Identities=22%  Similarity=0.351  Sum_probs=144.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~  183 (282)
                      ..++..++++.+.|.+|+|+.||.|+...     .+..||+|++-..   ++..++.+.+||.+|+.|+ |+|||.|++.
T Consensus        32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~-----~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yids  103 (738)
T KOG1989|consen   32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVK-----GGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDS  103 (738)
T ss_pred             EEECCEEEEEEEEEccCCcEEEEEEEecC-----CCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEecc
Confidence            34556678999999999999999999763     3377999988654   5667788999999999997 9999999993


Q ss_pred             -EEe------CCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcCCC
Q 023430          184 -FQT------RSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDSDG  252 (282)
Q Consensus       184 -~~~------~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~~~  252 (282)
                       ...      .-.++|+||||.||.|.+++..  +..|.+.+++.|+.|+++|+.+||.+.  |||||||.+||||..+|
T Consensus       104 s~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g  183 (738)
T KOG1989|consen  104 SAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG  183 (738)
T ss_pred             ccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC
Confidence             221      1268899999999999999874  456999999999999999999999997  99999999999999999


Q ss_pred             cEEEEecCcccccccc----------------hhheeeccCccccC
Q 023430          253 HVMAAHSLNSHNQLCC----------------FFFFLFLGGGVFNF  282 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~~~----------------~~~~~~~ape~~~~  282 (282)
                      +.||||||.+...+..                +-|+.|=|||.+|+
T Consensus       184 ~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDl  229 (738)
T KOG1989|consen  184 NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDL  229 (738)
T ss_pred             CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhh
Confidence            9999999988533222                44999999999874

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=3.4e-32  Score=243.24  Aligned_cols=166  Identities=19%  Similarity=0.282  Sum_probs=138.6

Q ss_pred             CCe-EEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechh-hhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          110 GDF-EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDT-IIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y-~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ++| +...+||+|+|-+||+|.+.     ..+..||--.++... ......+++|..|+.+|+.|+|+||+++|++|.+.
T Consensus        39 gRy~k~~evLGrGafKtVYka~De-----~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~  113 (632)
T KOG0584|consen   39 GRYLKFDEVLGRGAFKTVYKAFDE-----EEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT  113 (632)
T ss_pred             Cceeehhhhcccccceeeeecccc-----ccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence            444 34478999999999999864     344445544333322 23345568899999999999999999999999876


Q ss_pred             CE--EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcC-CCcEEEEecCcc
Q 023430          188 SK--LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDS-DGHVMAAHSLNS  262 (282)
Q Consensus       188 ~~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~-~~~v~l~Dfg~s  262 (282)
                      ..  +.+|+|++..|+|..|+.+.+.+....++.|++||++||.|||++.  |||||||.+||+|+. .|.|||.|+|||
T Consensus       114 ~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA  193 (632)
T KOG0584|consen  114 DNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA  193 (632)
T ss_pred             CCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHH
Confidence            54  8899999999999999999999999999999999999999999986  999999999999985 599999999999


Q ss_pred             cc-----cccchhheeeccCccc
Q 023430          263 HN-----QLCCFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~-----~~~~~~~~~~~ape~~  280 (282)
                      +.     ...-.|||.|||||.+
T Consensus       194 tl~r~s~aksvIGTPEFMAPEmY  216 (632)
T KOG0584|consen  194 TLLRKSHAKSVIGTPEFMAPEMY  216 (632)
T ss_pred             HHhhccccceeccCccccChHHH
Confidence            63     2223899999999986

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1e-31  Score=226.57  Aligned_cols=164  Identities=20%  Similarity=0.311  Sum_probs=141.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe---
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT---  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---  186 (282)
                      ..|..++.||+|+||.|+.+.++     .++..||||++.... ......++..+|+.+|+.++|+||+.+++.+..   
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~-----~t~~~VAIKKi~~~F-~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~   95 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDK-----RTGEKVAIKKILNPF-ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR   95 (359)
T ss_pred             ceecccccccCcceeeEEEEEEc-----CCCCEeehhhhhhhh-hchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence            45666899999999999999987     456789999986433 344556677889999999999999999999876   


Q ss_pred             --CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 --RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                        -..+|+|+|+| +-+|...++.+..+.+..++.++.|+++||+|+|+.+|+||||||.|+|++.++.+||+|||+|+.
T Consensus        96 ~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~  174 (359)
T KOG0660|consen   96 DKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARY  174 (359)
T ss_pred             cccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceee
Confidence              24799999999 458888888777799999999999999999999999999999999999999999999999999986


Q ss_pred             cc----cc-----hhheeeccCccc
Q 023430          265 QL----CC-----FFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~----~~-----~~~~~~~ape~~  280 (282)
                      .-    ..     .-|.-|=|||.+
T Consensus       175 ~~~~~~~~~mTeYVaTRWYRAPEll  199 (359)
T KOG0660|consen  175 LDKFFEDGFMTEYVATRWYRAPELL  199 (359)
T ss_pred             ccccCcccchhcceeeeeecCHHHH
Confidence            52    22     228899999976

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.9e-30  Score=233.82  Aligned_cols=157  Identities=20%  Similarity=0.173  Sum_probs=135.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ...|.+.+.||+|+||.||++.+..     .+..||||....         ..+.+|+++|+.++|+|||++++++...+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~-----~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~  233 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPD-----YPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGG  233 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECC-----CCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECC
Confidence            4579999999999999999999773     456799996422         22567999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ..++|||++. ++|..++... ..+++.+++.++.|++.||.|||++|||||||||+|||++.++.++|+|||+++... 
T Consensus       234 ~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        234 LTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARG  312 (461)
T ss_pred             EEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence            9999999995 5787777653 468999999999999999999999999999999999999999999999999986321 


Q ss_pred             --------cchhheeeccCccc
Q 023430          267 --------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 --------~~~~~~~~~ape~~  280 (282)
                              ...|+..|||||.+
T Consensus       313 ~~~~~~~~~~~GT~~Y~APE~~  334 (461)
T PHA03211        313 SWSTPFHYGIAGTVDTNAPEVL  334 (461)
T ss_pred             ccccccccccCCCcCCcCHHHH
Confidence                    12479999999986

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=8.8e-31  Score=228.09  Aligned_cols=164  Identities=20%  Similarity=0.318  Sum_probs=139.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.+.||+|+||.||+|+.+     ..+..||+|.+.....  ......+.+|+.+++.++|+||+++++++..++
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   77 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSK-----LTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK   77 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEec-----CCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC
Confidence            467999999999999999999876     3566899999875432  122234667999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ..++||||+++ +|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.... 
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  156 (309)
T cd07872          78 SLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV  156 (309)
T ss_pred             eEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence            99999999986 777777654 447899999999999999999999999999999999999999999999999986421 


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...+++.|+|||.+
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~  176 (309)
T cd07872         157 PTKTYSNEVVTLWYRPPDVL  176 (309)
T ss_pred             CccccccccccccccCCHHH
Confidence                  12458899999976

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.97  E-value=5.9e-31  Score=236.70  Aligned_cols=176  Identities=19%  Similarity=0.269  Sum_probs=146.4

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRY  182 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~  182 (282)
                      .+.+..++|.+.+.||+|+||.||+|++++.........||+|++.....  ....+.+.+|+.+|..+. |+||+++++
T Consensus        31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~  108 (401)
T cd05107          31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLG  108 (401)
T ss_pred             cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence            45566678999999999999999999987654445567899999975432  223456788999999997 999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcC----------------------------------------------------
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQG----------------------------------------------------  210 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------  210 (282)
                      ++...+.+++||||+.+|+|.+++.+.+                                                    
T Consensus       109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (401)
T cd05107         109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD  188 (401)
T ss_pred             EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence            9999999999999999999999886531                                                    


Q ss_pred             ----------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCC
Q 023430          211 ----------------------------------------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPE  244 (282)
Q Consensus       211 ----------------------------------------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~  244 (282)
                                                                    .+++..++.++.|++.||.|||+++|+||||||+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~  268 (401)
T cd05107         189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAAR  268 (401)
T ss_pred             ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcc
Confidence                                                          2456678889999999999999999999999999


Q ss_pred             ceEEcCCCcEEEEecCccccccc---------chhheeeccCcccc
Q 023430          245 NILMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       245 NILl~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      |||++.++.++|+|||+++....         ..++..|||||.+.
T Consensus       269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  314 (401)
T cd05107         269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF  314 (401)
T ss_pred             eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc
Confidence            99999999999999999864221         13467899999763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.97  E-value=9.5e-31  Score=228.65  Aligned_cols=170  Identities=19%  Similarity=0.207  Sum_probs=140.5

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +...+|++.+.||+|+||.||+|++...+. .....||+|++....  .....+.+.+|+.+++.++|+||+++++++..
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~   80 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT   80 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEecCCC-ccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC
Confidence            456789999999999999999999764322 223458999986432  22344568889999999999999999998876


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      . ..++++||+++|+|.+++... ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++...
T Consensus        81 ~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          81 S-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (316)
T ss_pred             C-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence            4 578999999999999998764 45888999999999999999999999999999999999999999999999999743


Q ss_pred             ccc---------hhheeeccCccc
Q 023430          266 LCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~---------~~~~~~~ape~~  280 (282)
                      ..+         .++..|||||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~  183 (316)
T cd05108         160 GADEKEYHAEGGKVPIKWMALESI  183 (316)
T ss_pred             cCCCcceeccCCccceeecChHHh
Confidence            211         225679999976

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.97  E-value=2.8e-30  Score=224.54  Aligned_cols=166  Identities=36%  Similarity=0.572  Sum_probs=145.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||++.++     ..++.|++|.+...........+.+.+|+.+++.++|+||+++++.+..++.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   75 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHK-----ETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRH   75 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEEC-----CCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCE
Confidence            37999999999999999999977     3567899999876654344455678889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      +++||||++|++|..++...+.+++..+..++.|++.||.|||+++|+||||||+||+++.++.++++|||+++...   
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~  155 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL  155 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence            99999999999999999887889999999999999999999999999999999999999999999999999886311   


Q ss_pred             -------------------cchhheeeccCccc
Q 023430          267 -------------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -------------------~~~~~~~~~ape~~  280 (282)
                                         ...++..|+|||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  188 (305)
T cd05609         156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVI  188 (305)
T ss_pred             cccccccccccchhhccccCCccCccccCchhc
Confidence                               11357789999976

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=1.1e-30  Score=232.24  Aligned_cols=163  Identities=21%  Similarity=0.312  Sum_probs=136.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||++.+.     ..+..||+|++..... .......+.+|+.+++.++||||+++++++....
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   93 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDT-----VLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK   93 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEc-----CCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence            468999999999999999999876     4567899999865432 2233455778999999999999999999886543


Q ss_pred             ------EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 ------KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                            .+|+||||+.+ +|...+.  ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.++|+|||++
T Consensus        94 ~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a  170 (359)
T cd07876          94 SLEEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA  170 (359)
T ss_pred             CccccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence                  57999999976 4555553  34788999999999999999999999999999999999999999999999999


Q ss_pred             ccccc------chhheeeccCccc
Q 023430          263 HNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~------~~~~~~~~ape~~  280 (282)
                      .....      ..|++.|||||.+
T Consensus       171 ~~~~~~~~~~~~~~t~~y~aPE~~  194 (359)
T cd07876         171 RTACTNFMMTPYVVTRYYRAPEVI  194 (359)
T ss_pred             cccccCccCCCCcccCCCCCchhc
Confidence            64322      2568899999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=4.1e-31  Score=236.07  Aligned_cols=163  Identities=20%  Similarity=0.276  Sum_probs=138.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS--  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--  188 (282)
                      +|++.+.||+|+||.||++...     ..++.||+|++..... .....+.+.+|+.+++.++|+||+++++++....  
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   74 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDP-----RDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID   74 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEEC-----CCCCEEEEEecccccc-chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc
Confidence            4788899999999999999875     4567899998864321 2223456788999999999999999999998776  


Q ss_pred             ---EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          189 ---KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                         .+|+||||+. ++|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        75 ~~~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          75 PFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             ccceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence               7999999997 578888877778999999999999999999999999999999999999999999999999998643


Q ss_pred             cc--------chhheeeccCccc
Q 023430          266 LC--------CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~--------~~~~~~~~ape~~  280 (282)
                      ..        ..++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~~~~y~aPE~~  176 (372)
T cd07853         154 EPDESKHMTQEVVTQYYRAPEIL  176 (372)
T ss_pred             ccCccccCCCCCcCCCcCCHHHH
Confidence            22        1457889999976

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.3e-30  Score=231.69  Aligned_cols=158  Identities=20%  Similarity=0.280  Sum_probs=135.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|++.+.||+|+||.||+|++.     ..+..||+|+.....         ...|+.+++.++|+||+++++++....
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~~  130 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKP-----GQPDPVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLVSGA  130 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEEC-----CCCceEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEEeCC
Confidence            457999999999999999999976     345679999754322         345899999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..++|||++. ++|..++.. ...+++..++.++.||+.||.|||++|||||||||+|||++.++.++|+|||++.....
T Consensus       131 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  209 (357)
T PHA03209        131 ITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV  209 (357)
T ss_pred             eeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence            9999999996 477777754 45689999999999999999999999999999999999999999999999999964221


Q ss_pred             ------chhheeeccCcccc
Q 023430          268 ------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ------~~~~~~~~ape~~~  281 (282)
                            ..|+..|||||.+.
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~  229 (357)
T PHA03209        210 APAFLGLAGTVETNAPEVLA  229 (357)
T ss_pred             CcccccccccccccCCeecC
Confidence                  25789999999873

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.97  E-value=9.1e-31  Score=221.64  Aligned_cols=164  Identities=30%  Similarity=0.457  Sum_probs=143.6

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |++.+.||+|+||+||+++..     ..+..||+|++......... .....+|+.+++.++|+||+++++++......+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~   74 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNK-----KNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLY   74 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEET-----TTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEEC-----CCCeEEEEEEeccccccccc-cchhhhhhhcccccccccccccccccccccccc
Confidence            789999999999999999987     45668999999876543322 233455999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc---c---
Q 023430          192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN---Q---  265 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~---~---  265 (282)
                      +|||++++++|.+++.....+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||.+..   .   
T Consensus        75 ~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~  154 (260)
T PF00069_consen   75 IVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN  154 (260)
T ss_dssp             EEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999998778899999999999999999999999999999999999999999999999999852   1   


Q ss_pred             -ccchhheeeccCcccc
Q 023430          266 -LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 -~~~~~~~~~~ape~~~  281 (282)
                       ....++..|+|||.++
T Consensus       155 ~~~~~~~~~y~aPE~~~  171 (260)
T PF00069_consen  155 FNPFVGTPEYMAPEVLQ  171 (260)
T ss_dssp             BSSSSSSGGGSCHHHHT
T ss_pred             ccccccccccccccccc
Confidence             1225688999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.97  E-value=8.3e-31  Score=225.10  Aligned_cols=171  Identities=19%  Similarity=0.276  Sum_probs=144.7

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+|.............+++|.+....  .....+.+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   80 (283)
T cd05048           3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE   80 (283)
T ss_pred             ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence            345799999999999999999987755434455679999886543  233445688999999999999999999999988


Q ss_pred             CEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~  251 (282)
                      ...|++|||+++++|.+++...                ..+++..+..++.|++.||.|||+++|+||||||+|||++++
T Consensus        81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~  160 (283)
T cd05048          81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG  160 (283)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence            8999999999999999998764                347788999999999999999999999999999999999999


Q ss_pred             CcEEEEecCcccccc---------cchhheeeccCccc
Q 023430          252 GHVMAAHSLNSHNQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       252 ~~v~l~Dfg~s~~~~---------~~~~~~~~~ape~~  280 (282)
                      +.++|+|||++....         ...+++.|||||.+
T Consensus       161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  198 (283)
T cd05048         161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAI  198 (283)
T ss_pred             CcEEECCCcceeeccccccccccCCCcccccccCHHHh
Confidence            999999999986321         11346789999976

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=1.1e-30  Score=238.11  Aligned_cols=160  Identities=21%  Similarity=0.339  Sum_probs=131.1

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ...+|++.++||+|+||.||+|.+.     ..+..||||++....       ....+|+.+|+.++|+||+++++++...
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~-----~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~  131 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICI-----DTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTE  131 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeec
Confidence            4568999999999999999999976     356789999885432       1234699999999999999998876432


Q ss_pred             --------CEEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cE
Q 023430          188 --------SKLYLILDFINGGHLFFHLY----RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HV  254 (282)
Q Consensus       188 --------~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v  254 (282)
                              ..+++||||+++ +|..++.    ....+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+
T Consensus       132 ~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~v  210 (440)
T PTZ00036        132 CFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTL  210 (440)
T ss_pred             ccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCce
Confidence                    247799999986 5655553    245689999999999999999999999999999999999999665 69


Q ss_pred             EEEecCcccccc------cchhheeeccCccc
Q 023430          255 MAAHSLNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       255 ~l~Dfg~s~~~~------~~~~~~~~~ape~~  280 (282)
                      ||+|||+|+...      ...|++.|||||.+
T Consensus       211 kL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~  242 (440)
T PTZ00036        211 KLCDFGSAKNLLAGQRSVSYICSRFYRAPELM  242 (440)
T ss_pred             eeeccccchhccCCCCcccCCCCcCccCHHHh
Confidence            999999997432      22568899999975

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.97  E-value=2.4e-30  Score=225.39  Aligned_cols=164  Identities=23%  Similarity=0.319  Sum_probs=143.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||++.+.     .++..+|+|.+....  .....+.+.+|+++++.++||||+++++.+..++.
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~-----~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   73 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHR-----PSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGE   73 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEc-----CCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCE
Confidence            36999999999999999999876     345679999886542  23344567889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      +++||||+++++|.+++.+.+.+++..+..++.|++.||.|||+ ++++||||||+|||++.++.++|+|||++..... 
T Consensus        74 ~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (308)
T cd06615          74 ISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  153 (308)
T ss_pred             EEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence            99999999999999999888889999999999999999999997 6899999999999999999999999999864321 


Q ss_pred             ----chhheeeccCccc
Q 023430          268 ----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ----~~~~~~~~ape~~  280 (282)
                          -.++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~aPE~~  170 (308)
T cd06615         154 MANSFVGTRSYMSPERL  170 (308)
T ss_pred             ccccCCCCcCccChhHh
Confidence                1468899999975

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.97  E-value=2e-30  Score=220.77  Aligned_cols=166  Identities=20%  Similarity=0.319  Sum_probs=143.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|+++     ..+..||||.+.............+.+|+.+++.++||||+++++.+...+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCL-----LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEe-----CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCe
Confidence            57999999999999999999976     3567899998865443344455668889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          190 LYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .+++|||+++++|..++..    ...+++..+..++.|++.||.|||+++++|+||||+|||++.++.++|+|||++...
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~  156 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence            9999999999999887753    344788999999999999999999999999999999999999999999999988632


Q ss_pred             c-------cchhheeeccCccc
Q 023430          266 L-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~-------~~~~~~~~~ape~~  280 (282)
                      .       ...++..|||||.+
T Consensus       157 ~~~~~~~~~~~~~~~~~aPE~~  178 (267)
T cd08228         157 SSKTTAAHSLVGTPYYMSPERI  178 (267)
T ss_pred             cchhHHHhcCCCCccccChhhh
Confidence            1       12568899999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.97  E-value=5.5e-31  Score=232.26  Aligned_cols=174  Identities=19%  Similarity=0.259  Sum_probs=143.5

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      |.+..++|++.+.||+|+||.||+|.+.++....+++.||+|+++...  .....+.+..|+.+++.+ +|+||++++++
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~   79 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA   79 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence            445567899999999999999999987766555667889999986532  122345577899999999 79999999998


Q ss_pred             EEe-CCEEEEEEeccCCCchHHHHHhc-----------------------------------------------------
Q 023430          184 FQT-RSKLYLILDFINGGHLFFHLYRQ-----------------------------------------------------  209 (282)
Q Consensus       184 ~~~-~~~~~lv~e~~~~g~L~~~l~~~-----------------------------------------------------  209 (282)
                      +.. +..++++|||+++++|..++...                                                     
T Consensus        80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (337)
T cd05054          80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED  159 (337)
T ss_pred             EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence            764 45789999999999999888542                                                     


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc---------hhhe
Q 023430          210 --------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC---------FFFF  272 (282)
Q Consensus       210 --------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~---------~~~~  272 (282)
                              ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......         .++.
T Consensus       160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~  239 (337)
T cd05054         160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL  239 (337)
T ss_pred             hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence                    25788889999999999999999999999999999999999999999999999753211         2356


Q ss_pred             eeccCccc
Q 023430          273 LFLGGGVF  280 (282)
Q Consensus       273 ~~~ape~~  280 (282)
                      .|||||.+
T Consensus       240 ~y~aPE~~  247 (337)
T cd05054         240 KWMAPESI  247 (337)
T ss_pred             cccCcHHh
Confidence            79999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.97  E-value=1.3e-30  Score=226.42  Aligned_cols=170  Identities=24%  Similarity=0.319  Sum_probs=140.1

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQ  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~  185 (282)
                      +..++|++.+.||+|+||.||+|.++..   .....+++|.+....  .....+.+.+|+.++.++ +|+||+++++++.
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~---~~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~   78 (303)
T cd05088           4 LEWNDIKFQDVIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACE   78 (303)
T ss_pred             cchhhceeeeeecCCCCceEEEEEEccC---CceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC
Confidence            4567899999999999999999997632   122345777665322  233445688899999999 8999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD  249 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~  249 (282)
                      ..+..|+||||+++++|.+++.+.+                .+++..++.++.|++.||+|||++||+||||||+|||++
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~  158 (303)
T cd05088          79 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG  158 (303)
T ss_pred             CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec
Confidence            9999999999999999999987542                468889999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCccccccc------chhheeeccCcccc
Q 023430          250 SDGHVMAAHSLNSHNQLC------CFFFFLFLGGGVFN  281 (282)
Q Consensus       250 ~~~~v~l~Dfg~s~~~~~------~~~~~~~~ape~~~  281 (282)
                      .++.++|+|||++.....      ..++..|||||.+.
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  196 (303)
T cd05088         159 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN  196 (303)
T ss_pred             CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHh
Confidence            999999999999964221      12256799999763

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.3e-30  Score=234.45  Aligned_cols=161  Identities=22%  Similarity=0.273  Sum_probs=139.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|++++.||+|+||.||+|...+.   ..+..|++|.+....        ...+|+.+|+.++|+||+++++++....
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~---~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~  159 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGD---EQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKS  159 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCC---ccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCC
Confidence            45799999999999999999986532   345678999875431        2457999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|++||++. ++|..++.....+++.+++.++.||+.||.|||++|||||||||+|||++.++.++|+|||++....  
T Consensus       160 ~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        160 TVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             EEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence            9999999996 5788888777789999999999999999999999999999999999999999999999999985321  


Q ss_pred             -------cchhheeeccCcccc
Q 023430          267 -------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -------~~~~~~~~~ape~~~  281 (282)
                             ...|++.|||||.+.
T Consensus       239 ~~~~~~~~~~gt~~y~aPE~~~  260 (392)
T PHA03207        239 PDTPQCYGWSGTLETNSPELLA  260 (392)
T ss_pred             cccccccccccccCccCHhHhc
Confidence                   125799999999874

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-31  Score=236.17  Aligned_cols=167  Identities=26%  Similarity=0.373  Sum_probs=146.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHH-----HHHHHHHHHHhcC---CCCeeee
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD-----YMKAERDILTKVT---HPFIVQL  180 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~-----~~~~E~~~l~~l~---h~nIv~l  180 (282)
                      ..+|..++.+|+|+||.|++|.++     .....|+||.+.+.+.....+++     .+-.||+||..++   |+||+++
T Consensus       560 ~s~yttlq~lG~GAyGkV~lai~K-----~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl  634 (772)
T KOG1152|consen  560 FSDYTTLQPLGEGAYGKVNLAIHK-----ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL  634 (772)
T ss_pred             cccceeeeeccccccceEEEeeec-----ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence            457999999999999999999988     45778999999887654433322     2457999999998   9999999


Q ss_pred             eEEEEeCCEEEEEEecc-CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          181 RYSFQTRSKLYLILDFI-NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                      +++|++++.+||+||-. +|.+|++++..+..+.|.++..|++|++.|+++||++||||||||-+|++++.+|-|||+||
T Consensus       635 LdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidf  714 (772)
T KOG1152|consen  635 LDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDF  714 (772)
T ss_pred             hheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeec
Confidence            99999999999999975 45699999999999999999999999999999999999999999999999999999999999


Q ss_pred             Ccccccccc-----hhheeeccCccc
Q 023430          260 LNSHNQLCC-----FFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~~-----~~~~~~~ape~~  280 (282)
                      |.|.--..-     .||..|+|||+|
T Consensus       715 gsaa~~ksgpfd~f~gtv~~aapevl  740 (772)
T KOG1152|consen  715 GSAAYTKSGPFDVFVGTVDYAAPEVL  740 (772)
T ss_pred             cchhhhcCCCcceeeeeccccchhhh
Confidence            998633322     569999999987

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.97  E-value=2e-30  Score=220.90  Aligned_cols=164  Identities=23%  Similarity=0.369  Sum_probs=143.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+.+     ..+..+|+|++....   ......+.+|+.+++.++|+||+++++.+...+
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~   79 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNL-----HTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE   79 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEEC-----CCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Confidence            457999999999999999999976     356789999986542   223345778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+||||+++++|.+++...+.+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++....  
T Consensus        80 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd06646          80 KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT  159 (267)
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence            999999999999999998877789999999999999999999999999999999999999999999999999986422  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...++..|+|||.+
T Consensus       160 ~~~~~~~~~~~~y~~PE~~  178 (267)
T cd06646         160 IAKRKSFIGTPYWMAPEVA  178 (267)
T ss_pred             ccccCccccCccccCHhHc
Confidence                 12467899999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.97  E-value=2.4e-30  Score=223.14  Aligned_cols=173  Identities=17%  Similarity=0.215  Sum_probs=142.4

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.++||+|+||.||+|..+....+.....||+|.+.....  ......+.+|+.+++.++|+||+++++.+.
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   79 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGFTCHHVVRLLGVVS   79 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            455678999999999999999999876543334566799998764431  122334678999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEE
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQG----------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~  255 (282)
                      .....++||||+++|+|.+++...+          .+....+..++.|++.||.|||+++|+||||||+|||++.++.++
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence            9999999999999999999986532          235677888999999999999999999999999999999999999


Q ss_pred             EEecCccccccc---------chhheeeccCccc
Q 023430          256 AAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       256 l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      |+|||+++....         ..++..|||||.+
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~  193 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL  193 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHh
Confidence            999999864221         1335679999976

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.97  E-value=1.2e-30  Score=230.66  Aligned_cols=174  Identities=18%  Similarity=0.275  Sum_probs=142.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      |.+..++|++.+.||+|+||.||+|.+.+......++.||||+++...  .....+.+.+|+.++..+ +|+||++++++
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   79 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA   79 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcce
Confidence            345567899999999999999999997765555567889999987543  223345677899999999 58999999988


Q ss_pred             EEe-CCEEEEEEeccCCCchHHHHHhc-----------------------------------------------------
Q 023430          184 FQT-RSKLYLILDFINGGHLFFHLYRQ-----------------------------------------------------  209 (282)
Q Consensus       184 ~~~-~~~~~lv~e~~~~g~L~~~l~~~-----------------------------------------------------  209 (282)
                      +.. ...++++|||+++|+|.+++...                                                     
T Consensus        80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (343)
T cd05103          80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS  159 (343)
T ss_pred             eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence            765 45689999999999999888642                                                     


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-------
Q 023430          210 --------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-------  268 (282)
Q Consensus       210 --------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-------  268 (282)
                                    ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++.....+       
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  239 (343)
T cd05103         160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKG  239 (343)
T ss_pred             cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcC
Confidence                          13567788889999999999999999999999999999999999999999998643211       


Q ss_pred             --hhheeeccCccc
Q 023430          269 --FFFFLFLGGGVF  280 (282)
Q Consensus       269 --~~~~~~~ape~~  280 (282)
                        .++..|||||.+
T Consensus       240 ~~~~~~~y~aPE~~  253 (343)
T cd05103         240 DARLPLKWMAPETI  253 (343)
T ss_pred             CCCCCcceECcHHh
Confidence              235679999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-31  Score=242.40  Aligned_cols=163  Identities=28%  Similarity=0.368  Sum_probs=137.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS--  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--  188 (282)
                      .|...+.||+|+||.||+++++     .+|+.||||.++...  ....++.+.+|+++|++++|+|||++++.-++..  
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnk-----etG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~   86 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNK-----ETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLG   86 (732)
T ss_pred             ceeehhhhcCCccceeeeeccc-----ccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccC
Confidence            4666788999999999999987     577889999998754  2344566888999999999999999988765433  


Q ss_pred             ----EEEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc--CCCc--EEEE
Q 023430          189 ----KLYLILDFINGGHLFFHLYRQ---GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD--SDGH--VMAA  257 (282)
Q Consensus       189 ----~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~--~~~~--v~l~  257 (282)
                          ...+|||||.||+|+..+.+.   ..+++.+++.++.+++.||.|||++|||||||||.||++-  .+|.  -||+
T Consensus        87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLt  166 (732)
T KOG4250|consen   87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLT  166 (732)
T ss_pred             cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeee
Confidence                568999999999999999763   3489999999999999999999999999999999999984  3344  6999


Q ss_pred             ecCcccccccc------hhheeeccCccc
Q 023430          258 HSLNSHNQLCC------FFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~~~------~~~~~~~ape~~  280 (282)
                      |||.|+..-.+      .||..|++||.+
T Consensus       167 DfG~Arel~d~s~~~S~vGT~~YLhPel~  195 (732)
T KOG4250|consen  167 DFGAARELDDNSLFTSLVGTEEYLHPELY  195 (732)
T ss_pred             cccccccCCCCCeeeeecCchhhcChHHH
Confidence            99999854433      779999999976

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.97  E-value=2.9e-30  Score=221.86  Aligned_cols=171  Identities=18%  Similarity=0.249  Sum_probs=142.0

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+|.+...+. ..+..+++|.+....  .......+.+|+.+++.++|+||+++++++...
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   79 (283)
T cd05090           3 PLSAVRFMEELGECAFGKIYKGHLYLPGM-DHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE   79 (283)
T ss_pred             ChhhceeeeeccccCCcceEEEEEecCCC-CCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC
Confidence            34679999999999999999998643221 345679999986532  233345688899999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS  250 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~  250 (282)
                      ...|+||||+++++|.+++...                 ..+++..+..++.|++.||.|||+++|+||||||+|||++.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~  159 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE  159 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence            9999999999999999988532                 23678889999999999999999999999999999999999


Q ss_pred             CCcEEEEecCccccccc---------chhheeeccCcccc
Q 023430          251 DGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       251 ~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      ++.++|+|||+++....         ..++..|+|||.+.
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05090         160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM  199 (283)
T ss_pred             CCcEEeccccccccccCCcceecccCCCccceecChHHhc
Confidence            99999999999964321         13356799999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.97  E-value=8.9e-31  Score=232.15  Aligned_cols=167  Identities=23%  Similarity=0.292  Sum_probs=144.6

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      ++..+...+.++||+|-||.|.+|...      ....||||+++...  ..+.++.|..|+++|.+|+||||++++++|.
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeve------g~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~  605 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVE------GPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCV  605 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEec------CceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeee
Confidence            455567888999999999999999854      24679999998765  3455678999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .++.+++++||+++|+|.+++.++..  ........++.||+.||+||.+.++|||||.+.|+|++.++++||+|||.|+
T Consensus       606 ~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR  685 (807)
T KOG1094|consen  606 QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSR  685 (807)
T ss_pred             cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccc
Confidence            99999999999999999999988733  3445667799999999999999999999999999999999999999999998


Q ss_pred             ccccchh---------heeeccCccc
Q 023430          264 NQLCCFF---------FFLFLGGGVF  280 (282)
Q Consensus       264 ~~~~~~~---------~~~~~ape~~  280 (282)
                      +.....+         -.+|||+|.+
T Consensus       686 ~lysg~yy~vqgr~vlpiRwmawEsi  711 (807)
T KOG1094|consen  686 NLYSGDYYRVQGRAVLPIRWMAWESI  711 (807)
T ss_pred             ccccCCceeeecceeeeeeehhHHHH
Confidence            6544422         4799999975

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=2e-30  Score=219.57  Aligned_cols=163  Identities=24%  Similarity=0.374  Sum_probs=138.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||++.++.      ...+|+|.+.....    ..+.+.+|+.+++.++||||+++++++...+
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~------~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   72 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWRA------QIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK   72 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEecc------CceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCC
Confidence            4579999999999999999998752      34689998764432    1245778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..++||||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+.....
T Consensus        73 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05114          73 PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLD  152 (256)
T ss_pred             CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCC
Confidence            999999999999999988653 4588999999999999999999999999999999999999999999999998864321


Q ss_pred             -----c---hhheeeccCcccc
Q 023430          268 -----C---FFFFLFLGGGVFN  281 (282)
Q Consensus       268 -----~---~~~~~~~ape~~~  281 (282)
                           .   .+...|+|||.+.
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~  174 (256)
T cd05114         153 DEYTSSSGAKFPVKWSPPEVFN  174 (256)
T ss_pred             CceeccCCCCCchhhCChhhcc
Confidence                 1   2345799999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5e-30  Score=217.75  Aligned_cols=166  Identities=28%  Similarity=0.371  Sum_probs=143.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh--hhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII--KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ++|++.+.||+|+||.||++...     ..+..+|+|.+......  .....+.+.+|+.+++.++||||+++++++...
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~-----~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   76 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDV-----DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD   76 (263)
T ss_pred             CcccccceecCCCceEEEEEEEc-----CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC
Confidence            47899999999999999999865     35678999988654321  122345688899999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ...++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.... 
T Consensus        77 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~  156 (263)
T cd06625          77 ETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  156 (263)
T ss_pred             CeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence            9999999999999999999888889999999999999999999999999999999999999999999999999985321 


Q ss_pred             ---------cchhheeeccCccc
Q 023430          267 ---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ---------~~~~~~~~~ape~~  280 (282)
                               ...++..|+|||.+
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~  179 (263)
T cd06625         157 ICSSGTGMKSVTGTPYWMSPEVI  179 (263)
T ss_pred             cccccccccCCCcCccccCccee
Confidence                     12457789999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PHA02988 hypothetical protein; Provisional

Probab=99.97  E-value=1.5e-30  Score=224.09  Aligned_cols=158  Identities=11%  Similarity=0.086  Sum_probs=137.9

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe----CCEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT----RSKLY  191 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~  191 (282)
                      ..||+|++|.||+|++.       ++.||||.+...........+.+.+|+.+|++++||||+++++++.+    ...++
T Consensus        26 ~~i~~g~~~~v~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~   98 (283)
T PHA02988         26 VLIKENDQNSIYKGIFN-------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLS   98 (283)
T ss_pred             eEEeeCCceEEEEEEEC-------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceE
Confidence            57899999999999864       56799999976544344445678899999999999999999999876    35789


Q ss_pred             EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCcccc----cc
Q 023430          192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHN----QL  266 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~----~~  266 (282)
                      +||||+++|+|.+++...+.+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++.    ..
T Consensus        99 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~  178 (283)
T PHA02988         99 LILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF  178 (283)
T ss_pred             EEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccc
Confidence            999999999999999887889999999999999999999998 4899999999999999999999999999864    22


Q ss_pred             cchhheeeccCccc
Q 023430          267 CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~~~~~~~~~ape~~  280 (282)
                      ...++..|||||.+
T Consensus       179 ~~~~~~~y~aPE~~  192 (283)
T PHA02988        179 KNVNFMVYFSYKML  192 (283)
T ss_pred             cccCcccccCHHHh
Confidence            34678999999987

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=2.8e-30  Score=220.89  Aligned_cols=170  Identities=23%  Similarity=0.360  Sum_probs=146.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|++.+.||+|+||.||+|+.+...+....+.+++|.+....  .....+.+.+|++++++++|+||+++++++...+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   81 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE   81 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence            35799999999999999999998765554566789999876532  2234566889999999999999999999999888


Q ss_pred             EEEEEEeccCCCchHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          189 KLYLILDFINGGHLFFHLYRQG---------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                      ..|+||||+++++|.+++....         .+++..+..++.|++.||.|||+++|+||||||+|||++.++.++++||
T Consensus        82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence            9999999999999999997655         6899999999999999999999999999999999999999999999999


Q ss_pred             Cccccccc--------chhheeeccCccc
Q 023430          260 LNSHNQLC--------CFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~--------~~~~~~~~ape~~  280 (282)
                      |++.....        ..++..|++||.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  190 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAV  190 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhh
Confidence            99864321        1446779999975

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.97  E-value=3.6e-30  Score=222.01  Aligned_cols=171  Identities=20%  Similarity=0.275  Sum_probs=143.9

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ...+|.+.+.||+|+||.||++.............+|+|.+....   ....+.+.+|+++++.++|+||+++++++...
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   79 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEG   79 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            456899999999999999999986543333455678999886532   23345688899999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcE
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG-------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV  254 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v  254 (282)
                      +..++||||+++++|.+++...+             .+++..+..++.|++.||.|||++|++||||||+|||++.++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~  159 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV  159 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence            99999999999999999987543             38899999999999999999999999999999999999999999


Q ss_pred             EEEecCccccccc---------chhheeeccCcccc
Q 023430          255 MAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       255 ~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      +|+|||++.....         ..++..|+|||.+.
T Consensus       160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  195 (288)
T cd05093         160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  195 (288)
T ss_pred             EeccCCccccccCCceeecCCCCCccccccCHHHhc
Confidence            9999999863221         12366899999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.97  E-value=5.4e-30  Score=218.07  Aligned_cols=166  Identities=28%  Similarity=0.374  Sum_probs=142.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh--hhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI--IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      .+|++.+.||+|+||.||++.+.     .++..||+|.+.....  ......+.+.+|+.+++.++|+||+++++++...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   76 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDA-----DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP   76 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEc-----CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC
Confidence            57999999999999999999876     3567899998864321  1223456788999999999999999999988763


Q ss_pred             --CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 --SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                        ..++++|||+++++|.+++.+.+.+++..++.++.|++.||.|||+++|+|+||||+|||++.++.++|+|||++...
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          77 MERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             CCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence              568899999999999999988777899999999999999999999999999999999999999999999999988632


Q ss_pred             c----------cchhheeeccCccc
Q 023430          266 L----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~----------~~~~~~~~~ape~~  280 (282)
                      .          ...++..|+|||.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~  181 (265)
T cd06652         157 QTICLSGTGMKSVTGTPYWMSPEVI  181 (265)
T ss_pred             ccccccccccccCCCCccccChhhh
Confidence            1          12468899999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=2.7e-30  Score=222.72  Aligned_cols=164  Identities=24%  Similarity=0.332  Sum_probs=132.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc---CCCCeeeeeEEEE--
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV---THPFIVQLRYSFQ--  185 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~--  185 (282)
                      +|++.+.||+|+||.||+|++..    ..+..||+|++....... .....+.+|+.+++.+   +||||+++++++.  
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~   76 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   76 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcC----CCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecc
Confidence            69999999999999999998752    235679999887543222 2223355677777665   6999999999875  


Q ss_pred             ---eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          186 ---TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       186 ---~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                         ....+++||||+. ++|..++...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||
T Consensus        77 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          77 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             cCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence               2456899999997 5888888653  348899999999999999999999999999999999999999999999999


Q ss_pred             cccccc------cchhheeeccCccc
Q 023430          261 NSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~------~~~~~~~~~ape~~  280 (282)
                      ++....      ...|++.|||||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (290)
T cd07862         156 LARIYSFQMALTSVVVTLWYRAPEVL  181 (290)
T ss_pred             ceEeccCCcccccccccccccChHHH
Confidence            986322      22568999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-31  Score=232.02  Aligned_cols=165  Identities=30%  Similarity=0.383  Sum_probs=145.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      +=|.+.+.||+|.|++|-+|++.     .++..||||++.+.....- ....+.+|+++|+.++|||||+||.+..++..
T Consensus        18 GLYDLekTlG~GHFAVVKLArHV-----FTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTK   91 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHV-----FTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTK   91 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhh-----cccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccce
Confidence            45888899999999999999887     5778899999988765433 33446679999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCccc----
Q 023430          190 LYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNSH----  263 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~----  263 (282)
                      +|||+|+-.+|+|+++|.++. .+.+..++.++.||+.|+.|||...+|||||||+|+.+.+ -|-|||.|||++-    
T Consensus        92 lyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P  171 (864)
T KOG4717|consen   92 LYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP  171 (864)
T ss_pred             EEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence            999999999999999998764 4899999999999999999999999999999999998765 5899999999994    


Q ss_pred             --ccccchhheeeccCccc
Q 023430          264 --NQLCCFFFFLFLGGGVF  280 (282)
Q Consensus       264 --~~~~~~~~~~~~ape~~  280 (282)
                        ......|..+|-|||+|
T Consensus       172 G~kL~TsCGSLAYSAPEIL  190 (864)
T KOG4717|consen  172 GKKLTTSCGSLAYSAPEIL  190 (864)
T ss_pred             cchhhcccchhhccCchhh
Confidence              22333889999999987

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.6e-30  Score=220.36  Aligned_cols=173  Identities=18%  Similarity=0.230  Sum_probs=145.2

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||++.++....+.....||+|.+.....  ......+.+|+.+++.++|+||+++++++.
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   79 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS--MRERIEFLNEASVMKEFNCHHVVRLLGVVS   79 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC--HHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence            355678999999999999999999987654445567899999865431  223345778999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEE
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQG----------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~  255 (282)
                      .....++||||+++++|.+++....          .+.+..+..++.|++.||.|||+.+|+||||||+|||++.++.++
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k  159 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK  159 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence            9999999999999999999886432          357788999999999999999999999999999999999999999


Q ss_pred             EEecCccccccc---------chhheeeccCccc
Q 023430          256 AAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       256 l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      |+|||+++....         ..++..|+|||.+
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  193 (277)
T cd05032         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL  193 (277)
T ss_pred             ECCcccchhhccCcccccCCCCCccccccCHHHH
Confidence            999999863221         2346789999976

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=3.8e-30  Score=222.34  Aligned_cols=170  Identities=22%  Similarity=0.325  Sum_probs=144.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCC-----------CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDD-----------GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI  177 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI  177 (282)
                      .++|++.+.||+|+||.||++.......           ......||+|.+.....  ....+.+.+|+++++.++|+||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i   81 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI   81 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence            4689999999999999999998764321           12345689999875532  2445678899999999999999


Q ss_pred             eeeeEEEEeCCEEEEEEeccCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCce
Q 023430          178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-----------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENI  246 (282)
Q Consensus       178 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NI  246 (282)
                      +++++++..++..+++|||+++++|..++....           .+++..+..++.|++.||.|||+++|+||||||+||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni  161 (296)
T cd05051          82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC  161 (296)
T ss_pred             eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence            999999999999999999999999999987755           688999999999999999999999999999999999


Q ss_pred             EEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          247 LMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       247 Ll~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      +++.++.++|+|||++......         .++..|||||.+
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  204 (296)
T cd05051         162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESV  204 (296)
T ss_pred             eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHh
Confidence            9999999999999998742211         235689999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=2.1e-30  Score=230.12  Aligned_cols=163  Identities=21%  Similarity=0.327  Sum_probs=135.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++.+.||+|+||.||++.+.     ..++.||+|++..... .....+.+.+|+.+++.++|+||+++++++... 
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   89 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK   89 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEec-----CCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc
Confidence            468999999999999999999865     4567799999865432 223345577899999999999999999988643 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                           ...|+||||+++ +|...+..  .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        90 ~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~  166 (355)
T cd07874          90 SLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_pred             cccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCccc
Confidence                 357999999976 56565543  4788999999999999999999999999999999999999999999999999


Q ss_pred             ccccc------chhheeeccCccc
Q 023430          263 HNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~------~~~~~~~~ape~~  280 (282)
                      +....      ..|+..|||||.+
T Consensus       167 ~~~~~~~~~~~~~~t~~y~aPE~~  190 (355)
T cd07874         167 RTAGTSFMMTPYVVTRYYRAPEVI  190 (355)
T ss_pred             ccCCCccccCCccccCCccCHHHH
Confidence            74322      2578999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.97  E-value=1.4e-30  Score=221.76  Aligned_cols=164  Identities=26%  Similarity=0.403  Sum_probs=143.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|++.     ..+..||+|+++...   ......+.+|+.+++.++||||+++++.+...+
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~   79 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNV-----NTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD   79 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEc-----CCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Confidence            347888899999999999999876     356789999986543   122345778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+||||+++++|.+++...+.+++.+++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....  
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd06645          80 KLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT  159 (267)
T ss_pred             EEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence            999999999999999999888889999999999999999999999999999999999999999999999999985321  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...|+..|||||.+
T Consensus       160 ~~~~~~~~~~~~y~aPE~~  178 (267)
T cd06645         160 IAKRKSFIGTPYWMAPEVA  178 (267)
T ss_pred             ccccccccCcccccChhhh
Confidence                 12578999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.97  E-value=2.2e-30  Score=222.00  Aligned_cols=171  Identities=20%  Similarity=0.256  Sum_probs=144.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.+.||+|+||.||+|.+...........||+|++....  .....+.+.+|+++++.++|+||+++++++....
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   81 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD   81 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence            45788999999999999999987654333456789999986543  2223467889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcE
Q 023430          189 KLYLILDFINGGHLFFHLYRQG--------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV  254 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v  254 (282)
                      ..|+||||+++++|.+++...+              .+++..+..++.|++.||.|||++|++||||||+|||++.++.+
T Consensus        82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence            9999999999999999987542              36788999999999999999999999999999999999999999


Q ss_pred             EEEecCccccccc---------chhheeeccCcccc
Q 023430          255 MAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       255 ~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      +|+|||++.....         ..++..|+|||.+.
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIM  197 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhc
Confidence            9999999864211         12357899999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.97  E-value=6.4e-30  Score=217.76  Aligned_cols=169  Identities=22%  Similarity=0.240  Sum_probs=143.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.++...  .....||+|++....  .......+.+|+.+++.++|+||+++++.+...+
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~--~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   78 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPG--KKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR   78 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCC--CCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC
Confidence            467999999999999999999986431  234579999886543  2333456788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..+++|||+++++|.+++... +.+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++.....
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          79 PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence            999999999999999998764 4689999999999999999999999999999999999999999999999999875431


Q ss_pred             ---------chhheeeccCcccc
Q 023430          268 ---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ---------~~~~~~~~ape~~~  281 (282)
                               ..++..|+|||.+.
T Consensus       159 ~~~~~~~~~~~~~~~y~~Pe~~~  181 (266)
T cd05033         159 SEATYTTKGGKIPIRWTAPEAIA  181 (266)
T ss_pred             cccceeccCCCCCccccChhhhc
Confidence                     12346799999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.97  E-value=7.1e-30  Score=219.17  Aligned_cols=159  Identities=22%  Similarity=0.322  Sum_probs=138.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.++||+|+||.||+|.+.     .++..||+|++....  .....+.+.+|+.+++.++||||+++++.+...+..
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   74 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHL-----LTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRI   74 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEc-----CCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEE
Confidence            6888999999999999999876     456789999986542  223345688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      ++||||+++++|..+    ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.....   
T Consensus        75 ~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~  150 (279)
T cd06619          75 SICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA  150 (279)
T ss_pred             EEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc
Confidence            999999999988544    3478889999999999999999999999999999999999999999999999964222   


Q ss_pred             --chhheeeccCccc
Q 023430          268 --CFFFFLFLGGGVF  280 (282)
Q Consensus       268 --~~~~~~~~ape~~  280 (282)
                        ..++..|+|||.+
T Consensus       151 ~~~~~~~~y~aPE~~  165 (279)
T cd06619         151 KTYVGTNAYMAPERI  165 (279)
T ss_pred             cCCCCChhhcCceee
Confidence              2568999999986

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.5e-31  Score=225.58  Aligned_cols=158  Identities=23%  Similarity=0.319  Sum_probs=133.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh--cCCCCeeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK--VTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~  187 (282)
                      .+..+.+.||+|.||.||+|+|++       ..||||++....     + +.+.+|.+|.+.  |+|+||+.++++=...
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wrG-------e~VAVKiF~srd-----E-~SWfrEtEIYqTvmLRHENILgFIaaD~~~  277 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWRG-------EDVAVKIFSSRD-----E-RSWFRETEIYQTVMLRHENILGFIAADNKD  277 (513)
T ss_pred             heeEEEEEecCccccceeeccccC-------CceEEEEecccc-----h-hhhhhHHHHHHHHHhccchhhhhhhccccC
Confidence            468899999999999999999984       459999986432     2 345568888775  6899999998765433


Q ss_pred             C----EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeeccCCCceEEcCCCcEE
Q 023430          188 S----KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC--------GIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       188 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~--------~iiHrDlKp~NILl~~~~~v~  255 (282)
                      .    ++|||++|.+.|+|+++|.+ ..++....+.++..++.||.+||..        .|.|||||..|||+..+|...
T Consensus       278 ~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~  356 (513)
T KOG2052|consen  278 NGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  356 (513)
T ss_pred             CCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence            2    79999999999999999987 5688999999999999999999953        399999999999999999999


Q ss_pred             EEecCcccc--cc---------cchhheeeccCcccc
Q 023430          256 AAHSLNSHN--QL---------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       256 l~Dfg~s~~--~~---------~~~~~~~~~ape~~~  281 (282)
                      |+|+|+|-.  +.         ...||.+|||||+||
T Consensus       357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLd  393 (513)
T KOG2052|consen  357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLD  393 (513)
T ss_pred             EeeceeeEEecccCCcccCCCCCccceeeccChHHhh
Confidence            999999932  11         128899999999986

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.5e-30  Score=222.84  Aligned_cols=171  Identities=20%  Similarity=0.295  Sum_probs=140.9

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCC---------CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDD---------GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIV  178 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv  178 (282)
                      ..++|++.+.||+|+||.||+|++.+..+         ......||+|.+....  .....+.+.+|+++++.++|+||+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~   80 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNII   80 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcC
Confidence            34689999999999999999988654321         1223458999987542  233445688999999999999999


Q ss_pred             eeeEEEEeCCEEEEEEeccCCCchHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCce
Q 023430          179 QLRYSFQTRSKLYLILDFINGGHLFFHLYRQG------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENI  246 (282)
Q Consensus       179 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NI  246 (282)
                      ++++++...+..++||||+++++|.+++....            .+++..+..++.|++.||.|||+++++||||||+||
T Consensus        81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni  160 (295)
T cd05097          81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC  160 (295)
T ss_pred             eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence            99999999999999999999999999886432            367888899999999999999999999999999999


Q ss_pred             EEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          247 LMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       247 Ll~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      |++.++.++|+|||++......         .++..|+|||.+
T Consensus       161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  203 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESI  203 (295)
T ss_pred             EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhh
Confidence            9999999999999998642111         225689999976

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.1e-30  Score=228.99  Aligned_cols=164  Identities=19%  Similarity=0.299  Sum_probs=137.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++++.||+|+||.||+|.+.     ..+..||||++..... .....+.+.+|+.+++.++|+||+++++++... 
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDT-----RLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPAT   87 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEEC-----CCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc
Confidence            468999999999999999999876     3567899999875432 223344567899999999999999999887543 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                           ...|++||++ +++|..++. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        88 ~~~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~  165 (343)
T cd07878          88 SIENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA  165 (343)
T ss_pred             cccccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccc
Confidence                 3578999988 678877664 456899999999999999999999999999999999999999999999999999


Q ss_pred             cccccc----hhheeeccCccc
Q 023430          263 HNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~----~~~~~~~ape~~  280 (282)
                      ......    .|++.|+|||.+
T Consensus       166 ~~~~~~~~~~~~t~~y~aPE~~  187 (343)
T cd07878         166 RQADDEMTGYVATRWYRAPEIM  187 (343)
T ss_pred             eecCCCcCCccccccccCchHh
Confidence            753322    568999999986

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.97  E-value=3.2e-30  Score=219.94  Aligned_cols=159  Identities=20%  Similarity=0.198  Sum_probs=131.2

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEec
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDF  196 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  196 (282)
                      .||+|+||.||+|.....   .....+++|.+....  .......+.+|+.+++.++|+||+++++.+......|+||||
T Consensus         2 ~lg~G~fg~v~~~~~~~~---~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~   76 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRG---MSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEF   76 (269)
T ss_pred             cCCccCCceEEEEEEecC---CCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEe
Confidence            589999999999975422   345568888775432  223345577899999999999999999999999999999999


Q ss_pred             cCCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc---
Q 023430          197 INGGHLFFHLYRQG-----IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC---  268 (282)
Q Consensus       197 ~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~---  268 (282)
                      +++|+|.+++....     ..++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||++......   
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~  156 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY  156 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence            99999999987643     2457788899999999999999999999999999999999999999999998643211   


Q ss_pred             ------hhheeeccCccc
Q 023430          269 ------FFFFLFLGGGVF  280 (282)
Q Consensus       269 ------~~~~~~~ape~~  280 (282)
                            .++..|+|||++
T Consensus       157 ~~~~~~~~~~~y~aPE~~  174 (269)
T cd05042         157 ITKDCHAVPLRWLAPELV  174 (269)
T ss_pred             eccCCCCCcccccCHHHH
Confidence                  235679999976

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=6e-30  Score=222.64  Aligned_cols=174  Identities=17%  Similarity=0.256  Sum_probs=143.0

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCC--CCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDG--DSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      +.+..++|.+.+.||+|+||.||++++.+....  .....+|+|.+....  .......+.+|+.+++.+ +|+||++++
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~   90 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLL   90 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence            344457899999999999999999987643221  234569999987542  123345577899999999 799999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      +++...+..|+||||+++|+|.+++..+.                .+++.+++.++.|++.||+|||++|++||||||+|
T Consensus        91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N  170 (307)
T cd05098          91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN  170 (307)
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh
Confidence            99999999999999999999999997642                37888999999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCccccccc---------chhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      ||++.++.++|+|||++.....         ..++..|||||.+
T Consensus       171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  214 (307)
T cd05098         171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL  214 (307)
T ss_pred             eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHh
Confidence            9999999999999999864221         1224689999976

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.97  E-value=5.2e-30  Score=222.67  Aligned_cols=174  Identities=17%  Similarity=0.262  Sum_probs=143.1

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCC--CCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVD--DGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      +.+..++|.+.+.||+|+||.||+|++....  .......+|+|.+....  .....+.+.+|+.+++.+ +|+||++++
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~   87 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL   87 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchhee
Confidence            4455678999999999999999999865322  12234579999886542  223345688899999999 799999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      +.+......|++|||+++++|..++.+.                ..+++..+..++.|++.||.|||++||+||||||+|
T Consensus        88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N  167 (304)
T cd05101          88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN  167 (304)
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence            9999999999999999999999998753                236778889999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCccccccc---------chhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      ||++.++.++|+|||+++....         ..++..|||||++
T Consensus       168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  211 (304)
T cd05101         168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEAL  211 (304)
T ss_pred             EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhh
Confidence            9999999999999999864321         1235679999976

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.97  E-value=6.2e-30  Score=220.81  Aligned_cols=174  Identities=17%  Similarity=0.306  Sum_probs=145.2

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      +.+..++|++.+.||+|+||.||++.++..........+|+|.+.....  ......+.+|+.+++.+ +|+||++++++
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   84 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGV   84 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            4455678999999999999999999987554334556799998875432  22345578899999999 79999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceE
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL  247 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NIL  247 (282)
                      +...+.++++|||+++|+|..++...                ..+++..++.++.|++.||.|||+++|+||||||+|||
T Consensus        85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil  164 (293)
T cd05053          85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL  164 (293)
T ss_pred             EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence            99999999999999999999998642                35788899999999999999999999999999999999


Q ss_pred             EcCCCcEEEEecCccccccc-------c--hhheeeccCccc
Q 023430          248 MDSDGHVMAAHSLNSHNQLC-------C--FFFFLFLGGGVF  280 (282)
Q Consensus       248 l~~~~~v~l~Dfg~s~~~~~-------~--~~~~~~~ape~~  280 (282)
                      ++.++.++|+|||+++....       .  .++..|+|||++
T Consensus       165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  206 (293)
T cd05053         165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEAL  206 (293)
T ss_pred             EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHh
Confidence            99999999999999864221       1  234679999975

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=8.7e-30  Score=222.37  Aligned_cols=150  Identities=42%  Similarity=0.702  Sum_probs=134.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      .+|++.+.||+|+||.||+|...     ..+..||+|.+...........+.+.+|+++++.++|+||+++++.+.....
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   75 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLK-----GTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETY   75 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEc-----CCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCE
Confidence            36999999999999999999876     3567899999987654443456678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          190 LYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .|++|||+.+++|.+++...  ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~  152 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQ  152 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhc
Confidence            99999999999999988754  4689999999999999999999999999999999999999999999999998853

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.97  E-value=8.8e-30  Score=219.90  Aligned_cols=170  Identities=22%  Similarity=0.280  Sum_probs=143.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|.+.+.||+|+||.||++++...........+++|.+....   ....+.+.+|+.+++.++|+||+++++++...+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD   80 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence            45799999999999999999987654444556678999876443   223356888999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC
Q 023430          189 KLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~  252 (282)
                      ..++||||+++++|.+++..+.                .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~  160 (291)
T cd05094          81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL  160 (291)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence            9999999999999999987542                378899999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccccc---------chhheeeccCcccc
Q 023430          253 HVMAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      .++|+|||++.....         ..++..|||||.+.
T Consensus       161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  198 (291)
T cd05094         161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  198 (291)
T ss_pred             cEEECCCCcccccCCCceeecCCCCCcceeecChHHhc
Confidence            999999999864321         23467899999763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=5.9e-30  Score=222.32  Aligned_cols=174  Identities=17%  Similarity=0.268  Sum_probs=145.6

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      +.+..++|.+.+.||+|+||.||++.+...........+|+|+++...  .....+.+.+|+.+++++ +|+||++++++
T Consensus        30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  107 (302)
T cd05055          30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGA  107 (302)
T ss_pred             ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence            445567899999999999999999986543333456679999886543  223345688999999999 79999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +...+..|++|||+.+|+|..++....  .+++.++..++.|++.||.|||+++|+|+||||+|||++.++.++++|||+
T Consensus       108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~  187 (302)
T cd05055         108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL  187 (302)
T ss_pred             EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence            999999999999999999999987543  389999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc---------hhheeeccCccc
Q 023430          262 SHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~~---------~~~~~~~ape~~  280 (282)
                      +......         .++..|||||.+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~  215 (302)
T cd05055         188 ARDIMNDSNYVVKGNARLPVKWMAPESI  215 (302)
T ss_pred             cccccCCCceeecCCCCcccccCCHhhh
Confidence            8643211         235679999976

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=6.9e-30  Score=245.34  Aligned_cols=168  Identities=23%  Similarity=0.402  Sum_probs=140.7

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ...++|++++.||+|+||.||+|+++     ..+..+|+|++..... .......+..|+.+|+.++|||||+++++|..
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk-----~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d   83 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHK-----RTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLN   83 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEEC-----CCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe
Confidence            34578999999999999999999987     4567899999875543 23344668889999999999999999998864


Q ss_pred             --CCEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-------CCEeeccCCCceEEcC---
Q 023430          187 --RSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKC-------GIVHRDLKPENILMDS---  250 (282)
Q Consensus       187 --~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~-------~iiHrDlKp~NILl~~---  250 (282)
                        ...+||||||+++++|..++..    .+.+++..++.|+.||+.||.|||+.       +||||||||+||||+.   
T Consensus        84 e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~  163 (1021)
T PTZ00266         84 KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR  163 (1021)
T ss_pred             cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence              3579999999999999988865    25689999999999999999999984       4999999999999964   


Q ss_pred             --------------CCcEEEEecCcccccc------cchhheeeccCccc
Q 023430          251 --------------DGHVMAAHSLNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       251 --------------~~~v~l~Dfg~s~~~~------~~~~~~~~~ape~~  280 (282)
                                    .+.++|+|||++....      ...|++.|||||++
T Consensus       164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL  213 (1021)
T PTZ00266        164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELL  213 (1021)
T ss_pred             ccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHH
Confidence                          2348999999986432      22679999999986

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=7.2e-30  Score=216.72  Aligned_cols=166  Identities=19%  Similarity=0.276  Sum_probs=141.4

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.++||+|+||.||+|...      .+..||+|.+....    ...+.+.+|+.+++.++|+||+++++.+.
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (261)
T cd05072           2 EIPRESIKLVKKLGAGQFGEVWMGYYN------NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVT   71 (261)
T ss_pred             cCchHHeEEeeecCCcCCceEEEEEec------CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            456779999999999999999999854      23468999876532    22456888999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ..+..+++|||+++++|.+++.+.  ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~  151 (261)
T cd05072          72 KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR  151 (261)
T ss_pred             CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccce
Confidence            999999999999999999988653  457888999999999999999999999999999999999999999999999996


Q ss_pred             cccc--------chhheeeccCcccc
Q 023430          264 NQLC--------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~--------~~~~~~~~ape~~~  281 (282)
                      ....        ..++..|||||.++
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~  177 (261)
T cd05072         152 VIEDNEYTAREGAKFPIKWTAPEAIN  177 (261)
T ss_pred             ecCCCceeccCCCccceecCCHHHhc
Confidence            4321        13356799999763

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.97  E-value=3.9e-30  Score=218.00  Aligned_cols=166  Identities=40%  Similarity=0.687  Sum_probs=147.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||+|.+.     .++..||+|++.+.........+.+.+|+++++.++||||+++++.+......
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKR-----DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEc-----cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeE
Confidence            5899999999999999999876     35677999999876544445567788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc----
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL----  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~----  266 (282)
                      ++||||+.+++|..++.....+++..+..++.|++.||.|||+++++|+||||+||++++++.++|+|||++....    
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~  155 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL  155 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc
Confidence            9999999999999999877789999999999999999999999999999999999999999999999999886422    


Q ss_pred             --cchhheeeccCcccc
Q 023430          267 --CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 --~~~~~~~~~ape~~~  281 (282)
                        ...++..|++||.+.
T Consensus       156 ~~~~~~~~~y~~PE~~~  172 (258)
T cd05578         156 TTSTSGTPGYMAPEVLC  172 (258)
T ss_pred             ccccCCChhhcCHHHHc
Confidence              235688999999863

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=5.4e-30  Score=228.20  Aligned_cols=163  Identities=20%  Similarity=0.316  Sum_probs=136.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++.+.||+|+||.||++.+.     ..++.||||++..... .....+.+.+|+.+++.++|+||+++++++... 
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~   96 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDA-----ILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK   96 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEEC-----CCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence            468999999999999999999876     3567799999875432 223345577899999999999999999887543 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                           ..+|+||||+++ +|...+..  .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus        97 ~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a  173 (364)
T cd07875          97 SLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA  173 (364)
T ss_pred             cccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence                 357999999976 56666643  4788899999999999999999999999999999999999999999999999


Q ss_pred             ccccc------chhheeeccCccc
Q 023430          263 HNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~------~~~~~~~~ape~~  280 (282)
                      +....      ..++..|+|||.+
T Consensus       174 ~~~~~~~~~~~~~~t~~y~aPE~~  197 (364)
T cd07875         174 RTAGTSFMMTPYVVTRYYRAPEVI  197 (364)
T ss_pred             cccCCCCcccCCcccCCcCCHHHH
Confidence            74322      2568999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.97  E-value=9.2e-30  Score=216.97  Aligned_cols=169  Identities=21%  Similarity=0.235  Sum_probs=142.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.++..+  .....+|+|.+....  .....+.+.+|+.+++.++||||+++++++...+
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   78 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPG--KREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK   78 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCC--CCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            457999999999999999999876332  234579999886543  1233456888999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..|+||||+++++|.+++.+. +.+++.++..++.|++.||.|||+++++||||||+|||++.++.++++|||++.....
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            999999999999999998764 4579999999999999999999999999999999999999999999999999864221


Q ss_pred             c----------hhheeeccCcccc
Q 023430          268 C----------FFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~----------~~~~~~~ape~~~  281 (282)
                      .          .++..|++||.+.
T Consensus       159 ~~~~~~~~~~~~~~~~y~~pe~~~  182 (267)
T cd05066         159 DPEAAYTTRGGKIPIRWTAPEAIA  182 (267)
T ss_pred             ccceeeecCCCccceeecCHhHhc
Confidence            1          1245799999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.97  E-value=2.2e-30  Score=222.53  Aligned_cols=170  Identities=17%  Similarity=0.247  Sum_probs=142.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|++.+.||+|+||.||+|.+...........||+|++....  .....+.+.+|+.+++.++|+||+++++++....
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~   81 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ   81 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence            34678889999999999999987755444456789999987543  2233456888999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC
Q 023430          189 KLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~  252 (282)
                      ..++++||+.+++|..++...                ..+++..+..++.|++.||.|||++||+||||||+|||+++++
T Consensus        82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~  161 (283)
T cd05091          82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL  161 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence            999999999999999888531                2477888999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccccc---------chhheeeccCccc
Q 023430          253 HVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      .+||+|||+++....         ..+++.|||||.+
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  198 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAI  198 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHH
Confidence            999999998863221         1336789999976

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.97  E-value=1.9e-29  Score=213.48  Aligned_cols=163  Identities=28%  Similarity=0.515  Sum_probs=140.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||++++.     ..+..+|+|.++....  ....+.+.+|+.+++.++|+||+++++.+...+.+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   73 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHV-----NSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHL   73 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEc-----CCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEE
Confidence            5889999999999999999976     3567799998865432  23345677899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          191 YLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      |++|||+++++|..++...  ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++++|||++..... 
T Consensus        74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  153 (255)
T cd08219          74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP  153 (255)
T ss_pred             EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence            9999999999998888653  3478999999999999999999999999999999999999999999999999863321 


Q ss_pred             ------chhheeeccCccc
Q 023430          268 ------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ------~~~~~~~~ape~~  280 (282)
                            ..++..|||||.+
T Consensus       154 ~~~~~~~~~~~~~~aPE~~  172 (255)
T cd08219         154 GAYACTYVGTPYYVPPEIW  172 (255)
T ss_pred             ccccccccCCccccCHHHH
Confidence                  2468889999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.97  E-value=8.8e-31  Score=205.62  Aligned_cols=164  Identities=24%  Similarity=0.336  Sum_probs=135.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh-cCCCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~  188 (282)
                      ++...+..||+|++|.|-+.++.     .++.+.|+|.++....  ....+++.+|+.+..+ ..+|.+|.+||.+..+.
T Consensus        46 d~L~~i~elGrGayG~vekmrh~-----~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg  118 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHI-----QSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG  118 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeec-----cCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence            45555678999999999888877     6788999999876532  2334556678876554 46999999999999999


Q ss_pred             EEEEEEeccCCCchHHH----HHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          189 KLYLILDFINGGHLFFH----LYRQGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~----l~~~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .+||.||.|.- +|..+    +.+.+.++|..+-+++..+..||.|||++ .|||||+||+|||++.+|+||+||||+|.
T Consensus       119 dvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG  197 (282)
T KOG0984|consen  119 DVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG  197 (282)
T ss_pred             cEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence            99999999964 55333    33456799999999999999999999977 79999999999999999999999999996


Q ss_pred             cccc------chhheeeccCcccc
Q 023430          264 NQLC------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~------~~~~~~~~ape~~~  281 (282)
                      -...      |.||..|||||.+|
T Consensus       198 ~L~dSiAkt~daGCkpYmaPEri~  221 (282)
T KOG0984|consen  198 YLVDSIAKTMDAGCKPYMAPERIN  221 (282)
T ss_pred             eehhhhHHHHhcCCCccCChhhcC
Confidence            3322      58999999999985

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=1.9e-29  Score=214.52  Aligned_cols=166  Identities=21%  Similarity=0.333  Sum_probs=143.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|...     .++..||+|.++..........+.+.+|+++++.++|+||+++++.+...+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICL-----LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEc-----CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence            57999999999999999999976     3567899998875443444446678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          190 LYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .++||||+++++|..++..    ...+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~  156 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence            9999999999999988864    234789999999999999999999999999999999999999999999999988532


Q ss_pred             c-------cchhheeeccCccc
Q 023430          266 L-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~-------~~~~~~~~~ape~~  280 (282)
                      .       ...++..|+|||.+
T Consensus       157 ~~~~~~~~~~~~~~~y~apE~~  178 (267)
T cd08224         157 SSKTTAAHSLVGTPYYMSPERI  178 (267)
T ss_pred             cCCCcccceecCCccccCHHHh
Confidence            1       12568889999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.97  E-value=5.2e-30  Score=218.20  Aligned_cols=166  Identities=20%  Similarity=0.315  Sum_probs=143.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||++.++     ..+..++||.+...........+.+.+|+.+++.++|+||+++++++...+.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCL-----LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeec-----CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe
Confidence            57888999999999999999976     3567899998876443344455678889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          190 LYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .+++|||+++++|..++..    ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++++|||++...
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence            9999999999999888763    345889999999999999999999999999999999999999999999999987532


Q ss_pred             c-------cchhheeeccCccc
Q 023430          266 L-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~-------~~~~~~~~~ape~~  280 (282)
                      .       ...++..|+|||.+
T Consensus       157 ~~~~~~~~~~~~~~~~~ape~~  178 (267)
T cd08229         157 SSKTTAAHSLVGTPYYMSPERI  178 (267)
T ss_pred             ccCCcccccccCCcCccCHHHh
Confidence            1       12568899999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=8.9e-30  Score=219.21  Aligned_cols=163  Identities=26%  Similarity=0.360  Sum_probs=132.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc---CCCCeeeeeEEEEe-
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV---THPFIVQLRYSFQT-  186 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~-  186 (282)
                      +|++.+.||+|+||.||+|+++     .+++.||+|.+....... .....+.+|+.+++.+   +|+||+++++++.. 
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~   74 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDP-----HSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATS   74 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEEC-----CCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence            4889999999999999999977     456789999987543211 1122345677776655   69999999998764 


Q ss_pred             ----CCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          187 ----RSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       187 ----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                          ....+++|||+.+ +|..++...  ..+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||
T Consensus        75 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg  153 (288)
T cd07863          75 RTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFG  153 (288)
T ss_pred             cCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccC
Confidence                3468999999985 788877653  348999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc------chhheeeccCccc
Q 023430          261 NSHNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~------~~~~~~~~ape~~  280 (282)
                      ++....+      ..++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (288)
T cd07863         154 LARIYSCQMALTPVVVTLWYRAPEVL  179 (288)
T ss_pred             ccccccCcccCCCccccccccCchHh
Confidence            9864322      2568899999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=9e-30  Score=234.70  Aligned_cols=164  Identities=23%  Similarity=0.418  Sum_probs=141.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEe-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQT-  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~-  186 (282)
                      .+-|++.++||.|.+|.||+++.+     ..+...|+|++..+.    +..+++..|..+|+... |||++.+|++|.. 
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~-----~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHV-----KTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeee-----ecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            457999999999999999999987     456778999887653    23345777888988874 9999999999863 


Q ss_pred             ----CCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          187 ----RSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       187 ----~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                          ++++|||||||.||+.-++++.  ...+.|..+..|++.++.||.+||...+||||||-.|||++.+|.||++|||
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFG  168 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFG  168 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeee
Confidence                4689999999999999998865  4568999999999999999999999999999999999999999999999999


Q ss_pred             ccccc-------ccchhheeeccCcccc
Q 023430          261 NSHNQ-------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       261 ~s~~~-------~~~~~~~~~~ape~~~  281 (282)
                      +|++.       ....||+.|||||++.
T Consensus       169 vSaQldsT~grRnT~iGtP~WMAPEVia  196 (953)
T KOG0587|consen  169 VSAQLDSTVGRRNTFIGTPYWMAPEVIA  196 (953)
T ss_pred             eeeeeecccccccCcCCCcccccceeee
Confidence            99643       2337899999999873

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=1.2e-29  Score=215.74  Aligned_cols=167  Identities=23%  Similarity=0.277  Sum_probs=142.5

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+...+|.+.+.||+|+||.||+|.++     ..+..+|+|++..+.    .....+.+|+.+++.++|+||+++++++.
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (263)
T cd05052           2 EMERTDITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCT   72 (263)
T ss_pred             CCchHHeEEeeecCCcccceEEEEEEe-----cCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEc
Confidence            345567999999999999999999976     356779999886542    22355788999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ..+.++++|||+++++|.+++...  ..+++..++.++.|++.||.|||+++++||||||+|||+++++.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~  152 (263)
T cd05052          73 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR  152 (263)
T ss_pred             CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence            999999999999999999988653  357889999999999999999999999999999999999999999999999986


Q ss_pred             ccccc--------hhheeeccCcccc
Q 023430          264 NQLCC--------FFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~~--------~~~~~~~ape~~~  281 (282)
                      .....        .++..|+|||.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~y~aPE~~~  178 (263)
T cd05052         153 LMTGDTYTAHAGAKFPIKWTAPESLA  178 (263)
T ss_pred             ccccceeeccCCCCCccccCCHHHhc
Confidence            43222        2356799999763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.97  E-value=1.2e-29  Score=214.23  Aligned_cols=159  Identities=19%  Similarity=0.299  Sum_probs=134.8

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      +.||+|+||.||+|.++     ..++.+|+|.+....  .......+.+|+++++.++|+||+++++++......|+|||
T Consensus         1 ~~lg~g~~g~vy~~~~~-----~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   73 (252)
T cd05084           1 ERIGRGNFGEVFSGRLR-----ADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME   73 (252)
T ss_pred             CccCcccCccEEEEEEe-----cCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEe
Confidence            36899999999999876     356779999876432  23344568889999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc------
Q 023430          196 FINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC------  268 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~------  268 (282)
                      |+++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......      
T Consensus        74 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  153 (252)
T cd05084          74 LVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG  153 (252)
T ss_pred             eccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence            999999999987643 5889999999999999999999999999999999999999999999999998642211      


Q ss_pred             ---hhheeeccCcccc
Q 023430          269 ---FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ---~~~~~~~ape~~~  281 (282)
                         .....|+|||.++
T Consensus       154 ~~~~~~~~y~aPE~~~  169 (252)
T cd05084         154 GMKQIPVKWTAPEALN  169 (252)
T ss_pred             CCCCCceeecCchhhc
Confidence               1135699999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=1.4e-29  Score=217.56  Aligned_cols=163  Identities=25%  Similarity=0.388  Sum_probs=138.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||+|+.+     ..+..||+|++..... .....+.+.+|+.+++.++|+||+++++++..++..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   74 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNK-----KTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRL   74 (285)
T ss_pred             CceEeeEecccCceEEEEEEEC-----CCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeE
Confidence            5889999999999999999876     3567899999865432 222335577899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          191 YLILDFINGGHLFFHLYRQ---GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      |+||||+. ++|.+++...   ..+++..+..++.|++.||.|||+++|+||||||+|||++.+|.++|+|||++.... 
T Consensus        75 ~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  153 (285)
T cd07861          75 YLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI  153 (285)
T ss_pred             EEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence            99999997 5787777542   458999999999999999999999999999999999999999999999999986321 


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...+++.|+|||.+
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~  173 (285)
T cd07861         154 PVRVYTHEVVTLWYRAPEVL  173 (285)
T ss_pred             CcccccCCcccccccChHHh
Confidence                  22558899999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.97  E-value=1.6e-29  Score=217.23  Aligned_cols=165  Identities=21%  Similarity=0.289  Sum_probs=142.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+++++     ..++.||+|++..... .....+.+.+|+.+++.++|+||+++++.+.....
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~   74 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNR-----ETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRK   74 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCE
Confidence            47999999999999999999876     3567899998865432 12223457789999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      .++||||++++.|..++.....+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++....   
T Consensus        75 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07847          75 LHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG  154 (286)
T ss_pred             EEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence            99999999998888777666679999999999999999999999999999999999999999999999999986422   


Q ss_pred             ----cchhheeeccCccc
Q 023430          267 ----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ----~~~~~~~~~ape~~  280 (282)
                          ...++..|+|||.+
T Consensus       155 ~~~~~~~~~~~~~aPE~~  172 (286)
T cd07847         155 DDYTDYVATRWYRAPELL  172 (286)
T ss_pred             ccccCcccccccCCHHHH
Confidence                12467889999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.97  E-value=7.8e-30  Score=229.58  Aligned_cols=160  Identities=24%  Similarity=0.402  Sum_probs=136.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-C-----CCeeeeeEEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-H-----PFIVQLRYSF  184 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~nIv~l~~~~  184 (282)
                      +|++++.||+|+||.|.+|.+.     .+++.||||+++...    ...++-..|+.+|..|+ |     -|||+++++|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~-----~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F  257 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDH-----KTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF  257 (586)
T ss_pred             EEEEEEEecccccceeEEEEec-----CCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence            5889999999999999999977     567889999998654    33344566999999987 4     3999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC--CcEEEEecC
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD--GHVMAAHSL  260 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~--~~v~l~Dfg  260 (282)
                      ...+++|||+|++.. +|+++++..+  .++...++.++.||+.||.+||+.+|||+||||+||||.+-  ..|||+|||
T Consensus       258 ~fr~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFG  336 (586)
T KOG0667|consen  258 YFRNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFG  336 (586)
T ss_pred             ccccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecc
Confidence            999999999999854 8999998653  48899999999999999999999999999999999999764  469999999


Q ss_pred             cccccccc--hh--heeeccCccc
Q 023430          261 NSHNQLCC--FF--FFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~~--~~--~~~~~ape~~  280 (282)
                      .|...-..  .|  +.-|=|||+|
T Consensus       337 SSc~~~q~vytYiQSRfYRAPEVI  360 (586)
T KOG0667|consen  337 SSCFESQRVYTYIQSRFYRAPEVI  360 (586)
T ss_pred             cccccCCcceeeeeccccccchhh
Confidence            99643222  44  8999999987

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.2e-29  Score=211.78  Aligned_cols=164  Identities=26%  Similarity=0.434  Sum_probs=143.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.+.     ..+..+++|++....   ....+.+.+|+.+++.++||||+++++.+....
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   73 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDI-----ATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD   73 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEec-----CCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC
Confidence            368999999999999999999876     345679999987543   224567889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      .+|++|||+++++|..++... ..+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++.... 
T Consensus        74 ~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  153 (262)
T cd06613          74 KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA  153 (262)
T ss_pred             EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhh
Confidence            999999999999999988765 679999999999999999999999999999999999999999999999999886321 


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~y~~Pe~~  173 (262)
T cd06613         154 TIAKRKSFIGTPYWMAPEVA  173 (262)
T ss_pred             hhhccccccCCccccCchhh
Confidence                  11457789999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=1.4e-29  Score=222.97  Aligned_cols=174  Identities=16%  Similarity=0.267  Sum_probs=142.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCC--CCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDG--DSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      +.+...+|++.+.||+|+||.||+|++.+....  .....+|+|.+....  .....+.+.+|+.+++++ +|+||++++
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~   84 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLL   84 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeee
Confidence            445556899999999999999999987643321  123468999876432  223446688899999999 799999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      +++...+..+++|||+++|+|.+++.+..                .+++..+..++.|++.||.|||++||+||||||+|
T Consensus        85 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N  164 (334)
T cd05100          85 GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN  164 (334)
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence            99999999999999999999999987532                36778888999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCccccccc---------chhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      ||++.++.++|+|||+++....         ..++..|||||++
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  208 (334)
T cd05100         165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEAL  208 (334)
T ss_pred             EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHh
Confidence            9999999999999999864221         1224679999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.9e-29  Score=214.17  Aligned_cols=165  Identities=20%  Similarity=0.241  Sum_probs=140.5

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||+|.+.      .+..||+|.++....    ..+.+.+|+.+++.++|+||+++++++..
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   72 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWN------NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTL   72 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEec------CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEec
Confidence            44568999999999999999999864      235699999865432    23457789999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+..+++|||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~  152 (261)
T cd05068          73 EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARV  152 (261)
T ss_pred             CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence            999999999999999999987644  589999999999999999999999999999999999999999999999998864


Q ss_pred             ccc-----chh---heeeccCcccc
Q 023430          265 QLC-----CFF---FFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~-----~~~---~~~~~ape~~~  281 (282)
                      ...     ..+   ...|||||.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~  177 (261)
T cd05068         153 IKEDIYEAREGAKFPIKWTAPEAAL  177 (261)
T ss_pred             ccCCcccccCCCcCceeccCccccc
Confidence            321     122   35799999763

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.97  E-value=1.5e-29  Score=215.96  Aligned_cols=160  Identities=21%  Similarity=0.213  Sum_probs=132.3

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      +.||+|+||.||+|.+..   ......+|+|.++....  ......+.+|+.+++.++||||+++++++......++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~---~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNS---GYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcC---CCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEE
Confidence            358999999999998653   23456799998865432  2223457789999999999999999999998889999999


Q ss_pred             ccCCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          196 FINGGHLFFHLYRQG-----IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      |+++|+|.+++....     ..++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....   
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~  155 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY  155 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence            999999999886532     345677888999999999999999999999999999999999999999999864222   


Q ss_pred             ------chhheeeccCccc
Q 023430          268 ------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ------~~~~~~~~ape~~  280 (282)
                            ..++..|||||.+
T Consensus       156 ~~~~~~~~~~~~y~aPE~~  174 (269)
T cd05087         156 YVTPDQLWVPLRWIAPELV  174 (269)
T ss_pred             eecCCCcCCcccccCHhHh
Confidence                  1346789999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.97  E-value=3.2e-29  Score=212.09  Aligned_cols=164  Identities=27%  Similarity=0.410  Sum_probs=142.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|+.++.||+|+||.||.++..     ..+..+++|.+...... ....+.+.+|+++++.++|+||+++++++...+.+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   74 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRT-----EDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTL   74 (256)
T ss_pred             CceEeeEecccCCceEEEEEEc-----CCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeE
Confidence            5899999999999999998866     45677999988654422 23445678899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          191 YLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      +++|||+++++|.+++.+.  ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..... 
T Consensus        75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          75 LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence            9999999999999998764  4588999999999999999999999999999999999999999999999998864322 


Q ss_pred             ------chhheeeccCccc
Q 023430          268 ------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ------~~~~~~~~ape~~  280 (282)
                            ..++..|+|||.+
T Consensus       155 ~~~~~~~~~~~~y~ape~~  173 (256)
T cd08221         155 YSMAETVVGTPYYMSPELC  173 (256)
T ss_pred             cccccccCCCccccCHhhc
Confidence                  2468999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.6e-30  Score=243.92  Aligned_cols=173  Identities=21%  Similarity=0.278  Sum_probs=148.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +.....++.+.||+|+||.||.|.............||||.+++..  +......|.+|..+|+.++|||||+++|++.+
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~  766 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD  766 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence            3456788899999999999999998865443335568999887653  45566778999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                      ....+|++|||+||+|..+|.+.       ..+...+.+.++.||++|+.||+++++|||||..+|+||+....|||+||
T Consensus       767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF  846 (1025)
T KOG1095|consen  767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF  846 (1025)
T ss_pred             CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence            99999999999999999999864       24788999999999999999999999999999999999999999999999


Q ss_pred             Ccccccccc-----hh----heeeccCcccc
Q 023430          260 LNSHNQLCC-----FF----FFLFLGGGVFN  281 (282)
Q Consensus       260 g~s~~~~~~-----~~----~~~~~ape~~~  281 (282)
                      |+|+.....     .+    -.+|||||.|.
T Consensus       847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~  877 (1025)
T KOG1095|consen  847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLK  877 (1025)
T ss_pred             chhHhhhhchheeccCccccceecCCHHHHh
Confidence            999833222     22    36899999983

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.97  E-value=1.4e-29  Score=219.58  Aligned_cols=164  Identities=18%  Similarity=0.309  Sum_probs=139.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+++     .++..||+|.+.....  ......+.+|+.+++.++|+||+++++++...+
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~   77 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSK-----LTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK   77 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEc-----CCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCC
Confidence            468999999999999999999876     3567899999865432  222334667999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ..++||||+. ++|..++... ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++.... 
T Consensus        78 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  156 (301)
T cd07873          78 SLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSI  156 (301)
T ss_pred             eEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence            9999999997 4888877653 458899999999999999999999999999999999999999999999999986422 


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...+++.|+|||.+
T Consensus       157 ~~~~~~~~~~~~~y~~PE~~  176 (301)
T cd07873         157 PTKTYSNEVVTLWYRPPDIL  176 (301)
T ss_pred             CCCcccccceeecccCcHHH
Confidence                  22458899999975

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.97  E-value=2.4e-29  Score=214.51  Aligned_cols=169  Identities=21%  Similarity=0.218  Sum_probs=142.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.++..+  .....||+|.+....  .....+.+..|+.+++.++||||+++++++..+.
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~   78 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPG--KREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR   78 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCC--CCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC
Confidence            457999999999999999999977432  234579999986542  2334566889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..++||||+++++|..++... +.+++.+++.++.|++.||.|||++|++||||||+|||++.++.++++|||++.....
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence            999999999999999888753 4589999999999999999999999999999999999999999999999998853221


Q ss_pred             c---------hh---heeeccCcccc
Q 023430          268 C---------FF---FFLFLGGGVFN  281 (282)
Q Consensus       268 ~---------~~---~~~~~ape~~~  281 (282)
                      .         .+   ...|+|||.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (269)
T cd05065         159 DTSDPTYTSSLGGKIPIRWTAPEAIA  184 (269)
T ss_pred             CccccccccccCCCcceeecCHhHhc
Confidence            1         11   35799999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.97  E-value=1.7e-29  Score=216.95  Aligned_cols=159  Identities=37%  Similarity=0.638  Sum_probs=132.1

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHH---hcCCCCeeeeeEEEEeCCEEEEE
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT---KVTHPFIVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~---~l~h~nIv~l~~~~~~~~~~~lv  193 (282)
                      .||+|+||.||++...     ..+..+|+|.+.+.............+|..+++   ..+|+||+.+++.+...+..++|
T Consensus         1 ~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv   75 (279)
T cd05633           1 IIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI   75 (279)
T ss_pred             CcccCCCeEEEEEEEC-----CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence            4899999999999876     356789999987654322222223344444433   34799999999999999999999


Q ss_pred             EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc-----ccc
Q 023430          194 LDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ-----LCC  268 (282)
Q Consensus       194 ~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~-----~~~  268 (282)
                      |||+++++|..++..++.+++..+..++.|++.||.|||+++|+||||||+|||++.++.++++|||++...     ...
T Consensus        76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  155 (279)
T cd05633          76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS  155 (279)
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence            999999999999988888999999999999999999999999999999999999999999999999998532     122


Q ss_pred             hhheeeccCccc
Q 023430          269 FFFFLFLGGGVF  280 (282)
Q Consensus       269 ~~~~~~~ape~~  280 (282)
                      .|+..|||||.+
T Consensus       156 ~~~~~y~aPE~~  167 (279)
T cd05633         156 VGTHGYMAPEVL  167 (279)
T ss_pred             CCCcCccCHHHh
Confidence            579999999976

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.97  E-value=2.8e-29  Score=216.81  Aligned_cols=164  Identities=28%  Similarity=0.446  Sum_probs=142.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .+.|+++++||+|+||.||+++..     ..+..+++|++....   ....+.+.+|+.+++.++|+||+++++.+..++
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~-----~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   82 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNK-----ETGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG   82 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEEC-----CCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence            356999999999999999999876     356789999986542   334566788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..|+||||+++++|..++.+ ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++.....
T Consensus        83 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  162 (292)
T cd06644          83 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK  162 (292)
T ss_pred             eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence            99999999999999877754 35689999999999999999999999999999999999999999999999998864221


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..++..|+|||.+
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~  182 (292)
T cd06644         163 TLQRRDSFIGTPYWMAPEVV  182 (292)
T ss_pred             cccccceecCCccccCceee
Confidence                   1467899999986

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=3.3e-29  Score=215.32  Aligned_cols=167  Identities=20%  Similarity=0.294  Sum_probs=139.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--C
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--R  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~  187 (282)
                      .+|++.+.||+|+||.||++..+... ...+..||+|.+....   ....+.+.+|+++++.++|+||+++++++..  .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   79 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQ-DNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR   79 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCc-CCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence            47999999999999999999865332 2456789999986542   2334668899999999999999999987653  3


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ..+++||||+++++|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081          80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence            4689999999999999998764 458999999999999999999999999999999999999999999999999987422


Q ss_pred             cc----------hhheeeccCccc
Q 023430          267 CC----------FFFFLFLGGGVF  280 (282)
Q Consensus       267 ~~----------~~~~~~~ape~~  280 (282)
                      ..          .+...|+|||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~  183 (284)
T cd05081         160 QDKEYYKVREPGESPIFWYAPESL  183 (284)
T ss_pred             CCCcceeecCCCCCceEeeCHHHh
Confidence            11          224569999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=3.5e-29  Score=231.53  Aligned_cols=172  Identities=17%  Similarity=0.243  Sum_probs=129.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCC----------CCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCee
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGD----------SDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIV  178 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv  178 (282)
                      .++|++++.||+|+||+||+|..+......          .+...+.+.+.+...........+.+|+.+|+.++|+||+
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence            468999999999999999998765321100          0011111111111111223345678999999999999999


Q ss_pred             eeeEEEEeCCEEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc
Q 023430          179 QLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH  253 (282)
Q Consensus       179 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~  253 (282)
                      ++++++...+..|+|+|++.+ +|..++...     ......+++.++.||+.||.|||++|||||||||+|||++.++.
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~  305 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK  305 (501)
T ss_pred             cEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence            999999999999999999854 666666432     22345678889999999999999999999999999999999999


Q ss_pred             EEEEecCcccccc--------cchhheeeccCcccc
Q 023430          254 VMAAHSLNSHNQL--------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       254 v~l~Dfg~s~~~~--------~~~~~~~~~ape~~~  281 (282)
                      +||+|||++....        ...|+..|||||.+.
T Consensus       306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~  341 (501)
T PHA03210        306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILA  341 (501)
T ss_pred             EEEEeCCCceecCcccccccccccCCcCCCCchhhc
Confidence            9999999996321        125799999999874

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.97  E-value=2.2e-29  Score=215.96  Aligned_cols=170  Identities=20%  Similarity=0.236  Sum_probs=139.9

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +...+|++.+.||+|+||.||+|++...+. .....||+|++....  .....+.+.+|+.+++.+.|+||+++++++..
T Consensus         4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~-~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   80 (279)
T cd05109           4 LKETELKKVKVLGSGAFGTVYKGIWIPDGE-NVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT   80 (279)
T ss_pred             cchhheeeeeecCCCCCceEEEEEEecCCC-ccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC
Confidence            345689999999999999999999774332 123358999986543  22334568889999999999999999998865


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                       ...+++|||+++|+|.+++... +.+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        81 -~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          81 -STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             -CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence             4578999999999999998764 46899999999999999999999999999999999999999999999999998632


Q ss_pred             cc---------chhheeeccCccc
Q 023430          266 LC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~---------~~~~~~~~ape~~  280 (282)
                      ..         ..+...||+||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~  183 (279)
T cd05109         160 DIDETEYHADGGKVPIKWMALESI  183 (279)
T ss_pred             ccccceeecCCCccchhhCCHHHh
Confidence            21         1235679999986

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.97  E-value=1.2e-29  Score=215.12  Aligned_cols=163  Identities=23%  Similarity=0.326  Sum_probs=138.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|++++.||+|+||.||++++.+      ...+|+|.+.....    ..+.+.+|+.+++.++||||+++++++....
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~------~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   72 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRG------QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR   72 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecC------CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence            4579999999999999999998652      23499998865432    1245788999999999999999999999888


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..+++|||+.+++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+|||++.++.++|+|||.++....
T Consensus        73 ~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05113          73 PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD  152 (256)
T ss_pred             CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCC
Confidence            999999999999999998764 4689999999999999999999999999999999999999999999999998863322


Q ss_pred             c--------hhheeeccCcccc
Q 023430          268 C--------FFFFLFLGGGVFN  281 (282)
Q Consensus       268 ~--------~~~~~~~ape~~~  281 (282)
                      .        .++..|++||.+.
T Consensus       153 ~~~~~~~~~~~~~~y~~pe~~~  174 (256)
T cd05113         153 DEYTSSVGSKFPVRWSPPEVLL  174 (256)
T ss_pred             CceeecCCCccChhhCCHHHHh
Confidence            1        2346799999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.97  E-value=2e-29  Score=216.54  Aligned_cols=171  Identities=20%  Similarity=0.261  Sum_probs=143.0

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ...+|.+.++||+|+||.||++..........+..+++|.+....   ....+.+.+|+++++.++|+||+++++++...
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   79 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEG   79 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence            345788999999999999999986543333456678999876432   23345688999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG---------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~  252 (282)
                      ...+++|||+++++|.+++....               .+++..+..++.|++.||.|||++||+||||||+|||+++++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~  159 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL  159 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence            99999999999999999987643               378899999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccccc---------chhheeeccCcccc
Q 023430          253 HVMAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      .++|+|||++.....         ..++..|+|||.+.
T Consensus       160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL  197 (280)
T ss_pred             CEEECCCCceeEcCCCceeecCCCccccccccCHHHhc
Confidence            999999999863221         12357899999764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.97  E-value=3.8e-29  Score=211.34  Aligned_cols=164  Identities=27%  Similarity=0.420  Sum_probs=142.3

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|.+.+.||+|+||.||++.++     ..+..|++|.+...... ....+.+.+|+.+++.++|+||+++++.+...+..
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   74 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRK-----ADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKL   74 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEc-----CCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEE
Confidence            5888999999999999999976     35678999998754332 33455688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          191 YLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      |+||||+++++|.+++...  ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....  
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             EEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence            9999999999999998764  568899999999999999999999999999999999999999999999999876321  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...++..|+|||++
T Consensus       155 ~~~~~~~~~~~~y~aPE~~  173 (256)
T cd08529         155 TNFANTIVGTPYYLSPELC  173 (256)
T ss_pred             cchhhccccCccccCHHHh
Confidence                 12567889999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=2e-29  Score=220.05  Aligned_cols=174  Identities=17%  Similarity=0.261  Sum_probs=142.4

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCC--CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      +.+..++|.+.+.||+|+||.||++++.+...  ......+|+|.+....  .......+..|+.+++.+ +|+||++++
T Consensus         7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~   84 (314)
T cd05099           7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLL   84 (314)
T ss_pred             ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence            34455789999999999999999998654321  1244568999886542  223345678899999999 599999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      +++...+..|++|||+++|+|..++...                ..+++..+..++.|++.||.|||++||+||||||+|
T Consensus        85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N  164 (314)
T cd05099          85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN  164 (314)
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence            9999889999999999999999998653                237888899999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCccccccc-------c--hhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQLC-------C--FFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~~-------~--~~~~~~~ape~~  280 (282)
                      ||++.++.++|+|||+++....       .  .++..|||||.+
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  208 (314)
T cd05099         165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEAL  208 (314)
T ss_pred             EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHH
Confidence            9999999999999999964321       1  223579999976

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=1e-29  Score=215.34  Aligned_cols=161  Identities=22%  Similarity=0.331  Sum_probs=137.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      .+|++.+.||+|+||.||++.++      ....+|+|++......    ...+.+|+.+++.++|+||+++++++...+.
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   73 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR------GKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRP   73 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec------CCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence            46889999999999999999865      2346899988654321    2346779999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC  268 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~  268 (282)
                      .++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.....
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~  153 (256)
T cd05059          74 IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD  153 (256)
T ss_pred             eEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccc
Confidence            99999999999999998753 46889999999999999999999999999999999999999999999999998643321


Q ss_pred             --------hhheeeccCccc
Q 023430          269 --------FFFFLFLGGGVF  280 (282)
Q Consensus       269 --------~~~~~~~ape~~  280 (282)
                              .++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~y~~Pe~~  173 (256)
T cd05059         154 QYTSSQGTKFPVKWAPPEVF  173 (256)
T ss_pred             cccccCCCCCCccccCHHHh
Confidence                    223579999976

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=9.8e-30  Score=218.85  Aligned_cols=164  Identities=24%  Similarity=0.402  Sum_probs=141.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++++.||+|+||.||++++.     ..+..||+|.+....  .....+.+.+|+.+++.++|+||+++++.+...+.
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~-----~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   73 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHR-----PTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGA   73 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEc-----CCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCe
Confidence            36889999999999999999876     356789999886532  22334568889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQ---GIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .|+||||+++++|..++...   ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++...
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  153 (286)
T cd06622          74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99999999999998888653   368999999999999999999997 59999999999999999999999999998642


Q ss_pred             cc-----chhheeeccCccc
Q 023430          266 LC-----CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~-----~~~~~~~~ape~~  280 (282)
                      ..     ..++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~  173 (286)
T cd06622         154 VASLAKTNIGCQSYMAPERI  173 (286)
T ss_pred             cCCccccCCCccCccCcchh
Confidence            11     2467899999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.97  E-value=1.7e-29  Score=217.91  Aligned_cols=168  Identities=18%  Similarity=0.266  Sum_probs=139.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||+|.............+++|.+.....  ....+.+.+|+.+++.++||||+++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL   78 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence            4788899999999999999876443333446688888865432  23345688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCce
Q 023430          191 YLILDFINGGHLFFHLYRQ------------------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENI  246 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~------------------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NI  246 (282)
                      +++|||+.+++|.+++...                        ..+++..+..++.|++.||.|||+++|+||||||+||
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni  158 (290)
T cd05045          79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV  158 (290)
T ss_pred             EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence            9999999999999887642                        2367888999999999999999999999999999999


Q ss_pred             EEcCCCcEEEEecCccccccc---------chhheeeccCccc
Q 023430          247 LMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       247 Ll~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      |+++++.++|+|||++.....         ..++..|||||.+
T Consensus       159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~  201 (290)
T cd05045         159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL  201 (290)
T ss_pred             EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHH
Confidence            999999999999999864211         1236789999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=1.2e-29  Score=221.62  Aligned_cols=157  Identities=24%  Similarity=0.361  Sum_probs=127.1

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--CCEEEE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--RSKLYL  192 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~l  192 (282)
                      .++||+|+||.||+|+++..   ..+..||+|.+.....     ...+.+|+.+|+.++||||+++++++..  ...+|+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~---~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~l   77 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDG---KDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   77 (317)
T ss_pred             ccccccCCCeEEEEEEEccC---CCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEE
Confidence            35799999999999987632   3557799998865421     2336679999999999999999998854  457899


Q ss_pred             EEeccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE----cCCCcEEEEec
Q 023430          193 ILDFINGGHLFFHLYRQ---------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM----DSDGHVMAAHS  259 (282)
Q Consensus       193 v~e~~~~g~L~~~l~~~---------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl----~~~~~v~l~Df  259 (282)
                      +|||+.+ +|..++...         ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+||
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~Df  156 (317)
T cd07868          78 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM  156 (317)
T ss_pred             EEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence            9999865 777766432         247899999999999999999999999999999999999    45678999999


Q ss_pred             Ccccccc----------cchhheeeccCccc
Q 023430          260 LNSHNQL----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~----------~~~~~~~~~ape~~  280 (282)
                      |+++...          ...+++.|||||++
T Consensus       157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~  187 (317)
T cd07868         157 GFARLFNSPLKPLADLDPVVVTFWYRAPELL  187 (317)
T ss_pred             CceeccCCCCccccccCCccccccccCCHHH
Confidence            9985321          12568899999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-31  Score=252.83  Aligned_cols=164  Identities=26%  Similarity=0.404  Sum_probs=143.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +++-...||.|.||.||.|...     .++...|+|.++..... ......+.+|..+|..++|||+|++||+-...+.+
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~-----~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNL-----DTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred             eeccccccCCcceeeeEEeecC-----CccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence            3555668999999999999876     46678999988765433 34445678899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc--
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC--  268 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~--  268 (282)
                      +|.||||++|+|.+.+...+..++...+.+..|++.|+.|||++|||||||||+||||+.+|-+|+.|||.|......  
T Consensus      1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred             HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence            999999999999999988878888888999999999999999999999999999999999999999999998532222  


Q ss_pred             ---------hhheeeccCccc
Q 023430          269 ---------FFFFLFLGGGVF  280 (282)
Q Consensus       269 ---------~~~~~~~ape~~  280 (282)
                               .||+.|||||++
T Consensus      1390 ~~~~el~~~~GT~~YMAPEvi 1410 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVI 1410 (1509)
T ss_pred             cCCHHHHhhcCCchhcCchhh
Confidence                     789999999987

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.9e-29  Score=212.40  Aligned_cols=163  Identities=20%  Similarity=0.304  Sum_probs=142.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +...+|++.+.||+|+||.||+|...       +..||+|.+.....    ..+.+.+|+.+++.++|+||+++++++..
T Consensus         3 ~~~~~~~~~~~ig~g~~g~v~~~~~~-------~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   71 (256)
T cd05039           3 INSKELKLGATIGKGEFGDVMLGDYR-------GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQ   71 (256)
T ss_pred             cChhhccceeeeecCCCceEEEEEec-------CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcC
Confidence            44568999999999999999999854       46799999876532    34668889999999999999999999998


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+..++||||+++++|.+++....  .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||.++.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~  151 (256)
T cd05039          72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE  151 (256)
T ss_pred             CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccc
Confidence            899999999999999999987665  689999999999999999999999999999999999999999999999999975


Q ss_pred             cccc----hhheeeccCccc
Q 023430          265 QLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~~----~~~~~~~ape~~  280 (282)
                      ....    .+...|+|||.+
T Consensus       152 ~~~~~~~~~~~~~~~ape~~  171 (256)
T cd05039         152 ASQGQDSGKLPVKWTAPEAL  171 (256)
T ss_pred             cccccccCCCcccccCchhh
Confidence            4221    335679999976

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.97  E-value=1.9e-29  Score=221.53  Aligned_cols=161  Identities=19%  Similarity=0.334  Sum_probs=136.1

Q ss_pred             EEeeeCcC--CCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          114 IFRVVGQG--AFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       114 ~~~~lG~G--~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      ++++||+|  +|++||++..+     .++..||+|++..... .....+.+.+|+.+++.++||||+++++++..++..|
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~   75 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYK-----PTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW   75 (327)
T ss_pred             hhhhccccccceEEEEEEeec-----ccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEE
Confidence            45789999  78999999877     4677899999876532 2334556888999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          192 LILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      +||||+++|+|.+++...  ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.++++||+......   
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~  155 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG  155 (327)
T ss_pred             EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence            999999999999988653  458999999999999999999999999999999999999999999999998543211   


Q ss_pred             -----------cchhheeeccCccc
Q 023430          267 -----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----------~~~~~~~~~ape~~  280 (282)
                                 ...++..|||||++
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~  180 (327)
T cd08227         156 QRLRVVHDFPKYSVKVLPWLSPEVL  180 (327)
T ss_pred             ccccccccccccccceecccChHHh
Confidence                       11346779999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.97  E-value=3.8e-29  Score=213.08  Aligned_cols=167  Identities=28%  Similarity=0.359  Sum_probs=141.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh--hhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII--KKNHVDYMKAERDILTKVTHPFIVQLRYSFQT-  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-  186 (282)
                      .+|+..+.||+|+||.||++...     ..+..|++|++......  .....+.+.+|+.+++.++|+||+++++++.. 
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   76 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDV-----DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR   76 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEc-----CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC
Confidence            47899999999999999999876     35678999988654311  22344568889999999999999999998875 


Q ss_pred             -CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 -RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                       ...++++|||+++++|.+++...+.+++.....++.|++.||.|||+++|+||||||+||+++.++.++|+|||++...
T Consensus        77 ~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          77 AEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence             3678999999999999999988778899999999999999999999999999999999999999999999999998632


Q ss_pred             c----------cchhheeeccCcccc
Q 023430          266 L----------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~----------~~~~~~~~~ape~~~  281 (282)
                      .          ...++..|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (266)
T cd06651         157 QTICMSGTGIRSVTGTPYWMSPEVIS  182 (266)
T ss_pred             ccccccCCccccCCccccccCHHHhC
Confidence            1          124688899999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=4.5e-29  Score=214.49  Aligned_cols=165  Identities=22%  Similarity=0.286  Sum_probs=136.6

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--CE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--SK  189 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~  189 (282)
                      |++.+.||+|+||+||++.+.... ...+..||+|.+....  .......+.+|+++++.++||||+++++++...  ..
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPAN-DGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG   82 (283)
T ss_pred             ceeceecccCCCcEEEEeeEcccc-CCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence            488999999999999987755322 2456789999987542  122345677899999999999999999987653  46


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      ++++|||+++++|.+++... .+++.++..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++.....  
T Consensus        83 ~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  161 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH  161 (283)
T ss_pred             EEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence            89999999999999988654 589999999999999999999999999999999999999999999999999863211  


Q ss_pred             --------chhheeeccCccc
Q 023430          268 --------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 --------~~~~~~~~ape~~  280 (282)
                              ..++..|++||.+
T Consensus       162 ~~~~~~~~~~~~~~~~~PE~~  182 (283)
T cd05080         162 EYYRVREDGDSPVFWYAVECL  182 (283)
T ss_pred             hhhccCCCCCCCceeeCHhHh
Confidence                    1345679999976

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=1.9e-29  Score=218.29  Aligned_cols=164  Identities=22%  Similarity=0.318  Sum_probs=141.3

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh--hhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII--KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      +|++.+.||+|+||.||+|.+.     ..+..||+|.+......  .......+..|+.+++.++|+||+++++++...+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDK-----ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEEC-----CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC
Confidence            4888999999999999999976     34678999999765432  1222345678999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..++||||+ +++|..++.... .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus        76 ~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          76 NINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             EEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            999999999 889999997765 789999999999999999999999999999999999999999999999999864322


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..++..|+|||.+
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~  174 (298)
T cd07841         155 PNRKMTHQVVTRWYRAPELL  174 (298)
T ss_pred             CCccccccccceeeeCHHHH
Confidence                   2457889999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-30  Score=200.19  Aligned_cols=146  Identities=23%  Similarity=0.430  Sum_probs=128.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|...++||+|+||+||+++.+     .++++||+|.++.+.. ++.......+||-+|+.++|.|||++++....+..+
T Consensus         3 ~ydkmekigegtygtvfkarn~-----~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkl   76 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNR-----ETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL   76 (292)
T ss_pred             chHHHHhhcCCcceeeEecccC-----CccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCcee
Confidence            4666789999999999999977     5678999999987653 223334567899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          191 YLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      -+|+|||.. +|..+... ++.++...++.++.|+++||.|+|+++++||||||.|+||+.+|++|++|||+++
T Consensus        77 tlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglar  149 (292)
T KOG0662|consen   77 TLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLAR  149 (292)
T ss_pred             EEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhh
Confidence            999999964 67666654 5678999999999999999999999999999999999999999999999999996

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=1.9e-29  Score=216.21  Aligned_cols=161  Identities=16%  Similarity=0.188  Sum_probs=131.7

Q ss_pred             eeCcCCCeEEEEEEEcCCC-------------------CCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe
Q 023430          117 VVGQGAFGKVFQVKKKGVD-------------------DGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI  177 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~-------------------~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI  177 (282)
                      .||+|+||.||++.+...+                   .......|++|++....   ......+.+|+.+++.++|+||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence            5899999999999754221                   11223458889886542   2233457789999999999999


Q ss_pred             eeeeEEEEeCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC----
Q 023430          178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG----  252 (282)
Q Consensus       178 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~----  252 (282)
                      +++++++......++||||+++|+|..++.+ .+.+++..+..++.|++.||.|||+++|+||||||+|||++..+    
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence            9999999999999999999999999888865 45689999999999999999999999999999999999998654    


Q ss_pred             ---cEEEEecCccccccc---chhheeeccCccc
Q 023430          253 ---HVMAAHSLNSHNQLC---CFFFFLFLGGGVF  280 (282)
Q Consensus       253 ---~v~l~Dfg~s~~~~~---~~~~~~~~ape~~  280 (282)
                         .++++|||++.....   ..++..|||||.+
T Consensus       159 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~  192 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSREERVERIPWIAPECV  192 (274)
T ss_pred             ccceeeecCCccccccccccccccCCcccCchhh
Confidence               389999998864332   2568889999976

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-30  Score=225.59  Aligned_cols=159  Identities=19%  Similarity=0.286  Sum_probs=135.5

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh--cCCCCeeeeeEEEE
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK--VTHPFIVQLRYSFQ  185 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~  185 (282)
                      .....+++++||+|.||.||+|+..       ++.||||+++..      ..+.|..|.+|.+.  ++|+||++++++-.
T Consensus       208 ~l~pl~l~eli~~Grfg~V~KaqL~-------~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ek  274 (534)
T KOG3653|consen  208 ELDPLQLLELIGRGRFGCVWKAQLD-------NRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEK  274 (534)
T ss_pred             cCCchhhHHHhhcCccceeehhhcc-------CceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhc
Confidence            3456788899999999999999865       478999998643      34567788888765  57999999998876


Q ss_pred             eCC----EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CCEeeccCCCceEEcCCC
Q 023430          186 TRS----KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC---------GIVHRDLKPENILMDSDG  252 (282)
Q Consensus       186 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~---------~iiHrDlKp~NILl~~~~  252 (282)
                      ...    .+|||+||.+.|+|.+++..+ .+++....+++..+++||+|||+-         .|+|||||..||||.+|+
T Consensus       275 r~t~~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl  353 (534)
T KOG3653|consen  275 RGTADRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL  353 (534)
T ss_pred             cCCccccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence            554    899999999999999999754 579999999999999999999963         499999999999999999


Q ss_pred             cEEEEecCcccc---------cccchhheeeccCccc
Q 023430          253 HVMAAHSLNSHN---------QLCCFFFFLFLGGGVF  280 (282)
Q Consensus       253 ~v~l~Dfg~s~~---------~~~~~~~~~~~ape~~  280 (282)
                      ...|+|||+|..         .....||.+|||||+|
T Consensus       354 TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvL  390 (534)
T KOG3653|consen  354 TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVL  390 (534)
T ss_pred             cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHH
Confidence            999999999942         2223889999999987

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.97  E-value=1.9e-29  Score=214.43  Aligned_cols=166  Identities=28%  Similarity=0.422  Sum_probs=138.0

Q ss_pred             EEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Q 023430          113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYL  192 (282)
Q Consensus       113 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l  192 (282)
                      ++.+.||.|.||.||+|.+.. .....+..|+||.+....  .....+.+.+|++.+++++||||+++++++...+..++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~l   78 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSS--SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFL   78 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTS--SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEecccc--ccccceeeeecccccccccccccccccccccccccccc
Confidence            567899999999999999884 233456779999995432  23345678889999999999999999999998888999


Q ss_pred             EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc----
Q 023430          193 ILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL----  266 (282)
Q Consensus       193 v~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~----  266 (282)
                      ||||+++|+|.+++...  ..+++.....|+.|++.||.|||+++|+|+||+++|||++.++.+||+|||++....    
T Consensus        79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~  158 (259)
T PF07714_consen   79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK  158 (259)
T ss_dssp             EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999876  668999999999999999999999999999999999999999999999999987541    


Q ss_pred             -----cchhheeeccCcccc
Q 023430          267 -----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -----~~~~~~~~~ape~~~  281 (282)
                           .......|+|||.+.
T Consensus       159 ~~~~~~~~~~~~~~aPE~~~  178 (259)
T PF07714_consen  159 YKNDSSQQLPLRYLAPEVLK  178 (259)
T ss_dssp             EEESTTSESGGGGS-HHHHH
T ss_pred             cccccccccccccccccccc
Confidence                 124478999999863

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.97  E-value=3.6e-29  Score=215.91  Aligned_cols=163  Identities=19%  Similarity=0.301  Sum_probs=136.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|.+.+.||+|+||.||+|..+     ..+..||+|++.....  ......+.+|+.+++.++|+||+++++++..+..
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~   77 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISR-----INGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKET   77 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEc-----CCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCe
Confidence            57999999999999999999876     3466899999865432  1222346679999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          190 LYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .|+||||+. ++|..++.. ...+.+..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++....  
T Consensus        78 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  156 (291)
T cd07870          78 LTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP  156 (291)
T ss_pred             EEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence            999999996 566666544 3457888899999999999999999999999999999999999999999999886321  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...++..|+|||.+
T Consensus       157 ~~~~~~~~~~~~y~aPE~~  175 (291)
T cd07870         157 SQTYSSEVVTLWYRPPDVL  175 (291)
T ss_pred             CCCCCCccccccccCCcee
Confidence                 12468899999986

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.3e-29  Score=217.44  Aligned_cols=163  Identities=29%  Similarity=0.452  Sum_probs=142.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||++.+.     ..+..+|+|.+....   ....+.+.+|+.+++.++|+||+++++.+..+..
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHK-----ETGLFAAAKIIQIES---EEELEDFMVEIDILSECKHPNIVGLYEAYFYENK   76 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEc-----CCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Confidence            57999999999999999999876     346779999986442   3344567889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .|+||||+++++|..++.+. ..+++..++.++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++..... 
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~  156 (280)
T cd06611          77 LWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST  156 (280)
T ss_pred             EEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence            99999999999999988764 4689999999999999999999999999999999999999999999999998853222 


Q ss_pred             ------chhheeeccCccc
Q 023430          268 ------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ------~~~~~~~~ape~~  280 (282)
                            ..++..|++||.+
T Consensus       157 ~~~~~~~~~~~~y~~PE~~  175 (280)
T cd06611         157 LQKRDTFIGTPYWMAPEVV  175 (280)
T ss_pred             ccccceeecchhhcCHHHH
Confidence                  1568899999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=1.7e-29  Score=217.70  Aligned_cols=172  Identities=21%  Similarity=0.289  Sum_probs=143.3

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||++.+.+...+.....+|+|++....  .....+.+.+|+.+++.++|+||+++++++...
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~   80 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG   80 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence            346899999999999999999987643333466789999986543  223345688899999999999999999999998


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG----------------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~----------------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      ...+++|||+++++|.+++....                      .+++..+..++.|++.||.|||+++++||||||+|
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n  160 (288)
T cd05050          81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN  160 (288)
T ss_pred             CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence            99999999999999999986432                      36778889999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCcccccccc---------hhheeeccCcccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVFN  281 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~~  281 (282)
                      ||++.++.++|+|||++.....+         .....|+|||.+.
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF  205 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHh
Confidence            99999999999999998642211         2356799999753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.97  E-value=2.2e-29  Score=214.38  Aligned_cols=165  Identities=23%  Similarity=0.389  Sum_probs=141.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh---hhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII---KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      +|+..+.||+|+||.||++...     .++..+|+|++......   .....+.+.+|+.+++.++|+||+++++.+...
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDV-----KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEc-----CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC
Confidence            4778899999999999999865     45677999998653311   122356788999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l~Dfg~s~~~~  266 (282)
                      +..++||||+++++|.+++.+.+.+++..+..++.|++.||.|||++|++||||||+||+++.++ .++|+|||.+....
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~  155 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA  155 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence            99999999999999999998878899999999999999999999999999999999999998776 59999999985322


Q ss_pred             c-----------chhheeeccCccc
Q 023430          267 C-----------CFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~-----------~~~~~~~~ape~~  280 (282)
                      .           ..++..|+|||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~PE~~  180 (268)
T cd06630         156 AKGTGAGEFQGQLLGTIAFMAPEVL  180 (268)
T ss_pred             cccccCCccccccccccceeCHhHh
Confidence            1           1457899999976

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.97  E-value=2.2e-29  Score=216.19  Aligned_cols=171  Identities=18%  Similarity=0.193  Sum_probs=138.1

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||+|.+...+. .....+++|.+....  .......+..|+.+++.++|+||+++++++. 
T Consensus         4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-   79 (279)
T cd05111           4 LKETELRKLKLLGSGVFGTVHKGIWIPEGD-SIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICP-   79 (279)
T ss_pred             CCHhhceeccccCccCCcceEEEEEcCCCC-ceeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-
Confidence            445689999999999999999999864322 122347788775321  2233456777888999999999999999875 


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      ....++++||+++|+|.+++... +.+++..+..++.|++.||.|||+++++||||||+|||++.++.+||+|||+++..
T Consensus        80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL  159 (279)
T ss_pred             CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence            45678999999999999999764 56899999999999999999999999999999999999999999999999999643


Q ss_pred             ccc---------hhheeeccCcccc
Q 023430          266 LCC---------FFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~~---------~~~~~~~ape~~~  281 (282)
                      ..+         .++..||+||.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~pE~~~  184 (279)
T cd05111         160 YPDDKKYFYSEHKTPIKWMALESIL  184 (279)
T ss_pred             cCCCcccccCCCCCcccccCHHHhc
Confidence            211         2356899999863

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5.3e-29  Score=211.92  Aligned_cols=167  Identities=28%  Similarity=0.380  Sum_probs=142.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechh--hhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDT--IIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      .+|++.+.||+|+||.||++.++     .++..||+|.+....  .........+.+|+++++.++|+||+++++++...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   76 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDA-----DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP   76 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEc-----CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC
Confidence            47999999999999999999876     356789999875432  11233456788999999999999999999998764


Q ss_pred             --CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 --SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                        ..++++|||+++++|.+++...+.+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||++...
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          77 EEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence              468999999999999999987777899999999999999999999999999999999999999999999999999642


Q ss_pred             cc----------chhheeeccCcccc
Q 023430          266 LC----------CFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~----------~~~~~~~~ape~~~  281 (282)
                      ..          ..++..|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (264)
T cd06653         157 QTICMSGTGIKSVTGTPYWMSPEVIS  182 (264)
T ss_pred             ccccccCccccccCCcccccCHhhhc
Confidence            11          14688999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-31  Score=216.80  Aligned_cols=169  Identities=21%  Similarity=0.317  Sum_probs=136.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHH-HHhcCCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI-LTKVTHPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~nIv~l~~~  183 (282)
                      +.+..++.+-+..||.|+||+|++..++     .+++..|||.++....  ....+++..|.+. ++.-+.||||++||+
T Consensus        59 ~~F~~~~Lqdlg~iG~G~fG~V~KM~hk-----~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa  131 (361)
T KOG1006|consen   59 HTFTSDNLQDLGEIGNGAFGTVNKMLHK-----PSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGA  131 (361)
T ss_pred             cccccchHHHHHHhcCCcchhhhhhhcC-----ccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence            3344556666788999999999999988     5788999999987653  2333456667664 555579999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHH---HHH--hcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEE
Q 023430          184 FQTRSKLYLILDFINGGHLFF---HLY--RQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~---~l~--~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~  257 (282)
                      ...++..||.||+|.- +|..   ++.  .+..++|.-+-.+....+.||.||.. ..|||||+||+|||++..|.||||
T Consensus       132 ~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLC  210 (361)
T KOG1006|consen  132 LFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLC  210 (361)
T ss_pred             hhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeee
Confidence            9999999999999964 4432   222  24568888888888899999999984 579999999999999999999999


Q ss_pred             ecCcccccc------cchhheeeccCcccc
Q 023430          258 HSLNSHNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       258 Dfg~s~~~~------~~~~~~~~~ape~~~  281 (282)
                      |||+|....      .|.||..|||||.++
T Consensus       211 DFGIcGqLv~SiAkT~daGCrpYmAPERi~  240 (361)
T KOG1006|consen  211 DFGICGQLVDSIAKTVDAGCRPYMAPERID  240 (361)
T ss_pred             cccchHhHHHHHHhhhccCCccccChhccC
Confidence            999997443      448999999999874

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.96  E-value=3.7e-29  Score=214.89  Aligned_cols=161  Identities=29%  Similarity=0.444  Sum_probs=139.1

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |++.+.||+|+||.||++.+.     ..+..+++|.+....   ....+.+.+|+++++.++|+||+++++.+...+..|
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~   78 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNK-----ETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW   78 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEEC-----CCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEE
Confidence            677889999999999999876     345678999885432   233456788999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          192 LILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      +||||+++++|..++.+ ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.++++|||++.....   
T Consensus        79 ~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~  158 (282)
T cd06643          79 ILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ  158 (282)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence            99999999999887754 45689999999999999999999999999999999999999999999999999864321   


Q ss_pred             ----chhheeeccCccc
Q 023430          268 ----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ----~~~~~~~~ape~~  280 (282)
                          ..++..|||||.+
T Consensus       159 ~~~~~~~~~~y~aPE~~  175 (282)
T cd06643         159 RRDSFIGTPYWMAPEVV  175 (282)
T ss_pred             ccccccccccccCHhhc
Confidence                1468899999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.96  E-value=3.7e-29  Score=212.84  Aligned_cols=165  Identities=24%  Similarity=0.336  Sum_probs=141.7

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh---hhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI---IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      +|++.+.||+|+||.||+|...      .+..+|+|.+.....   ......+.+.+|+++++.++|+||+++++++...
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN------QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc------CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence            4778899999999999999743      456799998864321   1233345688999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      +..+++|||+++++|.+++.+...+++..+..++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||++.... 
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  154 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW  154 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence            9999999999999999999887788999999999999999999999999999999999999999999999999886321 


Q ss_pred             ------------cchhheeeccCcccc
Q 023430          267 ------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ------------~~~~~~~~~ape~~~  281 (282)
                                  ...++..|+|||.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~  181 (265)
T cd06631         155 VGLHGTHSNMLKSMHGTPYWMAPEVIN  181 (265)
T ss_pred             ccccccccccccccCCCccccChhhhc
Confidence                        124678899999863

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.96  E-value=4.1e-29  Score=216.43  Aligned_cols=166  Identities=20%  Similarity=0.296  Sum_probs=136.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~  188 (282)
                      ++|++.+.||+|+||.||+|..+..+   ....+++|.++...  .....+.+.+|+.++.++ +||||+++++++...+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDG---LKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCC---CcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC
Confidence            58999999999999999999876321   22346788775321  222345678899999999 6999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC
Q 023430          189 KLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~  252 (282)
                      ..|++|||+++++|.+++....                .+++..++.++.|++.||+|||++||+||||||+|||++.++
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  156 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL  156 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC
Confidence            9999999999999999986532                477889999999999999999999999999999999999999


Q ss_pred             cEEEEecCcccccccc----hh--heeeccCccc
Q 023430          253 HVMAAHSLNSHNQLCC----FF--FFLFLGGGVF  280 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~~~----~~--~~~~~ape~~  280 (282)
                      .++|+|||++......    .+  +..|||||.+
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  190 (297)
T cd05089         157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESL  190 (297)
T ss_pred             eEEECCcCCCccccceeccCCCCcCccccCchhh
Confidence            9999999998643211    12  4569999976

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=3.6e-29  Score=213.06  Aligned_cols=165  Identities=25%  Similarity=0.375  Sum_probs=141.8

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh------hhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII------KKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      +|.+.+.||+|+||.||+|.+.     ..+..+|+|.+......      .....+.+.+|+.+++.++|+||+++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   75 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNA-----SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS   75 (267)
T ss_pred             CccccceeecCCCeEEEEEEec-----CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            3677889999999999999865     34567999988654321      122345688899999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ...+..+++|||+++++|..++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+..
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~  155 (267)
T cd06628          76 LDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKK  155 (267)
T ss_pred             EeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence            99999999999999999999998888899999999999999999999999999999999999999999999999998864


Q ss_pred             cccc-------------hhheeeccCccc
Q 023430          265 QLCC-------------FFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~~-------------~~~~~~~ape~~  280 (282)
                      ...+             .|+..|+|||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~  184 (267)
T cd06628         156 LEANSLSTKTNGARPSLQGSVFWMAPEVV  184 (267)
T ss_pred             cccccccCCccccccccCCCcCccChhHh
Confidence            3311             357889999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.96  E-value=5.9e-29  Score=214.50  Aligned_cols=168  Identities=43%  Similarity=0.728  Sum_probs=143.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-hhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-KNHVDYMKAERDILTKV-THPFIVQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~  188 (282)
                      +|++.+.||+|+||.||+++....  ...+..||+|++....... ....+.+.+|+.+++.+ +|+||+.+++++..+.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~--~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~   78 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSG--HDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT   78 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccC--CCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC
Confidence            488999999999999999986521  1356789999987643322 22345678899999999 5999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      ..++||||+++++|.+++.....+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++..... 
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  158 (290)
T cd05613          79 KLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED  158 (290)
T ss_pred             eEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence            9999999999999999998878899999999999999999999999999999999999999999999999999864322 


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..|+..|+|||.+
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~  178 (290)
T cd05613         159 EVERAYSFCGTIEYMAPDIV  178 (290)
T ss_pred             cccccccccCCcccCChhhc
Confidence                   1468899999976

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.96  E-value=5.4e-29  Score=215.64  Aligned_cols=163  Identities=21%  Similarity=0.308  Sum_probs=142.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|++.+.||+|+||.||++..+     ..+..+++|.+.....   ...+.+.+|+.+++.+.|+||+++++.+..+.
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~   90 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGD   90 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEEC-----CCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence            458999999999999999999865     3567899998876432   22355788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+||||+++++|.+++.. ..+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....  
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~  169 (296)
T cd06654          91 ELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (296)
T ss_pred             EEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence            99999999999999998854 457899999999999999999999999999999999999999999999999886422  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...+++.|+|||.+
T Consensus       170 ~~~~~~~~~~~~y~aPE~~  188 (296)
T cd06654         170 QSKRSTMVGTPYWMAPEVV  188 (296)
T ss_pred             ccccCcccCCccccCHHHH
Confidence                 23678899999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.96  E-value=8.5e-29  Score=215.40  Aligned_cols=166  Identities=19%  Similarity=0.245  Sum_probs=140.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ...|++.+.||+|+||.||++...     ..+..||+|++...........+.+.+|+.+++.++||||+++++++...+
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~   88 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDV-----RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH   88 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEc-----CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC
Confidence            346899999999999999999876     356789999986544333444566888999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..|+||||+.+ ++.+.+.. .+.+++..+..++.|++.||.|||+++|+||||+|+||+++.++.++|+|||++.....
T Consensus        89 ~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~  167 (307)
T cd06607          89 TAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP  167 (307)
T ss_pred             eEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence            99999999975 66565543 45689999999999999999999999999999999999999999999999999864322


Q ss_pred             ---chhheeeccCccc
Q 023430          268 ---CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ---~~~~~~~~ape~~  280 (282)
                         ..++..|||||.+
T Consensus       168 ~~~~~~~~~y~aPE~~  183 (307)
T cd06607         168 ANSFVGTPYWMAPEVI  183 (307)
T ss_pred             CCCccCCccccCceee
Confidence               2568899999976

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.96  E-value=2.1e-29  Score=216.61  Aligned_cols=165  Identities=24%  Similarity=0.347  Sum_probs=141.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|.++     ..++.||+|++...... ....+.+.+|+++++.++|+||+++++++..++.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   74 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHK-----ETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKR   74 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEEC-----CCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCe
Confidence            36999999999999999999976     34678999987654322 2334567789999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      .|+||||++++.|..+......+++..+..++.|++.||.|||+++|+|+||+|+||++++++.++|+|||++.....  
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07846          75 LYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  154 (286)
T ss_pred             EEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence            999999999998887776666689999999999999999999999999999999999999999999999998863211  


Q ss_pred             -----chhheeeccCccc
Q 023430          268 -----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -----~~~~~~~~ape~~  280 (282)
                           ..++..|+|||++
T Consensus       155 ~~~~~~~~~~~y~aPE~~  172 (286)
T cd07846         155 EVYTDYVATRWYRAPELL  172 (286)
T ss_pred             cccCcccceeeccCcHHh
Confidence                 1468899999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=4.1e-29  Score=216.27  Aligned_cols=170  Identities=23%  Similarity=0.344  Sum_probs=139.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCC-----------CCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVD-----------DGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI  177 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----------~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI  177 (282)
                      .++|++.+.||+|+||.||++.+....           .......+|+|++....  .....+.+.+|+.+++.++|+||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i   81 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI   81 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence            457999999999999999998754321           11234568999986542  23344568899999999999999


Q ss_pred             eeeeEEEEeCCEEEEEEeccCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCce
Q 023430          178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-----------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENI  246 (282)
Q Consensus       178 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NI  246 (282)
                      +++++++...+..+++|||+++++|..++....           .+++..+..++.|++.||.|||++||+||||||+||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni  161 (296)
T cd05095          82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC  161 (296)
T ss_pred             ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence            999999999999999999999999999887542           356778999999999999999999999999999999


Q ss_pred             EEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          247 LMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       247 Ll~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      |++.++.++|+|||++......         .++..||+||.+
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  204 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESI  204 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHH
Confidence            9999999999999998742211         225689999964

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=5.6e-29  Score=213.48  Aligned_cols=169  Identities=21%  Similarity=0.235  Sum_probs=141.1

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+|.++.++. .....+|+|.+.....  ......+.+|+.+++.++|+||+++++++.. 
T Consensus         5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~-~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-   80 (279)
T cd05057           5 KETELEKIKVLGSGAFGTVYKGVWIPEGE-KVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-   80 (279)
T ss_pred             CHHHcEEcceecCCCCccEEEEEEecCCC-CcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence            34689999999999999999999775432 2344689998765532  3344568889999999999999999999887 


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||+++...
T Consensus        81 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          81 SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence            7899999999999999998764 458999999999999999999999999999999999999999999999999986322


Q ss_pred             cc---------hhheeeccCccc
Q 023430          267 CC---------FFFFLFLGGGVF  280 (282)
Q Consensus       267 ~~---------~~~~~~~ape~~  280 (282)
                      ..         .++..|||||.+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~  183 (279)
T cd05057         161 VDEKEYHAEGGKVPIKWMALESI  183 (279)
T ss_pred             CcccceecCCCcccccccCHHHh
Confidence            11         124679999976

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=4.7e-29  Score=214.54  Aligned_cols=167  Identities=23%  Similarity=0.278  Sum_probs=139.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--C
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--S  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~  188 (282)
                      -|++++.||+|+||.||++++.... ...+..||+|.++...  .....+.+.+|+.+++.++|+||+++++++...  .
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEG-DNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN   81 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCC-CCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence            4788999999999999999865321 2456789999986543  233445688999999999999999999988765  5


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079          82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence            789999999999999998664 3589999999999999999999999999999999999999999999999999863211


Q ss_pred             ----------chhheeeccCccc
Q 023430          268 ----------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ----------~~~~~~~~ape~~  280 (282)
                                ..++..|+|||.+
T Consensus       162 ~~~~~~~~~~~~~~~~y~apE~~  184 (284)
T cd05079         162 DKEYYTVKDDLDSPVFWYAPECL  184 (284)
T ss_pred             CccceeecCCCCCCccccCHHHh
Confidence                      1335679999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=3.4e-29  Score=212.02  Aligned_cols=161  Identities=16%  Similarity=0.176  Sum_probs=133.7

Q ss_pred             eeeCcCCCeEEEEEEEcCCCC-----CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDD-----GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +.||+|+||.||++.+.....     ......+++|.+.....   . ...+.+|+.+++.++|+||+++++++.. ...
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---D-SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---h-HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence            368999999999999875431     11223577787654321   1 4567889999999999999999999887 778


Q ss_pred             EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-------cEEEEecCcc
Q 023430          191 YLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-------HVMAAHSLNS  262 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-------~v~l~Dfg~s  262 (282)
                      ++||||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.++       .++|+|||++
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999999998765 689999999999999999999999999999999999999888       7999999998


Q ss_pred             ccccc---chhheeeccCcccc
Q 023430          263 HNQLC---CFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~~---~~~~~~~~ape~~~  281 (282)
                      .....   ..+...|+|||.+.
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~  177 (259)
T cd05037         156 ITVLSREERVERIPWIAPECIR  177 (259)
T ss_pred             cccccccccccCCCccChhhhc
Confidence            75332   24578899999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.96  E-value=1.5e-29  Score=217.46  Aligned_cols=163  Identities=21%  Similarity=0.364  Sum_probs=138.3

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||+|+++     ..+..+|+|.+..... .......+.+|+.+++.++|+||+++++++.+....
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~-----~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   74 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKL   74 (284)
T ss_pred             CceeEEEecccCCeEEEEEEEC-----CCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCce
Confidence            4889999999999999999977     3567899999875432 222234567799999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          191 YLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      |+++||+.+ +|..++.. .+.+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||++....   
T Consensus        75 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  153 (284)
T cd07839          75 TLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV  153 (284)
T ss_pred             EEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence            999999975 67776654 4668999999999999999999999999999999999999999999999999886321   


Q ss_pred             ----cchhheeeccCccc
Q 023430          267 ----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ----~~~~~~~~~ape~~  280 (282)
                          ...++..|+|||.+
T Consensus       154 ~~~~~~~~~~~y~aPE~~  171 (284)
T cd07839         154 RCYSAEVVTLWYRPPDVL  171 (284)
T ss_pred             CCcCCCccccCCcChHHH
Confidence                12457899999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.96  E-value=6e-29  Score=214.45  Aligned_cols=164  Identities=19%  Similarity=0.311  Sum_probs=139.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||++..+     ..+..||+|.+......  .....+.+|+.+++.++|+||+++++++...+
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   76 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSK-----LTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKK   76 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEc-----CCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCC
Confidence            468999999999999999999876     35678999998754321  12234567999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..++||||+.+ +|..++.+. ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.++|+|||++.....
T Consensus        77 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  155 (291)
T cd07844          77 TLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSV  155 (291)
T ss_pred             eEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence            99999999985 898888654 4578999999999999999999999999999999999999999999999999864211


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..++..|+|||.+
T Consensus       156 ~~~~~~~~~~~~~~~aPE~~  175 (291)
T cd07844         156 PSKTYSNEVVTLWYRPPDVL  175 (291)
T ss_pred             CCccccccccccccCCcHHh
Confidence                   1357889999976

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.96  E-value=6.2e-29  Score=210.92  Aligned_cols=159  Identities=21%  Similarity=0.235  Sum_probs=132.1

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEec
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDF  196 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  196 (282)
                      .||+|+||.||+|.++..   ..+..||+|++....  .....+.+.+|+.+++.++|+||+++++++. ....++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~---~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMR---KKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecC---CCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEe
Confidence            389999999999987632   234569999886542  2334456889999999999999999999875 4578999999


Q ss_pred             cCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-------
Q 023430          197 INGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-------  268 (282)
Q Consensus       197 ~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-------  268 (282)
                      +++++|.+++.. ...+++..++.++.|++.||.|||++|++||||||+|||++.++.++|+|||++.....+       
T Consensus        76 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  155 (257)
T cd05115          76 ASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR  155 (257)
T ss_pred             CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence            999999998875 456899999999999999999999999999999999999999999999999998632221       


Q ss_pred             ---hhheeeccCcccc
Q 023430          269 ---FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ---~~~~~~~ape~~~  281 (282)
                         .++..|||||.++
T Consensus       156 ~~~~~~~~y~aPE~~~  171 (257)
T cd05115         156 SAGKWPLKWYAPECIN  171 (257)
T ss_pred             CCCCCCcccCCHHHHc
Confidence               2246899999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.96  E-value=1.2e-28  Score=208.48  Aligned_cols=164  Identities=24%  Similarity=0.425  Sum_probs=139.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe-CCE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT-RSK  189 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~  189 (282)
                      +|++.+.||+|+||.||++.++     ..++.+|+|.+..... .....+.+.+|+.+++.++|+||+++++.+.. ...
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHR-----TDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGL   74 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEc-----CCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCE
Confidence            4899999999999999999976     3456799999865432 22334567889999999999999999988764 446


Q ss_pred             EEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      +|++|||+++++|.+++...  ..+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.... 
T Consensus        75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence            89999999999999888753  458999999999999999999999999999999999999999999999999986322 


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...+++.|||||.+
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~  174 (257)
T cd08223         155 QCDMASTLIGTPYYMSPELF  174 (257)
T ss_pred             cCCccccccCCcCccChhHh
Confidence                  12568899999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.2e-30  Score=231.21  Aligned_cols=157  Identities=24%  Similarity=0.400  Sum_probs=136.8

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEec
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDF  196 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  196 (282)
                      +||+|+||+||.|+++     .+....|||.+....   ....+-+..||.+-+.|+|.|||+++|++..++.+-|.||-
T Consensus       582 VLGKGTYG~VYA~RD~-----~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEq  653 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDM-----DTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQ  653 (1226)
T ss_pred             EeecCceeEEEeeccc-----cceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeec
Confidence            7999999999999976     456678999986543   34456688999999999999999999999999999999999


Q ss_pred             cCCCchHHHHHh-cCCC--CHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCccccc----ccc
Q 023430          197 INGGHLFFHLYR-QGIF--REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNSHNQ----LCC  268 (282)
Q Consensus       197 ~~~g~L~~~l~~-~~~~--~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~~~----~~~  268 (282)
                      ++||+|..++.. .+++  .+..+-++.+||++||.|||++.|||||||-+|+|++. .|-+||+|||.|+..    =|.
T Consensus       654 VPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T  733 (1226)
T KOG4279|consen  654 VPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT  733 (1226)
T ss_pred             CCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccc
Confidence            999999998865 4666  78889999999999999999999999999999999974 689999999988632    222


Q ss_pred             ---hhheeeccCcccc
Q 023430          269 ---FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ---~~~~~~~ape~~~  281 (282)
                         .||.-|||||+++
T Consensus       734 ETFTGTLQYMAPEvID  749 (1226)
T KOG4279|consen  734 ETFTGTLQYMAPEVID  749 (1226)
T ss_pred             cccccchhhhChHhhc
Confidence               7799999999986

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.96  E-value=5.1e-29  Score=211.21  Aligned_cols=160  Identities=19%  Similarity=0.234  Sum_probs=134.4

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEec
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDF  196 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  196 (282)
                      .||+|+||.||+|.++..   ..+..+|+|++.... ......+.+.+|+.+++.++|+||+++++++. ....++||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~---~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~   76 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMK---KSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMEL   76 (257)
T ss_pred             cCCCcCCcceEEeEEecC---CCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEec
Confidence            589999999999976533   345679999986543 22334566888999999999999999999875 4567999999


Q ss_pred             cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc--------
Q 023430          197 INGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC--------  268 (282)
Q Consensus       197 ~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~--------  268 (282)
                      +++++|..++.....+++..+..++.|++.||.|||++||+||||||.|||++.++.++|+|||++......        
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  156 (257)
T cd05116          77 AELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT  156 (257)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence            999999999987778999999999999999999999999999999999999999999999999998642211        


Q ss_pred             --hhheeeccCcccc
Q 023430          269 --FFFFLFLGGGVFN  281 (282)
Q Consensus       269 --~~~~~~~ape~~~  281 (282)
                        .++..|||||.++
T Consensus       157 ~~~~~~~y~aPE~~~  171 (257)
T cd05116         157 HGKWPVKWYAPECMN  171 (257)
T ss_pred             CCCCCccccCHhHhc
Confidence              2246899999764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.96  E-value=5.7e-29  Score=212.37  Aligned_cols=159  Identities=19%  Similarity=0.187  Sum_probs=130.6

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEec
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDF  196 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~  196 (282)
                      .||+|+||.||+++....   .....+++|.+.....  ....+.+.+|+.+++.++||||+++++.+......|+||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~---~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~   76 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTD---TGVARVVVKELKANAS--SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEY   76 (268)
T ss_pred             cCCCCcCceEEEEEEEcC---CCcceEEEEEecCCCC--hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEec
Confidence            589999999999975422   2344567777654321  22345688899999999999999999999999999999999


Q ss_pred             cCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc----
Q 023430          197 INGGHLFFHLYRQ----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC----  268 (282)
Q Consensus       197 ~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~----  268 (282)
                      +++|+|..++.+.    ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++......    
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~  156 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE  156 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence            9999999988753    23566778899999999999999999999999999999999999999999998642211    


Q ss_pred             -----hhheeeccCccc
Q 023430          269 -----FFFFLFLGGGVF  280 (282)
Q Consensus       269 -----~~~~~~~ape~~  280 (282)
                           .++..|+|||++
T Consensus       157 ~~~~~~~~~~y~aPE~~  173 (268)
T cd05086         157 TEDDKCVPLRWLAPELV  173 (268)
T ss_pred             cccCCcCcccccCchhc
Confidence                 346789999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.96  E-value=5.1e-29  Score=211.00  Aligned_cols=163  Identities=20%  Similarity=0.343  Sum_probs=137.4

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE-
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ-  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-  185 (282)
                      +...+|++.+.||+|+||.||++...       +..+++|.+....     ..+.+.+|+.+++.++|+||+++++++. 
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   70 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDYR-------GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVE   70 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEEc-------CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEc
Confidence            44568999999999999999999754       4568999875432     2345788999999999999999998754 


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ..+..+++|||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.++.++++|||++.
T Consensus        71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~  150 (256)
T cd05082          71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTK  150 (256)
T ss_pred             CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccce
Confidence            4567999999999999999987643  37889999999999999999999999999999999999999999999999987


Q ss_pred             ccccc----hhheeeccCcccc
Q 023430          264 NQLCC----FFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~~----~~~~~~~ape~~~  281 (282)
                      .....    .++..|||||++.
T Consensus       151 ~~~~~~~~~~~~~~y~aPE~~~  172 (256)
T cd05082         151 EASSTQDTGKLPVKWTAPEALR  172 (256)
T ss_pred             eccccCCCCccceeecCHHHHc
Confidence            43222    3366899999763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.96  E-value=9e-29  Score=210.01  Aligned_cols=165  Identities=25%  Similarity=0.385  Sum_probs=145.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||++...     ..+..|++|.+...... ....+.+.+|+.+++.++|+||+++++.+...+..
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~   74 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNL-----DTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKV   74 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEEC-----CCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEE
Confidence            4889999999999999999865     35678999998765432 34567789999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      ++|+||+++++|.+++.....+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....   
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          75 YIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             EEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence            99999999999999998777789999999999999999999999999999999999999999999999998864321   


Q ss_pred             --------chhheeeccCcccc
Q 023430          268 --------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 --------~~~~~~~~ape~~~  281 (282)
                              ..++..|++||.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~  176 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVIT  176 (264)
T ss_pred             cccccccCCcCCcCccChhhcc
Confidence                    24578999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.96  E-value=6.2e-29  Score=213.04  Aligned_cols=170  Identities=20%  Similarity=0.306  Sum_probs=140.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.+.||+|+||.||+|.+...........|++|.+....  .......+.+|+.+++.++|+||+++++++....
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL   82 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence            45799999999999999999998743222356678999876432  1222345778999999999999999999999888


Q ss_pred             EEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC---cEEEEe
Q 023430          189 KLYLILDFINGGHLFFHLYRQG-------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG---HVMAAH  258 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~---~v~l~D  258 (282)
                      ..++||||+++++|.+++....       .+++..++.++.||+.||.|||+++++||||||+|||++.++   .++|+|
T Consensus        83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d  162 (277)
T cd05036          83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD  162 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence            9999999999999999987643       478899999999999999999999999999999999998765   589999


Q ss_pred             cCcccccccc---------hhheeeccCccc
Q 023430          259 SLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      ||+++.....         .....|||||++
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  193 (277)
T cd05036         163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAF  193 (277)
T ss_pred             CccccccCCccceecCCCCCccHhhCCHHHH
Confidence            9998743211         224579999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=4.7e-29  Score=219.17  Aligned_cols=158  Identities=20%  Similarity=0.142  Sum_probs=122.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh--hhhhHHHHHHHHHHHHHhcCCCCeee-eeEEEE
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI--IKKNHVDYMKAERDILTKVTHPFIVQ-LRYSFQ  185 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~  185 (282)
                      .++|.+.++||+|+||+||+|.++..    .+..+|||++.....  ......+.+.+|+++|+.++|+||+. +++.  
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--   90 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGD----PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--   90 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCC----CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence            46799999999999999999987631    345589998753311  12234566899999999999999985 4432  


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecc-CCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDL-KPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDl-Kp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                        +..|+||||++|++|.. +.   ...   ...++.|++.+|.|||++||+|||| ||+|||++.++.++|+|||+|+.
T Consensus        91 --~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~  161 (365)
T PRK09188         91 --GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV  161 (365)
T ss_pred             --CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence              45899999999999963 21   111   1467889999999999999999999 99999999999999999999961


Q ss_pred             c--------------ccc-hhheeeccCcccc
Q 023430          265 Q--------------LCC-FFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~--------------~~~-~~~~~~~ape~~~  281 (282)
                      .              ++. .+++.|+|||.++
T Consensus       162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             cccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            1              111 4577899999864

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.96  E-value=6.1e-29  Score=212.08  Aligned_cols=166  Identities=19%  Similarity=0.235  Sum_probs=136.4

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE--
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK--  189 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--  189 (282)
                      |++.+.||+|+||.||+|.....  ......||+|++..... .....+.+.+|+.+++.++|+||+++++.+.....  
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~--~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   77 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQD--DGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQ   77 (273)
T ss_pred             CccccccCcCCCceEEEEEEecC--CCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccc
Confidence            56788999999999999987632  12456799999875432 23345568889999999999999999998765443  


Q ss_pred             ----EEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          190 ----LYLILDFINGGHLFFHLYRQ------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       190 ----~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                          .+++|||+++++|..++...      ..+++..+..++.|++.||.|||+++|+||||||+||++++++.+||+||
T Consensus        78 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          78 KIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             cCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCc
Confidence                79999999999998887542      35789999999999999999999999999999999999999999999999


Q ss_pred             Ccccccccc---------hhheeeccCccc
Q 023430          260 LNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      |+++.....         ..+..|+|||.+
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  187 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESL  187 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhc
Confidence            998743211         235689999976

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=2.6e-29  Score=216.14  Aligned_cols=165  Identities=22%  Similarity=0.295  Sum_probs=144.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||++.+.     ..+..||+|++....  .....+.+.+|+++++.++|+||+++++.+...+
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~-----~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   76 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHI-----PTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN   76 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEc-----CCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC
Confidence            457889999999999999999876     356789999886542  2334466889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      .+++||||+++++|..++.+.+.+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++.....
T Consensus        77 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~  156 (284)
T cd06620          77 NICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN  156 (284)
T ss_pred             EEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence            999999999999999998887789999999999999999999996 6899999999999999999999999999864221


Q ss_pred             -----chhheeeccCccc
Q 023430          268 -----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -----~~~~~~~~ape~~  280 (282)
                           -.++..|+|||.+
T Consensus       157 ~~~~~~~~~~~~~aPE~~  174 (284)
T cd06620         157 SIADTFVGTSTYMSPERI  174 (284)
T ss_pred             hccCccccCcccCCHHHH
Confidence                 2568999999976

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.96  E-value=7.4e-29  Score=213.27  Aligned_cols=165  Identities=25%  Similarity=0.380  Sum_probs=137.5

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEE-
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQ-  185 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~-  185 (282)
                      ..++|++.+.||+|+||.||++...     ..+..+|+|++....    .....+.+|+.+++.+ +|+||+++++++. 
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNK-----KNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEEC-----CCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            3568999999999999999999876     346679999875432    1124477899999999 6999999999874 


Q ss_pred             ----eCCEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEE
Q 023430          186 ----TRSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       186 ----~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~  257 (282)
                          .++..++||||+++++|..++..    ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~  166 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV  166 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence                34579999999999999887753    2458889999999999999999999999999999999999999999999


Q ss_pred             ecCcccccc-------cchhheeeccCcccc
Q 023430          258 HSLNSHNQL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       258 Dfg~s~~~~-------~~~~~~~~~ape~~~  281 (282)
                      |||++....       ...|+..|+|||++.
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (286)
T cd06638         167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIA  197 (286)
T ss_pred             cCCceeecccCCCccccccCCCcccChhhhc
Confidence            999986321       125788999999873

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=9.1e-29  Score=211.20  Aligned_cols=165  Identities=26%  Similarity=0.394  Sum_probs=141.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh-------hhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII-------KKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      +|.+.+.||+|+||.||+|...     ..+..+|+|.+......       .....+.+.+|+.+++.++|+||++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   76 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNV-----TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF   76 (272)
T ss_pred             ceeecceecccCceEEEEEeec-----CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence            5788899999999999999865     34668999987642211       11123567889999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +...+..++||||+++++|.+++.+.+.+++..+..++.|++.||.|||+++++||||||+||+++.++.++++|||++.
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~  156 (272)
T cd06629          77 ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISK  156 (272)
T ss_pred             eccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence            99999999999999999999999887889999999999999999999999999999999999999999999999999986


Q ss_pred             cccc---------chhheeeccCccc
Q 023430          264 NQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~~---------~~~~~~~~ape~~  280 (282)
                      ....         -.++..|+|||.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE~~  182 (272)
T cd06629         157 KSDDIYDNDQNMSMQGSVFWMAPEVI  182 (272)
T ss_pred             cccccccccccccccCCccccCHHHh
Confidence            4221         1457889999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=1e-28  Score=210.46  Aligned_cols=170  Identities=21%  Similarity=0.215  Sum_probs=142.1

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|+..+.||+|+||.||+|..+..+  .....+++|.+....  .....+.+..|+.+++.++|+||+++.+++...
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~--~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   78 (268)
T cd05063           3 HPSHITKQKVIGAGEFGEVFRGILKMPG--RKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF   78 (268)
T ss_pred             ChHHceEeeEecCCCCccEEEEEEecCC--CCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC
Confidence            4568999999999999999999876422  234579999886542  223345688899999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      +..++||||+++++|..++... +.+++..+..++.|++.||.|||++|++||||||+||+++.++.++++|||++....
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence            9999999999999999988764 568999999999999999999999999999999999999999999999999986332


Q ss_pred             cc----------hhheeeccCcccc
Q 023430          267 CC----------FFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~~----------~~~~~~~ape~~~  281 (282)
                      ..          .....|+|||.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~  183 (268)
T cd05063         159 DDPEGTYTTSGGKIPIRWTAPEAIA  183 (268)
T ss_pred             cccccceeccCCCcCceecCHHHhh
Confidence            11          1134699999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=7.4e-29  Score=211.07  Aligned_cols=162  Identities=17%  Similarity=0.209  Sum_probs=132.4

Q ss_pred             eeeCcCCCeEEEEEEEcCCCC-------CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          116 RVVGQGAFGKVFQVKKKGVDD-------GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      +.||+|+||.||+|++....+       ......+++|.+....   ......+.+|+.+++.++||||+++++++....
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            368999999999998642211       1123357888875532   233446778999999999999999999999988


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc-------EEEEecC
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH-------VMAAHSL  260 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~-------v~l~Dfg  260 (282)
                      ..+++|||+++++|..++..+ ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.       ++++|||
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            999999999999998888654 56899999999999999999999999999999999999987664       8999999


Q ss_pred             ccccccc---chhheeeccCccc
Q 023430          261 NSHNQLC---CFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~---~~~~~~~~ape~~  280 (282)
                      ++.....   ..++..|||||.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~  180 (262)
T cd05077         158 IPITVLSRQECVERIPWIAPECV  180 (262)
T ss_pred             CCccccCcccccccccccChhhh
Confidence            9864332   2568889999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.96  E-value=8.8e-29  Score=214.44  Aligned_cols=162  Identities=22%  Similarity=0.310  Sum_probs=141.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      .+|++.+.||+|+||.||++...     ..+..||+|.+.....   ...+.+.+|+.+++.++|+||+++++.+...+.
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~   90 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDI-----ATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDE   90 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEEC-----CCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCE
Confidence            57999999999999999999865     3567899999865432   223557889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      .|+||||+++++|.+++.+ ..+++.++..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++....   
T Consensus        91 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~  169 (297)
T cd06656          91 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  169 (297)
T ss_pred             EEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence            9999999999999998864 457899999999999999999999999999999999999999999999999886321   


Q ss_pred             ----cchhheeeccCccc
Q 023430          267 ----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ----~~~~~~~~~ape~~  280 (282)
                          ...+++.|+|||.+
T Consensus       170 ~~~~~~~~~~~y~aPE~~  187 (297)
T cd06656         170 SKRSTMVGTPYWMAPEVV  187 (297)
T ss_pred             cCcCcccCCccccCHHHH
Confidence                12568899999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.96  E-value=7.3e-29  Score=212.62  Aligned_cols=158  Identities=35%  Similarity=0.578  Sum_probs=136.6

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEecc
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFI  197 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  197 (282)
                      ||+|+||.||+|..+     ..++.||+|++...........+.+.+|+++++.++||||+++++.+...+..|+||||+
T Consensus         1 lg~g~~g~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVK-----ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEc-----CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC
Confidence            699999999999876     356789999987654333334455678999999999999999999999999999999999


Q ss_pred             CCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc------cch
Q 023430          198 NGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL------CCF  269 (282)
Q Consensus       198 ~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~------~~~  269 (282)
                      ++++|.+++.+.+  .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++....      ...
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  155 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA  155 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence            9999999987755  68999999999999999999999999999999999999999999999999885321      225


Q ss_pred             hheeeccCccc
Q 023430          270 FFFLFLGGGVF  280 (282)
Q Consensus       270 ~~~~~~ape~~  280 (282)
                      ++..|++||.+
T Consensus       156 ~~~~y~~PE~~  166 (277)
T cd05577         156 GTPGYMAPEVL  166 (277)
T ss_pred             CCCCcCCHHHh
Confidence            57889999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.96  E-value=7.9e-29  Score=212.69  Aligned_cols=159  Identities=37%  Similarity=0.642  Sum_probs=131.8

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHH---HHHHhcCCCCeeeeeEEEEeCCEEEEE
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER---DILTKVTHPFIVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~nIv~l~~~~~~~~~~~lv  193 (282)
                      .||+|+||.||++.+.     ..++.||+|++.+...........+..|.   .+++...|+||+++++.+...+..++|
T Consensus         1 ~ig~g~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   75 (278)
T cd05606           1 IIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   75 (278)
T ss_pred             CcccCCCeEEEEEEEe-----cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE
Confidence            4899999999999876     35678999998765432222222233343   344556799999999999999999999


Q ss_pred             EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc-----ccc
Q 023430          194 LDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ-----LCC  268 (282)
Q Consensus       194 ~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~-----~~~  268 (282)
                      |||+.|++|..++...+.+++..++.++.|++.||.|||+++|+||||||+|||++.++.++|+|||++...     ...
T Consensus        76 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~  155 (278)
T cd05606          76 LDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS  155 (278)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence            999999999999988888999999999999999999999999999999999999999999999999988532     123


Q ss_pred             hhheeeccCccc
Q 023430          269 FFFFLFLGGGVF  280 (282)
Q Consensus       269 ~~~~~~~ape~~  280 (282)
                      .|+..|||||.+
T Consensus       156 ~~~~~y~aPE~~  167 (278)
T cd05606         156 VGTHGYMAPEVL  167 (278)
T ss_pred             CCCcCCcCcHHh
Confidence            679999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.96  E-value=7.2e-29  Score=211.03  Aligned_cols=163  Identities=22%  Similarity=0.285  Sum_probs=136.0

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.++||+|+||.||+|++..      ...||+|++.....    ..+.+.+|+++++.++|+||+++++.+. 
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~------~~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-   71 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNG------TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-   71 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecC------CceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-
Confidence            445689999999999999999998652      23589999875332    2245788999999999999999998874 


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ....++||||+++++|.+++.+.  ..+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||.+..
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~  151 (262)
T cd05071          72 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  151 (262)
T ss_pred             CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceee
Confidence            45689999999999999998753  3478899999999999999999999999999999999999999999999999853


Q ss_pred             cc--------cchhheeeccCccc
Q 023430          265 QL--------CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~--------~~~~~~~~~ape~~  280 (282)
                      ..        ...++..||+||..
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~PE~~  175 (262)
T cd05071         152 IEDNEYTARQGAKFPIKWTAPEAA  175 (262)
T ss_pred             ccccccccccCCcccceecCHhHh
Confidence            21        11335679999975

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.96  E-value=8.7e-29  Score=209.25  Aligned_cols=166  Identities=28%  Similarity=0.401  Sum_probs=143.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh--hhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI--IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      +|+..+.||+|+||.||+|...     ..+..|++|.+.....  ..+...+.+.+|+.+++.++|+||+++++++....
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   75 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNL-----DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED   75 (258)
T ss_pred             CccccceeeecCCceEEEEEEc-----CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC
Confidence            3677789999999999999875     3567799998865331  12334567889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .++++|||+++++|.+++.+...+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....  
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~  155 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF  155 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence            999999999999999999887778999999999999999999999999999999999999999999999999886422  


Q ss_pred             ----cchhheeeccCcccc
Q 023430          267 ----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ----~~~~~~~~~ape~~~  281 (282)
                          ...++..|++||.+.
T Consensus       156 ~~~~~~~~~~~y~~pe~~~  174 (258)
T cd06632         156 SFAKSFKGSPYWMAPEVIA  174 (258)
T ss_pred             ccccccCCCcceeCHHHhc
Confidence                235688899999763

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.96  E-value=1e-28  Score=209.82  Aligned_cols=158  Identities=34%  Similarity=0.570  Sum_probs=140.2

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEecc
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFI  197 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  197 (282)
                      ||.|+||.||+++..     ..+..+++|++.+.........+.+.+|+.+++.++|+||+++++.+..+...+++|||+
T Consensus         1 lg~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVK-----SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEEC-----CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC
Confidence            699999999999976     356789999998765444455567889999999999999999999999999999999999


Q ss_pred             CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc------chhh
Q 023430          198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC------CFFF  271 (282)
Q Consensus       198 ~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~------~~~~  271 (282)
                      ++++|.+++.+...+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++.....      ..++
T Consensus        76 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~  155 (262)
T cd05572          76 LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGT  155 (262)
T ss_pred             CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCC
Confidence            9999999998877889999999999999999999999999999999999999999999999999864322      2468


Q ss_pred             eeeccCccc
Q 023430          272 FLFLGGGVF  280 (282)
Q Consensus       272 ~~~~ape~~  280 (282)
                      ..||+||.+
T Consensus       156 ~~~~~PE~~  164 (262)
T cd05572         156 PEYVAPEII  164 (262)
T ss_pred             cCccChhHh
Confidence            899999986

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.96  E-value=6.9e-29  Score=209.91  Aligned_cols=162  Identities=24%  Similarity=0.345  Sum_probs=139.8

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      +.||+|+||.||+|......  ..+..+++|++.......  ..+.+.+|+.+++.++|+||+++++++......+++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   76 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKD--GKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLE   76 (262)
T ss_pred             CccccCCceEEEEEEEecCC--CCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEE
Confidence            46899999999999976321  236779999987654322  45678899999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          196 FINGGHLFFHLYRQ---------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       196 ~~~~g~L~~~l~~~---------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      |+++++|.+++...         ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||.+....
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  156 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY  156 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence            99999999999875         678999999999999999999999999999999999999999999999999996433


Q ss_pred             c---------chhheeeccCcccc
Q 023430          267 C---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~---------~~~~~~~~ape~~~  281 (282)
                      .         ..++..|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~  180 (262)
T cd00192         157 DDDYYRKKTGGKLPIRWMAPESLK  180 (262)
T ss_pred             cccccccccCCCcCccccCHHHhc
Confidence            2         24578999999763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.96  E-value=9.8e-29  Score=212.50  Aligned_cols=165  Identities=24%  Similarity=0.414  Sum_probs=141.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|.++     ..+..|++|+++.... .....+.+.+|+++++.++|+||+++++.+...+.
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~-----~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   74 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNK-----ATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGR   74 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeC-----CCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCE
Confidence            37999999999999999999876     3467899998865432 23344668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      .+++|||++++.+..+..+...+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....  
T Consensus        75 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          75 LYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence            999999999877776666666789999999999999999999999999999999999999999999999998863222  


Q ss_pred             ------chhheeeccCccc
Q 023430          268 ------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ------~~~~~~~~ape~~  280 (282)
                            ..++..|||||++
T Consensus       155 ~~~~~~~~~~~~~~~PE~~  173 (288)
T cd07833         155 ASPLTDYVATRWYRAPELL  173 (288)
T ss_pred             cccccCcccccCCcCCchh
Confidence                  1447889999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.96  E-value=1.4e-28  Score=211.34  Aligned_cols=163  Identities=24%  Similarity=0.358  Sum_probs=141.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||+|.+.     ..+..|++|++...... ....+.+.+|+.+++.++|+||+++++++......
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   74 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDR-----ETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGF   74 (286)
T ss_pred             CceEEeecccCCCcEEEEEEEC-----CCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCee
Confidence            5899999999999999999976     34678999998765422 23345688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          191 YLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      ++||||+ +++|..++.. ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....   
T Consensus        75 ~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~  153 (286)
T cd07832          75 VLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE  153 (286)
T ss_pred             EEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence            9999999 9999998865 3568999999999999999999999999999999999999999999999999886422   


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~y~aPE~~  172 (286)
T cd07832         154 PRLYSHQVATRWYRAPELL  172 (286)
T ss_pred             CCccccccCcccccCceee
Confidence                 23568899999986

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-29  Score=225.81  Aligned_cols=168  Identities=21%  Similarity=0.284  Sum_probs=143.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      ...+.+.||+|-||.||+|.+..... ...-.||||..+.+..  .+..+.|..|..+|+.++|||||+++|.+... ..
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~k-ge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~  465 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEK-GERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PM  465 (974)
T ss_pred             hccHHHhhcCCcccceeeeEeccccc-CcceeeeeehhccCCC--hhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ce
Confidence            34455789999999999999876532 2334589998877653  33467788999999999999999999998764 59


Q ss_pred             EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccch
Q 023430          191 YLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCF  269 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~~  269 (282)
                      |||||+++-|.|..++... ..++......++.||+.||.|||+.++|||||..+|||+....-||++|||+|+....+.
T Consensus       466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~  545 (974)
T KOG4257|consen  466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA  545 (974)
T ss_pred             eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence            9999999999999999765 458888889999999999999999999999999999999999999999999998655553


Q ss_pred             h--------heeeccCccccC
Q 023430          270 F--------FFLFLGGGVFNF  282 (282)
Q Consensus       270 ~--------~~~~~ape~~~~  282 (282)
                      +        -..|||||-+||
T Consensus       546 yYkaS~~kLPIKWmaPESINf  566 (974)
T KOG4257|consen  546 YYKASRGKLPIKWMAPESINF  566 (974)
T ss_pred             hhhccccccceeecCccccch
Confidence            2        568999999998

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.96  E-value=7.7e-29  Score=210.39  Aligned_cols=165  Identities=18%  Similarity=0.288  Sum_probs=138.7

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.++||+|+||.||+|..+      .+..||+|.+.....    ..+.+.+|+.+++.++|+||+++++.+.
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~------~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~   71 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYN------GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT   71 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecC------CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc
Confidence            455678999999999999999999854      345699998875432    2345788999999999999999998864


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                       .+..+++|||+.+++|.+++...  ..+++.++..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++.
T Consensus        72 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  150 (260)
T cd05067          72 -QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLAR  150 (260)
T ss_pred             -cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCccee
Confidence             45789999999999999988653  357889999999999999999999999999999999999999999999999986


Q ss_pred             cccc--------chhheeeccCcccc
Q 023430          264 NQLC--------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~--------~~~~~~~~ape~~~  281 (282)
                      ....        ..++..|+|||.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~pe~~~  176 (260)
T cd05067         151 LIEDNEYTAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             ecCCCCcccccCCcccccccCHHHhc
Confidence            4321        13356899999864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.2e-28  Score=209.07  Aligned_cols=165  Identities=21%  Similarity=0.246  Sum_probs=140.9

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.++||+|+||.||++...      ....+|+|.+.....    ..+.+.+|+.+++.++|+||+++++++.
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~------~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWN------GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCS   71 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEc------CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeee
Confidence            356678999999999999999999865      235689998875432    2345788999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .....+++|||+++++|.+++...  ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++++|||++.
T Consensus        72 ~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~  151 (261)
T cd05034          72 EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLAR  151 (261)
T ss_pred             cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccce
Confidence            888999999999999999998764  358899999999999999999999999999999999999999999999999986


Q ss_pred             ccccc--------hhheeeccCccc
Q 023430          264 NQLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~~~--------~~~~~~~ape~~  280 (282)
                      ....+        ..+..|+|||.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~~PE~~  176 (261)
T cd05034         152 LIEDDEYTAREGAKFPIKWTAPEAA  176 (261)
T ss_pred             eccchhhhhhhccCCCccccCHHHh
Confidence            43211        224679999976

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.96  E-value=7.4e-29  Score=214.20  Aligned_cols=164  Identities=21%  Similarity=0.364  Sum_probs=139.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--  187 (282)
                      ++|++.+.||+|+||.||+|.++     ..+..+++|.++..... ......+.+|+.+++.++||||+++++++...  
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~   78 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDK-----KTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNL   78 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEEC-----CCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC
Confidence            57899999999999999999976     34667999998755432 22233466799999999999999999998877  


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      +..|+||||+.+ +|..++.... .+++..++.++.|++.||.|||+++|+|+||||+|||++.++.++|+|||++....
T Consensus        79 ~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~  157 (293)
T cd07843          79 DKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYG  157 (293)
T ss_pred             CcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence            899999999975 8888876643 48999999999999999999999999999999999999999999999999886322


Q ss_pred             c-------chhheeeccCccc
Q 023430          267 C-------CFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~-------~~~~~~~~ape~~  280 (282)
                      .       ..+++.|||||.+
T Consensus       158 ~~~~~~~~~~~~~~~~aPE~~  178 (293)
T cd07843         158 SPLKPYTQLVVTLWYRAPELL  178 (293)
T ss_pred             CCccccccccccccccCchhh
Confidence            1       2568889999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.96  E-value=6e-29  Score=210.77  Aligned_cols=158  Identities=44%  Similarity=0.707  Sum_probs=139.9

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEecc
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFI  197 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  197 (282)
                      ||+|+||.||++++.     ..+..+++|++...........+.+.+|+++++.++|+||+++++.+......|++|||+
T Consensus         1 lg~g~~~~vy~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKK-----STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEEC-----CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC
Confidence            689999999999976     346789999997665444455677889999999999999999999999999999999999


Q ss_pred             CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc---------
Q 023430          198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC---------  268 (282)
Q Consensus       198 ~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~---------  268 (282)
                      ++++|..++.+.+.+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++......         
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  155 (265)
T cd05579          76 PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE  155 (265)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence            99999999988778999999999999999999999999999999999999999999999999988643322         


Q ss_pred             ------hhheeeccCccc
Q 023430          269 ------FFFFLFLGGGVF  280 (282)
Q Consensus       269 ------~~~~~~~ape~~  280 (282)
                            .++..|++||.+
T Consensus       156 ~~~~~~~~~~~~~~Pe~~  173 (265)
T cd05579         156 KEDKRIVGTPDYIAPEVI  173 (265)
T ss_pred             ccccCcccCccccCHHHh
Confidence                  457889999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.96  E-value=1.9e-28  Score=208.24  Aligned_cols=164  Identities=25%  Similarity=0.365  Sum_probs=142.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||.|+||.||++.+.     ..+..+++|++.......  ..+.+.+|+.+++.++|+||+++++.+.....
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   73 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICL-----PNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDE   73 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEc-----CCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCE
Confidence            47999999999999999999876     345679999986543222  45668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQ---GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .|++||++++++|.+++...   ..+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++....
T Consensus        74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~  153 (267)
T cd06610          74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLA  153 (267)
T ss_pred             EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence            99999999999999998764   458999999999999999999999999999999999999999999999999885322


Q ss_pred             c-----------chhheeeccCccc
Q 023430          267 C-----------CFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~-----------~~~~~~~~ape~~  280 (282)
                      .           ..++..|++||.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~~Pe~~  178 (267)
T cd06610         154 DGGDRTRKVRKTFVGTPCWMAPEVM  178 (267)
T ss_pred             cCccccccccccccCChhhcChHHH
Confidence            2           1467889999976

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.96  E-value=4e-28  Score=210.24  Aligned_cols=163  Identities=21%  Similarity=0.326  Sum_probs=141.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|++.+.||.|+||.||++...     ..+..|++|.+....   ....+.+.+|+.+++.++|+||+++++.+....
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   89 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDV-----ATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGD   89 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEc-----CCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCc
Confidence            356999999999999999999865     456789999886543   223456788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+|+||+++++|..++.. ..+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++....  
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~  168 (296)
T cd06655          90 ELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE  168 (296)
T ss_pred             eEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence            99999999999999988864 458999999999999999999999999999999999999999999999999886321  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...++..|||||.+
T Consensus       169 ~~~~~~~~~~~~y~aPE~~  187 (296)
T cd06655         169 QSKRSTMVGTPYWMAPEVV  187 (296)
T ss_pred             cccCCCcCCCccccCcchh
Confidence                 12568899999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-29  Score=230.29  Aligned_cols=179  Identities=22%  Similarity=0.252  Sum_probs=155.2

Q ss_pred             HHhhhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeee
Q 023430          100 EAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQ  179 (282)
Q Consensus       100 ~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~  179 (282)
                      ..+..+++......+.++||.|.||.||+|+.+...  +....||||.++...  .+.++..|..|+.||.+++||||++
T Consensus       619 vreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pg--kre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIr  694 (996)
T KOG0196|consen  619 VREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPG--KREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIR  694 (996)
T ss_pred             HHHhhhhcChhheEEEEEEecccccceecccccCCC--CcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEE
Confidence            334456677888999999999999999999987543  566779999997653  3445566889999999999999999


Q ss_pred             eeEEEEeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEe
Q 023430          180 LRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       180 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                      |.|+......+.||.|||++|+|..+|..+ +.|...++.-+++.|+.||+||-+.+.|||||..+|||++.+..+|++|
T Consensus       695 LEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsD  774 (996)
T KOG0196|consen  695 LEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSD  774 (996)
T ss_pred             EEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEecc
Confidence            999999999999999999999999999764 5688999999999999999999999999999999999999999999999


Q ss_pred             cCcccccccch---h-------heeeccCccccC
Q 023430          259 SLNSHNQLCCF---F-------FFLFLGGGVFNF  282 (282)
Q Consensus       259 fg~s~~~~~~~---~-------~~~~~ape~~~~  282 (282)
                      ||+|+....|.   +       -.+|.|||++.|
T Consensus       775 FGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~  808 (996)
T KOG0196|consen  775 FGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY  808 (996)
T ss_pred             ccceeecccCCCccccccCCccceeecChhHhhh
Confidence            99999655552   1       368999999865

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=1.2e-28  Score=215.04  Aligned_cols=156  Identities=24%  Similarity=0.372  Sum_probs=126.1

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--CCEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--RSKLYLI  193 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lv  193 (282)
                      .+||+|+||.||+|+.+..   ..+..||+|.+.....     ...+.+|+.+++.++||||+++++++..  ....|+|
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~---~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDG---KDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLL   78 (317)
T ss_pred             eEeccCCCeeEEEEEecCC---CccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEE
Confidence            5799999999999987632   3457799998865421     2346789999999999999999998853  5678999


Q ss_pred             EeccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE----cCCCcEEEEecC
Q 023430          194 LDFINGGHLFFHLYRQ---------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM----DSDGHVMAAHSL  260 (282)
Q Consensus       194 ~e~~~~g~L~~~l~~~---------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl----~~~~~v~l~Dfg  260 (282)
                      |||+.+ +|..++...         ..+++..+..++.|++.||.|||+++|+||||||+|||+    +.++.+||+|||
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07867          79 FDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence            999875 666665421         247888999999999999999999999999999999999    566789999999


Q ss_pred             cccccc----------cchhheeeccCccc
Q 023430          261 NSHNQL----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~----------~~~~~~~~~ape~~  280 (282)
                      +++...          ...+++.|||||.+
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~  187 (317)
T cd07867         158 FARLFNSPLKPLADLDPVVVTFWYRAPELL  187 (317)
T ss_pred             ceeccCCCcccccccCcceecccccCcHHh
Confidence            986321          11568899999976

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.96  E-value=1.2e-28  Score=208.56  Aligned_cols=161  Identities=21%  Similarity=0.246  Sum_probs=137.1

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      ++||+|+||.||++.+...  ......+|+|.+......  ...+.+.+|+.++++++|+||+++++.+.. ...++|||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~--~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e   75 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTS--GGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTE   75 (257)
T ss_pred             CcCCccCcccEEeeeEecC--CCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEE
Confidence            4689999999999998642  123446999998776532  455678899999999999999999999988 88999999


Q ss_pred             ccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc------
Q 023430          196 FINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC------  267 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~------  267 (282)
                      |+++++|.+++....  .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....      
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  155 (257)
T cd05040          76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV  155 (257)
T ss_pred             ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccccee
Confidence            999999999987654  588999999999999999999999999999999999999999999999998864322      


Q ss_pred             ----chhheeeccCcccc
Q 023430          268 ----CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ----~~~~~~~~ape~~~  281 (282)
                          ..++..|++||.++
T Consensus       156 ~~~~~~~~~~y~~pE~~~  173 (257)
T cd05040         156 MEEHLKVPFAWCAPESLR  173 (257)
T ss_pred             cccCCCCCceecCHHHhc
Confidence                23567899999763

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.96  E-value=5.9e-31  Score=236.25  Aligned_cols=165  Identities=27%  Similarity=0.398  Sum_probs=148.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      -..++|+++.++|.|+||.||+++++     .+++..|+|+++....   ....-++.|+-+++.++|+|||.+++.+..
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~-----~s~elaavkvVkLep~---dd~~~iqqei~~~~dc~h~nivay~gsylr   83 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDK-----RSGELAAVKVVKLEPG---DDFSGIQQEIGMLRDCRHPNIVAYFGSYLR   83 (829)
T ss_pred             CCccchhheeeecCCcccchhhhccc-----ccCchhhheeeeccCC---ccccccccceeeeecCCCcChHHHHhhhhh
Confidence            34578999999999999999999977     5778899999876542   334557789999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+.+|++||||.||+|.+.-+--+.+++.++.+.++..++||+|||++|-+|||||-.|||+.+.|.||++|||.+....
T Consensus        84 ~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen   84 RDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             hcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh
Confidence            99999999999999998888777889999999999999999999999999999999999999999999999999997544


Q ss_pred             cc-------hhheeeccCcc
Q 023430          267 CC-------FFFFLFLGGGV  279 (282)
Q Consensus       267 ~~-------~~~~~~~ape~  279 (282)
                      +.       .||+-|||||+
T Consensus       164 ati~KrksfiGtpywmapEv  183 (829)
T KOG0576|consen  164 ATIAKRKSFIGTPYWMAPEV  183 (829)
T ss_pred             hhhhhhhcccCCccccchhH
Confidence            43       78999999996

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.96  E-value=9.3e-29  Score=209.88  Aligned_cols=164  Identities=18%  Similarity=0.268  Sum_probs=136.9

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|...      .+..+|+|.+.....    ..+.+.+|+.++++++|+||+++++.+.
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~   71 (260)
T cd05070           2 EIPRESLQLIKKLGNGQFGEVWMGTWN------GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS   71 (260)
T ss_pred             CCchHHhhhhheeccccCceEEEEEec------CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC
Confidence            345568999999999999999999764      234589998875432    2245788999999999999999998875


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                       ....+++|||+++++|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||++++++.++|+|||++.
T Consensus        72 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~  150 (260)
T cd05070          72 -EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLAR  150 (260)
T ss_pred             -CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeee
Confidence             45689999999999999988753  348899999999999999999999999999999999999999999999999986


Q ss_pred             ccccc--------hhheeeccCccc
Q 023430          264 NQLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~~~--------~~~~~~~ape~~  280 (282)
                      .....        .+...|||||.+
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~aPE~~  175 (260)
T cd05070         151 LIEDNEYTARQGAKFPIKWTAPEAA  175 (260)
T ss_pred             eccCcccccccCCCCCccccChHHH
Confidence            42211        234579999975

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.96  E-value=2.5e-28  Score=209.55  Aligned_cols=163  Identities=20%  Similarity=0.292  Sum_probs=134.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHH-HHHhcCCCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD-ILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ++|++.+.||+|+||.||+++++     .+++.||+|++...... .... .+..|+. .++.++|+||+++++++...+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~-~~~~-~~~~e~~~~~~~~~~~~iv~~~~~~~~~~   73 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHV-----PTGTIMAVKRIRATVNS-QEQK-RLLMDLDISMRSVDCPYTVTFYGALFREG   73 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEc-----CCCcEEEEEEEecCCCc-HHHH-HHHHHHHHHHHHcCCCCeeeeeEEEecCC
Confidence            47999999999999999999977     45788999998764321 2222 3444555 467778999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          189 KLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ..|++|||++ ++|..++..    ...+++..+..++.|++.||.|||++ +++||||||+|||++.++.++|+|||++.
T Consensus        74 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~  152 (283)
T cd06617          74 DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISG  152 (283)
T ss_pred             cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence            9999999997 577666643    24589999999999999999999997 99999999999999999999999999986


Q ss_pred             ccc------cchhheeeccCccc
Q 023430          264 NQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~------~~~~~~~~~ape~~  280 (282)
                      ...      ...++..|+|||.+
T Consensus       153 ~~~~~~~~~~~~~~~~y~aPE~~  175 (283)
T cd06617         153 YLVDSVAKTIDAGCKPYMAPERI  175 (283)
T ss_pred             ccccccccccccCCccccChhhc
Confidence            422      13568899999976

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.96  E-value=9.8e-29  Score=210.90  Aligned_cols=162  Identities=24%  Similarity=0.407  Sum_probs=137.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR-  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~-  187 (282)
                      +.|++.+.||+|+||.||+|.++     ..+..+|+|++....    .....+.+|+.+++.+ +|+||+++++.+... 
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   76 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN   76 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEc-----CCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecC
Confidence            46888899999999999999876     356789999986542    2234577899999998 699999999998753 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                           ...|++|||+.+++|..++...  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||
T Consensus        77 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg  156 (272)
T cd06637          77 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG  156 (272)
T ss_pred             CCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCC
Confidence                 4689999999999999988763  358899999999999999999999999999999999999999999999999


Q ss_pred             ccccccc-------chhheeeccCccc
Q 023430          261 NSHNQLC-------CFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~-------~~~~~~~~ape~~  280 (282)
                      ++.....       ..|+..|+|||++
T Consensus       157 ~~~~~~~~~~~~~~~~g~~~y~aPE~~  183 (272)
T cd06637         157 VSAQLDRTVGRRNTFIGTPYWMAPEVI  183 (272)
T ss_pred             CceecccccccCCcccccccccCHhHh
Confidence            9864221       2568899999986

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=4e-29  Score=212.04  Aligned_cols=162  Identities=15%  Similarity=0.188  Sum_probs=134.0

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCC--CCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDG--DSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  193 (282)
                      +.||+|+||.||+|.++...+.  .....+++|.+....   ....+.+.+|+.+++.+.||||+++++++......++|
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence            3689999999999987643321  233457888775432   23345677899999999999999999999998999999


Q ss_pred             EeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc--------EEEEecCcccc
Q 023430          194 LDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH--------VMAAHSLNSHN  264 (282)
Q Consensus       194 ~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~--------v~l~Dfg~s~~  264 (282)
                      |||+++|+|..++...+ .+++..++.++.|++.||.|||++||+||||||+|||++.++.        ++++|||++..
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            99999999999987644 5899999999999999999999999999999999999987765        69999999864


Q ss_pred             ccc---chhheeeccCccc
Q 023430          265 QLC---CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~---~~~~~~~~ape~~  280 (282)
                      ...   ..++..|||||.+
T Consensus       158 ~~~~~~~~~~~~y~aPE~~  176 (258)
T cd05078         158 VLPKEILLERIPWVPPECI  176 (258)
T ss_pred             cCCchhccccCCccCchhc
Confidence            332   2568899999986

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.96  E-value=1.9e-28  Score=207.10  Aligned_cols=162  Identities=20%  Similarity=0.350  Sum_probs=142.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||++.++     ..+..+++|.+.....     .+.+.+|+.+++.++|+||+++++.+....
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~   71 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHK-----ETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNT   71 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEc-----CCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence            367999999999999999999976     3457899999865432     456889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..|+++||+.+++|.+++.. ...+++..+..++.|++.||.|||+.+|+||||+|+||+++.++.++|+|||++.....
T Consensus        72 ~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          72 DLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             cEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence            99999999999999999865 34689999999999999999999999999999999999999999999999999864222


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..++..|++||.+
T Consensus       152 ~~~~~~~~~~~~~y~~PE~~  171 (256)
T cd06612         152 TMAKRNTVIGTPFWMAPEVI  171 (256)
T ss_pred             CccccccccCCccccCHHHH
Confidence                   2468899999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.96  E-value=8.8e-29  Score=211.70  Aligned_cols=166  Identities=35%  Similarity=0.622  Sum_probs=145.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~  188 (282)
                      ++|.+.+.||+|+||.||++..+     ..+..||+|++.+.........+.+.+|+.+++.++ |+||+++++.+...+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~   75 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEK-----ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE   75 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEc-----CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence            37999999999999999999876     356789999987654433444566888999999998 999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC  268 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~  268 (282)
                      ..++||||+++++|.+++.+.+.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++++|||++......
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~  155 (280)
T cd05581          76 NLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN  155 (280)
T ss_pred             eEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence            99999999999999999988888999999999999999999999999999999999999999999999999988632211


Q ss_pred             ---------------------------hhheeeccCccc
Q 023430          269 ---------------------------FFFFLFLGGGVF  280 (282)
Q Consensus       269 ---------------------------~~~~~~~ape~~  280 (282)
                                                 .++..|++||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~  194 (280)
T cd05581         156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELL  194 (280)
T ss_pred             cccccCCCCCccccccccccccccccccCCccccCHHHh
Confidence                                       357889999975

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.96  E-value=4.8e-29  Score=211.55  Aligned_cols=162  Identities=19%  Similarity=0.246  Sum_probs=140.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      .+|++.++||+|+||.||+|.++.      +..+++|++.....   ...+.+.+|+.+++.++|+||+++++++.....
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~------~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   76 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN------RVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP   76 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC------CCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCC
Confidence            468999999999999999998762      56799999875432   234457889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      .++||||+++++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~  156 (261)
T cd05148          77 VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE  156 (261)
T ss_pred             eEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence            99999999999999999753  3578999999999999999999999999999999999999999999999999864322


Q ss_pred             c-------hhheeeccCccc
Q 023430          268 C-------FFFFLFLGGGVF  280 (282)
Q Consensus       268 ~-------~~~~~~~ape~~  280 (282)
                      +       .++..|++||.+
T Consensus       157 ~~~~~~~~~~~~~~~~PE~~  176 (261)
T cd05148         157 DVYLSSDKKIPYKWTAPEAA  176 (261)
T ss_pred             ccccccCCCCceEecCHHHH
Confidence            2       335689999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.3e-28  Score=207.33  Aligned_cols=160  Identities=38%  Similarity=0.621  Sum_probs=134.6

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHH-HhcCCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL-TKVTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+|...     ..++.||+|++.+...........+..|..++ ...+|+||+++++++...+..|++|
T Consensus         2 ~~l~~g~~~~v~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKR-----STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEec-----CCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEE
Confidence            56899999999999876     35678999998765433333333344455444 4558999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---chhh
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---CFFF  271 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---~~~~  271 (282)
                      ||+++++|..++...+.+++..+..++.|++.||.|||+.+++||||+|+||+++.++.++|+|||++.....   ..++
T Consensus        77 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  156 (260)
T cd05611          77 EYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGT  156 (260)
T ss_pred             eccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCC
Confidence            9999999999998878899999999999999999999999999999999999999999999999999875332   2568


Q ss_pred             eeeccCccc
Q 023430          272 FLFLGGGVF  280 (282)
Q Consensus       272 ~~~~ape~~  280 (282)
                      ..|++||.+
T Consensus       157 ~~y~~pe~~  165 (260)
T cd05611         157 PDYLAPETI  165 (260)
T ss_pred             cCccChhhh
Confidence            899999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.96  E-value=4.1e-28  Score=205.27  Aligned_cols=164  Identities=27%  Similarity=0.492  Sum_probs=141.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||+++..     ..++.||+|.+...... ....+.+.+|+.+++.++|+||+++++++...+..
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSK-----EDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNL   74 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEc-----CCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeE
Confidence            5899999999999999999876     35678999998754332 23345678899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          191 YLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      |+||||+.+++|..++....  .+++..++.++.|++.||.|||+++++|+||+|+|||++.++.++++|||++..... 
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~  154 (256)
T cd08218          75 YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST  154 (256)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence            99999999999999886543  478999999999999999999999999999999999999999999999999864322 


Q ss_pred             ------chhheeeccCccc
Q 023430          268 ------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ------~~~~~~~~ape~~  280 (282)
                            ..++..|+|||.+
T Consensus       155 ~~~~~~~~~~~~~~~pe~~  173 (256)
T cd08218         155 VELARTCIGTPYYLSPEIC  173 (256)
T ss_pred             hhhhhhccCCccccCHHHh
Confidence                  2467889999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.96  E-value=2.2e-28  Score=208.83  Aligned_cols=161  Identities=24%  Similarity=0.334  Sum_probs=131.5

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      +.||+|+||.||+++.+.++   ....+++|.+....  .....+.+.+|+.+++++ +||||+++++++...+..|+||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~---~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~   75 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDG---LRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI   75 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCC---CeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEE
Confidence            36899999999999876321   12346888776422  223345678899999999 7999999999999999999999


Q ss_pred             eccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEe
Q 023430          195 DFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                      ||+++|+|.+++....                .+++..++.++.|++.||+|||++|++||||||+|||++.++.++++|
T Consensus        76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~d  155 (270)
T cd05047          76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIAD  155 (270)
T ss_pred             EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECC
Confidence            9999999999987542                367889999999999999999999999999999999999999999999


Q ss_pred             cCcccccccc------hhheeeccCcccc
Q 023430          259 SLNSHNQLCC------FFFFLFLGGGVFN  281 (282)
Q Consensus       259 fg~s~~~~~~------~~~~~~~ape~~~  281 (282)
                      ||++......      ..+..|+|||.+.
T Consensus       156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~  184 (270)
T cd05047         156 FGLSRGQEVYVKKTMGRLPVRWMAIESLN  184 (270)
T ss_pred             CCCccccchhhhccCCCCccccCChHHHc
Confidence            9998632211      2255799999863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.96  E-value=2.7e-28  Score=209.47  Aligned_cols=162  Identities=20%  Similarity=0.375  Sum_probs=138.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|++|.||+|++.     .++..||+|++.....  ....+.+.+|+.+++.++|+||+++++++...+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   73 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNR-----TTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKL   73 (284)
T ss_pred             CceEeeeeccCCceEEEEEEEC-----CCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcE
Confidence            5899999999999999999976     3567899999876432  22234567899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          191 YLILDFINGGHLFFHLYRQ---GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ++||||+++ +|..++...   ..+++..+..++.|++.||.|||++||+||||||+||++++++.++++|||++.... 
T Consensus        74 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~  152 (284)
T cd07836          74 MLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI  152 (284)
T ss_pred             EEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence            999999985 787777653   358999999999999999999999999999999999999999999999999986321 


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...++..|++||.+
T Consensus       153 ~~~~~~~~~~~~~y~~PE~~  172 (284)
T cd07836         153 PVNTFSNEVVTLWYRAPDVL  172 (284)
T ss_pred             CccccccccccccccChHHh
Confidence                  22457889999976

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.5e-28  Score=206.93  Aligned_cols=161  Identities=18%  Similarity=0.223  Sum_probs=134.5

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      ++||+|+||.||+|.+....  .....+|+|.+......  ...+.+.+|+.+++.++|+||+++++++. ....++|||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~--~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e   75 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKS--GKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVME   75 (257)
T ss_pred             CccCccCceeEEEeEeeccC--CCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEE
Confidence            46999999999999876432  13467999998765432  33456888999999999999999999876 456899999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-------
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-------  268 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-------  268 (282)
                      |+++++|.+++.....+++..+..++.|++.||.|||.++++||||||+|||++.++.++|+|||++......       
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~  155 (257)
T cd05060          76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT  155 (257)
T ss_pred             eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence            9999999999988778999999999999999999999999999999999999999999999999998632111       


Q ss_pred             ---hhheeeccCcccc
Q 023430          269 ---FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ---~~~~~~~ape~~~  281 (282)
                         .++..|+|||.+.
T Consensus       156 ~~~~~~~~y~aPE~~~  171 (257)
T cd05060         156 TAGRWPLKWYAPECIN  171 (257)
T ss_pred             cCccccccccCHHHhc
Confidence               1235799999763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.96  E-value=2.3e-28  Score=206.06  Aligned_cols=158  Identities=21%  Similarity=0.321  Sum_probs=133.2

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      ++||+|+||.||++...      .+..+|+|++....  .......+.+|+.+++.++|+||+++++++...+..++|||
T Consensus         1 ~~ig~g~~g~vy~~~~~------~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   72 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK------DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVME   72 (250)
T ss_pred             CccCCCCCceEEEEEec------CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEE
Confidence            36899999999999753      35679999876543  22233457889999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc------
Q 023430          196 FINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC------  268 (282)
Q Consensus       196 ~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~------  268 (282)
                      |+++++|..++... ..+.+..+..++.|++.||.|||++|++||||||+||+++.++.++++|||++......      
T Consensus        73 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  152 (250)
T cd05085          73 LVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG  152 (250)
T ss_pred             CCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCC
Confidence            99999999988653 45789999999999999999999999999999999999999999999999998642221      


Q ss_pred             --hhheeeccCcccc
Q 023430          269 --FFFFLFLGGGVFN  281 (282)
Q Consensus       269 --~~~~~~~ape~~~  281 (282)
                        .++..|+|||.++
T Consensus       153 ~~~~~~~y~aPE~~~  167 (250)
T cd05085         153 LKQIPIKWTAPEALN  167 (250)
T ss_pred             CCCCcccccCHHHhc
Confidence              2256799999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=2.6e-28  Score=209.40  Aligned_cols=168  Identities=20%  Similarity=0.261  Sum_probs=141.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--C
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--R  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~  187 (282)
                      .+|++.+.||+|+||.||++.+.... ...+..+|+|++......  ...+.+.+|+.+++.++|+||+++++++..  .
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~   80 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLG-DNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG   80 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCC-CCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence            46888899999999999999876432 235678999998765432  345678899999999999999999998877  5


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ...+++|||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++....
T Consensus        81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038          81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence            57999999999999999987654 58999999999999999999999999999999999999999999999999997543


Q ss_pred             c----------chhheeeccCccc
Q 023430          267 C----------CFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~----------~~~~~~~~ape~~  280 (282)
                      .          ..+...|++||.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~Pe~~  184 (284)
T cd05038         161 EDKDYYYVKEPGESPIFWYAPECL  184 (284)
T ss_pred             cCCcceeccCCCCCcccccCcHHH
Confidence            1          1335569999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.96  E-value=8.4e-29  Score=210.42  Aligned_cols=164  Identities=24%  Similarity=0.346  Sum_probs=143.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||++.++     ..+..+++|.+.....  ....+.+.+|+++++.++|+||+++++.+...+.
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   73 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHR-----PTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGD   73 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEc-----CCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCE
Confidence            36788899999999999999976     4567899998876532  2344567889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      .++++||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||.+.....
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~  153 (265)
T cd06605          74 ISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN  153 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence            99999999999999999775 678999999999999999999999 9999999999999999999999999999864322


Q ss_pred             -----chhheeeccCccc
Q 023430          268 -----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -----~~~~~~~~ape~~  280 (282)
                           ..++..|++||.+
T Consensus       154 ~~~~~~~~~~~y~~PE~~  171 (265)
T cd06605         154 SLAKTFVGTSSYMAPERI  171 (265)
T ss_pred             HHhhcccCChhccCHHHH
Confidence                 3568899999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.96  E-value=4.5e-28  Score=206.55  Aligned_cols=163  Identities=23%  Similarity=0.314  Sum_probs=136.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      +++.....||+|+||.||++.++     ..+..|++|.+....   ....+.+.+|+.+++.++|+||+++++++..++.
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   79 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDL-----STQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF   79 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEec-----CCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence            34444568999999999999876     346679999876543   2234568899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIF--REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNSHNQ  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~--~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~~~  265 (282)
                      .++++||+++++|..++... ..+  ++..+..++.|++.||.|||++||+||||||+||+++. ++.++|+|||++...
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624          80 FKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            99999999999999988764 445  78888999999999999999999999999999999986 679999999988532


Q ss_pred             c-------cchhheeeccCccc
Q 023430          266 L-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~-------~~~~~~~~~ape~~  280 (282)
                      .       ...++..|+|||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~aPE~~  181 (268)
T cd06624         160 AGINPCTETFTGTLQYMAPEVI  181 (268)
T ss_pred             ccCCCccccCCCCccccChhhh
Confidence            1       12468899999976

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.96  E-value=3.1e-28  Score=207.81  Aligned_cols=169  Identities=20%  Similarity=0.237  Sum_probs=139.2

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ...+|.+.+.||+|+||.||+|.+....  .....+++|......  .....+.+.+|+.+++.++|+||+++++++.. 
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-   78 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPE--NEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-   78 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCC--CCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-
Confidence            3457999999999999999999876331  234468999876543  13344568889999999999999999998875 


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ...|+||||+++++|.+++.... .+++..+..++.|++.||.|||+++++||||||+|||++.++.++++|||++....
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  158 (270)
T cd05056          79 NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE  158 (270)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence            45789999999999999997643 58999999999999999999999999999999999999999999999999886322


Q ss_pred             cc--------hhheeeccCcccc
Q 023430          267 CC--------FFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~~--------~~~~~~~ape~~~  281 (282)
                      ..        .+...|+|||.+.
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~  181 (270)
T cd05056         159 DESYYKASKGKLPIKWMAPESIN  181 (270)
T ss_pred             cccceecCCCCccccccChhhhc
Confidence            11        1245799999864

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=4.1e-28  Score=205.99  Aligned_cols=165  Identities=20%  Similarity=0.296  Sum_probs=138.1

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||++...      ....+++|.+....    ...+.+.+|+.+++.++|+||+++++.+.
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   71 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYN------KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT   71 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEec------CCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEc
Confidence            455678999999999999999999754      23458999876432    23456788999999999999999999987


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      . ...+++|||+++++|.+++.+.  ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+.
T Consensus        72 ~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~  150 (260)
T cd05073          72 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR  150 (260)
T ss_pred             C-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCccee
Confidence            7 7789999999999999998763  346788899999999999999999999999999999999999999999999885


Q ss_pred             ccc-----c---chhheeeccCcccc
Q 023430          264 NQL-----C---CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~-----~---~~~~~~~~ape~~~  281 (282)
                      ...     +   ..++..|+|||.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~PE~~~  176 (260)
T cd05073         151 VIEDNEYTAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             eccCCCcccccCCcccccccCHhHhc
Confidence            321     1   13356799999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.96  E-value=1.8e-28  Score=209.22  Aligned_cols=165  Identities=19%  Similarity=0.227  Sum_probs=132.4

Q ss_pred             EEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-----
Q 023430          113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-----  187 (282)
Q Consensus       113 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----  187 (282)
                      .+.++||+|+||.||+|.+...   .....+|+|.++... ......+.+.+|+.+++.++|+||+++++.+...     
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~---~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   77 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQD---DSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEG   77 (272)
T ss_pred             ccccccCcccCceEEEeEEccC---CCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccC
Confidence            4668899999999999987632   122358999886543 2334456788899999999999999999876432     


Q ss_pred             -CEEEEEEeccCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          188 -SKLYLILDFINGGHLFFHLYR------QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       188 -~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                       ...+++|||+.+|+|..++..      ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||
T Consensus        78 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          78 YPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCC
Confidence             257899999999999887742      1347899999999999999999999999999999999999999999999999


Q ss_pred             ccccccc-------c--hhheeeccCcccc
Q 023430          261 NSHNQLC-------C--FFFFLFLGGGVFN  281 (282)
Q Consensus       261 ~s~~~~~-------~--~~~~~~~ape~~~  281 (282)
                      ++.....       .  .+++.|++||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  187 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLA  187 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHcc
Confidence            9864221       1  2366899999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.96  E-value=5.4e-28  Score=204.29  Aligned_cols=165  Identities=25%  Similarity=0.384  Sum_probs=141.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||++...     ..+..+|+|.+..... .....+.+.+|+.+++.++|+||+++++.+...+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   74 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRK-----ADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKAL   74 (256)
T ss_pred             CceEEEEecccCceEEEEEEEc-----CCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEE
Confidence            5899999999999999999876     3567899999876543 233456788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEEEecCcccccc-
Q 023430          191 YLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMAAHSLNSHNQL-  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l~Dfg~s~~~~-  266 (282)
                      ++||||+++++|.+++...  ..+++..+..++.|++.||.|||++||+|+||||+||+++.++ .++++|||.+.... 
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220          75 MIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence            9999999999999998764  3488999999999999999999999999999999999998654 57999999986332 


Q ss_pred             -----cchhheeeccCcccc
Q 023430          267 -----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -----~~~~~~~~~ape~~~  281 (282)
                           ...++..|+|||.+.
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~  174 (256)
T cd08220         155 KSKAYTVVGTPCYISPELCE  174 (256)
T ss_pred             CccccccccCCcccCchhcc
Confidence                 125688999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.8e-28  Score=208.52  Aligned_cols=163  Identities=25%  Similarity=0.436  Sum_probs=142.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||.|+||.||++.+.     ..+..+|+|++....  .......+.+|+.+++.++|+||+++++.+.....
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   73 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDK-----RTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSK   73 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEEC-----CCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCe
Confidence            36888899999999999999976     356789999986543  22334567889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      +|+|+||+++++|.+++... .+++..+..++.|++.||.|||+++++||||+|+||++++++.++|+|||++....   
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  152 (274)
T cd06609          74 LWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM  152 (274)
T ss_pred             EEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence            99999999999999988755 78999999999999999999999999999999999999999999999999885321   


Q ss_pred             ----cchhheeeccCccc
Q 023430          267 ----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ----~~~~~~~~~ape~~  280 (282)
                          ...++..|++||.+
T Consensus       153 ~~~~~~~~~~~y~~PE~~  170 (274)
T cd06609         153 SKRNTFVGTPFWMAPEVI  170 (274)
T ss_pred             cccccccCCccccChhhh
Confidence                22567889999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.96  E-value=6.6e-28  Score=210.83  Aligned_cols=165  Identities=19%  Similarity=0.277  Sum_probs=140.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ..|+..+.||+|+||.||++++.     ..+..+|+|++.............+.+|+++++.++|+|++++++++.....
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   99 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDV-----RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHT   99 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEc-----CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCe
Confidence            35788899999999999999876     3467899999875433333445568889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .|+||||+.+ +|.+.+.. ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++..... 
T Consensus       100 ~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (317)
T cd06635         100 AWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA  178 (317)
T ss_pred             EEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence            9999999975 66666643 45689999999999999999999999999999999999999999999999998864332 


Q ss_pred             --chhheeeccCccc
Q 023430          268 --CFFFFLFLGGGVF  280 (282)
Q Consensus       268 --~~~~~~~~ape~~  280 (282)
                        ..++..|+|||.+
T Consensus       179 ~~~~~~~~y~aPE~~  193 (317)
T cd06635         179 NSFVGTPYWMAPEVI  193 (317)
T ss_pred             ccccCCccccChhhh
Confidence              2578899999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.96  E-value=2.3e-28  Score=213.01  Aligned_cols=166  Identities=22%  Similarity=0.319  Sum_probs=136.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--C
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--S  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~  188 (282)
                      .|++.+.||+|+||.||+|..+..   ..+..||+|.+...........+.+.+|+.+++.++||||+++++++...  .
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~---~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNG---KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADK   77 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCC---CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCc
Confidence            488999999999999999997631   15678999998764322233345577899999999999999999999988  7


Q ss_pred             EEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC----CCcEEEEec
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS----DGHVMAAHS  259 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~----~~~v~l~Df  259 (282)
                      .+|+||||+++ +|...+...     ..+++..+..++.|++.||.|||+++|+||||||+|||++.    ++.+||+||
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          78 SVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             eEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            89999999976 565555422     25789999999999999999999999999999999999999    899999999


Q ss_pred             Cccccccc----------chhheeeccCccc
Q 023430          260 LNSHNQLC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~----------~~~~~~~~ape~~  280 (282)
                      |++.....          ..++..|+|||.+
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  187 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELL  187 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHH
Confidence            99864221          1457889999965

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.96  E-value=2.3e-28  Score=212.41  Aligned_cols=171  Identities=18%  Similarity=0.199  Sum_probs=138.6

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +...+|+..+.||+|+||.||++.+...+.. ....+|+|.+.....  ......+.+|+.+++.++|+||+++++++..
T Consensus         4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~   80 (303)
T cd05110           4 LKETELKRVKVLGSGAFGTVYKGIWVPEGET-VKIPVAIKILNETTG--PKANVEFMDEALIMASMDHPHLVRLLGVCLS   80 (303)
T ss_pred             cchhhceeccccccCCCccEEEEEEecCCCc-ceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEcC
Confidence            3456899999999999999999987643321 223578898765432  2223457789999999999999999998865


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      . ..++++||+++|+|.+++.... .+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          81 P-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             C-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence            4 5779999999999999987643 5889999999999999999999999999999999999999999999999999632


Q ss_pred             cc---------chhheeeccCcccc
Q 023430          266 LC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~---------~~~~~~~~ape~~~  281 (282)
                      ..         ..++..|||||.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~  184 (303)
T cd05110         160 EGDEKEYNADGGKMPIKWMALECIH  184 (303)
T ss_pred             cCcccccccCCCccccccCCHHHhc
Confidence            21         12356899999763

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.96  E-value=5.5e-28  Score=205.02  Aligned_cols=164  Identities=26%  Similarity=0.407  Sum_probs=144.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|++|.||+|..+     ..++.|++|++......  ...+.+.+|+..+..++|+||+++++.+.....
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~-----~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   73 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHK-----PTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGE   73 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEc-----CCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCe
Confidence            36899999999999999999977     35678999998765321  345668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .+++|||+++++|.+++.....+++..+..++.|++.||.|||+ ++++||||+|+||+++.++.++|+|||.+..... 
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~  153 (264)
T cd06623          74 ISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT  153 (264)
T ss_pred             EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence            99999999999999999877889999999999999999999999 9999999999999999999999999998863221 


Q ss_pred             ------chhheeeccCccc
Q 023430          268 ------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ------~~~~~~~~ape~~  280 (282)
                            ..++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~y~~pE~~  172 (264)
T cd06623         154 LDQCNTFVGTVTYMSPERI  172 (264)
T ss_pred             CCcccceeecccccCHhhh
Confidence                  2457899999976

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.96  E-value=4e-28  Score=206.06  Aligned_cols=163  Identities=21%  Similarity=0.270  Sum_probs=135.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||++.+..      ...+|+|.+.....    ..+.+.+|+.+++.++|+||+++++++. 
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~------~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-   71 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNG------TTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-   71 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcC------CceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-
Confidence            344679999999999999999998652      23589998765432    2345778999999999999999998875 


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+..+++|||+.+++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++..
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~  151 (260)
T cd05069          72 EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARL  151 (260)
T ss_pred             CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceE
Confidence            456899999999999999987542  478899999999999999999999999999999999999999999999999863


Q ss_pred             ccc--------chhheeeccCccc
Q 023430          265 QLC--------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~--------~~~~~~~~ape~~  280 (282)
                      ...        ..++..|+|||.+
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~Pe~~  175 (260)
T cd05069         152 IEDNEYTARQGAKFPIKWTAPEAA  175 (260)
T ss_pred             ccCCcccccCCCccchhhCCHHHh
Confidence            211        1235679999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.96  E-value=4.9e-28  Score=204.76  Aligned_cols=163  Identities=23%  Similarity=0.335  Sum_probs=138.9

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      .+.+|++.+.||+|+||.||++.+.      .+..+|+|++......    ...+.+|+++++.++|+||+++++++...
T Consensus         2 ~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (256)
T cd05112           2 HPSELTLVQEIGSGQFGLVWLGYWL------EKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTER   71 (256)
T ss_pred             ChhHeEEEeeecCcccceEEEEEEe------CCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccC
Confidence            3468999999999999999999865      2456899988654321    23477899999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ...++||||+++++|.+++... ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++....
T Consensus        72 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  151 (256)
T cd05112          72 SPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVL  151 (256)
T ss_pred             CceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecc
Confidence            9999999999999999988754 458899999999999999999999999999999999999999999999999886432


Q ss_pred             c--------chhheeeccCccc
Q 023430          267 C--------CFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~--------~~~~~~~~ape~~  280 (282)
                      .        ..++..|+|||.+
T Consensus       152 ~~~~~~~~~~~~~~~~~aPe~~  173 (256)
T cd05112         152 DDQYTSSTGTKFPVKWSSPEVF  173 (256)
T ss_pred             cCcccccCCCccchhhcCHhHh
Confidence            1        1235689999976

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.96  E-value=6.4e-28  Score=204.46  Aligned_cols=164  Identities=22%  Similarity=0.382  Sum_probs=139.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--CC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--RS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~  188 (282)
                      +|++.+.||.|+||.||++.+.     ..+..+|+|++..... .....+.+..|+.+++.++|+||+++++.+..  ..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRK-----SDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ   74 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeec-----CCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCC
Confidence            5889999999999999999876     3567799998875443 23345668889999999999999999987754  45


Q ss_pred             EEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----HCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          189 KLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLH-----KCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH-----~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                      ..|++|||+++++|..++..    ...+++..++.++.|++.||.|||     +.+++|+||||+||+++.++.++++||
T Consensus        75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~  154 (265)
T cd08217          75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF  154 (265)
T ss_pred             EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecc
Confidence            78999999999999988865    356899999999999999999999     889999999999999999999999999


Q ss_pred             Cccccccc-------chhheeeccCccc
Q 023430          260 LNSHNQLC-------CFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~-------~~~~~~~~ape~~  280 (282)
                      |++.....       ..+++.|++||.+
T Consensus       155 g~~~~~~~~~~~~~~~~~~~~~~~pE~~  182 (265)
T cd08217         155 GLAKILGHDSSFAKTYVGTPYYMSPEQL  182 (265)
T ss_pred             cccccccCCcccccccccCCCccChhhh
Confidence            98864221       2468899999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.1e-28  Score=208.44  Aligned_cols=162  Identities=23%  Similarity=0.396  Sum_probs=139.8

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC---CCCeeeeeEEEEeC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT---HPFIVQLRYSFQTR  187 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~  187 (282)
                      .|++.+.||+|+||.||+|.+.     ..+..||+|.+....  .....+.+.+|+.+++.++   |+||+++++++...
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~   74 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHV-----PTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG   74 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEc-----CCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence            4778899999999999999976     356789999886542  2234456788999999986   99999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ...|+||||+++++|.+++.. +.+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.....
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06917          75 PRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ  153 (277)
T ss_pred             CEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence            999999999999999988855 4789999999999999999999999999999999999999999999999998853221


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..|+..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~  173 (277)
T cd06917         154 NSSKRSTFVGTPYWMAPEVI  173 (277)
T ss_pred             CccccccccCCcceeCHHHh
Confidence                   2568889999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.96  E-value=5.2e-28  Score=208.39  Aligned_cols=168  Identities=46%  Similarity=0.770  Sum_probs=142.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-hhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-KNHVDYMKAERDILTKV-THPFIVQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~  188 (282)
                      +|++.+.||+|+||.||+++.....  ..+..||||++++..... ....+.+.+|+.++..+ +|+||+++++.+....
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~--~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~   78 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGH--DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT   78 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccc--cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC
Confidence            4889999999999999999865322  356779999987543222 22345677899999999 5999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC  268 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~  268 (282)
                      ..++||||+.+++|..++.....+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||++......
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  158 (288)
T cd05583          79 KLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE  158 (288)
T ss_pred             EEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence            99999999999999999887777899999999999999999999999999999999999999999999999988642211


Q ss_pred             --------hhheeeccCccc
Q 023430          269 --------FFFFLFLGGGVF  280 (282)
Q Consensus       269 --------~~~~~~~ape~~  280 (282)
                              .++..|+|||.+
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~  178 (288)
T cd05583         159 EEERAYSFCGTIEYMAPEVI  178 (288)
T ss_pred             cccccccccCCccccCHHHh
Confidence                    368899999976

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.96  E-value=1.1e-28  Score=213.43  Aligned_cols=161  Identities=22%  Similarity=0.335  Sum_probs=137.3

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|.....||+|+||.||++...     ..+..||||.+....   ....+.+.+|+.+++.++|+||+++++.+...+..
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~   94 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEK-----HTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDEL   94 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEEC-----CCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeE
Confidence            3444567999999999999865     356789999886532   23345578899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc----
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL----  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~----  266 (282)
                      |+||||+++++|..++.. +.+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++....    
T Consensus        95 ~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~  173 (292)
T cd06658          95 WVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP  173 (292)
T ss_pred             EEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence            999999999999887754 468999999999999999999999999999999999999999999999999885321    


Q ss_pred             ---cchhheeeccCccc
Q 023430          267 ---CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ---~~~~~~~~~ape~~  280 (282)
                         ...++..|+|||.+
T Consensus       174 ~~~~~~~~~~y~aPE~~  190 (292)
T cd06658         174 KRKSLVGTPYWMAPEVI  190 (292)
T ss_pred             cCceeecCccccCHHHH
Confidence               12568899999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=3.9e-28  Score=215.35  Aligned_cols=163  Identities=20%  Similarity=0.326  Sum_probs=135.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++.+.||+|+||.||+|...     ..+..||+|++.+... .......+.+|+.+++.++|+||+++++++... 
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDT-----VTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK   88 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEEC-----CCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence            467999999999999999999876     3567899999865322 223334567899999999999999999988643 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                           ...|+||||+.+ +|...+...  +++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus        89 ~~~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~  165 (353)
T cd07850          89 SLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA  165 (353)
T ss_pred             CccccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence                 357999999965 777777543  889999999999999999999999999999999999999999999999999


Q ss_pred             ccccc------chhheeeccCccc
Q 023430          263 HNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~------~~~~~~~~ape~~  280 (282)
                      .....      ..++..|+|||.+
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~  189 (353)
T cd07850         166 RTAGTSFMMTPYVVTRYYRAPEVI  189 (353)
T ss_pred             eeCCCCCCCCCCcccccccCHHHH
Confidence            74321      2467889999976

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.96  E-value=3.3e-28  Score=205.82  Aligned_cols=161  Identities=20%  Similarity=0.303  Sum_probs=135.5

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ...+|++.+.||+|+||.||++..       .++.||+|++....     ..+.+.+|+.+++.++|+||+++++++...
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   71 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGEY-------TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN   71 (254)
T ss_pred             cHHHceeeeeeccCCCCceEeccc-------CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence            346799999999999999998763       35569999886532     234578899999999999999999988654


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                       ..+++|||+++++|.+++....  .+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++...
T Consensus        72 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~  150 (254)
T cd05083          72 -GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVG  150 (254)
T ss_pred             -CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceec
Confidence             5799999999999999987643  4788999999999999999999999999999999999999999999999998743


Q ss_pred             ccc----hhheeeccCcccc
Q 023430          266 LCC----FFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~~----~~~~~~~ape~~~  281 (282)
                      ...    .....|+|||.+.
T Consensus       151 ~~~~~~~~~~~~y~~pe~~~  170 (254)
T cd05083         151 SMGVDNSKLPVKWTAPEALK  170 (254)
T ss_pred             cccCCCCCCCceecCHHHhc
Confidence            221    2356799999763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.6e-28  Score=206.59  Aligned_cols=163  Identities=25%  Similarity=0.403  Sum_probs=139.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  187 (282)
                      .++|++.+.||+|+||.||+|.++     ..+..+++|++.....    ..+.+.+|+.+++++ +|+||+++++++...
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   75 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHK-----KTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKK   75 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEEC-----CCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEec
Confidence            478999999999999999999976     3456799998875432    235588899999998 699999999999764


Q ss_pred             C------EEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEE
Q 023430          188 S------KLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       188 ~------~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~  257 (282)
                      .      .+|+||||+++++|.+++..    ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~  155 (275)
T cd06608          76 NPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLV  155 (275)
T ss_pred             CCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEEC
Confidence            4      58999999999999888764    3468999999999999999999999999999999999999999999999


Q ss_pred             ecCcccccc-------cchhheeeccCccc
Q 023430          258 HSLNSHNQL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~-------~~~~~~~~~ape~~  280 (282)
                      |||.+....       ...++..|+|||.+
T Consensus       156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  185 (275)
T cd06608         156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVI  185 (275)
T ss_pred             CCccceecccchhhhcCccccccccCHhHh
Confidence            999885321       22568889999976

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2e-30  Score=226.72  Aligned_cols=171  Identities=27%  Similarity=0.468  Sum_probs=154.2

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+...+++++..||-|+||.|-+++.+.     ....+|+|++++..+.+..+.+.+..|..||..++.+.||++|..|
T Consensus       415 a~v~l~dl~~iaTLGvGgFGRVELV~~~~-----~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf  489 (732)
T KOG0614|consen  415 AQVKLSDLKRIATLGVGGFGRVELVKVNS-----QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF  489 (732)
T ss_pred             cccchhhhhhhhhcccCccceEEEEEecc-----cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh
Confidence            34556788889999999999999988763     2235899999988777777778888999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+...+|++||-|-||.|...+.+++.|.+..++.++..+++|++|||++|||.|||||+|+|+|.+|.+||.|||+++.
T Consensus       490 rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKk  569 (732)
T KOG0614|consen  490 RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKK  569 (732)
T ss_pred             ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999975


Q ss_pred             cccc------hhheeeccCccc
Q 023430          265 QLCC------FFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~~------~~~~~~~ape~~  280 (282)
                      ....      .||+.|.|||++
T Consensus       570 i~~g~KTwTFcGTpEYVAPEII  591 (732)
T KOG0614|consen  570 IGSGRKTWTFCGTPEYVAPEII  591 (732)
T ss_pred             hccCCceeeecCCcccccchhh
Confidence            4333      789999999986

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.96  E-value=1e-27  Score=206.82  Aligned_cols=163  Identities=25%  Similarity=0.412  Sum_probs=137.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  187 (282)
                      .++|++.+.||+|+||.||++..+     ..++.+|+|++....    .....+.+|+.+++++ +|+||+++++++...
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~-----~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNK-----KDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEEC-----CCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            468999999999999999999876     356789999886432    1234567899999998 799999999988753


Q ss_pred             -----CEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEe
Q 023430          188 -----SKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                           +..|+||||+++++|.+++..    ...+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~d  171 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVD  171 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEee
Confidence                 368999999999999888753    35689999999999999999999999999999999999999999999999


Q ss_pred             cCcccccc-------cchhheeeccCccc
Q 023430          259 SLNSHNQL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~-------~~~~~~~~~ape~~  280 (282)
                      ||++....       ...++..|+|||.+
T Consensus       172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~  200 (291)
T cd06639         172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVI  200 (291)
T ss_pred             cccchhcccccccccCccCCccccChhhh
Confidence            99886422       22568899999986

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1e-27  Score=202.11  Aligned_cols=165  Identities=26%  Similarity=0.423  Sum_probs=145.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|++|.||++.+.     ..+..|++|.+...... ....+.+.+|+++++.++|+||+++++++...+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNL-----ETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSL   74 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEc-----CCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEE
Confidence            4888999999999999999876     35567999998766432 23456788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      +++|||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+.....   
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          75 YIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence            99999999999999998878899999999999999999999999999999999999999999999999998864322   


Q ss_pred             ----chhheeeccCcccc
Q 023430          268 ----CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ----~~~~~~~~ape~~~  281 (282)
                          ..++..|+|||.++
T Consensus       155 ~~~~~~~~~~y~~pe~~~  172 (254)
T cd06627         155 DDASVVGTPYWMAPEVIE  172 (254)
T ss_pred             cccccccchhhcCHhhhc
Confidence                25688899999763

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.96  E-value=3.7e-28  Score=205.27  Aligned_cols=166  Identities=20%  Similarity=0.326  Sum_probs=140.5

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      +++.+.||+|+||.||++.+..... .....+|+|++.....  ....+.+..|+.+++.++|+||+++++.+...+..+
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   77 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSG-EKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM   77 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCC-CCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE
Confidence            3567889999999999999874321 2347799999865432  224567889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-
Q 023430          192 LILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-  268 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-  268 (282)
                      ++|||+++++|.+++.....  +++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||++...... 
T Consensus        78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  157 (258)
T smart00219       78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD  157 (258)
T ss_pred             EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence            99999999999999876544  899999999999999999999999999999999999999999999999999643221 


Q ss_pred             -------hhheeeccCccc
Q 023430          269 -------FFFFLFLGGGVF  280 (282)
Q Consensus       269 -------~~~~~~~ape~~  280 (282)
                             .++..|+|||.+
T Consensus       158 ~~~~~~~~~~~~y~~Pe~~  176 (258)
T smart00219      158 YYKKKGGKLPIRWMAPESL  176 (258)
T ss_pred             ccccccCCCcccccChHHh
Confidence                   246789999976

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.96  E-value=1.3e-29  Score=209.97  Aligned_cols=169  Identities=23%  Similarity=0.345  Sum_probs=136.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe-C
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT-R  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~  187 (282)
                      ...|+++..||+|+||.||+|..+.+.+. ..+.+|||.++........ -....+|+.+++.++|+||+.+..+|.. +
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~k-r~k~yAiKkfk~~kd~tGi-S~SAcREiaL~REl~h~nvi~Lv~Vfl~~d  100 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDK-RTKEYAIKKFKGEKDGTGI-SMSACREIALLRELKHPNVISLVKVFLSHD  100 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcc-cchhhHHHHHhccCCCCCc-CHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence            35799999999999999999976655432 2457999998765322222 2335679999999999999999988877 7


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC----CcEEEEe
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD----GHVMAAH  258 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~----~~v~l~D  258 (282)
                      ..+|+++||.+. +|...++-+     +.++...+..++.||+.|+.|||++=|+||||||.|||+..+    |.|||+|
T Consensus       101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD  179 (438)
T KOG0666|consen  101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD  179 (438)
T ss_pred             ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence            799999999987 777777532     358889999999999999999999999999999999999888    9999999


Q ss_pred             cCcccc------cccc----hhheeeccCccc
Q 023430          259 SLNSHN------QLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~------~~~~----~~~~~~~ape~~  280 (282)
                      ||+++.      -+.+    .-|.-|-|||.|
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELL  211 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELL  211 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHh
Confidence            999962      1212    238899999975

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.96  E-value=6.8e-28  Score=206.77  Aligned_cols=171  Identities=16%  Similarity=0.235  Sum_probs=141.4

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||+|.+.... ......|++|.+....  .....+.+.+|+.+++.++|+||+++++++..
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~-~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~   79 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEK-PGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVCIE   79 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCC-CCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            34568999999999999999999987432 1235678999876432  33445668889999999999999999998765


Q ss_pred             -CCEEEEEEeccCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEE
Q 023430          187 -RSKLYLILDFINGGHLFFHLYRQ--------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       187 -~~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~  257 (282)
                       ....++++||+++++|..++...        ..+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+
T Consensus        80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~  159 (280)
T cd05043          80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKIT  159 (280)
T ss_pred             CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEEC
Confidence             56789999999999999988653        347899999999999999999999999999999999999999999999


Q ss_pred             ecCccccccc---------chhheeeccCccc
Q 023430          258 HSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      |||+++.-..         ..++..|||||.+
T Consensus       160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~  191 (280)
T cd05043         160 DNALSRDLFPMDYHCLGDNENRPVKWMALESL  191 (280)
T ss_pred             CCCCcccccCCceEEeCCCCCcchhccCHHHH
Confidence            9999864221         1346679999976

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=3.7e-28  Score=208.74  Aligned_cols=163  Identities=23%  Similarity=0.388  Sum_probs=138.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||.|+||.||+|+++     .++..||||++..... .....+.+.+|+++++.++||||+++++++...+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   74 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL   74 (284)
T ss_pred             CceeeeeecCCCceEEEEEEEC-----CCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcE
Confidence            4889999999999999999876     3567899998865432 222334678899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc---
Q 023430          191 YLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ---  265 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~---  265 (282)
                      ++||||+. ++|..++..  ...+++..+..++.|++.||+|||+++++||||||+||+++.++.++|+|||++...   
T Consensus        75 ~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~  153 (284)
T cd07860          75 YLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  153 (284)
T ss_pred             EEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            99999996 578887765  345889999999999999999999999999999999999999999999999988532   


Q ss_pred             ----ccchhheeeccCccc
Q 023430          266 ----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ----~~~~~~~~~~ape~~  280 (282)
                          ....++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~y~aPE~~  172 (284)
T cd07860         154 VRTYTHEVVTLWYRAPEIL  172 (284)
T ss_pred             ccccccccccccccCCeEE
Confidence                122457889999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.96  E-value=1e-27  Score=207.22  Aligned_cols=164  Identities=20%  Similarity=0.335  Sum_probs=135.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|.||.||+++++     ..+..||+|.+..... .....+.+.+|+.+++.++|+||+++++++.....
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   75 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDR-----VTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKR   75 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEec-----CCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCe
Confidence            57999999999999999999876     3567899998865432 12233557789999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~~~~  266 (282)
                      .|+||||+++ +|..++.....  +++..+..++.||+.||.|||+++|+||||||+||+++. ++.+||+|||++....
T Consensus        76 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009         76 LYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             EEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence            9999999964 77777755433  578888899999999999999999999999999999985 5679999999996432


Q ss_pred             -------cchhheeeccCccc
Q 023430          267 -------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -------~~~~~~~~~ape~~  280 (282)
                             ...+++.|+|||.+
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~  175 (294)
T PLN00009        155 IPVRTFTHEVVTLWYRAPEIL  175 (294)
T ss_pred             CCccccccCceeecccCHHHH
Confidence                   12457889999975

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.96  E-value=7.5e-28  Score=207.91  Aligned_cols=164  Identities=23%  Similarity=0.396  Sum_probs=135.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~  188 (282)
                      ++|++.+.||+|+||.||+|.+.     ..+..||+|++..... .......+.+|+.+++.+. |+||+++++++....
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~   74 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDK-----NTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEE   74 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEEC-----CCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecC
Confidence            46999999999999999999976     3567899998865432 2223345778999999995 699999999988766


Q ss_pred             E-----EEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEE
Q 023430          189 K-----LYLILDFINGGHLFFHLYRQ-----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAA  257 (282)
Q Consensus       189 ~-----~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~  257 (282)
                      .     .|++|||+++ +|..++...     ..+++..++.++.||+.||.|||+++|+||||||+||+++. ++.++|+
T Consensus        75 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~  153 (295)
T cd07837          75 KNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIA  153 (295)
T ss_pred             CCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEe
Confidence            5     8999999986 787777542     34789999999999999999999999999999999999998 8999999


Q ss_pred             ecCccccccc-------chhheeeccCccc
Q 023430          258 HSLNSHNQLC-------CFFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~~-------~~~~~~~~ape~~  280 (282)
                      |||++.....       ..+++.|+|||.+
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~  183 (295)
T cd07837         154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVL  183 (295)
T ss_pred             ecccceecCCCccccCCcccccCCCChHHh
Confidence            9999864321       2457889999975

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.96  E-value=1.3e-27  Score=208.67  Aligned_cols=163  Identities=19%  Similarity=0.282  Sum_probs=138.7

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |...+.||+|+||.||+|+..     ..+..|++|++...........+.+.+|+.+++.++|+||+++++++......|
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   97 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNS-----HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAW   97 (313)
T ss_pred             hhcceeeccCCCeEEEEEEEC-----CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence            666788999999999999875     356789999987654333444556788999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          192 LILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      +||||+.+ +|...+.. ...+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....   
T Consensus        98 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~  176 (313)
T cd06633          98 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANS  176 (313)
T ss_pred             EEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCC
Confidence            99999965 66666654 45689999999999999999999999999999999999999999999999999864322   


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      ..|+..|+|||.+
T Consensus       177 ~~~~~~y~aPE~~  189 (313)
T cd06633         177 FVGTPYWMAPEVI  189 (313)
T ss_pred             ccccccccChhhc
Confidence            2568899999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.96  E-value=1.3e-28  Score=210.96  Aligned_cols=163  Identities=21%  Similarity=0.388  Sum_probs=139.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|+..+.||+|+||.||+|.+.     ..+..||+|.+.....  ....+.+.+|+.+++.++|+||+++++.+......
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDN-----RTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKL   77 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEc-----CCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCce
Confidence            3666778999999999999875     3466799998865431  23446788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc--
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC--  268 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~--  268 (282)
                      |+||||+++++|.+++.. +.+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++++|||++......  
T Consensus        78 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06642          78 WIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence            999999999999888754 56889999999999999999999999999999999999999999999999998642221  


Q ss_pred             -----hhheeeccCcccc
Q 023430          269 -----FFFFLFLGGGVFN  281 (282)
Q Consensus       269 -----~~~~~~~ape~~~  281 (282)
                           .++..|+|||.++
T Consensus       157 ~~~~~~~~~~y~aPE~~~  174 (277)
T cd06642         157 KRNTFVGTPFWMAPEVIK  174 (277)
T ss_pred             hhhcccCcccccCHHHhC
Confidence                 4678899999864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.96  E-value=6.3e-28  Score=204.83  Aligned_cols=161  Identities=19%  Similarity=0.210  Sum_probs=130.8

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE-eCCEEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ-TRSKLYLIL  194 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lv~  194 (282)
                      +.||+|+||.||+|.+....  .....+|+|.+....  .....+.+.+|+.+++.++||||+++++++. .++..+++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~--~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   76 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSD--GQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVL   76 (262)
T ss_pred             CcccccCCceEEEEEEecCC--CceEEEEEEecCccC--CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEE
Confidence            36899999999999875321  244679999875422  2234456788999999999999999999765 455689999


Q ss_pred             eccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc------
Q 023430          195 DFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~------  267 (282)
                      ||+.+++|.+++.+. ....+..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||+++....      
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~  156 (262)
T cd05058          77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV  156 (262)
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence            999999999998764 3467778889999999999999999999999999999999999999999999864221      


Q ss_pred             -----chhheeeccCccc
Q 023430          268 -----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -----~~~~~~~~ape~~  280 (282)
                           ..++..|||||.+
T Consensus       157 ~~~~~~~~~~~y~aPE~~  174 (262)
T cd05058         157 HNHTGAKLPVKWMALESL  174 (262)
T ss_pred             cccccCcCCccccChhHh
Confidence                 1336689999976

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=6.6e-28  Score=213.16  Aligned_cols=164  Identities=21%  Similarity=0.335  Sum_probs=137.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||++...     ..+..||||++.... ......+.+.+|+.+|+.++|+||+++++++....
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDR-----RTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL   87 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEEC-----CCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence            568999999999999999999866     456789999886532 12223345778999999999999999999887543


Q ss_pred             ------EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 ------KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                            ..++||||+ +++|..++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++.++++|||++
T Consensus        88 ~~~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~  165 (343)
T cd07880          88 SLDRFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA  165 (343)
T ss_pred             cccccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence                  468999998 678877775 456899999999999999999999999999999999999999999999999999


Q ss_pred             cccccc----hhheeeccCccc
Q 023430          263 HNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~----~~~~~~~ape~~  280 (282)
                      ......    .+++.|||||.+
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~  187 (343)
T cd07880         166 RQTDSEMTGYVVTRWYRAPEVI  187 (343)
T ss_pred             cccccCccccccCCcccCHHHH
Confidence            743322    458899999975

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=1.8e-27  Score=205.08  Aligned_cols=164  Identities=23%  Similarity=0.311  Sum_probs=138.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--  187 (282)
                      ++|+..+.||.|++|.||++...     ..+..+|+|.+.....  ......+.+|+++++.++|+||+++++++...  
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   73 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLK-----NTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESS   73 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEEC-----CCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC
Confidence            47899999999999999999976     3567899999875432  23345688899999999999999999988653  


Q ss_pred             CEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +.+++||||+++++|.+++..    ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~  153 (287)
T cd06621          74 SSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSG  153 (287)
T ss_pred             CeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccc
Confidence            478999999999999887653    3457899999999999999999999999999999999999999999999999986


Q ss_pred             ccc-----cchhheeeccCccc
Q 023430          264 NQL-----CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~-----~~~~~~~~~ape~~  280 (282)
                      ...     ...++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~~~y~~pE~~  175 (287)
T cd06621         154 ELVNSLAGTFTGTSFYMAPERI  175 (287)
T ss_pred             cccccccccccCCccccCHHHh
Confidence            322     12458889999976

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.96  E-value=8.3e-28  Score=206.07  Aligned_cols=162  Identities=23%  Similarity=0.402  Sum_probs=140.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|+..+.||.|+||.||+|.+.     ..+..+|+|++.....  ....+.+.+|+.+++.++|+||+++++.+......
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDN-----RTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKL   77 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEc-----cCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEE
Confidence            5778889999999999999876     3467899998875432  23346688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      |+||||+++++|.+++.. +.+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++++|||++.....   
T Consensus        78 ~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          78 WIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence            999999999999998864 5688999999999999999999999999999999999999999999999999854221   


Q ss_pred             ----chhheeeccCccc
Q 023430          268 ----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ----~~~~~~~~ape~~  280 (282)
                          ..++..|+|||.+
T Consensus       157 ~~~~~~~~~~y~apE~~  173 (277)
T cd06640         157 KRNTFVGTPFWMAPEVI  173 (277)
T ss_pred             ccccccCcccccCHhHh
Confidence                1457789999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.96  E-value=1.1e-27  Score=205.22  Aligned_cols=162  Identities=22%  Similarity=0.398  Sum_probs=139.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      -|++.+.||+|+||.||++.+.     ..+..+|+|++.....  ....+.+.+|+.+++.++|+||+++++.+..+...
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~-----~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   77 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDN-----RTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL   77 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEEC-----CCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeE
Confidence            3777889999999999999865     3567899998764322  23345688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      |+||||+++++|..++.. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....   
T Consensus        78 ~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06641          78 WIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence            999999999999988854 4688999999999999999999999999999999999999999999999998853211   


Q ss_pred             ----chhheeeccCccc
Q 023430          268 ----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ----~~~~~~~~ape~~  280 (282)
                          ..++..|++||.+
T Consensus       157 ~~~~~~~~~~y~~PE~~  173 (277)
T cd06641         157 KRNTFVGTPFWMAPEVI  173 (277)
T ss_pred             hhccccCCccccChhhh
Confidence                1457889999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.96  E-value=1e-27  Score=204.67  Aligned_cols=158  Identities=25%  Similarity=0.353  Sum_probs=131.5

Q ss_pred             CeEEEeee--CcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC
Q 023430          111 DFEIFRVV--GQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR  187 (282)
Q Consensus       111 ~y~~~~~l--G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  187 (282)
                      +|++.+.+  |+|+||.||++..+     ..+..+|+|++.......        .|+.....+ +|+||+++++.+...
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~   81 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHK-----PTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTL   81 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEc-----CCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecC
Confidence            55665555  99999999999876     356779999986543211        122222222 699999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l~Dfg~s~~~~  266 (282)
                      +..|+||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||||+||+++.++ .++|+|||++....
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~  161 (267)
T PHA03390         82 KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG  161 (267)
T ss_pred             CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence            99999999999999999998877899999999999999999999999999999999999999998 99999999986543


Q ss_pred             cc---hhheeeccCcccc
Q 023430          267 CC---FFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~~---~~~~~~~ape~~~  281 (282)
                      ..   .++..|||||.+.
T Consensus       162 ~~~~~~~~~~y~aPE~~~  179 (267)
T PHA03390        162 TPSCYDGTLDYFSPEKIK  179 (267)
T ss_pred             CCccCCCCCcccChhhhc
Confidence            33   5689999999873

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.95  E-value=2.6e-28  Score=211.51  Aligned_cols=161  Identities=22%  Similarity=0.326  Sum_probs=137.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|+....||+|+||.||++...     ..+..||+|++.....   ...+.+.+|+.+++.++||||+++++.+..++..
T Consensus        22 ~~~~~~~ig~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~   93 (297)
T cd06659          22 LLENYIKIGEGSTGIVCIAREK-----HSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEEL   93 (297)
T ss_pred             hHHhhhhcCCCCceeEEEEEEc-----CCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeE
Confidence            3555567999999999999865     3567899999865432   2335577899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc----
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL----  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~----  266 (282)
                      |++|||+++++|..++.. ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++....    
T Consensus        94 ~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~  172 (297)
T cd06659          94 WVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP  172 (297)
T ss_pred             EEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence            999999999999887754 568999999999999999999999999999999999999999999999999985321    


Q ss_pred             ---cchhheeeccCccc
Q 023430          267 ---CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ---~~~~~~~~~ape~~  280 (282)
                         ...++..|+|||.+
T Consensus       173 ~~~~~~~~~~y~aPE~~  189 (297)
T cd06659         173 KRKSLVGTPYWMAPEVI  189 (297)
T ss_pred             cccceecCccccCHHHH
Confidence               12468899999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.95  E-value=8.6e-28  Score=208.79  Aligned_cols=165  Identities=22%  Similarity=0.306  Sum_probs=135.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+.+     .++..||||++...... ......+.+|+.+++.++||||+++++++....
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   84 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHK-----KTKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKA   84 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEEC-----CCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEeccc
Confidence            468999999999999999999976     35678999988654321 222234567999999999999999999876543


Q ss_pred             --------EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          189 --------KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       189 --------~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                              ..++||||+.+ +|...+... ..+++.++..++.|++.||.|||++|++|+||||+|||++.++.++|+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~df  163 (310)
T cd07865          85 TPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADF  163 (310)
T ss_pred             ccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcC
Confidence                    45999999975 777776554 36899999999999999999999999999999999999999999999999


Q ss_pred             Ccccccc-----------cchhheeeccCccc
Q 023430          260 LNSHNQL-----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~-----------~~~~~~~~~ape~~  280 (282)
                      |++....           ...++..|+|||.+
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  195 (310)
T cd07865         164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELL  195 (310)
T ss_pred             CCcccccCCcccCCCCccCcccCccccCcHHh
Confidence            9885321           12457789999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=5e-28  Score=213.38  Aligned_cols=164  Identities=14%  Similarity=0.320  Sum_probs=139.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--  187 (282)
                      .+|.+.+.||+|+||.||+++..     .++..||||.+..... .......+.+|+.+++.++|+||+++++++...  
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~   78 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNS-----ETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR   78 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEec-----CCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence            57999999999999999999876     4577899998865422 222334567899999999999999999887644  


Q ss_pred             ---CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          188 ---SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       188 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                         ...|+||||+. ++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++..
T Consensus        79 ~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  157 (337)
T cd07858          79 EAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART  157 (337)
T ss_pred             cccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence               35899999996 68888888778899999999999999999999999999999999999999999999999999975


Q ss_pred             cccc-------hhheeeccCccc
Q 023430          265 QLCC-------FFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~~-------~~~~~~~ape~~  280 (282)
                      ....       .++..|+|||.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~  180 (337)
T cd07858         158 TSEKGDFMTEYVVTRWYRAPELL  180 (337)
T ss_pred             cCCCcccccccccccCccChHHH
Confidence            3322       467889999975

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.95  E-value=1.2e-27  Score=206.94  Aligned_cols=163  Identities=23%  Similarity=0.326  Sum_probs=139.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||++...     ..+..|++|.+....   ....+.+.+|+.+++.++||||+++++.+...+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~   89 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDV-----ATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGD   89 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEc-----CCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCC
Confidence            358999999999999999999865     345679999885432   223356788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+|+||+++++|.+++.+. .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++....  
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~  168 (293)
T cd06647          90 ELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  168 (293)
T ss_pred             cEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence            999999999999999988653 57889999999999999999999999999999999999999999999999875321  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...++..|++||.+
T Consensus       169 ~~~~~~~~~~~~y~~PE~~  187 (293)
T cd06647         169 QSKRSTMVGTPYWMAPEVV  187 (293)
T ss_pred             ccccccccCChhhcCchhh
Confidence                 12467789999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.95  E-value=5.9e-28  Score=212.81  Aligned_cols=162  Identities=16%  Similarity=0.298  Sum_probs=135.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--  187 (282)
                      ++|++.+.||+|+||.||+|.++     .++..||+|++....  .......+.+|+.+++.++|+||+++++++...  
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   77 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHK-----PTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSF   77 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEc-----CCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccc
Confidence            58999999999999999999876     356789999886422  223345577899999999999999999876543  


Q ss_pred             ---CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          188 ---SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       188 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                         ...|++|||+.+ +|..++. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus        78 ~~~~~~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          78 ESFNDVYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             cccceEEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceee
Confidence               358999999975 7777664 45689999999999999999999999999999999999999999999999999864


Q ss_pred             ccc----------chhheeeccCccc
Q 023430          265 QLC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~----------~~~~~~~~ape~~  280 (282)
                      ...          ..++..|||||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (336)
T cd07849         156 ADPEHDHTGFLTEYVATRWYRAPEIM  181 (336)
T ss_pred             ccccccccCCcCCcCcCCCccChHHh
Confidence            321          2467889999974

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.95  E-value=8.8e-28  Score=209.16  Aligned_cols=166  Identities=22%  Similarity=0.335  Sum_probs=137.6

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+|.++     .++..||+|++....... .....+.+|+.+++.++|+||+++++++...
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~-----~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDT-----TSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGK   78 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEEC-----CCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecC
Confidence            3568999999999999999999976     356789999987543221 2222355799999999999999999998754


Q ss_pred             --CEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          188 --SKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       188 --~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                        +.+++||||+.+ +|..++.. ...+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..
T Consensus        79 ~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~  157 (309)
T cd07845          79 HLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLART  157 (309)
T ss_pred             CCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeee
Confidence              568999999975 77777765 35689999999999999999999999999999999999999999999999999864


Q ss_pred             ccc-------chhheeeccCccc
Q 023430          265 QLC-------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~-------~~~~~~~~ape~~  280 (282)
                      ...       ..++..|+|||.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~  180 (309)
T cd07845         158 YGLPAKPMTPKVVTLWYRAPELL  180 (309)
T ss_pred             cCCccCCCCcccccccccChhhh
Confidence            322       1347789999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.95  E-value=3.5e-28  Score=214.06  Aligned_cols=164  Identities=18%  Similarity=0.310  Sum_probs=139.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe---
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT---  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---  186 (282)
                      ++|++.+.||+|+||.||++..+     .++..||+|++..... .....+.+.+|+.+|+.++|+||+++++++..   
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   78 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDT-----RSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA   78 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEc-----CCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence            58999999999999999999876     4567899999875432 22334567789999999999999999988753   


Q ss_pred             -CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 -RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                       ...+++||||+. ++|..++...+.+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++...
T Consensus        79 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          79 DFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             CCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence             357899999996 588888877777999999999999999999999999999999999999999999999999998542


Q ss_pred             cc-----------chhheeeccCccc
Q 023430          266 LC-----------CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~-----------~~~~~~~~ape~~  280 (282)
                      ..           ..++..|+|||.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~  183 (334)
T cd07855         158 SSSPTEHKYFMTEYVATRWYRAPELL  183 (334)
T ss_pred             cccCcCCCcccccccccccccChHHh
Confidence            21           2567889999975

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.95  E-value=1.3e-27  Score=205.16  Aligned_cols=163  Identities=25%  Similarity=0.401  Sum_probs=137.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEe-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQT-  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~-  186 (282)
                      .+.|++.+.||+|+||.||++.++     ..+..+|+|++....    .....+..|+.+++.+ +|+||+++++++.. 
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEc-----CCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            457999999999999999999976     356689999886542    2234577899999988 69999999998853 


Q ss_pred             -----CCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          187 -----RSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       187 -----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                           ....|++|||+++|+|..++...  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+||
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~df  165 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDF  165 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence                 45789999999999999888653  34788889999999999999999999999999999999999999999999


Q ss_pred             Ccccccc-------cchhheeeccCccc
Q 023430          260 LNSHNQL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~-------~~~~~~~~~ape~~  280 (282)
                      |++....       ...++..|+|||.+
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~y~aPE~l  193 (282)
T cd06636         166 GVSAQLDRTVGRRNTFIGTPYWMAPEVI  193 (282)
T ss_pred             cchhhhhccccCCCcccccccccCHhhc
Confidence            9986321       12568899999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.95  E-value=1.1e-27  Score=205.76  Aligned_cols=162  Identities=22%  Similarity=0.373  Sum_probs=138.5

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |++.+.||+|++|.||+|.++     ..+..||+|++..... .....+.+.+|+.+++.++|+||+++++++...+..|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~   74 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDK-----LTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLY   74 (283)
T ss_pred             CchheEecCCCCeEEEEEEEc-----CCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEE
Confidence            567889999999999999976     3567899999875532 2223345778999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc----
Q 023430          192 LILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ----  265 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~----  265 (282)
                      ++|||++ ++|..++....  .+++..+..++.|++.||.|||+++++||||+|+||+++.++.++|+|||++...    
T Consensus        75 iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~  153 (283)
T cd07835          75 LVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV  153 (283)
T ss_pred             EEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence            9999995 58988887655  6899999999999999999999999999999999999999999999999998632    


Q ss_pred             ---ccchhheeeccCccc
Q 023430          266 ---LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ---~~~~~~~~~~ape~~  280 (282)
                         ....++..|||||.+
T Consensus       154 ~~~~~~~~~~~~~aPE~~  171 (283)
T cd07835         154 RTYTHEVVTLWYRAPEIL  171 (283)
T ss_pred             cccCccccccCCCCCcee
Confidence               122457889999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.95  E-value=1.7e-27  Score=204.47  Aligned_cols=162  Identities=24%  Similarity=0.427  Sum_probs=138.4

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--CE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--SK  189 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~  189 (282)
                      |++.+.||+|+||.||+|.+.     ..+..+|+|.+.... ......+.+.+|+.+++.++|+||+++++++...  +.
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~-----~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   74 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNK-----KTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS   74 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEEC-----CCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCc
Confidence            678899999999999999976     346789999998654 2233345577899999999999999999999887  89


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .++||||+++ +|..++... ..+++..+..++.|++.||.|||++|++|+||||+||++++++.++|+|||++..... 
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          75 IYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             EEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            9999999975 888877654 5689999999999999999999999999999999999999999999999998864322 


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~y~~PE~~  173 (287)
T cd07840         154 NSADYTNRVITLWYRPPELL  173 (287)
T ss_pred             CcccccccccccccCCceee
Confidence                   2447789999965

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.95  E-value=2.4e-28  Score=196.62  Aligned_cols=168  Identities=24%  Similarity=0.333  Sum_probs=141.9

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+...+|.+.+.||+|+|+-||+++..     .+++.||+|++....   .+..+...+|++..++++||||++++++..
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~-----s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l   88 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGL-----STGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQL   88 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeeccc-----Ccccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHH
Confidence            455678999999999999999999865     467789999987653   344566788999999999999999977653


Q ss_pred             e-----CCEEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcCCCcE
Q 023430          186 T-----RSKLYLILDFINGGHLFFHLYRQ----GIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDSDGHV  254 (282)
Q Consensus       186 ~-----~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~~~~v  254 (282)
                      .     ....||++.|...|+|.+.+.+.    ..+++.+++.|+.++++||++||+..  ..||||||.|||+.+++..
T Consensus        89 ~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~  168 (302)
T KOG2345|consen   89 REEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLP  168 (302)
T ss_pred             HhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCce
Confidence            3     33599999999999999888652    35899999999999999999999998  9999999999999999999


Q ss_pred             EEEecCcccc------------cccc----hhheeeccCcccc
Q 023430          255 MAAHSLNSHN------------QLCC----FFFFLFLGGGVFN  281 (282)
Q Consensus       255 ~l~Dfg~s~~------------~~~~----~~~~~~~ape~~~  281 (282)
                      ++.|||.+..            .+.+    .-|..|-|||.||
T Consensus       169 vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~  211 (302)
T KOG2345|consen  169 VLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFN  211 (302)
T ss_pred             EEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchhee
Confidence            9999998741            1122    3399999999986

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.95  E-value=3.2e-27  Score=199.27  Aligned_cols=164  Identities=28%  Similarity=0.476  Sum_probs=142.7

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||++.+.     ..+..+++|++..... .....+.+.+|+++++.++|+|++++.+.+......
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~   74 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRK-----SDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKL   74 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEc-----CCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEE
Confidence            5889999999999999999976     3567899999876542 234455688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          191 YLILDFINGGHLFFHLYRQ----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ++++||+++++|.+++...    ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  154 (258)
T cd08215          75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLS  154 (258)
T ss_pred             EEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecc
Confidence            9999999999999988764    668999999999999999999999999999999999999999999999999886422


Q ss_pred             cc-------hhheeeccCccc
Q 023430          267 CC-------FFFFLFLGGGVF  280 (282)
Q Consensus       267 ~~-------~~~~~~~ape~~  280 (282)
                      ..       .+++.|+|||.+
T Consensus       155 ~~~~~~~~~~~~~~y~~pe~~  175 (258)
T cd08215         155 STVDLAKTVVGTPYYLSPELC  175 (258)
T ss_pred             cCcceecceeeeecccChhHh
Confidence            21       468889999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.95  E-value=9.1e-28  Score=208.07  Aligned_cols=165  Identities=23%  Similarity=0.389  Sum_probs=137.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.++     ..+..||+|+++.... .......+.+|+.+++.++||||+++++++....
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~   79 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDK-----DTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQ   79 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEEC-----CCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence            468999999999999999999987     3456899999875432 1222345678999999999999999999887654


Q ss_pred             ----------EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEE
Q 023430          189 ----------KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       189 ----------~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~  257 (282)
                                .+++|+||+++ ++...+... ..+++..++.++.|++.||.|||+.||+||||||+||++++++.++|+
T Consensus        80 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~  158 (302)
T cd07864          80 DALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLA  158 (302)
T ss_pred             hhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeC
Confidence                      79999999987 666666543 468999999999999999999999999999999999999999999999


Q ss_pred             ecCcccccccc--------hhheeeccCccc
Q 023430          258 HSLNSHNQLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~~~--------~~~~~~~ape~~  280 (282)
                      |||++......        .++..|+|||.+
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~  189 (302)
T cd07864         159 DFGLARLYNSEESRPYTNKVITLWYRPPELL  189 (302)
T ss_pred             cccccccccCCcccccccceeccCccChHHh
Confidence            99998743321        347789999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.95  E-value=1.6e-27  Score=201.46  Aligned_cols=164  Identities=27%  Similarity=0.473  Sum_probs=139.8

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||++..+     ..+..+|+|.+...... ....+.+.+|+.+++.++|+||+++++.+......
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~   74 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAK-----SDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRL   74 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEc-----CCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeE
Confidence            5889999999999999999976     34567999998765332 22345678899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc-EEEEecCccccccc
Q 023430          191 YLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH-VMAAHSLNSHNQLC  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~-v~l~Dfg~s~~~~~  267 (282)
                      ++++||+++++|.+++.+..  .+++..+..++.|++.||.|||+++++|+||||+||++++++. ++++|||.+.....
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          75 FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence            99999999999999887643  4789999999999999999999999999999999999998865 69999998853211


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..|+..|+|||.+
T Consensus       155 ~~~~~~~~~~~~~~~ape~~  174 (257)
T cd08225         155 SMELAYTCVGTPYYLSPEIC  174 (257)
T ss_pred             CcccccccCCCccccCHHHH
Confidence                   2468889999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.4e-27  Score=200.03  Aligned_cols=158  Identities=20%  Similarity=0.288  Sum_probs=134.2

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      ++||+|+||.||++...     . ++.|++|++......  .....+.+|+.+++.++|+||+++++++......++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~-----~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   72 (251)
T cd05041           1 EKIGKGNFGDVYKGVLK-----G-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVME   72 (251)
T ss_pred             CccccCCCceEEEEEEe-----C-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEE
Confidence            36899999999999865     2 667999988765322  344568889999999999999999999999999999999


Q ss_pred             ccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-----c-
Q 023430          196 FINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-----C-  268 (282)
Q Consensus       196 ~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-----~-  268 (282)
                      |+.+++|.+++... ..+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||++.....     . 
T Consensus        73 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  152 (251)
T cd05041          73 LVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD  152 (251)
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence            99999999988653 4578899999999999999999999999999999999999999999999999864321     1 


Q ss_pred             ---hhheeeccCcccc
Q 023430          269 ---FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ---~~~~~~~ape~~~  281 (282)
                         .++..|+|||.+.
T Consensus       153 ~~~~~~~~y~~PE~~~  168 (251)
T cd05041         153 GLKQIPIKWTAPEALN  168 (251)
T ss_pred             ccCcceeccCChHhhc
Confidence               1245699999763

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.95  E-value=2.6e-27  Score=209.51  Aligned_cols=164  Identities=20%  Similarity=0.290  Sum_probs=136.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++.+.||+|+||.||++...     .++..||+|++.+... .....+.+.+|+.+++.++|+||+++++++... 
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~   89 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   89 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEc-----CCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence            478999999999999999999865     3567899999875422 222345577899999999999999999887643 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                           ...|++++++ +++|..++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++
T Consensus        90 ~~~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~  167 (345)
T cd07877          90 SLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA  167 (345)
T ss_pred             cccccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccc
Confidence                 3478888887 6788777654 46899999999999999999999999999999999999999999999999998


Q ss_pred             cccccc----hhheeeccCccc
Q 023430          263 HNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~----~~~~~~~ape~~  280 (282)
                      ......    .++..|+|||.+
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~  189 (345)
T cd07877         168 RHTDDEMTGYVATRWYRAPEIM  189 (345)
T ss_pred             ccccccccccccCCCccCHHHH
Confidence            743322    568889999975

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.1e-27  Score=200.03  Aligned_cols=158  Identities=48%  Similarity=0.805  Sum_probs=140.3

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEecc
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFI  197 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  197 (282)
                      ||+|+||.||++.+.     ..+..+++|++.+...........+..|+.+++.++|+||+++++.+..+...+++|||+
T Consensus         1 lg~G~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKK-----DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEEC-----CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC
Confidence            699999999999876     346789999988765544445667889999999999999999999999999999999999


Q ss_pred             CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-------cchh
Q 023430          198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-------CCFF  270 (282)
Q Consensus       198 ~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-------~~~~  270 (282)
                      ++++|.+++.....+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||.+....       ...+
T Consensus        76 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  155 (250)
T cd05123          76 PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG  155 (250)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcC
Confidence            999999999887788999999999999999999999999999999999999999999999999986432       2256


Q ss_pred             heeeccCccc
Q 023430          271 FFLFLGGGVF  280 (282)
Q Consensus       271 ~~~~~ape~~  280 (282)
                      +..|++||.+
T Consensus       156 ~~~~~~Pe~~  165 (250)
T cd05123         156 TPEYLAPEVL  165 (250)
T ss_pred             CccccChHHh
Confidence            8899999975

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.95  E-value=1e-27  Score=210.54  Aligned_cols=159  Identities=18%  Similarity=0.241  Sum_probs=132.7

Q ss_pred             eeeCcC--CCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Q 023430          116 RVVGQG--AFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       116 ~~lG~G--~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  193 (282)
                      ..||+|  +||+||++++.     ..+..||+|++...... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus         4 ~~ig~g~~~~~~v~~a~~~-----~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v   77 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHT-----PTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVI   77 (328)
T ss_pred             HHhCCcccCceeEEEEEEc-----CCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEE
Confidence            346666  99999999876     46778999998754322 23456788999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc----
Q 023430          194 LDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC----  267 (282)
Q Consensus       194 ~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~----  267 (282)
                      |||+.+++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++++||+.+.....    
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~  157 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK  157 (328)
T ss_pred             EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence            9999999999888764  3488999999999999999999999999999999999999999999999975432111    


Q ss_pred             -----c-----hhheeeccCccc
Q 023430          268 -----C-----FFFFLFLGGGVF  280 (282)
Q Consensus       268 -----~-----~~~~~~~ape~~  280 (282)
                           +     .++..|||||++
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~  180 (328)
T cd08226         158 AKVVYDFPQFSTSVLPWLSPELL  180 (328)
T ss_pred             ccccccccccccCccCccChhhh
Confidence                 1     224569999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.95  E-value=5.3e-27  Score=197.06  Aligned_cols=163  Identities=29%  Similarity=0.462  Sum_probs=143.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|++|.||++.+.     ..+..+++|++.....   ...+.+.+|+.+++.++|+||+++++.+......
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   72 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHK-----RTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDEL   72 (253)
T ss_pred             CceeeeeeccCCceEEEEEEEC-----CCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence            4888999999999999999976     3567799999876542   3456688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      ++++||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+....   
T Consensus        73 ~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  152 (253)
T cd05122          73 WIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK  152 (253)
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence            9999999999999988775 578999999999999999999999999999999999999999999999999886432   


Q ss_pred             ---cchhheeeccCcccc
Q 023430          267 ---CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ---~~~~~~~~~ape~~~  281 (282)
                         ...++..|++||.+.
T Consensus       153 ~~~~~~~~~~~~~PE~~~  170 (253)
T cd05122         153 ARNTMVGTPYWMAPEVIN  170 (253)
T ss_pred             cccceecCCcccCHHHHc
Confidence               235688999999763

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.95  E-value=5.6e-27  Score=197.67  Aligned_cols=165  Identities=29%  Similarity=0.407  Sum_probs=144.7

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--C
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--S  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~  188 (282)
                      +|.+.+.||+|++|.||+|..+     ..+..+++|++...... ....+.+.+|+.++++++|+||+++++.+...  .
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDK-----DTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKN   74 (260)
T ss_pred             CceeeeEeeecCceEEEEEEEC-----CCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCC
Confidence            4788899999999999999876     35678999998765422 34566788999999999999999999999988  8


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc---
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ---  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~---  265 (282)
                      ..+++|||+++++|.+++.....+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||.+...   
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          75 TLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            99999999999999999988778999999999999999999999999999999999999999999999999988532   


Q ss_pred             ------ccchhheeeccCcccc
Q 023430          266 ------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ------~~~~~~~~~~ape~~~  281 (282)
                            ....++..|++||.+.
T Consensus       155 ~~~~~~~~~~~~~~y~~pE~~~  176 (260)
T cd06606         155 ETGEGTGSVRGTPYWMAPEVIR  176 (260)
T ss_pred             cccccccCCCCCccccCHhhhc
Confidence                  2235689999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.95  E-value=5.2e-28  Score=199.56  Aligned_cols=159  Identities=28%  Similarity=0.421  Sum_probs=132.4

Q ss_pred             CCCeEEE-eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEe
Q 023430          109 PGDFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQT  186 (282)
Q Consensus       109 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~  186 (282)
                      .++|.+. ++||-|-.|.|..|.++     .++..+|+|++....        ..++|+++--.. .|||||.++++|..
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k-----~T~ekfALKvL~Ds~--------KARrEVeLHw~~s~h~~iV~IidVyeN  126 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHK-----RTQEKFALKVLLDSP--------KARREVELHWMASGHPHIVSIIDVYEN  126 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEec-----cchhhhHHHHHhcCH--------HHHhHhhhhhhhcCCCceEEeehhhhh
Confidence            4567765 68999999999999988     456679999885332        245688775444 59999999988764


Q ss_pred             ----CCEEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEEE
Q 023430          187 ----RSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMAA  257 (282)
Q Consensus       187 ----~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l~  257 (282)
                          ...+.+|||.|+||.|+..+..++.  |+|.++..|++||+.|+.|||+.+|.||||||+|+|....   ..+||+
T Consensus       127 s~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLt  206 (400)
T KOG0604|consen  127 SYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLT  206 (400)
T ss_pred             hccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEec
Confidence                4578899999999999999987755  9999999999999999999999999999999999999754   569999


Q ss_pred             ecCcccccc--cc----hhheeeccCccc
Q 023430          258 HSLNSHNQL--CC----FFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~--~~----~~~~~~~ape~~  280 (282)
                      |||+++...  .+    .+|+-|.|||++
T Consensus       207 DfGFAK~t~~~~~L~TPc~TPyYvaPevl  235 (400)
T KOG0604|consen  207 DFGFAKETQEPGDLMTPCFTPYYVAPEVL  235 (400)
T ss_pred             ccccccccCCCccccCCcccccccCHHHh
Confidence            999998543  12    679999999987

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.95  E-value=3.9e-27  Score=202.91  Aligned_cols=161  Identities=24%  Similarity=0.349  Sum_probs=138.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|...+.||+|++|.||++.+.     ..+..+++|++....   ....+.+.+|+.+++.++|+||+++++++...+..
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~   91 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDK-----STGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDEL   91 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEEC-----CCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeE
Confidence            4555679999999999999876     345679999875432   22345578899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      ++++||+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+.....   
T Consensus        92 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~  170 (285)
T cd06648          92 WVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP  170 (285)
T ss_pred             EEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence            999999999999998876 5689999999999999999999999999999999999999999999999998753221   


Q ss_pred             ----chhheeeccCccc
Q 023430          268 ----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ----~~~~~~~~ape~~  280 (282)
                          ..|+..|+|||.+
T Consensus       171 ~~~~~~~~~~y~aPE~~  187 (285)
T cd06648         171 RRKSLVGTPYWMAPEVI  187 (285)
T ss_pred             ccccccCCccccCHHHh
Confidence                2468899999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=3.6e-28  Score=214.52  Aligned_cols=165  Identities=25%  Similarity=0.313  Sum_probs=138.4

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQ  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~  185 (282)
                      +....|+++++||+|+.+.||++..-      ....||+|.+.... .+...+..+.+|+.+|.+|+ |.+||+||++-.
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s------~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv  430 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNS------DKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV  430 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecC------CCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence            34457999999999999999999743      34568888765443 34566778999999999997 999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .++.+||||||- ..+|..+|.+... ++...++.+..|++.++.++|..||||.||||.|+|+ -.|.+||+|||+|..
T Consensus       431 ~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~a  508 (677)
T KOG0596|consen  431 TDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANA  508 (677)
T ss_pred             cCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcc
Confidence            999999999965 4589888877654 3335788999999999999999999999999999998 479999999999964


Q ss_pred             cccc---------hhheeeccCccc
Q 023430          265 QLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~~---------~~~~~~~ape~~  280 (282)
                      .-.|         .||+-||+||+|
T Consensus       509 I~~DTTsI~kdsQvGT~NYMsPEAl  533 (677)
T KOG0596|consen  509 IQPDTTSIVKDSQVGTVNYMSPEAL  533 (677)
T ss_pred             cCccccceeeccccCcccccCHHHH
Confidence            3222         899999999997

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.95  E-value=3.3e-27  Score=202.40  Aligned_cols=160  Identities=23%  Similarity=0.426  Sum_probs=132.4

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeC--C
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTR--S  188 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~  188 (282)
                      |++.+.||+|+||.||++..+     ..+..||+|++..... ..... ...+|+.+++++. |+||+++++++.+.  +
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~-----~~~~~~aik~~~~~~~-~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   73 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSR-----KTGKYYAIKCMKKHFK-SLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRKTG   73 (282)
T ss_pred             CceEeeccccccceEEEEEEc-----CCCcEEEEEEehhccC-Cchhh-hHHHHHHHHhhcCCCCCccceEEEEecCCCC
Confidence            678899999999999999876     3567899998865432 11222 2346888888885 99999999999987  8


Q ss_pred             EEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      .+++||||+++ +|.+.+.. ...+++..+..++.|++.||.|||++||+||||||+||+++. +.++|+|||++.....
T Consensus        74 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~  151 (282)
T cd07831          74 RLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS  151 (282)
T ss_pred             cEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence            89999999975 77777765 356899999999999999999999999999999999999999 9999999999964321


Q ss_pred             ------chhheeeccCccc
Q 023430          268 ------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ------~~~~~~~~ape~~  280 (282)
                            ..++..|+|||.+
T Consensus       152 ~~~~~~~~~~~~y~aPE~~  170 (282)
T cd07831         152 KPPYTEYISTRWYRAPECL  170 (282)
T ss_pred             CCCcCCCCCCcccCChhHh
Confidence                  1458899999975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.95  E-value=2.1e-27  Score=209.13  Aligned_cols=165  Identities=21%  Similarity=0.226  Sum_probs=137.5

Q ss_pred             CCeE-EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhh-----------HHHHHHHHHHHHHhcCCCCe
Q 023430          110 GDFE-IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN-----------HVDYMKAERDILTKVTHPFI  177 (282)
Q Consensus       110 ~~y~-~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~nI  177 (282)
                      ++|. +.+.||+|+||.||+|.++     ..+..||+|++.........           ....+.+|+.+++.++|+||
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   82 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDT-----LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI   82 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEEC-----CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce
Confidence            3565 4577999999999999876     35678999998654322100           01236689999999999999


Q ss_pred             eeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEE
Q 023430          178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       178 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~  257 (282)
                      +++++++...+..++||||+. ++|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+
T Consensus        83 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~  161 (335)
T PTZ00024         83 MGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIA  161 (335)
T ss_pred             eeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEEC
Confidence            999999999999999999997 5898888877789999999999999999999999999999999999999999999999


Q ss_pred             ecCcccccc---------------------cchhheeeccCccc
Q 023430          258 HSLNSHNQL---------------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~---------------------~~~~~~~~~ape~~  280 (282)
                      |||++....                     ...++..|+|||.+
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  205 (335)
T PTZ00024        162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELL  205 (335)
T ss_pred             CccceeecccccccccccccccccccccccccccccCCCCChhc
Confidence            999886433                     11347789999976

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.95  E-value=1.4e-27  Score=210.52  Aligned_cols=164  Identities=22%  Similarity=0.375  Sum_probs=136.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  187 (282)
                      .++|++.+.||+|+||.||+|.+.     ..+..+|+|.+..... .......+.+|+.+++.+ +|+||+++++++...
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~   79 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDR-----RTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE   79 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEc-----CCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence            357999999999999999999876     3567899998854321 222334567899999999 999999999988653


Q ss_pred             --CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 --SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                        ...|+||||+++ +|..++... .+.+..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        80 ~~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          80 NDKDIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSL  157 (337)
T ss_pred             CCceEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence              368999999974 888888655 7888999999999999999999999999999999999999999999999988632


Q ss_pred             ccc------------hhheeeccCccc
Q 023430          266 LCC------------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~------------~~~~~~~ape~~  280 (282)
                      ...            .|+..|||||.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~  184 (337)
T cd07852         158 SELEENPENPVLTDYVATRWYRAPEIL  184 (337)
T ss_pred             ccccccccCcchhcccccccccCceee
Confidence            211            457889999976

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.95  E-value=5.9e-27  Score=201.63  Aligned_cols=164  Identities=23%  Similarity=0.352  Sum_probs=143.1

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..+.|+..+.||+|+||.||++.+.     ..+..+++|++.....    ..+.+.+|+++++.++|+||+++++.+...
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   87 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDR-----ATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVG   87 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEc-----cCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC
Confidence            3456888999999999999999876     3466799999875432    345578899999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ...|+++||+++++|.+++.... .+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++....
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614          88 DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence            99999999999999999998766 78999999999999999999999999999999999999999999999999875322


Q ss_pred             c-------chhheeeccCccc
Q 023430          267 C-------CFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~-------~~~~~~~~ape~~  280 (282)
                      .       -.++..|++||.+
T Consensus       168 ~~~~~~~~~~~~~~y~~PE~~  188 (286)
T cd06614         168 KEKSKRNSVVGTPYWMAPEVI  188 (286)
T ss_pred             cchhhhccccCCcccCCHhHh
Confidence            1       1467889999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.3e-27  Score=209.90  Aligned_cols=163  Identities=19%  Similarity=0.313  Sum_probs=139.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS--  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--  188 (282)
                      +|++.+.||+|+||.||+|++.     ..+..||+|++..... .....+.+.+|+.+++.++|+||+++++++....  
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDK-----RTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPE   74 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeC-----CCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc
Confidence            5889999999999999999976     3467899998875431 2334456888999999999999999999987765  


Q ss_pred             ---EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          189 ---KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                         .+|++|||+++ +|..++.+...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        75 ~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          75 DFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             cccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence               78999999984 78888877778999999999999999999999999999999999999999999999999998642


Q ss_pred             cc----------chhheeeccCccc
Q 023430          266 LC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~----------~~~~~~~~ape~~  280 (282)
                      ..          ..++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~  178 (330)
T cd07834         154 DPDEDEKGFLTEYVVTRWYRAPELL  178 (330)
T ss_pred             cccccccccccccccccCcCCceee
Confidence            21          1458889999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.95  E-value=3.6e-27  Score=199.14  Aligned_cols=164  Identities=23%  Similarity=0.382  Sum_probs=141.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +|++.+.||+|+||.||+++++     ..+..+++|.+...... ......+.+|+.+++.++|+||+++++.+......
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRL-----SDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKL   74 (256)
T ss_pred             CceEeeeecCCCceeEEEEEEC-----CCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEE
Confidence            4889999999999999999876     35678999998765432 23345677899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          191 YLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      |+||||+++++|..++.+    ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++++|||++....
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~  154 (256)
T cd08530          75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLK  154 (256)
T ss_pred             EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhc
Confidence            999999999999988865    3458899999999999999999999999999999999999999999999999886332


Q ss_pred             c-----chhheeeccCccc
Q 023430          267 C-----CFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~-----~~~~~~~~ape~~  280 (282)
                      .     ..++..|++||.+
T Consensus       155 ~~~~~~~~~~~~~~~Pe~~  173 (256)
T cd08530         155 KNMAKTQIGTPHYMAPEVW  173 (256)
T ss_pred             cCCcccccCCccccCHHHH
Confidence            2     3568899999976

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.95  E-value=4.1e-27  Score=207.08  Aligned_cols=165  Identities=19%  Similarity=0.257  Sum_probs=134.8

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC--
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR--  187 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~--  187 (282)
                      +|++.+.||+|+||.||++.....   ..+..||+|++.... ......+.+.+|+.+++.+ +|+||+++++.+...  
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~---~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   76 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAET---SEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPG   76 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCC---CcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccc
Confidence            488999999999999999997632   125679999886432 1222345577899999999 599999998865432  


Q ss_pred             --CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 --SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                        ..+|++|||+. ++|...+.....+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        77 ~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~  155 (332)
T cd07857          77 NFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGF  155 (332)
T ss_pred             cCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence              45789999986 588888877778999999999999999999999999999999999999999999999999998632


Q ss_pred             c----------c-chhheeeccCccc
Q 023430          266 L----------C-CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~----------~-~~~~~~~~ape~~  280 (282)
                      .          . -.|+..|+|||.+
T Consensus       156 ~~~~~~~~~~~~~~~g~~~y~aPE~~  181 (332)
T cd07857         156 SENPGENAGFMTEYVATRWYRAPEIM  181 (332)
T ss_pred             ccccccccccccCcccCccccCcHHH
Confidence            1          0 1468899999975

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-28  Score=221.98  Aligned_cols=171  Identities=20%  Similarity=0.276  Sum_probs=146.0

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      |..+...+.++||+|.||+|++|.|...  +.....||||.++.+....  ....|.+|+.+|.+|+|+|+++|||...+
T Consensus       107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~p--sgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~  182 (1039)
T KOG0199|consen  107 IPEEQIKLYELLGEGSFGVVKRGTWTQP--SGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD  182 (1039)
T ss_pred             ccHHHHHHHHHhcCcceeeEeeccccCC--CCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc
Confidence            4445677778999999999999999863  2345569999998765432  56779999999999999999999999987


Q ss_pred             CCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                       ..+.||||+++.|+|.+.|.+  +..|.......|+.||+.||.||..+++|||||..+|+||.....|||+|||+.+.
T Consensus       183 -qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRa  261 (1039)
T KOG0199|consen  183 -QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRA  261 (1039)
T ss_pred             -chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceec
Confidence             568899999999999999987  34578888899999999999999999999999999999999999999999999985


Q ss_pred             --cccchh--------heeeccCccccC
Q 023430          265 --QLCCFF--------FFLFLGGGVFNF  282 (282)
Q Consensus       265 --~~~~~~--------~~~~~ape~~~~  282 (282)
                        +..|.|        -+.|-|||.|+|
T Consensus       262 Lg~ned~Yvm~p~rkvPfAWCaPEsLrh  289 (1039)
T KOG0199|consen  262 LGENEDMYVMAPQRKVPFAWCAPESLRH  289 (1039)
T ss_pred             cCCCCcceEecCCCcCcccccCHhHhcc
Confidence              333433        568999999875

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.95  E-value=2.4e-27  Score=206.48  Aligned_cols=164  Identities=21%  Similarity=0.276  Sum_probs=137.8

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|+..+.||+|+||.||+++.+     ..+..+++|.+...........+.+.+|+.+++.++|+|++++++++......
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   90 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA   90 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEc-----CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCee
Confidence            4777788999999999999976     34677999988654333333445677899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          191 YLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      |+||||+. |++...+.. ...+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||++....   
T Consensus        91 ~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  169 (308)
T cd06634          91 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN  169 (308)
T ss_pred             EEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcc
Confidence            99999997 477666643 4558999999999999999999999999999999999999999999999999886422   


Q ss_pred             cchhheeeccCccc
Q 023430          267 CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~~~~~~~~~ape~~  280 (282)
                      ...++..|+|||.+
T Consensus       170 ~~~~~~~y~aPE~~  183 (308)
T cd06634         170 XFVGTPYWMAPEVI  183 (308)
T ss_pred             cccCCccccCHHHH
Confidence            22568899999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.95  E-value=1.7e-27  Score=202.95  Aligned_cols=162  Identities=20%  Similarity=0.303  Sum_probs=133.4

Q ss_pred             eeCcCCCeEEEEEEEcCCCC-CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          117 VVGQGAFGKVFQVKKKGVDD-GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      .||+|+||.||+++++.... ...+..+|+|.+....  .......+.+|+.+++.++||||+++++++......++|||
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME   79 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence            58999999999998764331 2233578999876432  12334567889999999999999999999999899999999


Q ss_pred             ccCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-----cEEEEecCccc
Q 023430          196 FINGGHLFFHLYRQ-------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-----HVMAAHSLNSH  263 (282)
Q Consensus       196 ~~~~g~L~~~l~~~-------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-----~v~l~Dfg~s~  263 (282)
                      |+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||||+|||++.++     .++++|||++.
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~  159 (269)
T cd05044          80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR  159 (269)
T ss_pred             ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence            99999999988642       2367889999999999999999999999999999999999887     89999999986


Q ss_pred             ccc---------cchhheeeccCccc
Q 023430          264 NQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~---------~~~~~~~~~ape~~  280 (282)
                      ...         ...++..|+|||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~  185 (269)
T cd05044         160 DIYKSDYYRKEGEGLLPVRWMAPESL  185 (269)
T ss_pred             ccccccccccCcccCCCccccCHHHH
Confidence            432         12446789999976

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.95  E-value=3.1e-27  Score=202.74  Aligned_cols=161  Identities=26%  Similarity=0.449  Sum_probs=136.8

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~  190 (282)
                      |++.+.||+|+||.||+|...     ..++.|+||.+......  .......+|+..++.++ |+||+++++.+..++..
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   73 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNK-----ETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDEL   73 (283)
T ss_pred             CeeheeeccCCceEEEEEEEC-----CCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcE
Confidence            678899999999999999976     34677999988654321  11223456889999999 99999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          191 YLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      ++||||+ +++|.+++....  .+++..+..++.|++.+|.|||+++++|+||||+||+++.++.++|+|||++..... 
T Consensus        74 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~  152 (283)
T cd07830          74 YFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR  152 (283)
T ss_pred             EEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence            9999999 778988887654  689999999999999999999999999999999999999999999999999864332 


Q ss_pred             -----chhheeeccCccc
Q 023430          268 -----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -----~~~~~~~~ape~~  280 (282)
                           ..++..|+|||++
T Consensus       153 ~~~~~~~~~~~~~aPE~~  170 (283)
T cd07830         153 PPYTDYVSTRWYRAPEIL  170 (283)
T ss_pred             CCcCCCCCcccccCceee
Confidence                 2468889999976

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.95  E-value=3.7e-27  Score=201.24  Aligned_cols=166  Identities=20%  Similarity=0.255  Sum_probs=134.2

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC---
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS---  188 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---  188 (282)
                      |.+.+.||+|+||.||+|.++..  ...+..+|||++..+.. .....+.+.+|+.+++.++||||+++++++....   
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~--~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSE--DGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG   77 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeecc--CCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC
Confidence            56778999999999999987642  23567899999876542 2233556788999999999999999999876432   


Q ss_pred             ---EEEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          189 ---KLYLILDFINGGHLFFHLYRQ------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       189 ---~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                         ..++++||+.+|+|..++...      ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.++++||
T Consensus        78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          78 RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcc
Confidence               347899999999998776432      24788899999999999999999999999999999999999999999999


Q ss_pred             Ccccccccc---------hhheeeccCccc
Q 023430          260 LNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      |+++.....         .+...|++||.+
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  187 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESL  187 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHH
Confidence            998743211         235789999976

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.95  E-value=8.6e-27  Score=204.80  Aligned_cols=164  Identities=21%  Similarity=0.294  Sum_probs=137.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe-C
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT-R  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~  187 (282)
                      .++|++.+.||+|+||.||++..+     ..+..||+|++.+... .....+.+.+|+.+++.++||||+++++++.. .
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   82 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQ-----LTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPL   82 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEEC-----CCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence            468999999999999999999876     4567899998865432 22334567789999999999999999998865 5


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ...+++|||+ +++|..++. ...+++..+..++.|++.||.|||+++|+||||||.|||++.++.++|+|||.+.....
T Consensus        83 ~~~~lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~  160 (328)
T cd07856          83 EDIYFVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP  160 (328)
T ss_pred             CcEEEEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence            5789999998 457877765 44578888999999999999999999999999999999999999999999999874322


Q ss_pred             c----hhheeeccCccc
Q 023430          268 C----FFFFLFLGGGVF  280 (282)
Q Consensus       268 ~----~~~~~~~ape~~  280 (282)
                      .    .++..|+|||.+
T Consensus       161 ~~~~~~~~~~y~aPE~~  177 (328)
T cd07856         161 QMTGYVSTRYYRAPEIM  177 (328)
T ss_pred             CcCCCcccccccCceee
Confidence            2    457789999975

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.5e-28  Score=216.57  Aligned_cols=169  Identities=22%  Similarity=0.284  Sum_probs=147.1

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      |.+...+.....+||-|.||.||.+.|+     +....||||.++.+..    .+++|..|+.+|+.++|||+|+|+|+|
T Consensus       262 WEmeRtdItMkhKLGGGQYGeVYeGvWK-----kyslTvAVKtLKEDtM----eveEFLkEAAvMKeikHpNLVqLLGVC  332 (1157)
T KOG4278|consen  262 WEMERTDITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVC  332 (1157)
T ss_pred             hhccchheeeeeccCCCcccceeeeeee-----ccceeeehhhhhhcch----hHHHHHHHHHHHHhhcCccHHHHhhhh
Confidence            4444456777789999999999999998     3456799999876543    456688899999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ..+..+|||+|||..|+|.+|+.+..  .++....+.++.||..||+||..+++|||||..+|+|+.++.-||++|||++
T Consensus       333 T~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLs  412 (1157)
T KOG4278|consen  333 THEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLS  412 (1157)
T ss_pred             ccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchh
Confidence            99999999999999999999998743  3677777888999999999999999999999999999999999999999999


Q ss_pred             cccccchh--------heeeccCccccC
Q 023430          263 HNQLCCFF--------FFLFLGGGVFNF  282 (282)
Q Consensus       263 ~~~~~~~~--------~~~~~ape~~~~  282 (282)
                      +.-..|.|        -..|.|||-|.|
T Consensus       413 RlMtgDTYTAHAGAKFPIKWTAPEsLAy  440 (1157)
T KOG4278|consen  413 RLMTGDTYTAHAGAKFPIKWTAPESLAY  440 (1157)
T ss_pred             hhhcCCceecccCccCcccccCcccccc
Confidence            87777755        357999998866

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=9.1e-27  Score=201.56  Aligned_cols=172  Identities=15%  Similarity=0.138  Sum_probs=124.8

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhH--------HHHHHHHHHHHHhcCCCCee
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH--------VDYMKAERDILTKVTHPFIV  178 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~nIv  178 (282)
                      +...+|++.++||+|+||.||+|.+....  .....+|+|+...........        ......+...+..+.|+||+
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~--~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~   86 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDH--CINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP   86 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCc--ccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence            34468999999999999999999976431  224456777543221100000        00111233445667899999


Q ss_pred             eeeEEEEeCC----EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcE
Q 023430          179 QLRYSFQTRS----KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV  254 (282)
Q Consensus       179 ~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v  254 (282)
                      ++++++....    ..+++||++.. ++.+.+......++..+..++.|++.||.|||+++|+||||||+|||++.++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~  165 (294)
T PHA02882         87 KYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG  165 (294)
T ss_pred             cEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence            9998765443    34778887744 566666555557888899999999999999999999999999999999999999


Q ss_pred             EEEecCcccccc--------------cchhheeeccCcccc
Q 023430          255 MAAHSLNSHNQL--------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       255 ~l~Dfg~s~~~~--------------~~~~~~~~~ape~~~  281 (282)
                      +|+|||+|+...              ...||+.|||||.+.
T Consensus       166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~  206 (294)
T PHA02882        166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN  206 (294)
T ss_pred             EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhC
Confidence            999999986321              114799999999763

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=3.4e-27  Score=203.19  Aligned_cols=163  Identities=21%  Similarity=0.309  Sum_probs=133.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~  188 (282)
                      ++|+..+.||+|+||.||++.+.     ..+..+|+|.+......  .....+.+|+.++.++. |+||+++++++..++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~   76 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHK-----PSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG   76 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEEC-----CCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC
Confidence            45667788999999999999976     35678999998754322  33456788999999986 999999999999999


Q ss_pred             EEEEEEeccCCCchHH---HHH--hcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 KLYLILDFINGGHLFF---HLY--RQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~---~l~--~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ..+++|||+.. ++..   .+.  ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.++|+|||++
T Consensus        77 ~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  155 (288)
T cd06616          77 DCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGIS  155 (288)
T ss_pred             cEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchh
Confidence            99999999865 4433   322  23568999999999999999999997 49999999999999999999999999998


Q ss_pred             cccc------cchhheeeccCccc
Q 023430          263 HNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~------~~~~~~~~~ape~~  280 (282)
                      ....      ...|+..|+|||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~  179 (288)
T cd06616         156 GQLVDSIAKTRDAGCRPYMAPERI  179 (288)
T ss_pred             HHhccCCccccccCccCccCHHHh
Confidence            5322      23568899999986

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.95  E-value=4.9e-27  Score=203.05  Aligned_cols=157  Identities=23%  Similarity=0.336  Sum_probs=134.9

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      ..+||+|+||.||++..+     .++..+|+|++....   ......+.+|+.+++.++|+||+++++.+...+..+++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   96 (292)
T cd06657          25 FIKIGEGSTGIVCIATVK-----SSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM   96 (292)
T ss_pred             HHHcCCCCCeEEEEEEEc-----CCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEE
Confidence            467999999999999876     356789999875432   223456888999999999999999999999999999999


Q ss_pred             eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       195 e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                      ||+++++|.+++. ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....       
T Consensus        97 e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~  175 (292)
T cd06657          97 EFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  175 (292)
T ss_pred             ecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccc
Confidence            9999999988764 45689999999999999999999999999999999999999999999999998753222       


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      ..++..|++||.+
T Consensus       176 ~~~~~~y~~pE~~  188 (292)
T cd06657         176 LVGTPYWMAPELI  188 (292)
T ss_pred             cccCccccCHHHh
Confidence            2457889999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=4.6e-27  Score=204.30  Aligned_cols=165  Identities=23%  Similarity=0.324  Sum_probs=134.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++.+.||+|+||.||+|.++     ..+..+|+|++....... .....+.+|+++++.++|+||+++++.+... 
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQI-----KTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERP   80 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEEC-----CCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheeccc
Confidence            478999999999999999999976     356679999886543211 1223466799999999999999999877543 


Q ss_pred             -------CEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          188 -------SKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       188 -------~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                             ..+++||||+.+ +|...+.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+||
T Consensus        81 ~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~df  159 (311)
T cd07866          81 DKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADF  159 (311)
T ss_pred             ccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcC
Confidence                   357999999976 56666554 346899999999999999999999999999999999999999999999999


Q ss_pred             Ccccccccc------------------hhheeeccCccc
Q 023430          260 LNSHNQLCC------------------FFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~~------------------~~~~~~~ape~~  280 (282)
                      |++......                  .+++.|+|||.+
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  198 (311)
T cd07866         160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELL  198 (311)
T ss_pred             ccchhccCCCcccccCCcccccccccceeccCcCChHHh
Confidence            988632211                  346779999975

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.95  E-value=1.1e-26  Score=198.02  Aligned_cols=166  Identities=27%  Similarity=0.454  Sum_probs=136.7

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-------hhhhHHHHHHHHHHHHHh-cCCCCeeeeeE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-------IKKNHVDYMKAERDILTK-VTHPFIVQLRY  182 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~  182 (282)
                      +|++.+.||+|+||.||++.++.    ..+..+|+|.+.....       ........+.+|+.++.+ ++|+||+++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~   76 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKN----NGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYK   76 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcC----CCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEe
Confidence            47888999999999999999763    2456899998764321       122334456678887765 78999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEE
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~  257 (282)
                      .+...+..+++|||+++++|.+++..    ...+++..+..++.|++.||.|||+ ++|+|+||||+|||++.++.++|+
T Consensus        77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~  156 (269)
T cd08528          77 TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTIT  156 (269)
T ss_pred             eEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEe
Confidence            99999999999999999999887743    3458899999999999999999996 789999999999999999999999


Q ss_pred             ecCcccccc------cchhheeeccCccc
Q 023430          258 HSLNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~------~~~~~~~~~ape~~  280 (282)
                      |||++....      ...++..|++||.+
T Consensus       157 dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~  185 (269)
T cd08528         157 DFGLAKQKQPESKLTSVVGTILYSCPEIV  185 (269)
T ss_pred             cccceeecccccccccccCcccCcChhhh
Confidence            999986322      22568899999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.95  E-value=9.5e-27  Score=195.20  Aligned_cols=148  Identities=26%  Similarity=0.366  Sum_probs=126.2

Q ss_pred             CCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeccCCC
Q 023430          121 GAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG  200 (282)
Q Consensus       121 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  200 (282)
                      |.||.||+++++     .+++.||+|.+.....        ..+|...+....||||+++++++......|++|||+++|
T Consensus         4 g~~~~v~~~~~~-----~~~~~~~~K~i~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   70 (237)
T cd05576           4 GVIDKVLLVMDT-----RTQQTFILKGLRKSSE--------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG   70 (237)
T ss_pred             cccceEEEEEEc-----cCCcEEEEEeecchhh--------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence            889999999976     4567899999876431        233455555667999999999999999999999999999


Q ss_pred             chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc----hhheeecc
Q 023430          201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC----FFFFLFLG  276 (282)
Q Consensus       201 ~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~----~~~~~~~a  276 (282)
                      +|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.++++|||++......    .++..|||
T Consensus        71 ~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~a  150 (237)
T cd05576          71 KLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCA  150 (237)
T ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccC
Confidence            99999988777999999999999999999999999999999999999999999999999987532221    34677999


Q ss_pred             Ccccc
Q 023430          277 GGVFN  281 (282)
Q Consensus       277 pe~~~  281 (282)
                      ||.++
T Consensus       151 PE~~~  155 (237)
T cd05576         151 PEVGG  155 (237)
T ss_pred             CcccC
Confidence            99864

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.94  E-value=1.4e-26  Score=200.42  Aligned_cols=169  Identities=27%  Similarity=0.365  Sum_probs=137.1

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~  183 (282)
                      +.+..++|++.+.||+|+||.||++.++     ..+..||||.+.....  ......+.+|+.++.... |+||++++++
T Consensus        10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~   82 (296)
T cd06618          10 YPADLNDLENLGEIGSGTCGQVYKMRFK-----KTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGY   82 (296)
T ss_pred             ccCCcchheeeeEeeccCCeEEEEEEEC-----CCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhhee
Confidence            4556788999999999999999999976     3467899999875432  122344556776666664 9999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +......|++|||+.+ .|..++.. ...+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.++|+|||+
T Consensus        83 ~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~  161 (296)
T cd06618          83 FITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGI  161 (296)
T ss_pred             eecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECcccc
Confidence            9999999999999854 66665544 4568899999999999999999997 6999999999999999999999999999


Q ss_pred             cccc------ccchhheeeccCcccc
Q 023430          262 SHNQ------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~------~~~~~~~~~~ape~~~  281 (282)
                      +...      ....++..|+|||.+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~  187 (296)
T cd06618         162 SGRLVDSKAKTRSAGCAAYMAPERID  187 (296)
T ss_pred             chhccCCCcccCCCCCccccCHhhcC
Confidence            8532      1224678999999873

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.94  E-value=1.1e-26  Score=202.68  Aligned_cols=159  Identities=21%  Similarity=0.270  Sum_probs=129.9

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  193 (282)
                      +.+.+|.|+++.||++  +     .++..||+|++..... .....+.+.+|+.+++.++|+||+++++++...+..+++
T Consensus         6 i~~~~~~~~~v~~~~~--~-----~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   77 (314)
T cd08216           6 IGKCFEDLMIVHLAKH--K-----PTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVV   77 (314)
T ss_pred             hhHhhcCCceEEEEEe--c-----CCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEE
Confidence            3444455555555444  3     3567899999876532 334556789999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-----
Q 023430          194 LDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-----  266 (282)
Q Consensus       194 ~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-----  266 (282)
                      |||+++++|..++...  ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.++++|||.+....     
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~  157 (314)
T cd08216          78 SPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR  157 (314)
T ss_pred             EeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccc
Confidence            9999999999988753  458899999999999999999999999999999999999999999999999875321     


Q ss_pred             ---------cchhheeeccCccc
Q 023430          267 ---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ---------~~~~~~~~~ape~~  280 (282)
                               ...++..|+|||++
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~  180 (314)
T cd08216         158 QRVVHDFPKSSVKNLPWLSPEVL  180 (314)
T ss_pred             ccccccccccccccccccCHHHh
Confidence                     11346789999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.6e-26  Score=204.16  Aligned_cols=163  Identities=20%  Similarity=0.335  Sum_probs=134.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|.+.+.||+|+||.||+|.+.     ..+..||+|++.+... .......+.+|+.+++.++|+||+++++++... 
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~   87 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDK-----RTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAV   87 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeC-----CCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccc
Confidence            358999999999999999999876     3567899999865432 222334577899999999999999999988654 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                           ...|+||||+.. +|..++  ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++
T Consensus        88 ~~~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~  164 (342)
T cd07879          88 SGDEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLA  164 (342)
T ss_pred             cCCCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence                 256999999964 665544  345899999999999999999999999999999999999999999999999998


Q ss_pred             cccccc----hhheeeccCccc
Q 023430          263 HNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~----~~~~~~~ape~~  280 (282)
                      ......    .++..|||||.+
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~  186 (342)
T cd07879         165 RHADAEMTGYVVTRWYRAPEVI  186 (342)
T ss_pred             cCCCCCCCCceeeecccChhhh
Confidence            743222    457889999975

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=8.9e-27  Score=199.61  Aligned_cols=162  Identities=25%  Similarity=0.392  Sum_probs=138.6

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |++.+.||+|.||.||+|+..     ..+..+|+|++..... .....+.+..|+.+++.++|+||+++++++...+..+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   74 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDK-----KTGEIVALKKIRLDNE-EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLY   74 (282)
T ss_pred             CeeehcccccCcceEEEeeec-----CCCcEEEEEEeccccc-cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceE
Confidence            567789999999999999976     3567899999876531 2233355678999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc--
Q 023430          192 LILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC--  268 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~--  268 (282)
                      +||||+++ +|.+++.+. ..+++..+..++.|++.||.|||++||+||||+|+||++++++.++|+|||++......  
T Consensus        75 ~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~  153 (282)
T cd07829          75 LVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR  153 (282)
T ss_pred             EEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence            99999984 899998776 57899999999999999999999999999999999999999999999999998643221  


Q ss_pred             -----hhheeeccCccc
Q 023430          269 -----FFFFLFLGGGVF  280 (282)
Q Consensus       269 -----~~~~~~~ape~~  280 (282)
                           .++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~aPE~~  170 (282)
T cd07829         154 TYTHEVVTLWYRAPEIL  170 (282)
T ss_pred             ccCccccCcCcCChHHh
Confidence                 346779999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=3.8e-26  Score=196.21  Aligned_cols=162  Identities=25%  Similarity=0.344  Sum_probs=133.3

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc---CCCCeeeeeEEEEeCC
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV---THPFIVQLRYSFQTRS  188 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~  188 (282)
                      |++.+.||+|+||.||+++++     ..+..||+|+++.... .......+.+|+.+++.+   +|+||+++++++....
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   74 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDL-----NTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR   74 (287)
T ss_pred             CeEEEEecccCceEEEEEEEC-----CCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence            678899999999999999986     3467899999875432 222233456688777665   5999999999998877


Q ss_pred             E-----EEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          189 K-----LYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       189 ~-----~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      .     .+++|||+.+ +|..++....  .+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||+
T Consensus        75 ~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~  153 (287)
T cd07838          75 TDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGL  153 (287)
T ss_pred             CCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCc
Confidence            6     9999999975 7888876643  489999999999999999999999999999999999999999999999998


Q ss_pred             cccccc------chhheeeccCccc
Q 023430          262 SHNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~------~~~~~~~~ape~~  280 (282)
                      +.....      ..++..|+|||.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~PE~~  178 (287)
T cd07838         154 ARIYSFEMALTSVVVTLWYRAPEVL  178 (287)
T ss_pred             ceeccCCcccccccccccccChHHh
Confidence            864211      1357889999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.94  E-value=2.4e-26  Score=210.12  Aligned_cols=175  Identities=19%  Similarity=0.243  Sum_probs=129.2

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCC-----------CCCCCcEEEEEEeechhhhhh-----------hHHHHHH
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVD-----------DGDSDGIYAMKVMRKDTIIKK-----------NHVDYMK  163 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~-----------~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~  163 (282)
                      .+..++|++.++||+|+||.||+|......           ....++.||||.+........           ...+...
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~  220 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM  220 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence            456789999999999999999999753221           123456799999864321110           0111233


Q ss_pred             HHHHHHHhcCCCCe-----eeeeEEEEe--------CCEEEEEEeccCCCchHHHHHhc---------------------
Q 023430          164 AERDILTKVTHPFI-----VQLRYSFQT--------RSKLYLILDFINGGHLFFHLYRQ---------------------  209 (282)
Q Consensus       164 ~E~~~l~~l~h~nI-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~---------------------  209 (282)
                      .|+.++.+++|.++     ++++++|..        .+..|+||||+++++|.+++...                     
T Consensus       221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            46677777776654     566666542        35689999999999998887632                     


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--------chhheeeccCc
Q 023430          210 ---GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--------CFFFFLFLGGG  278 (282)
Q Consensus       210 ---~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--------~~~~~~~~ape  278 (282)
                         ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.++|+|||++.....        ..+++.|+|||
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE  380 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE  380 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence               1234567888999999999999999999999999999999999999999999853211        13378999999


Q ss_pred             cc
Q 023430          279 VF  280 (282)
Q Consensus       279 ~~  280 (282)
                      .+
T Consensus       381 ~l  382 (507)
T PLN03224        381 EL  382 (507)
T ss_pred             hh
Confidence            86

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.1e-26  Score=205.37  Aligned_cols=164  Identities=21%  Similarity=0.324  Sum_probs=138.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|++.     ..+..||+|++..... .....+.+.+|+.+++.++|+||+++++++...+
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~-----~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDT-----KTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS   87 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence            568999999999999999999976     3567899998865421 2233455778999999999999999988776554


Q ss_pred             E------EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 K------LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ~------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .      .++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++
T Consensus        88 ~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~  165 (343)
T cd07851          88 SLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA  165 (343)
T ss_pred             cccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccc
Confidence            4      89999998 5689888764 56899999999999999999999999999999999999999999999999999


Q ss_pred             cccccc----hhheeeccCccc
Q 023430          263 HNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~----~~~~~~~ape~~  280 (282)
                      ......    .++..|+|||.+
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~  187 (343)
T cd07851         166 RHTDDEMTGYVATRWYRAPEIM  187 (343)
T ss_pred             ccccccccCCcccccccCHHHH
Confidence            753322    558889999975

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=1.6e-26  Score=204.18  Aligned_cols=161  Identities=20%  Similarity=0.315  Sum_probs=133.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--  187 (282)
                      ++|++.+.||+|+||.||+|..+     .++..||+|++.....   ...+.+.+|+.+++.++|+||+++++.+...  
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~-----~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~   76 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDS-----DCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGS   76 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEEC-----CCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccccc
Confidence            68999999999999999999876     4567899998865432   3345677899999999999999998776543  


Q ss_pred             ------------CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcE
Q 023430          188 ------------SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHV  254 (282)
Q Consensus       188 ------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v  254 (282)
                                  ...|+||||++ ++|..++. .+.+++..++.++.|++.||.|||++||+||||||+||+++. ++.+
T Consensus        77 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~  154 (342)
T cd07854          77 DLTEDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVL  154 (342)
T ss_pred             ccccccccccccceEEEEeeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceE
Confidence                        35899999997 48877775 456899999999999999999999999999999999999985 5578


Q ss_pred             EEEecCccccc----------ccchhheeeccCccc
Q 023430          255 MAAHSLNSHNQ----------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       255 ~l~Dfg~s~~~----------~~~~~~~~~~ape~~  280 (282)
                      +++|||.+...          ....++..|+|||.+
T Consensus       155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  190 (342)
T cd07854         155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLL  190 (342)
T ss_pred             EECCcccceecCCccccccccccccccccccCHHHH
Confidence            99999998532          112467889999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.9e-27  Score=205.43  Aligned_cols=166  Identities=25%  Similarity=0.330  Sum_probs=138.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechh--hh--hhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDT--II--KKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      ++|-++.+||+|+|+.||+|.+.     ...+.||||+-..+.  ..  .....+...+|..|-+.|+||-||++|++|.
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl-----~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs  537 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDL-----TEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS  537 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhccc-----chhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee
Confidence            46888899999999999999865     456789999864332  11  1233445668999999999999999999986


Q ss_pred             -eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--CCEeeccCCCceEEcC---CCcEEEEec
Q 023430          186 -TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC--GIVHRDLKPENILMDS---DGHVMAAHS  259 (282)
Q Consensus       186 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~--~iiHrDlKp~NILl~~---~~~v~l~Df  259 (282)
                       +.+.+|-|+|||+|.+|..++..++.+++.+++.|+-||+.||.||.+.  .|||-||||.||||-+   .|.+||.||
T Consensus       538 lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF  617 (775)
T KOG1151|consen  538 LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF  617 (775)
T ss_pred             eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence             4567999999999999999999889999999999999999999999976  4999999999999953   488999999


Q ss_pred             Ccccccccc--------------hhheeeccCccc
Q 023430          260 LNSHNQLCC--------------FFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~~~--------------~~~~~~~ape~~  280 (282)
                      |+|+.--.+              .||.-|+.||-|
T Consensus       618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcF  652 (775)
T KOG1151|consen  618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECF  652 (775)
T ss_pred             chhhhccCCccCcccceeeecccCceeeecCccee
Confidence            999632211              679999999987

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=2.1e-26  Score=197.44  Aligned_cols=162  Identities=23%  Similarity=0.407  Sum_probs=137.5

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |++.+.||+|++|.||++...     ..+..+++|.+...... ......+.+|+.+++.++|+||+++++.+..+...+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   74 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDK-----LTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLY   74 (283)
T ss_pred             CccceeeecCCCceEEEEEcC-----CCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEE
Confidence            567789999999999999865     35677999988654322 233456778999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          192 LILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      ++|||+++ +|..++.. ...+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||.+.....   
T Consensus        75 ~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~  153 (283)
T cd05118          75 LVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR  153 (283)
T ss_pred             EEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence            99999976 77777765 35789999999999999999999999999999999999999999999999998853322   


Q ss_pred             ----chhheeeccCccc
Q 023430          268 ----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ----~~~~~~~~ape~~  280 (282)
                          ..++..|++||.+
T Consensus       154 ~~~~~~~~~~~~~PE~~  170 (283)
T cd05118         154 PYTHYVVTRWYRAPELL  170 (283)
T ss_pred             cccCccCcccccCcHHH
Confidence                2468889999975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.94  E-value=1.3e-26  Score=187.67  Aligned_cols=140  Identities=18%  Similarity=0.266  Sum_probs=108.4

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhh-----------------------HHHHHHHHHHHHHhc
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN-----------------------HVDYMKAERDILTKV  172 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l  172 (282)
                      ..||+|+||.||+|...      +++.||||+++........                       .......|+.++..+
T Consensus         3 ~~ig~G~~~~Vy~a~~~------~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   76 (190)
T cd05147           3 GCISTGKEANVYHATTA------NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL   76 (190)
T ss_pred             CccccccceEEEEEECC------CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            57999999999999853      4678999999765321111                       012334599999999


Q ss_pred             CCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCCEeeccCCCceEEcCC
Q 023430          173 THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL-HKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       173 ~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~yl-H~~~iiHrDlKp~NILl~~~  251 (282)
                      .++++.........  ..+|||||++|+++.........+++..+..++.|++.+|.|+ |++||+||||||+|||++ +
T Consensus        77 ~~~~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~  153 (190)
T cd05147          77 VTAGIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-D  153 (190)
T ss_pred             HHCCCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-C
Confidence            88776443322222  2389999999987765544556789999999999999999999 799999999999999998 5


Q ss_pred             CcEEEEecCcccc
Q 023430          252 GHVMAAHSLNSHN  264 (282)
Q Consensus       252 ~~v~l~Dfg~s~~  264 (282)
                      +.++|+|||+|..
T Consensus       154 ~~v~LiDFG~a~~  166 (190)
T cd05147         154 GKLYIIDVSQSVE  166 (190)
T ss_pred             CcEEEEEcccccc
Confidence            8899999999963

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.94  E-value=1.9e-26  Score=195.64  Aligned_cols=165  Identities=23%  Similarity=0.353  Sum_probs=131.8

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh--hhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI--IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      +|.+.+.||+|+||.||++++...     +..+++|+++....  ........+.+|+.+++.++||||+++++++....
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   75 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKA-----VAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD   75 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCC-----CCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC
Confidence            488999999999999999987632     23344444432111  11122334667899999999999999999999889


Q ss_pred             EEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          189 KLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ..++||||+++++|..++..    ...+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++..
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~  154 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRL  154 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceee
Confidence            99999999999999887753    345899999999999999999999999999999999999974 6799999998864


Q ss_pred             cccc-------hhheeeccCcccc
Q 023430          265 QLCC-------FFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~~-------~~~~~~~ape~~~  281 (282)
                      ....       .++..|+|||.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~pe~~~  178 (260)
T cd08222         155 LMGSCDLATTFTGTPYYMSPEALK  178 (260)
T ss_pred             cCCCcccccCCCCCcCccCHHHHc
Confidence            3221       4578899999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.94  E-value=5e-26  Score=212.32  Aligned_cols=168  Identities=18%  Similarity=0.282  Sum_probs=118.5

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE-
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS-  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~-  183 (282)
                      ..+..++|++.++||+|+||.||+|.+..+.. ..+..||+|++.....     .+.+..|  .++...+.++..+... 
T Consensus       127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~  198 (566)
T PLN03225        127 PSFKKDDFVLGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGF  198 (566)
T ss_pred             CCCccCCeEEeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhh
Confidence            44567899999999999999999999874321 2367899998754321     1111111  1112222222222211 


Q ss_pred             -----EEeCCEEEEEEeccCCCchHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 023430          184 -----FQTRSKLYLILDFINGGHLFFHLYRQGI--------------------FREDQARFYTAEIVSAVSHLHKCGIVH  238 (282)
Q Consensus       184 -----~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~~~~~i~~qi~~gL~ylH~~~iiH  238 (282)
                           .......|+||||+.+++|.+++.....                    ..+..+..++.|++.||.|||+++|||
T Consensus       199 ~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiH  278 (566)
T PLN03225        199 LEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVH  278 (566)
T ss_pred             hcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence                 2345679999999999999988864321                    112345678999999999999999999


Q ss_pred             eccCCCceEEcC-CCcEEEEecCcccccc--------cchhheeeccCccc
Q 023430          239 RDLKPENILMDS-DGHVMAAHSLNSHNQL--------CCFFFFLFLGGGVF  280 (282)
Q Consensus       239 rDlKp~NILl~~-~~~v~l~Dfg~s~~~~--------~~~~~~~~~ape~~  280 (282)
                      |||||+|||++. ++.+||+|||+|+...        ...+++.|||||.+
T Consensus       279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~  329 (566)
T PLN03225        279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQY  329 (566)
T ss_pred             CcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHh
Confidence            999999999986 5899999999996321        12568999999965

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.1e-27  Score=195.74  Aligned_cols=159  Identities=21%  Similarity=0.290  Sum_probs=132.6

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-----E
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS-----K  189 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~  189 (282)
                      -+.||-|+||+||.+.+.     ++++.||.|++..-. ..-...+++-+|+.+|..++|.|++..++......     .
T Consensus        58 DRPIGYGAFGVVWsVTDP-----RdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE  131 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDP-----RSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE  131 (449)
T ss_pred             CCcccccceeEEEeccCC-----CCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence            367999999999988744     678899999886432 22233456778999999999999999888775443     4


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-  268 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-  268 (282)
                      +|+++|+|.. +|...+.....++.+.+..++.||++||+|||+.+|+||||||.|+|++.+.-+||||||+++....| 
T Consensus       132 iYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  132 LYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence            7888898854 78777777788999999999999999999999999999999999999999999999999999976555 


Q ss_pred             -------hhheeeccCccc
Q 023430          269 -------FFFFLFLGGGVF  280 (282)
Q Consensus       269 -------~~~~~~~ape~~  280 (282)
                             .-|--|-|||++
T Consensus       211 ~~hMTqEVVTQYYRAPEiL  229 (449)
T KOG0664|consen  211 RLNMTHEVVTQYYRAPELL  229 (449)
T ss_pred             hhhhHHHHHHHHhccHHHh
Confidence                   337778899876

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.93  E-value=4e-25  Score=179.29  Aligned_cols=141  Identities=18%  Similarity=0.217  Sum_probs=110.0

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-----------------------hhHHHHHHHHHHHHHh
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-----------------------KNHVDYMKAERDILTK  171 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~  171 (282)
                      ...||+|+||.||+|...      ++..||||+++......                       ......+.+|...+.+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~------~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   75 (190)
T cd05145           2 NGCISTGKEANVYHARTG------DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR   75 (190)
T ss_pred             CceeecCCCcEEEEEEcC------CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            467999999999999853      46789999988652110                       0012234678999999


Q ss_pred             cCCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcC
Q 023430          172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDS  250 (282)
Q Consensus       172 l~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~  250 (282)
                      +.|++|.....+....  .||||||++|+++.........++..++..++.|++.+|.++|. +||+||||||+|||++ 
T Consensus        76 l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-  152 (190)
T cd05145          76 LYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-  152 (190)
T ss_pred             HHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-
Confidence            9999875544333322  48999999988654443344567888999999999999999999 9999999999999998 


Q ss_pred             CCcEEEEecCcccc
Q 023430          251 DGHVMAAHSLNSHN  264 (282)
Q Consensus       251 ~~~v~l~Dfg~s~~  264 (282)
                      ++.++|+|||++..
T Consensus       153 ~~~~~liDFG~a~~  166 (190)
T cd05145         153 DGKPYIIDVSQAVE  166 (190)
T ss_pred             CCCEEEEEccccee
Confidence            89999999999964

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.6e-25  Score=201.16  Aligned_cols=160  Identities=28%  Similarity=0.408  Sum_probs=135.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh-cCCCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~  187 (282)
                      .+.|++...+|.|+|+.|..+.+.     .+...+++|++.+....       ..+|+.++.. -+|+||+++.+.+.+.
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~-----~t~~~~~vkii~~~~~~-------~~~e~~~~~~~~~h~niv~~~~v~~~~  388 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESS-----PTDQEPAVKIISKRADD-------NQDEIPISLLVRDHPNIVKSHDVYEDG  388 (612)
T ss_pred             chhhccccccCCCCccceeeeecc-----ccccchhheeccccccc-------cccccchhhhhcCCCcceeecceecCC
Confidence            457888888999999999999877     45566899998765211       2346655544 4699999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE-cCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM-DSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl-~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+.|+|||++.|+.|.+.+.....+. .++..|+++|+.++.|||++|||||||||+|||+ ++.|+++|+|||.++..-
T Consensus       389 ~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  389 KEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE  467 (612)
T ss_pred             ceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence            99999999999999988887766555 7888899999999999999999999999999999 689999999999997544


Q ss_pred             cc----hhheeeccCcccc
Q 023430          267 CC----FFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~~----~~~~~~~ape~~~  281 (282)
                      .+    .+|..|.|||+++
T Consensus       468 ~~~~tp~~t~~y~APEvl~  486 (612)
T KOG0603|consen  468 RSCDTPALTLQYVAPEVLA  486 (612)
T ss_pred             hhhcccchhhcccChhhhc
Confidence            44    6799999999874

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.93  E-value=1.9e-25  Score=222.00  Aligned_cols=155  Identities=21%  Similarity=0.269  Sum_probs=128.7

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|...++||+|+||.||+|+++     ..+..||||.+......       ...|++++++++|||||++++++...+..
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~  758 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSI-----KNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGA  758 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEEC-----CCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence            3555678999999999999976     35678999988643211       12468889999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCEeeccCCCceEEcCCCcEEEEecCcccc---
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH---KCGIVHRDLKPENILMDSDGHVMAAHSLNSHN---  264 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~---  264 (282)
                      |+||||+++|+|.+++..   +++..+..++.|++.||+|||   +.+|+||||||+||+++.++..++. ||....   
T Consensus       759 ~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~  834 (968)
T PLN00113        759 YLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT  834 (968)
T ss_pred             EEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence            999999999999999853   788999999999999999999   6699999999999999998887765 555432   


Q ss_pred             cccchhheeeccCcccc
Q 023430          265 QLCCFFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~~~~~~~~~ape~~~  281 (282)
                      .....+++.|||||++.
T Consensus       835 ~~~~~~t~~y~aPE~~~  851 (968)
T PLN00113        835 DTKCFISSAYVAPETRE  851 (968)
T ss_pred             CCCccccccccCccccc
Confidence            22336789999999873

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=9.3e-25  Score=205.59  Aligned_cols=176  Identities=19%  Similarity=0.311  Sum_probs=147.2

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCC--CCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeee
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGD--SDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQL  180 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l  180 (282)
                      .+.+...+..+.+.||+|.||.|++|...+.....  ....||||.++....  ....+.+..|+++|+.+. |+||+.+
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~l  367 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNL  367 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhh
Confidence            45555666677789999999999999866544322  256799999876643  255677899999999986 9999999


Q ss_pred             eEEEEeCCEEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCC
Q 023430          181 RYSFQTRSKLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPE  244 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~  244 (282)
                      .|++...+.+++|+||+..|+|..++...+                .+...+...++.||+.|++||++..+|||||-.+
T Consensus       368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR  447 (609)
T KOG0200|consen  368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR  447 (609)
T ss_pred             eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence            999999999999999999999999997655                3788899999999999999999999999999999


Q ss_pred             ceEEcCCCcEEEEecCcccccccc-hh---------heeeccCcccc
Q 023430          245 NILMDSDGHVMAAHSLNSHNQLCC-FF---------FFLFLGGGVFN  281 (282)
Q Consensus       245 NILl~~~~~v~l~Dfg~s~~~~~~-~~---------~~~~~ape~~~  281 (282)
                      |||+..+..+||+|||+|+....+ .+         -..|||||.+.
T Consensus       448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~  494 (609)
T KOG0200|consen  448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF  494 (609)
T ss_pred             hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc
Confidence            999999999999999999854333 11         23499999874

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=1.8e-27  Score=192.21  Aligned_cols=164  Identities=23%  Similarity=0.312  Sum_probs=128.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe---
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT---  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---  186 (282)
                      +.|+-+.+||+|.||.||+|+.+     ..++.||+|++-.+... ...-..-.+|+.+|..++|+|++.+++.+..   
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~-----n~~kkvalkkvlmeneK-eGfpitalreikiL~~lkHenv~nliEic~tk~T   90 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSK-----NTGKKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKAT   90 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhc-----CccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccC
Confidence            45777789999999999999977     45566888865432211 1112224569999999999999998776643   


Q ss_pred             -----CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          187 -----RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       187 -----~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                           ...+|+|+.+|+. +|.-++... ..++..++..++.+++.||.|+|+..|+|||+|++|+||+.+|.++|+|||
T Consensus        91 p~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFG  169 (376)
T KOG0669|consen   91 PTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFG  169 (376)
T ss_pred             CcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccc
Confidence                 2359999999986 777777654 568999999999999999999999999999999999999999999999999


Q ss_pred             ccccc-ccc----------hhheeeccCccc
Q 023430          261 NSHNQ-LCC----------FFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~-~~~----------~~~~~~~ape~~  280 (282)
                      +++.- ..+          .-|.-|..||.+
T Consensus       170 lar~fs~~~n~~kprytnrvvTLwYrppEll  200 (376)
T KOG0669|consen  170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELL  200 (376)
T ss_pred             cccceecccccCCCCcccceeeeecCCHHHh
Confidence            99531 111          227778888864

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.92  E-value=7.2e-24  Score=175.13  Aligned_cols=162  Identities=37%  Similarity=0.571  Sum_probs=140.9

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |.+.+.||+|++|.||++...     ..+..+++|.+......  ...+.+.+|+..++.++|+|++++++.+......+
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   73 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDK-----GTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLY   73 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEc-----CCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceE
Confidence            567789999999999999876     24567999998765322  24567888999999999999999999999889999


Q ss_pred             EEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc----
Q 023430          192 LILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL----  266 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~-~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~----  266 (282)
                      +++|++++++|..++..... +++..+..++.+++.+|.|||+++++|+||++.||+++.++.++|+|||.+....    
T Consensus        74 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~  153 (225)
T smart00221       74 LVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA  153 (225)
T ss_pred             EEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence            99999999999999987666 8999999999999999999999999999999999999999999999999886432    


Q ss_pred             ----cchhheeeccCccc
Q 023430          267 ----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ----~~~~~~~~~ape~~  280 (282)
                          ...+...|++||.+
T Consensus       154 ~~~~~~~~~~~~~~pe~~  171 (225)
T smart00221      154 ALLKTVKGTPFYLAPEVL  171 (225)
T ss_pred             ccccceeccCCcCCHhHh
Confidence                23567889999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=2.7e-25  Score=204.04  Aligned_cols=165  Identities=19%  Similarity=0.156  Sum_probs=138.0

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      .+..++||+|+||+||+|.|...+ ..-...||||++.....  ...-.++..|+-+|.+++|||+++|++++.... +.
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Peg-e~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q  773 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEG-ENVKIPVAIKVLIEFTS--PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ  773 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCC-ceecceeEEEEeeccCC--chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence            444578999999999999998653 24556799999876543  333456888999999999999999999998765 88


Q ss_pred             EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc--
Q 023430          192 LILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC--  268 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~--  268 (282)
                      ||++|+++|.|.++++.+ +.+.....+.|..||++||.|||++++|||||-.+|||+..-.+|||.|||+++-...|  
T Consensus       774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~  853 (1177)
T KOG1025|consen  774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK  853 (1177)
T ss_pred             HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence            999999999999999764 56888899999999999999999999999999999999999999999999999754444  


Q ss_pred             -------hhheeeccCccc
Q 023430          269 -------FFFFLFLGGGVF  280 (282)
Q Consensus       269 -------~~~~~~~ape~~  280 (282)
                             ..-+.|||=|.+
T Consensus       854 ey~~~~gK~pikwmale~i  872 (1177)
T KOG1025|consen  854 EYSAPGGKVPIKWMALESI  872 (1177)
T ss_pred             cccccccccCcHHHHHHHh
Confidence                   125667776654

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.91  E-value=2.1e-25  Score=178.09  Aligned_cols=159  Identities=23%  Similarity=0.370  Sum_probs=128.7

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEe
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQT  186 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~  186 (282)
                      ..++|++.+++|+|.|+.||.|.+.     .+...++||+++.-.      .+.+.+|+.||..|. ||||+++++...+
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~-----~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~D  104 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINI-----TNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKD  104 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhccccc-----CCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcC
Confidence            4578999999999999999999865     345668899986532      345889999999997 9999999999876


Q ss_pred             CC--EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-CcEEEEecCccc
Q 023430          187 RS--KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-GHVMAAHSLNSH  263 (282)
Q Consensus       187 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-~~v~l~Dfg~s~  263 (282)
                      ..  ...+++||+.+.+...+.   ..++..+++.++.+++.||+|||++||+|||+||.|++||.. ..++|+|+|++-
T Consensus       105 p~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAE  181 (338)
T KOG0668|consen  105 PESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAE  181 (338)
T ss_pred             ccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHh
Confidence            53  567999999886654333   457888999999999999999999999999999999999965 569999999993


Q ss_pred             ------ccccchhheeeccCccc
Q 023430          264 ------NQLCCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ------~~~~~~~~~~~~ape~~  280 (282)
                            .......+.-|-.||.|
T Consensus       182 FYHp~~eYnVRVASRyfKGPELL  204 (338)
T KOG0668|consen  182 FYHPGKEYNVRVASRYFKGPELL  204 (338)
T ss_pred             hcCCCceeeeeeehhhcCCchhe
Confidence                  12222445666777765

>PRK10345 hypothetical protein; Provisional

Probab=99.91  E-value=1.4e-23  Score=171.69  Aligned_cols=137  Identities=16%  Similarity=0.133  Sum_probs=105.7

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-----CCCCeeeeeEEEEeCC-
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-----THPFIVQLRYSFQTRS-  188 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~-  188 (282)
                      .+.||+|+||.||.  +..     . ...+||++.....   ...+.+.+|+.+++.+     .||||+++++++.++. 
T Consensus         7 ~~~LG~G~~~~Vy~--hp~-----~-~~k~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g   75 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPE-----D-AQRCIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG   75 (210)
T ss_pred             cceecCCCceEEEE--CCC-----C-cCeEEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC
Confidence            46899999999995  432     2 2246898865421   2335688999999999     5799999999999873 


Q ss_pred             --E-EEEEEec--cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHHCCCEeeccCCCceEEcCC----CcEEEEe
Q 023430          189 --K-LYLILDF--INGGHLFFHLYRQGIFREDQARFYTAEIVSAV-SHLHKCGIVHRDLKPENILMDSD----GHVMAAH  258 (282)
Q Consensus       189 --~-~~lv~e~--~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL-~ylH~~~iiHrDlKp~NILl~~~----~~v~l~D  258 (282)
                        . +.+||||  +.+++|.+++.+. .+.+.  ..++.|++.++ +|||+++||||||||+|||++..    +.++|+|
T Consensus        76 ~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiD  152 (210)
T PRK10345         76 TGYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCD  152 (210)
T ss_pred             CeEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence              4 3478999  5589999999653 46655  35677888887 99999999999999999999743    4799999


Q ss_pred             cCccccc
Q 023430          259 SLNSHNQ  265 (282)
Q Consensus       259 fg~s~~~  265 (282)
                      |+.+...
T Consensus       153 g~G~~~~  159 (210)
T PRK10345        153 NIGESTF  159 (210)
T ss_pred             CCCCcce
Confidence            6655443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.91  E-value=4.3e-23  Score=167.84  Aligned_cols=157  Identities=32%  Similarity=0.494  Sum_probs=135.6

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEecc
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFI  197 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  197 (282)
                      ||+|.+|.||++...     ..+..+++|++.......  ..+.+.+|+.+++.++|++|+++++++......+++||++
T Consensus         1 l~~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~   73 (215)
T cd00180           1 LGEGGFGTVYLARDK-----KTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYC   73 (215)
T ss_pred             CCcCCceEEEEEEec-----CCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecC
Confidence            689999999999865     246779999987654221  3456889999999999999999999999989999999999


Q ss_pred             CCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCccccccc-------c
Q 023430          198 NGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNSHNQLC-------C  268 (282)
Q Consensus       198 ~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~~~~~-------~  268 (282)
                      .+++|..++... ..+++..+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+.....       .
T Consensus        74 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~  153 (215)
T cd00180          74 EGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI  153 (215)
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence            999999998765 46889999999999999999999999999999999999999 89999999998863322       3


Q ss_pred             hhheeeccCcccc
Q 023430          269 FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ~~~~~~~ape~~~  281 (282)
                      .+...|++||.+.
T Consensus       154 ~~~~~~~~pe~~~  166 (215)
T cd00180         154 VGTPAYMAPEVLL  166 (215)
T ss_pred             cCCCCccChhHhc
Confidence            5689999999763

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=200.10  Aligned_cols=154  Identities=25%  Similarity=0.271  Sum_probs=123.4

Q ss_pred             EEeeeCcCCCeE-EEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEE
Q 023430          114 IFRVVGQGAFGK-VFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       114 ~~~~lG~G~fg~-V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~  191 (282)
                      -.+++|.|+.|+ ||+|...       ++.||||.+...      ......+||.+|+.-+ |||||++|+.-.+....|
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~ye-------~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~Y  579 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVYE-------GREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLY  579 (903)
T ss_pred             cHHHcccCCCCcEEEEEeeC-------CceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEE
Confidence            346789999875 6888754       567999987443      3345678999999886 999999999999999999


Q ss_pred             EEEeccCCCchHHHHHhcC-C--C-CHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---C--CcEEEEecCcc
Q 023430          192 LILDFINGGHLFFHLYRQG-I--F-REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---D--GHVMAAHSLNS  262 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~-~--~-~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---~--~~v~l~Dfg~s  262 (282)
                      |..|.|.. +|.+++.... .  . .....+.++.|++.||++||+.+||||||||.||||+.   +  ..++|+|||+|
T Consensus       580 IalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls  658 (903)
T KOG1027|consen  580 IALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLS  658 (903)
T ss_pred             EEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccc
Confidence            99999965 8999987631 1  1 11345778899999999999999999999999999976   3  46899999999


Q ss_pred             cccccc----------hhheeeccCcccc
Q 023430          263 HNQLCC----------FFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~~~----------~~~~~~~ape~~~  281 (282)
                      +..-.+          .||-+|+|||.+.
T Consensus       659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~  687 (903)
T KOG1027|consen  659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLR  687 (903)
T ss_pred             cccCCCcchhhcccCCCCcccccCHHHHh
Confidence            643222          6799999999873

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.91  E-value=4.1e-24  Score=181.63  Aligned_cols=164  Identities=24%  Similarity=0.366  Sum_probs=135.1

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC--C----Ceeee
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH--P----FIVQL  180 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~----nIv~l  180 (282)
                      +...+|+++..+|+|+||.|..|..+     ..+..||+|+++.-.    ...+.-.-|+++|.++.+  |    -+|.+
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~-----~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m  156 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDR-----ETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQM  156 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeec-----CCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEee
Confidence            33678999999999999999999876     346789999986532    233445569999999953  2    36778


Q ss_pred             eEEEEeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-------
Q 023430          181 RYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-------  251 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-------  251 (282)
                      .++|.-.++.|||+|.+ |-++++++..+.  .++...++.++.|++.++.|||+.+++|-||||+|||+-+.       
T Consensus       157 ~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~  235 (415)
T KOG0671|consen  157 RDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYN  235 (415)
T ss_pred             ehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEec
Confidence            89999999999999988 568999997754  48899999999999999999999999999999999997532       


Q ss_pred             -------------CcEEEEecCcccccccc----hhheeeccCccc
Q 023430          252 -------------GHVMAAHSLNSHNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       252 -------------~~v~l~Dfg~s~~~~~~----~~~~~~~ape~~  280 (282)
                                   -.|+++|||.+...-..    .-|..|=|||++
T Consensus       236 ~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEVi  281 (415)
T KOG0671|consen  236 PKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVI  281 (415)
T ss_pred             cCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchhe
Confidence                         23899999999865555    349999999986

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.5e-24  Score=176.95  Aligned_cols=161  Identities=20%  Similarity=0.248  Sum_probs=130.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeee-EEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLR-YSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~-~~~~~~  187 (282)
                      +.|.+.+.||+|.||.+-+|+++     .+...+++|.+.+...    ..+.|.+|...--.|. |.||+.-| ..|++.
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr-----~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~   94 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHR-----QSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTS   94 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeecc-----CCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcC
Confidence            56899999999999999999998     4567799999876543    3345777876655555 89999866 457788


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC--CCcEEEEecCccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS--DGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~--~~~v~l~Dfg~s~~~  265 (282)
                      +.++++|||++.|+|..-+... .+.|.....++.|++.|++|+|++++||||||.+||||-.  .-+||+||||+++..
T Consensus        95 d~YvF~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen   95 DAYVFVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             ceEEEeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence            8889999999999998877553 4688889999999999999999999999999999999953  357999999999743


Q ss_pred             ccc----hhheeeccCccc
Q 023430          266 LCC----FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~----~~~~~~~ape~~  280 (282)
                      -..    .+.-.|-+||.+
T Consensus       174 g~tV~~~~~~~~y~~pe~~  192 (378)
T KOG1345|consen  174 GTTVKYLEYVNNYHAPELC  192 (378)
T ss_pred             CceehhhhhhcccCCcHHH
Confidence            322    447777788765

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.90  E-value=4.7e-23  Score=171.75  Aligned_cols=152  Identities=41%  Similarity=0.633  Sum_probs=132.6

Q ss_pred             CCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeccCCCc
Q 023430          122 AFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH  201 (282)
Q Consensus       122 ~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g~  201 (282)
                      +||.||++.+..     .+..+++|++........  .+.+.+|++.++.++|+||+++++.+......++++||+++++
T Consensus         1 ~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~   73 (244)
T smart00220        1 SFGKVYLARDKK-----TGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGD   73 (244)
T ss_pred             CceEEEEEEECC-----CCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCC
Confidence            589999999763     467899999876543221  5678899999999999999999999999899999999999999


Q ss_pred             hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc------chhheeec
Q 023430          202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC------CFFFFLFL  275 (282)
Q Consensus       202 L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~------~~~~~~~~  275 (282)
                      |..++.....+++..+..++.+++.++.|||+.+++|+||+|.||+++.++.++++|||.+.....      ..++..|+
T Consensus        74 L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  153 (244)
T smart00220       74 LFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYM  153 (244)
T ss_pred             HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCC
Confidence            999987766689999999999999999999999999999999999999999999999999874333      36688999


Q ss_pred             cCccc
Q 023430          276 GGGVF  280 (282)
Q Consensus       276 ape~~  280 (282)
                      +||.+
T Consensus       154 ~pE~~  158 (244)
T smart00220      154 APEVL  158 (244)
T ss_pred             CHHHH
Confidence            99976

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.89  E-value=2.1e-22  Score=165.70  Aligned_cols=143  Identities=15%  Similarity=0.162  Sum_probs=115.0

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHH------HHHHHHHHHhcCCCCeeee
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY------MKAERDILTKVTHPFIVQL  180 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~E~~~l~~l~h~nIv~l  180 (282)
                      +..++|.+.++||+|+||.||++..       ....+|+|++.......+...+.      +.+|+..+.++.|++|..+
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-------~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~  100 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-------DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASL  100 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-------CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcc
Confidence            4467999999999999999998643       23459999997665444444333      5789999999999999999


Q ss_pred             eEEEEeC--------CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC
Q 023430          181 RYSFQTR--------SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       181 ~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~  252 (282)
                      .+++...        +..+|+|||++|.+|.+...    +++    ....+++.+|..+|+.|++|||+||+||+++.+|
T Consensus       101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g  172 (232)
T PRK10359        101 NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG  172 (232)
T ss_pred             eEeeeecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC
Confidence            8876543        35899999999999977632    333    2456999999999999999999999999999988


Q ss_pred             cEEEEecCccccc
Q 023430          253 HVMAAHSLNSHNQ  265 (282)
Q Consensus       253 ~v~l~Dfg~s~~~  265 (282)
                       ++++|||.....
T Consensus       173 -i~liDfg~~~~~  184 (232)
T PRK10359        173 -LRIIDLSGKRCT  184 (232)
T ss_pred             -EEEEECCCcccc
Confidence             999999988643

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.89  E-value=2.2e-22  Score=161.97  Aligned_cols=162  Identities=17%  Similarity=0.190  Sum_probs=129.9

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC-CCeeeeeEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH-PFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~  184 (282)
                      .+..+.|.++++||.|+||.+|.+...     ..+..||||+-.......     .+..|..+.+.|++ ..|..+..++
T Consensus        11 ~iv~gky~lvrkiGsGSFGdIy~~~~i-----~~ge~VAiK~Es~~a~hp-----qL~yEskvY~iL~~g~GiP~i~~y~   80 (341)
T KOG1163|consen   11 LIVGGKYKLVRKIGSGSFGDIYLGISI-----TSGEEVAIKLESSKAKHP-----QLLYESKVYRILQGGVGIPHIRHYG   80 (341)
T ss_pred             heeccceEEEEeecCCchhheeeeeec-----cCCceEEEEeecccCCCc-----chhHHHHHHHHhccCCCCchhhhhc
Confidence            355689999999999999999999977     467789999876554222     25668888888874 5777777777


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEEEecC
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMAAHSL  260 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l~Dfg  260 (282)
                      .+...-.+||+++ |-+|.++..- ...++...++.++-|++.-++|+|.+++|||||||+|+|..-+   ..+.++|||
T Consensus        81 ~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG  159 (341)
T KOG1163|consen   81 TEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG  159 (341)
T ss_pred             cccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc
Confidence            7888889999988 5677766643 3458899999999999999999999999999999999998643   568999999


Q ss_pred             cccccc--------------cchhheeeccCc
Q 023430          261 NSHNQL--------------CCFFFFLFLGGG  278 (282)
Q Consensus       261 ~s~~~~--------------~~~~~~~~~ape  278 (282)
                      +|+.-.              .-.||.+|++-.
T Consensus       160 LaKky~d~~t~~HIpyre~r~ltGTaRYASin  191 (341)
T KOG1163|consen  160 LAKKYRDIRTRQHIPYREDRNLTGTARYASIN  191 (341)
T ss_pred             chhhhccccccccCccccCCccceeeeehhhh
Confidence            996322              127888887643

>smart00090 RIO RIO-like kinase

Probab=99.89  E-value=1.1e-22  Score=170.02  Aligned_cols=143  Identities=22%  Similarity=0.191  Sum_probs=110.3

Q ss_pred             CeEEEeeeCcCCCeEEEEEE-EcCCCCCCCCcEEEEEEeechhhhh---------------------hhHHHHHHHHHHH
Q 023430          111 DFEIFRVVGQGAFGKVFQVK-KKGVDDGDSDGIYAMKVMRKDTIIK---------------------KNHVDYMKAERDI  168 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~-~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~~~E~~~  168 (282)
                      .|.+.+.||+|+||.||+|. +.     ..+..||+|+++......                     ......+.+|+.+
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~-----~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~  103 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFD-----GSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRN  103 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecC-----CCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHH
Confidence            47888999999999999997 33     356789999987542100                     0012346789999


Q ss_pred             HHhcCCCC--eeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-CEeeccCCCc
Q 023430          169 LTKVTHPF--IVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG-IVHRDLKPEN  245 (282)
Q Consensus       169 l~~l~h~n--Iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~N  245 (282)
                      ++.+.+.+  +.++++.    ...++||||++|++|.........+....+..++.|++.+|.+||.+| |+||||||+|
T Consensus       104 L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N  179 (237)
T smart00090      104 LQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN  179 (237)
T ss_pred             HHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence            99997533  3333332    235899999999888665534445666677899999999999999999 9999999999


Q ss_pred             eEEcCCCcEEEEecCccc
Q 023430          246 ILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~  263 (282)
                      ||++ ++.++++|||.+.
T Consensus       180 Ili~-~~~i~LiDFg~a~  196 (237)
T smart00090      180 ILVH-DGKVVIIDVSQSV  196 (237)
T ss_pred             EEEE-CCCEEEEEChhhh
Confidence            9999 8899999999886

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.7e-21  Score=170.25  Aligned_cols=134  Identities=24%  Similarity=0.427  Sum_probs=111.8

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-----C---CCeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-----H---PFIVQ  179 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~nIv~  179 (282)
                      ..++|.+.++||.|.|++||+|.+.     ...+.||+|+.+...    ...+.-..||.+|++++     |   .+||+
T Consensus        76 ~~gRY~v~rKLGWGHFSTVWLawDt-----q~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~  146 (590)
T KOG1290|consen   76 NGGRYHVQRKLGWGHFSTVWLAWDT-----QNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQ  146 (590)
T ss_pred             cCceEEEEEeccccccceeEEEeec-----cCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence            3478999999999999999999865     567889999997653    34445667999999874     2   47999


Q ss_pred             eeEEEEe----CCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH-HCCCEeeccCCCceEEcCC
Q 023430          180 LRYSFQT----RSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLH-KCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       180 l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH-~~~iiHrDlKp~NILl~~~  251 (282)
                      |++.|..    +.++|||+|++ |.+|..+|.+  .+.++...++.|++||+.||+||| .+||||-||||+|||+..+
T Consensus       147 LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  147 LLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             eeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            9999974    34899999998 5577777765  355899999999999999999999 5699999999999999654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=1.1e-21  Score=158.34  Aligned_cols=132  Identities=17%  Similarity=0.228  Sum_probs=101.0

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-hhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-KNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~  191 (282)
                      +...|++|+||+||.+..       .+..++.+.+....... ......+.+|+++|++|. |++|++++++    +..+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~   74 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRH   74 (218)
T ss_pred             cceeecCCCcceEEEeec-------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEE
Confidence            457899999999997652       34456655554332211 112235789999999996 5789988875    3479


Q ss_pred             EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecc-CCCceEEcCCCcEEEEecCccc
Q 023430          192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDL-KPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDl-Kp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ++|||+.|.+|...+..      . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||++.
T Consensus        75 lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~  140 (218)
T PRK12274         75 LDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAV  140 (218)
T ss_pred             EEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCce
Confidence            99999999988654321      1 2356789999999999999999999 7999999999999999999996

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.88  E-value=1.9e-22  Score=177.45  Aligned_cols=164  Identities=21%  Similarity=0.350  Sum_probs=135.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC------CCeeee
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH------PFIVQL  180 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~l  180 (282)
                      +..++|.+....|+|-|++|.+|...     ..+..||||+++.+..+.+.    =..|+++|++|+.      -|+++|
T Consensus       429 ~LD~RY~V~~~~GkGvFs~Vvra~D~-----~r~~~vAiKIIRnNE~M~Kt----Gl~EleiLkKL~~AD~Edk~Hclrl  499 (752)
T KOG0670|consen  429 LLDSRYEVQGYTGKGVFSTVVRARDQ-----ARGQEVAIKIIRNNEVMHKT----GLKELEILKKLNDADPEDKFHCLRL  499 (752)
T ss_pred             hhcceeEEEeccccceeeeeeecccc-----CCCCeeEEEEeecchHHhhh----hhHHHHHHHHhhccCchhhhHHHHH
Confidence            34567999999999999999999865     34558999999887655443    3459999999963      388999


Q ss_pred             eEEEEeCCEEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEE
Q 023430          181 RYSFQTRSKLYLILDFINGGHLFFHLYRQGI---FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMA  256 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l  256 (282)
                      +-.|...+++|||+|-+. .+|.+.+.+.+.   +....++.|+.|+..||..|-.+||+|.||||+|||+++.. .+||
T Consensus       500 ~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKL  578 (752)
T KOG0670|consen  500 FRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKL  578 (752)
T ss_pred             HHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeee
Confidence            999999999999999874 478888887543   77889999999999999999999999999999999999764 5799


Q ss_pred             EecCcccccccc-----hhheeeccCccc
Q 023430          257 AHSLNSHNQLCC-----FFFFLFLGGGVF  280 (282)
Q Consensus       257 ~Dfg~s~~~~~~-----~~~~~~~ape~~  280 (282)
                      ||||.|...-.+     .-+..|-|||++
T Consensus       579 CDfGSA~~~~eneitPYLVSRFYRaPEIi  607 (752)
T KOG0670|consen  579 CDFGSASFASENEITPYLVSRFYRAPEII  607 (752)
T ss_pred             ccCccccccccccccHHHHHHhccCccee
Confidence            999988643333     337889999986

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.88  E-value=6.9e-23  Score=170.65  Aligned_cols=162  Identities=20%  Similarity=0.328  Sum_probs=132.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|.-++.+|.|.- .|..+.+.     ..+..||+|++.... ......++..+|..++..++|+||++++.+|....
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~-----v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~   88 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQ-----VLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQK   88 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchh-----hccCceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccc
Confidence            347888888999988 55555433     467789999887653 33444556778999999999999999999986543


Q ss_pred             ------EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 ------KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                            .+|+|||+|.. +|...+.  -.++-..+..++.|++.|++|||+.||+||||||+||++..++.+||.|||++
T Consensus        89 ~l~~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   89 TLEEFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             cHHHHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhh
Confidence                  58999999965 6766665  34677889999999999999999999999999999999999999999999999


Q ss_pred             cccccc------hhheeeccCccc
Q 023430          263 HNQLCC------FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~------~~~~~~~ape~~  280 (282)
                      ....-+      ..+.-|=|||++
T Consensus       166 r~e~~~~~mtpyVvtRyyrapevi  189 (369)
T KOG0665|consen  166 RTEDTDFMMTPYVVTRYYRAPEVI  189 (369)
T ss_pred             cccCcccccCchhheeeccCchhe
Confidence            876666      338899999985

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=1.4e-21  Score=160.96  Aligned_cols=137  Identities=16%  Similarity=0.229  Sum_probs=111.7

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-----hhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-----IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      +.||+|++|.||+|.+.       +..+++|+......     ........+.+|+.++..+.|++|.....++......
T Consensus         2 ~~l~~G~~~~vy~~~~~-------~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~   74 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFL-------GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENF   74 (211)
T ss_pred             cccccCceEEEEEEeeC-------CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCC
Confidence            57999999999999863       34588887654321     1112234577899999999999988777677677788


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      +++|||++|++|.+.+.....    ....++.+++.+|.++|..+++|+|++|.|||++ ++.++++|||.+..
T Consensus        75 ~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            999999999999988865332    7788899999999999999999999999999999 88999999999864

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.87  E-value=1e-21  Score=164.69  Aligned_cols=157  Identities=17%  Similarity=0.190  Sum_probs=129.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~  188 (282)
                      -+|.++++||+|+||+++.|+..     -.+..||||.-......     -.+..|....+.|. .++|...|.+...+.
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl-----~nne~VAIKfEPrkS~A-----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~   97 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNL-----YNNEPVAIKFEPRKSEA-----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGK   97 (449)
T ss_pred             ccceeccccccCcceeeeccccc-----ccCceEEEEeccccCCc-----chHHHHHHHHHHHcCCCCCCceeeeccccc
Confidence            37999999999999999999866     46788999987654321     23666888888875 789999988888888


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-----cEEEEecCcc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-----HVMAAHSLNS  262 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-----~v~l~Dfg~s  262 (282)
                      +-.||||++ |-+|.++..-. ..|+...+..++.|++.-++|+|++.+|.|||||+|+||...+     .|.++|||++
T Consensus        98 ~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA  176 (449)
T KOG1165|consen   98 YNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA  176 (449)
T ss_pred             hhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccch
Confidence            888999988 56787776543 4599999999999999999999999999999999999998543     4899999999


Q ss_pred             ccccc--------------chhheeeccC
Q 023430          263 HNQLC--------------CFFFFLFLGG  277 (282)
Q Consensus       263 ~~~~~--------------~~~~~~~~ap  277 (282)
                      +...+              ..||++||+-
T Consensus       177 K~YrDp~TkqHIPYrE~KSLsGTARYMSI  205 (449)
T KOG1165|consen  177 KEYRDPKTKQHIPYREHKSLSGTARYMSI  205 (449)
T ss_pred             hhhcCccccccCccccccccccceeeeEe
Confidence            64332              2789999974

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.87  E-value=6.2e-21  Score=164.77  Aligned_cols=161  Identities=35%  Similarity=0.538  Sum_probs=138.8

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCC-CeeeeeEEEEeCCEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP-FIVQLRYSFQTRSKL  190 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~  190 (282)
                      |.+.+.||.|+||.||++.+.        ..+++|.+.............+.+|+.++..+.|+ +|+++++.+......
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~   73 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSL   73 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEE
Confidence            788899999999999999865        56899998876544333566788999999999988 799999999877788


Q ss_pred             EEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEEEecCcccc--
Q 023430          191 YLILDFINGGHLFFHLYRQG---IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMAAHSLNSHN--  264 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l~Dfg~s~~--  264 (282)
                      +++++++.++++..++....   .+.......++.|++.++.|+|..+++|||+||+||+++..+ .++++|||++..  
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~  153 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP  153 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence            99999999999997776554   689999999999999999999999999999999999999998 799999998851  


Q ss_pred             -----------cccchhheeeccCccc
Q 023430          265 -----------QLCCFFFFLFLGGGVF  280 (282)
Q Consensus       265 -----------~~~~~~~~~~~ape~~  280 (282)
                                 .....|+..|++||.+
T Consensus       154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~  180 (384)
T COG0515         154 DPGSTSSIPALPSTSVGTPGYMAPEVL  180 (384)
T ss_pred             CCCccccccccccccccccccCCHHHh
Confidence                       1233779999999976

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.86  E-value=3e-21  Score=180.00  Aligned_cols=138  Identities=17%  Similarity=0.159  Sum_probs=108.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeech-----hhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD-----TIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .|...+.||+|+||.||++.+.+.       .+++|+....     ........+++.+|+.+++.++|++|+....++.
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~-------~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~  406 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGR-------DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV  406 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCc-------cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE
Confidence            345578999999999999886521       2333332111     1111223456889999999999999988777777


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .....++||||++|++|.+++.        ....++.|++.+|.|||++||+||||||+|||+ .++.++|+|||+++.
T Consensus       407 ~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        407 DPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             eCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            7777899999999999988775        346788999999999999999999999999999 688999999999974

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.86  E-value=5.8e-21  Score=155.88  Aligned_cols=133  Identities=17%  Similarity=0.154  Sum_probs=104.8

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh-----hhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII-----KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      .||+|+||.||++.+.       +..+++|........     ......++.+|+.++..+.|+++.....++......+
T Consensus         1 ~ig~G~~~~vy~~~~~-------~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-------GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKT   73 (199)
T ss_pred             CCCCCceEEEEEeecC-------CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
Confidence            3899999999999843       345888875432211     1122356778999999999887655544555666779


Q ss_pred             EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ++|||++|++|.+.+.....       .++.+++.+|.+||+.|++|+|+||+|||++ ++.++++|||++..
T Consensus        74 lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            99999999999887754321       7788999999999999999999999999999 89999999999864

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.86  E-value=8.5e-21  Score=166.29  Aligned_cols=145  Identities=23%  Similarity=0.357  Sum_probs=119.8

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC----CCeeeeeEEE-E
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH----PFIVQLRYSF-Q  185 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~-~  185 (282)
                      +|.+.+.||+|+||.||.+......    ...+|+|+.........   ..+..|+.++..+..    .++..+++.. .
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~----~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~   91 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK----NKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRS   91 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC----CeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccC
Confidence            7999999999999999999976321    45688998765432111   146778999988873    6888898888 4


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-----CcEEEEe
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-----GHVMAAH  258 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-----~~v~l~D  258 (282)
                      .....|+||+.+ |.+|.++....  +.++...+..++.|++.+|++||+.|+|||||||+|+++...     ..+.+.|
T Consensus        92 ~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD  170 (322)
T KOG1164|consen   92 TEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLD  170 (322)
T ss_pred             CCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence            777899999987 67898877543  569999999999999999999999999999999999999865     4599999


Q ss_pred             cCccc
Q 023430          259 SLNSH  263 (282)
Q Consensus       259 fg~s~  263 (282)
                      ||+++
T Consensus       171 fGlar  175 (322)
T KOG1164|consen  171 FGLAR  175 (322)
T ss_pred             cCCCc
Confidence            99998

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.85  E-value=1e-21  Score=169.02  Aligned_cols=145  Identities=20%  Similarity=0.387  Sum_probs=124.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~  187 (282)
                      ...|.+.++||+|+|+.||++.....  ......||+|.+....     ...++.+|+++|..+. +.||+.+.+++..+
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhh--ccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence            45789999999999999999986642  2356779999886543     3345888999999986 99999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~  263 (282)
                      ++..+||||++.....++...   ++..+++.+++.++.||.++|.+|||||||||.|+|.+. .++-.|.|||++-
T Consensus       108 d~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  108 DQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             CeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHH
Confidence            999999999999877666643   678899999999999999999999999999999999985 4788999999984

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.85  E-value=8.7e-21  Score=154.86  Aligned_cols=137  Identities=18%  Similarity=0.160  Sum_probs=104.7

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh-------------------hHHHHHHHHHHHHHhc
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK-------------------NHVDYMKAERDILTKV  172 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l  172 (282)
                      |.+.+.||+|+||.||++.+.      ++..+|||+++.......                   .......+|..++..+
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   90 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP------DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL   90 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC------CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH
Confidence            777889999999999999753      467799998765321000                   0112356788889888


Q ss_pred             CCCC--eeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC
Q 023430          173 THPF--IVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS  250 (282)
Q Consensus       173 ~h~n--Iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~  250 (282)
                      .|.+  +...++    ....++||||++|++|.....      ......++.+++.++.++|..||+||||||+||+++.
T Consensus        91 ~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~  160 (198)
T cd05144          91 YEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD  160 (198)
T ss_pred             HHcCCCCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC
Confidence            8774  344433    234689999999998865432      1345678889999999999999999999999999999


Q ss_pred             CCcEEEEecCcccc
Q 023430          251 DGHVMAAHSLNSHN  264 (282)
Q Consensus       251 ~~~v~l~Dfg~s~~  264 (282)
                      ++.++|+|||.+..
T Consensus       161 ~~~~~liDfg~~~~  174 (198)
T cd05144         161 DEKIYIIDWPQMVS  174 (198)
T ss_pred             CCcEEEEECCcccc
Confidence            99999999999953

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.81  E-value=8.1e-20  Score=156.20  Aligned_cols=173  Identities=15%  Similarity=0.207  Sum_probs=142.2

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+...++++..++-+|+||.||+|.|+..++-...+.|-+|.++...  .+.++..+..|..++..+.|||+..+.+...
T Consensus       280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~i  357 (563)
T KOG1024|consen  280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSI  357 (563)
T ss_pred             hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence            34456788888999999999999999876665566667778776543  4556677889999999999999999988765


Q ss_pred             -eCCEEEEEEeccCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEE
Q 023430          186 -TRSKLYLILDFINGGHLFFHLYRQ--------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMA  256 (282)
Q Consensus       186 -~~~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l  256 (282)
                       +....++++.++.-|+|..++...        +.++..+...++.|++.|++|||++||||.||..+|.+||+.-.|||
T Consensus       358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl  437 (563)
T KOG1024|consen  358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL  437 (563)
T ss_pred             eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence             455788999999999999888621        23667788889999999999999999999999999999999999999


Q ss_pred             EecCcccccccc----hh-----heeeccCccc
Q 023430          257 AHSLNSHNQLCC----FF-----FFLFLGGGVF  280 (282)
Q Consensus       257 ~Dfg~s~~~~~~----~~-----~~~~~ape~~  280 (282)
                      +|-.+|+...-.    .|     -..||++|.+
T Consensus       438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal  470 (563)
T KOG1024|consen  438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEAL  470 (563)
T ss_pred             ccchhccccCcccccccCCCCCCcccccCHHHH
Confidence            999999854333    22     6789999987

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.80  E-value=3e-19  Score=144.26  Aligned_cols=138  Identities=20%  Similarity=0.245  Sum_probs=96.1

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHH---------------------HHHHHHHHHHhcC
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD---------------------YMKAERDILTKVT  173 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------~~~~E~~~l~~l~  173 (282)
                      .+.||+|+||.||+|...      .+..||||+++...........                     ....|...+..+.
T Consensus         2 ~~~lg~G~~g~Vy~a~~~------~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~   75 (187)
T cd05119           2 GGPIGTGKEADVYLALDG------DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY   75 (187)
T ss_pred             CcccccccceeEEEEECC------CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH
Confidence            467999999999999754      3567999998754321111111                     1134556666665


Q ss_pred             CCC--eeeeeEEEEeCCEEEEEEeccCCCchHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEc
Q 023430          174 HPF--IVQLRYSFQTRSKLYLILDFINGGHLFF-HLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMD  249 (282)
Q Consensus       174 h~n--Iv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~  249 (282)
                      +..  +.+.++.    ...++||||++++.+.. .+... .. ..++..++.+++.++.++|. ++|+||||||+||+++
T Consensus        76 ~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119          76 EAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD  149 (187)
T ss_pred             HcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhh-hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence            433  3334432    23689999999954321 11111 11 16678899999999999999 9999999999999999


Q ss_pred             CCCcEEEEecCccccc
Q 023430          250 SDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       250 ~~~~v~l~Dfg~s~~~  265 (282)
                       ++.++++|||.+...
T Consensus       150 -~~~~~liDfg~a~~~  164 (187)
T cd05119         150 -DGKVYIIDVPQAVEI  164 (187)
T ss_pred             -CCcEEEEECcccccc
Confidence             999999999999643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.80  E-value=8.2e-19  Score=147.02  Aligned_cols=137  Identities=21%  Similarity=0.278  Sum_probs=101.0

Q ss_pred             eeC-cCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh----------hhhHHHHHHHHHHHHHhcCCCCe--eeeeEE
Q 023430          117 VVG-QGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII----------KKNHVDYMKAERDILTKVTHPFI--VQLRYS  183 (282)
Q Consensus       117 ~lG-~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~~~~E~~~l~~l~h~nI--v~l~~~  183 (282)
                      .|| .|+.|+||.+...       +..+++|.+......          ......++.+|+.++..+.|++|  ++.+++
T Consensus        38 ~lg~~~g~gtv~~v~~~-------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~  110 (239)
T PRK01723         38 VVGSAKGRGTTWFVQTP-------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAA  110 (239)
T ss_pred             eeecCCCCccEEEEEeC-------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEee
Confidence            466 6777778777642       456888887543210          11223457889999999998875  556655


Q ss_pred             EEeC-C---EEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEe
Q 023430          184 FQTR-S---KLYLILDFING-GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       184 ~~~~-~---~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                      .... .   ..++|||+++| .+|.+++.. ..+++..    +.|++.+|.+||++||+||||||+|||++.++.++|+|
T Consensus       111 ~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LID  185 (239)
T PRK01723        111 RVVRHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLID  185 (239)
T ss_pred             eeeecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEE
Confidence            4332 2   23599999997 688887754 3455433    56899999999999999999999999999999999999


Q ss_pred             cCccccc
Q 023430          259 SLNSHNQ  265 (282)
Q Consensus       259 fg~s~~~  265 (282)
                      ||.+...
T Consensus       186 fg~~~~~  192 (239)
T PRK01723        186 FDRGELR  192 (239)
T ss_pred             CCCcccC
Confidence            9988654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=8.3e-20  Score=170.62  Aligned_cols=166  Identities=20%  Similarity=0.237  Sum_probs=123.3

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv  193 (282)
                      ...++|.|++|.|+.+...........+.+.+| ... ..........+..|..+-..+.|+|++.....+.......-.
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~-~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~  399 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKP-TESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS  399 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcc-cCC-cccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence            457899999998877765533222222222222 111 111122222255677777889999998876666555555555


Q ss_pred             EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc---------
Q 023430          194 LDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN---------  264 (282)
Q Consensus       194 ~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~---------  264 (282)
                      ||||++ +|+.++.+.+.+...++..++.|++.|++|+|+.||.|||||++|+++...|.+||+|||.+..         
T Consensus       400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~  478 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI  478 (601)
T ss_pred             hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence            999999 9999998887899999999999999999999999999999999999999999999999998842         


Q ss_pred             --cccchhheeeccCccccC
Q 023430          265 --QLCCFFFFLFLGGGVFNF  282 (282)
Q Consensus       265 --~~~~~~~~~~~ape~~~~  282 (282)
                        ...-.|...|+|||++.+
T Consensus       479 ~~~~g~~gS~pY~apE~~~~  498 (601)
T KOG0590|consen  479 HESSGIVGSDPYLAPEVLTG  498 (601)
T ss_pred             hhhcCcccCCcCcCcccccc
Confidence              111277999999999853

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.79  E-value=7.1e-21  Score=171.46  Aligned_cols=162  Identities=43%  Similarity=0.670  Sum_probs=138.8

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEEEEe
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      ++|+|+||.|++++..+  ....+..||+|++++.....+... ....|..++..++ ||.+|++...++.+..++++++
T Consensus         1 vlg~g~~gkvfLvrk~~--g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld   77 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAG--GADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILD   77 (612)
T ss_pred             CCCcCCCcchHHHHHhc--cccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhh
Confidence            37999999999876443  224677899999887654433333 4556888888887 9999999999999999999999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc---hhhe
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC---FFFF  272 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~---~~~~  272 (282)
                      +..||.|+..+.....+.+.....+...++.+++++|..+|+|||+|++||+++.+|++++.|||+++..+..   .|+.
T Consensus        78 ~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~  157 (612)
T KOG0603|consen   78 FLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTY  157 (612)
T ss_pred             hcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccch
Confidence            9999999999888888889999999999999999999999999999999999999999999999999754333   7799


Q ss_pred             eeccCcccc
Q 023430          273 LFLGGGVFN  281 (282)
Q Consensus       273 ~~~ape~~~  281 (282)
                      .|||||++|
T Consensus       158 eymApEI~~  166 (612)
T KOG0603|consen  158 EYRAPEIIN  166 (612)
T ss_pred             hhhhhHhhh
Confidence            999999986

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.78  E-value=1.3e-18  Score=134.82  Aligned_cols=132  Identities=20%  Similarity=0.243  Sum_probs=109.1

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC--CCeeeeeEEEEeCCEEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH--PFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~  191 (282)
                      +.+.||+|.++.||++...       +..+++|.......     ...+..|+.+++.+.|  .++++++.+....+..+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~-------~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~   69 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK-------DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSY   69 (155)
T ss_pred             cceecccccccceEEEEec-------CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccE
Confidence            3567999999999999864       24689998765432     3457789999999976  58889888888778899


Q ss_pred             EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC---GIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ++|||+.++.+..+       +......++.+++.+|.++|..   +++|+|+||+|||++..+.+++.|||.+..
T Consensus        70 ~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          70 LLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             EEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            99999998876543       4556667788999999999985   699999999999999999999999999864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.75  E-value=7.3e-19  Score=171.31  Aligned_cols=88  Identities=22%  Similarity=0.192  Sum_probs=67.8

Q ss_pred             cCC-CCeeeeeEEE-------EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccC
Q 023430          172 VTH-PFIVQLRYSF-------QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLK  242 (282)
Q Consensus       172 l~h-~nIv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlK  242 (282)
                      +.| .||++++++|       .....++++||++ +++|.+++... ..+++.+++.++.||+.||.|||++||||||||
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK  107 (793)
T PLN00181         29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR  107 (793)
T ss_pred             hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence            344 4666677766       2234577888887 55999999653 458999999999999999999999999999999


Q ss_pred             CCceEEcCCCcEEEEecC
Q 023430          243 PENILMDSDGHVMAAHSL  260 (282)
Q Consensus       243 p~NILl~~~~~v~l~Dfg  260 (282)
                      |+||||+..|.++++|||
T Consensus       108 P~NiLl~~~~~~k~~d~~  125 (793)
T PLN00181        108 PSCFVMSSFNHVSFIESA  125 (793)
T ss_pred             chhEEEcccCcEEEeecc
Confidence            999999654444444443

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=6.5e-18  Score=161.85  Aligned_cols=145  Identities=21%  Similarity=0.396  Sum_probs=115.3

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC---CCCeeeeeE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT---HPFIVQLRY  182 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~  182 (282)
                      .+....|.|.+.||+|+||.||+|...      .++.||+|+-+....  ++    |.--.+++.+|+   -+.|..+..
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~------~~~~~alK~e~P~~~--WE----fYI~~q~~~RLk~~~~~~~~~~~~  761 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHS------NGKLVALKVEKPPNP--WE----FYICLQVMERLKPQMLPSIMHISS  761 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecC------CCcEEEEEeecCCCc--ee----eeehHHHHHhhchhhhcchHHHHH
Confidence            345567999999999999999999865      278899998765432  11    111223344444   245566666


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-------CcEE
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-------GHVM  255 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-------~~v~  255 (282)
                      ++.-.+.-+||+||.+.|+|.+++...+.+++..+..+..|++.-++.||.++|||+||||+|+||...       -.++
T Consensus       762 a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~  841 (974)
T KOG1166|consen  762 AHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLY  841 (974)
T ss_pred             HHccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceE
Confidence            666677789999999999999999988889999999999999999999999999999999999999532       3489


Q ss_pred             EEecCcc
Q 023430          256 AAHSLNS  262 (282)
Q Consensus       256 l~Dfg~s  262 (282)
                      |+|||-|
T Consensus       842 lIDfG~s  848 (974)
T KOG1166|consen  842 LIDFGRS  848 (974)
T ss_pred             EEecccc
Confidence            9999977

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=1.4e-17  Score=143.06  Aligned_cols=175  Identities=24%  Similarity=0.293  Sum_probs=118.7

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCC------------------------------CCCCcEEEEEEeechhh-
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDD------------------------------GDSDGIYAMKVMRKDTI-  153 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~------------------------------~~~~~~vavK~~~~~~~-  153 (282)
                      .++.+++|++.+.||+|....||.+.....+.                              +...-..|||.+-.-.. 
T Consensus       152 skFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~  231 (598)
T KOG4158|consen  152 SKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHD  231 (598)
T ss_pred             cccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccC
Confidence            34667889999999999999999887554210                              00112245565432111 


Q ss_pred             -hhhhHHHHHHHHHH------H-----------HH----h-cCCCCeeeeeEEEEeC-----------------------
Q 023430          154 -IKKNHVDYMKAERD------I-----------LT----K-VTHPFIVQLRYSFQTR-----------------------  187 (282)
Q Consensus       154 -~~~~~~~~~~~E~~------~-----------l~----~-l~h~nIv~l~~~~~~~-----------------------  187 (282)
                       .+...++.+.+|..      .           ++    . -+|||||++..+|.+.                       
T Consensus       232 s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g  311 (598)
T KOG4158|consen  232 SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSG  311 (598)
T ss_pred             CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccc
Confidence             11222333333321      1           11    1 3599999998777432                       


Q ss_pred             ----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc--CCC--cEEEEec
Q 023430          188 ----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD--SDG--HVMAAHS  259 (282)
Q Consensus       188 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~--~~~--~v~l~Df  259 (282)
                          ..+|+||.-.+. +|..++..+. .+......++.|+++|+.|||.+||.|||+|.+|||+.  +|+  .++++||
T Consensus       312 ~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDF  389 (598)
T KOG4158|consen  312 AGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADF  389 (598)
T ss_pred             cCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccc
Confidence                248999987754 8888887654 46667778889999999999999999999999999984  333  3789999


Q ss_pred             Cccc-------------ccccchhheeeccCcccc
Q 023430          260 LNSH-------------NQLCCFFFFLFLGGGVFN  281 (282)
Q Consensus       260 g~s~-------------~~~~~~~~~~~~ape~~~  281 (282)
                      |.|-             ..+..-|...-||||+++
T Consensus       390 GCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t  424 (598)
T KOG4158|consen  390 GCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT  424 (598)
T ss_pred             ceeeeccccccccccccccccCCCcceecchhhhh
Confidence            9773             223335589999999975

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.63  E-value=2.8e-15  Score=136.04  Aligned_cols=140  Identities=16%  Similarity=0.193  Sum_probs=93.6

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-------------------------------hhHHH----
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-------------------------------KNHVD----  160 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------~~~~~----  160 (282)
                      +.||.|++|.||+|+.+      +++.||||+.+......                               .+..+    
T Consensus       123 ~plasaSigQVh~A~l~------~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  196 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV------DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR  196 (437)
T ss_pred             cceeeeehhheEEEEec------CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence            56999999999999865      46789999987542100                               00000    


Q ss_pred             --HHHHHHHHHHhc----CCCCeeeeeEEE-EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHH
Q 023430          161 --YMKAERDILTKV----THPFIVQLRYSF-QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVS-AVSHL  231 (282)
Q Consensus       161 --~~~~E~~~l~~l----~h~nIv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~-gL~yl  231 (282)
                        .+.+|...+..+    +|.+-+.+...+ ......+|||||++|++|.+..... ....   ...++.+++. .+..+
T Consensus       197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql  273 (437)
T TIGR01982       197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQV  273 (437)
T ss_pred             HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHH
Confidence              133455555444    233223332222 2234579999999999997765432 1122   2345555555 47789


Q ss_pred             HHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          232 HKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       232 H~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      |..|++|+|+||.||+++.+|.++++|||++..
T Consensus       274 ~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~  306 (437)
T TIGR01982       274 LRDGFFHADLHPGNIFVLKDGKIIALDFGIVGR  306 (437)
T ss_pred             HhCCceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence            999999999999999999999999999999853

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.62  E-value=6.5e-17  Score=132.75  Aligned_cols=167  Identities=16%  Similarity=0.218  Sum_probs=135.9

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++..++.+|.+...|..|+++|.+.       -+++|++.......+. -+.|..|.-.|+-+.||||+.+++.+..
T Consensus       187 id~~~lnl~tkl~e~hsgelwrgrwqgn-------divakil~vr~~t~ri-srdfneefp~lrifshpnilpvlgacns  258 (448)
T KOG0195|consen  187 IDVSSLNLITKLAESHSGELWRGRWQGN-------DIVAKILNVREVTARI-SRDFNEEFPALRIFSHPNILPVLGACNS  258 (448)
T ss_pred             cchhhhhhhhhhccCCCcccccccccCc-------chhhhhhhhhhcchhh-cchhhhhCcceeeecCCchhhhhhhccC
Confidence            3344566677899999999999998743       2566777654433322 2347778888999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcCCCcEEE--EecC
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDSDGHVMA--AHSL  260 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~~~~v~l--~Dfg  260 (282)
                      ...+.++..||+.|+|+..++.+..  .+..++.+++.++++|+.|||+..  |----|....+++|++...+|  +|--
T Consensus       259 ppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~k  338 (448)
T KOG0195|consen  259 PPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTK  338 (448)
T ss_pred             CCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccce
Confidence            9999999999999999999987654  577899999999999999999875  334468889999999876554  5888


Q ss_pred             cccccccchhheeeccCcccc
Q 023430          261 NSHNQLCCFFFFLFLGGGVFN  281 (282)
Q Consensus       261 ~s~~~~~~~~~~~~~ape~~~  281 (282)
                      +|.+.....|.+.||+||.++
T Consensus       339 fsfqe~gr~y~pawmspealq  359 (448)
T KOG0195|consen  339 FSFQEVGRAYSPAWMSPEALQ  359 (448)
T ss_pred             eeeeccccccCcccCCHHHHh
Confidence            888999999999999999874

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.62  E-value=7.2e-16  Score=141.82  Aligned_cols=141  Identities=16%  Similarity=0.239  Sum_probs=91.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-------------------------------hhH
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-------------------------------KNH  158 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------~~~  158 (282)
                      .+|+. +.||.|++|.||+|+.+.     +++.||||+.++.....                               .+.
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~-----~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~  193 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKD-----NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEF  193 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECC-----CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHH
Confidence            34665 789999999999999872     36789999998652100                               011


Q ss_pred             HHHHH------HHHHHHHhc----CCCCeeeeeEEEEe-CCEEEEEEeccCCCchHHH--HHhcCC----CCHHHHHHHH
Q 023430          159 VDYMK------AERDILTKV----THPFIVQLRYSFQT-RSKLYLILDFINGGHLFFH--LYRQGI----FREDQARFYT  221 (282)
Q Consensus       159 ~~~~~------~E~~~l~~l----~h~nIv~l~~~~~~-~~~~~lv~e~~~~g~L~~~--l~~~~~----~~~~~~~~i~  221 (282)
                      .+.+.      +|+..+.++    .+.+.+.+...+.+ ....+|||||+.|+.+.+.  +...+.    +.+..+..++
T Consensus       194 ~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~  273 (537)
T PRK04750        194 EKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF  273 (537)
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH
Confidence            12222      333333333    23333433333322 3457899999999998764  333321    2333333444


Q ss_pred             HHHHHHHHHHHHCCCEeeccCCCceEEcCCC----cEEEEecCccc
Q 023430          222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDG----HVMAAHSLNSH  263 (282)
Q Consensus       222 ~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~----~v~l~Dfg~s~  263 (282)
                      .|+       ...|++|+|+||.||+++.+|    .+++.|||+..
T Consensus       274 ~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg  312 (537)
T PRK04750        274 TQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVG  312 (537)
T ss_pred             HHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEE
Confidence            444       468999999999999999988    99999999885

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.60  E-value=1.3e-16  Score=151.58  Aligned_cols=161  Identities=20%  Similarity=0.305  Sum_probs=126.3

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechh--hhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDT--IIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      +|...+.||.+.|=+|.+|+++       .+.|+||++-+..  ..-....+++ .|++ ...+++||++.+..+.....
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~-------eG~vVvKVFvk~~p~~sL~~~~qrL-~~ik-~~l~~~pn~lPfqk~~~t~k   94 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR-------EGLVVVKVFVKQDPTISLRPFKQRL-EEIK-FALMKAPNCLPFQKVLVTDK   94 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC-------CceEEEEEEeccCCCCCchHHHHHH-HHHH-HHhhcCCcccchHHHHHhhH
Confidence            6888899999999999999865       3458999886653  1222333333 3555 56678999999987777777


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc-----
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH-----  263 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~-----  263 (282)
                      ..|||-+|... +|++.+..+.-+...+.+.|+.|++.||.-+|..||+|+|||.+||||+.=+-+.|+||..=+     
T Consensus        95 AAylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP  173 (1431)
T KOG1240|consen   95 AAYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP  173 (1431)
T ss_pred             HHHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence            78888888855 899998777667788889999999999999999999999999999999999999999997432     


Q ss_pred             -ccccchh--------heeeccCcccc
Q 023430          264 -NQLCCFF--------FFLFLGGGVFN  281 (282)
Q Consensus       264 -~~~~~~~--------~~~~~ape~~~  281 (282)
                       .+=.||+        =..|+|||.|.
T Consensus       174 eDNPadf~fFFDTSrRRtCYiAPERFv  200 (1431)
T KOG1240|consen  174 EDNPADFTFFFDTSRRRTCYIAPERFV  200 (1431)
T ss_pred             CCCcccceEEEecCCceeeecChHhhh
Confidence             3333422        24699999984

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.58  E-value=1.4e-14  Score=115.00  Aligned_cols=127  Identities=21%  Similarity=0.241  Sum_probs=93.3

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCee-eeeEEEEeCCEEEEE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIV-QLRYSFQTRSKLYLI  193 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~lv  193 (282)
                      .+.|+.|.++.||+++..       ++.|++|+......    ....+..|+.+++.+.+.+++ +++....  ...++|
T Consensus         3 ~~~l~~G~~~~vy~~~~~-------~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv   69 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-------NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLI   69 (170)
T ss_pred             eeecCCcccCceEEEEEC-------CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEE
Confidence            357899999999998743       45699998754421    112256788888888655544 4544432  345899


Q ss_pred             EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC-----EeeccCCCceEEcCCCcEEEEecCccc
Q 023430          194 LDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGI-----VHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       194 ~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~i-----iHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      |||++|.++...    .    .....++.+++++|..||..++     +|+|++|.||+++ ++.++++||+.+.
T Consensus        70 ~e~i~G~~l~~~----~----~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          70 TEFIEGSELLTE----D----FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             EEecCCCccccc----c----ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            999999877532    0    1113456789999999999885     9999999999999 6789999999886

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.55  E-value=9.1e-14  Score=112.10  Aligned_cols=142  Identities=18%  Similarity=0.246  Sum_probs=98.0

Q ss_pred             eeeCcCCCeEEEEEEEcCCC-CCCCCcEEEEEEeechhh--------h--h---------hhHHHHH----HHHHHHHHh
Q 023430          116 RVVGQGAFGKVFQVKKKGVD-DGDSDGIYAMKVMRKDTI--------I--K---------KNHVDYM----KAERDILTK  171 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~-~~~~~~~vavK~~~~~~~--------~--~---------~~~~~~~----~~E~~~l~~  171 (282)
                      ..||.|.-+.||.|...... ....+..+|||+.+....        .  +         ....+.+    .+|...|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            46899999999999743100 001346799998763210        0  0         1112223    379999988


Q ss_pred             cCC--CCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCCEeeccCCCceEE
Q 023430          172 VTH--PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL-HKCGIVHRDLKPENILM  248 (282)
Q Consensus       172 l~h--~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~yl-H~~~iiHrDlKp~NILl  248 (282)
                      +..  -++.+.+++    ..-+|||||+.+..+.....+...++..+...+..+++.+|..| |..||||+||++.|||+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~  158 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW  158 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            863  355556554    34689999998754432222333455666777889999999998 89999999999999999


Q ss_pred             cCCCcEEEEecCcc
Q 023430          249 DSDGHVMAAHSLNS  262 (282)
Q Consensus       249 ~~~~~v~l~Dfg~s  262 (282)
                      + ++.+.++|||-+
T Consensus       159 ~-~~~v~iIDF~qa  171 (197)
T cd05146         159 H-DGKVWFIDVSQS  171 (197)
T ss_pred             E-CCcEEEEECCCc
Confidence            7 578999999976

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.50  E-value=4.9e-13  Score=113.53  Aligned_cols=164  Identities=23%  Similarity=0.288  Sum_probs=100.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC----------CCeeee
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH----------PFIVQL  180 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----------~nIv~l  180 (282)
                      .+...+.||.|+|+.||.+++.     .++..+|+|+............+.+++|.-....+.+          -.++--
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~-----~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P   87 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDV-----ETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP   87 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET-----TTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred             EEEEccccccCCceEEEEEEEc-----cCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence            4566789999999999999977     4677899999876555555666777777644433222          111111


Q ss_pred             eEEE---------EeCC--------EEEEEEeccCCCchHHHHH---hcCCC--C-HHHH-HHHHHHHHHHHHHHHHCCC
Q 023430          181 RYSF---------QTRS--------KLYLILDFINGGHLFFHLY---RQGIF--R-EDQA-RFYTAEIVSAVSHLHKCGI  236 (282)
Q Consensus       181 ~~~~---------~~~~--------~~~lv~e~~~~g~L~~~l~---~~~~~--~-~~~~-~~i~~qi~~gL~ylH~~~i  236 (282)
                      ++..         ....        ..+++|+-+. ++|.+++.   .....  . ...+ ..+..|+++.+++||.+||
T Consensus        88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl  166 (288)
T PF14531_consen   88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL  166 (288)
T ss_dssp             SEEEEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce
Confidence            1211         1111        2366777764 47766543   22222  1 1222 3445799999999999999


Q ss_pred             EeeccCCCceEEcCCCcEEEEecCcccc----cccchhheeeccCccc
Q 023430          237 VHRDLKPENILMDSDGHVMAAHSLNSHN----QLCCFFFFLFLGGGVF  280 (282)
Q Consensus       237 iHrDlKp~NILl~~~~~v~l~Dfg~s~~----~~~~~~~~~~~ape~~  280 (282)
                      ||+||||+|++++.+|.++|.||+....    ..+...+..|.+||..
T Consensus       167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~  214 (288)
T PF14531_consen  167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELE  214 (288)
T ss_dssp             EEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHH
T ss_pred             EecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhh
Confidence            9999999999999999999999975532    1223446677777753

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=6.5e-13  Score=104.15  Aligned_cols=133  Identities=20%  Similarity=0.164  Sum_probs=97.5

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechh-----hhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDT-----IIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      .+++|+-+.+|.+.+.+       ..+++|.-.+..     ...+-...+..+|+.++.++.--.|..-+-+..+.+...
T Consensus         3 ~i~~GAEa~i~~~~~~g-------~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~   75 (204)
T COG3642           3 LIKQGAEAIIYLTDFLG-------LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGL   75 (204)
T ss_pred             hhhCCcceeEEeeeccC-------cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCE
Confidence            57889999999886642       235555433222     223333456678999998887555554444555667788


Q ss_pred             EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      |+|||++|..|.+.+...       ...++..+-.-+.-||..||||+||.++||++..++ +.++|||++..
T Consensus        76 I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          76 IVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            999999998888888654       144566677778889999999999999999997655 99999999963

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.47  E-value=6.7e-13  Score=103.75  Aligned_cols=144  Identities=21%  Similarity=0.173  Sum_probs=105.2

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEee-----chhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR-----KDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~-----~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .+..|-+|+-+.|+++.+.       ++.+.||.-.     ......+-..++..+|+.+|.++.--.|.--.-+|.+..
T Consensus        11 ~l~likQGAEArv~~~~~~-------Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~   83 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-------GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY   83 (229)
T ss_pred             cceeeeccceeeEeeeccC-------CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence            4567889999999998865       4455666432     223333445567888999999887555554444556666


Q ss_pred             EEEEEEeccCCC-chHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc---EEEEecCcc
Q 023430          189 KLYLILDFINGG-HLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH---VMAAHSLNS  262 (282)
Q Consensus       189 ~~~lv~e~~~~g-~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~---v~l~Dfg~s  262 (282)
                      .-.|+|||++|- ++.+++.....  ........++.+|-+.+.-||..+|||+||.++||+|..+|.   +.++|||++
T Consensus        84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls  163 (229)
T KOG3087|consen   84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLS  163 (229)
T ss_pred             CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecch
Confidence            678999999873 66777765422  222233678889999999999999999999999999977654   589999999


Q ss_pred             cc
Q 023430          263 HN  264 (282)
Q Consensus       263 ~~  264 (282)
                      ..
T Consensus       164 ~~  165 (229)
T KOG3087|consen  164 SV  165 (229)
T ss_pred             hc
Confidence            64

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.46  E-value=3.6e-14  Score=134.87  Aligned_cols=127  Identities=34%  Similarity=0.517  Sum_probs=91.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..+|+.++.|..|+||.||.++++.     +...+|+| ++++....       ++   ++.....|.+|          
T Consensus        82 e~df~~IklisngAygavylvrh~~-----trqrfa~k-iNkq~lil-------Rn---ilt~a~npfvv----------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKE-----TRQRFAMK-INKQNLIL-------RN---ILTFAGNPFVV----------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccc-----cccchhhc-ccccchhh-------hc---cccccCCccee----------
Confidence            4689999999999999999999883     45568885 33332111       11   23333344433          


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc----
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN----  264 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~----  264 (282)
                                 |+....+..-+.++.        +++.+++|||+.||+|||+||+|+||..-|++|+.|||+++.    
T Consensus       136 -----------gDc~tllk~~g~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms  196 (1205)
T KOG0606|consen  136 -----------GDCATLLKNIGPLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS  196 (1205)
T ss_pred             -----------chhhhhcccCCCCcc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence                       455555554444443        337899999999999999999999999999999999998841    


Q ss_pred             ---------------cccc---hhheeeccCccc
Q 023430          265 ---------------QLCC---FFFFLFLGGGVF  280 (282)
Q Consensus       265 ---------------~~~~---~~~~~~~ape~~  280 (282)
                                     ++.|   .||+.|+|||++
T Consensus       197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             ccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence                           1222   779999999986

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=4.6e-15  Score=138.92  Aligned_cols=165  Identities=22%  Similarity=0.288  Sum_probs=133.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSK  189 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~  189 (282)
                      .|.+.+.||+|+|+.|-......    .....+|+|.+.... ........+..|..+-+.+. |.|++.+++.......
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~----~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~   95 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSR----DPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRS   95 (601)
T ss_pred             cccccccccccccchhhhhhhcC----CCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcc
Confidence            57777889999999998765432    234456777665443 22334445566887777887 9999999999999999


Q ss_pred             EEEEEeccCCCchHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-HCCCEeeccCCCceEEcCCC-cEEEEecCccccc
Q 023430          190 LYLILDFINGGHLFFHL-YRQG-IFREDQARFYTAEIVSAVSHLH-KCGIVHRDLKPENILMDSDG-HVMAAHSLNSHNQ  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l-~~~~-~~~~~~~~~i~~qi~~gL~ylH-~~~iiHrDlKp~NILl~~~~-~v~l~Dfg~s~~~  265 (282)
                      .+++++|..|++++..+ .... ..+...+..++.|+..++.|+| ..++.||||||+|.+++..+ ..+++|||+|...
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence            99999999999998888 4443 5777888999999999999999 99999999999999999999 9999999998532


Q ss_pred             c----------cchh-heeeccCccc
Q 023430          266 L----------CCFF-FFLFLGGGVF  280 (282)
Q Consensus       266 ~----------~~~~-~~~~~ape~~  280 (282)
                      -          ...| ++.|+|||.+
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~  201 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHL  201 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccc
Confidence            2          2277 9999999986

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.38  E-value=9.3e-13  Score=105.00  Aligned_cols=73  Identities=19%  Similarity=0.098  Sum_probs=64.0

Q ss_pred             CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc--ccchhheeecc
Q 023430          200 GHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ--LCCFFFFLFLG  276 (282)
Q Consensus       200 g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~--~~~~~~~~~~a  276 (282)
                      |+|.+++... ..+++.++..++.|++.||.|||+++      ||+|||++.++.+++  ||++...  ....|++.|||
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y~a   72 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYFMA   72 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccCCCcccccC
Confidence            6888888764 45999999999999999999999998      999999999999999  9998643  22367999999


Q ss_pred             Cccc
Q 023430          277 GGVF  280 (282)
Q Consensus       277 pe~~  280 (282)
                      ||++
T Consensus        73 PE~~   76 (176)
T smart00750       73 PEVI   76 (176)
T ss_pred             hHHh
Confidence            9987

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.37  E-value=3.5e-12  Score=105.35  Aligned_cols=140  Identities=13%  Similarity=0.182  Sum_probs=98.4

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCC--CeeeeeEEEEeC---CEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP--FIVQLRYSFQTR---SKL  190 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~---~~~  190 (282)
                      +.|+.|.++.||++...      .+..+++|+.......  .....+.+|.++++.+.+.  ++.+++.+....   +..
T Consensus         4 ~~l~~G~~n~~~~v~~~------~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~   75 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG------GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTP   75 (223)
T ss_pred             eecCCCccceEEEEEec------CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCc
Confidence            56899999999998754      1356899987654321  1234577899999998753  356666665543   256


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-------------------------------------  233 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-------------------------------------  233 (282)
                      ++||||++|.++...+.. ..+++.+...++.++++.|..||+                                     
T Consensus        76 ~~v~e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (223)
T cd05154          76 FYVMERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP  154 (223)
T ss_pred             eEEEEEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence            899999999877554321 234555555666666666666663                                     


Q ss_pred             -------------------CCCEeeccCCCceEEcC--CCcEEEEecCcccc
Q 023430          234 -------------------CGIVHRDLKPENILMDS--DGHVMAAHSLNSHN  264 (282)
Q Consensus       234 -------------------~~iiHrDlKp~NILl~~--~~~v~l~Dfg~s~~  264 (282)
                                         ..++|+|+++.|||++.  ++.+.|+||+.+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                               24699999999999998  56689999998864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.37  E-value=3.8e-14  Score=126.03  Aligned_cols=89  Identities=22%  Similarity=0.220  Sum_probs=75.9

Q ss_pred             EEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQG---IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ-  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~-  265 (282)
                      +||.|++|...+|.+++.+..   ..+....+.++.|++.|++|   ++.+|||+||.||+...++.+||.|||+...+ 
T Consensus       331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~  407 (516)
T KOG1033|consen  331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQD  407 (516)
T ss_pred             hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecc
Confidence            678999999999999997543   35667888999999999999   99999999999999999999999999987422 


Q ss_pred             ------------ccchhheeeccCcccc
Q 023430          266 ------------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ------------~~~~~~~~~~ape~~~  281 (282)
                                  ..+.||..||+||.+.
T Consensus       408 ~~~~~~~~~a~~t~~~gt~~YmsPEQi~  435 (516)
T KOG1033|consen  408 KDETVAPAAASHTQQVGTLLYMSPEQIR  435 (516)
T ss_pred             cCCcccchhhhhhhcccccccCCHHHHh
Confidence                        2337899999999873

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.28  E-value=5.2e-12  Score=114.29  Aligned_cols=166  Identities=20%  Similarity=0.145  Sum_probs=127.0

Q ss_pred             CeEEEeeeCc--CCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeC
Q 023430          111 DFEIFRVVGQ--GAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTR  187 (282)
Q Consensus       111 ~y~~~~~lG~--G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~  187 (282)
                      .+.+.+.+|.  |.+|.||.+....   ......+|+|.-+...... .....=.+|+...++++ |+|.++.+..|...
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~---~~s~~~~a~k~s~~p~s~p-~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~  190 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTN---SESPHKFAVKKSKIPFSPP-LDSKRKLREFLSHHKIDSHENPVRDSPAWEGS  190 (524)
T ss_pred             hcccccccccCCCCCceeecccCCc---ccCCcccccccccCCCCCc-cccccccchhhcccccCccccccccCcccccC
Confidence            4566778999  9999999987622   2455668888643222111 11111234666666675 99999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHHCCCEeeccCCCceEEcCC-CcEEEEecCc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVS----AVSHLHKCGIVHRDLKPENILMDSD-GHVMAAHSLN  261 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~i~~qi~~----gL~ylH~~~iiHrDlKp~NILl~~~-~~v~l~Dfg~  261 (282)
                      +.+|+-+|+|. .+|..+...... ++...+...+.+...    ||.++|..+++|-|+||+||++..+ ...++.|||+
T Consensus       191 ~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~  269 (524)
T KOG0601|consen  191 GILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGL  269 (524)
T ss_pred             Ccceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcce
Confidence            99999999995 688787766544 788888888888888    9999999999999999999999999 7788889975


Q ss_pred             cc------------ccccchhheeeccCcccc
Q 023430          262 SH------------NQLCCFFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~------------~~~~~~~~~~~~ape~~~  281 (282)
                      ..            ..+...|...||+||..|
T Consensus       270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~  301 (524)
T KOG0601|consen  270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLN  301 (524)
T ss_pred             eEEccCCccccceeeeecCCCCceEeChhhhc
Confidence            42            334448899999999875

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.25  E-value=3.4e-10  Score=96.20  Aligned_cols=102  Identities=13%  Similarity=0.052  Sum_probs=77.6

Q ss_pred             HHHHHHHHHhcCCCCee--eeeEEEEe-----CCEEEEEEeccCCC-chHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Q 023430          162 MKAERDILTKVTHPFIV--QLRYSFQT-----RSKLYLILDFINGG-HLFFHLYR--QGIFREDQARFYTAEIVSAVSHL  231 (282)
Q Consensus       162 ~~~E~~~l~~l~h~nIv--~l~~~~~~-----~~~~~lv~e~~~~g-~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~yl  231 (282)
                      ..+|...+..|..-+|.  +..++...     ....+||||++++- +|.+++..  ...........++.+++..+.-|
T Consensus        75 a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~L  154 (268)
T PRK15123         75 ADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDM  154 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            56788888777533332  23334332     23578999999886 78888753  23455667788999999999999


Q ss_pred             HHCCCEeeccCCCceEEcC-------CCcEEEEecCccc
Q 023430          232 HKCGIVHRDLKPENILMDS-------DGHVMAAHSLNSH  263 (282)
Q Consensus       232 H~~~iiHrDlKp~NILl~~-------~~~v~l~Dfg~s~  263 (282)
                      |..||+|+|+++.|||++.       +..+.++||+.+.
T Consensus       155 H~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        155 HAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            9999999999999999975       4679999999884

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.23  E-value=5.6e-12  Score=114.07  Aligned_cols=150  Identities=25%  Similarity=0.305  Sum_probs=120.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~  187 (282)
                      ..+|..+..||.|.|+.|+.+..+.    ..+.+|++|.+.+........+..+ .|+.+...+. |.+++.++..|...
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~----~~~~~Y~~ke~~~~l~~~~~di~sl-~ev~l~~~l~~~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRP----EGDCIYAAKELLNGLATFASDIFSL-GEVILEAILGSHLPSVGKNSSWSQL  338 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecC----CCCceEeChhhhccccchHhhhcch-hhhhHhhHhhcccccCCCCCCcccc
Confidence            4578889999999999999877432    3567899998876554433333333 4666666665 99999998888888


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-CcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-GHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-~~v~l~Dfg~s~  263 (282)
                      ...|+-.|||+++++...+.-...+.+...+.+..|++.++.++|+..++|+|+||.||++..+ +..++.|||...
T Consensus       339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccc
Confidence            8889999999999887666545567888999999999999999999999999999999999886 777888998774

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.20  E-value=2.7e-11  Score=109.50  Aligned_cols=112  Identities=16%  Similarity=0.091  Sum_probs=97.4

Q ss_pred             HHhcCCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC-EeeccCCCce
Q 023430          169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGI-VHRDLKPENI  246 (282)
Q Consensus       169 l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~i-iHrDlKp~NI  246 (282)
                      |+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ...+++.-...++++++.||.|||.-.| .|+.++..|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            4568899999999999999999999999999999999976 3457788888899999999999997765 9999999999


Q ss_pred             EEcCCCcEEEEecCccccccc--c-------hhheeeccCccc
Q 023430          247 LMDSDGHVMAAHSLNSHNQLC--C-------FFFFLFLGGGVF  280 (282)
Q Consensus       247 Ll~~~~~v~l~Dfg~s~~~~~--~-------~~~~~~~ape~~  280 (282)
                      ++|....+|++|||+......  .       .-...|.|||.+
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPell  123 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELL  123 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHh
Confidence            999999999999999875521  1       237789999976

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.16  E-value=3.9e-10  Score=90.63  Aligned_cols=97  Identities=23%  Similarity=0.272  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHhcCCC--CeeeeeEEEEeCCEEEEEEeccC--CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHHC
Q 023430          160 DYMKAERDILTKVTHP--FIVQLRYSFQTRSKLYLILDFIN--GGHLFFHLYRQGIFREDQARFYTAEIVSAVSH-LHKC  234 (282)
Q Consensus       160 ~~~~~E~~~l~~l~h~--nIv~l~~~~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~y-lH~~  234 (282)
                      .+.++|.+.|..+..-  ++.+.+++.    .-+|||||++  |..+..+....  +.......++.+++..+.. +|..
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~  126 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKA  126 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhc
Confidence            3567899999999865  455665442    2379999998  65554433221  1134456677778885555 5799


Q ss_pred             CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          235 GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       235 ~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ||||+||.+.|||++++ .+.++|||-+.
T Consensus       127 givHGDLs~~NIlv~~~-~~~iIDf~qav  154 (188)
T PF01163_consen  127 GIVHGDLSEYNILVDDG-KVYIIDFGQAV  154 (188)
T ss_dssp             TEEESS-STTSEEEETT-CEEE--GTTEE
T ss_pred             CceecCCChhhEEeecc-eEEEEecCcce
Confidence            99999999999999877 99999999774

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.12  E-value=3.7e-10  Score=103.70  Aligned_cols=116  Identities=18%  Similarity=0.279  Sum_probs=94.1

Q ss_pred             CCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHH
Q 023430          139 SDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR  218 (282)
Q Consensus       139 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~  218 (282)
                      .+..|.|........   ...+...+-++-|+.++||||++++..+...+.+|||+|-+.  .|..++.+.+   ...+.
T Consensus        36 ~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~---~~~v~  107 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG---KEEVC  107 (690)
T ss_pred             cCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH---HHHHH
Confidence            445566666654331   334556778889999999999999999999999999999876  4556665533   66677


Q ss_pred             HHHHHHHHHHHHHH-HCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          219 FYTAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       219 ~i~~qi~~gL~ylH-~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ..+.||+.||.||| +++++|++|.-..|+++..|+.||.+|-.+
T Consensus       108 ~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v  152 (690)
T KOG1243|consen  108 LGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELV  152 (690)
T ss_pred             HHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEE
Confidence            77899999999998 678999999999999999999999998665

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.09  E-value=2.7e-09  Score=87.56  Aligned_cols=104  Identities=25%  Similarity=0.256  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHhcCCCCe--eeeeEEEEeC----CEEEEEEeccCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 023430          161 YMKAERDILTKVTHPFI--VQLRYSFQTR----SKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK  233 (282)
Q Consensus       161 ~~~~E~~~l~~l~h~nI--v~l~~~~~~~----~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~  233 (282)
                      ...+|...+..|..-+|  .+.+++....    ...++|+|++++. +|.+++......+......++.+++..+.-||.
T Consensus        57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~  136 (206)
T PF06293_consen   57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHD  136 (206)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH
Confidence            46678877777654333  3344444432    2468999999884 788888764456777788899999999999999


Q ss_pred             CCCEeeccCCCceEEcCCC---cEEEEecCcccc
Q 023430          234 CGIVHRDLKPENILMDSDG---HVMAAHSLNSHN  264 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~---~v~l~Dfg~s~~  264 (282)
                      +||+|+|+++.|||++.++   .+.++||+.++.
T Consensus       137 ~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  137 AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            9999999999999999887   899999987754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.98  E-value=1.4e-08  Score=82.36  Aligned_cols=142  Identities=10%  Similarity=0.092  Sum_probs=98.3

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh---hhHHHHHHHHHHHHHhcCCCC--eeeeeEEEEe----CC
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK---KNHVDYMKAERDILTKVTHPF--IVQLRYSFQT----RS  188 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~----~~  188 (282)
                      -|+|+.+-|++....       +..+-+|.-.......   +.-...|.+|...+..|..-+  +.+....-..    .-
T Consensus        26 ~~rgG~SgV~r~~~~-------g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~   98 (216)
T PRK09902         26 YRRNGMSGVQCVERN-------GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEW   98 (216)
T ss_pred             cCCCCcceEEEEEeC-------CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCce
Confidence            367888889887643       2257777654211111   223456888999988886332  3343311111    12


Q ss_pred             EEEEEEeccCC-CchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc--EEEEecCccc
Q 023430          189 KLYLILDFING-GHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH--VMAAHSLNSH  263 (282)
Q Consensus       189 ~~~lv~e~~~~-g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~--v~l~Dfg~s~  263 (282)
                      .-+||+|-+.| .+|.+++...  ...+......+..+++..+.-||+.|+.|+|+-+.|||++.+|.  |+++||--++
T Consensus        99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902         99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            47899997765 4787777553  23467777889999999999999999999999999999987777  9999998776


Q ss_pred             ccc
Q 023430          264 NQL  266 (282)
Q Consensus       264 ~~~  266 (282)
                      ..+
T Consensus       179 ~~l  181 (216)
T PRK09902        179 RRL  181 (216)
T ss_pred             hhh
Confidence            443

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.91  E-value=1.8e-08  Score=84.00  Aligned_cols=135  Identities=19%  Similarity=0.180  Sum_probs=93.7

Q ss_pred             EEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-----------------hhhhH--HHHHHHHHHHHHhcC
Q 023430          113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-----------------IKKNH--VDYMKAERDILTKVT  173 (282)
Q Consensus       113 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----------------~~~~~--~~~~~~E~~~l~~l~  173 (282)
                      .+...||-|.-+.||.|...      .+..+|||.-+....                 ..+..  +...++|.++|.+|.
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~------~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~  167 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDP------KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLY  167 (304)
T ss_pred             hhccccccCccceEEEEECC------CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhh
Confidence            35678999999999999843      567799996542210                 00111  122457888998887


Q ss_pred             CC--CeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC
Q 023430          174 HP--FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       174 h~--nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~  251 (282)
                      ..  .|.+.+++    +.-.+|||+++|-.|...-     +.......++..|+.-+.-+-..||||+|+.+=|||++++
T Consensus       168 ~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~d  238 (304)
T COG0478         168 PEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTED  238 (304)
T ss_pred             hcCCCCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecC
Confidence            54  56655543    4568999999997664322     1233444455556665655558999999999999999999


Q ss_pred             CcEEEEecCcc
Q 023430          252 GHVMAAHSLNS  262 (282)
Q Consensus       252 ~~v~l~Dfg~s  262 (282)
                      |.+.++||-=+
T Consensus       239 g~~~vIDwPQ~  249 (304)
T COG0478         239 GDIVVIDWPQA  249 (304)
T ss_pred             CCEEEEeCccc
Confidence            99999999633

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.85  E-value=6.7e-08  Score=78.82  Aligned_cols=142  Identities=19%  Similarity=0.221  Sum_probs=91.3

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHH------HHHHHHHHhcC---CCC
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM------KAERDILTKVT---HPF  176 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~------~~E~~~l~~l~---h~n  176 (282)
                      .+..++|.+.+++-......|.+-..       .++.+++|..+......+.....|      .+++..+..+.   --.
T Consensus        27 ~i~~~~~~~~kv~k~~~r~~ValIei-------~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~   99 (229)
T PF06176_consen   27 KILDNNYKIIKVFKNTKRNYVALIEI-------DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTE   99 (229)
T ss_pred             HHHhCCceEEEeecCCCccEEEEEEE-------CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccc
Confidence            34567899999999988888887663       356789998765432222222211      22333333332   222


Q ss_pred             eeeeeEEE-----EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC
Q 023430          177 IVQLRYSF-----QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       177 Iv~l~~~~-----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~  251 (282)
                      ...++.+.     .-....+++|||++|..|.+...    +.+    .+...+.+++.-||..|+.|+|..|.|+++.. 
T Consensus       100 ~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-  170 (229)
T PF06176_consen  100 PADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-  170 (229)
T ss_pred             cccceeeeeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-
Confidence            22222222     12235678999999988755432    232    23456777899999999999999999999985 


Q ss_pred             CcEEEEecCccc
Q 023430          252 GHVMAAHSLNSH  263 (282)
Q Consensus       252 ~~v~l~Dfg~s~  263 (282)
                      +.++++||+..+
T Consensus       171 ~~i~iID~~~k~  182 (229)
T PF06176_consen  171 NGIRIIDTQGKR  182 (229)
T ss_pred             CcEEEEECcccc
Confidence            559999998764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.76  E-value=1.2e-07  Score=85.23  Aligned_cols=133  Identities=17%  Similarity=0.217  Sum_probs=101.2

Q ss_pred             CeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe----CCEEEEEEeccC
Q 023430          123 FGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT----RSKLYLILDFIN  198 (282)
Q Consensus       123 fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv~e~~~  198 (282)
                      -.+.|++...     .++..|++|.+..++.....   ....-++.++++.|.|||++.++|.+    ...+++|++|.+
T Consensus       289 ~~Ttyk~~s~-----~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP  360 (655)
T KOG3741|consen  289 SITTYKATSN-----VDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYP  360 (655)
T ss_pred             cceeEeeeec-----cCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCC
Confidence            3567888765     46677999988544322221   12235678999999999999988873    347999999998


Q ss_pred             CC-chHHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          199 GG-HLFFHLYR---------------QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       199 ~g-~L~~~l~~---------------~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +. +|.++-..               ....+|..++.++.|+..||.++|+.|+.-+-|.+.+||++.+.+++|...|+.
T Consensus       361 ~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~  440 (655)
T KOG3741|consen  361 SSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIM  440 (655)
T ss_pred             CCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccce
Confidence            64 66654421               123578889999999999999999999999999999999999889988876655


Q ss_pred             c
Q 023430          263 H  263 (282)
Q Consensus       263 ~  263 (282)
                      .
T Consensus       441 D  441 (655)
T KOG3741|consen  441 D  441 (655)
T ss_pred             e
Confidence            3

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.73  E-value=8.9e-08  Score=88.14  Aligned_cols=139  Identities=17%  Similarity=0.176  Sum_probs=89.1

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-------------------------------hhHHHH---
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-------------------------------KNHVDY---  161 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------~~~~~~---  161 (282)
                      +.|+.++-|.||+|+.+      +++.||||+.+++....                               .+..+.   
T Consensus       131 ~PiAsASIaQVH~A~L~------sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~  204 (517)
T COG0661         131 EPIASASIAQVHRAVLK------SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE  204 (517)
T ss_pred             CchhhhhHhhheeEEec------CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence            46899999999999986      47889999987643111                               001111   


Q ss_pred             ---HHHHHHHHHhc----C-CCCeeeeeEEEEeCCEEEEEEeccCCCchHHHH--HhcCCCCHHHHHHHHHHHHHHHHHH
Q 023430          162 ---MKAERDILTKV----T-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL--YRQGIFREDQARFYTAEIVSAVSHL  231 (282)
Q Consensus       162 ---~~~E~~~l~~l----~-h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~i~~qi~~gL~yl  231 (282)
                         +.+|...+.++    . .++|.--.-++.-.+.-.|+|||++|-.+.+..  .. ..++...+.....++  -+.-+
T Consensus       205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~--f~~q~  281 (517)
T COG0661         205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRA--FLRQL  281 (517)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHH--HHHHH
Confidence               22344444433    2 344332223334455678999999998886663  33 334433332222221  13333


Q ss_pred             HHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          232 HKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       232 H~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      -..|++|.|..|.||+++.+|++.+.|||+..
T Consensus       282 ~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g  313 (517)
T COG0661         282 LRDGFFHADPHPGNILVRSDGRIVLLDFGIVG  313 (517)
T ss_pred             HhcCccccCCCccceEEecCCcEEEEcCccee
Confidence            45899999999999999999999999999874

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.69  E-value=4.1e-07  Score=75.67  Aligned_cols=133  Identities=16%  Similarity=0.146  Sum_probs=80.4

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC--eeeeeEEEEeCCEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lv  193 (282)
                      ..||+|..+.||+..         +..+++|......     ....+.+|.++++.+..-.  +.+.+++....+...+|
T Consensus         7 ~~i~~G~t~~~y~~~---------~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv   72 (226)
T TIGR02172         7 TQTGEGGNGESYTHK---------TGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLI   72 (226)
T ss_pred             eeecCCCCcceeEec---------CCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeee
Confidence            568999999999731         2246788775432     1234678999998876433  35566776677778899


Q ss_pred             EeccCCCc-hH--------------HHHHh-----c----CCCCHHH-HHHHHH----------HHHH-HHHHHHH----
Q 023430          194 LDFINGGH-LF--------------FHLYR-----Q----GIFREDQ-ARFYTA----------EIVS-AVSHLHK----  233 (282)
Q Consensus       194 ~e~~~~g~-L~--------------~~l~~-----~----~~~~~~~-~~~i~~----------qi~~-gL~ylH~----  233 (282)
                      ||+++|.. +.              ..+.+     +    ....... ...+..          .+.. ...+|..    
T Consensus        73 ~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~  152 (226)
T TIGR02172        73 YELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDT  152 (226)
T ss_pred             eeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCC
Confidence            99999963 11              11111     0    0111110 011100          1111 1222221    


Q ss_pred             CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          234 CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ..++|+|+.|.||++++++ +.++||+.+.
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            2478999999999999888 9999998775

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.69  E-value=3.6e-07  Score=75.50  Aligned_cols=135  Identities=21%  Similarity=0.219  Sum_probs=90.4

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhh---------------------HHHHHHHHHHHHHhcC-
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN---------------------HVDYMKAERDILTKVT-  173 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---------------------~~~~~~~E~~~l~~l~-  173 (282)
                      ..|..|.-+.||+|..      ..+..+|+|+.+.....-+.                     ...+...|...|+++. 
T Consensus        54 g~istGKEA~Vy~a~~------~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~e  127 (268)
T COG1718          54 GCISTGKEANVYLAET------GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYE  127 (268)
T ss_pred             eeecCCcceEEEeecc------CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3688888999999874      24667999998754321111                     1123345777777764 


Q ss_pred             -CCCeeeeeEEEEeCCEEEEEEeccCCCch-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcC
Q 023430          174 -HPFIVQLRYSFQTRSKLYLILDFINGGHL-FFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDS  250 (282)
Q Consensus       174 -h~nIv~l~~~~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~  250 (282)
                       +-.+.+-+.+.    .-.|||||+....+ .-.|.. -.+...++..+..++++.+.-|-. .++||+||..=|||+. 
T Consensus       128 AGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-  201 (268)
T COG1718         128 AGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-  201 (268)
T ss_pred             cCCCCCCceeec----CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-
Confidence             33334444443    24799999865421 111211 122333677888899999988766 8999999999999999 


Q ss_pred             CCcEEEEecCcc
Q 023430          251 DGHVMAAHSLNS  262 (282)
Q Consensus       251 ~~~v~l~Dfg~s  262 (282)
                      ++.+.|+|||=|
T Consensus       202 ~~~p~iID~~Qa  213 (268)
T COG1718         202 DGEPYIIDVSQA  213 (268)
T ss_pred             CCeEEEEECccc
Confidence            899999999966

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.65  E-value=1.2e-06  Score=71.13  Aligned_cols=134  Identities=23%  Similarity=0.242  Sum_probs=91.2

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-------------hhhhHHHHHHHHHHHHHhcC------CCC
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-------------IKKNHVDYMKAERDILTKVT------HPF  176 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~~E~~~l~~l~------h~n  176 (282)
                      ..||+|+.-.||.--        ......||++.....             ......+...+|+.....+.      +.+
T Consensus         7 ~~i~~G~~R~cy~HP--------~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~   78 (199)
T PF10707_consen    7 DLIAQGGERDCYQHP--------DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSH   78 (199)
T ss_pred             cccccCCCceEEECC--------CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccc
Confidence            469999999999532        233468888876550             00112334556665555444      789


Q ss_pred             eeeeeEEEEeCCEEEEEEeccCC------CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC
Q 023430          177 IVQLRYSFQTRSKLYLILDFING------GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS  250 (282)
Q Consensus       177 Iv~l~~~~~~~~~~~lv~e~~~~------g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~  250 (282)
                      |.+++|+.+++-..-+|+|.+..      .+|.+++.. +.+++ ...   ..+-+-.+||-+.+|+.+|++|.||++..
T Consensus        79 i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~  153 (199)
T PF10707_consen   79 IPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQR  153 (199)
T ss_pred             cccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEe
Confidence            99999999999999999998643      267777743 44555 322   33334467888999999999999999964


Q ss_pred             C--C--cEEEEe-cCcc
Q 023430          251 D--G--HVMAAH-SLNS  262 (282)
Q Consensus       251 ~--~--~v~l~D-fg~s  262 (282)
                      .  +  .++|+| ||..
T Consensus       154 ~~~~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  154 RDSGEFRLVLIDGLGEK  170 (199)
T ss_pred             cCCCceEEEEEeCCCCc
Confidence            3  2  477887 5544

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.63  E-value=5.1e-07  Score=74.88  Aligned_cols=137  Identities=23%  Similarity=0.331  Sum_probs=78.4

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC--eeeeeEEEE---eCCE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF--IVQLRYSFQ---TRSK  189 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~---~~~~  189 (282)
                      ++.|+.|..+.||++...       ++.+++|.....     .....+.+|..+++.+....  +.+++....   ....
T Consensus         2 i~~l~~G~~n~~~~v~~~-------~~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~   69 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTD-------DGRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGF   69 (239)
T ss_dssp             EEEEEESSSSEEEEEEET-------TSEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSE
T ss_pred             CccCCCCCeeeEEEEEEC-------CcEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccccccc
Confidence            467899999999998854       247899987543     23345677888888775332  445555332   2345


Q ss_pred             EEEEEeccCCCchHH----------------HHH---hc--C--CCCHHH---------HHHH------------HHHHH
Q 023430          190 LYLILDFINGGHLFF----------------HLY---RQ--G--IFREDQ---------ARFY------------TAEIV  225 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~----------------~l~---~~--~--~~~~~~---------~~~i------------~~qi~  225 (282)
                      .+++|++++|..+..                .+.   ..  .  .+....         ....            ...+.
T Consensus        70 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (239)
T PF01636_consen   70 PYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELE  149 (239)
T ss_dssp             EEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             ceEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHH
Confidence            799999999987665                111   11  0  011000         0000            01112


Q ss_pred             H-HHHHHHH-------CCCEeeccCCCceEEc-CCCcEEEEecCccc
Q 023430          226 S-AVSHLHK-------CGIVHRDLKPENILMD-SDGHVMAAHSLNSH  263 (282)
Q Consensus       226 ~-gL~ylH~-------~~iiHrDlKp~NILl~-~~~~v~l~Dfg~s~  263 (282)
                      . .+..++.       ..++|+|+.+.|||++ .++.+-|+||+.+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  150 ERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             HHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence            2 2333332       3499999999999999 66667799998775

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.62  E-value=4.5e-08  Score=83.24  Aligned_cols=90  Identities=23%  Similarity=0.459  Sum_probs=76.9

Q ss_pred             HHHhcCCCCeeeeeEEEEeC-----CEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC--C
Q 023430          168 ILTKVTHPFIVQLRYSFQTR-----SKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCG--I  236 (282)
Q Consensus       168 ~l~~l~h~nIv~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~--i  236 (282)
                      -|-.+.|.|||+++.+|.+.     ....++.|||..|+|.++|++    +..+......+|+.||+.||.|||++.  |
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi  199 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI  199 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence            34456799999999888654     358899999999999998875    345777888899999999999999886  9


Q ss_pred             EeeccCCCceEEcCCCcEEEE
Q 023430          237 VHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       237 iHrDlKp~NILl~~~~~v~l~  257 (282)
                      +|+++..+-|++..+|-+|+.
T Consensus       200 ihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             ccCCcchhheeecCCceEEec
Confidence            999999999999999988876

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.59  E-value=1.4e-06  Score=70.35  Aligned_cols=128  Identities=24%  Similarity=0.349  Sum_probs=88.8

Q ss_pred             CCeEEEeeeCcCCC-eEEEEEEEcCCCCCCCCcEEEEEEeechhhh---------h--h-------hHHHHHHHHHHHHH
Q 023430          110 GDFEIFRVVGQGAF-GKVFQVKKKGVDDGDSDGIYAMKVMRKDTII---------K--K-------NHVDYMKAERDILT  170 (282)
Q Consensus       110 ~~y~~~~~lG~G~f-g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---------~--~-------~~~~~~~~E~~~l~  170 (282)
                      .+++.++.||.|.- |.||+++..       +..||+|+.+.-...         .  .       ....-|..|.+...
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~-------g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfg  109 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID-------GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFG  109 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC-------CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhH
Confidence            57999999999999 999999854       568999993321000         0  0       22334677877766


Q ss_pred             hcC---CCCe--eeeeEEEEeC------------------CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHH
Q 023430          171 KVT---HPFI--VQLRYSFQTR------------------SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA  227 (282)
Q Consensus       171 ~l~---h~nI--v~l~~~~~~~------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~g  227 (282)
                      +|+   +.++  |+.+|++.-.                  ....||.||.+...         .+...    -+.+|++-
T Consensus       110 RLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~----~~~~~~~d  176 (207)
T PF13095_consen  110 RLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIR----DIPQMLRD  176 (207)
T ss_pred             HHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchh----HHHHHHHH
Confidence            654   5566  8888887432                  12457888776543         12222    34577888


Q ss_pred             HHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          228 VSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       228 L~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      |..+|..||+-+|+|+.|..   +|  +|+|||.+
T Consensus       177 l~~~~k~gI~~~Dv~~~ny~---~G--~lvDfs~~  206 (207)
T PF13095_consen  177 LKILHKLGIVPRDVKPRNYR---GG--KLVDFSSS  206 (207)
T ss_pred             HHHHHHCCeeeccCcccccc---CC--EEEecccC
Confidence            99999999999999999987   22  88999864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.58  E-value=4.9e-09  Score=100.61  Aligned_cols=148  Identities=30%  Similarity=0.390  Sum_probs=114.7

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      .++.+.+.+-+-+|.++.++.++..+     .+...++|+............+...++-.++-...+|-+++....+...
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~-----sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~r  876 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAG-----SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCR  876 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccc-----cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCC
Confidence            45678888888999999999876553     3334555555444333333344455555555555678888766666677


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      ...+|+|+|+.+++|...++.-+..++.-++.+...+..+++|||...++|||+||.|+|+..+|+.+++|||
T Consensus       877 sP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~  949 (1205)
T KOG0606|consen  877 SPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFG  949 (1205)
T ss_pred             CCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccc
Confidence            7899999999999999999887777777778888889999999999999999999999999999999999997

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.52  E-value=1.7e-06  Score=72.67  Aligned_cols=134  Identities=12%  Similarity=0.041  Sum_probs=79.0

Q ss_pred             eeCcCCC-eEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEEEE
Q 023430          117 VVGQGAF-GKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLIL  194 (282)
Q Consensus       117 ~lG~G~f-g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~  194 (282)
                      .|-.|.. ..||+....       +..+.+|+.....      ...+.+|+++++.+. +--+.+++++....+..++||
T Consensus         5 ~~~~g~~~~~v~~~~~~-------~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   71 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-------NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLT   71 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-------CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEE
Confidence            3445555 788987532       2357788765432      123567888888875 334556777776666789999


Q ss_pred             eccCCCchHHHH----------------HhcCCC-------CHH--HHHHHHH--------------------HHHHHHH
Q 023430          195 DFINGGHLFFHL----------------YRQGIF-------RED--QARFYTA--------------------EIVSAVS  229 (282)
Q Consensus       195 e~~~~g~L~~~l----------------~~~~~~-------~~~--~~~~i~~--------------------qi~~gL~  229 (282)
                      |+++|.+|....                .+-..+       ...  .......                    .+...+.
T Consensus        72 e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (244)
T cd05150          72 SAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYA  151 (244)
T ss_pred             EeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHH
Confidence            999987664321                000001       100  0000000                    0111122


Q ss_pred             HHH-------HCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          230 HLH-------KCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       230 ylH-------~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .|-       ...++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       152 ~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         152 ELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             HHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            221       1248999999999999997778899998874

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=98.40  E-value=5.8e-06  Score=81.42  Aligned_cols=82  Identities=12%  Similarity=0.250  Sum_probs=54.7

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCe--eeeeEEEEeC---C
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFI--VQLRYSFQTR---S  188 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI--v~l~~~~~~~---~  188 (282)
                      ++.++.|.+..+|+......   .....+++|+........  ....+.+|..+|+.+. |.+|  .+++.++.+.   +
T Consensus        43 v~~l~gG~sn~ty~l~~~~~---~~~~~~VLR~~p~~~~~~--~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G  117 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNG---GSVKRYVLRKKPPGKLLQ--SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIG  117 (822)
T ss_pred             EEEeCCCCcCceEEEEECCC---CcceeEEEEeCCCCccCc--cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCC
Confidence            56789999999998875421   112357777664432111  1234778999999996 6665  6666666543   4


Q ss_pred             EEEEEEeccCCCc
Q 023430          189 KLYLILDFINGGH  201 (282)
Q Consensus       189 ~~~lv~e~~~~g~  201 (282)
                      ..|+||||++|..
T Consensus       118 ~~flVME~v~G~~  130 (822)
T PLN02876        118 TAFYIMEYLEGRI  130 (822)
T ss_pred             CceEEEEecCCcc
Confidence            6789999999864

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.37  E-value=3.9e-06  Score=77.37  Aligned_cols=142  Identities=14%  Similarity=0.163  Sum_probs=87.7

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh----------------------------hhHHHH------
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK----------------------------KNHVDY------  161 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------------~~~~~~------  161 (282)
                      +.||.-+.|.||+|+.+      .+..||||+-++.....                            .+..+.      
T Consensus       167 ~piaaASlaQVhrA~L~------~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD  240 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLK------NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD  240 (538)
T ss_pred             chhhhcchhheEEEEec------CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence            56999999999999987      36779999876542110                            011111      


Q ss_pred             HHHHHHH----HHhcCCCC------eeeeeEEEEeCCEEEEEEeccCCCchH--HHHHhcCCCCHHHHHHHHHHHHHHHH
Q 023430          162 MKAERDI----LTKVTHPF------IVQLRYSFQTRSKLYLILDFINGGHLF--FHLYRQGIFREDQARFYTAEIVSAVS  229 (282)
Q Consensus       162 ~~~E~~~----l~~l~h~n------Iv~l~~~~~~~~~~~lv~e~~~~g~L~--~~l~~~~~~~~~~~~~i~~qi~~gL~  229 (282)
                      |.+|++.    .+.+.|-+      |.++|..+  .....|+||||+|..+.  +.+.+.+ ++...+...+.+..  +.
T Consensus       241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~g-i~~~~i~~~l~~~~--~~  315 (538)
T KOG1235|consen  241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRG-ISPHDILNKLVEAY--LE  315 (538)
T ss_pred             hHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHcC-CCHHHHHHHHHHHH--HH
Confidence            1223322    23344555      33333322  34578999999998664  4454444 44444433333322  22


Q ss_pred             HHHHCCCEeeccCCCceEEcC----CCcEEEEecCcccccccc
Q 023430          230 HLHKCGIVHRDLKPENILMDS----DGHVMAAHSLNSHNQLCC  268 (282)
Q Consensus       230 ylH~~~iiHrDlKp~NILl~~----~~~v~l~Dfg~s~~~~~~  268 (282)
                      -+-..|++|.|-.|.||++..    ++.+++-|||+.....+.
T Consensus       316 qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  316 QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             HHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence            233568999999999999984    678999999998654433

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.37  E-value=3.7e-06  Score=66.03  Aligned_cols=129  Identities=18%  Similarity=0.254  Sum_probs=88.5

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeee-eeEEEEeCCEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQ-LRYSFQTRSKL  190 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~~~~~~  190 (282)
                      ....+.|++|++|.||++.|++       ..+|+|+-+.+.     .+..+..|+++|..++-.++.. +|.+-    .-
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~~-------~~~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~yg----~~   87 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWRG-------GEVALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFYG----ED   87 (201)
T ss_pred             hhhhhhhhcccccEEEEeeccC-------ceEEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEec----hh
Confidence            3445789999999999999873       368899865543     3345788999999888666543 44432    23


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccC-CCceEEcCCCcEEEEecCccc
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLK-PENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlK-p~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ++.|||+.|-.|.......   ...++    ..+++.---|-..||-|..|. |..++|..++.+.|+||--++
T Consensus        88 ~i~me~i~G~~L~~~~~~~---~rk~l----~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112          88 FIRMEYIDGRPLGKLEIGG---DRKHL----LRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             hhhhhhhcCcchhhhhhcc---cHHHH----HHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence            5669999998886554321   22222    234444334556789999886 666666677799999998776

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.14  E-value=1.3e-05  Score=67.06  Aligned_cols=29  Identities=21%  Similarity=0.133  Sum_probs=24.7

Q ss_pred             CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          235 GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       235 ~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +++|+|+.+.|||++.++-..|+||+.+.
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            48999999999999866555799999874

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.11  E-value=1.6e-05  Score=64.19  Aligned_cols=95  Identities=15%  Similarity=0.145  Sum_probs=75.4

Q ss_pred             HHHHHHHhcCC-CCeeeeeEEEEeCCEEEEEEeccCCCchHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCC
Q 023430          164 AERDILTKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLFFH---LYRQGIFREDQARFYTAEIVSAVSHLHK---CGI  236 (282)
Q Consensus       164 ~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~---l~~~~~~~~~~~~~i~~qi~~gL~ylH~---~~i  236 (282)
                      .|.-+|+.+.+ +++.+++|++-    -+++.||...+++...   +...-..++.....++.++++.+.+++.   ..+
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~   83 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF   83 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence            47788888886 69999999883    3678999987755321   1111235789999999999999999986   347


Q ss_pred             EeeccCCCceEEcCCCcEEEEecCcc
Q 023430          237 VHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       237 iHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .-.|++++|+-++++|++|++|....
T Consensus        84 ~lcDv~~~nfgv~~~~~lk~iDld~v  109 (188)
T PF12260_consen   84 YLCDVSPDNFGVNDDGRLKLIDLDDV  109 (188)
T ss_pred             EEeecchHHeEEeCCCcEEEEechhc
Confidence            77999999999999999999998644

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK10593 hypothetical protein; Provisional

Probab=98.04  E-value=0.00013  Score=63.18  Aligned_cols=78  Identities=9%  Similarity=0.075  Sum_probs=52.3

Q ss_pred             EEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC---CCeeeeeEEEEe---
Q 023430          113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH---PFIVQLRYSFQT---  186 (282)
Q Consensus       113 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~---  186 (282)
                      .-.+.||.|..+.||+....       +..+.+|..+...     ....+..|...|+.+.-   -.+.++++.+..   
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~-------~~~~~~k~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~   84 (297)
T PRK10593         17 SRVECISEQPYAALWALYDS-------QGNPMPLMARSFS-----TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQS   84 (297)
T ss_pred             heeeecCCccceeEEEEEcC-------CCCEEEEEecccc-----cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCc
Confidence            34567999999999987522       2236667643210     11347789999988853   356677776643   


Q ss_pred             CCEEEEEEeccCCCch
Q 023430          187 RSKLYLILDFINGGHL  202 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L  202 (282)
                      .+..+||||+++|+++
T Consensus        85 ~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         85 PGPDVLLLERLRGVSV  100 (297)
T ss_pred             CCCeEEEEeccCCEec
Confidence            3668999999998654

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.02  E-value=0.00024  Score=63.87  Aligned_cols=79  Identities=13%  Similarity=0.168  Sum_probs=51.4

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh--h--hhHHHHHHHHHHHHHhcC---CCCeeeeeEEEEeC
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII--K--KNHVDYMKAERDILTKVT---HPFIVQLRYSFQTR  187 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~--~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~  187 (282)
                      .+.||.|.+..||++...     ..++.++||.-......  .  ....++...|.+.|+.+.   ..++.+++.+  +.
T Consensus        31 ~~elggGn~N~VyrV~~~-----~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~  103 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDT-----EGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DE  103 (401)
T ss_pred             eeEcCCCceEEEEEEEeC-----CCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CC
Confidence            467999999999999854     11236899975422110  1  123455677888887763   2456666655  34


Q ss_pred             CEEEEEEeccCCC
Q 023430          188 SKLYLILDFINGG  200 (282)
Q Consensus       188 ~~~~lv~e~~~~g  200 (282)
                      ...++||||+++.
T Consensus       104 ~~~~lVME~L~~~  116 (401)
T PRK09550        104 ELAVTVMEDLSDH  116 (401)
T ss_pred             CCCEEEEecCCCc
Confidence            5578999999864

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.01  E-value=8.6e-07  Score=81.73  Aligned_cols=151  Identities=17%  Similarity=0.129  Sum_probs=105.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC-eeeeeEEEEeCCE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF-IVQLRYSFQTRSK  189 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~  189 (282)
                      .+.....+++|+++++++.+..      ..+....+.+...        ....-++++|.+++||| .+..++.+..+..
T Consensus       243 ws~~fh~fvK~altknpKkRpt------aeklL~h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~  308 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPT------AEKLLQHPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDY  308 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCC------hhhheeceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccc
Confidence            3555667899999999987633      1222335544322        22455889999999999 7778888888889


Q ss_pred             EEEEEeccCCC-ch-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          190 LYLILDFINGG-HL-FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       190 ~~lv~e~~~~g-~L-~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      .+++|+++.++ +- ...-...-.+.+.+...+.+.-+++|+|+|+---+|||    |||..+ +.++..||+.....- 
T Consensus       309 ~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~  383 (829)
T KOG0576|consen  309 LWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTR  383 (829)
T ss_pred             cchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCc
Confidence            99999999887 22 11111111234445556677778899999988778998    777754 788999998775322 


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...+++.|||||+.
T Consensus       384 ~~~~~t~~~~~~~~~pev~  402 (829)
T KOG0576|consen  384 TMKPRTAIGTPEPLAPEVI  402 (829)
T ss_pred             ccccccCCCCCCCCCchhh
Confidence                 22679999999964

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.95  E-value=6.4e-05  Score=65.00  Aligned_cols=139  Identities=17%  Similarity=0.181  Sum_probs=80.5

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC--eeeeeE------E
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF--IVQLRY------S  183 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~------~  183 (282)
                      ..-.+.|..|....+|+....       +..+++|+....      ....+..|+.++..+.+.+  +.+++.      .
T Consensus        16 ~~~i~~i~~G~~n~~y~v~~~-------~~~~vLr~~~~~------~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~   82 (296)
T cd05153          16 LLSFEGISAGIENTNYFVTTD-------SGRYVLTLFEKV------SAEELPFFLALLDHLAERGLPVPRPIADRDGEYL   82 (296)
T ss_pred             hhheecccCccccceEEEEeC-------CCcEEEEEcCCC------ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEe
Confidence            333567888888899987632       235888987531      1233556777777775322  334332      1


Q ss_pred             EEeCCEEEEEEeccCCCchHH-----------HH---Hhc-CCCC--------HHHHH------------HHHHHHHHHH
Q 023430          184 FQTRSKLYLILDFINGGHLFF-----------HL---YRQ-GIFR--------EDQAR------------FYTAEIVSAV  228 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~-----------~l---~~~-~~~~--------~~~~~------------~i~~qi~~gL  228 (282)
                      ....+..++|++|++|..+..           .+   +.. ..+.        .....            .....+...+
T Consensus        83 ~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  162 (296)
T cd05153          83 SELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADEL  162 (296)
T ss_pred             eeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHH
Confidence            233456789999999865411           11   100 0000        00000            0111123334


Q ss_pred             HHHHH-------CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          229 SHLHK-------CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       229 ~ylH~-------~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .++-.       .+++|+|+.|.|||+++++.+.|+||..+.
T Consensus       163 ~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         163 ARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             HHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            44443       369999999999999987777899998775

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.85  E-value=0.00033  Score=58.41  Aligned_cols=76  Identities=25%  Similarity=0.277  Sum_probs=45.2

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC-eeeeeEEEEeCCEEEEE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF-IVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lv  193 (282)
                      ++.|..|-...+|++....    ..++.|++|+.......   . -...+|+.+++.+...+ ..++++.+.  +  .++
T Consensus         3 i~~l~gG~tN~~~~v~~~~----~~~~~~vlR~~~~~~~~---~-~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l   70 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKE----DNQDAVLVRVYGNKTEL---I-IDRERELRIHKLLSKHGLAPKLYATFQ--N--GLI   70 (235)
T ss_pred             EEEcCCcccceEEEEEcCC----CCCCeEEEEEccCCccc---e-ecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEE
Confidence            3567888889999886321    02356888876543211   0 11246888888875333 344544332  2  479


Q ss_pred             EeccCCCch
Q 023430          194 LDFINGGHL  202 (282)
Q Consensus       194 ~e~~~~g~L  202 (282)
                      |||++|.++
T Consensus        71 ~e~i~G~~l   79 (235)
T cd05157          71 YEFIPGRTL   79 (235)
T ss_pred             EEeeCCCcC
Confidence            999998654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.84  E-value=0.00028  Score=61.47  Aligned_cols=142  Identities=18%  Similarity=0.225  Sum_probs=80.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC--eeeeeEE----
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF--IVQLRYS----  183 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~----  183 (282)
                      +....++.++.|.-..+|++...       ++.+++|+.....     ..+.+..|.+++..|....  +.+++..    
T Consensus        22 ~~~~~i~~~~~G~~n~~y~v~t~-------~~~~vLK~~~~~~-----~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~   89 (307)
T TIGR00938        22 GELLSLKGIAEGVENSNYLLTTD-------VGRYILTLYEKRV-----KAEELPFFLALTTHLAARGLPVPKPVKSRDGR   89 (307)
T ss_pred             CCceeccccCCccccceEEEEeC-------CCcEEEEEecCCC-----CHHHHHHHHHHHHHHHHCCCCCCccccCCCCC
Confidence            34555677888888899987632       2347888765421     1123445666666664222  3333221    


Q ss_pred             --EEeCCEEEEEEeccCCCchH-----------HHH---Hhc-CCC--------CHH---HH--H----------HHHHH
Q 023430          184 --FQTRSKLYLILDFINGGHLF-----------FHL---YRQ-GIF--------RED---QA--R----------FYTAE  223 (282)
Q Consensus       184 --~~~~~~~~lv~e~~~~g~L~-----------~~l---~~~-~~~--------~~~---~~--~----------~i~~q  223 (282)
                        ....+..++++||++|..+.           ..+   +.. ..+        ...   ..  .          .....
T Consensus        90 ~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~  169 (307)
T TIGR00938        90 QLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAE  169 (307)
T ss_pred             eehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHH
Confidence              12245678999999885421           111   110 001        000   00  0          00112


Q ss_pred             HHHHHHHHHH-------CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          224 IVSAVSHLHK-------CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       224 i~~gL~ylH~-------~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +...++++..       .+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus       170 l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       170 LDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             HHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            3334555532       579999999999999988867899999885

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.82  E-value=0.00014  Score=61.54  Aligned_cols=131  Identities=11%  Similarity=0.151  Sum_probs=72.0

Q ss_pred             eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-eeeeEEEEeCCEEEEEEec
Q 023430          118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-VQLRYSFQTRSKLYLILDF  196 (282)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~e~  196 (282)
                      +..|-.+.+|+...       .+..+++|+.......-  .. ...+|..+++.+....+ .+++...  .  -++||||
T Consensus         4 ~~~G~tn~~y~~~~-------~~~~~vlR~~~~~~~~~--~~-~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~   69 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-------PGISFVWRPQSPVCKAL--GV-DRQREYQILQALSALGLAPKPILVN--E--HWLLVEW   69 (256)
T ss_pred             CCCcCcCCeEEEEe-------CCccEEEeeCCcccccc--cC-cHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEe
Confidence            45677788888762       23457788754322110  01 13568888888764333 2333332  2  3689999


Q ss_pred             cCCCchHH--------------HHHh---cC----CCCH-HHHHHHHHHH---------HHHHHHHHH--------CCCE
Q 023430          197 INGGHLFF--------------HLYR---QG----IFRE-DQARFYTAEI---------VSAVSHLHK--------CGIV  237 (282)
Q Consensus       197 ~~~g~L~~--------------~l~~---~~----~~~~-~~~~~i~~qi---------~~gL~ylH~--------~~ii  237 (282)
                      ++|..+..              .+.+   ..    .+.. ..+..+..++         ...+..+-.        ..++
T Consensus        70 i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  149 (256)
T TIGR02721        70 LEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPL  149 (256)
T ss_pred             ccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeee
Confidence            99865421              1111   11    1111 1112221111         111222222        2489


Q ss_pred             eeccCCCceEEcCCCcEEEEecCccc
Q 023430          238 HRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       238 HrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      |+|+.|.|||++.++ +.++||..+.
T Consensus       150 H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       150 HMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             cCCCCcCcEEEeCCC-CEEEeccccC
Confidence            999999999999877 7899998775

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.69  E-value=0.00045  Score=60.63  Aligned_cols=139  Identities=18%  Similarity=0.298  Sum_probs=91.8

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh----------------------hhHH-HHHHHHHHHHHh
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK----------------------KNHV-DYMKAERDILTK  171 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------~~~~-~~~~~E~~~l~~  171 (282)
                      -..|..|.-+.||.|..      ..+..+|||+.+-....-                      +..+ -+...|++.|++
T Consensus       149 nGCiSTGKEANVYHat~------~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkR  222 (520)
T KOG2270|consen  149 NGCISTGKEANVYHATE------EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKR  222 (520)
T ss_pred             ccccccCccceeEeeec------CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHH
Confidence            35688899999999863      356669999886322110                      1111 123457778888


Q ss_pred             cCCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCCEeeccCCCceEEcC
Q 023430          172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL-HKCGIVHRDLKPENILMDS  250 (282)
Q Consensus       172 l~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~yl-H~~~iiHrDlKp~NILl~~  250 (282)
                      +....|..---....  .-.|||+|+.......-..+.-.++...+..+-.|++.-|.-| +.+++||.||.-=|+|+. 
T Consensus       223 l~~aGIP~PePIlLk--~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-  299 (520)
T KOG2270|consen  223 LNNAGIPCPEPILLK--NHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-  299 (520)
T ss_pred             HHhcCCCCCCceeee--cceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE-
Confidence            876554332211111  2478999997533322222334577778888888888888766 578999999999999984 


Q ss_pred             CCcEEEEecCcc
Q 023430          251 DGHVMAAHSLNS  262 (282)
Q Consensus       251 ~~~v~l~Dfg~s  262 (282)
                      +|.+.|+|-+=|
T Consensus       300 dG~lyiIDVSQS  311 (520)
T KOG2270|consen  300 DGKLYIIDVSQS  311 (520)
T ss_pred             CCEEEEEEcccc
Confidence            789999998766

>PRK05231 homoserine kinase; Provisional

Probab=97.67  E-value=0.0016  Score=56.99  Aligned_cols=30  Identities=23%  Similarity=0.305  Sum_probs=25.7

Q ss_pred             CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          234 CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .++||+|+.+.|||++.+....|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            379999999999999866555799999885

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.49  E-value=0.0014  Score=56.83  Aligned_cols=79  Identities=15%  Similarity=0.130  Sum_probs=44.8

Q ss_pred             eeeCcCCCeEEEEEEEcCC-CCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-eeeeEEEEeCCEEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGV-DDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-VQLRYSFQTRSKLYLI  193 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~-~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv  193 (282)
                      +.|..|-...+|++..... .....++.+++|+......    ......+|..+++.+....+ .++++.+. +   .+|
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v   75 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE----LLIDRERELVVFARLSERNLGPKLYGIFP-N---GRI   75 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc----ceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cch
Confidence            4566677778898764310 0011245688898654321    11124568888877753333 34555443 2   368


Q ss_pred             EeccCCCch
Q 023430          194 LDFINGGHL  202 (282)
Q Consensus       194 ~e~~~~g~L  202 (282)
                      +||++|..+
T Consensus        76 ~e~i~G~~l   84 (302)
T cd05156          76 EEFIPSRTL   84 (302)
T ss_pred             hheeCCCcC
Confidence            999988654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.44  E-value=0.00049  Score=61.20  Aligned_cols=150  Identities=16%  Similarity=0.174  Sum_probs=96.4

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHH-hcCCCCeee--------eeEEEE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT-KVTHPFIVQ--------LRYSFQ  185 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~-~l~h~nIv~--------l~~~~~  185 (282)
                      .+.||+|+-+.+|-.-..       +. .+.|+..........      ..+..|. .-.||-+-.        ++|. .
T Consensus        16 gr~LgqGgea~ly~l~e~-------~d-~VAKIYh~Pppa~~a------qk~a~la~~p~~p~~~~rvaWPqa~L~G~-~   80 (637)
T COG4248          16 GRPLGQGGEADLYTLGEV-------RD-QVAKIYHAPPPAAQA------QKVAELAATPDAPLLNYRVAWPQATLHGG-R   80 (637)
T ss_pred             CccccCCccceeeecchh-------hc-hhheeecCCCchHHH------HHHHHhccCCCCcchhhhhcccHHHhhCC-C
Confidence            467999999999954311       11 345666543211111      1122222 234554332        1111 1


Q ss_pred             eCCEEEEEEeccCCCc-hHHHHH---hc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEe
Q 023430          186 TRSKLYLILDFINGGH-LFFHLY---RQ---GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~-L~~~l~---~~---~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                      .....-++|..+.|.. +..+..   +.   ....+..+++.++.++.+..-||+.|-+-+|+.++|+|+.+++.|.|.|
T Consensus        81 ~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVd  160 (637)
T COG4248          81 RGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVD  160 (637)
T ss_pred             ccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEc
Confidence            1223667888877652 222221   12   3367889999999999999999999999999999999999999999995


Q ss_pred             ---cCccc---ccccchhheeeccCcc
Q 023430          259 ---SLNSH---NQLCCFFFFLFLGGGV  279 (282)
Q Consensus       259 ---fg~s~---~~~~~~~~~~~~ape~  279 (282)
                         |.++.   .-.|-.|...|..||.
T Consensus       161 sDsfqi~~ng~~~~cpVg~~eftPPEl  187 (637)
T COG4248         161 SDSFQINANGTLHLCPVGVSEFTPPEL  187 (637)
T ss_pred             ccceeeccCCceEecccCccccCCHHH
Confidence               66553   3455588899999985

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.39  E-value=0.0035  Score=55.40  Aligned_cols=76  Identities=16%  Similarity=0.189  Sum_probs=46.9

Q ss_pred             eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh----hhhHHHHHHHHHHHHHhcC--CC-CeeeeeEEEEeCCE
Q 023430          117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII----KKNHVDYMKAERDILTKVT--HP-FIVQLRYSFQTRSK  189 (282)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~--h~-nIv~l~~~~~~~~~  189 (282)
                      .||.|....||++...     ..++.++||.-......    -+-..++...|...|+...  -| .+.++|.+  +...
T Consensus         2 EigdGnlN~VfrV~~~-----~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~   74 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQ-----EGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEM   74 (370)
T ss_pred             cCCCCceEEEEEEEcC-----CCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--cccc
Confidence            5799999999999842     12246889875432211    1223445566888887664  34 34445433  4455


Q ss_pred             EEEEEeccCC
Q 023430          190 LYLILDFING  199 (282)
Q Consensus       190 ~~lv~e~~~~  199 (282)
                      ..+|||+++.
T Consensus        75 ~~~vMEdL~~   84 (370)
T TIGR01767        75 AVTVMEDLSH   84 (370)
T ss_pred             ceehHhhCcc
Confidence            6799999865

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.32  E-value=0.00022  Score=61.57  Aligned_cols=133  Identities=12%  Similarity=0.162  Sum_probs=86.0

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-----------------hhhhHHHH--HHHHHHHHHhc
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-----------------IKKNHVDY--MKAERDILTKV  172 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----------------~~~~~~~~--~~~E~~~l~~l  172 (282)
                      +.++.+||-|.-+.||.+-..      .+...++|+-+....                 ..+..+.+  ..+|...|+.|
T Consensus        94 ~svGnqIGVGKESDIY~v~d~------~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL  167 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADE------EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKAL  167 (465)
T ss_pred             hhhccccccccccceEEEecC------CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHH
Confidence            456778999999999988643      355677775432111                 01112222  23577888877


Q ss_pred             C-CCC-eeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC
Q 023430          173 T-HPF-IVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS  250 (282)
Q Consensus       173 ~-h~n-Iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~  250 (282)
                      . |.. |.+.++    .+.-++|||++.|-.|.+.-.-   ...   ..+...+..-+.-|-.+|+||+|..-=||++++
T Consensus       168 ~e~gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v---~d~---~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~d  237 (465)
T KOG2268|consen  168 YERGFPVPKPID----HNRHCVVMELVDGYPLRQVRHV---EDP---PTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKD  237 (465)
T ss_pred             HHcCCCCCCccc----ccceeeHHHhhcccceeeeeec---CCh---HHHHHHHHHHHHHHHHcCceecccchheeEEec
Confidence            5 322 223333    3467899999998776543211   122   223334444456677899999999999999999


Q ss_pred             CCcEEEEecC
Q 023430          251 DGHVMAAHSL  260 (282)
Q Consensus       251 ~~~v~l~Dfg  260 (282)
                      ++.++++||-
T Consensus       238 d~~i~vIDFP  247 (465)
T KOG2268|consen  238 DDKIVVIDFP  247 (465)
T ss_pred             CCCEEEeech
Confidence            9999999995

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.31  E-value=0.0031  Score=54.12  Aligned_cols=29  Identities=34%  Similarity=0.492  Sum_probs=24.6

Q ss_pred             CCEeeccCCCceEEcCCCcE-EEEecCccc
Q 023430          235 GIVHRDLKPENILMDSDGHV-MAAHSLNSH  263 (282)
Q Consensus       235 ~iiHrDlKp~NILl~~~~~v-~l~Dfg~s~  263 (282)
                      .++|+|+.+.|||++.++.+ -|.||+.+.
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            48999999999999976664 699999875

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.29  E-value=0.0053  Score=53.45  Aligned_cols=29  Identities=21%  Similarity=0.284  Sum_probs=27.0

Q ss_pred             CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          235 GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       235 ~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .++|+|+.+.||+++.++.+-+.||+++.
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~  227 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELAT  227 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence            48999999999999999999999999885

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.26  E-value=0.007  Score=52.59  Aligned_cols=29  Identities=24%  Similarity=0.293  Sum_probs=25.6

Q ss_pred             CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          234 CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .+++|+|+.+.|||++. +.+.++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            47899999999999987 778999999764

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.25  E-value=0.0059  Score=54.93  Aligned_cols=77  Identities=12%  Similarity=0.094  Sum_probs=48.3

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh----hHHHHHHHHHHHHHhcC---CCCeeeeeEEEEe
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK----NHVDYMKAERDILTKVT---HPFIVQLRYSFQT  186 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~  186 (282)
                      ..+.||.|.-..||+....       ++.++||.-........    ....+-..|...|+.+.   ...+.+++.+.. 
T Consensus        36 ~~~eiggGn~N~VyrV~~~-------~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de-  107 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS-------SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR-  107 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC-------CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC-
Confidence            3567899999999997742       23488887652221100    12333445666676654   246777777665 


Q ss_pred             CCEEEEEEeccCC
Q 023430          187 RSKLYLILDFING  199 (282)
Q Consensus       187 ~~~~~lv~e~~~~  199 (282)
                       +..+++||++++
T Consensus       108 -d~~vlvME~L~~  119 (418)
T PLN02756        108 -TMALIGMRYLEP  119 (418)
T ss_pred             -CCCEEEEeecCC
Confidence             446788999976

>PLN02236 choline kinase

Probab=97.01  E-value=0.015  Score=51.46  Aligned_cols=143  Identities=17%  Similarity=0.183  Sum_probs=79.4

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCee-eeeEEEEeCCE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIV-QLRYSFQTRSK  189 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~  189 (282)
                      ...+ +.|-.|-...+|++...... ....+.|++|+.....   ....++ .+|..+++.+..-++. ++++.+.. + 
T Consensus        38 ~~~i-~~l~gGlTN~~y~v~~~~~~-~~~~~~~v~Ri~g~~t---~~~idR-~~E~~~~~~l~~~gl~P~~~~~~~~-g-  109 (344)
T PLN02236         38 ALQV-IPLKGAMTNEVFQIKWPTKE-GNLGRKVLVRIYGEGV---ELFFDR-DDEIRTFECMSRHGQGPRLLGRFPN-G-  109 (344)
T ss_pred             cEEE-EEcCCcccceeEEEEeCCCC-CCCCCeEEEEEccCCC---Ceeech-HHHHHHHHHHHHcCCCCceEEEECC-c-
Confidence            3444 45555888899998754211 1133568888775532   122222 4588888877644443 45565532 2 


Q ss_pred             EEEEEeccCCCchHH--------------HHH---hcC----C-C-CHHHHHHHHHHH-----------------HHHHH
Q 023430          190 LYLILDFINGGHLFF--------------HLY---RQG----I-F-REDQARFYTAEI-----------------VSAVS  229 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~--------------~l~---~~~----~-~-~~~~~~~i~~qi-----------------~~gL~  229 (282)
                        .|+||+++.+|..              .+.   ...    . . ...++..+..++                 ...+.
T Consensus       110 --~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~  187 (344)
T PLN02236        110 --RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEIN  187 (344)
T ss_pred             --eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHH
Confidence              5789988766521              111   100    0 1 122233332211                 11111


Q ss_pred             HH----H----HCCCEeeccCCCceEEcC-CCcEEEEecCccc
Q 023430          230 HL----H----KCGIVHRDLKPENILMDS-DGHVMAAHSLNSH  263 (282)
Q Consensus       230 yl----H----~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~  263 (282)
                      .|    .    ...++|+|+++.|||+++ ++.+.++||..+.
T Consensus       188 ~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        188 LLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             HHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            22    1    125899999999999986 4789999998775

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.85  E-value=0.0076  Score=51.95  Aligned_cols=76  Identities=17%  Similarity=0.291  Sum_probs=45.8

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC---CCCeeeeeEEEEeCC
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT---HPFIVQLRYSFQTRS  188 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~  188 (282)
                      .+-.+.|+-|....+|+..       ..++.+.||+-....      ...+..|.+-|+.|.   --.+.+.+++....+
T Consensus        19 i~~~~~v~GG~i~~a~~~~-------~~~~~~FvK~~~~~~------~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~   85 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD-------TDGGSYFVKVNSESG------RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD   85 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE-------TTS-EEEEEEEEGGG------CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS
T ss_pred             eeeeEecCCCChhheEEEE-------CCCccEEEEecChhh------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC
Confidence            4445778989999999876       345679999875221      234677888888874   345667888877777


Q ss_pred             EEEEEEeccCCC
Q 023430          189 KLYLILDFINGG  200 (282)
Q Consensus       189 ~~~lv~e~~~~g  200 (282)
                      .-||||||++.+
T Consensus        86 ~~fLlle~l~~~   97 (288)
T PF03881_consen   86 DAFLLLEFLEMG   97 (288)
T ss_dssp             CCEEEEE-----
T ss_pred             CceEEEEeecCC
Confidence            779999998876

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.71  E-value=0.0009  Score=62.72  Aligned_cols=60  Identities=20%  Similarity=0.309  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccccccc------chh----------heeeccCccccC
Q 023430          223 EIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC------CFF----------FFLFLGGGVFNF  282 (282)
Q Consensus       223 qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~------~~~----------~~~~~ape~~~~  282 (282)
                      +++.||.|+|. .++||+.|.|++|.++..|.+||+.|+.+-....      +.+          ..-|.|||++.+
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            45599999995 4799999999999999999999999987743222      222          456888988754

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=96.68  E-value=0.017  Score=49.80  Aligned_cols=80  Identities=11%  Similarity=0.137  Sum_probs=45.3

Q ss_pred             CcCCCeEEEEEEEcC--C-CCCCCCcEEEEEEeechhhhh--hhHHHHHHHHHHHHHhcC---------C----CCeeee
Q 023430          119 GQGAFGKVFQVKKKG--V-DDGDSDGIYAMKVMRKDTIIK--KNHVDYMKAERDILTKVT---------H----PFIVQL  180 (282)
Q Consensus       119 G~G~fg~V~~~~~~~--~-~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~---------h----~nIv~l  180 (282)
                      |.|-.|.+|++....  . ........++||.........  -.....+.+|+.+.+.+-         .    ..+.++
T Consensus         2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~   81 (294)
T PF02958_consen    2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC   81 (294)
T ss_pred             CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence            778889999887654  1 122334558899876322111  112345777876655431         1    233455


Q ss_pred             eEEEEeCCEEEEEEeccC
Q 023430          181 RYSFQTRSKLYLILDFIN  198 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~~~  198 (282)
                      +..-......+||||-+.
T Consensus        82 ~~~~~~~~~~~lvlEDL~   99 (294)
T PF02958_consen   82 YYADEDPGDEVLVLEDLS   99 (294)
T ss_pred             EEeccCCCceeeehhhhh
Confidence            555544456789998753

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.65  E-value=0.0071  Score=60.21  Aligned_cols=122  Identities=15%  Similarity=0.050  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHhcCCCCeeeeeEEEEeCCE----EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 023430          160 DYMKAERDILTKVTHPFIVQLRYSFQTRSK----LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG  235 (282)
Q Consensus       160 ~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~  235 (282)
                      ....-|...+.++.|+|++.++.+-.....    ..+..|+|..-++...+..-+..+...++.+..++++||.|+|+..
T Consensus       227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~  306 (1351)
T KOG1035|consen  227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLS  306 (1351)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence            334456777888999999999877654332    2345577888888888888788899999999999999999999997


Q ss_pred             CEeeccCCC---ceEEcCCCcEEEE--ecCcccccccchh------heeeccCcccc
Q 023430          236 IVHRDLKPE---NILMDSDGHVMAA--HSLNSHNQLCCFF------FFLFLGGGVFN  281 (282)
Q Consensus       236 iiHrDlKp~---NILl~~~~~v~l~--Dfg~s~~~~~~~~------~~~~~ape~~~  281 (282)
                      ..|.-+...   +-..+.++.+.+.  ||+.++..-...+      ...|.++|.++
T Consensus       307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~  363 (1351)
T KOG1035|consen  307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLK  363 (1351)
T ss_pred             cceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccc
Confidence            666666555   4445566677766  8877764332211      45555555543

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.61  E-value=0.061  Score=46.84  Aligned_cols=29  Identities=17%  Similarity=0.113  Sum_probs=26.7

Q ss_pred             CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          235 GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       235 ~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +++|+|+.++|+|++.++.+.++||-.+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            69999999999999999999999997775

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.60  E-value=0.025  Score=50.81  Aligned_cols=78  Identities=15%  Similarity=0.229  Sum_probs=49.6

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh---hhHHHHHHHHHHHHHhcC--CC-CeeeeeEEEEeCC
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK---KNHVDYMKAERDILTKVT--HP-FIVQLRYSFQTRS  188 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~--h~-nIv~l~~~~~~~~  188 (282)
                      .+.||.|.-..||++....     .++.++||.-.......   +-..++...|.+.|+.+.  .| .+.++|.+  +..
T Consensus        34 ~~eigdGnlN~VfrV~~~~-----~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e  106 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQ-----KNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSV  106 (409)
T ss_pred             eeEcCCCceEEEEEEeeCC-----CCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcH
Confidence            5678999999999998531     13458888654322111   223455667888888764  34 45555433  445


Q ss_pred             EEEEEEeccCC
Q 023430          189 KLYLILDFING  199 (282)
Q Consensus       189 ~~~lv~e~~~~  199 (282)
                      ...+|||+++.
T Consensus       107 ~~~~vMEdL~~  117 (409)
T PRK12396        107 MNCCVMEDLSD  117 (409)
T ss_pred             HhhHHHHhCcc
Confidence            66789999865

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.59  E-value=0.033  Score=49.10  Aligned_cols=82  Identities=20%  Similarity=0.280  Sum_probs=46.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-eeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-VQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~  188 (282)
                      +..++.. |..|-...+|++...+..  .....|++|+......   ...+ ..+|..+++.+..-++ .++++++. .+
T Consensus        15 ~~i~i~~-l~gGlTN~~~~v~~~~~~--~~~~~~v~Ri~g~~t~---~~Id-R~~E~~il~~l~~~gl~P~~l~~~~-~G   86 (330)
T PLN02421         15 SDFSVER-ISGGITNLLLKVSVKEEN--GNEVSVTVRLFGPNTD---YVID-RERELQAIKYLSAAGFGAKLLGVFG-NG   86 (330)
T ss_pred             CceEEEE-eCCcccceEEEEEecCCC--CCCceEEEEEecCCcC---eEec-hHHHHHHHHHHHhcCCCCceeEEeC-Cc
Confidence            3455544 444777888988644211  1233688887754321   1111 2458888888765444 34555553 22


Q ss_pred             EEEEEEeccCCCch
Q 023430          189 KLYLILDFINGGHL  202 (282)
Q Consensus       189 ~~~lv~e~~~~g~L  202 (282)
                         +|.+|++|..|
T Consensus        87 ---~i~~fi~g~~l   97 (330)
T PLN02421         87 ---MIQSFINARTL   97 (330)
T ss_pred             ---EeehhhcCCCC
Confidence               48899877654

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.41  E-value=0.01  Score=52.33  Aligned_cols=70  Identities=26%  Similarity=0.266  Sum_probs=50.1

Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ..|++|++- |+.|. .+   ..-...++..++.+.+.-++-+..+ ..-|||+.-.||||+ +|+|-|+||-+|+-
T Consensus       300 y~yl~~kdh-gt~is-~i---k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         300 YLYLHFKDH-GTPIS-II---KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             EEEEEEecC-Cceee-ee---ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            567777765 33442 11   1235677777777766655555433 588999999999999 99999999999973

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.12  E-value=0.032  Score=45.97  Aligned_cols=100  Identities=15%  Similarity=0.159  Sum_probs=62.9

Q ss_pred             EEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHH
Q 023430          142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT  221 (282)
Q Consensus       142 ~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~  221 (282)
                      ...+|+++.-...  .....+..+..++.++.  .|+++..-  ..-.+-++.|.|-....         +..    .++
T Consensus        87 ~L~lKKi~slp~~--~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i---------~~~----N~i  147 (308)
T PF07387_consen   87 PLFLKKIRSLPCC--INDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI---------NFS----NFI  147 (308)
T ss_pred             hhhhhhccCCCcc--cchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc---------chh----HHH
Confidence            3455655443221  12233567788887765  57777632  33356788998854211         111    111


Q ss_pred             HHHHHHHHHHHH--CCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          222 AEIVSAVSHLHK--CGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       222 ~qi~~gL~ylH~--~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      ..=+..|.-.|+  .+.+|+|..|+||+-|..|.+||.|-+
T Consensus       148 ~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  148 TAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             HHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChh
Confidence            112456777883  469999999999999999999999965

The function of this family is unknown.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.05  E-value=0.076  Score=44.00  Aligned_cols=74  Identities=18%  Similarity=0.340  Sum_probs=47.8

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC---CCeeeeeEEEEeCCEEEE
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH---PFIVQLRYSFQTRSKLYL  192 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~~~~~l  192 (282)
                      +.+.-|---..|...+       ....+.+|+-.      +..+..|..|+.-|..|.-   -.|.+++.+-...+..|+
T Consensus        22 ~~v~gG~inea~~v~d-------g~~~~FvK~n~------~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~syl   88 (286)
T COG3001          22 EEVSGGDINEAWRLRD-------GTDPFFVKCNQ------REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYL   88 (286)
T ss_pred             cccCCccccceeEeec-------CCcceEEEecc------hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEE
Confidence            3444455555555442       23457788642      3445567788877766653   456677777788889999


Q ss_pred             EEeccCCCch
Q 023430          193 ILDFINGGHL  202 (282)
Q Consensus       193 v~e~~~~g~L  202 (282)
                      ||||++-+.+
T Consensus        89 Vle~L~~~~~   98 (286)
T COG3001          89 VLEYLPTGPL   98 (286)
T ss_pred             EEeeccCCCC
Confidence            9999987544

>PRK11768 serine/threonine protein kinase; Provisional

Probab=95.84  E-value=0.36  Score=42.40  Aligned_cols=28  Identities=25%  Similarity=0.190  Sum_probs=23.9

Q ss_pred             CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          234 CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .++||+|+.+.|||++ + .+.++||+.+.
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            3689999999999995 4 57899999885

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.78  E-value=0.046  Score=49.01  Aligned_cols=60  Identities=23%  Similarity=0.215  Sum_probs=40.2

Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHHHCCCEeeccCCCceEEcC
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS-HLHKCGIVHRDLKPENILMDS  250 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~-ylH~~~iiHrDlKp~NILl~~  250 (282)
                      ..|+-+|..|.++..++... ..++.....++.-.+.|+. -+--.+++|.|+.|.||++.-
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~-~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWK-SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF  380 (565)
T ss_pred             ceeeeeccccccHHhhhhcc-cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence            45677788888887777543 3355455555544444443 334568999999999999853

>PTZ00384 choline kinase; Provisional

Probab=95.69  E-value=0.13  Score=46.35  Aligned_cols=83  Identities=14%  Similarity=0.153  Sum_probs=45.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCC-CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-eeeeEEEEeCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDD-GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-VQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~  188 (282)
                      ..++ +.|..|-...+|++....... ....+.|.+++....   .....+ -.+|+.+++.+...++ .++++.+.   
T Consensus        52 ~i~i-~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~---~~l~Id-R~~E~~i~~~Ls~~glgP~l~~~f~---  123 (383)
T PTZ00384         52 FIEI-KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTY---NSLVID-NDLQYNIAKLLGDNNFGPKIIGRFG---  123 (383)
T ss_pred             cEEE-EEeCCcccceEEEEEecCCCCCccccceEEEEeccCC---CceEec-cHHHHHHHHHHHhCCCCCeEEEecC---
Confidence            3444 455558889999987532110 001122344432111   111111 2458889988875544 45666664   


Q ss_pred             EEEEEEeccCCCch
Q 023430          189 KLYLILDFINGGHL  202 (282)
Q Consensus       189 ~~~lv~e~~~~g~L  202 (282)
                       -+++.||++|..|
T Consensus       124 -~g~l~efIeGr~l  136 (383)
T PTZ00384        124 -DFTIQEWVEGNTM  136 (383)
T ss_pred             -CEEEEEEeccccC
Confidence             2699999998765

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.30  E-value=0.04  Score=44.24  Aligned_cols=28  Identities=14%  Similarity=0.226  Sum_probs=24.7

Q ss_pred             CEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          236 IVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       236 iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+|+|+.|.||++.++| ++++||+-+..
T Consensus        79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            69999999999998777 89999987753

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.29  E-value=0.069  Score=46.96  Aligned_cols=28  Identities=32%  Similarity=0.493  Sum_probs=25.7

Q ss_pred             CEeeccCCCceEEcCCCc-EEEEecCccc
Q 023430          236 IVHRDLKPENILMDSDGH-VMAAHSLNSH  263 (282)
Q Consensus       236 iiHrDlKp~NILl~~~~~-v~l~Dfg~s~  263 (282)
                      +||.|+.+.|||++.+.. +.+.||+-|.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            999999999999999886 8899999875

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=93.86  E-value=0.13  Score=41.63  Aligned_cols=30  Identities=30%  Similarity=0.277  Sum_probs=25.4

Q ss_pred             CCCEeeccCCCceEEcCCC-----cEEEEecCccc
Q 023430          234 CGIVHRDLKPENILMDSDG-----HVMAAHSLNSH  263 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~-----~v~l~Dfg~s~  263 (282)
                      ..++|+|+.+.||++..++     .+.+.||..++
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            3589999999999998554     68999998885

subfamily of choline kinases

>PTZ00296 choline kinase; Provisional

Probab=93.76  E-value=1.5  Score=40.33  Aligned_cols=84  Identities=18%  Similarity=0.190  Sum_probs=47.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCC---CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCee-eeeEEEE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDD---GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIV-QLRYSFQ  185 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~  185 (282)
                      ++. -++.|..|-.-.+|++.......   ...++.|.+++.....   ....+ ...|..+++.+...+|- ++++.+.
T Consensus       106 ~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t---e~lId-R~~E~~v~~~ls~~gi~P~l~~~f~  180 (442)
T PTZ00296        106 DDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV---DELYN-PISEFEVYKTMSKYRIAPQLLNTFS  180 (442)
T ss_pred             ccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc---cceeC-HHHHHHHHHHHHHCCCCCceEEEeC
Confidence            345 45667778888899887542110   0124568888765432   11111 23477777776644443 3555543


Q ss_pred             eCCEEEEEEeccCCCch
Q 023430          186 TRSKLYLILDFINGGHL  202 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L  202 (282)
                          -+.|.||++|..|
T Consensus       181 ----gg~I~efi~g~~l  193 (442)
T PTZ00296        181 ----GGRIEEWLYGDPL  193 (442)
T ss_pred             ----CCEEEEeeCCccC
Confidence                2557899987643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	282
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-35
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-35
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-35
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-35
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		8e-35
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		9e-35
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		8e-34
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		3e-31
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-31
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		6e-31
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		7e-31
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		7e-31
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		8e-31
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		8e-31
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		8e-31
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-30
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-30
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-30
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-30
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		5e-30
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		5e-30
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		7e-30
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		7e-30
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		7e-30
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		3e-29
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-29
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-29
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		6e-29
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		6e-29
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		6e-29
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		6e-29
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		7e-29
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		7e-29
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		7e-29
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		7e-29
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-29
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-29
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		7e-29
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		7e-29
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		8e-29
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		9e-29
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-28
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-28
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-28
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-28
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-28
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-25
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		3e-25
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		4e-25
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		5e-25
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		7e-25
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		7e-25
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		7e-25
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		8e-25
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		8e-25
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		8e-25
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		8e-25
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-25
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		8e-25
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		8e-25
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		8e-25
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		8e-25
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		8e-25
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		8e-25
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		9e-25
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		9e-25
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		9e-25
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		9e-25
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-24
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-24
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-24
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-24
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-24
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-24
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-24
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-24
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-24
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-24
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-24
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-24
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-24
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-24
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-24
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-24
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-24
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-24
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-24
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-24
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-24
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-24
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-24
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		4e-24
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		6e-24
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		6e-24
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		6e-24
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-24
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		7e-24
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		7e-24
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-24
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		9e-24
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-23
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-23
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		1e-23
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		1e-23
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-23
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-23
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-23
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-23
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-23
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-23
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-23
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-23
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-23
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		4e-23
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		4e-22
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-22
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-21
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-20
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-20
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-20
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-20
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-19
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-19
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		5e-17
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-15
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		2e-15
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-15
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-15
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-15
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-15
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-15
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-15
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-15
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		3e-15
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-15
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		3e-15
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		4e-15
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-15
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-15
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-15
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		5e-15
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		5e-15
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		6e-15
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-15
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		7e-15
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		7e-15
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		8e-15
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		9e-15
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		9e-15
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-14
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		1e-14
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-14
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-14
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-14
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-14
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-14
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-14
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-14
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-14
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-14
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-14
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-14
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-14
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-14
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-14
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-14
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-14
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-14
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-14
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-14
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-14
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-14
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-14
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-14
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-14
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		3e-14
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		3e-14
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-14
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-14
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-14
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		6e-14
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		8e-14
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		1e-13
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-13
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-13
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-13
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-13
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-13
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		5e-13
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		5e-13
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-13
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		5e-13
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		6e-13
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		6e-13
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		7e-13
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		7e-13
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		7e-13
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		7e-13
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		8e-13
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		8e-13
3kk8_A	284	Camkii Substrate Complex A Length = 284		8e-13
3kk9_A	282	Camkii Substrate Complex B Length = 282		8e-13
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		8e-13
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		9e-13
3soa_A	444	Full-Length Human Camkii Length = 444		9e-13
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		9e-13
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-12
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-12
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-12
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-12
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-12
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-12
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-12
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		1e-12
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-12
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-12
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-12
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-12
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-12
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-12
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		3e-12
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		4e-12
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		4e-12
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		5e-12
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		6e-12
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		8e-12
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		8e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		2e-11
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-11
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		3e-11
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		3e-11
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		4e-11
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		4e-11
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		8e-11
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		8e-11
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-10
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-10
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-10
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-10
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-10
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-10
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-10
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-10
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-10
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-10
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-10
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-10
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-10
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-10
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		5e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-10
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-10
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		6e-10
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-10
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		7e-10
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		8e-10
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-09
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-09
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-09
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		4e-09
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-09
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		4e-09
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		7e-09
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		9e-09
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-08
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-08
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-08
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		2e-08
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-08
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		5e-08
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		7e-08
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		7e-08
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-07
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-07
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-07
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-07
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-07
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-07
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-07
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-07
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-07
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-07
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		1e-07
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		1e-07
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-07
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		1e-07
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-07
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-07
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-07
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-07
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-07
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-07
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-07
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-07
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-07
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-07
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-07
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-07
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-07
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-07
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-07
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-07
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-07
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-07
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-07
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-07
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-07
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-07
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-07
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-07
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-07
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-07
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-07
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-07
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-07
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-07
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-07
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-07
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-07
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-07
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		4e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		5e-07
3a7f_A	303	Human Mst3 Kinase Length = 303		5e-07
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		5e-07
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		5e-07
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		5e-07
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		6e-07
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		6e-07
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		6e-07
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-07
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		6e-07
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		6e-07
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		6e-07
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		8e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		8e-07
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		8e-07
4fie_A	423	Full-Length Human Pak4 Length = 423		8e-07
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		8e-07
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		9e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		9e-07
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		9e-07
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		9e-07
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		9e-07
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		9e-07
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		9e-07
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-06
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-06
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-06
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-06
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-06
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		1e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		1e-06
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		1e-06
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-06
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-06
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-06
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		1e-06
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-06
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-06
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-06
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-06
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-06
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-06
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-06
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-06
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-06
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		4e-06
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		5e-06
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		5e-06
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		5e-06
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		5e-06
2oza_A	356	Structure Of P38alpha Complex Length = 356		5e-06
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		5e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		5e-06
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		5e-06
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		5e-06
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		5e-06
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		6e-06
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		6e-06
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		6e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		6e-06
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		7e-06
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		7e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		7e-06
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		7e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		8e-06
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-06
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		8e-06
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-06
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		8e-06
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		8e-06
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		8e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-06
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		9e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		9e-06
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		9e-06
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-05
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-05
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		1e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		1e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-05
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		1e-05
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-05
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-05
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-05
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-05
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-05
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-05
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-05
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-05
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-05
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-05
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-05
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-05
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-05
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-05
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-05
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-05
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-05
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-05
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-05
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-05
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-05
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-05
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-05
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-05
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		3e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-05
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		4e-05
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		4e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		4e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		4e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		4e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		4e-05
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		5e-05
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		5e-05
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		5e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-05
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		5e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-05
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		5e-05
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-05
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		5e-05
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		6e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		6e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-05
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		6e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-05
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		7e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		8e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		8e-05
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		9e-05
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		9e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		1e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		1e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		1e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-04
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		2e-04
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		2e-04
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		2e-04
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		2e-04
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		2e-04
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		2e-04
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		2e-04
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		2e-04
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		2e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		2e-04
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		2e-04
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		2e-04
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		2e-04
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		2e-04
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-04
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-04
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		2e-04
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-04
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-04
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		3e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		3e-04
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-04
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		3e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		3e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-04
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		3e-04
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-04
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		3e-04
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		3e-04
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		3e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-04
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		3e-04
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-04
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-04
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		3e-04
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		3e-04
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		3e-04
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		3e-04
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		3e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		4e-04
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		4e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-04
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		4e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-04
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		5e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		5e-04
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		5e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		5e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		5e-04
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		6e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-04
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		6e-04
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		6e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		6e-04
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		6e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		6e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		6e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		6e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		7e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		7e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		7e-04
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		7e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		7e-04
3gni_B	389	Structure Of Strad And Mo25 Length = 389		7e-04
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		7e-04
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		8e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		8e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		9e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		9e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		9e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		9e-04

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Query: 109 PGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           P DF   +V+G+G+F                   YA+KV++K  I+KK    ++ +ER++
Sbjct: 37  PSDFHFLKVIGKGSFGKVLLARHKAEEV-----FYAVKVLQKKAILKKKEEKHIMSERNV 91
Query: 169 LTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
           L K V HPF+V L +SFQT  KLY +LD+INGG LF+HL R+  F E +ARFY AEI SA
Sbjct: 92  LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASA 151
Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHVM 255
           + +LH   IV+RDLKPENIL+DS GH++
Sbjct: 152 LGYLHSLNIVYRDLKPENILLDSQGHIV 179

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Query: 102 ESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDY 161
           E   K  P  FE+ +V+GQG+F                  +YAMKV++K T+  ++ V  
Sbjct: 16  EGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQ--LYAMKVLKKATLKVRDRVR- 72
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
            K ERDIL +V HPFIV+L Y+FQT  KLYLILDF+ GG LF  L ++ +F E+  +FY 
Sbjct: 73  TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           AE+  A+ HLH  GI++RDLKPENIL+D +GH+
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHI 165

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Query: 102 ESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDY 161
           E   K  P  FE+ +V+GQG+F                  +YAMKV++K T+  ++ V  
Sbjct: 17  EGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQ--LYAMKVLKKATLKVRDRVR- 73
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
            K ERDIL +V HPFIV+L Y+FQT  KLYLILDF+ GG LF  L ++ +F E+  +FY 
Sbjct: 74  TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 133
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           AE+  A+ HLH  GI++RDLKPENIL+D +GH+
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHI 166

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Query: 102 ESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDY 161
           E   K  P  FE+ +V+GQG+F                  +YAMKV++K T+  ++ V  
Sbjct: 16  EGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQ--LYAMKVLKKATLKVRDRVR- 72
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
            K ERDIL +V HPFIV+L Y+FQT  KLYLILDF+ GG LF  L ++ +F E+  +FY 
Sbjct: 73  TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           AE+  A+ HLH  GI++RDLKPENIL+D +GH+
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHI 165

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score =  143 bits (361), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 73/150 (48%), Positives = 98/150 (65%), Gaps = 3/150 (2%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKK-NHVDYMKA 164
           KI P  FE+ RV+G+G +                  I+AMKV++K  I++      + KA
Sbjct: 13  KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGK--IFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           ER+IL +V HPFIV L Y+FQT  KLYLIL++++GG LF  L R+GIF ED A FY AEI
Sbjct: 71  ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             A+ HLH+ GI++RDLKPENI+++  GHV
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHV 160

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score =  143 bits (361), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 73/150 (48%), Positives = 98/150 (65%), Gaps = 3/150 (2%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKK-NHVDYMKA 164
           KI P  FE+ RV+G+G +                  I+AMKV++K  I++      + KA
Sbjct: 13  KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGK--IFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           ER+IL +V HPFIV L Y+FQT  KLYLIL++++GG LF  L R+GIF ED A FY AEI
Sbjct: 71  ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             A+ HLH+ GI++RDLKPENI+++  GHV
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHV 160

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score =  140 bits (353), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
Query: 99  LEAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNH 158
           ++A SE K  P  FE+ +V+GQG+F                  +YAMKV++K T+  ++ 
Sbjct: 18  VKAGSE-KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGH--LYAMKVLKKATLKVRDR 74
Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
           V   K ERDIL  V HPF+V+L Y+FQT  KLYLILDF+ GG LF  L ++ +F E+  +
Sbjct: 75  VR-TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 133
Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           FY AE+   + HLH  GI++RDLKPENIL+D +GH+
Sbjct: 134 FYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHI 169

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 109/172 (63%), Gaps = 6/172 (3%)
Query: 87  QIQELEHE-NDAELEAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAM 145
           Q+  ++HE   A L   +E K+G  +FE+ +V+G GA+                  +YAM
Sbjct: 31  QLLTVKHELRTANLTGHAE-KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGK--LYAM 87
Query: 146 KVMRKDTIIKK-NHVDYMKAERDILTKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           KV++K TI++K    ++ + ER +L  +   PF+V L Y+FQT +KL+LILD+INGG LF
Sbjct: 88  KVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELF 147
Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            HL ++  F E + + Y  EIV A+ HLHK GI++RD+K ENIL+DS+GHV+
Sbjct: 148 THLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV 199

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score =  130 bits (328), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G F                   YAMK++RK+ II K+ V +   E
Sbjct: 4   KVTMNDFDYLKLLGKGTFGKVILVREKATGRY-----YAMKILRKEVIIAKDEVAHTVTE 58
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 59  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 118
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH   +V+RD+K EN+++D DGH+
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHI 147

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score =  130 bits (328), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G F                   YAMK++RK+ II K+ V +   E
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRY-----YAMKILRKEVIIAKDEVAHTVTE 55
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 56  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH   +V+RD+K EN+++D DGH+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHI 144

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score =  130 bits (327), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G F                   YAMK++RK+ II K+ V +   E
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRY-----YAMKILRKEVIIAKDEVAHTVTE 55
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 56  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH   +V+RD+K EN+++D DGH+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHI 144

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score =  130 bits (327), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G F                   YAMK++RK+ II K+ V +   E
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRY-----YAMKILRKEVIIAKDEVAHTVTE 55
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 56  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH   +V+RD+K EN+++D DGH+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHI 144

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score =  130 bits (327), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G F                   YAMK++RK+ II K+ V +   E
Sbjct: 6   KVTMNDFDYLKLLGKGTFGKVILVREKATGRY-----YAMKILRKEVIIAKDEVAHTVTE 60
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 61  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 120
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH   +V+RD+K EN+++D DGH+
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLDKDGHI 149

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score =  130 bits (327), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G F                   YAMK++RK+ II K+ V +   E
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRY-----YAMKILRKEVIIAKDEVAHTVTE 55
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 56  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH   +V+RD+K EN+++D DGH+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHI 144

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score =  130 bits (327), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G F                   YAMK++RK+ II K+ V +   E
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRY-----YAMKILRKEVIIAKDEVAHTVTE 55
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 56  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH   +V+RD+K EN+++D DGH+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHI 144

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 6/155 (3%)
Query: 101 AESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVD 160
           A+ + ++   +FE  +++G+G F                   YAMK+++K+ I+ K+ V 
Sbjct: 139 AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGR-----YYAMKILKKEVIVAKDEVA 193
Query: 161 YMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
           +   E  +L    HPF+  L+YSFQT  +L  ++++ NGG LFFHL R+ +F ED+ARFY
Sbjct: 194 HTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253
Query: 221 TAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
            AEIVSA+ +LH +  +V+RDLK EN+++D DGH+
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 288

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 6/155 (3%)
Query: 101 AESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVD 160
           A+ + ++   +FE  +++G+G F                   YAMK+++K+ I+ K+ V 
Sbjct: 142 AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGR-----YYAMKILKKEVIVAKDEVA 196
Query: 161 YMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
           +   E  +L    HPF+  L+YSFQT  +L  ++++ NGG LFFHL R+ +F ED+ARFY
Sbjct: 197 HTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 221 TAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
            AEIVSA+ +LH +  +V+RDLK EN+++D DGH+
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 291

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 5/150 (3%)
Query: 105 RKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           RK  P DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  
Sbjct: 5   RKKRPEDFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTR 59
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           ERD+++++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEI
Sbjct: 60  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 119
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           VSA+ +LH  GI+HRDLKPENIL++ D H+
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDMHI 149

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 5/150 (3%)
Query: 105 RKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           RK  P DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  
Sbjct: 4   RKKRPEDFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTR 58
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           ERD+++++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEI
Sbjct: 59  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 118
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           VSA+ +LH  GI+HRDLKPENIL++ D H+
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMHI 148

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 5/150 (3%)
Query: 105 RKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           RK  P DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  
Sbjct: 3   RKKRPEDFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTR 57
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           ERD+++++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEI
Sbjct: 58  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           VSA+ +LH  GI+HRDLKPENIL++ D H+
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHI 147

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 5/150 (3%)
Query: 105 RKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           RK  P DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  
Sbjct: 2   RKKRPEDFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTR 56
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           ERD+++++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEI
Sbjct: 57  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 116
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           VSA+ +LH  GI+HRDLKPENIL++ D H+
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDMHI 146

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score =  127 bits (319), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 6/150 (4%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           ++   +FE  +++G+G F                   YAMK+++K+ I+ K+ V +   E
Sbjct: 4   RVTMNEFEYLKLLGKGTFGKVILVKEKATGR-----YYAMKILKKEVIVAKDEVAHTLTE 58
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+YSFQT  +L  ++++ NGG LFFHL R+ +F ED+ARFY AEIV
Sbjct: 59  NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 226 SAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH +  +V+RDLK EN+++D DGH+
Sbjct: 119 SALDYLHSEKNVVYRDLKLENLMLDKDGHI 148

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score =  127 bits (319), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 6/150 (4%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           ++   +FE  +++G+G F                   YAMK+++K+ I+ K+ V +   E
Sbjct: 5   RVTMNEFEYLKLLGKGTFGKVILVKEKATGR-----YYAMKILKKEVIVAKDEVAHTLTE 59
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+YSFQT  +L  ++++ NGG LFFHL R+ +F ED+ARFY AEIV
Sbjct: 60  NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 119
Query: 226 SAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH +  +V+RDLK EN+++D DGH+
Sbjct: 120 SALDYLHSEKNVVYRDLKLENLMLDKDGHI 149

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score =  127 bits (319), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 6/150 (4%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           ++   +FE  +++G+G F                   YAMK+++K+ I+ K+ V +   E
Sbjct: 6   RVTMNEFEYLKLLGKGTFGKVILVKEKATGR-----YYAMKILKKEVIVAKDEVAHTLTE 60
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+YSFQT  +L  ++++ NGG LFFHL R+ +F ED+ARFY AEIV
Sbjct: 61  NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 226 SAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH +  +V+RDLK EN+++D DGH+
Sbjct: 121 SALDYLHSEKNVVYRDLKLENLMLDKDGHI 150

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 106/168 (63%), Gaps = 9/168 (5%)
Query: 91  LEHENDAELEAESER---KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKV 147
           +E E +A    ES +    +G  DF++ RV+G+G++                  IYAM+V
Sbjct: 30  IEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSY-----AKVLLVRLKKTDRIYAMRV 84
Query: 148 MRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL 206
           ++K+ +     +D+++ E+ +  + + HPF+V L   FQT S+L+ +++++NGG L FH+
Sbjct: 85  VKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM 144
Query: 207 YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            RQ    E+ ARFY+AEI  A+++LH+ GI++RDLK +N+L+DS+GH+
Sbjct: 145 QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 192

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 98/149 (65%), Gaps = 6/149 (4%)
Query: 107 IGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAER 166
           +G  DF++ RV+G+G++                  IYAMKV++K+ +     +D+++ E+
Sbjct: 17  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDR-----IYAMKVVKKELVNDDEDIDWVQTEK 71
Query: 167 DILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
            +  + + HPF+V L   FQT S+L+ +++++NGG L FH+ RQ    E+ ARFY+AEI 
Sbjct: 72  HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 131
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            A+++LH+ GI++RDLK +N+L+DS+GH+
Sbjct: 132 LALNYLHERGIIYRDLKLDNVLLDSEGHI 160

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 98/149 (65%), Gaps = 6/149 (4%)
Query: 107 IGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAER 166
           +G  DF++ RV+G+G++                  IYAMKV++K+ +     +D+++ E+
Sbjct: 2   LGLQDFDLLRVIGRGSYAKVLLVRLKKTDR-----IYAMKVVKKELVNDDEDIDWVQTEK 56
Query: 167 DILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
            +  + + HPF+V L   FQT S+L+ +++++NGG L FH+ RQ    E+ ARFY+AEI 
Sbjct: 57  HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 116
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            A+++LH+ GI++RDLK +N+L+DS+GH+
Sbjct: 117 LALNYLHERGIIYRDLKLDNVLLDSEGHI 145

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 36  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 90
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 91  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 150
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHI 174

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 31  DFKFGKILGEGSFSTTVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 86  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHI 169

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 34  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 88
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 89  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHI 172

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 98/149 (65%), Gaps = 6/149 (4%)
Query: 107 IGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAER 166
           +G  DF++ RV+G+G++                  IYAMKV++K+ +     +D+++ E+
Sbjct: 6   LGLQDFDLLRVIGRGSYAKVLLVRLKKTDR-----IYAMKVVKKELVNDDEDIDWVQTEK 60
Query: 167 DILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
            +  + + HPF+V L   FQT S+L+ +++++NGG L FH+ RQ    E+ ARFY+AEI 
Sbjct: 61  HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 120
Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            A+++LH+ GI++RDLK +N+L+DS+GH+
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHI 149

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 88  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHI 171

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 88  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHI 171

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 34  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 88
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 89  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHI 172

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 31  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 86  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHI 169

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 31  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 86  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHI 169

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 31  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 86  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHI 169

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 88  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHI 171

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 88  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHI 171

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score =  124 bits (310), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 88  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHI 171

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score =  123 bits (309), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 30  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 84
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 85  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHI 168

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 15  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 69
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 70  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 129
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHI 153

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 30  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 84
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 85  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHI 168

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 38  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 92
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L + FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 93  RLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 152
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHI 176

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+  +++G+G+F                   YA+K++ K  IIK+N V Y+  ERD+++
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEIVSA+ +
Sbjct: 88  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH  GI+HRDLKPENIL++ D H+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHI 171

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
           S  ++G  +FE  RV+G+G+F                  +YA+KV++KD I++ + V+  
Sbjct: 16  SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGD-----LYAVKVLKKDVILQDDDVECT 70
Query: 163 KAERDILTKV-THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
             E+ IL+    HPF+ QL   FQT  +L+ +++F+NGG L FH+ +   F E +ARFY 
Sbjct: 71  MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           AEI+SA+  LH  GI++RDLK +N+L+D +GH   A
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLA 166

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+I R +G G+F                   YAMKV++K+ +++   V++   ER +L+
Sbjct: 7   DFQILRTLGTGSFGRVHLIRSRHNGRY-----YAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            VTHPFI+++  +FQ   ++++I+D+I GG LF  L +   F    A+FY AE+  A+ +
Sbjct: 62  IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH   I++RDLKPENIL+D +GH+
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHI 145

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF    V+G+G+F                  +YA+K+++KD +I+ + V+    E+ +L 
Sbjct: 20  DFNFLMVLGKGSFGKVMLADRKGTEE-----LYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 171 KVTHP-FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
            +  P F+ QL   FQT  +LY +++++NGG L +H+ + G F+E QA FY AEI   + 
Sbjct: 75  LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            LHK GI++RDLK +N+++DS+GH+  A
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIA 162

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI +V+G+GAF                  +YAMK+M K  ++K+  V   + ERD+L 
Sbjct: 62  DFEILKVIGRGAFSEVAVVKMKQTGQ-----VYAMKIMNKWDMLKRGEVSCFREERDVLV 116
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVS 229
                +I QL ++FQ  + LYL++++  GG L   L + G     + ARFY AEIV A+ 
Sbjct: 117 NGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAID 176
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +H+ G VHRD+KP+NIL+D  GH+  A
Sbjct: 177 SVHRLGYVHRDIKPDNILLDRCGHIRLA 204

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 76/115 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++  A
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 183

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 90  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 149
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 150 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 201

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 90  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 149
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 150 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 201

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 64  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 123
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 124 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 175

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 56  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 115
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 116 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYI 167

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 130 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 76/115 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++  A
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 183

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           +AMK++ K  ++K   +++   E+ IL  V  PF+V+L YSF+  S LY++++++ GG +
Sbjct: 69  FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 90  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 149
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 150 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 201

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           +AMK++ K  ++K   +++   E+ IL  V  PF+V+L YSF+  S LY++++++ GG +
Sbjct: 69  FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 62  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 122 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 173

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 76/115 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++  A
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVA 183

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 62  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 122 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 173

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           +AMK++ K  ++K   +++   E+ IL  V  PF+V+L YSF+  S LY++++++ GG +
Sbjct: 69  FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 55  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 114
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++
Sbjct: 115 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 166

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 75/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYI 180

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           FE  R +G G+F                   YAMK++ K  ++K   +++   E+ I   
Sbjct: 44  FERIRTLGTGSFGRVMLVKHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           V  PF+V+L +SF+  S LY++L++  GG +F HL R G F E  ARFY A+IV    +L
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 232 HKCGIVHRDLKPENILMDSDGHVMAA 257
           H   +++RDLKPEN+L+D  G++  A
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVA 184

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           FEI R +G+G+F                  +YAMK M K   +++N V  +  E  I+  
Sbjct: 17  FEILRAIGKGSFGKVCIVQKNDTKK-----MYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HPF+V L YSFQ    +++++D + GG L +HL +   F+E+  + +  E+V A+ +L
Sbjct: 72  LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
               I+HRD+KP+NIL+D  GHV
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHV 154

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 74/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY+++++  GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 180

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 74/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY+++++  GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 181

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 74/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY+++++  GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 180

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 74/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY+++++  GG +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 180

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 74/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY+++++  GG +
Sbjct: 69  YAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 180

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 74/112 (66%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY+++++  GG +
Sbjct: 69  YAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 180

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+E+ +V+G+GAF                  +YAMK++ K  +IK++   +   ERDI+ 
Sbjct: 75  DYEVVKVIGRGAFGEVQLVRHKSTRK-----VYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
               P++VQL Y+FQ    LY++++++ GG L  +L       E  ARFYTAE+V A+  
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
           +H  G +HRD+KP+N+L+D  GH+  A
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLA 215

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+E+ +V+G+GAF                  +YAMK++ K  +IK++   +   ERDI+ 
Sbjct: 70  DYEVVKVIGRGAFGEVQLVRHKSTRK-----VYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
               P++VQL Y+FQ    LY++++++ GG L  +L       E  ARFYTAE+V A+  
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDA 183
Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
           +H  G +HRD+KP+N+L+D  GH+  A
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLA 210

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+E+ +V+G+GAF                  +YAMK++ K  +IK++   +   ERDI+ 
Sbjct: 75  DYEVVKVIGRGAFGEVQLVRHKSTRK-----VYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
               P++VQL Y+FQ    LY++++++ GG L  +L       E  ARFYTAE+V A+  
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
           +H  G +HRD+KP+N+L+D  GH+  A
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLA 215

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI +V+G+GAF                  IYAMK++ K  ++K+      + ERD+L 
Sbjct: 91  DFEIIKVIGRGAFGEVAVVKMKNTER-----IYAMKILNKWEMLKRAETACFREERDVLV 145
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVS 229
                +I  L Y+FQ  + LYL++D+  GG L   L + +    ED ARFY  E+V A+ 
Sbjct: 146 NGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID 205
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +H+   VHRD+KP+N+L+D +GH+  A
Sbjct: 206 SIHQLHYVHRDIKPDNVLLDVNGHIRLA 233

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI +V+G+GAF                  IYAMK++ K  ++K+      + ERD+L 
Sbjct: 75  DFEIIKVIGRGAFGEVAVVKMKNTER-----IYAMKILNKWEMLKRAETACFREERDVLV 129
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVS 229
                +I  L Y+FQ  + LYL++D+  GG L   L + +    ED ARFY  E+V A+ 
Sbjct: 130 NGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID 189
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +H+   VHRD+KP+N+L+D +GH+  A
Sbjct: 190 SIHQLHYVHRDIKPDNVLLDVNGHIRLA 217

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI +V+G+GAF                  ++AMK++ K  ++K+      + ERD+L 
Sbjct: 75  DFEILKVIGRGAFGEVAVVKLKNADK-----VFAMKILNKWEMLKRAETACFREERDVLV 129
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVS 229
                +I  L Y+FQ  + LYL++D+  GG L   L + +    E+ ARFY AE+V A+ 
Sbjct: 130 NGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAID 189
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +H+   VHRD+KP+NILMD +GH+  A
Sbjct: 190 SVHQLHYVHRDIKPDNILMDMNGHIRLA 217

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF + R++G+G F                  +YAMK + K  I  K        ER +L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 171 KVTH---PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
            V+    PFIV + Y+F T  KL  ILD +NGG L +HL + G+F E   RFY AEI+  
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           + H+H   +V+RDLKP NIL+D  GHV
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHV 331

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF + R++G+G F                  +YAMK + K  I  K        ER +L+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLS 243
Query: 171 KVTH---PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
            V+    PFIV + Y+F T  KL  ILD +NGG L +HL + G+F E   RFY AEI+  
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           + H+H   +V+RDLKP NIL+D  GHV
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHV 330

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF + R++G+G F                  +YAMK + K  I  K        ER +L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 171 KVTH---PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
            V+    PFIV + Y+F T  KL  ILD +NGG L +HL + G+F E   RFY AEI+  
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           + H+H   +V+RDLKP NIL+D  GHV
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHV 331

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF + R++G+G F                  +YAMK + K  I  K        ER +L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 171 KVTH---PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
            V+    PFIV + Y+F T  KL  ILD +NGG L +HL + G+F E   RFY AEI+  
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           + H+H   +V+RDLKP NIL+D  GHV
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHV 331

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 73/112 (65%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+ +L +SF+  S LY+++++  GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 130 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 181

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 73/112 (65%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+ +L +SF+  S LY+++++  GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 181

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 73/112 (65%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YAMK++ K  ++K   +++   E+ IL  V  PF+ +L +SF+  S LY+++++  GG +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+++D  G++
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 181

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF    V+G+G+F                  +YA+K+++KD +I+ + V+    E+ +L 
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDE-----LYAVKILKKDVVIQDDDVECTMVEKRVLA 396
Query: 171 KVTHP-FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
               P F+ QL   FQT  +LY +++++NGG L +H+ + G F+E  A FY AEI   + 
Sbjct: 397 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 456
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            L   GI++RDLK +N+++DS+GH+  A
Sbjct: 457 FLQSKGIIYRDLKLDNVMLDSEGHIKIA 484

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF    V+G+G+F                  +YA+K+++KD +I+ + V+    E+ +L 
Sbjct: 21  DFNFLMVLGKGSFGKVMLSERKGTDE-----LYAVKILKKDVVIQDDDVECTMVEKRVLA 75
Query: 171 KVTHP-FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
               P F+ QL   FQT  +LY +++++NGG L +H+ + G F+E  A FY AEI   + 
Sbjct: 76  LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 135
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
            L   GI++RDLK +N+++DS+GH+  A
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEGHIKIA 163

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ +V+G+GAF                  +YAMK++ K  +IK++   +   ERDI+ 
Sbjct: 76  DYDVVKVIGRGAFGEVQLVRHKASQK-----VYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
               P++VQL  +FQ    LY++++++ GG L  +L       E  A+FYTAE+V A+  
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVLALDA 189
Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
           +H  G++HRD+KP+N+L+D  GH+  A
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLA 216

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DFE+ +++G+G+F                   +A+K ++KD ++  + V+    E
Sbjct: 14  KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVVLMDDDVECTMVE 68
Query: 166 RDILT-KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           + +L+    HPF+  +  +FQT+  L+ +++++NGG L +H+     F   +A FY AEI
Sbjct: 69  KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 128
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  +  LH  GIV+RDLK +NIL+D DGH+  A
Sbjct: 129 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA 161

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 106 KIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF + +++G+G+F                   +A+K ++KD ++  + V+    E
Sbjct: 13  KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVVLMDDDVECTMVE 67
Query: 166 RDILT-KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           + +L+    HPF+  +  +FQT+  L+ +++++NGG L +H+     F   +A FY AEI
Sbjct: 68  KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 127
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  +  LH  GIV+RDLK +NIL+D DGH+  A
Sbjct: 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA 160

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 107 IGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAER 166
           +G   F  FRV+G+G F                  +YA K + K  + K+        E+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTA 222
            IL KV   FIV L Y+F+T++ L L++  +NGG + +H+Y        F+E +A FYTA
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +IVS + HLH+  I++RDLKPEN+L+D DG+V
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNV 328

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 107 IGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAER 166
           +G   F  FRV+G+G F                  +YA K + K  + K+        E+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTA 222
            IL KV   FIV L Y+F+T++ L L++  +NGG + +H+Y        F+E +A FYTA
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +IVS + HLH+  I++RDLKPEN+L+D DG+V
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNV 328

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 107 IGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAER 166
           +G   F  FRV+G+G F                  +YA K + K  + K+        E+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTA 222
            IL KV   FIV L Y+F+T++ L L++  +NGG + +H+Y        F+E +A FYTA
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +IVS + HLH+  I++RDLKPEN+L+D DG+V
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNV 328

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 107 IGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAER 166
           +G   F  FRV+G+G F                  +YA K + K  + K+        E+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTA 222
            IL KV   FIV L Y+F+T++ L L++  +NGG + +H+Y        F+E +A FYTA
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +IVS + HLH+  I++RDLKPEN+L+D DG+V
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNV 328

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F  +RV+G+G F                  +YA K + K  I K+        E+ IL K
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVS 229
           V   F+V L Y+++T+  L L+L  +NGG L FH+Y  G   F E +A FY AEI   + 
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
            LH+  IV+RDLKPENIL+D  GH+
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHI 325

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F  +RV+G+G F                  +YA K + K  I K+        E+ IL K
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVS 229
           V   F+V L Y+++T+  L L+L  +NGG L FH+Y  G   F E +A FY AEI   + 
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
            LH+  IV+RDLKPENIL+D  GH+
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHI 325

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 71/105 (67%), Gaps = 5/105 (4%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YA+KV++K T+ KK     ++ E  +L +++HP I++L+  F+T +++ L+L+ + GG L
Sbjct: 81  YALKVLKK-TVDKK----IVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL 247
           F  +  +G + E  A     +I+ AV++LH+ GIVHRDLKPEN+L
Sbjct: 136 FDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 180

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +RK    DF+I R +G+G F                  I A+KV+ K  + K+     ++
Sbjct: 8   KRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKF-----IMALKVLFKSQLEKEGVEHQLR 62
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I+++   F  R ++YL+L+F   G L+  L + G F E ++  +  E
Sbjct: 63  REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  A+ + H+  ++HRD+KPEN+LM   G +  A
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIA 156

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 100 EAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHV 159
           +AE  R I    ++   V+G GAF                  + A+K + K+ +  K   
Sbjct: 12  QAEDIRDI----YDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKEALEGKEGS 62
Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
             M+ E  +L K+ HP IV L   +++   LYLI+  ++GG LF  +  +G + E  A  
Sbjct: 63  --MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENIL---MDSDGHVM 255
              +++ AV +LH  GIVHRDLKPEN+L   +D D  +M
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 159

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +RK    DF+I R +G+G F                  I A+KV+ K  + K+     ++
Sbjct: 9   KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKF-----IMALKVLFKSQLEKEGVEHQLR 63
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I+++   F  R ++YL+L+F   G L+  L + G F E ++  +  E
Sbjct: 64  REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 123
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  A+ + H+  ++HRD+KPEN+LM   G +  A
Sbjct: 124 LADALHYCHERKVIHRDIKPENLLMGYKGELKIA 157

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 100 EAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHV 159
           +AE  R I    ++   V+G GAF                  + A+K + K+ +  K   
Sbjct: 12  QAEDIRDI----YDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKEALEGKEGS 62
Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
             M+ E  +L K+ HP IV L   +++   LYLI+  ++GG LF  +  +G + E  A  
Sbjct: 63  --MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENIL---MDSDGHVM 255
              +++ AV +LH  GIVHRDLKPEN+L   +D D  +M
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 159

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 100 EAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHV 159
           +AE  R I    ++   V+G GAF                  + A+K + K+ +  K   
Sbjct: 12  QAEDIRDI----YDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKEALEGKEGS 62
Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
             M+ E  +L K+ HP IV L   +++   LYLI+  ++GG LF  +  +G + E  A  
Sbjct: 63  --MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENIL---MDSDGHVM 255
              +++ AV +LH  GIVHRDLKPEN+L   +D D  +M
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 159

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A+K++ K T +  + +  +  E  I+
Sbjct: 7   GNYRLLKTIGKGNFAKVKLARHILTGKEV-----AVKIIDK-TQLNSSSLQKLFREVRIM 60
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYL++++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 61  KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ 120
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADMNIKIA 148

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 73  GPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFXXXXXXXXX 132
           GP P      S P    E E  +  + E   +R+    DFEI R +G+G F         
Sbjct: 1   GPQP----LPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREK 56
Query: 133 XXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYL 192
                    I A+KV+ K  + K      ++ E +I + + HP I++L   F   +++YL
Sbjct: 57  QSKF-----ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 111
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           IL++   G ++  L +   F E +   Y  E+ +A+S+ H   ++HRD+KPEN+L+ S G
Sbjct: 112 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 171
Query: 253 HVMAA 257
            +  A
Sbjct: 172 ELKIA 176

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 14/159 (8%)
Query: 100 EAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHV 159
           +AE  R I    ++   V+G GAF                  + A+K + K  +  K   
Sbjct: 12  QAEDIRDI----YDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKKALEGKEGS 62
Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
             M+ E  +L K+ HP IV L   +++   LYLI+  ++GG LF  +  +G + E  A  
Sbjct: 63  --MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENIL---MDSDGHVM 255
              +++ AV +LH  GIVHRDLKPEN+L   +D D  +M
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 159

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 73  GPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFXXXXXXXXX 132
           GP P      S P    E E  +  + E   +R+    DFEI R +G+G F         
Sbjct: 1   GPQP----LPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREK 56
Query: 133 XXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYL 192
                    I A+KV+ K  + K      ++ E +I + + HP I++L   F   +++YL
Sbjct: 57  QSKF-----ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 111
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           IL++   G ++  L +   F E +   Y  E+ +A+S+ H   ++HRD+KPEN+L+ S G
Sbjct: 112 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 171
Query: 253 HVMAA 257
            +  A
Sbjct: 172 ELKIA 176

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A+K++ K T +  + +  +  E  I+
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEV-----AVKIIDK-TQLNSSSLQKLFREVRIM 67
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYL++++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 68  KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIA 155

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A+K++ K T +    +  +  E  I+
Sbjct: 15  GNYRLLKTIGKGNFAKVKLARHILTGREV-----AIKIIDK-TQLNPTSLQKLFREVRIM 68
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYLI+++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 69  KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 128
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIA 156

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A+K++ K T +  + +  +  E  I+
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEV-----AVKIIDK-TQLNSSSLQKLFREVRIM 67
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYL++++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 68  KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIA 155

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A+K++ K T +  + +  +  E  I+
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEV-----AVKIIDK-TQLNSSSLQKLFREVRIM 67
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYL++++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 68  KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIA 155

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A+K++ K T +    +  +  E  I+
Sbjct: 12  GNYRLLKTIGKGNFAKVKLARHILTGREV-----AIKIIDK-TQLNPTSLQKLFREVRIM 65
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYLI+++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 66  KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 125
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIA 153

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F    V+G GAF                  ++A+K ++K    + +    ++ E  +L K
Sbjct: 11  FIFMEVLGSGAFSEVFLVKQRLTGK-----LFALKCIKKSPAFRDSS---LENEIAVLKK 62
Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + H  IV L   +++ +  YL++  ++GG LF  +  +G++ E  A     +++SAV +L
Sbjct: 63  IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 232 HKCGIVHRDLKPENIL 247
           H+ GIVHRDLKPEN+L
Sbjct: 123 HENGIVHRDLKPENLL 138

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 100 EAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHV 159
           E   +R+    DFEI R +G+G F                  I A+KV+ K  + K    
Sbjct: 15  EESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVE 69
Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
             ++ E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   
Sbjct: 70  HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 129
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           Y  E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 130 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 167

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
           VD  K E +I+  + HP I++L  +F+  + +YL+++   GG LF  +  + +FRE  A 
Sbjct: 67  VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 126
Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
               +++SAV++ HK  + HRDLKPEN L  +D
Sbjct: 127 RIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 159

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
           VD  K E +I+  + HP I++L  +F+  + +YL+++   GG LF  +  + +FRE  A 
Sbjct: 50  VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 109
Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
               +++SAV++ HK  + HRDLKPEN L  +D
Sbjct: 110 RIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 142

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A++++ K T +  + +  +  E  I+
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEV-----AVRIIDK-TQLNSSSLQKLFREVRIM 67
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYL++++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 68  KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIA 155

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 100 EAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHV 159
           +AE  +KI    FE    +G GAF                  ++A+K + K  +  K   
Sbjct: 16  QAEDIKKI----FEFKETLGTGAFSEVVLAEEKATGK-----LFAVKCIPKKAL--KGKE 64
Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
             ++ E  +L K+ H  IV L   +++ + LYL++  ++GG LF  +  +G + E  A  
Sbjct: 65  SSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST 124
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENIL---MDSDGHVM 255
              +++ AV +LH+ GIVHRDLKPEN+L    D +  +M
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIM 163

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A++++ K T +  + +  +  E  I+
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEV-----AVRIIDK-TQLNSSSLQKLFREVRIM 67
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYL++++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 68  KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIA 155

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 7   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 61
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 7   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 61
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
           S+R+    DFEI R +G+G F                  I A+KV+ K  + K      +
Sbjct: 5   SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQL 59
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 60  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 119
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 154

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 4   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 58
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 59  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH 258
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A+
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIAN 153

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
           ++R+    DFEI R +G+G F                  I A+KV+ K  + K      +
Sbjct: 1   AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKF-----ILALKVLFKAQLEKAGVEHQL 55
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 56  RREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 116 ELANALSYCHSKKVIHRDIKPENLLLGSAGELKIA 150

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 7   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 61
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 101 AESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVD 160
           A   R+    DFEI R +G+G F                  I A+KV+ K  + K     
Sbjct: 2   AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEH 56
Query: 161 YMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
            ++ E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y
Sbjct: 57  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 3   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 57
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 5   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 59
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 7   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 61
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 4   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 58
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 59  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 152

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 105 RKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           R+    DFEI R +G+G F                  I A+KV+ K  + K      ++ 
Sbjct: 3   RQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLRR 57
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E+
Sbjct: 58  EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
           ++R+    DFEI R +G+G F                  I A+KV+ K  + K      +
Sbjct: 1   AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQL 55
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 56  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 7   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 61
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A+K++ K T +  + +  +  E  I 
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEV-----AVKIIDK-TQLNSSSLQKLFREVRIX 67
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYL+ ++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 68  KVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ 127
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D+D ++  A
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADXNIKIA 155

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 3   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 57
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 3   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 57
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 105 RKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           R+    DFEI R +G+G F                  I A+KV+ K  + K      ++ 
Sbjct: 3   RQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLRR 57
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E+
Sbjct: 58  EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 5   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 59
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH 258
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIAN 154

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 2   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 56
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 2   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 56
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
           S+R+    DF+I R +G+G F                  I A+KV+ K  + K      +
Sbjct: 5   SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKF-----ILALKVLFKTQLEKAGVEHQL 59
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 60  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT 119
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S+G +  A
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIA 154

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
           S+R+    DF+I R +G+G F                  I A+KV+ K  + K      +
Sbjct: 5   SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKF-----ILALKVLFKTQLEKAGVEHQL 59
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 60  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT 119
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S+G +  A
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIA 154

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G++ + + +G+G F                    A+K++ K T +    +  +  E  I+
Sbjct: 15  GNYRLQKTIGKGNFAKVKLARHVLTGREV-----AVKIIDK-TQLNPTSLQKLFREVRIM 68
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+L    +T   LYL++++ +GG +F +L   G  +E +AR    +IVSAV 
Sbjct: 69  KILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 128
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLK EN+L+D D ++  A
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMNIKIA 156

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
            +R+    DFEI R +G+G F                  I A+KV+ K  + K      +
Sbjct: 1   GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQL 55
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 56  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 104 ERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G F                  I A+KV+ K  + K      ++
Sbjct: 1   KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLR 55
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 56  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 116 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 149

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
            +R+    DFEI R +G+G F                  I A+KV+ K  + K      +
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQL 58
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 59  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
            +R+    DFEI R +G+G F                  I A+KV+ K  + K      +
Sbjct: 1   GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQL 55
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 56  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
           E DIL KV+ HP I+QL+ +++T +  +L+ D +  G LF +L  +    E + R     
Sbjct: 60  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++  +  LHK  IVHRDLKPENIL+D D ++
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNI 150

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
           E DIL KV+ HP I+QL+ +++T +  +L+ D +  G LF +L  +    E + R     
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++  +  LHK  IVHRDLKPENIL+D D ++
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNI 163

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
           E DIL KV+ HP I+QL+ +++T +  +L+ D +  G LF +L  +    E + R     
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++  +  LHK  IVHRDLKPENIL+D D ++
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNI 163

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 105 RKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           R+    DFEI R +G+G F                  I A+KV+ K  + K      ++ 
Sbjct: 6   RQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLRR 60
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E+
Sbjct: 61  EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 103 SERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
            +R+    DFEI R +G+G F                  I A+KV+ K  + K      +
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQL 58
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           + E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  
Sbjct: 59  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           E+ +A+S+ H   ++HRD+KPEN+L+ S G +  A
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI R +G+G F                  I A+KV+ K  + K      ++ E +I +
Sbjct: 6   DFEIGRPLGKGKFGNVYLAREKQRKF-----ILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E+ +A+S+
Sbjct: 61  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 231 LHKCGIVHRDLKPENILMDSDGHVMAA 257
            H   ++HRD+KPEN+L+ S G +  A
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIA 147

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +++F  +G+GAF                   YA K++    +  ++H   ++ E  I   
Sbjct: 24  YQLFEELGKGAFSVVRRCVKVLAGQE-----YAAKIINTKKLSARDH-QKLEREARICRL 77
Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP IV+L  S       YLI D + GG LF  +  +  + E  A     +I+ AV H 
Sbjct: 78  LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 232 HKCGIVHRDLKPENILMDS 250
           H+ G+VHRDLKPEN+L+ S
Sbjct: 138 HQMGVVHRDLKPENLLLAS 156

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           HP IV+L   F  +   +L+++ +NGG LF  + ++  F E +A +   ++VSAVSH+H 
Sbjct: 65  HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 234 CGIVHRDLKPENIL 247
            G+VHRDLKPEN+L
Sbjct: 125 VGVVHRDLKPENLL 138

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFY 220
           + E  +L  + HP IVQ R SF+    LY+++D+  GG LF  +  Q   +F+EDQ   +
Sbjct: 71  RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +I  A+ H+H   I+HRD+K +NI +  DG V
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTV 164

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 65/107 (60%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K++ +  I   + V  +K E   L    HP I++L     T +  ++++++++GG LF
Sbjct: 40  AVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELF 99
Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            ++ + G   E +AR    +I+SAV + H+  +VHRDLKPEN+L+D+
Sbjct: 100 DYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA 146

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 65/107 (60%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K++ +  I   + V  +K E   L    HP I++L     T +  ++++++++GG LF
Sbjct: 40  AVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELF 99
Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            ++ + G   E +AR    +I+SAV + H+  +VHRDLKPEN+L+D+
Sbjct: 100 DYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA 146

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 65/107 (60%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K++ +  I   + V  ++ E   L    HP I++L     T S +++++++++GG LF
Sbjct: 45  AVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELF 104
Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            ++ + G   E ++R    +I+S V + H+  +VHRDLKPEN+L+D+
Sbjct: 105 DYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA 151

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           ++++F  +G+GAF                   YA K++    +  ++H   ++ E  I  
Sbjct: 5   EYQLFEELGKGAFSVVRRCMKIPTGQE-----YAAKIINTKKLSARDH-QKLEREARICR 58
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP IV+L  S       YL+ D + GG LF  +  +  + E  A     +I+ +V+H
Sbjct: 59  LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 231 LHKCGIVHRDLKPENILMDS 250
            H  GIVHRDLKPEN+L+ S
Sbjct: 119 CHLNGIVHRDLKPENLLLAS 138

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 64/107 (59%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K+++K ++   ++   +  E  +L ++ HP I++L   F+ +   YL+++   GG LF
Sbjct: 33  AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 92
Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
             +  +  F E  A     +++S  ++LHK  IVHRDLKPEN+L++S
Sbjct: 93  DEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLES 139

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 160 DYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQA 217
           D+ K ER+  I  K+ HP IV+L  S Q  S  YL+ D + GG LF  +  +  + E  A
Sbjct: 71  DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA 130
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
                +I+ ++++ H  GIVHR+LKPEN+L+ S
Sbjct: 131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 163

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 64/107 (59%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K+++K ++   ++   +  E  +L ++ HP I++L   F+ +   YL+++   GG LF
Sbjct: 50  AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 109
Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
             +  +  F E  A     +++S  ++LHK  IVHRDLKPEN+L++S
Sbjct: 110 DEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLES 156

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++F  +G+GAF                   YA K++    +  ++H   ++ E  I  
Sbjct: 32  DYQLFEELGKGAFSVVRRCVKKTPTQE-----YAAKIINTKKLSARDH-QKLEREARICR 85
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP IV+L  S       YL+ D + GG LF  +  +  + E  A     +I+ +V+H
Sbjct: 86  LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNH 145
Query: 231 LHKCGIVHRDLKPENILMDS 250
           +H+  IVHRDLKPEN+L+ S
Sbjct: 146 IHQHDIVHRDLKPENLLLAS 165

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           ++++F  +G+GAF                   YA K++    +  ++H   ++ E  I  
Sbjct: 5   EYQLFEELGKGAFSVVRRCMKIPTGQE-----YAAKIINTKKLSARDH-QKLEREARICR 58
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP IV+L  S       YL+ D + GG LF  +  +  + E  A     +I+ +V+H
Sbjct: 59  LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 231 LHKCGIVHRDLKPENILMDS 250
            H  GIVHRDLKPEN+L+ S
Sbjct: 119 CHLNGIVHRDLKPENLLLAS 138

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 101 AESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVD 160
           A S+R IGP  + I   +G+G+F                    + ++++K  +       
Sbjct: 2   AISKRHIGP--YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM------- 52
Query: 161 YMKAERDI--LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
           +M+ ER+I  L  + HP I++L     T + + +++++  GG LF ++  +    ED+ R
Sbjct: 53  HMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR 111
Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +  +I+ A+ + H+  IVHRDLKPEN+L+D + +V  A
Sbjct: 112 RFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIA 150

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G+++I + +G+G+F                    A+K++ K  + K +    ++ E   L
Sbjct: 14  GNYQIVKTLGEGSFGKVKLAYHTTTGQKV-----ALKIINKKVLAKSDMQGRIEREISYL 68
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP I++L    +++ ++ +++++  G  LF ++ ++    E +AR +  +I+SAV 
Sbjct: 69  RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLKPEN+L+D   +V  A
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIA 155

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G+++I + +G+G+F                    A+K++ K  + K +    ++ E   L
Sbjct: 13  GNYQIVKTLGEGSFGKVKLAYHTTTGQKV-----ALKIINKKVLAKSDMQGRIEREISYL 67
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP I++L    +++ ++ +++++  G  LF ++ ++    E +AR +  +I+SAV 
Sbjct: 68  RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLKPEN+L+D   +V  A
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIA 154

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G+++I + +G+G+F                    A+K++ K  + K +    ++ E   L
Sbjct: 4   GNYQIVKTLGEGSFGKVKLAYHTTTGQKV-----ALKIINKKVLAKSDMQGRIEREISYL 58
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP I++L    +++ ++ +++++  G  LF ++ ++    E +AR +  +I+SAV 
Sbjct: 59  RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLKPEN+L+D   +V  A
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIA 145

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 160 DYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQA 217
           D+ K ER+  I  K+ HP IV+L  S Q  S  YL+ D + GG LF  +  +  + E  A
Sbjct: 48  DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA 107
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
                +I+ ++++ H  GIVHR+LKPEN+L+ S
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           RV+G+G+F                    A+KV+ K  + +K   + +  E  +L ++ HP
Sbjct: 56  RVLGKGSFGEVILCKDKITGQEC-----AVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
            I++L   F+ +   YL+ +   GG LF  +  +  F E  A     +++S ++++HK  
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 236 IVHRDLKPENILMDS 250
           IVHRDLKPEN+L++S
Sbjct: 171 IVHRDLKPENLLLES 185

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           RV+G+G+F                    A+KV+ K  + +K   + +  E  +L ++ HP
Sbjct: 55  RVLGKGSFGEVILCKDKITGQEC-----AVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
            I++L   F+ +   YL+ +   GG LF  +  +  F E  A     +++S ++++HK  
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 236 IVHRDLKPENILMDS 250
           IVHRDLKPEN+L++S
Sbjct: 170 IVHRDLKPENLLLES 184

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 160 DYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQA 217
           D+ K ER+  I  K+ HP IV+L  S Q  S  YL+ D + GG LF  +  +  + E  A
Sbjct: 48  DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA 107
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
                +I+ ++++ H  GIVHR+LKPEN+L+ S
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 160 DYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQA 217
           D+ K ER+  I  K+ HP IV+L  S Q  S  YL+ D + GG LF  +  +  + E  A
Sbjct: 47  DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA 106
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
                +I+ ++++ H  GIVHR+LKPEN+L+ S
Sbjct: 107 SHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 139

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G+++I + +G+G+F                    A+K++ K  + K +    ++ E   L
Sbjct: 8   GNYQIVKTLGEGSFGKVKLAYHTTTGQKV-----ALKIINKKVLAKSDMQGRIEREISYL 62
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP I++L    +++ ++ +++++  G  LF ++ ++    E +AR +  +I+SAV 
Sbjct: 63  RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + H+  IVHRDLKPEN+L+D   +V  A
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIA 149

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YA+KV+ K +   K+    ++ E ++L K+ HP I++L    +  S  Y++ +   GG L
Sbjct: 50  YAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
           F  + ++  F E  A     ++ S ++++HK  IVHRDLKPENIL++S
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           ++++F  +G+GAF                   YA  ++    +  ++H   ++ E  I  
Sbjct: 12  EYQLFEELGKGAFSVVRRCVKVLAGQE-----YAAMIINTKKLSARDH-QKLEREARICR 65
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP IV+L  S       YLI D + GG LF  +  +  + E  A     +I+ AV H
Sbjct: 66  LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125
Query: 231 LHKCGIVHRDLKPENILMDS 250
            H+ G+VHR+LKPEN+L+ S
Sbjct: 126 CHQMGVVHRNLKPENLLLAS 145

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           RV+G+G+F                    A+KV+ K  + +K   + +  E  +L ++ HP
Sbjct: 32  RVLGKGSFGEVILCKDKITGQEC-----AVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
            I++L   F+ +   YL+ +   GG LF  +  +  F E  A     +++S ++++HK  
Sbjct: 87  NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 236 IVHRDLKPENILMDS 250
           IVHRDLKPEN+L++S
Sbjct: 147 IVHRDLKPENLLLES 161

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           ++ E +IL K+ HP I++++  F      Y++L+ + GG LF  +      +E   + Y 
Sbjct: 68  VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            +++ AV +LH+ GI+HRDLKPEN+L+ S
Sbjct: 127 YQMLLAVQYLHENGIIHRDLKPENVLLSS 155

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           ++ E +IL K+ HP I++++  F      Y++L+ + GG LF  +      +E   + Y 
Sbjct: 62  VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            +++ AV +LH+ GI+HRDLKPEN+L+ S
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSS 149

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           ++ E +IL K+ HP I++++  F      Y++L+ + GG LF  +      +E   + Y 
Sbjct: 61  VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            +++ AV +LH+ GI+HRDLKPEN+L+ S
Sbjct: 120 YQMLLAVQYLHENGIIHRDLKPENVLLSS 148

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           ++ E +IL K+ HP I++++  F      Y++L+ + GG LF  +      +E   + Y 
Sbjct: 62  VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            +++ AV +LH+ GI+HRDLKPEN+L+ S
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSS 149

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           ++ E +IL K+ HP I++++  F      Y++L+ + GG LF  +      +E   + Y 
Sbjct: 62  VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            +++ AV +LH+ GI+HRDLKPEN+L+ S
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSS 149

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K++RK ++   ++   ++ E  +L  + HP I++L   F+ +   YL+++   GG LF
Sbjct: 66  AIKIIRKTSVSTSSNSKLLE-EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124
Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
             +  +  F E  A     +++S V++LHK  IVHRDLKPEN+L++S
Sbjct: 125 DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLES 171

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           RV+G+G+F                    A+KV+ K  + +K   + +  E  +L ++ HP
Sbjct: 38  RVLGKGSFGEVILCKDKITGQEC-----AVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
            I++L   F+ +   YL+ +   GG LF  +  +  F E  A     +++S ++++HK  
Sbjct: 93  NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 236 IVHRDLKPENILMDS 250
           IVHRDLKPEN+L++S
Sbjct: 153 IVHRDLKPENLLLES 167

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           ++ E +IL K+ HP I++++  F      Y++L+ + GG LF  +      +E   + Y 
Sbjct: 187 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            +++ AV +LH+ GI+HRDLKPEN+L+ S
Sbjct: 246 YQMLLAVQYLHENGIIHRDLKPENVLLSS 274

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YA+KV+ K +   K+    ++ E ++L K+ HP I++L    +  S  Y++ +   GG L
Sbjct: 50  YAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
           F  + ++  F E  A     ++ S ++++HK  IVHRDLKPENIL++S
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YA+KV+ K +   K+    ++ E ++L K+ HP I++L    +  S  Y++ +   GG L
Sbjct: 50  YAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
           F  + ++  F E  A     ++ S ++++HK  IVHRDLKPENIL++S
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           ++ E +IL K+ HP I++++  F      Y++L+ + GG LF  +      +E   + Y 
Sbjct: 201 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDS 250
            +++ AV +LH+ GI+HRDLKPEN+L+ S
Sbjct: 260 YQMLLAVQYLHENGIIHRDLKPENVLLSS 288

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           +++++  +G+GAF                   YA K++    +  ++H   ++ E  I  
Sbjct: 5   EYQLYEDIGKGAFSVVRRCVKLCTGHE-----YAAKIINTKKLSARDH-QKLEREARICR 58
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + H  IV+L  S       YL+ D + GG LF  +  +  + E  A     +I+ AV H
Sbjct: 59  LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 231 LHKCGIVHRDLKPENILMDS 250
            H+ G+VHRDLKPEN+L+ S
Sbjct: 119 CHQMGVVHRDLKPENLLLAS 138

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILT--KVTHPFIVQLRYSFQTRSKLYLILDFING 199
           + A+K + +   I +N       +R+I+    + HP IV+ +    T + L +I+++ +G
Sbjct: 47  LVAVKYIERGAAIDEN------VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASG 100
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           G L+  +   G F ED+ARF+  +++S VS+ H   I HRDLK EN L+D
Sbjct: 101 GELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLD 150

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           RV+G+G+F                    A+KV+ K  + +K   + +  E  +L ++ HP
Sbjct: 32  RVLGKGSFGEVILCKDKITGQEC-----AVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
            I +L   F+ +   YL+ +   GG LF  +  +  F E  A     +++S +++ HK  
Sbjct: 87  NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 236 IVHRDLKPENILMDS 250
           IVHRDLKPEN+L++S
Sbjct: 147 IVHRDLKPENLLLES 161

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 102 ESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDY 161
           + E KIG   F++ R +G GA+                    A+KV++K    K  + D 
Sbjct: 29  KKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEK-----AIKVIKKSQFDKGRYSDD 82
Query: 162 MKA----------ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI 211
            K           E  +L  + HP I++L   F+ +   YL+ +F  GG LF  +  +  
Sbjct: 83  NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK 142
Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           F E  A     +I+S + +LHK  IVHRD+KPENIL+++   ++
Sbjct: 143 FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLL 186

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT- 170
           +E+ + +G G F                  + A+K + +   I +N       +R+I+  
Sbjct: 21  YELVKDIGSGNFGVARLMRDKQSNE-----LVAVKYIERGEKIDEN------VKREIINH 69
Query: 171 -KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+ +    T + L +++++ +GG LF  +   G F ED+ARF+  +++S VS
Sbjct: 70  RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           + H   + HRDLK EN L+D 
Sbjct: 130 YCHAMQVCHRDLKLENTLLDG 150

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT- 170
           +E+ + +G G F                  + A+K + +   I +N       +R+I+  
Sbjct: 20  YELVKDIGSGNFGVARLMRDKQSNE-----LVAVKYIERGEKIDEN------VKREIINH 68
Query: 171 -KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+ +    T + L +++++ +GG LF  +   G F ED+ARF+  +++S VS
Sbjct: 69  RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 128
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           + H   + HRDLK EN L+D 
Sbjct: 129 YCHAMQVCHRDLKLENTLLDG 149

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT- 170
           +E+ + +G G F                  + A+K + +   I +N       +R+I+  
Sbjct: 21  YELVKDIGSGNFGVARLMRDKQSNE-----LVAVKYIERGEKIDEN------VKREIINH 69
Query: 171 -KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+ +    T + L +++++ +GG LF  +   G F ED+ARF+  +++S VS
Sbjct: 70  RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           + H   + HRDLK EN L+D 
Sbjct: 130 YCHAMQVCHRDLKLENTLLDG 150

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT- 170
           +E+ + +G G F                  + A+K + +   I  N       +R+I+  
Sbjct: 21  YELVKDIGSGNFGVARLMRDKQSNE-----LVAVKYIERGEKIAAN------VKREIINH 69
Query: 171 -KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+ +    T + L +++++ +GG LF  +   G F ED+ARF+  +++S VS
Sbjct: 70  RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           + H   + HRDLK EN L+D 
Sbjct: 130 YCHAMQVCHRDLKLENTLLDG 150

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT- 170
           +E+ + +G G F                  + A+K + +   I +N       +R+I+  
Sbjct: 21  YELVKDIGAGNFGVARLMRDKQANE-----LVAVKYIERGEKIDEN------VKREIINH 69
Query: 171 -KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+ +    T + L +++++ +GG LF  +   G F ED+ARF+  +++S VS
Sbjct: 70  RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           + H   + HRDLK EN L+D 
Sbjct: 130 YAHAMQVAHRDLKLENTLLDG 150

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 163 KAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           + E  IL +V  HP I+ L  S+++ S ++L+ D +  G LF +L  +    E + R   
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM 206
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             ++ AVS LH   IVHRDLKPENIL+D +  +
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDDNMQI 239

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI R +G+G F                  I A+KV+ K  I K+     ++ E +I  
Sbjct: 24  DFEIGRPLGKGKFGNVYLAREKKSHF-----IVALKVLFKSQIEKEGVEHQLRREIEIQA 78
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP I++L   F  R ++YLIL++   G L+  L +   F E +      E+  A+ +
Sbjct: 79  HLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMY 138
Query: 231 LHKCGIVHRDLKPEN 245
            H   ++HRD+KPEN
Sbjct: 139 CHGKKVIHRDIKPEN 153

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 105 RKIGPGDF-EIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           R + P DF EI   +G GAF                  + A KV+  DT  ++   DYM 
Sbjct: 31  RDLNPEDFWEIIGELGDGAFGKVYKAQNKETSV-----LAAAKVI--DTKSEEELEDYM- 82
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL---FFHLYRQGIFREDQARFY 220
            E DIL    HP IV+L  +F   + L+++++F  GG +      L R     E Q +  
Sbjct: 83  VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVV 140
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             + + A+++LH   I+HRDLK  NIL   DG +  A
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 105 RKIGPGDF-EIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           R + P DF EI   +G GAF                  + A KV+  DT  ++   DYM 
Sbjct: 31  RDLNPEDFWEIIGELGDGAFGKVYKAQNKETSV-----LAAAKVI--DTKSEEELEDYM- 82
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL---FFHLYRQGIFREDQARFY 220
            E DIL    HP IV+L  +F   + L+++++F  GG +      L R     E Q +  
Sbjct: 83  VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVV 140
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             + + A+++LH   I+HRDLK  NIL   DG +  A
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 105 RKIGPGDF-EIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           R + P DF EI   +G GAF                  + A KV+  DT  ++   DYM 
Sbjct: 31  RDLNPEDFWEIIGELGDGAFGKVYKAQNKETSV-----LAAAKVI--DTKSEEELEDYM- 82
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL---FFHLYRQGIFREDQARFY 220
            E DIL    HP IV+L  +F   + L+++++F  GG +      L R     E Q +  
Sbjct: 83  VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVV 140
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             + + A+++LH   I+HRDLK  NIL   DG +  A
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 81  SSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXX 140
           SS + L  + L  ++  E   E   ++G G F I R   Q                    
Sbjct: 8   SSGVDLGTENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKE-------------- 53
Query: 141 XIYAMKVMRKDTIIK-KNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFI 197
             YA K ++K  +   +  V   + ER+  IL ++ HP I+ L   F+ ++ + LIL+ +
Sbjct: 54  --YAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELV 111
Query: 198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           +GG LF  L  +    ED+A  +  +I+  V +LH   I H DLKPENI++
Sbjct: 112 SGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 162

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 112 FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVM--RKDTIIKKNHVDYMKAERDIL 169
           +E+  V+G+GAF                   +A+K++   K T       + +K E  I 
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQ-----FAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAEIV 225
             + HP IV+L  ++ +   LY++ +F++G  L F + ++     ++ E  A  Y  +I+
Sbjct: 81  HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 226 SAVSHLHKCGIVHRDLKPENILMDS 250
            A+ + H   I+HRD+KPEN+L+ S
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLAS 165

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 26/140 (18%)
Query: 143 YAMKVMRKDTIIK-----------------------KNHVDYMKAERDILTKVTHPFIVQ 179
           YAMKV+ K  +I+                       +  ++ +  E  IL K+ HP +V+
Sbjct: 41  YAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVK 100
Query: 180 LRYSFQTRSK--LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIV 237
           L       ++  LY++ + +N G +   +       EDQARFY  +++  + +LH   I+
Sbjct: 101 LVEVLDDPNEDHLYMVFELVNQGPVM-EVPTLKPLSEDQARFYFQDLIKGIEYLHYQKII 159
Query: 238 HRDLKPENILMDSDGHVMAA 257
           HRD+KP N+L+  DGH+  A
Sbjct: 160 HRDIKPSNLLVGEDGHIKIA 179

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 54/87 (62%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           ++ E  IL +V HP I+ L   ++ R+ + LIL+ ++GG LF  L ++    E++A  + 
Sbjct: 62  IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILM 248
            +I+  V++LH   I H DLKPENI++
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIML 148

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKDTIIK-KNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  +   +  V   + ER+  IL ++ HP I+ L   F+ ++ + LIL+ ++G
Sbjct: 33  YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 92
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    ED+A  +  +I+  V +LH   I H DLKPENI++
Sbjct: 93  GELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 141

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKDTIIK-KNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  +   +  V   + ER+  IL ++ HP I+ L   F+ ++ + LIL+ ++G
Sbjct: 40  YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 99
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    ED+A  +  +I+  V +LH   I H DLKPENI++
Sbjct: 100 GELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 148

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YA+KV      I K+  D  +    +L    HP I+ L+  +     +YL+ + + GG L
Sbjct: 55  YAVKV------IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL-MDSDGH 253
              + RQ  F E +A F    I   V +LH  G+VHRDLKP NIL +D  G+
Sbjct: 109 LDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL 202
           YA+KV      I K+  D  +    +L    HP I+ L+  +     +YL+ + + GG L
Sbjct: 55  YAVKV------IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL-MDSDGH 253
              + RQ  F E +A F    I   V +LH  G+VHRDLKP NIL +D  G+
Sbjct: 109 LDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 38  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 97
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 98  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 38  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 97
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 98  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LIL+ + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF++  ++G+G+F                    A+K++ K  + K   V  ++ E  I  
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEV-----AIKMIDKKAMYKAGMVQRVQNEVKIHC 66
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-RQGIFREDQARFYTAEIVSAVS 229
           ++ HP I++L   F+  + +YL+L+  + G +  +L  R   F E++AR +  +I++ + 
Sbjct: 67  QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +LH  GI+HRDL   N+L+  + ++  A
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIA 154

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRK-DTIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  +   +  V   + ER+  IL +V H  ++ L   ++ R+ + LIL+ ++G
Sbjct: 40  YAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSG 99
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L ++    E++A  +  +I+  V++LH   I H DLKPENI++
Sbjct: 100 GELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRK-DTIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  +   +  V   + ER+  IL +V H  ++ L   ++ R+ + LIL+ ++G
Sbjct: 40  YAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSG 99
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L ++    E++A  +  +I+  V++LH   I H DLKPENI++
Sbjct: 100 GELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRK-DTIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  +   +  V   + ER+  IL +V H  ++ L   ++ R+ + LIL+ ++G
Sbjct: 40  YAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSG 99
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L ++    E++A  +  +I+  V++LH   I H DLKPENI++
Sbjct: 100 GELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRK-DTIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  +   +  V   + ER+  IL +V H  ++ L   ++ R+ + LIL+ ++G
Sbjct: 40  YAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSG 99
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L ++    E++A  +  +I+  V++LH   I H DLKPENI++
Sbjct: 100 GELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRK-DTIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  +   +  V   + ER+  IL +V H  ++ L   ++ R+ + LIL+ ++G
Sbjct: 40  YAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSG 99
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L ++    E++A  +  +I+  V++LH   I H DLKPENI++
Sbjct: 100 GELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 153 IIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIF 212
           II K+  D  +    +L    HP I+ L+  +     +Y++ + + GG L   + RQ  F
Sbjct: 54  IIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFF 113
Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL-MDSDGH 253
            E +A      I   V +LH  G+VHRDLKP NIL +D  G+
Sbjct: 114 SEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 109 PGDFEIF-----RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           PG FE        ++G+GA+                   YA+K++ K     ++ V   +
Sbjct: 7   PGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKE-----YAVKIIEKQAGHSRSRV--FR 59
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
               +     +  I++L   F+  ++ YL+ + + GG +  H+ +Q  F E +A     +
Sbjct: 60  EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRD 119
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDS 250
           + +A+  LH  GI HRDLKPENIL +S
Sbjct: 120 VAAALDFLHTKGIAHRDLKPENILCES 146

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 143 YAMKVMRKD-TIIKKNHVDYMKAERD--ILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           YA K ++K  T   +  V     ER+  IL ++ HP ++ L   ++ ++ + LI + + G
Sbjct: 39  YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAG 98
Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           G LF  L  +    E++A  +  +I++ V +LH   I H DLKPENI++
Sbjct: 99  GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 153 IIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIF 212
           II K+  D  +    +L    HP I+ L+  +     +Y++ +   GG L   + RQ  F
Sbjct: 54  IIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFF 113
Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL-MDSDGH 253
            E +A      I   V +LH  G+VHRDLKP NIL +D  G+
Sbjct: 114 SEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG----IFREDQA 217
           +K E  I   + HP IV+L  ++ +   LY++ +F++G  L F + ++     ++ E  A
Sbjct: 75  LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
             Y  +I+ A+ + H   I+HRD+KP  +L+ S
Sbjct: 135 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS 167

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A K+++   +  K  V   K E  ++ ++ H  ++QL  +F++++ + L++++++GG LF
Sbjct: 118 AAKIIKTRGMKDKEEV---KNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174
Query: 204 FHLYRQGI-FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL 247
             +  +     E     +  +I   + H+H+  I+H DLKPENIL
Sbjct: 175 DRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENIL 219

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG----IFREDQA 217
           +K E  I   + HP IV+L  ++ +   LY++ +F++G  L F + ++     ++ E  A
Sbjct: 73  LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
             Y  +I+ A+ + H   I+HRD+KP  +L+ S
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS 165

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 144 AMKVMRKDTIIKKNHVD---YMKAERDILTKVT----HPFIVQLRYSFQTRSKLYLILDF 196
           A+KV+ ++ ++  + +        E  +L KV     HP +++L   F+T+    L+L+ 
Sbjct: 60  AIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLER 119
Query: 197 -INGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
            +    LF ++  +G   E  +R +  ++V+A+ H H  G+VHRD+K ENIL+D
Sbjct: 120 PLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID 173

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 105 RKIGPGD-FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           R + P + +EI   +G GAF                  + A KV+  +T  ++   DY+ 
Sbjct: 5   RDLDPNEVWEIVGELGDGAFGKVYKAKNKETGA-----LAAAKVI--ETKSEEELEDYI- 56
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH---LFFHLYRQGIFREDQARFY 220
            E +IL    HP+IV+L  ++    KL+++++F  GG    +   L R     E Q +  
Sbjct: 57  VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVV 114
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             +++ A++ LH   I+HRDLK  N+LM  +G +  A
Sbjct: 115 CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 151

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 105 RKIGPGD-FEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK 163
           R + P + +EI   +G GAF                  + A KV+  +T  ++   DY+ 
Sbjct: 13  RDLDPNEVWEIVGELGDGAFGKVYKAKNKETGA-----LAAAKVI--ETKSEEELEDYI- 64
Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH---LFFHLYRQGIFREDQARFY 220
            E +IL    HP+IV+L  ++    KL+++++F  GG    +   L R     E Q +  
Sbjct: 65  VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVV 122
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             +++ A++ LH   I+HRDLK  N+LM  +G +  A
Sbjct: 123 CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 159

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFY 220
           +K E  I+ ++ HP ++ L  +F+ + ++ LIL+F++GG LF  +  +     E +   Y
Sbjct: 95  VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY 154
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
             +    + H+H+  IVH D+KPENI+ ++
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCET 184

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFY 220
           ++ E   ++ + HP +V L  +F+  +++ +I +F++GG LF  +  +     ED+A  Y
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY 260
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENIL 247
             ++   + H+H+   VH DLKPENI+
Sbjct: 261 MRQVCKGLCHMHENNYVHLDLKPENIM 287

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 156 KNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL--------Y 207
           +  +D +  E   +++  HP IV    SF  + +L+L++  ++GG +   +        +
Sbjct: 54  QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 113
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + G+  E        E++  + +LHK G +HRD+K  NIL+  DG V  A
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA 163

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFY 220
           ++ E   ++ + HP +V L  +F+  +++ +I +F++GG LF  +  +     ED+A  Y
Sbjct: 95  VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY 154
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENIL 247
             ++   + H+H+   VH DLKPENI+
Sbjct: 155 MRQVCKGLCHMHENNYVHLDLKPENIM 181

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 156 KNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL--------Y 207
           +  +D +  E   +++  HP IV    SF  + +L+L++  ++GG +   +        +
Sbjct: 49  QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 108
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           + G+  E        E++  + +LHK G +HRD+K  NIL+  DG V  A
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA 158

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 154 IKKNHVDYMKAERDI-LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIF 212
           +KK  ++  +AE  +    +T P IV L  + +    + + ++ + GG L   +  QG  
Sbjct: 123 VKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCL 182
Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            ED+A +Y  + +  + +LH   I+H D+K +N+L+ SDG
Sbjct: 183 PEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDG 222

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 154 IKKNHVDYMKAERDI-LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIF 212
           +KK  ++  +AE  +    +T P IV L  + +    + + ++ + GG L   +  QG  
Sbjct: 104 VKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCL 163
Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            ED+A +Y  + +  + +LH   I+H D+K +N+L+ SDG
Sbjct: 164 PEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDG 203

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 168 ILTKVTHPF--IVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGIFREDQARFYTAEI 224
           +L KV+  F  +++L   F+      LIL+ +     LF  +  +G  +E+ AR +  ++
Sbjct: 64  LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 225 VSAVSHLHKCGIVHRDLKPENILMD 249
           + AV H H CG++HRD+K ENIL+D
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILID 148

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           + YL+ + + GG +  H++++  F E +A     ++ SA+  LH  GI HRDLKPENIL 
Sbjct: 85  RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 249 D 249
           +
Sbjct: 145 E 145

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           + YL+ + + GG +  H++++  F E +A     ++ SA+  LH  GI HRDLKPENIL 
Sbjct: 85  RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 249 D 249
           +
Sbjct: 145 E 145

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           ++++H  IV +    +     YL++++I G  L  ++   G    D A  +T +I+  + 
Sbjct: 66  SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK 125
Query: 230 HLHKCGIVHRDLKPENILMDSD 251
           H H   IVHRD+KP+NIL+DS+
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSN 147

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMD 249
           +LH  GI HRD+KPEN+L+D
Sbjct: 119 YLHGIGITHRDIKPENLLLD 138

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 119
Query: 230 HLHKCGIVHRDLKPENILMD 249
           +LH  GI HRD+KPEN+L+D
Sbjct: 120 YLHGIGITHRDIKPENLLLD 139

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 52  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 111
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 112 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 163

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 53  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 112
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 113 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 164

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 66  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 125
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 126 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 177

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L++    ++ +   S+   SKL++I++++ GG     L R G F E Q      EI
Sbjct: 71  EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSAL-DLLRAGPFDEFQIATMLKEI 129
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  + +LH    +HRD+K  N+L+   G V  A
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLA 162

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 52  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 111
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 112 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 163

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 53  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 112
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 113 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 164

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 38  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 97
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 98  PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 149

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 66  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 125
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 126 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 177

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 65  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 124
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 125 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 176

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 65  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 124
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 125 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 176

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 66  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 125
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 126 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 177

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 80  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 191

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 66  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 125
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 126 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 177

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 53  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 112
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 113 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 164

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 72  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 131
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 132 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 183

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 85  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 144
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 145 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 196

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 65  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 124
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 125 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 176

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 80  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 191

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 168 ILTKVTHPF--IVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGIFREDQARFYTAEI 224
           +L KV+  F  +++L   F+      LIL+       LF  +  +G  +E+ AR +  ++
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 225 VSAVSHLHKCGIVHRDLKPENILMD 249
           + AV H H CG++HRD+K ENIL+D
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILID 191

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 65  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 124
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 125 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 176

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 168 ILTKVTHPF--IVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGIFREDQARFYTAEI 224
           +L KV+  F  +++L   F+      LIL+       LF  +  +G  +E+ AR +  ++
Sbjct: 65  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 225 VSAVSHLHKCGIVHRDLKPENILMD 249
           + AV H H CG++HRD+K ENIL+D
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILID 149

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 168 ILTKVTHPF--IVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGIFREDQARFYTAEI 224
           +L KV+  F  +++L   F+      LIL+       LF  +  +G  +E+ AR +  ++
Sbjct: 65  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 225 VSAVSHLHKCGIVHRDLKPENILMD 249
           + AV H H CG++HRD+K ENIL+D
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILID 149

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 168 ILTKVTHPF--IVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGIFREDQARFYTAEI 224
           +L KV+  F  +++L   F+      LIL+       LF  +  +G  +E+ AR +  ++
Sbjct: 64  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 225 VSAVSHLHKCGIVHRDLKPENILMD 249
           + AV H H CG++HRD+K ENIL+D
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILID 148

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 60  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 119
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 120 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 171

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEIXINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 119
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 120 YLHGIGITHRDIKPENLLLDE 140

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 119
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 120 YLHGIGITHRDIKPENLLLDE 140

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 119
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 120 YLHGIGITHRDIKPENLLLDE 140

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEIXINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 168 ILTKVTHPF--IVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGIFREDQARFYTAEI 224
           +L KV+  F  +++L   F+      LIL+       LF  +  +G  +E+ AR +  ++
Sbjct: 63  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 225 VSAVSHLHKCGIVHRDLKPENILMD 249
           + AV H H CG++HRD+K ENIL+D
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILID 147

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEIXINK 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 119
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 120 YLHGIGITHRDIKPENLLLDE 140

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 33  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 92
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 93  PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 144

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 33  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 92
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H CG++HRD+K ENIL+D
Sbjct: 93  PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 144

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINA 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 119
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 120 YLHGIGITHRDIKPENLLLDE 140

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 104 ERKIGPGDF-EIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYM 162
           E+KIG G F E++R                         +   KV   D +  K   D +
Sbjct: 37  EKKIGRGQFSEVYRAA----------------CLLDGVPVALKKVQIFDLMDAKARADCI 80
Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL---FFHLYRQG-IFREDQAR 218
           K E D+L ++ HP +++   SF   ++L ++L+  + G L     H  +Q  +  E    
Sbjct: 81  K-EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            Y  ++ SA+ H+H   ++HRD+KP N+ + + G V
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVV 175

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 58
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 59  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 117
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 118 YLHGIGITHRDIKPENLLLDE 138

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 119
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 120 YLHGIGITHRDIKPENLLLDE 140

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A K++ K  ++K +  + M  E  I   + H  +V     F+    ++++L+      
Sbjct: 48  VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 107
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR+Y  +IV    +LH+  ++HRDLK  N+ ++ D  V
Sbjct: 108 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 160

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A K++ K  ++K +  + M  E  I   + H  +V     F+    ++++L+      
Sbjct: 68  VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 127
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR+Y  +IV    +LH+  ++HRDLK  N+ ++ D  V
Sbjct: 128 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 180

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 60
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 119
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 120 YLHGIGITHRDIKPENLLLDE 140

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A K++ K  ++K +  + M  E  I   + H  +V     F+    ++++L+      
Sbjct: 66  VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 125
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR+Y  +IV    +LH+  ++HRDLK  N+ ++ D  V
Sbjct: 126 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 178

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ + +G+GA+                  I  MK   +     +N    +K E  I  
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPEN----IKKEICINK 59
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + H  +V+     +  +  YL L++ +GG LF  +    G+   D  RF+  ++++ V 
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVV 118
Query: 230 HLHKCGIVHRDLKPENILMDS 250
           +LH  GI HRD+KPEN+L+D 
Sbjct: 119 YLHGIGITHRDIKPENLLLDE 139

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A K++ K  ++K +  + M  E  I   + H  +V     F+    ++++L+      
Sbjct: 44  VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 103
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR+Y  +IV    +LH+  ++HRDLK  N+ ++ D  V
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 156

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A K++ K  ++K +  + M  E  I   + H  +V     F+    ++++L+      
Sbjct: 44  VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 103
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR+Y  +IV    +LH+  ++HRDLK  N+ ++ D  V
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 156

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           ++K  + K+   + +  E  I+    H  +V +  S+    +L+++++F+ GG L   + 
Sbjct: 75  VKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT-DIV 133
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 E+Q       ++ A+S+LH  G++HRD+K ++IL+ SDG +
Sbjct: 134 THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRI 180

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A K++ K  ++K +  + M  E  I   + H  +V     F+    ++++L+      
Sbjct: 42  VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 101
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR+Y  +IV    +LH+  ++HRDLK  N+ ++ D  V
Sbjct: 102 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 154

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L++   P++ +   S+   +KL++I++++ GG     L   G   E Q      EI
Sbjct: 70  EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREI 128
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  + +LH    +HRD+K  N+L+   G V  A
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 161

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 155 KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRE 214
           K+   + +  E  I+    H  +V++  S+    +L+++++F+ GG L   +  Q    E
Sbjct: 82  KQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQVRLNE 140
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +Q       ++ A+++LH  G++HRD+K ++IL+  DG V
Sbjct: 141 EQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRV 180

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 154 IKKNHVDYMKAERDI-LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIF 212
           +KK  ++  + E  +    ++ P IV L  + +    + + ++ + GG L   + + G  
Sbjct: 88  VKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCL 147
Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            ED+A +Y  + +  + +LH   I+H D+K +N+L+ SDG
Sbjct: 148 PEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG 187

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 154 IKKNHVDYMKAERDI-LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIF 212
           +KK  ++  + E  +    ++ P IV L  + +    + + ++ + GG L   + + G  
Sbjct: 104 VKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCL 163
Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            ED+A +Y  + +  + +LH   I+H D+K +N+L+ SDG
Sbjct: 164 PEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG 203

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L++   P++ +   S+   +KL++I++++ GG     L   G   E Q      EI
Sbjct: 75  EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREI 133
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  + +LH    +HRD+K  N+L+   G V  A
Sbjct: 134 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 166

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 154 IKKNHVDYMKAERDI-LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIF 212
           +KK  ++  + E  +    ++ P IV L  + +    + + ++ + GG L   + + G  
Sbjct: 102 VKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCL 161
Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            ED+A +Y  + +  + +LH   I+H D+K +N+L+ SDG
Sbjct: 162 PEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG 201

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L++   P++ +   S+   +KL++I++++ GG     L   G   E Q      EI
Sbjct: 55  EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREI 113
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  + +LH    +HRD+K  N+L+   G V  A
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 39/168 (23%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA----ERDILTK 171
           +V+G G+F                  +Y  K+     ++    V   KA    E  I+ K
Sbjct: 26  KVIGNGSFGV----------------VYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRK 69
Query: 172 VTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQG--IFREDQ------A 217
           + H  IV+LRY F +  +      L L+LD++        +YR      R  Q       
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-----TVYRVARHYSRAKQTLPVIYV 124
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
           + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L++   P++ +   S+   +KL++I++++ GG     L   G   E Q      EI
Sbjct: 55  EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREI 113
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  + +LH    +HRD+K  N+L+   G V  A
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
           ++ ++AE ++L  + HP I+++   F+    +Y++++   GG L   +       +  + 
Sbjct: 64  MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 219 FYTAEIV----SAVSHLHKCGIVHRDLKPENIL 247
            Y AE++    +A+++ H   +VH+DLKPENIL
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENIL 156

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 42/152 (27%)
Query: 142 IYAMKVMRKDTI--IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           I A+K+M K+ I  I    V+ +K E  ++ K+ HP I +L   ++    + L+++  +G
Sbjct: 53  IRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHG 112
Query: 200 GHLF-------------------------------------FHLYRQG---IFREDQARF 219
           GHL                                       H +R+    + RE     
Sbjct: 113 GHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN 172
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
              +I SA+ +LH  GI HRD+KPEN L  ++
Sbjct: 173 IMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 25/159 (15%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE   V+GQGAF                   YA+K +R      +  +  + +E  +L 
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRY-----YAIKKIRH----TEEKLSTILSEVMLLA 57
Query: 171 KVTHPFIVQLRYSF-------------QTRSKLYLILDFINGGHLFFHLYRQGIF--RED 215
            + H ++V+   ++             + +S L++ +++   G L+  ++ + +   R++
Sbjct: 58  SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             R +  +I+ A+S++H  GI+HRDLKP NI +D   +V
Sbjct: 118 YWRLFR-QILEALSYIHSQGIIHRDLKPMNIFIDESRNV 155

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A KV+ K  ++K +  + M  E  I   + +P +V     F+    +Y++L+      
Sbjct: 69  VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR++  + +  V +LH   ++HRDLK  N+ ++ D  V
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDV 181

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A KV+ K  ++K +  + M  E  I   + +P +V     F+    +Y++L+      
Sbjct: 69  VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR++  + +  V +LH   ++HRDLK  N+ ++ D  V
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDV 181

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A KV+ K  ++K +  + M  E  I   + +P +V     F+    +Y++L+      
Sbjct: 69  VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR++  + +  V +LH   ++HRDLK  N+ ++ D  V
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDV 181

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           ++K  + K+   + +  E  I+    H  +V++  S+    +L+++++F+ GG L   + 
Sbjct: 181 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV 239
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 E+Q       ++ A+S LH  G++HRD+K ++IL+  DG V
Sbjct: 240 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 286

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 191 YLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           YL L++ +GG LF  +    G+   D  RF+  ++++ V +LH  GI HRD+KPEN+L+D
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 250 S 250
Sbjct: 139 E 139

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 157
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 158 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 210

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           ++K  + K+   + +  E  I+    H  +V++  S+    +L+++++F+ GG L   + 
Sbjct: 104 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV 162
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 E+Q       ++ A+S LH  G++HRD+K ++IL+  DG V
Sbjct: 163 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 209

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 91  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 147
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 148 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 200

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 198
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 199 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 251

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 99  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 155
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 156 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 208

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 97  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 153
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 97  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 153
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A KV+ K  ++K +  + M  E  I   + +P +V     F+    +Y++L+      
Sbjct: 53  VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 112
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L     R+    E +AR++  + +  V +LH   ++HRDLK  N+ ++ D  V
Sbjct: 113 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDV 165

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           ++K  + K+   + +  E  I+    H  +V++  S+    +L+++++F+ GG L   + 
Sbjct: 61  VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV 119
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 E+Q       ++ A+S LH  G++HRD+K ++IL+  DG V
Sbjct: 120 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 166

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           ++K  + K+   + +  E  I+    H  +V++  S+    +L+++++F+ GG L   + 
Sbjct: 59  VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV 117
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 E+Q       ++ A+S LH  G++HRD+K ++IL+  DG V
Sbjct: 118 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 164

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKA----ERDILTKVTHPFIVQLRYSFQTRSK------LY 191
           +Y  K+     ++    V   KA    E  I+ K+ H  IV+LRY F +  +      L 
Sbjct: 36  VYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95
Query: 192 LILDFINGGHLFFHLYRQGIFREDQ------ARFYTAEIVSAVSHLHKCGIVHRDLKPEN 245
           L+LD++      + + R    R  Q       + Y  ++  +++++H  GI HRD+KP+N
Sbjct: 96  LVLDYVP--ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 152
Query: 246 ILMDSDGHVMAAHSLNSHNQ 265
           +L+D D  V+      S  Q
Sbjct: 153 LLLDPDTAVLKLCDFGSAKQ 172

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           ++K  + K+   + +  E  I+    H  +V++  S+    +L+++++F+ GG L   + 
Sbjct: 54  VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV 112
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 E+Q       ++ A+S LH  G++HRD+K ++IL+  DG V
Sbjct: 113 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 159

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           ++K  + K+   + +  E  I+    H  +V++  S+    +L+++++F+ GG L   + 
Sbjct: 50  VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV 108
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 E+Q       ++ A+S LH  G++HRD+K ++IL+  DG V
Sbjct: 109 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV 155

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 68  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 124
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 125 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 177

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 35/166 (21%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA----ERDILTK 171
           +V+G G+F                  +Y  K+     ++    V   KA    E  I+ K
Sbjct: 26  KVIGNGSFGV----------------VYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRK 69
Query: 172 VTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQ------ARF 219
           + H  IV+LRY F +  +      L L+LD++      + + R    R  Q       + 
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTLPVIYVKL 126
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
           Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 75  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 131
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 82  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV--PETVYRVARH-YSRAKQTL 138
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 139 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 191

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 71  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV--PETVYRVARH-YSRAKQTL 127
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 128 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 180

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 76  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV--PETVYRVARH-YSRAKQTL 132
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 133 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 185

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQ-- 216
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 67  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 123
Query: 217 ----ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 124 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 176

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQA- 217
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 75  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 131
Query: 218 -----RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L ++ HP IV L     +   L L+ +F+           +   ++ Q + Y  ++
Sbjct: 69  EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQL 128
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  V+H H+  I+HRDLKP+N+L++SDG +  A
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLA 161

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L ++ HP IV L     +   L L+ +F+           +   ++ Q + Y  ++
Sbjct: 69  EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQL 128
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  V+H H+  I+HRDLKP+N+L++SDG +  A
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLA 161

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQ-- 216
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 64  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 120
Query: 217 ----ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 121 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 173

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQ-- 216
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 119
Query: 217 ----ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQ-- 216
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 119
Query: 217 ----ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQ-- 216
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 119
Query: 217 ----ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQ-- 216
           E  I+ K+ H  IV+LRY F +  +      L L+LD++      + + R    R  Q  
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARH-YSRAKQTL 119
Query: 217 ----ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
                + Y  ++  +++++H  GI HRD+KP+N+L+D D  V+      S  Q
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L++   P+I +   S+   +KL++I++++ GG     L + G   E        EI
Sbjct: 67  EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSAL-DLLKPGPLEETYIATILREI 125
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  + +LH    +HRD+K  N+L+   G V  A
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLA 158

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 108 GPGDFEIFRVV---GQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           GPG  E F+ V   G+G +                  + A+K +R DT  +      ++ 
Sbjct: 1   GPGSMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIR- 54
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAE 223
           E  +L ++ HP IV+L     T +KLYL+ +F++     F              + Y  +
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQ 114
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 128 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 187
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 188 KPENLLYTS 196

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 82  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 141
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 142 KPENLLYTS 150

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 134 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 193
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 194 KPENLLYTS 202

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 98  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 157
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 158 KPENLLYTS 166

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 82  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 141
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 142 KPENLLYTS 150

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 84  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 144 KPENLLYTS 152

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 90  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 149
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 150 KPENLLYTS 158

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 108 GPGDFEIFRVV---GQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           GPG  E F+ V   G+G +                  + A+K +R DT  +      ++ 
Sbjct: 1   GPGSMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIR- 54
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAE 223
           E  +L ++ HP IV+L     T +KLYL+ +F++     F              + Y  +
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 84  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 144 KPENLLYTS 152

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 89  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 148
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 149 KPENLLYTS 157

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 88  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 147
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 148 KPENLLYTS 156

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 83  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 142
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 143 KPENLLYTS 151

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++++ ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 84  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 144 KPENLLYTS 152

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +++HP I+ L  +F  +S + L+ DF+             +      + Y    
Sbjct: 62  EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  + +LH+  I+HRDLKP N+L+D +G +  A
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLA 154

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 110 GDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G FE+  +VG G +                  + A+KVM     +  +  + +K E ++L
Sbjct: 24  GIFELVELVGNGTYGQVYKGRHVKTGQ-----LAAIKVMD----VTGDEEEEIKQEINML 74
Query: 170 TKVTHPFIVQLRY-SFQTRS------KLYLILDFINGGHL--FFHLYRQGIFREDQARFY 220
            K +H   +   Y +F  ++      +L+L+++F   G +       +    +E+   + 
Sbjct: 75  KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             EI+  +SHLH+  ++HRD+K +N+L+  +  V
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 144 AMKVMRKDTIIKKNHV---DYMKAERDILTKVTHPF--IVQLRYSFQTRSKLYLILDFIN 198
           A+K + KD I     +     +  E  +L KV+  F  +++L   F+      LIL+   
Sbjct: 33  AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 92
Query: 199 GGH-LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
               LF  +  +G  +E+ AR +  +++ AV H H  G++HRD+K ENIL+D
Sbjct: 93  PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILID 144

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 151 DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFH---LY 207
           D +IKK  +  ++    +L ++ HP +V L   F+ + +L+L+ ++ +  H   H    Y
Sbjct: 42  DPVIKKIALREIR----MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD--HTVLHELDRY 95
Query: 208 RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           ++G+  E   +  T + + AV+  HK   +HRD+KPENIL+
Sbjct: 96  QRGV-PEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI 135

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL----YLILDFI 197
           A+KV+R D  + ++   Y++  R+      + HP IV +  + +  +      Y++++++
Sbjct: 41  AVKVLRAD--LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +G  L   ++ +G     +A    A+   A++  H+ GI+HRD+KP NIL+ +   V
Sbjct: 99  DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAV 155

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 162 MKAERDILTKVTHPFIVQLRYSF--QTRSKLYLILDF-INGGHLFFHLYRQGIFREDQAR 218
           +K E  +L ++ H  ++QL      + + K+Y+++++ + G         +  F   QA 
Sbjct: 53  VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAH 112
Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            Y  +++  + +LH  GIVH+D+KP N+L+ + G
Sbjct: 113 GYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG 146

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL----YLILDFI 197
           A+KV+R D  + ++   Y++  R+      + HP IV +  + +  +      Y++++++
Sbjct: 41  AVKVLRAD--LARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +G  L   ++ +G     +A    A+   A++  H+ GI+HRD+KP NI++ +   V
Sbjct: 99  DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV 155

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 33  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL 91
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKPEN+L++++G +  A
Sbjct: 92  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 148

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           +P IV    S+    +L+++++++ GG L   +  +    E Q      E + A+  LH 
Sbjct: 76  NPNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 234 CGIVHRDLKPENILMDSDGHV 254
             ++HRD+K +NIL+  DG V
Sbjct: 135 NQVIHRDIKSDNILLGMDGSV 155

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 32  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 90
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKPEN+L++++G +  A
Sbjct: 91  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 147

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           +P IV    S+    +L+++++++ GG L   +  +    E Q      E + A+  LH 
Sbjct: 76  NPNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 234 CGIVHRDLKPENILMDSDGHV 254
             ++HRD+K +NIL+  DG V
Sbjct: 135 NQVIHRDIKSDNILLGMDGSV 155

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           +P IV    S+    +L+++++++ GG L   +  +    E Q      E + A+  LH 
Sbjct: 76  NPNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 234 CGIVHRDLKPENILMDSDGHV 254
             ++HRD+K +NIL+  DG V
Sbjct: 135 NQVIHRDIKSDNILLGMDGSV 155

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 25/159 (15%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE   V+GQGAF                   YA+K +R      +  +  + +E  +L 
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRY-----YAIKKIRH----TEEKLSTILSEVMLLA 57
Query: 171 KVTHPFIVQLRYSF-------------QTRSKLYLILDFINGGHLFFHLYRQGIF--RED 215
            + H ++V+   ++             + +S L++ +++     L+  ++ + +   R++
Sbjct: 58  SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             R +  +I+ A+S++H  GI+HRDLKP NI +D   +V
Sbjct: 118 YWRLFR-QILEALSYIHSQGIIHRDLKPMNIFIDESRNV 155

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 31  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL 89
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKPEN+L++++G +  A
Sbjct: 90  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 146

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           +P IV    S+    +L+++++++ GG L   +  +    E Q      E + A+  LH 
Sbjct: 77  NPNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALEFLHS 135
Query: 234 CGIVHRDLKPENILMDSDGHV 254
             ++HRD+K +NIL+  DG V
Sbjct: 136 NQVIHRDIKSDNILLGMDGSV 156

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +R+  + +++ ++    E +++ K++HP +VQL      ++ + L+ +F+  G L 
Sbjct: 35  AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 204 FHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            +L  Q G+F  +       ++   +++L +  ++HRDL   N L+  +
Sbjct: 91  DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGEN 139

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 166 RDILTKVTHPFIVQLRYSFQTRSKL------YLILDFINGGHLFFHLYRQGIFREDQARF 219
           R  L +V HP IVQ+ ++F   +        Y++++++ G  L     ++    E  A  
Sbjct: 130 RQFLAEVVHPSIVQI-FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA-- 186
Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILM 248
           Y  EI+ A+S+LH  G+V+ DLKPENI++
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIML 215

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 31  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 89
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKPEN+L++++G +  A
Sbjct: 90  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 146

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSKLYLILDFINGG 200
           + A+K MR+    ++N    M  + D++ K    P+IVQ   +F T + +++ ++ +   
Sbjct: 52  VIAVKQMRRSGNKEENKRILM--DLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTC 109
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
                   QG   E      T  IV A+ +L  K G++HRD+KP NIL+D  G +
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQI 164

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +R+  + +++ ++    E +++ K++HP +VQL      ++ + L+ +F+  G L 
Sbjct: 35  AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 204 FHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            +L  Q G+F  +       ++   +++L +  ++HRDL   N L+  +
Sbjct: 91  DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 139

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDL 241
           +  R  L ++ + ++GG LF  +  +G   F E +A      I  A+ +LH   I HRD+
Sbjct: 128 YAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDV 187
Query: 242 KPENILMDS 250
           KPEN+L  S
Sbjct: 188 KPENLLYTS 196

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +R+  + +++ ++    E +++ K++HP +VQL      ++ + L+ +F+  G L 
Sbjct: 38  AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93
Query: 204 FHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            +L  Q G+F  +       ++   +++L +  ++HRDL   N L+  +
Sbjct: 94  DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 142

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  +S  H   ++HRDLKP+N+L++++G +  A
Sbjct: 89  KKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +R+  + +++ ++    E +++ K++HP +VQL      ++ + L+ +F+  G L 
Sbjct: 33  AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88
Query: 204 FHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            +L  Q G+F  +       ++   +++L +  ++HRDL   N L+  +
Sbjct: 89  DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 137

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL----YLILDFI 197
           A+KV+R D  + ++   Y++  R+      + HP IV +  + +  +      Y++++++
Sbjct: 41  AVKVLRAD--LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +G  L   ++ +G     +A    A+   A++  H+ GI+HRD+KP NI++ +   V
Sbjct: 99  DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV 155

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I++F+  G+L 
Sbjct: 43  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 98
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 99  DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 154

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKPEN+L++++G +  A
Sbjct: 89  KDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLA 145

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL----YLILDFI 197
           A+KV+R D  + ++   Y++  R+      + HP IV +  + +  +      Y++++++
Sbjct: 41  AVKVLRAD--LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +G  L   ++ +G     +A    A+   A++  H+ GI+HRD+KP NI++ +   V
Sbjct: 99  DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV 155

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL----YLILDFI 197
           A+KV+R D  + ++   Y++  R+      + HP IV +  + +  +      Y++++++
Sbjct: 41  AVKVLRAD--LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +G  L   ++ +G     +A    A+   A++  H+ GI+HRD+KP NI++ +   V
Sbjct: 99  DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV 155

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 156 KNHVDYMKAERDI--LTKVT-HPFIVQLRYSFQTRSK--LYLILDFINGGHLFFHLYRQG 210
           +N  D  +  R+I  LT+++ H  IV L    +  +   +YL+ D++        + R  
Sbjct: 47  QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRAN 104
Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           I      ++   +++  + +LH  G++HRD+KP NIL++++ HV  A
Sbjct: 105 ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVA 151

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I++F+  G+L 
Sbjct: 47  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 102
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 103 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLH 232
           P ++ L   ++  S++ LIL++  GG +F     +   +  E+       +I+  V +LH
Sbjct: 89  PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 233 KCGIVHRDLKPENILMDS 250
           +  IVH DLKP+NIL+ S
Sbjct: 149 QNNIVHLDLKPQNILLSS 166

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I++F+  G+L 
Sbjct: 42  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 98  DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I++F+  G+L 
Sbjct: 42  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 98  DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKL------YLILDFINGGHLFFHLYR---QGIFRED 215
           E  I+ K+ HP +V  R       KL       L +++  GG L  +L +       +E 
Sbjct: 63  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
             R   ++I SA+ +LH+  I+HRDLKPENI++
Sbjct: 123 PIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKL------YLILDFINGGHLFFHLYR---QGIFRED 215
           E  I+ K+ HP +V  R       KL       L +++  GG L  +L +       +E 
Sbjct: 62  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
             R   ++I SA+ +LH+  I+HRDLKPENI++
Sbjct: 122 PIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I++F+  G+L 
Sbjct: 40  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 95
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 96  DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +R+  + +++ ++    E +++ K++HP +VQL      ++ + L+ +F+  G L 
Sbjct: 36  AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91
Query: 204 FHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            +L  Q G+F  +       ++   +++L +  ++HRDL   N L+  +
Sbjct: 92  DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 140

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 37  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 95
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 96  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 152

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 37  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 95
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 96  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 152

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 32  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 90
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 91  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 147

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 33  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 91
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 92  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 32  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 90
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 91  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 147

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 34  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 92
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 93  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 149

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 34  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 92
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 93  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 149

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 31  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 89
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 90  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 146

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 89  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 25/159 (15%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE   V+GQGAF                   YA+K +R      +  +  + +E  +L 
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRY-----YAIKKIRH----TEEKLSTILSEVXLLA 57
Query: 171 KVTHPFIVQLRYSF-------------QTRSKLYLILDFINGGHLFFHLYRQGIF--RED 215
            + H ++V+   ++             + +S L++  ++     L+  ++ + +   R++
Sbjct: 58  SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             R +  +I+ A+S++H  GI+HR+LKP NI +D   +V
Sbjct: 118 YWRLFR-QILEALSYIHSQGIIHRNLKPXNIFIDESRNV 155

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 89  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 31  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 89
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 90  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 146

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 89  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL----YLILDFI 197
           A+KV+R D  + ++   Y++  R+      + HP IV +  + +  +      Y++++++
Sbjct: 58  AVKVLRAD--LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 115
Query: 198 NGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +G  L   ++ +G     +A    A+   A++  H+ GI+HRD+KP NI++ +   V
Sbjct: 116 DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV 172

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 31  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 89
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 90  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 146

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 89  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 29  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 88  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 29  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 88  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 29  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 88  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 89  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 89  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 29  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 88  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 108 GPGDFEIFRVV---GQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKA 164
           GPG  E F+ V   G+G +                  + A+K +R DT  +      ++ 
Sbjct: 1   GPGSMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIR- 54
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAE 223
           E  +L ++ HP IV+L     T +KLYL+ + ++     F              + Y  +
Sbjct: 55  EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK----AER 166
           + E+  VVG+GAF                  +   K   KD  IK+   +  +     E 
Sbjct: 10  EIEVEEVVGRGAFGV----------------VCKAKWRAKDVAIKQIESESERKAFIVEL 53
Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ---GIFREDQARFYTAE 223
             L++V HP IV+L  +    + + L++++  GG L+  L+       +    A  +  +
Sbjct: 54  RQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 111
Query: 224 IVSAVSHLHKC---GIVHRDLKPENILMDSDGHVM 255
               V++LH      ++HRDLKP N+L+ + G V+
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 146

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 33  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL 91
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 92  KDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 148

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 30  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 89  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 47  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 103 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ +F++   
Sbjct: 32  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL 90
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 91  KDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 147

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 47  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 103 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 43  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 98
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 99  DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 154

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAER--DILTKVTHPFIVQL-RYSFQTRS---KLYLILDF 196
           YA+K      I+     D  +A+R  D+     HP I++L  Y  + R    + +L+L F
Sbjct: 57  YALK-----RILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF 111
Query: 197 INGGHLFFHLYR---QGIF-REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
              G L+  + R   +G F  EDQ  +    I   +  +H  G  HRDLKP NIL+  +G
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 253 HVMAAHSLNSHNQ 265
             +    L S NQ
Sbjct: 172 QPVLM-DLGSMNQ 183

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 44  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 100 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 111 DFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMK----AER 166
           + E+  VVG+GAF                  +   K   KD  IK+   +  +     E 
Sbjct: 9   EIEVEEVVGRGAFGV----------------VCKAKWRAKDVAIKQIESESERKAFIVEL 52
Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ---GIFREDQARFYTAE 223
             L++V HP IV+L  +    + + L++++  GG L+  L+       +    A  +  +
Sbjct: 53  RQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110
Query: 224 IVSAVSHLHKC---GIVHRDLKPENILMDSDGHVM 255
               V++LH      ++HRDLKP N+L+ + G V+
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           +P IV    S+    +L+++++++ GG L   +  +    E Q      E + A+  LH 
Sbjct: 77  NPNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQALEFLHS 135
Query: 234 CGIVHRDLKPENILMDSDGHV 254
             ++HR++K +NIL+  DG V
Sbjct: 136 NQVIHRNIKSDNILLGMDGSV 156

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 46  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 101
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 102 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 157

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 47  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 103 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 175
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 176 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 206

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++ ++ + + ++    E +++ K++HP +VQL      ++ + L+ +F+  G L 
Sbjct: 55  AIKTIKEGSMSEDDFIE----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 110
Query: 204 FHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            +L  Q G+F  +       ++   +++L +  ++HRDL   N L+  +
Sbjct: 111 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 159

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 47  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 103 DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 42  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 98  DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 42  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 98  DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 108 GPGDFEIF--------RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHV 159
           GPGD  +F        R +G+G F                  + A+K ++ D      H 
Sbjct: 21  GPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMV-AVKALKADA--GPQHR 77
Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQ--TRSKLYLILDFINGGHLFFHLYRQGIFREDQA 217
              K E DIL  + H  I++ +   +    + L L+++++  G L  +L R  I    Q 
Sbjct: 78  SGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLA-QL 136
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
             +  +I   +++LH    +HRDL   N+L+D+D
Sbjct: 137 LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND 170

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 42  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 98  DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 55  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 110
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 111 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 166

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 44  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 100 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 40  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 96  DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 44  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 100 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 40  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 96  DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 42  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HRDL   N L+  +  V  A
Sbjct: 98  DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 190 LYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL 247
           L +I++ + GG LF  +  +G   F E +A     +I +A+  LH   I HRD+KPEN+L
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 248 MDS 250
             S
Sbjct: 161 YTS 163

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           L+ ++IN    F  LY+  I  +   RFY  E++ A+ + H  GI+HRD+KP N+++D
Sbjct: 112 LVFEYINNTD-FKQLYQ--ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 190 LYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL 247
           L +I++ + GG LF  +  +G   F E +A     +I +A+  LH   I HRD+KPEN+L
Sbjct: 82  LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 248 MDS 250
             S
Sbjct: 142 YTS 144

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 144

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 144

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 144

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 288 AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HR+L   N L+  +  V  A
Sbjct: 344 DYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 399

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 91  LEHENDAELEAESERKIGPGDFEIFRVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRK 150
           +E E  A  E E  +K     +     +G GAF                      + + +
Sbjct: 10  VELEGLAACEGEYSQK-----YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE 64
Query: 151 DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQ 209
           D  I+   +  +  E  IL++V H  I+++   F+ +    L+++    G  LF  + R 
Sbjct: 65  DCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH 124
Query: 210 GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
               E  A +   ++VSAV +L    I+HRD+K ENI++  D
Sbjct: 125 PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED 166

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAE 223
           E  +L ++ HP IV+L     T +KLYL+ +F++     F              + Y  +
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 145

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAE 223
           E  +L ++ HP IV+L     T +KLYL+ +F++     F              + Y  +
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           L+ ++IN    F  LY+  I  +   RFY  E++ A+ + H  GI+HRD+KP N+++D
Sbjct: 117 LVFEYINNTD-FKQLYQ--ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y+I +F+  G+L 
Sbjct: 249 AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L R+   +E  A    +   +I SA+ +L K   +HR+L   N L+  +  V  A
Sbjct: 305 DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 360

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 57  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 116
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 117 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 147

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 81  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 140
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 141 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 171

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 144

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 54  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 144

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  IL ++ H  IV+L     T+ +L L+ + ++          +G      A+ +  ++
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++ +++ H   ++HRDLKP+N+L++ +G +  A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  IL ++ H  IV+L     T+ +L L+ + ++          +G      A+ +  ++
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++ +++ H   ++HRDLKP+N+L++ +G +  A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  IL ++ H  IV+L     T+ +L L+ + ++          +G      A+ +  ++
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++ +++ H   ++HRDLKP+N+L++ +G +  A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+L+D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVLID 165

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  +L +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  +
Sbjct: 73  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 132
Query: 225 VSAVSHL-HKCGIVHRDLKPENILMDSDGHV 254
           +  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 133 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI 163

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-RQGIFREDQAR--FYTAEIVSAV 228
           + H  IVQ   SF     + + ++ + GG L   L  + G  ++++    FYT +I+  +
Sbjct: 76  LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVM 255
            +LH   IVHRD+K +N+L+++   V+
Sbjct: 136 KYLHDNQIVHRDIKGDNVLINTYSGVL 162

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG- 200
           + A+K +R DT  +      ++ E  +L ++ HP IV+L     T +KLYL+ + ++   
Sbjct: 29  VVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDL 87
Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             F              + Y  +++  ++  H   ++HRDLKP+N+L++++G +  A
Sbjct: 88  KTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 144

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQL---RYSFQTRSKLYLILDFIN 198
           ++A+KV    + ++   VD    E ++L K+ H  IV+L        TR K+ LI++F  
Sbjct: 36  LFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV-LIMEFCP 92
Query: 199 GGHLFFHLYR-QGIFREDQARFYTA--EIVSAVSHLHKCGIVHRDLKPENIL--MDSDGH 253
            G L+  L      +   ++ F     ++V  ++HL + GIVHR++KP NI+  +  DG 
Sbjct: 93  CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVSAVSHLH 232
           HP  V+L  +++    LYL  +   G  L  H    G    E Q   Y  + + A++HLH
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 233 KCGIVHRDLKPENILMDSDGHV 254
             G+VH D+KP NI +   G  
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRC 196

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y++ +++N G L  F         R  Q    +A
Sbjct: 60  EAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGEN 147

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y++ +++N G L  F         R  Q    +A
Sbjct: 60  EAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGEN 147

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 151 DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF-FHLYRQ 209
           D ++KK  +  +K    +L ++ H  +V L    + + + YL+ +F++   L    L+  
Sbjct: 64  DKMVKKIAMREIK----LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN 119
Query: 210 GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           G+  +   + Y  +I++ +   H   I+HRD+KPENIL+   G V
Sbjct: 120 GLDYQVVQK-YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVV 163

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQL---RYSFQTRSKLYLILDFIN 198
           ++A+KV    + ++   VD    E ++L K+ H  IV+L        TR K+ LI++F  
Sbjct: 36  LFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV-LIMEFCP 92
Query: 199 GGHLFFHLYR-QGIFREDQARFYTA--EIVSAVSHLHKCGIVHRDLKPENIL--MDSDGH 253
            G L+  L      +   ++ F     ++V  ++HL + GIVHR++KP NI+  +  DG 
Sbjct: 93  CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 139 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 170

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 133 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 164

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 133 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 164

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-RQGIFREDQAR--FYTAEIVSAV 228
           + H  IVQ   SF     + + ++ + GG L   L  + G  ++++    FYT +I+  +
Sbjct: 62  LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVM 255
            +LH   IVHRD+K +N+L+++   V+
Sbjct: 122 KYLHDNQIVHRDIKGDNVLINTYSGVL 148

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 132 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 163

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RFY  EI+ A+ + H  GI+HRD+KP N+++D
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 143 YAMKVMRKDTIIKKNHVDYMKAERDILTKV-----THPFIVQLRYSFQTRSKLYLILDFI 197
           YA+KV+R    IKK +    K E DIL K+      +  IV+    F     + LI + +
Sbjct: 63  YAVKVVRN---IKK-YTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118
Query: 198 NGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
            G  L+  + R     F  +  + Y  EI+ A+++L K  + H DLKPENIL+D
Sbjct: 119 -GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLD 171

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 47  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 107 VMELMDAN---LXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 47  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 107 VMELMDAN---LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFY 220
           +K E  IL    H  I+ L  SF++  +L +I +FI+G  +F  +        E +   Y
Sbjct: 48  VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSY 107
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
             ++  A+  LH   I H D++PENI+  +
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQT 137

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 85  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 145 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 164 AERDILTKVTHPFIVQL-RYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFY 220
           AE  ++T++ H  +VQL     + +  LY++ +++  G L  +L  +G  +   D    +
Sbjct: 54  AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 113
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           + ++  A+ +L     VHRDL   N+L+  D
Sbjct: 114 SLDVCEAMEYLEGNNFVHRDLAARNVLVSED 144

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN 264
           +I S V+HLH   I+HRDLKP+NIL+ +     A     + N
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 182

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF--QTRSKLYLILDFINGGH 201
           A+K ++ D      H    K E DIL  + H  I++ +     Q    L L+++++  G 
Sbjct: 47  AVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           L  +L R  I    Q   +  +I   +++LH    +HR+L   N+L+D+D
Sbjct: 105 LRDYLPRHSIGLA-QLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDND 153

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL 247
           +  YL++ F+  G     L +     ED+ +F   +++  + ++H  GI+HRDLKP N+ 
Sbjct: 103 TDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA 160
Query: 248 MDSD 251
           ++ D
Sbjct: 161 VNED 164

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN 264
           +I S V+HLH   I+HRDLKP+NIL+ +     A     + N
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 182

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 48/162 (29%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTI-IKKNHVD--YMKAERDILTKV 172
           +V+G G+F                  ++  K++  D + IKK   D  +   E  I+  V
Sbjct: 46  KVIGNGSFGV----------------VFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIV 89
Query: 173 THPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQ---------- 216
            HP +V L+  F +         L L+L+++           + ++R  +          
Sbjct: 90  KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP----------ETVYRASRHYAKLKQTMP 139
Query: 217 ---ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
               + Y  +++ +++++H  GI HRD+KP+N+L+D    V+
Sbjct: 140 MLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVL 181

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF--QTRSKLYLILDFINGGH 201
           A+K ++ D      H    K E DIL  + H  I++ +     Q    L L+++++  G 
Sbjct: 47  AVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           L  +L R  I    Q   +  +I   +++LH    +HR+L   N+L+D+D
Sbjct: 105 LRDYLPRHSIGLA-QLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDND 153

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 47  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 107 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 85  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 145 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 164 AERDILTKVTHPFIVQL-RYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFY 220
           AE  ++T++ H  +VQL     + +  LY++ +++  G L  +L  +G  +   D    +
Sbjct: 63  AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 122
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           + ++  A+ +L     VHRDL   N+L+  D
Sbjct: 123 SLDVCEAMEYLEGNNFVHRDLAARNVLVSED 153

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 156 KNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL------YLILDFINGGHLFFHLYRQ 209
           + H      E  +L  V H  I+ L   F  +  L      YL+++ ++          Q
Sbjct: 62  QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC------Q 115
Query: 210 GIFRE---DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            I  E   ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 116 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 160

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 164 AERDILTKVTHPFIVQL-RYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFY 220
           AE  ++T++ H  +VQL     + +  LY++ +++  G L  +L  +G  +   D    +
Sbjct: 48  AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 107
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           + ++  A+ +L     VHRDL   N+L+  D
Sbjct: 108 SLDVCEAMEYLEGNNFVHRDLAARNVLVSED 138

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN 264
           +I S V+HLH   I+HRDLKP+NIL+ +     A     + N
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 156 KNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL------YLILDFINGGHLFFHLYRQ 209
           + H      E  +L  V H  I+ L   F  +  L      YL+++ ++          Q
Sbjct: 64  QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC------Q 117
Query: 210 GIFRE---DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            I  E   ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 118 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 47  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 107 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN 264
           +I S V+HLH   I+HRDLKP+NIL+ +     A     + N
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 48  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 107
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 108 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 164 AERDILTKVTHPFIVQL-RYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFY 220
           AE  ++T++ H  +VQL     + +  LY++ +++  G L  +L  +G  +   D    +
Sbjct: 235 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 294
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           + ++  A+ +L     VHRDL   N+L+  D
Sbjct: 295 SLDVCEAMEYLEGNNFVHRDLAARNVLVSED 325

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 46  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 105
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 106 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 161

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 47  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 107 VMELMDAN---LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 40  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 99
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 100 VMELMDAN---LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 155

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 40  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 99
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 100 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 155

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 41  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 100
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 101 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 156

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 47  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 107 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 48  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 107
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 108 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 147 VMRKDTIIKK------NHVDYMKAERDI--LTKVTHPFIVQLRYSFQTRSKL------YL 192
           V+ ++  IKK      N     +A R++  +  V H  I+ L   F  +  L      YL
Sbjct: 41  VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 100
Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +++ ++          Q     ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 101 VMELMDAN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 156

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 116 RVVGQGAFXXXXXXXXXXXXXXXXXXIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           +V+G GAF                  + A+KV+R++T  K N    +  E  ++  V  P
Sbjct: 23  KVLGSGAFGTVYKGIWIPDGENVKIPV-AIKVLRENTSPKANK--EILDEAYVMAGVGSP 79
Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF-------YTAEIVSAV 228
           ++ +L       S + L+   +  G L  H+      RE++ R        +  +I   +
Sbjct: 80  YVSRL-LGICLTSTVQLVTQLMPYGCLLDHV------RENRGRLGSQDLLNWCMQIAKGM 132
Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
           S+L    +VHRDL   N+L+ S  HV
Sbjct: 133 SYLEDVRLVHRDLAARNVLVKSPNHV 158

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 165 ERDILTKVTHPFIVQLR-YSFQT-RSKLYLILDFINGGHLFFHLYRQGIFREDQARF--Y 220
           E  IL  +   FIV+ R  S+   R +L L+++++  G L   L R    R D +R   Y
Sbjct: 58  EIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLY 116
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +++I   + +L     VHRDL   NIL++S+ HV  A
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 153

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           A+K +++DT+     V+    E  ++ ++ HP +VQL          Y++ +++  G+L 
Sbjct: 61  AVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLL 116
Query: 204 FHLYRQGIFREDQA---RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            +L R+    E  A    +   +I SA+ +L K   +HRDL   N L+  + HV+
Sbjct: 117 DYL-RECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV-GENHVV 169

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y+++++++ G L  F         R  Q     A
Sbjct: 63  EAQVMKKLRHEKLVQL-YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGEN 150

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y+++++++ G L  F         R  Q     A
Sbjct: 63  EAQVMKKLRHEKLVQL-YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGEN 150

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFYTAE 223
           E  I+ +   P +V+   S+   + L++++++   G +   +  R     ED+       
Sbjct: 74  EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +  + +LH    +HRD+K  NIL++++GH   A
Sbjct: 134 TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLA 167

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y+++++++ G L  F         R  Q     A
Sbjct: 63  EAQVMKKLRHEKLVQL-YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGEN 150

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 165 ERDILTKVTHPFIVQLR-YSFQ-TRSKLYLILDFINGGHLFFHLYRQGIFREDQARF--Y 220
           E  IL  +   FIV+ R  S+   R  L L+++++  G L   L R    R D +R   Y
Sbjct: 61  EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLY 119
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +++I   + +L     VHRDL   NIL++S+ HV  A
Sbjct: 120 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 156

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 144 AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL- 202
           A+K ++  T+  +  +     E  ++ K+ H  +VQL Y+  +   +Y++ ++++ G L 
Sbjct: 295 AIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLL 349
Query: 203 -FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            F         R  Q     A+I S ++++ +   VHRDL+  NIL+  +
Sbjct: 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 399

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           +++  + HLH  GI+HRDLKP NI++ SD 
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDA 163

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 165 ERDILTKVTHPFIVQLR-YSFQ-TRSKLYLILDFINGGHLFFHLYRQGIFREDQARF--Y 220
           E  IL  +   FIV+ R  S+   R  L L+++++  G L   L R    R D +R   Y
Sbjct: 62  EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLY 120
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +++I   + +L     VHRDL   NIL++S+ HV  A
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 157

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD 
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDA 163

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 165 ERDILTKVTHPFIVQLR-YSFQ-TRSKLYLILDFINGGHLFFHLYRQGIFREDQARF--Y 220
           E  IL  +   FIV+ R  S+   R  L L+++++  G L   L R    R D +R   Y
Sbjct: 74  EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLY 132
Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +++I   + +L     VHRDL   NIL++S+ HV  A
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 169

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           +++  + HLH  GI+HRDLKP NI++ SD 
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y++ ++++ G L  F         R  Q     A
Sbjct: 63  EAQVMKKIRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGEN 150

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A++ +R+  I+K     + K E  I       F +Q   SF+  +++Y+I + +    
Sbjct: 51  LFALRTLREIKILK-----HFKHENIITI-----FNIQRPDSFENFNEVYIIQELMQTD- 99
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
               +    +  +D  +++  + + AV  LH   ++HRDLKP N+L++S+
Sbjct: 100 -LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN 148

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           +++  + HLH  GI+HRDLKP NI++ SD 
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A++ +R+  I+K     + K E  I       F +Q   SF+  +++Y+I + +    
Sbjct: 51  LFALRTLREIKILK-----HFKHENIITI-----FNIQRPDSFENFNEVYIIQELMQTD- 99
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
               +    +  +D  +++  + + AV  LH   ++HRDLKP N+L++S+
Sbjct: 100 -LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN 148

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           ++A++ +R+  I+K     + K E  I       F +Q   SF+  +++Y+I + +    
Sbjct: 51  LFALRTLREIKILK-----HFKHENIITI-----FNIQRPDSFENFNEVYIIQELMQTD- 99
Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
               +    +  +D  +++  + + AV  LH   ++HRDLKP N+L++S+
Sbjct: 100 -LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN 148

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           +++  + HLH  GI+HRDLKP NI++ SD 
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 128 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 164

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 131 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 167

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y++ ++++ G L  F         R  Q     A
Sbjct: 63  EAQVMKKLRHEKLVQL-YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGEN 150

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 156

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH---LFFHLYRQGIFRED 215
           V +++ E  +     HP IV  R +F   ++L+++  F+  G    L    +  G+  E 
Sbjct: 54  VTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM-NEL 112
Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              +    ++ A+ ++H  G VHR +K  +IL+  DG V
Sbjct: 113 AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV 151

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH---LFFHLYRQGIFRED 215
           V +++ E  +     HP IV  R +F   ++L+++  F+  G    L    +  G+  E 
Sbjct: 70  VTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM-NEL 128
Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              +    ++ A+ ++H  G VHR +K  +IL+  DG V
Sbjct: 129 AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV 167

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++  +   +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 205 HLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           ++  QG   E+ AR +  +++  + ++H   ++HRDLKP N+ ++++  V+
Sbjct: 110 NVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVL 160

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++  P +V +    +   +LY+    ING  L   L RQG     +A     +I SA+  
Sbjct: 90  RLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDA 149
Query: 231 LHKCGIVHRDLKPENILMDSD 251
            H  G  HRD+KPENIL+ +D
Sbjct: 150 AHAAGATHRDVKPENILVSAD 170

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y++ ++++ G L  F         R  Q     A
Sbjct: 229 EAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGEN 316

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y++ ++++ G L  F         R  Q     A
Sbjct: 56  EAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 114
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGEN 143

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y++ ++++ G L  F         R  Q     A
Sbjct: 229 EAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGEN 316

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
           E  ++ K+ H  +VQL Y+  +   +Y++ ++++ G L  F         R  Q     A
Sbjct: 63  EAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           +I S ++++ +   VHRDL+  NIL+  +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGEN 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	8e-88
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-87
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-85
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-85
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-85
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-85
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	9e-85
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-84
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	7e-84
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-83
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	8e-83
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-82
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	5e-81
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-81
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-79
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-79
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-78
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-77
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-77
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-77
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-76
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-74
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-59
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-57
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-49
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-46
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-44
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-44
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-44
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-43
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-42
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-40
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-39
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-39
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	7e-38
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-37
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-37
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-37
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-37
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-37
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-37
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-37
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-37
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-37
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-36
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-36
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-36
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-36
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-36
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-36
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-36
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-36
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-36
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-36
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-36
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-35
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-35
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-35
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-35
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	7e-35
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-35
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-35
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	9e-35
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-34
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-34
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-34
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-34
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-34
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-34
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-34
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-34
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-34
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	5e-34
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-34
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-34
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	7e-34
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	7e-34
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	7e-34
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-34
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-34
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-33
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-33
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-33
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-33
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-32
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-32
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-32
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-31
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-30
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-29
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-29
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-29
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-28
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-27
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-27
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-27
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-27
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-26
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-26
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-25
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-24
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-24
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-24
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-24
3aln_A	327	Dual specificity mitogen-activated protein kinase;	8e-23
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-22
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-22
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-22
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-22
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-21
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-21
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-21
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-21
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-21
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-21
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-20
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-20
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-20
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-20
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-19
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-19
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-19
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-19
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	9e-19
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-18
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-18
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-18
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-18
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-18
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-18
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-18
3niz_A	311	Rhodanese family protein; structural genomics, str	7e-18
3o0g_A	292	Cell division protein kinase 5; kinase activator c	8e-18
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-17
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-17
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-17
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-17
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-17
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-17
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	9e-17
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-16
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-16
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	9e-16
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-15
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-15
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-15
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-15
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-14
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-14
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-14
3uqc_A	286	Probable conserved transmembrane protein; structur	7e-14
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-14
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-13
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-13
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-13
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-13
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-13
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-13
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-12
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-12
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-12
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-12
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	4e-12
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-12
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-12
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-11
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-11
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-11
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-11
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	8e-11
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-10
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-10
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-10
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-10
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-10
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-10
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-10
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	9e-10
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-09
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-09
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-09
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-09
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-09
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-09
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-09
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	5e-09
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	7e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-08
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-08
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-08
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-08
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-08
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-08
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	4e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	5e-08
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-08
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-07
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-07
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  263 bits (675), Expect = 8e-88
 Identities = 80/166 (48%), Positives = 109/166 (65%), Gaps = 3/166 (1%)

Query: 90  ELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR 149
            ++         E   K  P  FE+ +V+GQG+FGKVF VKK      D+  +YAMKV++
Sbjct: 4   SIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKIS--GSDARQLYAMKVLK 61

Query: 150 KDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ 209
           K T+  ++ V   K ERDIL +V HPFIV+L Y+FQT  KLYLILDF+ GG LF  L ++
Sbjct: 62  KATLKVRDRVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE 120

Query: 210 GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            +F E+  +FY AE+  A+ HLH  GI++RDLKPENIL+D +GH+ 
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIK 166

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  262 bits (673), Expect = 2e-87
 Identities = 80/155 (51%), Positives = 108/155 (69%), Gaps = 3/155 (1%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK-NHVD 160
               KI P  FE+ RV+G+G +GKVFQV+K      ++  I+AMKV++K  I++      
Sbjct: 9   RGPEKIRPECFELLRVLGKGGYGKVFQVRKVT--GANTGKIFAMKVLKKAMIVRNAKDTA 66

Query: 161 YMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
           + KAER+IL +V HPFIV L Y+FQT  KLYLIL++++GG LF  L R+GIF ED A FY
Sbjct: 67  HTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY 126

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            AEI  A+ HLH+ GI++RDLKPENI+++  GHV 
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVK 161

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  259 bits (663), Expect = 1e-85
 Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 4/171 (2%)

Query: 87  QIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMK 146
           Q+  ++HE           K+G  +FE+ +V+G GA+GKVF V+K      D+  +YAMK
Sbjct: 31  QLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKIS--GHDTGKLYAMK 88

Query: 147 VMRKDTII-KKNHVDYMKAERDILTKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLFF 204
           V++K TI+ K    ++ + ER +L  +   PF+V L Y+FQT +KL+LILD+INGG LF 
Sbjct: 89  VLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT 148

Query: 205 HLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           HL ++  F E + + Y  EIV A+ HLHK GI++RD+K ENIL+DS+GHV+
Sbjct: 149 HLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV 199

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  257 bits (658), Expect = 2e-85
 Identities = 58/150 (38%), Positives = 96/150 (64%), Gaps = 5/150 (3%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           K    DF+I R +G G+FG+V  ++ +      +   YAMKV++K+ +++   V++   E
Sbjct: 2   KYSLQDFQILRTLGTGSFGRVHLIRSR-----HNGRYYAMKVLKKEIVVRLKQVEHTNDE 56

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
           R +L+ VTHPFI+++  +FQ   ++++I+D+I GG LF  L +   F    A+FY AE+ 
Sbjct: 57  RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            A+ +LH   I++RDLKPENIL+D +GH+ 
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIK 146

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  258 bits (662), Expect = 3e-85
 Identities = 79/184 (42%), Positives = 107/184 (58%), Gaps = 6/184 (3%)

Query: 73  GPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKK 132
           G S                       L   S     P DF   +V+G+G+FGKV   + K
Sbjct: 1   GISQPQEPELMNANPAPPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHK 60

Query: 133 GVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLY 191
                  +  YA+KV++K  I+KK    ++ +ER++L K V HPF+V L +SFQT  KLY
Sbjct: 61  -----AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115

Query: 192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
            +LD+INGG LF+HL R+  F E +ARFY AEI SA+ +LH   IV+RDLKPENIL+DS 
Sbjct: 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ 175

Query: 252 GHVM 255
           GH++
Sbjct: 176 GHIV 179

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  258 bits (660), Expect = 8e-85
 Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 5/154 (3%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
           +    +    FEI R +G+G+FGKV  V+K      D+  +YAMK M K   +++N V  
Sbjct: 7   DENEDVNFDHFEILRAIGKGSFGKVCIVQKN-----DTKKMYAMKYMNKQKCVERNEVRN 61

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           +  E  I+  + HPF+V L YSFQ    +++++D + GG L +HL +   F+E+  + + 
Sbjct: 62  VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI 121

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            E+V A+ +L    I+HRD+KP+NIL+D  GHV 
Sbjct: 122 CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVH 155

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  255 bits (654), Expect = 9e-85
 Identities = 64/153 (41%), Positives = 96/153 (62%), Gaps = 5/153 (3%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
             RK  P DF+  +++G+G+F  V   ++       +   YA+K++ K  IIK+N V Y+
Sbjct: 23  QPRKKRPEDFKFGKILGEGSFSTVVLAREL-----ATSREYAIKILEKRHIIKENKVPYV 77

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
             ERD+++++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTA
Sbjct: 78  TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           EIVSA+ +LH  GI+HRDLKPENIL++ D H+ 
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQ 170

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  254 bits (651), Expect = 5e-84
 Identities = 65/150 (43%), Positives = 101/150 (67%), Gaps = 5/150 (3%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G FGKV  V++K      +   YAMK++RK+ II K+ V +   E
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTE 55

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 56  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           SA+ +LH   +V+RD+K EN+++D DGH+ 
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIK 145

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  256 bits (655), Expect = 7e-84
 Identities = 66/193 (34%), Positives = 120/193 (62%), Gaps = 7/193 (3%)

Query: 65  HNRSHSFVGPSP-RYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAF 123
           H+  H +  P+        ++   I+E +   +     ++   +G  DF++ RV+G+G++
Sbjct: 6   HHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSY 65

Query: 124 GKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRY 182
            KV  V+ K      +D IYAM+V++K+ +     +D+++ E+ +  + + HPF+V L  
Sbjct: 66  AKVLLVRLK-----KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 120

Query: 183 SFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLK 242
            FQT S+L+ +++++NGG L FH+ RQ    E+ ARFY+AEI  A+++LH+ GI++RDLK
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 180

Query: 243 PENILMDSDGHVM 255
            +N+L+DS+GH+ 
Sbjct: 181 LDNVLLDSEGHIK 193

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  251 bits (644), Expect = 8e-83
 Identities = 62/154 (40%), Positives = 106/154 (68%), Gaps = 6/154 (3%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
           +   +G  DF++ RV+G+G++ KV  V+ K      +D IYAMKV++K+ +     +D++
Sbjct: 2   AMDPLGLQDFDLLRVIGRGSYAKVLLVRLK-----KTDRIYAMKVVKKELVNDDEDIDWV 56

Query: 163 KAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
           + E+ +  + + HPF+V L   FQT S+L+ +++++NGG L FH+ RQ    E+ ARFY+
Sbjct: 57  QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 116

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           AEI  A+++LH+ GI++RDLK +N+L+DS+GH+ 
Sbjct: 117 AEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK 150

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  251 bits (644), Expect = 8e-83
 Identities = 64/165 (38%), Positives = 103/165 (62%), Gaps = 6/165 (3%)

Query: 92  EHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD 151
             +    +   S  ++G  +FE  RV+G+G+FGKV   + K     ++  +YA+KV++KD
Sbjct: 5   SSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVK-----ETGDLYAVKVLKKD 59

Query: 152 TIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG 210
            I++ + V+    E+ IL+    HPF+ QL   FQT  +L+ +++F+NGG L FH+ +  
Sbjct: 60  VILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR 119

Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            F E +ARFY AEI+SA+  LH  GI++RDLK +N+L+D +GH  
Sbjct: 120 RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCK 164

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  250 bits (642), Expect = 2e-82
 Identities = 55/154 (35%), Positives = 95/154 (61%), Gaps = 6/154 (3%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
           +  ++   DF    V+G+G+FGKV   ++K      +D +YA+K+++KD +I+ + V+  
Sbjct: 13  NRDRMKLTDFNFLMVLGKGSFGKVMLSERK-----GTDELYAVKILKKDVVIQDDDVECT 67

Query: 163 KAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
             E+ +L      PF+ QL   FQT  +LY +++++NGG L +H+ + G F+E  A FY 
Sbjct: 68  MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYA 127

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           AEI   +  L   GI++RDLK +N+++DS+GH+ 
Sbjct: 128 AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIK 161

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  247 bits (632), Expect = 5e-81
 Identities = 60/184 (32%), Positives = 104/184 (56%), Gaps = 5/184 (2%)

Query: 72  VGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKK 131
              + + +   S+   + + + +   + E  S+       F+  + +G G+FG+V  VK 
Sbjct: 3   AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62

Query: 132 KGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY 191
           K     +S   YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY
Sbjct: 63  K-----ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117

Query: 192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++++++ GG +F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177

Query: 252 GHVM 255
           G++ 
Sbjct: 178 GYIQ 181

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  249 bits (637), Expect = 6e-81
 Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 6/154 (3%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
            E ++   DFEI +V+G+GAF +V  VK K      +  +YAMK+M K  ++K+  V   
Sbjct: 54  KEVRLQRDDFEILKVIGRGAFSEVAVVKMK-----QTGQVYAMKIMNKWDMLKRGEVSCF 108

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYT 221
           + ERD+L      +I QL ++FQ  + LYL++++  GG L   L + G     + ARFY 
Sbjct: 109 REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYL 168

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           AEIV A+  +H+ G VHRD+KP+NIL+D  GH+ 
Sbjct: 169 AEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIR 202

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  246 bits (630), Expect = 1e-79
 Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 6/154 (3%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
            + ++   DFEI +V+G+GAFG+V  VK K     ++D ++AMK++ K  ++K+      
Sbjct: 67  KQMRLHREDFEILKVIGRGAFGEVAVVKLK-----NADKVFAMKILNKWEMLKRAETACF 121

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYT 221
           + ERD+L      +I  L Y+FQ  + LYL++D+  GG L   L + +    E+ ARFY 
Sbjct: 122 REERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL 181

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           AE+V A+  +H+   VHRD+KP+NILMD +GH+ 
Sbjct: 182 AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIR 215

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  246 bits (629), Expect = 2e-79
 Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 6/170 (3%)

Query: 89  QELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVM 148
                E      A+ + ++   +FE  +++G+G FGKV  VK+K      +   YAMK++
Sbjct: 127 DNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEK-----ATGRYYAMKIL 181

Query: 149 RKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR 208
           +K+ I+ K+ V +   E  +L    HPF+  L+YSFQT  +L  ++++ NGG LFFHL R
Sbjct: 182 KKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 241

Query: 209 QGIFREDQARFYTAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHVMAA 257
           + +F ED+ARFY AEIVSA+ +LH +  +V+RDLK EN+++D DGH+   
Sbjct: 242 ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKIT 291

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  243 bits (621), Expect = 1e-78
 Identities = 56/153 (36%), Positives = 94/153 (61%), Gaps = 6/153 (3%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
            + ++   D+E+ +V+G+GAFG+V  V+ K      +  +YAMK++ K  +IK++   + 
Sbjct: 62  RDLRMKAEDYEVVKVIGRGAFGEVQLVRHK-----STRKVYAMKLLSKFEMIKRSDSAFF 116

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
             ERDI+     P++VQL Y+FQ    LY++++++ GG L   +       E  ARFYTA
Sbjct: 117 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTA 175

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           E+V A+  +H  G +HRD+KP+N+L+D  GH+ 
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 208

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  237 bits (608), Expect = 2e-77
 Identities = 53/153 (34%), Positives = 94/153 (61%), Gaps = 6/153 (3%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
            + K+   DF + +++G+G+FGKVF  + K      ++  +A+K ++KD ++  + V+  
Sbjct: 10  LQIKLKIEDFILHKMLGKGSFGKVFLAEFK-----KTNQFFAIKALKKDVVLMDDDVECT 64

Query: 163 KAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
             E+ +L+    HPF+  +  +FQT+  L+ +++++NGG L +H+     F   +A FY 
Sbjct: 65  MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           AEI+  +  LH  GIV+RDLK +NIL+D DGH+
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHI 157

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  243 bits (622), Expect = 3e-77
 Identities = 62/155 (40%), Positives = 94/155 (60%), Gaps = 9/155 (5%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA 164
           + +G   F  FRV+G+G FG+VF  + K      +  +YA K + K  + K+        
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMV 234

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY----RQGIFREDQARFY 220
           E+ IL KV   FIV L Y+F+T++ L L++  +NGG + +H+Y        F+E +A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           TA+IVS + HLH+  I++RDLKPEN+L+D DG+V 
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVR 329

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  245 bits (628), Expect = 7e-77
 Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 8/157 (5%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
           E    +   DF + R++G+G FG+V+  +K      D+  +YAMK + K  I  K     
Sbjct: 181 ELNIHLTMNDFSVHRIIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETL 235

Query: 162 MKAERDILTKV---THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
              ER +L+ V     PFIV + Y+F T  KL  ILD +NGG L +HL + G+F E   R
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR 295

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           FY AEI+  + H+H   +V+RDLKP NIL+D  GHV 
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 332

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  242 bits (618), Expect = 2e-76
 Identities = 73/243 (30%), Positives = 108/243 (44%), Gaps = 18/243 (7%)

Query: 15  TKLKKLTITPPSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFVGP 74
              + LT    S + PD         +T C    +            ++ H   +  V P
Sbjct: 100 ACGRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHE--YLSVAP 157

Query: 75  SPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGV 134
              Y  S      +Q    E          + +    F  +RV+G+G FG+V   + +  
Sbjct: 158 FADYLDSIYFNRFLQWKWLER---------QPVTKNTFRQYRVLGKGGFGEVCACQVR-- 206

Query: 135 DDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLIL 194
               +  +YA K + K  I K+        E+ IL KV   F+V L Y+++T+  L L+L
Sbjct: 207 ---ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263

Query: 195 DFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
             +NGG L FH+Y  G   F E +A FY AEI   +  LH+  IV+RDLKPENIL+D  G
Sbjct: 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG 323

Query: 253 HVM 255
           H+ 
Sbjct: 324 HIR 326

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  239 bits (611), Expect = 2e-74
 Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 7/231 (3%)

Query: 29  SPDFDFTEVFGPLTPCRHNNQSPASTSA-SLGDPQVIHNRSHSFVGPSPRYALSSSLPLQ 87
           S  F  +E+            S       ++  P      +        R  +       
Sbjct: 259 SLSFGISELQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAP 318

Query: 88  IQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKV 147
            ++  +         +  ++   DF    V+G+G+FGKV   ++K      +D +YA+K+
Sbjct: 319 EEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERK-----GTDELYAVKI 373

Query: 148 MRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL 206
           ++KD +I+ + V+    E+ +L      PF+ QL   FQT  +LY +++++NGG L +H+
Sbjct: 374 LKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI 433

Query: 207 YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            + G F+E  A FY AEI   +  L   GI++RDLK +N+++DS+GH+  A
Sbjct: 434 QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIA 484

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  190 bits (484), Expect = 1e-59
 Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 5/159 (3%)

Query: 99  LEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH 158
           L    +RK    DF+I R +G+G FG V+  ++K      +  I A+KV+ K  + K+  
Sbjct: 3   LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREK-----QNKFIMALKVLFKSQLEKEGV 57

Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
              ++ E +I + + HP I+++   F  R ++YL+L+F   G L+  L + G F E ++ 
Sbjct: 58  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +  E+  A+ + H+  ++HRD+KPEN+LM   G +  A
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIA 156

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  184 bits (469), Expect = 2e-57
 Identities = 49/151 (32%), Positives = 85/151 (56%), Gaps = 5/151 (3%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK 163
           +R+    DFEI R +G+G FG V+  ++K      S  I A+KV+ K  + K      ++
Sbjct: 3   KRQWALEDFEIGRPLGKGKFGNVYLAREK-----QSKFILALKVLFKAQLEKAGVEHQLR 57

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
            E +I + + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           + +A+S+ H   ++HRD+KPEN+L+ S G +
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGEL 148

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  164 bits (417), Expect = 3e-49
 Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 19/211 (9%)

Query: 46  HNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESER 105
           H++   +       +         S     PR      +  + +  E       +     
Sbjct: 3   HHHHHSSGVDLGTENLYF-----QSMHQLQPR-----RVSFRGEASETLQSPGYDPSRPE 52

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
                 F+    +G G++G+VF+V+ K  +DG    +YA+K         K+    +  E
Sbjct: 53  SFFQQSFQRLSRLGHGSYGEVFKVRSK--EDGR---LYAVKRSMSPFRGPKDRARKLA-E 106

Query: 166 RDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAE 223
                KV  HP  V+L  +++    LYL  +   G  L  H    G    E Q   Y  +
Sbjct: 107 VGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLRD 165

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            + A++HLH  G+VH D+KP NI +   G  
Sbjct: 166 TLLALAHLHSQGLVHLDVKPANIFLGPRGRC 196

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  158 bits (402), Expect = 1e-46
 Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 30/176 (17%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK----- 156
             E+     D+ I R + QG F K+   +K           YA+K   K  + KK     
Sbjct: 23  VKEKDKYINDYRIIRTLNQGKFNKIILCEKDN-------KFYALKKYEKSLLEKKRDFTK 75

Query: 157 ---------NHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
                    +  D  K E  I+T + + + +          ++Y+I +++    +     
Sbjct: 76  SNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDE 135

Query: 208 RQGI--------FREDQARFYTAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
              +              +     ++++ S++H +  I HRD+KP NILMD +G V
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRV 191

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  153 bits (389), Expect = 1e-44
 Identities = 23/172 (13%), Positives = 68/172 (39%), Gaps = 8/172 (4%)

Query: 98  ELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN 157
            ++ ++E ++G     +  ++G+GAF +V++  +  ++D  +   + +KV +     +  
Sbjct: 53  AIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFY 112

Query: 158 HVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-----YRQGIF 212
                    + L        ++   +   ++   L+ +  + G L   +       + + 
Sbjct: 113 I---GTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVM 169

Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN 264
            +     +   ++  +  +H C I+H D+KP+N ++ +           S  
Sbjct: 170 PQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAG 221

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  152 bits (387), Expect = 1e-44
 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 8/185 (4%)

Query: 73  GPSPRYALSSSLPLQIQELEHENDAELEAESERKIGP---GDFEIFRVVGQGAFGKVFQV 129
           GP+P     + +P              +   E  + P     +   R +G+G F K F++
Sbjct: 1   GPAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEI 60

Query: 130 KKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK 189
                 D D+  ++A K++ K  ++K +  + M  E  I   + H  +V     F+    
Sbjct: 61  S-----DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF 115

Query: 190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           ++++L+      L     R+    E +AR+Y  +IV    +LH+  ++HRDLK  N+ ++
Sbjct: 116 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 175

Query: 250 SDGHV 254
            D  V
Sbjct: 176 EDLEV 180

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  149 bits (378), Expect = 8e-44
 Identities = 41/164 (25%), Positives = 85/164 (51%), Gaps = 12/164 (7%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            DF++  ++G+G+F  V++ +        +    A+K++ K  + K   V  ++ E  I 
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESI-----HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEIVSAV 228
            ++ HP I++L   F+  + +YL+L+  + G +  +L  R   F E++AR +  +I++ +
Sbjct: 66  CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV------MAAHSLNSHNQL 266
            +LH  GI+HRDL   N+L+  + ++      +A      H + 
Sbjct: 126 LYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  148 bits (377), Expect = 2e-43
 Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             +   R +G+G F K F++      D D+  ++A K++ K  ++K +  + M  E  I 
Sbjct: 15  RRYVRGRFLGKGGFAKCFEIS-----DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIH 69

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + H  +V     F+    ++++L+      L     R+    E +AR+Y  +IV    
Sbjct: 70  RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           +LH+  ++HRDLK  N+ ++ D  V
Sbjct: 130 YLHRNRVIHRDLKLGNLFLNEDLEV 154

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  145 bits (369), Expect = 3e-42
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 25/160 (15%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           DFE   V+GQGAFG+V + +         D   YA+K +R      +  +  + +E  +L
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNA------LDSRYYAIKKIRH----TEEKLSTILSEVMLL 56

Query: 170 TKVTHPFIVQLRYSFQ-------------TRSKLYLILDFINGGHLFFHLYRQGIF-RED 215
             + H ++V+   ++               +S L++ +++   G L+  ++ + +  + D
Sbjct: 57  ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116

Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           +      +I+ A+S++H  GI+HRDLKP NI +D   +V 
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVK 156

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  142 bits (360), Expect = 4e-40
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
             +      + +  ++GQGA   VF+ + K      +  ++A+KV    + ++   VD  
Sbjct: 2   GSQSTSNHLWLLSDILGQGATANVFRGRHK-----KTGDLFAIKVFNNISFLRP--VDVQ 54

Query: 163 KAERDILTKVTHPFIVQLR--YSFQTRSKLYLILDFINGGHLFFHLYRQG---IFREDQA 217
             E ++L K+ H  IV+L       T     LI++F   G L+  L          E + 
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114

Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
                ++V  ++HL + GIVHR++KP NI+    
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG 148

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  139 bits (351), Expect = 2e-39
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
             +      + +  ++GQGA   VF+ + K      +  ++A+KV    + ++   VD  
Sbjct: 2   GSQSTSNHLWLLSDILGQGATANVFRGRHK-----KTGDLFAIKVFNNISFLRP--VDVQ 54

Query: 163 KAERDILTKVTHPFIVQLR--YSFQTRSKLYLILDFINGGHLFFHLYRQG---IFREDQA 217
             E ++L K+ H  IV+L       T     LI++F   G L+  L          E + 
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114

Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
                ++V  ++HL + GIVHR++KP NI+    
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG 148

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  138 bits (350), Expect = 4e-39
 Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 10/169 (5%)

Query: 89  QELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKV 147
               H +  +L  E+        +   + +G+G+FGK   VK         DG  Y +K 
Sbjct: 3   HHHHHSSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKST------EDGRQYVIKE 56

Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           +    +  K   +  + E  +L  + HP IVQ R SF+    LY+++D+  GG LF  + 
Sbjct: 57  INISRMSSKEREESRR-EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRIN 115

Query: 208 RQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            Q   +F+EDQ   +  +I  A+ H+H   I+HRD+K +NI +  DG V
Sbjct: 116 AQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTV 164

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  134 bits (340), Expect = 7e-38
 Identities = 47/150 (31%), Positives = 84/150 (56%), Gaps = 11/150 (7%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            F    V+G GAF +VF VK++      +  ++A+K ++K    + + +   + E  +L 
Sbjct: 10  TFIFMEVLGSGAFSEVFLVKQR-----LTGKLFALKCIKKSPAFRDSSL---ENEIAVLK 61

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           K+ H  IV L   +++ +  YL++  ++GG LF  +  +G++ E  A     +++SAV +
Sbjct: 62  KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121

Query: 231 LHKCGIVHRDLKPENIL---MDSDGHVMAA 257
           LH+ GIVHRDLKPEN+L    + +  +M  
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMIT 151

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  135 bits (342), Expect = 1e-37
 Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 18/188 (9%)

Query: 73  GPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKK 132
           GP            +  E       +             +++   +G+GAF  V +   K
Sbjct: 1   GPHMASMTGGQQMGRGSEFMMNASTKFSDN---------YDVKEELGKGAFSVVRRCVHK 51

Query: 133 GVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYL 192
                 +   +A K++    +  ++    ++ E  I  K+ HP IV+L  S Q  S  YL
Sbjct: 52  -----TTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYL 105

Query: 193 ILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-- 250
           + D + GG LF  +  +  + E  A     +I+ ++++ H  GIVHR+LKPEN+L+ S  
Sbjct: 106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 165

Query: 251 -DGHVMAA 257
               V  A
Sbjct: 166 KGAAVKLA 173

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  133 bits (337), Expect = 1e-37
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +++   +G+GAF  V +   K      +   +A K++    +  ++    ++ E  I  K
Sbjct: 8   YDVKEELGKGAFSVVRRCVHK-----TTGLEFAAKIINTKKLSARDFQK-LEREARICRK 61

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP IV+L  S Q  S  YL+ D + GG LF  +  +  + E  A     +I+ ++++ 
Sbjct: 62  LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121

Query: 232 HKCGIVHRDLKPENILMDS---DGHVMAA 257
           H  GIVHR+LKPEN+L+ S      V  A
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLA 150

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  133 bits (337), Expect = 2e-37
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
            +    + I + +G G   KVFQV  +         IYA+K +  +    +    Y   E
Sbjct: 24  SVKGRIYSILKQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEADNQTLDSYRN-E 76

Query: 166 RDILTKVTHP--FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
              L K+      I++L     T   +Y++++      L   L ++      + + Y   
Sbjct: 77  IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKN 135

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSD 251
           ++ AV  +H+ GIVH DLKP N L+   
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDG 163

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  135 bits (341), Expect = 2e-37
 Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 21/202 (10%)

Query: 65  HNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERK----------IGPGDFEI 114
           H+  H   G  PR +          E +H +  +L  + + K          +    + I
Sbjct: 1   HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSI 60

Query: 115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH 174
            + +G G   KVFQV  +         IYA+K +  +    +    Y   E   L K+  
Sbjct: 61  LKQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQ 113

Query: 175 P--FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH 232
               I++L     T   +Y++++      L   L ++      + + Y   ++ AV  +H
Sbjct: 114 HSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172

Query: 233 KCGIVHRDLKPENILMDSDGHV 254
           + GIVH DLKP N L+  DG +
Sbjct: 173 QHGIVHSDLKPANFLIV-DGML 193

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  131 bits (333), Expect = 3e-37
 Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 7/155 (4%)

Query: 100 EAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV 159
           + +   KIG   + +   +G G FGKV    K G        + A+K++ +  I   + V
Sbjct: 3   KHDGRVKIGH--YVLGDTLGVGTFGKV----KIGEHQLTGHKV-AVKILNRQKIRSLDVV 55

Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
             +K E   L    HP I++L     T +  ++++++++GG LF ++ + G   E +AR 
Sbjct: 56  GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 115

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              +I+SAV + H+  +VHRDLKPEN+L+D+  + 
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNA 150

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  132 bits (334), Expect = 3e-37
 Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           + I  ++G+G+FG+V + K +      +   YA+KV+ K +   K+    +  E ++L K
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRI-----TQQEYAVKVINKASAKNKD-TSTILREVELLKK 77

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP I++L    +  S  Y++ +   GG LF  + ++  F E  A     ++ S ++++
Sbjct: 78  LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137

Query: 232 HKCGIVHRDLKPENILMDSD 251
           HK  IVHRDLKPENIL++S 
Sbjct: 138 HKHNIVHRDLKPENILLESK 157

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  135 bits (343), Expect = 4e-37
 Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 5/141 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            ++  RV+G+G+FG+V   K K      +    A+KV+ K  + +K   + +  E  +L 
Sbjct: 27  RYKGQRVLGKGSFGEVILCKDKI-----TGQECAVKVISKRQVKQKTDKESLLREVQLLK 81

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ HP I++L   F+ +   YL+ +   GG LF  +  +  F E  A     +++S +++
Sbjct: 82  QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141

Query: 231 LHKCGIVHRDLKPENILMDSD 251
           +HK  IVHRDLKPEN+L++S 
Sbjct: 142 MHKNKIVHRDLKPENLLLESK 162

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  132 bits (334), Expect = 5e-37
 Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 11/150 (7%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDI 168
            +F I + +G+G F +V++           DG   A+K ++   ++          E D+
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACL------LDGVPVALKKVQIFDLMDAKARADCIKEIDL 85

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAEI 224
           L ++ HP +++   SF   ++L ++L+  + G L   +        +  E     Y  ++
Sbjct: 86  LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            SA+ H+H   ++HRD+KP N+ + + G V
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVV 175

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  132 bits (335), Expect = 7e-37
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
            +    + I + +G G   KVFQV  +         IYA+K +  +    +    Y   E
Sbjct: 5   SVKGRIYSILKQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEADNQTLDSYRN-E 57

Query: 166 RDILTKVTHP--FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
              L K+      I++L     T   +Y++++      L   L ++      + + Y   
Sbjct: 58  IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKN 116

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++ AV  +H+ GIVH DLKP N L+  DG +
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIV-DGML 146

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  132 bits (334), Expect = 1e-36
 Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 27/215 (12%)

Query: 46  HNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESER 105
           H++   +       +       S +        +L     +     +  +D         
Sbjct: 3   HHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSD--------- 53

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
                 FE+   +G+GA   V++ K+KG     +   YA+KV     + K      ++ E
Sbjct: 54  -----FFEVESELGRGATSIVYRCKQKG-----TQKPYALKV-----LKKTVDKKIVRTE 98

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L +++HP I++L+  F+T +++ L+L+ + GG LF  +  +G + E  A     +I+
Sbjct: 99  IGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL 158

Query: 226 SAVSHLHKCGIVHRDLKPENILM---DSDGHVMAA 257
            AV++LH+ GIVHRDLKPEN+L      D  +  A
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIA 193

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  130 bits (329), Expect = 2e-36
 Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 8/142 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH---VDYMKAERDI 168
           +E+   +G G F  V + ++K      +   YA K ++K  +         + ++ E +I
Sbjct: 7   YEMGEELGSGQFAIVRKCRQK-----GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           L ++ HP I+ L   F+ ++ + LIL+ ++GG LF  L  +    ED+A  +  +I+  V
Sbjct: 62  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121

Query: 229 SHLHKCGIVHRDLKPENILMDS 250
            +LH   I H DLKPENI++  
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLD 143

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  132 bits (333), Expect = 2e-36
 Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 8/142 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH---VDYMKAERDI 168
           ++I   +G G F  V + ++K      +   YA K ++K            + ++ E  I
Sbjct: 14  YDIGEELGSGQFAIVKKCREK-----STGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           L +V HP I+ L   ++ R+ + LIL+ ++GG LF  L ++    E++A  +  +I+  V
Sbjct: 69  LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128

Query: 229 SHLHKCGIVHRDLKPENILMDS 250
           ++LH   I H DLKPENI++  
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLD 150

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  129 bits (327), Expect = 2e-36
 Identities = 36/152 (23%), Positives = 77/152 (50%), Gaps = 9/152 (5%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
           +   +    +++ + +G+GA+G+V    +  V+   ++   A+K++     +     + +
Sbjct: 2   AVPFVED--WDLVQTLGEGAYGEV----QLAVNR-VTEEAVAVKIVDMKRAVD--CPENI 52

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           K E  I   + H  +V+     +  +  YL L++ +GG LF  +       E  A+ +  
Sbjct: 53  KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH 112

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++++ V +LH  GI HRD+KPEN+L+D   ++
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNL 144

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  133 bits (337), Expect = 3e-36
 Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           ++++F  +G+GAF  V +  K       +   YA  ++    +  ++H   ++ E  I  
Sbjct: 12  EYQLFEELGKGAFSVVRRCVKVL-----AGQEYAAMIINTKKLSARDHQK-LEREARICR 65

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP IV+L  S       YLI D + GG LF  +  +  + E  A     +I+ AV H
Sbjct: 66  LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125

Query: 231 LHKCGIVHRDLKPENILMDS---DGHVMAA 257
            H+ G+VHR+LKPEN+L+ S      V  A
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLA 155

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  130 bits (330), Expect = 3e-36
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH---VDYMKAERDI 168
           ++I   +G G F  V + ++K      +   YA K ++K            + ++ E  I
Sbjct: 14  YDIGEELGSGQFAIVKKCREK-----STGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           L +V H  ++ L   ++ R+ + LIL+ ++GG LF  L ++    E++A  +  +I+  V
Sbjct: 69  LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128

Query: 229 SHLHKCGIVHRDLKPENILMDS 250
           ++LH   I H DLKPENI++  
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLD 150

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  133 bits (337), Expect = 3e-36
 Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 6/141 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            + I  ++G+G+FG+V + K +      +   YA+KV+ K +   K+    +  E ++L 
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRI-----TQQEYAVKVINKASAKNKD-TSTILREVELLK 76

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           K+ HP I++L    +  S  Y++ +   GG LF  + ++  F E  A     ++ S +++
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136

Query: 231 LHKCGIVHRDLKPENILMDSD 251
           +HK  IVHRDLKPENIL++S 
Sbjct: 137 MHKHNIVHRDLKPENILLESK 157

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  129 bits (326), Expect = 4e-36
 Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 8/140 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           + +   +G+G++G+V    +KG     +    A K + K        VD  K E +I+  
Sbjct: 11  YTLENTIGRGSWGEVKIAVQKG-----TRIRRAAKKIPKY---FVEDVDRFKQEIEIMKS 62

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP I++L  +F+  + +YL+++   GG LF  +  + +FRE  A     +++SAV++ 
Sbjct: 63  LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYC 122

Query: 232 HKCGIVHRDLKPENILMDSD 251
           HK  + HRDLKPEN L  +D
Sbjct: 123 HKLNVAHRDLKPENFLFLTD 142

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  130 bits (329), Expect = 4e-36
 Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 8/142 (5%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH---VDYMKAERDI 168
           ++    +G G F  V + ++K      +   YA K ++K            + ++ E  I
Sbjct: 13  YDTGEELGSGQFAVVKKCREK-----STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           L ++ HP ++ L   ++ ++ + LIL+ + GG LF  L  +    E++A  +  +I++ V
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127

Query: 229 SHLHKCGIVHRDLKPENILMDS 250
            +LH   I H DLKPENI++  
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLD 149

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  130 bits (329), Expect = 6e-36
 Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 11/145 (7%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER--DIL 169
           +E+  V+G+G F  V +   +     ++   +A+K++          +     +R   I 
Sbjct: 26  YELCEVIGKGPFSVVRRCINR-----ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAEIV 225
             + HP IV+L  ++ +   LY++ +F++G  L F + ++     ++ E  A  Y  +I+
Sbjct: 81  HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140

Query: 226 SAVSHLHKCGIVHRDLKPENILMDS 250
            A+ + H   I+HRD+KP  +L+ S
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLAS 165

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  132 bits (335), Expect = 8e-36
 Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 6/141 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            ++  + +G GA+G+V   + K      +    A+K++RK ++   ++   +  E  +L 
Sbjct: 38  MYQRVKKLGSGAYGEVLLCRDKV-----THVERAIKIIRKTSVSTSSNSK-LLEEVAVLK 91

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP I++L   F+ +   YL+++   GG LF  +  +  F E  A     +++S V++
Sbjct: 92  LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTY 151

Query: 231 LHKCGIVHRDLKPENILMDSD 251
           LHK  IVHRDLKPEN+L++S 
Sbjct: 152 LHKHNIVHRDLKPENLLLESK 172

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  129 bits (327), Expect = 1e-35
 Identities = 53/243 (21%), Positives = 91/243 (37%), Gaps = 18/243 (7%)

Query: 26  SASSPDFDFT-EVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSL 84
            +S  D  F  E        RH          +            + +    +    +  
Sbjct: 7   HSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKK--LNDA 64

Query: 85  PLQIQELEHENDAELEAESERKIGPGDF----EIFRVVGQGAFGKVFQVKKKGVDDGDSD 140
             +  E  +      E E        +F    +   V+G+G    V +   +      + 
Sbjct: 65  QPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHR-----ATG 119

Query: 141 GIYAMKVMRKDTIIKKNHV-----DYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLIL 194
             +A+K+M                +  + E  IL +V  HP I+ L  S+++ S ++L+ 
Sbjct: 120 HEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179

Query: 195 DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           D +  G LF +L  +    E + R     ++ AVS LH   IVHRDLKPENIL+D +  +
Sbjct: 180 DLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQI 239

Query: 255 MAA 257
             +
Sbjct: 240 RLS 242

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  127 bits (322), Expect = 3e-35
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 12/153 (7%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD---- 167
           +E   ++G+G    V +   K      +   YA+K++        +  +  +        
Sbjct: 19  YEPKEILGRGVSSVVRRCIHK-----PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 73

Query: 168 --ILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
             IL KV+ HP I+QL+ +++T +  +L+ D +  G LF +L  +    E + R     +
Sbjct: 74  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           +  +  LHK  IVHRDLKPENIL+D D ++   
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLT 166

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  128 bits (323), Expect = 3e-35
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 12/137 (8%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-H 174
           + +G+G+F    +   K      S+  +A+K      II K      + E   L     H
Sbjct: 17  KPLGEGSFSICRKCVHK-----KSNQAFAVK------IISKRMEANTQKEITALKLCEGH 65

Query: 175 PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC 234
           P IV+L   F  +   +L+++ +NGG LF  + ++  F E +A +   ++VSAVSH+H  
Sbjct: 66  PNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV 125

Query: 235 GIVHRDLKPENILMDSD 251
           G+VHRDLKPEN+L   +
Sbjct: 126 GVVHRDLKPENLLFTDE 142

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  128 bits (323), Expect = 3e-35
 Identities = 36/152 (23%), Positives = 77/152 (50%), Gaps = 9/152 (5%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
           +   +    +++ + +G+GA+G+V    +  V+   ++   A+K++     +     + +
Sbjct: 2   AVPFVED--WDLVQTLGEGAYGEV----QLAVNR-VTEEAVAVKIVDMKRAVD--CPENI 52

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           K E  I   + H  +V+     +  +  YL L++ +GG LF  +       E  A+ +  
Sbjct: 53  KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH 112

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++++ V +LH  GI HRD+KPEN+L+D   ++
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNL 144

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  127 bits (320), Expect = 7e-35
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 14/155 (9%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER---- 166
           ++ + + +G GA G+V    ++      +    A+K++ K      +  +   A      
Sbjct: 11  EYIMSKTLGSGACGEVKLAFER-----KTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 167 -DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
            +IL K+ HP I++++  F      Y++L+ + GG LF  +      +E   + Y  +++
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124

Query: 226 SAVSHLHKCGIVHRDLKPENILMDS---DGHVMAA 257
            AV +LH+ GI+HRDLKPEN+L+ S   D  +   
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 159

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  126 bits (318), Expect = 7e-35
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 11/144 (7%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F   R +G GAFG V  V+++      S     +K + KD    +  ++ ++AE ++L  
Sbjct: 24  FIFKRKLGSGAFGDVHLVEERS-----SGLERVIKTINKDRS--QVPMEQIEAEIEVLKS 76

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLF----FHLYRQGIFREDQARFYTAEIVSA 227
           + HP I+++   F+    +Y++++   GG L         R     E        ++++A
Sbjct: 77  LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136

Query: 228 VSHLHKCGIVHRDLKPENILMDSD 251
           +++ H   +VH+DLKPENIL    
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDT 160

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  127 bits (320), Expect = 8e-35
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 16/158 (10%)

Query: 101 AESERKIGPGDFEIFRVVGQGAFGKVFQVKKKG--VDDGDSDGIYAMKVMRKDTIIKKNH 158
           A+ +  IG   + + + +G+G F KV    K    +  G      A+K++ K    + N 
Sbjct: 8   ADEQPHIGN--YRLLKTIGKGNFAKV----KLARHILTGRE---VAIKIIDKT---QLNP 55

Query: 159 VDYMKAER--DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQ 216
               K  R   I+  + HP IV+L    +T   LYLI+++ +GG +F +L   G  +E +
Sbjct: 56  TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE 115

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           AR    +IVSAV + H+  IVHRDLK EN+L+D+D ++
Sbjct: 116 ARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNI 153

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  127 bits (320), Expect = 9e-35
 Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 11/151 (7%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER--- 166
             +     +G GAFG V       VD   +  +  +K ++K+ +++   ++  K  +   
Sbjct: 24  QKYSTMSPLGSGAFGFV----WTAVDKEKNKEV-VVKFIKKEKVLEDCWIEDPKLGKVTL 78

Query: 167 --DILTKVTHPFIVQLRYSFQTRSKLYLILDF-INGGHLFFHLYRQGIFREDQARFYTAE 223
              IL++V H  I+++   F+ +    L+++   +G  LF  + R     E  A +   +
Sbjct: 79  EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +VSAV +L    I+HRD+K ENI++  D  +
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTI 169

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  126 bits (318), Expect = 1e-34
 Identities = 37/150 (24%), Positives = 82/150 (54%), Gaps = 11/150 (7%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY-MKAERDI 168
           G + +  ++G+G++GKV     K V D ++    A+K+++K  + +  + +  +K E  +
Sbjct: 5   GKYLMGDLLGEGSYGKV-----KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQL 59

Query: 169 LTKVTHPFIVQLR--YSFQTRSKLYLILDFINGGH--LFFHLYRQGIFREDQARFYTAEI 224
           L ++ H  ++QL      + + K+Y+++++   G   +   +  +  F   QA  Y  ++
Sbjct: 60  LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV-PEKRFPVCQAHGYFCQL 118

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +  + +LH  GIVH+D+KP N+L+ + G +
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGGTL 148

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  125 bits (315), Expect = 1e-34
 Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 19/156 (12%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           D+E+   +G G++G+  ++++K      SDG I   K +   ++ +      + +E ++L
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRK------SDGKILVWKELDYGSMTEAE-KQMLVSEVNLL 59

Query: 170 TKVTHPFIVQLRYSFQTRS--KLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAE 223
            ++ HP IV+       R+   LY+++++  GG L   + +         E+       +
Sbjct: 60  RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119

Query: 224 IVSAVSHLHKCG-----IVHRDLKPENILMDSDGHV 254
           +  A+   H+       ++HRDLKP N+ +D   +V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV 155

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  129 bits (325), Expect = 2e-34
 Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 100 EAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV 159
           + +   KIG   + +   +G G FGKV    K G  +     + A+K++ +  I   + V
Sbjct: 8   KHDGRVKIGH--YILGDTLGVGTFGKV----KVGKHELTGHKV-AVKILNRQKIRSLDVV 60

Query: 160 DYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF 219
             ++ E   L    HP I++L     T S +++++++++GG LF ++ + G   E ++R 
Sbjct: 61  GKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR 120

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              +I+S V + H+  +VHRDLKPEN+L+D+  + 
Sbjct: 121 LFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA 155

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  125 bits (316), Expect = 3e-34
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 10/141 (7%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           + I   +G+G FG V +  +       S   Y  K ++     K      +K E  IL  
Sbjct: 7   YMIAEDLGRGEFGIVHRCVETS-----SKKTYMAKFVKV----KGTDQVLVKKEISILNI 57

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLF-FHLYRQGIFREDQARFYTAEIVSAVSH 230
             H  I+ L  SF++  +L +I +FI+G  +F           E +   Y  ++  A+  
Sbjct: 58  ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117

Query: 231 LHKCGIVHRDLKPENILMDSD 251
           LH   I H D++PENI+  + 
Sbjct: 118 LHSHNIGHFDIRPENIIYQTR 138

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  127 bits (321), Expect = 3e-34
 Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)

Query: 100 EAESERKIGPGDF----EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK 155
               ++ + P        + + +G GA G+V    ++      +    A++++ K     
Sbjct: 121 LTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER-----KTCKKVAIRIISKRKFAI 175

Query: 156 KNHVDYMKAER-----DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG 210
            +  +   A       +IL K+ HP I++++  F      Y++L+ + GG LF  +    
Sbjct: 176 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNK 234

Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
             +E   + Y  +++ AV +LH+ GI+HRDLKPEN+L+ S 
Sbjct: 235 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 275

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  125 bits (315), Expect = 4e-34
 Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 18/193 (9%)

Query: 65  HNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFG 124
           H+  H   G  PR +  +            +  +L    E++     +++  ++G G FG
Sbjct: 5   HHHHHHSSGLVPRGSHMAPCN-------DLHATKLAPGKEKEPLESQYQVGPLLGSGGFG 57

Query: 125 KVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM---KAERDILTKVTH--PFIVQ 179
            V+   +  V D       A+K + KD I     +        E  +L KV+     +++
Sbjct: 58  SVYSGIR--VSDNLP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 112

Query: 180 LRYSFQTRSKLYLILDFING-GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVH 238
           L   F+      LIL+       LF  +  +G  +E+ AR +  +++ AV H H CG++H
Sbjct: 113 LLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLH 172

Query: 239 RDLKPENILMDSD 251
           RD+K ENIL+D +
Sbjct: 173 RDIKDENILIDLN 185

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  128 bits (324), Expect = 5e-34
 Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 9/142 (6%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           ++I   +G GAFG V +V ++      +   +A K +       ++  + ++ E   ++ 
Sbjct: 159 YDIHEELGTGAFGVVHRVTERA-----TGNNFAAKFVMTP---HESDKETVRKEIQTMSV 210

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLF-FHLYRQGIFREDQARFYTAEIVSAVSH 230
           + HP +V L  +F+  +++ +I +F++GG LF           ED+A  Y  ++   + H
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270

Query: 231 LHKCGIVHRDLKPENILMDSDG 252
           +H+   VH DLKPENI+  +  
Sbjct: 271 MHENNYVHLDLKPENIMFTTKR 292

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  125 bits (316), Expect = 5e-34
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 9/143 (6%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             ++  + +G G FG       + + D  +  + A+K + +   I +N    ++ E    
Sbjct: 20  DRYDFVKDIGSGNFGVA-----RLMRDKLTKELVAVKYIERGAAIDEN----VQREIINH 70

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + HP IV+ +    T + L +I+++ +GG L+  +   G F ED+ARF+  +++S VS
Sbjct: 71  RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS 130

Query: 230 HLHKCGIVHRDLKPENILMDSDG 252
           + H   I HRDLK EN L+D   
Sbjct: 131 YCHSMQICHRDLKLENTLLDGSP 153

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  124 bits (313), Expect = 5e-34
 Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
               ++    + +   +G+G++G V    K   ++ D+   YAMKV+ K  +I++     
Sbjct: 7   GDCVQLNQ--YTLKDEIGKGSYGVV----KLAYNENDNT-YYAMKVLSKKKLIRQAGFPR 59

Query: 162 MKAERD-----------------------ILTKVTHPFIVQLR--YSFQTRSKLYLILDF 196
               R                        IL K+ HP +V+L           LY++ + 
Sbjct: 60  RPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFEL 119

Query: 197 INGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +N G +   +       EDQARFY  +++  + +LH   I+HRD+KP N+L+  DGH+
Sbjct: 120 VNQGPVM-EVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHI 176

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  125 bits (317), Expect = 6e-34
 Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 9/142 (6%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           ++I   +G GAFG V +  +K      +  ++  K +     + K  V   K E  I+ +
Sbjct: 53  YDILEELGSGAFGVVHRCVEKA-----TGRVFVAKFINTPYPLDKYTV---KNEISIMNQ 104

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSH 230
           + HP ++ L  +F+ + ++ LIL+F++GG LF  +  +     E +   Y  +    + H
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 164

Query: 231 LHKCGIVHRDLKPENILMDSDG 252
           +H+  IVH D+KPENI+ ++  
Sbjct: 165 MHEHSIVHLDIKPENIMCETKK 186

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  124 bits (313), Expect = 6e-34
 Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 16/157 (10%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
            I    +   + +G+G F  V  V+            YA+K +      ++   +  + E
Sbjct: 25  IIDNKHYLFIQKLGEGGFSYVDLVEGL-----HDGHFYALKRILCH---EQQDREEAQRE 76

Query: 166 RDILTKVTHPFIVQLRYSFQTRS----KLYLILDFINGGHLFFHLYRQ----GIFREDQA 217
            D+     HP I++L            + +L+L F   G L+  + R         EDQ 
Sbjct: 77  ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI 136

Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            +    I   +  +H  G  HRDLKP NIL+  +G  
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQP 173

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  124 bits (314), Expect = 7e-34
 Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 8/154 (5%)

Query: 101 AESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD 160
           A S+R IGP  + I   +G+G+FGKV    K          + A+K + +  + K +   
Sbjct: 2   AISKRHIGP--YIIRETLGEGSFGKV----KLATHYKTQQKV-ALKFISRQLLKKSDMHM 54

Query: 161 YMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
            ++ E   L  + HP I++L     T + + +++++  GG LF ++  +    ED+ R +
Sbjct: 55  RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRF 113

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +I+ A+ + H+  IVHRDLKPEN+L+D + +V
Sbjct: 114 FQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNV 147

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  124 bits (314), Expect = 7e-34
 Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 47/183 (25%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER--DI 168
            + +   +GQG++G V    +       +  I A+K+M K+ I + N  D  + +    +
Sbjct: 27  KYHLKGAIGQGSYGVVRVAIEN-----QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRL 81

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG------------------ 210
           + K+ HP I +L   ++    + L+++  +GGHL   L                      
Sbjct: 82  MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141

Query: 211 ----------------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM 248
                                 + RE        +I SA+ +LH  GI HRD+KPEN L 
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201

Query: 249 DSD 251
            ++
Sbjct: 202 STN 204

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  124 bits (313), Expect = 7e-34
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HP 175
           V+G+GA  +V            +   YA+K++ K      +    +  E ++L +   H 
Sbjct: 20  VLGEGAHARVQTCINLI-----TSQEYAVKIIEKQ---PGHIRSRVFREVEMLYQCQGHR 71

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
            +++L   F+   + YL+ + + GG +  H++++  F E +A     ++ SA+  LH  G
Sbjct: 72  NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131

Query: 236 IVHRDLKPENILMDSDGHV 254
           I HRDLKPENIL +    V
Sbjct: 132 IAHRDLKPENILCEHPNQV 150

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  127 bits (321), Expect = 8e-34
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 15/151 (9%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK----------KNHVD 160
            +   R +G GA+G+V   K+K           A+KV++K    K          +   +
Sbjct: 37  SYFKVRKLGSGAYGEVLLCKEKN-----GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91

Query: 161 YMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
            +  E  +L  + HP I++L   F+ +   YL+ +F  GG LF  +  +  F E  A   
Sbjct: 92  EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANI 151

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
             +I+S + +LHK  IVHRD+KPENIL+++ 
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENK 182

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  124 bits (314), Expect = 9e-34
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 13/142 (9%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            +E+   +G G++    +   K      ++  +A+K      II K+  D    E +IL 
Sbjct: 23  GYEVKEDIGVGSYSVCKRCIHK-----ATNMEFAVK------IIDKSKRD-PTEEIEILL 70

Query: 171 KVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           +   HP I+ L+  +     +Y++ + + GG L   + RQ  F E +A      I   V 
Sbjct: 71  RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVE 130

Query: 230 HLHKCGIVHRDLKPENILMDSD 251
           +LH  G+VHRDLKP NIL   +
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDE 152

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  121 bits (306), Expect = 3e-33
 Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 32/163 (19%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           DF+   ++G G FG+VF+ K +       DG  Y +K ++ +        +  + E   L
Sbjct: 12  DFKEIELIGSGGFGQVFKAKHR------IDGKTYVIKRVKYNN-------EKAEREVKAL 58

Query: 170 TKVTHPFIVQLRYSFQ----------------TRSKLYLILDFINGGHLFFHL--YRQGI 211
            K+ H  IV     +                     L++ ++F + G L   +   R   
Sbjct: 59  AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118

Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +  A     +I   V ++H   +++RDLKP NI +     V
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQV 161

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  126 bits (318), Expect = 4e-33
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G +E+   +G G FG V +   +     D+    A+K  R++   K  + +    E  I+
Sbjct: 14  GPWEMKERLGTGGFGYVLRWIHQ-----DTGEQVAIKQCRQELSPK--NRERWCLEIQIM 66

Query: 170 TKVTHPFIVQLRYSFQTRSKL------YLILDFINGGHLFFHLY---RQGIFREDQARFY 220
            K+ HP +V  R       KL       L +++  GG L  +L         +E   R  
Sbjct: 67  KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
            ++I SA+ +LH+  I+HRDLKPENI++     
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 159

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  122 bits (307), Expect = 5e-33
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 13/179 (7%)

Query: 81  SSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSD 140
             + PLQ                +R+    ++ +  ++G+G FG VF   +  + D    
Sbjct: 2   MLTKPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHR--LTDRLQ- 58

Query: 141 GIYAMKVMRKDTIIKKNHVDYM---KAERDILTKV----THPFIVQLRYSFQTRSKLYLI 193
              A+KV+ ++ ++  + +        E  +L KV     HP +++L   F+T+    L+
Sbjct: 59  --VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV 116

Query: 194 LDF-INGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           L+  +    LF ++  +G   E  +R +  ++V+A+ H H  G+VHRD+K ENIL+D  
Sbjct: 117 LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLR 175

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  121 bits (305), Expect = 5e-33
 Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 9/158 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           +F     +G G FG VF+  K+   DG    IYA+K  +K      +  + ++       
Sbjct: 12  EFHELEKIGSGEFGSVFKCVKR--LDGC---IYAIKRSKKPLAGSVDEQNALREVYAHAV 66

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGG----HLFFHLYRQGIFREDQARFYTAEIVS 226
              H  +V+   ++     + +  ++ NGG     +  +      F+E + +    ++  
Sbjct: 67  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126

Query: 227 AVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN 264
            + ++H   +VH D+KP NI +       AA      +
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDED 164

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  122 bits (308), Expect = 1e-32
 Identities = 32/141 (22%), Positives = 71/141 (50%), Gaps = 9/141 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
                 ++G G FG+V + ++       +    A K+++          + +K E  ++ 
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETA-----TGLKLAAKIIKTR---GMKDKEEVKNEISVMN 141

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVS 229
           ++ H  ++QL  +F++++ + L++++++GG LF  +  +     E     +  +I   + 
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR 201

Query: 230 HLHKCGIVHRDLKPENILMDS 250
           H+H+  I+H DLKPENIL  +
Sbjct: 202 HMHQMYILHLDLKPENILCVN 222

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  120 bits (302), Expect = 3e-32
 Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 92  EHENDAELEAESERKIGPGDFEIF-----RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMK 146
            H +  +L  E+       +F  F     + +G+G F  V Q   K      +   YA K
Sbjct: 6   HHSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISK-----STGQEYAAK 60

Query: 147 VMRKDTIIKKNHVDYMKAERDILTKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLFFH 205
            ++K    +    + +  E  +L      P ++ L   ++  S++ LIL++  GG +F  
Sbjct: 61  FLKKRRRGQDCRAE-ILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSL 119

Query: 206 LY--RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM---DSDGHVMAA 257
                  +  E+       +I+  V +LH+  IVH DLKP+NIL+      G +   
Sbjct: 120 CLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIV 176

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  120 bits (302), Expect = 6e-32
 Identities = 37/248 (14%), Positives = 71/248 (28%), Gaps = 43/248 (17%)

Query: 46  HNNQSPASTSASLGDP-----QVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELE 100
           H++ S    +     P     + + NR       +    + S+    +            
Sbjct: 4   HHHHSSGRENLYFQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFR 63

Query: 101 AESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD 160
            ESE    P       V+GQ       +   +  + G+    + + V         N + 
Sbjct: 64  VESELGERPRTLVRGTVLGQEDPYAYLEATDQ--ETGE---SFEVHVPYFTERPPSNAIK 118

Query: 161 YMKAER-------------------------DILTKVTHPFIVQLRYSFQTRSKLYLIL- 194
            MK E                          D++       ++++R   +    L     
Sbjct: 119 QMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFL 178

Query: 195 -------DFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL 247
                      G  L  H               T +++  ++ LH  G+VH  L+P +I+
Sbjct: 179 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIV 238

Query: 248 MDSDGHVM 255
           +D  G V 
Sbjct: 239 LDQRGGVF 246

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  116 bits (292), Expect = 9e-31
 Identities = 41/201 (20%), Positives = 81/201 (40%), Gaps = 14/201 (6%)

Query: 52  ASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGD 111
            S S S G    + + + ++   S +            E     +     + E +     
Sbjct: 1   GSGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETED-NEGVLLTEKLKPVDYEYREEVHW 59

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
                 VG+G+FG+V     +  D   +    A+K +R +    +        E      
Sbjct: 60  MTHQPRVGRGSFGEVH----RMKD-KQTGFQCAVKKVRLEVFRVE--------ELVACAG 106

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           ++ P IV L  + +    + + ++ + GG L   + + G   ED+A +Y  + +  + +L
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 166

Query: 232 HKCGIVHRDLKPENILMDSDG 252
           H   I+H D+K +N+L+ SDG
Sbjct: 167 HTRRILHGDVKADNVLLSSDG 187

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  114 bits (288), Expect = 2e-30
 Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-IYAMKVMRKDTIIKKNHVDYMKAER--D 167
           DFE  + +G+G FG VF+ K K       D   YA+K +R    +    +   K  R   
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNK------VDDCNYAIKRIR----LPNRELAREKVMREVK 55

Query: 168 ILTKVTHPFIVQLRYSF------------QTRSKLYLILDFINGGHLFFHLYRQG---IF 212
            L K+ HP IV+   ++              +  LY+ +      +L   +  +      
Sbjct: 56  ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115

Query: 213 REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                     +I  AV  LH  G++HRDLKP NI    D  V
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVV 157

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  114 bits (288), Expect = 1e-29
 Identities = 44/211 (20%), Positives = 90/211 (42%), Gaps = 25/211 (11%)

Query: 48  NQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKI 107
           + S   +            +  +   P P        P Q  +   ++  +++  +    
Sbjct: 3   SNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIID- 61

Query: 108 GPGDFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
              D+++  +V+G G  GKV Q+  K      +   +A+K+++     ++        E 
Sbjct: 62  ---DYKVTSQVLGLGINGKVLQIFNKR-----TQEKFALKMLQDCPKARR--------EV 105

Query: 167 DILTKVT-HPFIVQLRYSFQT----RSKLYLILDFINGGHLFFHLYRQGI--FREDQARF 219
           ++  + +  P IV++   ++     R  L ++++ ++GG LF  +  +G   F E +A  
Sbjct: 106 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 165

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
               I  A+ +LH   I HRD+KPEN+L  S
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTS 196

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  112 bits (281), Expect = 2e-29
 Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 21/148 (14%)

Query: 111 DFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           D+++  +V+G G  GKV Q+  K      +   +A+K+++     ++        E ++ 
Sbjct: 18  DYKVTSQVLGLGINGKVLQIFNKR-----TQEKFALKMLQDCPKARR--------EVELH 64

Query: 170 TKVT-HPFIVQLRYSFQT----RSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTA 222
            + +  P IV++   ++     R  L ++++ ++GG LF  +  +G   F E +A     
Sbjct: 65  WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDS 250
            I  A+ +LH   I HRD+KPEN+L  S
Sbjct: 125 SIGEAIQYLHSINIAHRDVKPENLLYTS 152

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  114 bits (286), Expect = 3e-29
 Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 15/161 (9%)

Query: 94  ENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI 153
           E D   E  S   +G   F    V+G GA G +     +G+ D       A+K       
Sbjct: 8   EQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIV---YRGMFDNRD---VAVK------R 55

Query: 154 IKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI- 211
           I      +   E  +L +   HP +++   + + R   Y+ ++      L  ++ ++   
Sbjct: 56  ILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFA 114

Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
               +      +  S ++HLH   IVHRDLKP NIL+    
Sbjct: 115 HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPN 155

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  109 bits (274), Expect = 4e-28
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 20/141 (14%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HP 175
           V+G G  GKV +   +      +    A+K++      ++        E D   + +  P
Sbjct: 36  VLGLGVNGKVLECFHRR-----TGQKCALKLLYDSPKARQ--------EVDHHWQASGGP 82

Query: 176 FIVQLRYSFQT----RSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVS 229
            IV +   ++     +  L +I++ + GG LF  +  +G   F E +A     +I +A+ 
Sbjct: 83  HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142

Query: 230 HLHKCGIVHRDLKPENILMDS 250
            LH   I HRD+KPEN+L  S
Sbjct: 143 FLHSHNIAHRDVKPENLLYTS 163

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  109 bits (274), Expect = 2e-27
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 21/161 (13%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
               +++G G+ G V     +G   G      A+K       +  +  D    E  +LT+
Sbjct: 17  VVSEKILGYGSSGTV---VFQGSFQGRP---VAVK------RMLIDFCDIALMEIKLLTE 64

Query: 172 VT-HPFIVQLRYSFQTRSKLYLILDFINGGHLF-------FHLYRQGIFREDQARFYTAE 223
              HP +++   S  T   LY+ L+  N   L               + +E        +
Sbjct: 65  SDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYNPISLLRQ 123

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN 264
           I S V+HLH   I+HRDLKP+NIL+ +     A     + N
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  108 bits (270), Expect = 2e-27
 Identities = 28/210 (13%), Positives = 62/210 (29%), Gaps = 42/210 (20%)

Query: 96  DAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK 155
           +AE   +S    G    ++   +  G    VF V+       +    +A+KV        
Sbjct: 48  NAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDV-----ERLEDFALKVFTMGAENS 102

Query: 156 KNHVDYMKAERDILTKVTHPFIVQLR--------------------------YSFQTRSK 189
           ++ ++ +        ++      + R                                + 
Sbjct: 103 RSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVAN 162

Query: 190 LYLILDFING------GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKP 243
             L++   +         L F    +G          TA+++   ++L   G+VH    P
Sbjct: 163 YLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTP 222

Query: 244 ENILMDSDGHVM-----AAHSLNSHNQLCC 268
           +N+ +  DG +M     A   + +      
Sbjct: 223 DNLFIMPDGRLMLGDVSALWKVGTRGPASS 252

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  107 bits (269), Expect = 2e-27
 Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 21/162 (12%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           ++G     + RV+ +G F  V++ +     D  S   YA+K +  +   ++     +  E
Sbjct: 24  ELGELRLRVRRVLAEGGFAFVYEAQ-----DVGSGREYALKRLLSN---EEEKNRAIIQE 75

Query: 166 RDILTKVT-HPFIVQLRYSF-------QTRSKLYLILDFINGGHLFFHLYR---QGIFRE 214
              + K++ HP IVQ   +         T    +L+L  +  G L   L +   +G    
Sbjct: 76  VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC 135

Query: 215 DQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDSDGHV 254
           D       +   AV H+H+    I+HRDLK EN+L+ + G +
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTI 177

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  108 bits (270), Expect = 3e-27
 Identities = 34/225 (15%), Positives = 64/225 (28%), Gaps = 38/225 (16%)

Query: 64  IHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAF 123
           + NR       +    + S+    +             ESE    P       V+GQ   
Sbjct: 32  LFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDP 91

Query: 124 GKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER----------------- 166
               +       D ++   + + V         N +  MK E                  
Sbjct: 92  YAYLEAT-----DQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV 146

Query: 167 --------DILTKVTHPFIVQLRYSFQTRSKLYLILDFIN--------GGHLFFHLYRQG 210
                   D++       ++++R   +    L     +          G  L  H     
Sbjct: 147 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 206

Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
                     T +++  ++ LH  G+VH  L+P +I++D  G V 
Sbjct: 207 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVF 251

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  103 bits (259), Expect = 3e-26
 Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)

Query: 100 EAESERKIGPGDFEIFR-----VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII 154
           E + E  +   D+E        V+G+G +G V+     G D   +    A+K + +    
Sbjct: 7   EGDCESDLLEYDYEYDENGDRVVLGKGTYGIVY----AGRD-LSNQVRIAIKEIPER--- 58

Query: 155 KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG---HLFFHLYRQGI 211
              +   +  E  +   + H  IVQ   SF     + + ++ + GG    L    +    
Sbjct: 59  DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK 118

Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHV 254
             E    FYT +I+  + +LH   IVHRD+K +N+L+++  G +
Sbjct: 119 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVL 162

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  103 bits (258), Expect = 5e-26
 Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 9/164 (5%)

Query: 92  EHENDAELEAESERKIGPGD-FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRK 150
                + L      K  P + F     +G+G+FG+VF    KG+D+  +  + A+K++  
Sbjct: 3   HSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVF----KGIDN-RTQKVVAIKIIDL 57

Query: 151 DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG 210
           +    ++ ++ ++ E  +L++   P++ +   S+   +KL++I++++ GG     L   G
Sbjct: 58  EEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL-DLLEPG 114

Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              E Q      EI+  + +LH    +HRD+K  N+L+   G V
Sbjct: 115 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV 158

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  100 bits (251), Expect = 6e-25
 Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 31/201 (15%)

Query: 64  IHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGD----FEIFRVVG 119
           +H+  H   G       + +L  Q   + HE   + +A     +  GD     + +  +G
Sbjct: 1   MHHHHHHSSGVDLG---TENLYFQSGVVTHE---QFKAALRMVVDQGDPRLLLDSYVKIG 54

Query: 120 QGAFGKVFQVKKKGVDDGDSDGIYAMKVM------RKDTIIKKNHVDYMKAERDILTKVT 173
           +G+ G V   ++K      S    A+K+M      R++ +           E  I+    
Sbjct: 55  EGSTGIVCLAREK-----HSGRQVAVKMMDLRKQQRRELLFN---------EVVIMRDYQ 100

Query: 174 HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK 233
           H  +V++  S+    +L+++++F+ GG L   +  Q    E+Q       ++ A+++LH 
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQVRLNEEQIATVCEAVLQALAYLHA 159

Query: 234 CGIVHRDLKPENILMDSDGHV 254
            G++HRD+K ++IL+  DG V
Sbjct: 160 QGVIHRDIKSDSILLTLDGRV 180

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 99.8 bits (249), Expect = 2e-24
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 5/143 (3%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F   R +G G+FG V+       D   +  + A+K M             +  E   L K
Sbjct: 56  FSDLREIGHGSFGAVY----FARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 110

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP  +Q R  +      +L++++  G         +   +E +    T   +  +++L
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 170

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H   ++HRD+K  NIL+   G V
Sbjct: 171 HSHNMIHRDVKAGNILLSEPGLV 193

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 98.6 bits (246), Expect = 3e-24
 Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY 161
               +    D E    +G G  G+V++++ +      +  + A+K MR+     K     
Sbjct: 17  GQRYQAEINDLENLGEMGSGTCGQVWKMRFRK-----TGHVIAVKQMRRS--GNKEENKR 69

Query: 162 MKAERDILTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
           +  + D++ K    P+IVQ   +F T + +++ ++ +           QG   E      
Sbjct: 70  ILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKM 129

Query: 221 TAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
           T  IV A+ +L  K G++HRD+KP NIL+D  G +
Sbjct: 130 TVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQI 164

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 98.1 bits (245), Expect = 3e-24
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 25/170 (14%)

Query: 95  NDAELEAESERKIGPGD----FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVM-- 148
           +D E+  +    +  GD    +  F  +GQGA G V+           +    A++ M  
Sbjct: 1   SDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDV-----ATGQEVAIRQMNL 55

Query: 149 ----RKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFF 204
               +K+ II          E  ++ +  +P IV    S+    +L+++++++ GG L  
Sbjct: 56  QQQPKKELIIN---------EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT- 105

Query: 205 HLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            +  +    E Q      E + A+  LH   ++HRD+K +NIL+  DG V
Sbjct: 106 DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV 155

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 97.8 bits (244), Expect = 4e-24
 Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 9/144 (6%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +EI   +G GAFGKV++ K K     ++  + A KV+       +  ++    E +IL  
Sbjct: 21  WEIVGELGDGAFGKVYKAKNK-----ETGALAAAKVI---ETKSEEELEDYIVEIEILAT 72

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLF-FHLYRQGIFREDQARFYTAEIVSAVSH 230
             HP+IV+L  ++    KL+++++F  GG +    L       E Q +    +++ A++ 
Sbjct: 73  CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNF 132

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH   I+HRDLK  N+LM  +G +
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLEGDI 156

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 97.4 bits (243), Expect = 6e-24
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 15/166 (9%)

Query: 97  AELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK 156
           +E  +     I   D+E+  V+G GA   V                 A+K +  +    +
Sbjct: 2   SEDSSALPWSINRDDYELQEVIGSGATAVVQ----AAYCA-PKKEKVAIKRINLEKC--Q 54

Query: 157 NHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG---HLFFHLYRQ---- 209
             +D +  E   +++  HP IV    SF  + +L+L++  ++GG    +  H+  +    
Sbjct: 55  TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHK 114

Query: 210 -GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            G+  E        E++  + +LHK G +HRD+K  NIL+  DG V
Sbjct: 115 SGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSV 160

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 94.7 bits (236), Expect = 8e-23
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 13/170 (7%)

Query: 91  LEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRK 150
           +E     ++  E        D +    +G+GA+G V ++  K      S  I A+K +R 
Sbjct: 3   IESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHK-----PSGQIMAVKRIRS 57

Query: 151 DTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFF----H 205
              + +     +  + D++ +    P+IVQ   +       ++ ++ ++     F    +
Sbjct: 58  T--VDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVY 115

Query: 206 LYRQGIFREDQARFYTAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
                +  E+     T   V A++HL     I+HRD+KP NIL+D  G++
Sbjct: 116 SVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNI 165

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 94.0 bits (234), Expect = 1e-22
 Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 14/174 (8%)

Query: 89  QELEHENDAELEAESERKIGPGDFEIFR-VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKV 147
           +  + ++  ELE ++      G F  F   +G+G+F  V+    KG+D   +    A   
Sbjct: 4   RNQQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVY----KGLDTETTV-EVAWCE 58

Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF----QTRSKLYLILDFINGGHLF 203
           + +D  + K+     K E ++L  + HP IV+   S+    + +  + L+ + +  G L 
Sbjct: 59  L-QDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLK 117

Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDS-DGHV 254
            +L R  + +    R +  +I+  +  LH     I+HRDLK +NI +    G V
Sbjct: 118 TYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSV 171

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 94.5 bits (235), Expect = 1e-22
 Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 15/176 (8%)

Query: 87  QIQELEHENDAELEAESERKIG-------PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDS 139
           +++ELE +       E+              DFE    +G G  G VF+V  K      S
Sbjct: 3   KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKP-----S 57

Query: 140 DGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
             + A K++  +  IK    + +  E  +L +   P+IV    +F +  ++ + ++ ++G
Sbjct: 58  GLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115

Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
           G L   L + G   E      +  ++  +++L  K  I+HRD+KP NIL++S G +
Sbjct: 116 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 171

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 94.0 bits (234), Expect = 2e-22
 Identities = 35/174 (20%), Positives = 82/174 (47%), Gaps = 11/174 (6%)

Query: 82  SSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG 141
           S   +Q++        +L+ +S  K     F++   +G+G++G V++   K     ++  
Sbjct: 1   SLETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHK-----ETGQ 55

Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
           I A+K +  ++ +++     +  E  I+ +   P +V+   S+   + L++++++   G 
Sbjct: 56  IVAIKQVPVESDLQE-----IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS 110

Query: 202 LF-FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +      R     ED+        +  + +LH    +HRD+K  NIL++++GH 
Sbjct: 111 VSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHA 164

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 91.6 bits (228), Expect = 8e-22
 Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 24/195 (12%)

Query: 65  HNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFG 124
           H+  H    P   Y + ++  L  Q     +  +++      I   D  I   +G G+FG
Sbjct: 3   HHHHHH---PMSDYDIPTTENLYFQGAM--DGDDMD------IPWCDLNIKEKIGAGSFG 51

Query: 125 KVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF 184
            V + +  G D        A+K++ +     +   ++++ E  I+ ++ HP IV    + 
Sbjct: 52  TVHRAEWHGSD-------VAVKILMEQDFHAERVNEFLR-EVAIMKRLRHPNIVLFMGAV 103

Query: 185 QTRSKLYLILDFINGGHLFFHLYRQGIFRE---DQARFYTAEIVSAVSHLHKCG--IVHR 239
                L ++ ++++ G L+  L++ G   +    +      ++   +++LH     IVHR
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163

Query: 240 DLKPENILMDSDGHV 254
           +LK  N+L+D    V
Sbjct: 164 NLKSPNLLVDKKYTV 178

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 92.3 bits (229), Expect = 1e-21
 Identities = 33/166 (19%), Positives = 66/166 (39%), Gaps = 10/166 (6%)

Query: 93  HENDAELEAESERKIGPGDFEIFRVVGQGA--FGKVFQVKKKGVDDGDSDGIYAMKVMRK 150
           H  +   +  S      G +E+  V+G+G      V   + K      +     ++ +  
Sbjct: 8   HMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKP-----TGEYVTVRRINL 62

Query: 151 DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF--FHLYR 208
           +       V +++ E  +     HP IV  R +F   ++L+++  F+  G        + 
Sbjct: 63  EAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHF 121

Query: 209 QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                E    +    ++ A+ ++H  G VHR +K  +IL+  DG V
Sbjct: 122 MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV 167

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 12/154 (7%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           ++   D E    +G+GA+G V +++        S  I A+K +R    +       +  +
Sbjct: 3   EVKADDLEPIMELGRGAYGVVEKMRHV-----PSGQIMAVKRIRAT--VNSQEQKRLLMD 55

Query: 166 RDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFF---HLYRQGIFREDQARFYT 221
            DI  +    PF V    +      +++ ++ ++     F    + +     ED      
Sbjct: 56  LDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIA 115

Query: 222 AEIVSAVSHLH-KCGIVHRDLKPENILMDSDGHV 254
             IV A+ HLH K  ++HRD+KP N+L+++ G V
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQV 149

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 89.4 bits (222), Expect = 7e-21
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 18/154 (11%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G FE+  +VG G +G+V+    KG     +  + A+KVM     +  +  + +K E ++L
Sbjct: 24  GIFELVELVGNGTYGQVY----KGRHV-KTGQLAAIKVMD----VTGDEEEEIKQEINML 74

Query: 170 TKV-THPFIVQLRYSF------QTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFY 220
            K   H  I     +F          +L+L+++F   G +       +    +E+   + 
Sbjct: 75  KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             EI+  +SHLH+  ++HRD+K +N+L+  +  V
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 88.9 bits (221), Expect = 7e-21
 Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 20/158 (12%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
           S   I   + E+  VVG+GAFG V + K +  D        A+K +  ++  K     ++
Sbjct: 1   SLHMIDYKEIEVEEVVGRGAFGVVCKAKWRAKD-------VAIKQIESESERK----AFI 49

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
             E   L++V HP IV+L  +    + + L++++  GG L+  L+         A    +
Sbjct: 50  V-ELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106

Query: 223 ---EIVSAVSHLHKC---GIVHRDLKPENILMDSDGHV 254
              +    V++LH      ++HRDLKP N+L+ + G V
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 88.5 bits (220), Expect = 8e-21
 Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 11/164 (6%)

Query: 92  EHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD 151
            H +    +A  + +I  G   + + +G G+FG V+    KG   GD     A+K++   
Sbjct: 6   HHHHHGSRDAADDWEIPDGQITVGQRIGSGSFGTVY----KGKWHGD----VAVKMLNVT 57

Query: 152 TIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI 211
               +    + K E  +L K  H  I+     + T  +L ++  +  G  L+ HL+    
Sbjct: 58  APTPQQLQAF-KNEVGVLRKTRHVNILLF-MGYSTAPQLAIVTQWCEGSSLYHHLHASET 115

Query: 212 -FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            F   +      +    + +LH   I+HRDLK  NI +  D  V
Sbjct: 116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTV 159

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 88.2 bits (219), Expect = 1e-20
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 9/153 (5%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
             R   P D     V+G+G FG+  +V  +      +  +  MK + +     +      
Sbjct: 3   PHRIFRPSDLIHGEVLGKGCFGQAIKVTHRE-----TGEVMVMKELIRFD---EETQRTF 54

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYT 221
             E  ++  + HP +++         +L  I ++I GG L   +      +   Q   + 
Sbjct: 55  LKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFA 114

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            +I S +++LH   I+HRDL   N L+  + +V
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNV 147

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 87.6 bits (217), Expect = 4e-20
 Identities = 35/197 (17%), Positives = 57/197 (28%), Gaps = 53/197 (26%)

Query: 111 DFEIFRVVGQGAFGKVFQVK----------KK---------------------------- 132
           DFE  + +G+G FG VF+ K          K+                            
Sbjct: 7   DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66

Query: 133 ------------GVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQL 180
                            + D I+         +   + +D    +   +   +    V  
Sbjct: 67  VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126

Query: 181 RYSFQTRSKLYLILDFINGGHLFFHLYRQGIF---REDQARFYTAEIVSAVSHLHKCGIV 237
                 +  LY+ +      +L   + R+                +I  AV  LH  G++
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLM 186

Query: 238 HRDLKPENILMDSDGHV 254
           HRDLKP NI    D  V
Sbjct: 187 HRDLKPSNIFFTMDDVV 203

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 86.4 bits (214), Expect = 9e-20
 Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 32/172 (18%)

Query: 100 EAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY-AMKVMRKDTIIKKNH 158
            A SE  +   + ++  ++G+G +G V++        G  D    A+KV          +
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYK--------GSLDERPVAVKVF------SFAN 48

Query: 159 VDYMKAERDI--LTKVTHPFIVQL-----RYSFQTRSKLYLILDFINGGHLFFHLYRQGI 211
                 E++I  +  + H  I +      R +   R +  L++++   G L  +L     
Sbjct: 49  RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS 108

Query: 212 FREDQARFYTAEIVSAVSHLH---------KCGIVHRDLKPENILMDSDGHV 254
                 R     +   +++LH         K  I HRDL   N+L+ +DG  
Sbjct: 109 DWVSSCRL-AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 85.1 bits (211), Expect = 2e-19
 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I     EI  ++G+G FG+V+     G   G+     A++++  +   +     + K E 
Sbjct: 30  IPFEQLEIGELIGKGRFGQVY----HGRWHGE----VAIRLIDIERDNEDQLKAF-KREV 80

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIV 225
               +  H  +V    +  +   L +I     G  L+  +    I    ++ R    EIV
Sbjct: 81  MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIV 140

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             + +LH  GI+H+DLK +N+  D +G V
Sbjct: 141 KGMGYLHAKGILHKDLKSKNVFYD-NGKV 168

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 84.3 bits (209), Expect = 3e-19
 Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 28/171 (16%)

Query: 96  DAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY-------AMKVM 148
            +E        +   + E  + +G+G FG V +            G         A+K +
Sbjct: 5   GSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHK------------GRLVKDKSVVAIKSL 52

Query: 149 RKDTIIKKNHVDYM----KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFF 204
                  +  +       + E  I++ + HP IV+L       +   ++++F+  G L+ 
Sbjct: 53  ILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYH 110

Query: 205 HLYRQGIFREDQARFYTA-EIVSAVSHLHKCG--IVHRDLKPENILMDSDG 252
            L  +    +   +     +I   + ++      IVHRDL+  NI + S  
Sbjct: 111 RLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 84.5 bits (210), Expect = 3e-19
 Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 10/146 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI-- 168
            +E    +G+G++G VF+ + +     D+  I A+K   +    + + V    A R+I  
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNR-----DTGQIVAIKKFLES---EDDPVIKKIALREIRM 55

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           L ++ HP +V L   F+ + +L+L+ ++ +   L      Q    E   +  T + + AV
Sbjct: 56  LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAV 115

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
           +  HK   +HRD+KPENIL+     +
Sbjct: 116 NFCHKHNCIHRDVKPENILITKHSVI 141

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 84.3 bits (209), Expect = 4e-19
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 28/158 (17%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI-- 168
           D  +   VG+G +G+V++   +G +        A+K      I           E ++  
Sbjct: 9   DITLLECVGKGRYGEVWRGSWQGEN-------VAVK------IFSSRDEKSWFRETELYN 55

Query: 169 LTKVTHPFIVQL----RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
              + H  I+        S  + ++L+LI  +   G L+ +L    +      R     I
Sbjct: 56  TVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-VLSI 114

Query: 225 VSAVSHLH--------KCGIVHRDLKPENILMDSDGHV 254
            S ++HLH        K  I HRDLK +NIL+  +G  
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC 152

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 83.0 bits (206), Expect = 9e-19
 Identities = 33/158 (20%), Positives = 72/158 (45%), Gaps = 33/158 (20%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--- 167
           +F+    +G+G +G V++ +     +  +  + A+K +R            +  E +   
Sbjct: 4   NFQKVEKIGEGTYGVVYKAR-----NKLTGEVVALKKIR------------LDTETEGVP 46

Query: 168 --------ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH---LFFHLYRQGIFREDQ 216
                   +L ++ HP IV+L     T +KLYL+ +F++       F             
Sbjct: 47  STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPL 104

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            + Y  +++  ++  H   ++HRDLKP+N+L++++G +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI 142

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 84.0 bits (208), Expect = 1e-18
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 21/152 (13%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +   +V+G G+FG V+Q K       DS  + A+K + +D         +   E  I+ K
Sbjct: 56  YTDTKVIGNGSFGVVYQAK-----LCDSGELVAIKKVLQDK-------RFKNRELQIMRK 103

Query: 172 VTHPFIVQLRYSFQTRS------KLYLILDFINGG-HLFFHLYRQG--IFREDQARFYTA 222
           + H  IV+LRY F +         L L+LD++    +     Y +          + Y  
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++  +++++H  GI HRD+KP+N+L+D D  V
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 84.5 bits (209), Expect = 1e-18
 Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 26/161 (16%)

Query: 106 KIGPGD-----FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD 160
           ++ PGD     +E+   +  G  G ++      +D   +     +K +           +
Sbjct: 71  QLNPGDIVAGQYEVKGCIAHGGLGWIY----LALDRNVNGRPVVLKGLVHS-----GDAE 121

Query: 161 YMK---AERDILTKVTHPFIVQLRYSF------QTRSKLYLILDFINGGHLFFHLYRQGI 211
                 AER  L +V HP IVQ+ ++F            Y++++++ G  L     +   
Sbjct: 122 AQAMAMAERQFLAEVVHPSIVQI-FNFVEHTDRHGDPVGYIVMEYVGGQSL--KRSKGQK 178

Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
               +A  Y  EI+ A+S+LH  G+V+ DLKPENI++  + 
Sbjct: 179 LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ 219

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 82.7 bits (205), Expect = 2e-18
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 10/146 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI-- 168
            +E   +VG+G++G V + + K     D+  I A+K   +      + +    A R+I  
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNK-----DTGRIVAIKKFLES---DDDKMVKKIAMREIKL 77

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
           L ++ H  +V L    + + + YL+ +F++   L               + Y  +I++ +
Sbjct: 78  LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI 137

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
              H   I+HRD+KPENIL+   G V
Sbjct: 138 GFCHSHNIIHRDIKPENILVSQSGVV 163

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 81.8 bits (203), Expect = 3e-18
 Identities = 30/158 (18%), Positives = 70/158 (44%), Gaps = 35/158 (22%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--- 167
            +     +G+G +G V++ +            +A+K +R            ++ E +   
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN------YGETFALKKIR------------LEKEDEGIP 44

Query: 168 --------ILTKVTHPFIVQLRYSFQTRSKLYLILDFIN---GGHLFFHLYRQGIFREDQ 216
                   IL ++ H  IV+L     T+ +L L+ + ++      L      +G      
Sbjct: 45  STTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC---EGGLESVT 101

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           A+ +  ++++ +++ H   ++HRDLKP+N+L++ +G +
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 82.1 bits (203), Expect = 3e-18
 Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 31/184 (16%)

Query: 88  IQELEHENDAELEAESER-KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMK 146
           +    H + + ++  +E         ++  V  +G FG V++ +             A+K
Sbjct: 1   MGHHHHHHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEY-------VAVK 53

Query: 147 VMRKDTIIKKNHVDYMKAERDI--LTKVTHPFIVQL----RYSFQTRSKLYLILDFINGG 200
           +               + E ++  L  + H  I+Q     +        L+LI  F   G
Sbjct: 54  IF------PIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107

Query: 201 HLFFHLYRQGIFREDQARFYTAEIVSAVSHLH----------KCGIVHRDLKPENILMDS 250
            L   L    +   +        +   +++LH          K  I HRD+K +N+L+ +
Sbjct: 108 SLSDFLKANVVSWNELCHIAE-TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN 166

Query: 251 DGHV 254
           +   
Sbjct: 167 NLTA 170

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 82.1 bits (203), Expect = 3e-18
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 28/162 (17%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
                 ++ + +G+G +G+V+  K +G          A+K      +           E 
Sbjct: 34  TIAKQIQMVKQIGKGRYGEVWMGKWRGEK-------VAVK------VFFTTEEASWFRET 80

Query: 167 DI--LTKVTHPFIVQL----RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
           +I     + H  I+           + ++LYLI D+   G L+ +L    +  +   +  
Sbjct: 81  EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKL- 139

Query: 221 TAEIVSAVSHLH--------KCGIVHRDLKPENILMDSDGHV 254
               VS + HLH        K  I HRDLK +NIL+  +G  
Sbjct: 140 AYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 82.1 bits (203), Expect = 4e-18
 Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
                  +   +G+G FG+V++ K +G +        A+K      I           E 
Sbjct: 39  TIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVK------IFSSREERSWFREA 85

Query: 167 DI--LTKVTHPFIVQL----RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
           +I     + H  I+           T ++L+L+ D+   G LF +L R  +  E   +  
Sbjct: 86  EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL- 144

Query: 221 TAEIVSAVSHLH--------KCGIVHRDLKPENILMDSDGHV 254
                S ++HLH        K  I HRDLK +NIL+  +G  
Sbjct: 145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 82.4 bits (204), Expect = 4e-18
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 22/152 (14%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +   +V+G G+FG VFQ K             A+K + +D         +   E  I+  
Sbjct: 42  YTNCKVIGNGSFGVVFQAKLV------ESDEVAIKKVLQDK-------RFKNRELQIMRI 88

Query: 172 VTHPFIVQLRYSFQTRS------KLYLILDFING---GHLFFHLYRQGIFREDQARFYTA 222
           V HP +V L+  F +         L L+L+++          +   +        + Y  
Sbjct: 89  VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMY 148

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +++ +++++H  GI HRD+KP+N+L+D    V
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV 180

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 81.1 bits (201), Expect = 6e-18
 Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 26/159 (16%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD-------TIIKKNHVDYMK 163
            F+    +G G +  V++       +  +    A+K ++ D       T I+        
Sbjct: 6   QFKQLEKLGNGTYATVYKGL-----NKTTGVYVALKEVKLDSEEGTPSTAIR-------- 52

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFIN---GGHL--FFHLYRQGIFREDQAR 218
            E  ++ ++ H  IV+L     T +KL L+ +F++     ++              +  +
Sbjct: 53  -EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK 111

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
           ++  +++  ++  H+  I+HRDLKP+N+L++  G +   
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLG 150

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 80.7 bits (200), Expect = 7e-18
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 35/158 (22%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--- 167
            ++    VG+G +G V++ K           I A+K +R            + AE +   
Sbjct: 22  KYQKLEKVGEGTYGVVYKAKDS------QGRIVALKRIR------------LDAEDEGIP 63

Query: 168 --------ILTKVTHPFIVQLRYSFQTRSKLYLILDFIN---GGHLFFHLYRQGIFREDQ 216
                   +L ++ HP IV L     +   L L+ +F+       L  +   +   ++ Q
Sbjct: 64  STAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN---KTGLQDSQ 120

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            + Y  +++  V+H H+  I+HRDLKP+N+L++SDG +
Sbjct: 121 IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGAL 158

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 80.3 bits (199), Expect = 8e-18
 Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 34/158 (21%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--- 167
            +E    +G+G +G VF+ K     + ++  I A+K +R            +  + +   
Sbjct: 3   KYEKLEKIGEGTYGTVFKAK-----NRETHEIVALKRVR------------LDDDDEGVP 45

Query: 168 --------ILTKVTHPFIVQLRYSFQTRSKLYLILDFIN---GGHLFFHLYRQGIFREDQ 216
                   +L ++ H  IV+L     +  KL L+ +F +     +        G    + 
Sbjct: 46  SSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC---NGDLDPEI 102

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            + +  +++  +   H   ++HRDLKP+N+L++ +G +
Sbjct: 103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGEL 140

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 80.7 bits (200), Expect = 1e-17
 Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 22/157 (14%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI-- 168
            +E    +G+GA+GKVF    K  D  +     A+K +R  T   +  +  +   R++  
Sbjct: 12  QYECVAEIGEGAYGKVF----KARDLKNGGRFVALKRVRVQT--GEEGMP-LSTIREVAV 64

Query: 169 ---LTKVTHPFIVQLR-----YSFQTRSKLYLILDFINGGH---LFFHLYRQGIFREDQA 217
              L    HP +V+L            +KL L+ + ++       +     +     +  
Sbjct: 65  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD--QDLTTYLDKVPEPGVPTETI 122

Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +    +++  +  LH   +VHRDLKP+NIL+ S G +
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQI 159

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 80.3 bits (199), Expect = 1e-17
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 23/154 (14%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK------A 164
            +E    +G+G F  V++ + K     +++ I A+K   K   IK  H    K      A
Sbjct: 11  RYEKLDFLGEGQFATVYKARDK-----NTNQIVAIK---K---IKLGHRSEAKDGINRTA 59

Query: 165 ERDI--LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGI-FREDQARFY 220
            R+I  L +++HP I+ L  +F  +S + L+ DF+     L   +    +       + Y
Sbjct: 60  LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAY 117

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
               +  + +LH+  I+HRDLKP N+L+D +G +
Sbjct: 118 MLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVL 151

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 26/154 (16%), Positives = 57/154 (37%), Gaps = 14/154 (9%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I          + +   G++++ + +G D         +KV++      +   D+ + E 
Sbjct: 7   IDFKQLNFLTKLNENHSGELWKGRWQGND-------IVVKVLKVRDWSTRKSRDFNE-EC 58

Query: 167 DILTKVTHPFIVQLR--YSFQTRSKLYLILDFINGGHLFFHLYRQGIFRED--QARFYTA 222
             L   +HP ++ +             LI  ++  G L+  L+    F  D  QA  +  
Sbjct: 59  PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118

Query: 223 EIVSAVSHLHKCG--IVHRDLKPENILMDSDGHV 254
           ++   ++ LH     I    L   ++++D D   
Sbjct: 119 DMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA 152

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 12/151 (7%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-IKKNHVDYMKAE 165
           I   +  +  ++G G FGKV++    G +        A+K  R D        ++ ++ E
Sbjct: 4   IDFAELTLEEIIGIGGFGKVYRAFWIGDE-------VAVKAARHDPDEDISQTIENVRQE 56

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +   + HP I+ LR        L L+++F  GG L   L  + I   D    +  +I 
Sbjct: 57  AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI-PPDILVNWAVQIA 115

Query: 226 SAVSHLHKCG---IVHRDLKPENILMDSDGH 253
             +++LH      I+HRDLK  NIL+     
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVE 146

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 20/157 (12%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI-- 168
            +E    +G GA+G V++ +     D  S    A+K +R            +   R++  
Sbjct: 10  RYEPVAEIGVGAYGTVYKAR-----DPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64

Query: 169 ---LTKVTHPFIVQLR-----YSFQTRSKLYLILDFINGGH---LFFHLYRQGIFREDQA 217
              L    HP +V+L             K+ L+ + ++       +           +  
Sbjct: 65  LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD--QDLRTYLDKAPPPGLPAETI 122

Query: 218 RFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +    + +  +  LH   IVHRDLKPENIL+ S G V
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTV 159

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 79.2 bits (196), Expect = 3e-17
 Identities = 26/154 (16%), Positives = 65/154 (42%), Gaps = 31/154 (20%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--- 167
            +     +G+G +G+V++          ++   A+K +R            ++ E +   
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDT-----VTNETVAIKRIR------------LEHEEEGVP 77

Query: 168 --------ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGIFREDQAR 218
                   +L ++ H  I++L+       +L+LI ++    + L  ++ +         +
Sbjct: 78  GTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE--NDLKKYMDKNPDVSMRVIK 135

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
            +  ++++ V+  H    +HRDLKP+N+L+    
Sbjct: 136 SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSD 169

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 77.7 bits (192), Expect = 8e-17
 Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 5/145 (3%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             ++I   +G G    V+  +     D   +   A+K +      K+  +   + E    
Sbjct: 11  ERYKIVDKLGGGGMSTVYLAE-----DTILNIKVAIKAIFIPPREKEETLKRFEREVHNS 65

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           ++++H  IV +    +     YL++++I G  L  ++   G    D A  +T +I+  + 
Sbjct: 66  SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK 125

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           H H   IVHRD+KP+NIL+DS+  +
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTL 150

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 77.7 bits (192), Expect = 9e-17
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G + + R+VG+G  G V++ +     D   + I A+K+M +           M+ E    
Sbjct: 34  GPYRLRRLVGRGGMGDVYEAE-----DTVRERIVALKLMSETLSSDPVFRTRMQREARTA 88

Query: 170 TKVTHPFIVQLRYSF-QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
            ++  P +V + + F +   +LY+ +  ING  L   L RQG     +A     +I SA+
Sbjct: 89  GRLQEPHVVPI-HDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSAL 147

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
              H  G  HRD+KPENIL+ +D   
Sbjct: 148 DAAHAAGATHRDVKPENILVSADDFA 173

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 27/154 (17%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKD-------TIIKKNHVDYMK 163
            +     +G+G +  V++ K K      +D + A+K +R +       T I+        
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSK-----LTDNLVALKEIRLEHEEGAPCTAIR-------- 49

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSKLYLILDFIN---GGHLFFHLYRQGIFREDQARFY 220
            E  +L  + H  IV L     T   L L+ ++++     +L        I      + +
Sbjct: 50  -EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYL---DDCGNIINMHNVKLF 105

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +++  +++ H+  ++HRDLKP+N+L++  G +
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGEL 139

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 76.0 bits (187), Expect = 6e-16
 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 22/147 (14%)

Query: 118 VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHP 175
           VG+G +G V++ K+K   DG  D  YA+K +    I        M A R+I  L ++ HP
Sbjct: 29  VGRGTYGHVYKAKRK---DGKDDKDYALKQIEGTGIS-------MSACREIALLRELKHP 78

Query: 176 FIVQLR--YSFQTRSKLYLILDF--------INGGHLFFHLYRQGIFREDQARFYTAEIV 225
            ++ L+  +      K++L+ D+        I          +         +    +I+
Sbjct: 79  NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDG 252
             + +LH   ++HRDLKP NIL+  +G
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEG 165

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 75.3 bits (186), Expect = 9e-16
 Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 40/165 (24%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD--- 167
            +E    +GQG FG+VF+ +        +    A+K +             M+ E++   
Sbjct: 18  KYEKLAKIGQGTFGEVFKAR-----HRKTGQKVALKKVL------------MENEKEGFP 60

Query: 168 --------ILTKVTHPFIVQLR--------YSFQTRSKLYLILDFINGGH-LFFHLYRQG 210
                   IL  + H  +V L            + +  +YL+ DF    H L   L    
Sbjct: 61  ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--HDLAGLLSNVL 118

Query: 211 I-FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           + F   + +     +++ + ++H+  I+HRD+K  N+L+  DG +
Sbjct: 119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL 163

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             +E+  ++G G   +V   +     D       A+KV+R D     +     + E    
Sbjct: 12  DRYELGEILGFGGMSEVHLAR-----DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA 66

Query: 170 TKVTHPFIVQL----RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             + HP IV +              Y+++++++G  L   ++ +G     +A    A+  
Sbjct: 67  AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            A++  H+ GI+HRD+KP NI++ +   V
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAV 155

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 37/172 (21%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA---ERDI 168
           +EI   +G+GAFGKV +      D        A+K+++       N   Y +A   E  +
Sbjct: 16  YEIVDTLGEGAFGKVVECI----DHKAGGRHVAVKIVK-------NVDRYCEAARSEIQV 64

Query: 169 LTKV--------THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-------RQGIFR 213
           L  +             VQ+   F+    + ++ +      L    Y           FR
Sbjct: 65  LEHLNTTDPNSTFR--CVQMLEWFEHHGHICIVFEL-----LGLSTYDFIKENGFLP-FR 116

Query: 214 EDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
            D  R    +I  +V+ LH   + H DLKPENIL     +  A +     ++
Sbjct: 117 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 73.9 bits (182), Expect = 3e-15
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 37/171 (21%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA---ERDI 168
           F + R +G G FG+V   +       D+   YA+KV+R       N   Y ++   E DI
Sbjct: 37  FLVIRKMGDGTFGRVLLCQ-----HIDNKKYYAVKVVR-------NIKKYTRSAKIEADI 84

Query: 169 LTKV-------THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-------RQGIFRE 214
           L K+        +  IV+    F     + LI +      L   LY         G F  
Sbjct: 85  LKKIQNDDINNNN--IVKYHGKFMYYDHMCLIFEP-----LGPSLYEIITRNNYNG-FHI 136

Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ 265
           +  + Y  EI+ A+++L K  + H DLKPENIL+D      +  ++     
Sbjct: 137 EDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTD 187

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 73.5 bits (181), Expect = 3e-15
 Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 49/167 (29%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA---ERDI 168
           +EI   +G+G FGKV +      D        A+K++R       N   Y +A   E ++
Sbjct: 21  YEIVGNLGEGTFGKVVECL----DHARGKSQVALKIIR-------NVGKYREAARLEINV 69

Query: 169 LTKV--------THPFIVQLRYSFQTRSKLYLILDFINGGHLF----------FHLYRQG 210
           L K+             V +   F               GH+           F   ++ 
Sbjct: 70  LKKIKEKDKENKFL--CVLMSDWFNFH------------GHMCIAFELLGKNTFEFLKEN 115

Query: 211 IFR---EDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            F+       R    ++  A+  LH+  + H DLKPENIL  +    
Sbjct: 116 NFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE 162

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 21/155 (13%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F++ R+ GQG FG V   K     +  +    A+K + +D   +   +  M+     L  
Sbjct: 25  FQVERMAGQGTFGTVQLGK-----EKSTGMSVAIKKVIQDPRFRNRELQIMQ----DLAV 75

Query: 172 VTHPFIVQLRYSFQTRSK-------LYLILDFING---GHLFFHLYRQGIFREDQARFYT 221
           + HP IVQL+  F T  +       L ++++++          +  RQ        + + 
Sbjct: 76  LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFL 135

Query: 222 AEIVSAVSHLHKC--GIVHRDLKPENILMDSDGHV 254
            +++ ++  LH     + HRD+KP N+L++     
Sbjct: 136 FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT 170

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 71.3 bits (175), Expect = 3e-14
 Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 28/155 (18%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA---ERDI 168
           +E+ +V+G+G+FG+V +       D       A+K++R       N   + +    E  I
Sbjct: 99  YEVLKVIGKGSFGQVVKAY-----DHKVHQHVALKMVR-------NEKRFHRQAAEEIRI 146

Query: 169 LTKV-------THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFR---EDQAR 218
           L  +       T   ++ +  +F  R+ + +   F       + L ++  F+       R
Sbjct: 147 LEHLRKQDKDNTM-NVIHMLENFTFRNHICMT--FELLSMNLYELIKKNKFQGFSLPLVR 203

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
            +   I+  +  LHK  I+H DLKPENIL+   G 
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR 238

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 70.4 bits (173), Expect = 4e-14
 Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 21/148 (14%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
             D+++ R +G+G + +VF+       +  ++    +K+++         V   K +R+I
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAI-----NITNNEKVVVKILKP--------VKKKKIKREI 81

Query: 169 --LTKVT-HPFIVQLRYSFQTRS--KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
             L  +   P I+ L    +        L+ + +N          Q    +   RFY  E
Sbjct: 82  KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQ-TLTDYDIRFYMYE 138

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSD 251
           I+ A+ + H  GI+HRD+KP N+++D +
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDHE 166

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 69.4 bits (170), Expect = 7e-14
 Identities = 23/148 (15%), Positives = 53/148 (35%), Gaps = 7/148 (4%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
           G + +    G     + +Q       D   D   A+  +    ++  + +    +    L
Sbjct: 31  GRYRLLIFHGGVPPLQFWQAL-----DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRL 85

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           +++  P + ++     TR+   ++ ++I GG L   +          A      + +A  
Sbjct: 86  SRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQ-EVADTSP-SPVGAIRAMQSLAAAAD 143

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
             H+ G+      P  + +  DG V+ A
Sbjct: 144 AAHRAGVALSIDHPSRVRVSIDGDVVLA 171

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 69.6 bits (171), Expect = 7e-14
 Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 11/154 (7%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGV--DDGDSDGIY-AMKVMRKDTIIKKNHVDY 161
           R +   +F+  +V+G GAFG V+    KG+   +G+   I  A+K +R+ T   K + + 
Sbjct: 10  RILKETEFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATS-PKANKEI 64

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFY 220
           +  E  ++  V +P + +L       S + LI   +  G L  ++   +          +
Sbjct: 65  LD-EAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +I   +++L    +VHRDL   N+L+ +  HV
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 156

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 26/156 (16%), Positives = 62/156 (39%), Gaps = 8/156 (5%)

Query: 101 AESERKIGPGDFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIY-AMKVMRKDTIIKKNH 158
              E  +      +  + +G G FG V     KG           A+K+++ +       
Sbjct: 7   RPKEVYLDRKLLTLEDKELGSGNFGTVK----KGYYQMKKVVKTVAVKILKNEANDPALK 62

Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQAR 218
            + +  E +++ ++ +P+IV++           L+++    G L  +L +    ++    
Sbjct: 63  DELLA-EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 120

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
               ++   + +L +   VHRDL   N+L+ +  + 
Sbjct: 121 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 156

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 68.7 bits (168), Expect = 2e-13
 Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 10/190 (5%)

Query: 68  SHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVF 127
           ++   G        S      + ++ E+   + +  + +I     E+ R +G+G FG V 
Sbjct: 348 NNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVH 407

Query: 128 QVKKKGVDDGDSDGIY--AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ 185
               +G+     +     A+K  +  T        +++ E   + +  HP IV+L     
Sbjct: 408 ----QGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQ-EALTMRQFDHPHIVKL-IGVI 460

Query: 186 TRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPE 244
           T + +++I++    G L   L  R+          Y  ++ +A+++L     VHRD+   
Sbjct: 461 TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 520

Query: 245 NILMDSDGHV 254
           N+L+ S+  V
Sbjct: 521 NVLVSSNDCV 530

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 38/182 (20%), Positives = 81/182 (44%), Gaps = 9/182 (4%)

Query: 77  RYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDD 136
            +        +    +    +  E     +      +  + +G+G FG V   +   + D
Sbjct: 8   HHHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQD 67

Query: 137 GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLR---YSFQTRSKLYLI 193
              + + A+K ++  T  +++  D+ + E +IL  + H  IV+ +   YS   R+ L LI
Sbjct: 68  NTGEVV-AVKKLQHST--EEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRN-LKLI 122

Query: 194 LDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           ++++  G L  +L + +      +   YT++I   + +L     +HRDL   NIL++++ 
Sbjct: 123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN 182

Query: 253 HV 254
            V
Sbjct: 183 RV 184

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 8/154 (5%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY--AMKVMRKDTIIKKNHVDY 161
              IG  D  +   +G G+FG V     +G  D  S      A+K ++ D + +   +D 
Sbjct: 12  TCLIGEKDLRLLEKLGDGSFGVVR----RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFY 220
              E + +  + H  +++L Y       + ++ +    G L   L   QG F       Y
Sbjct: 68  FIREVNAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             ++   + +L     +HRDL   N+L+ +   V
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV 160

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 101 AESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD 160
                +      +  + +G+G FG V   +   + D   + + A+K ++  T  +++  D
Sbjct: 1   GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVV-AVKKLQHST--EEHLRD 57

Query: 161 YMKAERDILTKVTHPFIVQLR---YSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQ 216
           + + E +IL  + H  IV+ +   YS   R+ L LI++++  G L  +L + +      +
Sbjct: 58  FER-EIEILKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIK 115

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              YT++I   + +L     +HRDL   NIL++++  V
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 153

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 66.9 bits (164), Expect = 5e-13
 Identities = 43/197 (21%), Positives = 75/197 (38%), Gaps = 13/197 (6%)

Query: 64  IHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEA--ESERKIGPGDFEIFRVVGQG 121
           +H+  H   G    Y        Q     H  +    A     R+I      I +++G G
Sbjct: 1   MHHHHHHSSGRENLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSG 60

Query: 122 AFGKVFQVKKKGVDDGDSDGIY--AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQ 179
             G+V      G            A+K ++     ++   D++  E  I+ +  HP I++
Sbjct: 61  DSGEVC----YGRLRVPGQRDVPVAIKALKAGYT-ERQRRDFLS-EASIMGQFDHPNIIR 114

Query: 180 LRYSFQTRSK-LYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEIVSAVSHLHKCGIV 237
           L     TR +   ++ +++  G L   L    G F   Q       + + + +L   G V
Sbjct: 115 L-EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173

Query: 238 HRDLKPENILMDSDGHV 254
           HRDL   N+L+DS+   
Sbjct: 174 HRDLAARNVLVDSNLVC 190

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 67.0 bits (164), Expect = 6e-13
 Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 11/154 (7%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGV--DDGDSDGIY-AMKVMRKDTIIKKNHVDY 161
           R +   +F+  +V+G GAFG V+    KG+   +G+   I  A+K +R+ T   K + + 
Sbjct: 10  RILKETEFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATS-PKANKEI 64

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFY 220
           +  E  ++  V +P + +L       S + LI   +  G L  ++   +          +
Sbjct: 65  LD-EAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +I   +++L    +VHRDL   N+L+ +  HV
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 156

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 67.0 bits (164), Expect = 6e-13
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 48/170 (28%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA---ERDI 168
           + + R +G G F  V+  K     D  ++   AMK++R           Y +A   E  +
Sbjct: 21  YILVRKLGWGHFSTVWLAK-----DMVNNTHVAMKIVR-------GDKVYTEAAEDEIKL 68

Query: 169 LTKVT-----------HPFIVQLRYSFQTRSKLYLILDFINGGHL-------------FF 204
           L +V               I++L   F  +          NG H+               
Sbjct: 69  LQRVNDADNTKEDSMGANHILKLLDHFNHKGP--------NGVHVVMVFEVLGENLLALI 120

Query: 205 HLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGH 253
             Y          +  + +++  + ++H+ CGI+H D+KPEN+LM+    
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 170

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 66.7 bits (163), Expect = 1e-12
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 53/184 (28%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           + + + +G G+FG V +V      D +S   +A+K   K     +    Y   E DI+  
Sbjct: 9   YSLGKTLGTGSFGIVCEVF-----DIESGKRFALK---KVLQDPR----YKNRELDIMKV 56

Query: 172 VTHPFIVQLRYSFQTRSK--------------------------------------LYLI 193
           + H  I++L   F T                                         L +I
Sbjct: 57  LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116

Query: 194 LDFINGG-HLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS 250
           ++++    H     + +       +    Y  ++  AV  +H  GI HRD+KP+N+L++S
Sbjct: 117 MEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176

Query: 251 DGHV 254
             + 
Sbjct: 177 KDNT 180

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 10/154 (6%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY--AMKVMRKDTIIKKNHVDY 161
           + +I     E+ R +G+G FG V     +G+     +     A+K  +  T        +
Sbjct: 9   DYEIQRERIELGRCIGEGQFGDVH----QGIYMSPENPALAVAIKTCKNCTS-DSVREKF 63

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFY 220
           ++ E   + +  HP IV+L     T + +++I++    G L   L  R+          Y
Sbjct: 64  LQ-EALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY 121

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             ++ +A+++L     VHRD+   N+L+ S+  V
Sbjct: 122 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV 155

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY---AMKVMRKDTIIKKNHVDYMKAERD 167
             +  R +G+G FGKV         D  +DG     A+K ++ D    ++   + + E D
Sbjct: 32  YLKKIRDLGEGHFGKVS----LYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQ-EID 85

Query: 168 ILTKVTHPFIVQLR--YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
           IL  + H  I++ +        + L L+++++  G L  +L R  I       F   +I 
Sbjct: 86  ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF-AQQIC 144

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +++LH    +HRDL   N+L+D+D  V
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLV 173

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 16/170 (9%)

Query: 93  HENDAELEAESERK-IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY---AMKVM 148
           H + A+L A  +         +    +G+G FG V         D   D      A+K +
Sbjct: 5   HHHHAQLYACQDPTIFEERHLKYISQLGKGNFGSVE----LCRYDPLGDNTGALVAVKQL 60

Query: 149 RKDTIIKKNHVDYMKAERDILTKVTHPFIVQLR---YSFQTRSKLYLILDFINGGHLFFH 205
           +     ++   D+ + E  IL  +   FIV+ R   Y    +S L L+++++  G L   
Sbjct: 61  QHSGPDQQR--DFQR-EIQILKALHSDFIVKYRGVSYGPGRQS-LRLVMEYLPSGCLRDF 116

Query: 206 LYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           L R +      +   Y+++I   + +L     VHRDL   NIL++S+ HV
Sbjct: 117 LQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 166

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 11/154 (7%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGV--DDGDSDGIY-AMKVMRKDTIIKKNHVDY 161
           R     +    +V+G G FG V     KGV   +G+S  I   +KV+   +  +++    
Sbjct: 8   RIFKETELRKLKVLGSGVFGTVH----KGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAV 62

Query: 162 MKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFY 220
                  +  + H  IV+L       S L L+  ++  G L  H+   +G         +
Sbjct: 63  TD-HMLAIGSLDHAHIVRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 120

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +I   + +L + G+VHR+L   N+L+ S   V
Sbjct: 121 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQV 154

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 65.1 bits (159), Expect = 3e-12
 Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 94  ENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI 153
           E+  +   E  +++   +  I +VVG G FG+V   + K     +     A+K ++    
Sbjct: 29  EDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS--VAIKTLKVGYT 86

Query: 154 IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHL-YRQGI 211
            +K   D++  E  I+ +  HP I++L     T+SK + ++ +++  G L   L      
Sbjct: 87  -EKQRRDFLG-EASIMGQFDHPNIIRL-EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

Query: 212 FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           F   Q       I S + +L   G VHRDL   NIL++S+   
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVC 186

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 64.3 bits (157), Expect = 4e-12
 Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 12/150 (8%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY---AMKVMRKDTIIKKNHVDYMKAERD 167
             +  R +G+G FGKV         D + D      A+K ++ ++    +  D  K E +
Sbjct: 22  FLKRIRDLGEGHFGKVE----LCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKK-EIE 75

Query: 168 ILTKVTHPFIVQLR--YSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEI 224
           IL  + H  IV+ +   +    + + LI++F+  G L  +L + +      Q   Y  +I
Sbjct: 76  ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 135

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              + +L     VHRDL   N+L++S+  V
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQV 165

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 64.7 bits (158), Expect = 4e-12
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 12/158 (7%)

Query: 102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGV---DDGDSDGIYAMKVMRKDTIIKKNH 158
           +   +I P      +V+G G FG+V+    KG+     G  +   A+K ++     +K  
Sbjct: 36  KFTTEIHPSCVTRQKVIGAGEFGEVY----KGMLKTSSGKKEVPVAIKTLKAGYT-EKQR 90

Query: 159 VDYMKAERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHL-YRQGIFREDQ 216
           VD++  E  I+ + +H  I++L     ++ K + +I +++  G L   L  + G F   Q
Sbjct: 91  VDFLG-EAGIMGQFSHHNIIRL-EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ 148

Query: 217 ARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                  I + + +L     VHRDL   NIL++S+   
Sbjct: 149 LVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVC 186

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 64.7 bits (158), Expect = 5e-12
 Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 41/182 (22%)

Query: 95  NDAELEAESERKIGPGD-----FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR 149
           ND   +   +  +  G+     +EI  ++G+G+FG+V +       D       A+K+++
Sbjct: 34  NDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAY-----DRVEQEWVAIKIIK 88

Query: 150 KDTIIKKNHVDYMKA---ERDILTKVTHP------FIVQLRYSFQTRSKLYLILDFINGG 200
                  N   ++     E  +L  +         +IV L+  F  R+ L L+ +     
Sbjct: 89  -------NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE----- 136

Query: 201 HLFFHLY-------RQGIFREDQARFYTAEIVSAVSHLH--KCGIVHRDLKPENILMDSD 251
            L ++LY        +G    +  R +  ++ +A+  L   +  I+H DLKPENIL+ + 
Sbjct: 137 MLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP 195

Query: 252 GH 253
             
Sbjct: 196 KR 197

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 63.0 bits (154), Expect = 9e-12
 Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 13/150 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I P +    + +G G FG V        D        A+K +R+  + ++   D+++ E 
Sbjct: 5   IDPSELTFVQEIGSGQFGLVHLGYWLNKDK------VAIKTIREGAMSEE---DFIE-EA 54

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEI 224
           +++ K++HP +VQL Y        + L+ +F+  G L  +L  ++G+F  +       ++
Sbjct: 55  EVMMKLSHPKLVQL-YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 113

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              +++L +  ++HRDL   N L+  +  +
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVI 143

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 63.4 bits (153), Expect = 1e-11
 Identities = 32/200 (16%), Positives = 62/200 (31%), Gaps = 55/200 (27%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
             +    +G+G FG+VFQ               A+K++  +     N   + K   +IL 
Sbjct: 21  KLQRCEKIGEGVFGEVFQTIADH-------TPVAIKIIAIEGPDLVN-GSHQKTFEEILP 72

Query: 171 KVT---------------HP--------FIVQLRY----------------------SFQ 185
           ++                            VQ  Y                       F 
Sbjct: 73  EIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFF 132

Query: 186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPE 244
              +L+++L+F  GG       R  +     A+    ++ ++++         HRDL   
Sbjct: 133 KDDQLFIVLEFEFGGIDLEQ-MRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWG 191

Query: 245 NILMDSDGHVMAAHSLNSHN 264
           N+L+         ++LN  +
Sbjct: 192 NVLLKKTSLKKLHYTLNGKS 211

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 62.6 bits (153), Expect = 1e-11
 Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 10/151 (6%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY--AMKVMRKDTIIKKNHVDYMKA 164
           I   D  + R++G+G FG+V+    +GV           A+K  +KD     N   +M  
Sbjct: 9   IAREDVVLNRILGEGFFGEVY----EGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMS- 62

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFYTAE 223
           E  I+  + HP IV+L          ++I++    G L  +L   +   +      Y+ +
Sbjct: 63  EAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ 121

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           I  A+++L     VHRD+   NIL+ S   V
Sbjct: 122 ICKAMAYLESINCVHRDIAVRNILVASPECV 152

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 63.0 bits (153), Expect = 2e-11
 Identities = 43/200 (21%), Positives = 73/200 (36%), Gaps = 50/200 (25%)

Query: 85  PLQIQELEHENDAELEAESERKIG------PGD-----FEIFRVVGQGAFGKVFQVKKKG 133
           P Q +E+   +D E E  ++   G       GD     + + R +G G F  V+      
Sbjct: 1   PEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSW--- 57

Query: 134 VDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-----THP---FIVQLRYSFQ 185
             D       AMKV++      +++ +    E  +L  V       P    +VQL   F+
Sbjct: 58  --DIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111

Query: 186 TRSKLYLILDFINGGHL-------------FFHLYRQGIFREDQARFYTAEIVSAVSHLH 232
                       NG H+             +              +    +++  + +LH
Sbjct: 112 ISGV--------NGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH 163

Query: 233 -KCGIVHRDLKPENILMDSD 251
            KC I+H D+KPENIL+  +
Sbjct: 164 TKCRIIHTDIKPENILLSVN 183

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 13/156 (8%)

Query: 101 AESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVD 160
            +   +I     ++ + +G G FG+V+                A+K M+  ++  +    
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK------VAVKTMKPGSMSVE---A 229

Query: 161 YMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQAR 218
           ++  E +++  + H  +V+L ++  T+  +Y+I +F+  G L  F            +  
Sbjct: 230 FLA-EANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 287

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            ++A+I   ++ + +   +HRDL+  NIL+ +    
Sbjct: 288 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVC 323

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 62.5 bits (152), Expect = 2e-11
 Identities = 45/212 (21%), Positives = 83/212 (39%), Gaps = 26/212 (12%)

Query: 50  SPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGP 109
           S  + +A   +    H  S S      R    SS P           +     S+ +I  
Sbjct: 3   SHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTA---------SMPRPHSDWQIPD 53

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI- 168
             +EI  ++G G++G V +       D     + A+K   K   + ++ +D  +  R+I 
Sbjct: 54  -RYEIRHLIGTGSYGHVCEAY-----DKLEKRVVAIK---KILRVFEDLIDCKRILREIA 104

Query: 169 -LTKVTHPFIVQLR-----YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
            L ++ H  +V++         +   +LY++L+                  E   +    
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLY 163

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            ++  V ++H  GI+HRDLKP N L++ D  V
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVNQDCSV 195

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 20/186 (10%)

Query: 80  LSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDS 139
           ++S  P      +     E E      +      + R +GQG+FG V++   KGV   + 
Sbjct: 1   MASVNPEYFSAADVYVPDEWE------VAREKITMSRELGQGSFGMVYEGVAKGVVKDEP 54

Query: 140 DGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFIN 198
           +   A+K + +     +  ++++  E  ++ +     +V+L     ++ +   +I++ + 
Sbjct: 55  ETRVAIKTVNEAA-SMRERIEFLN-EASVMKEFNCHHVVRL-LGVVSQGQPTLVIMELMT 111

Query: 199 GGHL--FFHLYRQGIFREDQARFYT--------AEIVSAVSHLHKCGIVHRDLKPENILM 248
            G L  +    R  +         +         EI   +++L+    VHRDL   N ++
Sbjct: 112 RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV 171

Query: 249 DSDGHV 254
             D  V
Sbjct: 172 AEDFTV 177

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 62.7 bits (152), Expect = 2e-11
 Identities = 44/242 (18%), Positives = 91/242 (37%), Gaps = 16/242 (6%)

Query: 15  TKLKKLTITPPSASSPDFDFTEVFGPLTPCRHNNQSPASTSASLGDPQVIHNRSHSFVGP 74
             LK+      ++++       +    +   H  +   + ++    P+     S     P
Sbjct: 248 YCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRP 307

Query: 75  SPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGV 134
            P   + +S+         E   +        +   D E+    G G FG V     +GV
Sbjct: 308 MP---MDTSVFESPFSDPEELKDKKLFLKRDNLLIADIEL----GCGNFGSVR----QGV 356

Query: 135 DDGDSDGIY-AMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLI 193
                  I  A+KV+++ T  K +  + M+ E  I+ ++ +P+IV+L         L L+
Sbjct: 357 YRMRKKQIDVAIKVLKQGTE-KADTEEMMR-EAQIMHQLDNPYIVRL-IGVCQAEALMLV 413

Query: 194 LDFINGGHLFFHL-YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
           ++   GG L   L  ++             ++   + +L +   VHR+L   N+L+ +  
Sbjct: 414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH 473

Query: 253 HV 254
           + 
Sbjct: 474 YA 475

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 10/150 (6%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +   D  +   +G+G FG+VF     G    D+  + A+K  R+          +++ E 
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVF----SGRLRADNTLV-AVKSCRETLP-PDLKAKFLQ-EA 163

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEI 224
            IL + +HP IV+L     T+ + +Y++++ + GG     L       R         + 
Sbjct: 164 RILKQYSHPNIVRL-IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            + + +L     +HRDL   N L+     +
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVL 252

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 30/159 (18%), Positives = 64/159 (40%), Gaps = 8/159 (5%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY--AMKVMRKDTIIKKNHVDYMK 163
           KI   D      +GQG F K+F+  ++ V D          +KV+ K      N+ +   
Sbjct: 4   KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR---NYSESFF 60

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYR-QGIFREDQARFYT 221
               +++K++H  +V   Y          L+ +F+  G L  +L + +            
Sbjct: 61  EAASMMSKLSHKHLVLN-YGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL 260
            ++ +A+  L +  ++H ++  +NIL+  +      +  
Sbjct: 120 KQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP 158

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 17/161 (10%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I    F + R++G+G FG V + + K  D        A+K+++ D I   +  ++++ E 
Sbjct: 20  IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVK--VAVKMLKADIIASSDIEEFLR-EA 76

Query: 167 DILTKVTHPFIVQL------RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF- 219
             + +  HP + +L        +        +IL F+  G L   L       E+     
Sbjct: 77  ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL-LASRIGENPFNLP 135

Query: 220 ------YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                 +  +I   + +L     +HRDL   N ++  D  V
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTV 176

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 61.1 bits (149), Expect = 5e-11
 Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 13/150 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I P D    + +G G FG V   K +G  D       A+K++++ ++ +    ++++ E 
Sbjct: 21  IDPKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSED---EFIE-EA 70

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEI 224
            ++  ++H  +VQL Y   T+ + +++I +++  G L  +L   +  F+  Q      ++
Sbjct: 71  KVMMNLSHEKLVQL-YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 129

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             A+ +L     +HRDL   N L++  G V
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVV 159

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 60.7 bits (148), Expect = 5e-11
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 107 IGPGDFEIFRVV-GQGAFGKVFQVKKKGVDDGDSDGIY-AMKVMRKDTIIKKNHVDYMKA 164
           +   +  I  +  G G FG V     +GV       I  A+KV+++ T  K +  + M+ 
Sbjct: 6   LKRDNLLIADIELGCGNFGSVR----QGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMR- 59

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHL-YRQGIFREDQARFYTAE 223
           E  I+ ++ +P+IV+L         L L+++   GG L   L  ++             +
Sbjct: 60  EAQIMHQLDNPYIVRL-IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 118

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +   + +L +   VHRDL   N+L+ +  + 
Sbjct: 119 VSMGMKYLEEKNFVHRDLAARNVLLVNRHYA 149

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 60.9 bits (148), Expect = 8e-11
 Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 33/202 (16%)

Query: 61  PQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQ 120
            Q++   S    G   R  L++  P    + +       E      I      +   +GQ
Sbjct: 143 QQLVAYYSKHADGLCHR--LTTVCPTSKPQTQGLAKDAWE------IPRESLRLEVKLGQ 194

Query: 121 GAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQL 180
           G FG+V+     G          A+K ++  T+  +    +++ E  ++ K+ H  +VQL
Sbjct: 195 GCFGEVWMGTWNGTTR------VAIKTLKPGTMSPE---AFLQ-EAQVMKKLRHEKLVQL 244

Query: 181 RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT--------AEIVSAVSHLH 232
            Y+  +   +Y++ ++++ G L   L      + +  ++          A+I S ++++ 
Sbjct: 245 -YAVVSEEPIYIVTEYMSKGSLLDFL------KGETGKYLRLPQLVDMAAQIASGMAYVE 297

Query: 233 KCGIVHRDLKPENILMDSDGHV 254
           +   VHRDL+  NIL+  +   
Sbjct: 298 RMNYVHRDLRAANILVGENLVC 319

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 31/165 (18%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG-------IYAMKVMRKDTIIKKNHVDY 161
              + + R +  G++G V           DS+G       ++      +   I  +    
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGV-------DSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73

Query: 162 MKAERDI--LTKVTHPFIVQLR-----YSFQTRSKLYLILDFINGGHLFFHLYR-----Q 209
            +  R+I  L    HP I+ LR     +      KLYL+ + +        L +     +
Sbjct: 74  KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-----TDLAQVIHDQR 128

Query: 210 GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            +      +++   I+  +  LH+ G+VHRDL P NIL+  +  +
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDI 173

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 24/157 (15%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
              +   + +G G  G VF        D D D   A+K   K  I+  +      A R+I
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAV-----DNDCDKRVAIK---K--IVLTDPQSVKHALREI 59

Query: 169 --LTKVTHPFIVQL----RYSFQTRSKLYLILDFINGGHLFFHLY--------RQGIFRE 214
             + ++ H  IV++      S    +     L  +N  ++              QG   E
Sbjct: 60  KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE 119

Query: 215 DQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
           + AR +  +++  + ++H   ++HRDLKP N+ ++++
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE 156

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 39/191 (20%), Positives = 63/191 (32%), Gaps = 30/191 (15%)

Query: 85  PLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYA 144
            + I   +   D + E               + +G GAFGKV +    G+   D+    A
Sbjct: 4   YVYIDPTQLPYDHKWE------FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVA 57

Query: 145 MKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSK-LYLILDFINGGHL 202
           +K M K +         M  E  +L+ +  H  IV L     T      +I ++   G L
Sbjct: 58  VK-MLKPSAHLTEREALMS-ELKVLSYLGNHMNIVNL-LGACTIGGPTLVITEYCCYGDL 114

Query: 203 ----------FFHLYRQGIFREDQARFYT--------AEIVSAVSHLHKCGIVHRDLKPE 244
                     F          ED               ++   ++ L     +HRDL   
Sbjct: 115 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 174

Query: 245 NILMDSDGHVM 255
           NIL+ + G + 
Sbjct: 175 NILL-THGRIT 184

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 28/150 (18%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +     ++   +G G FG+V+     G          A+K +++ ++       ++  E 
Sbjct: 10  VPRETLKLVERLGAGQFGEVWMGYYNGHTK------VAVKSLKQGSMSPD---AFLA-EA 59

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEI 224
           +++ ++ H  +V+L Y+  T+  +Y+I +++  G L  F           ++     A+I
Sbjct: 60  NLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              ++ + +   +HRDL+  NIL+      
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSC 148

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 13/150 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +   +  + + +G G FG V   K KG  D       A+K++++ ++ +    ++ + E 
Sbjct: 5   LKREEITLLKELGSGQFGVVKLGKWKGQYD------VAVKMIKEGSMSED---EFFQ-EA 54

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEI 224
             + K++HP +V+  Y   ++   +Y++ ++I+ G L  +L          Q      ++
Sbjct: 55  QTMMKLSHPKLVKF-YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDV 113

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              ++ L     +HRDL   N L+D D  V
Sbjct: 114 CEGMAFLESHQFIHRDLAARNCLVDRDLCV 143

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 14/213 (6%)

Query: 49  QSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIG 108
             P  +    G   +    +  +                  +L   N   ++A     IG
Sbjct: 26  LVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIG 85

Query: 109 PGDFEI--FRVVGQGAFGKVFQVKKKGV--DDGDSDGIYAMKVMRKDTIIKKNHVDYMKA 164
           P    +    V+G+G FG V+     G   D+       A+K +            ++  
Sbjct: 86  PSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLT- 139

Query: 165 ERDILTKVTHPFIVQLR-YSFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYT 221
           E  I+   +HP ++ L     ++     ++L ++  G L  F          +D   F  
Sbjct: 140 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF-G 198

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            ++   +  L     VHRDL   N ++D    V
Sbjct: 199 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 231

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 34/158 (21%), Positives = 72/158 (45%), Gaps = 13/158 (8%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK 163
            +++   +  + R +G GAFG+V++ +  G+ +  S    A+K +  +   +++ +D++ 
Sbjct: 24  LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLM 82

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQGIFREDQARFYT- 221
            E  I++K  H  IV+       +S   +++++ + GG L   L R+   R  Q      
Sbjct: 83  -EALIISKFNHQNIVRC-IGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAM 139

Query: 222 -------AEIVSAVSHLHKCGIVHRDLKPENILMDSDG 252
                   +I     +L +   +HRD+   N L+   G
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 177

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 59.9 bits (145), Expect = 2e-10
 Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 33/202 (16%)

Query: 61  PQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQ 120
            Q++   S    G   R  L++  P    + +       E      I      +   +GQ
Sbjct: 226 QQLVAYYSKHADGLCHR--LTTVCPTSKPQTQGLAKDAWE------IPRESLRLEVKLGQ 277

Query: 121 GAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQL 180
           G FG+V+     G          A+K ++  T+  +    +++ E  ++ K+ H  +VQL
Sbjct: 278 GCFGEVWMGTWNGTTR------VAIKTLKPGTMSPE---AFLQ-EAQVMKKLRHEKLVQL 327

Query: 181 RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT--------AEIVSAVSHLH 232
            Y+  +   +Y++ ++++ G L   L      + +  ++          A+I S ++++ 
Sbjct: 328 -YAVVSEEPIYIVTEYMSKGSLLDFL------KGETGKYLRLPQLVDMAAQIASGMAYVE 380

Query: 233 KCGIVHRDLKPENILMDSDGHV 254
           +   VHRDL+  NIL+  +   
Sbjct: 381 RMNYVHRDLRAANILVGENLVC 402

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 42/196 (21%), Positives = 75/196 (38%), Gaps = 24/196 (12%)

Query: 75  SPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGV 134
           SP     S L   I E    N           I   D  +   +G+GAFGKVF  +   +
Sbjct: 10  SPTEGKGSGLQGHIIE----NPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNL 65

Query: 135 DDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK-LYLI 193
                  + A+K +++ +  +    D+ + E ++LT + H  IV+  +   T  + L ++
Sbjct: 66  LPEQDKMLVAVKALKEAS--ESARQDFQR-EAELLTMLQHQHIVRF-FGVCTEGRPLLMV 121

Query: 194 LDFINGGHLFFHLYRQGIFREDQARFYT---------------AEIVSAVSHLHKCGIVH 238
            +++  G L   L   G   +  A                   +++ + + +L     VH
Sbjct: 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVH 181

Query: 239 RDLKPENILMDSDGHV 254
           RDL   N L+     V
Sbjct: 182 RDLATRNCLVGQGLVV 197

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 13/169 (7%)

Query: 94  ENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI 153
                      +++   +  + R +G GAFG+V++ +  G+ +  S    A+K +  +  
Sbjct: 55  FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVC 113

Query: 154 IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQGIF 212
            +++ +D++  E  I++K  H  IV+       +S   +++L+ + GG L   L R+   
Sbjct: 114 SEQDELDFLM-EALIISKFNHQNIVRC-IGVSLQSLPRFILLELMAGGDLKSFL-RETRP 170

Query: 213 REDQARFYT--------AEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
           R  Q              +I     +L +   +HRD+   N L+   G 
Sbjct: 171 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP 219

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 42/216 (19%), Positives = 86/216 (39%), Gaps = 32/216 (14%)

Query: 61  PQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQ 120
               H+  H +  P+        +   + E E   D   E      +      + + +G+
Sbjct: 26  GYYHHHHHHDYDIPTTENLYFQGMLAGVSEYELPEDPRWE------LPRDRLVLGKPLGE 79

Query: 121 GAFGKVFQVKKKGVDDGDSDGIY--AMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFI 177
           GAFG+V   +  G+D    + +   A+K M K    +K+  D +  E +++  +  H  I
Sbjct: 80  GAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLIS-EMEMMKMIGKHKNI 137

Query: 178 VQLRYSFQTRSK-LYLILDFINGGHL-----------------FFHLYRQGIFREDQARF 219
           + L     T+   LY+I+++ + G+L                   H   + +  +D    
Sbjct: 138 INL-LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
              ++   + +L     +HRDL   N+L+ ++ +VM
Sbjct: 197 -AYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVM 230

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 17/152 (11%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +   + ++ + +G+G FG V     +G          A+K ++ D   +     ++  E 
Sbjct: 18  LNMKELKLLQTIGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQ----AFLA-EA 65

Query: 167 DILTKVTHPFIVQLRYSFQTRSK--LYLILDFINGGHL--FFHLYRQGIFREDQARFYTA 222
            ++T++ H  +VQL        K  LY++ +++  G L  +     + +   D    ++ 
Sbjct: 66  SVMTQLRHSNLVQL-LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 124

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++  A+ +L     VHRDL   N+L+  D   
Sbjct: 125 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA 156

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 90  ELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGV--DDGDSDGIYAMKV 147
           EL       +   S   +         V+G+G FG V+     G   D+       A+K 
Sbjct: 10  ELVQAVQHVVIGPSSLIV-----HFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKS 60

Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLR-YSFQTRSKLYLILDFINGGHL--FF 204
           +            ++  E  I+   +HP ++ L     ++     ++L ++  G L  F 
Sbjct: 61  L-NRITDIGEVSQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

Query: 205 HLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                    +D   F   ++   + +L     VHRDL   N ++D    V
Sbjct: 119 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV 167

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +   D  +   +G G +G+V+    +GV    S  + A+K +++DT+  +   +++K E 
Sbjct: 10  MERTDITMKHKLGGGQYGEVY----EGVWKKYSLTV-AVKTLKEDTMEVE---EFLK-EA 60

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHL--FFHLYRQGIFREDQARFYTAE 223
            ++ ++ HP +VQL     TR    Y+I +F+  G+L  +     +         +   +
Sbjct: 61  AVMKEIKHPNLVQL-LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           I SA+ +L K   +HRDL   N L+  +  V
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLV 150

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 35/199 (17%), Positives = 80/199 (40%), Gaps = 25/199 (12%)

Query: 61  PQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQ 120
            Q++ + +    G   R      +   +   +    +         +   + ++ + +G+
Sbjct: 150 MQLVEHYTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWA------LNMKELKLLQTIGK 203

Query: 121 GAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQL 180
           G FG V     +G          A+K ++ D   +     ++  E  ++T++ H  +VQL
Sbjct: 204 GEFGDVMLGDYRGNK-------VAVKCIKNDATAQ----AFLA-EASVMTQLRHSNLVQL 251

Query: 181 RY--SFQTRSKLYLILDFINGGHLFFHL---YRQGIFREDQARFYTAEIVSAVSHLHKCG 235
                 + +  LY++ +++  G L  +L    R  +  +   +F + ++  A+ +L    
Sbjct: 252 -LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEAMEYLEGNN 309

Query: 236 IVHRDLKPENILMDSDGHV 254
            VHRDL   N+L+  D   
Sbjct: 310 FVHRDLAARNVLVSEDNVA 328

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 57.9 bits (140), Expect = 9e-10
 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +   D  +   +G G +G+V+    +GV    S  + A+K +++DT+  +   +++K E 
Sbjct: 217 MERTDITMKHKLGGGQYGEVY----EGVWKKYSLTV-AVKTLKEDTMEVE---EFLK-EA 267

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHL--FFHLYRQGIFREDQARFYTAE 223
            ++ ++ HP +VQL     TR    Y+I +F+  G+L  +     +         +   +
Sbjct: 268 AVMKEIKHPNLVQL-LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 326

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           I SA+ +L K   +HR+L   N L+  +  V
Sbjct: 327 ISSAMEYLEKKNFIHRNLAARNCLVGENHLV 357

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 16/151 (10%)

Query: 113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV 172
            + +++G+G FG V +   K  D        A+K M+ D   ++   +++  E   +   
Sbjct: 37  ILGKILGEGEFGSVMEGNLKQEDGTSLK--VAVKTMKLDNSSQREIEEFLS-EAACMKDF 93

Query: 173 THPFIVQL-----RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARF-------Y 220
           +HP +++L       S Q   K  +IL F+  G L  +L                    +
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL-LYSRLETGPKHIPLQTLLKF 152

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
             +I   + +L     +HRDL   N ++  D
Sbjct: 153 MVDIALGMEYLSNRNFLHRDLAARNCMLRDD 183

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 21/168 (12%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK 163
            + I   D  + R +G+GAFGKVF  +   +       + A+K ++  T       D+ +
Sbjct: 9   VQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQR 66

Query: 164 AERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHL---------FFHLYRQGIFR 213
            E ++LT + H  IV+  Y        L ++ +++  G L            +   G  R
Sbjct: 67  -EAELLTNLQHEHIVKF-YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR 124

Query: 214 EDQARFYT-------AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           + +            ++I S + +L     VHRDL   N L+ ++  V
Sbjct: 125 QAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLV 172

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 30/159 (18%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK-----NHVDYMK 163
             DF++  ++G+GA+G V            +  I A         IKK       +  ++
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSAT-----HKPTGEIVA---------IKKIEPFDKPLFALR 55

Query: 164 AERDI--LTKVTHPFIVQLRYSFQTRSK-----LYLILDFINGG-HLFFHLYRQGIFRED 215
             R+I  L    H  I+ +    +  S      +Y+I + +    H    +    +  +D
Sbjct: 56  TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDD 112

Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +++  + + AV  LH   ++HRDLKP N+L++S+  +
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDL 151

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 22/199 (11%)

Query: 75  SPRYALSSSLPLQIQ--ELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKK 132
            P+Y +   +    +       +  +L    + +    + +  + +G GAFGKV +    
Sbjct: 9   KPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAF 68

Query: 133 GVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSK-L 190
           G+   D+    A+K M K T         M  E  I++ +  H  IV L     T    +
Sbjct: 69  GLGKEDAVLKVAVK-MLKSTAHADEKEALMS-ELKIMSHLGQHENIVNL-LGACTHGGPV 125

Query: 191 YLILDFINGGHLFFHLYRQGIFREDQARFYT--------------AEIVSAVSHLHKCGI 236
            +I ++   G L   L R+    E    F                +++   ++ L     
Sbjct: 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC 185

Query: 237 VHRDLKPENILMDSDGHVM 255
           +HRD+   N+L+ ++GHV 
Sbjct: 186 IHRDVAARNVLL-TNGHVA 203

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 19/151 (12%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
              ++  + +G GA G V         D   D   A+K   K +   +N     +A R++
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAY-----DAVLDRNVAIK---KLSRPFQNQTHAKRAYREL 112

Query: 169 --LTKVTHPFIVQLR------YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
             +  V H  I+ L        + +    +YL+++ +        + +  +   ++  + 
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM--DANLCQVIQMEL-DHERMSYL 169

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
             +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 34/196 (17%)

Query: 82  SSLPL--QIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDS 139
             LPL    + L ++   + E            ++ + +G+GAFG+V +    G+D   +
Sbjct: 4   DELPLDEHCERLPYDAS-KWE------FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTAT 56

Query: 140 DGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRY--SFQTRSKLYLILDF 196
               A+K M K+      H   M  E  IL  +  H  +V L      +    L +I++F
Sbjct: 57  CRTVAVK-MLKEGATHSEHRALMS-ELKILIHIGHHLNVVNL-LGACTKPGGPLMVIVEF 113

Query: 197 INGGHL-----------------FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHR 239
              G+L                    LY+  +  E    + + ++   +  L     +HR
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY-SFQVAKGMEFLASRKCIHR 172

Query: 240 DLKPENILMDSDGHVM 255
           DL   NIL+ S+ +V+
Sbjct: 173 DLAARNILL-SEKNVV 187

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 20/155 (12%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
              +   + VG GA+G V         DG +    A+K   K     ++ +   +A R++
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSAV-----DGRTGAKVAIK---KLYRPFQSELFAKRAYREL 75

Query: 169 --LTKVTHPFIVQLR------YSFQTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARF 219
             L  + H  ++ L        +    +  YL++ F+         L +     ED+ +F
Sbjct: 76  RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLG---KLMKHEKLGEDRIQF 132

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              +++  + ++H  GI+HRDLKP N+ ++ D  +
Sbjct: 133 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCEL 167

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 41/233 (17%)

Query: 45  RHNNQSPASTSASLGDPQVIHNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESE 104
           +    + +S+S +   P V      S    +P  A  S       E E   D + E    
Sbjct: 29  QVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVS-------EYELPEDPKWE---- 77

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKV---MRKDTIIKKNHVDY 161
                    + + +G+G FG+V   +  G+D        A+ V   M KD   +K+  D 
Sbjct: 78  --FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDL 133

Query: 162 MKAERDILTKV-THPFIVQLRYSFQTRSK-LYLILDFINGGHL----------------- 202
           +  E +++  +  H  I+ L     T+   LY+I+++ + G+L                 
Sbjct: 134 VS-EMEMMKMIGKHKNIINL-LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191

Query: 203 FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
              +  + +  +D     T ++   + +L     +HRDL   N+L+ ++ +VM
Sbjct: 192 INRVPEEQMTFKDLVSC-TYQLARGMEYLASQKCIHRDLAARNVLV-TENNVM 242

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 31/205 (15%)

Query: 72  VGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKK 131
           +G S  +   S  P+     E+E   + + E  R        + + +G+GAFG+V   + 
Sbjct: 1   MGSSHHHHHHSQDPMLAGVSEYELPEDPKWEFPRD----KLTLGKPLGEGAFGQVVMAEA 56

Query: 132 KGVDDGDSDGIYAMKV---MRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR 187
            G+D        A+ V   M KD   +K+  D +  E +++  +  H  I+ L     T+
Sbjct: 57  VGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVS-EMEMMKMIGKHKNIINL-LGACTQ 112

Query: 188 SK-LYLILDFINGGHL-----------------FFHLYRQGIFREDQARFYTAEIVSAVS 229
              LY+I+++ + G+L                    +  + +  +D     T ++   + 
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGME 171

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           +L     +HRDL   N+L+  +  +
Sbjct: 172 YLASQKCIHRDLAARNVLVTENNVM 196

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 55.5 bits (134), Expect = 3e-09
 Identities = 30/153 (19%), Positives = 61/153 (39%), Gaps = 16/153 (10%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK 163
           E ++G   + + R +G G+FG ++        D  +    A+K+    T  K   +    
Sbjct: 4   ELRVG-NRYRLGRKIGSGSFGDIYLGT-----DIAAGEEVAIKLECVKT--KHPQLHI-- 53

Query: 164 AERDILTKVTH-PFIVQLRYSFQTRSKLYLILDFI--NGGHLFFHLYRQGIFREDQARFY 220
            E  I   +     I  +R+         ++++ +  +   LF    R+  F        
Sbjct: 54  -ESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLL 110

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
             +++S + ++H    +HRD+KP+N LM     
Sbjct: 111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK 143

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 16/153 (10%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           P ++ I  ++G+G++G V+        D +++   A+K   K   + ++ +D  +  R+I
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLAY-----DKNTEKNVAIK---KVNRMFEDLIDCKRILREI 76

Query: 169 --LTKVTHPFIVQLR-----YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
             L ++   +I++L             +LY++L+      L           E+  +   
Sbjct: 77  TILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIFLTEEHIKTIL 135

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             ++   + +H+ GI+HRDLKP N L++ D  V
Sbjct: 136 YNLLLGENFIHESGIIHRDLKPANCLLNQDCSV 168

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 19/154 (12%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           P  +     VG GA+G V         D  S    A+K   K +   ++ +   +A R++
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAI-----DKRSGEKVAIK---KLSRPFQSEIFAKRAYREL 74

Query: 169 --LTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQARFY 220
             L  + H  ++ L   F   S        YL++ F+    L         F E++ ++ 
Sbjct: 75  LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDL--QKIMGLKFSEEKIQYL 131

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +++  + ++H  G+VHRDLKP N+ ++ D  +
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCEL 165

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 55.1 bits (133), Expect = 5e-09
 Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 16/149 (10%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
               +G   +++ R +G+G+FG +F+       +  ++   A+K   + +      +   
Sbjct: 4   QNNVVG-VHYKVGRRIGEGSFGVIFEGT-----NLLNNQQVAIKFEPRRS--DAPQLRD- 54

Query: 163 KAERDILTKVTH-PFIVQLRYSFQTRSKLYLILDFI--NGGHLFFHLYRQGIFREDQARF 219
             E      +     I  + Y  Q      L++D +  +   L     R+  F       
Sbjct: 55  --EYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAM 110

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILM 248
              ++++ V  +H+  +V+RD+KP+N L+
Sbjct: 111 AAKQMLARVQSIHEKSLVYRDIKPDNFLI 139

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 54.5 bits (132), Expect = 7e-09
 Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 20/165 (12%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I          +G+  FGKV++    G   G+     A+K ++          ++   E 
Sbjct: 6   ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRH-EA 63

Query: 167 DILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHLFFHLYRQGIFREDQARFYT---- 221
            +  ++ HP +V L     T+ + L +I  + + G L   L  +    +  +        
Sbjct: 64  MLRARLQHPNVVCL-LGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122

Query: 222 ------------AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                       A+I + + +L    +VH+DL   N+L+    +V
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNV 167

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 54.6 bits (132), Expect = 8e-09
 Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 30/159 (18%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK-----NHVDYMK 163
              +     +G+GA+G V         D  +    A         IKK     +     +
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAY-----DNLNKVRVA---------IKKISPFEHQTYCQR 71

Query: 164 AERDI--LTKVTHPFIVQLRYSFQTRSK-----LYLILDFINGG-HLFFHLYRQGIFRED 215
             R+I  L +  H  I+ +    +  +      +Y++ D +    +    L +      D
Sbjct: 72  TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY---KLLKTQHLSND 128

Query: 216 QARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              ++  +I+  + ++H   ++HRDLKP N+L+++   +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDL 167

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 43/191 (22%), Positives = 73/191 (38%), Gaps = 29/191 (15%)

Query: 90  ELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR 149
           E  + +  E E + + +    + E  +V+G GAFGKV      G+         A+K M 
Sbjct: 25  EYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK-ML 83

Query: 150 KDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRSK-LYLILDFINGGHL----- 202
           K+          M  E  ++T++ +H  IV L     T S  +YLI ++   G L     
Sbjct: 84  KEKADSSEREALMS-ELKMMTQLGSHENIVNL-LGACTLSGPIYLIFEYCCYGDLLNYLR 141

Query: 203 ----------FFHLYRQGIFREDQARFYT--------AEIVSAVSHLHKCGIVHRDLKPE 244
                       +  ++ +  E+     T         ++   +  L     VHRDL   
Sbjct: 142 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201

Query: 245 NILMDSDGHVM 255
           N+L  + G V+
Sbjct: 202 NVL-VTHGKVV 211

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 16/154 (10%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
               +G  +F + + +G G FG++   K     +  ++   A+K+        K+    +
Sbjct: 3   GVLMVG-PNFRVGKKIGCGNFGELRLGK-----NLYTNEYVAIKLEPM-----KSRAPQL 51

Query: 163 KAERDILTKVTH-PFIVQLRYSFQTRSKLYLILDFI--NGGHLFFHLYRQGIFREDQARF 219
             E     ++     I Q+ Y         ++L+ +  +   LF    R   F       
Sbjct: 52  HLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT--FSLKTVLM 109

Query: 220 YTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
              +++S + ++H   +++RD+KPEN L+   G+
Sbjct: 110 IAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN 143

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 54.6 bits (131), Expect = 1e-08
 Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 16/153 (10%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK 163
           E ++G   F + R +G G+FG+++        +  ++   A+K+    T  K   + Y  
Sbjct: 2   EPRVG-NKFRLGRKIGSGSFGEIYLGT-----NIQTNEEVAIKLENVKT--KHPQLLY-- 51

Query: 164 AERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFI--NGGHLFFHLYRQGIFREDQARFY 220
            E  I   +     I  +R+         L++D +  +   LF    R+           
Sbjct: 52  -ESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLML 108

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
             ++++ V  +H    +HRD+KP+N LM     
Sbjct: 109 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 32/154 (20%), Positives = 67/154 (43%), Gaps = 18/154 (11%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           P  ++    VG GA+G V         D  +    A+K   K +   ++ +   +  R++
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAF-----DTKTGLRVAVK---KLSRPFQSIIHAKRTYREL 79

Query: 169 --LTKVTHPFIVQLR------YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
             L  + H  ++ L        S +  + +YL+   +  G    ++ +     +D  +F 
Sbjct: 80  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +I+  + ++H   I+HRDLKP N+ ++ D  +
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 53.7 bits (130), Expect = 1e-08
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 31/154 (20%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGV-DDGDSDGIYAMKVMRKDTIIKKNHVDYM------K 163
           +F+   ++G G FGKV+    KGV  DG        KV      +K+   +        +
Sbjct: 40  NFDHKFLIGHGVFGKVY----KGVLRDG-------AKVA-----LKRRTPESSQGIEEFE 83

Query: 164 AERDILTKVTHPFIVQLR-YSFQTRSKLYLILDFINGGHLFFHLYRQGIFRED---QARF 219
            E + L+   HP +V L  +  + R+++ LI  ++  G+L  HLY   +       + R 
Sbjct: 84  TEIETLSFCRHPHLVSLIGFCDE-RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142

Query: 220 YTAEIVSA--VSHLHKCGIVHRDLKPENILMDSD 251
               I +A  + +LH   I+HRD+K  NIL+D +
Sbjct: 143 EIC-IGAARGLHYLHTRAIIHRDVKSINILLDEN 175

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 31/188 (16%)

Query: 94  ENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI 153
            +  ++  + + +    +  + + +G+G FGKV +     +         A+K M K+  
Sbjct: 7   VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK-MLKENA 65

Query: 154 IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK-LYLILDFINGGHL---------- 202
                 D +  E ++L +V HP +++L Y   ++   L LI+++   G L          
Sbjct: 66  SPSELRDLLS-EFNVLKQVNHPHVIKL-YGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123

Query: 203 ---------------FFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL 247
                            H   + +   D   F   +I   + +L +  +VHRDL   NIL
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISF-AWQISQGMQYLAEMKLVHRDLAARNIL 182

Query: 248 MDSDGHVM 255
           + ++G  M
Sbjct: 183 V-AEGRKM 189

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 10/146 (6%)

Query: 113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV 172
              RV+G+G FG V+  +             A+K + + T   +    +++ E  ++  +
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQ--CAIKSLSRITE-MQQVEAFLR-EGLLMRGL 79

Query: 173 THPFIVQLRY--SFQTRSKLYLILDFINGGHL--FFHLYRQGIFREDQARFYTAEIVSAV 228
            HP ++ L            +++L ++  G L  F    ++    +D   F   ++   +
Sbjct: 80  NHPNVLAL-IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF-GLQVARGM 137

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
            +L +   VHRDL   N ++D    V
Sbjct: 138 EYLAEQKFVHRDLAARNCMLDESFTV 163

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 15/151 (9%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
              +E+ + +G+GA+G V++       D  +  + A+K   K     +N  D  +  R+I
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSI-----DRRTGEVVAVK---KIFDAFQNSTDAQRTFREI 59

Query: 169 --LTK-VTHPFIVQLRYSFQTRSK--LYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
             LT+   H  IV L    +  +   +YL+ D++        + R  I      ++   +
Sbjct: 60  MILTELSGHENIVNLLNVLRADNDRDVYLVFDYM--ETDLHAVIRANILEPVHKQYVVYQ 117

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++  + +LH  G++HRD+KP NIL++++ HV
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHV 148

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 24/153 (15%), Positives = 53/153 (34%), Gaps = 14/153 (9%)

Query: 112 FEIFRVVGQGAFGKVF---QVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD- 167
           +++     +   G ++          D G     +++K+  KD  +      + +A +  
Sbjct: 44  WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPL 103

Query: 168 ------ILTKVTHPFIVQLRYSFQTRSKL-YLILDFINGGHL--FFHLYRQGIFREDQAR 218
                  L       I         + K  +L+L  + G  L     +  + +  E    
Sbjct: 104 QVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVL 162

Query: 219 FYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
                ++ A+  LH+   VH ++  ENI +D +
Sbjct: 163 QVACRLLDALEFLHENEYVHGNVTAENIFVDPE 195

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 52.2 bits (125), Expect = 5e-08
 Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 17/189 (8%)

Query: 84  LPL--QIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG 141
           LPL    + L ++   + E            ++ + +G+GAFG+V +    G+D   +  
Sbjct: 1   LPLDEHCERLPYDAS-KWE------FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCR 53

Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQ-LRYSFQTRSKLYLILDFING 199
             A+K M K+      H   M  E  IL  +  H  +V  L    +    L +I++F   
Sbjct: 54  TVAVK-MLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 111

Query: 200 GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS 259
           G+L  +L      + ++   Y  +           G +  DLK     + S     ++  
Sbjct: 112 GNLSTYLRS----KRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167

Query: 260 LNSHNQLCC 268
           +   +    
Sbjct: 168 VEEKSLSDV 176

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 52.5 bits (126), Expect = 5e-08
 Identities = 29/159 (18%), Positives = 60/159 (37%), Gaps = 26/159 (16%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDT--------IIKKNHVDY 161
             +++   +GQG FG ++       +   SD    +KV   D           ++     
Sbjct: 35  AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPE 94

Query: 162 MKAERDILTKVTHPFIVQLRYS----FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQA 217
              +     K+ +  + +   S       +S  ++I+D   G  L      Q I+  +  
Sbjct: 95  QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDL------QKIYEANAK 147

Query: 218 RF-------YTAEIVSAVSHLHKCGIVHRDLKPENILMD 249
           RF        +  I+  + ++H+   VH D+K  N+L++
Sbjct: 148 RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN 186

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 19/151 (12%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
              ++  + +G GA G V         D   +   A+K   K +   +N     +A R++
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAY-----DAILERNVAIK---KLSRPFQNQTHAKRAYREL 75

Query: 169 --LTKVTHPFIVQLR------YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFY 220
             +  V H  I+ L        S +    +Y++++ +        + +  +   ++  + 
Sbjct: 76  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM--DANLCQVIQMEL-DHERMSYL 132

Query: 221 TAEIVSAVSHLHKCGIVHRDLKPENILMDSD 251
             +++  + HLH  GI+HRDLKP NI++ SD
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 28/197 (14%), Positives = 70/197 (35%), Gaps = 29/197 (14%)

Query: 65  HNRSHSFVGPSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFG 124
           H+ S   +G    Y  S   P              E +    +    + + + +G G FG
Sbjct: 6   HHSSGVDLGTENLYFQSMPFP--------------EGKVLDDMEGNQWVLGKKIGSGGFG 51

Query: 125 KVFQVKKKGVDDGDSDGIYAMKVMRKDT--------IIKKNHVDYMKAERDILTKVTHPF 176
            ++       +  + D  + +KV  ++           ++        +     ++ +  
Sbjct: 52  LIYLAFP--TNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLG 109

Query: 177 IVQLRYS--FQTRSKLY--LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH 232
           I     S   + + + Y  ++++ + G  L     + G F++         ++  + ++H
Sbjct: 110 IPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH 168

Query: 233 KCGIVHRDLKPENILMD 249
           +   VH D+K  N+L+ 
Sbjct: 169 ENEYVHGDIKAANLLLG 185

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 42/207 (20%), Positives = 78/207 (37%), Gaps = 42/207 (20%)

Query: 74  PSPRYALSSSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKG 133
           P+P Y     L L  + L  E                + E  R +G+GAFG+VFQ +  G
Sbjct: 24  PNPMYQ-RMPLLLNPKLLSLE------------YPRNNIEYVRDIGEGAFGRVFQARAPG 70

Query: 134 VDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK-LYL 192
           +   +   + A+K M K+        D+ + E  ++ +  +P IV+L        K + L
Sbjct: 71  LLPYEPFTMVAVK-MLKEEASADMQADFQR-EAALMAEFDNPNIVKL-LGVCAVGKPMCL 127

Query: 193 ILDFINGGHL----------------FFHLYRQGIFREDQARFYT--------AEIVSAV 228
           + +++  G L                   L  +           +         ++ + +
Sbjct: 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM 187

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVM 255
           ++L +   VHRDL   N L+  +  V+
Sbjct: 188 AYLSERKFVHRDLATRNCLV-GENMVV 213

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 40/185 (21%), Positives = 74/185 (40%), Gaps = 28/185 (15%)

Query: 88  IQELEHENDAELEAESERK--IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIY-A 144
           +++  H +  +   +      +   D +   V+G+G FG+V     K     D   +  A
Sbjct: 1   MKKHHHHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVL----KARIKKDGLRMDAA 56

Query: 145 MKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSK-LYLILDFINGGHL 202
           +K   K+   K +H D+   E ++L K+  HP I+ L          LYL +++   G+L
Sbjct: 57  IK-RMKEYASKDDHRDFAG-ELEVLCKLGHHPNIINL-LGACEHRGYLYLAIEYAPHGNL 113

Query: 203 FFHLYRQGIFREDQARFYT----------------AEIVSAVSHLHKCGIVHRDLKPENI 246
              L +  +   D A                    A++   + +L +   +HRDL   NI
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 173

Query: 247 LMDSD 251
           L+  +
Sbjct: 174 LVGEN 178

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 23/145 (15%)

Query: 117 VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN--HVDYMKAERDILTKVTH 174
            +G+G FG V+    KG  +       A+K +     I        +   E  ++ K  H
Sbjct: 38  KMGEGGFGVVY----KGYVNN---TTVAVKKLAAMVDITTEELKQQF-DQEIKVMAKCQH 89

Query: 175 PFIVQLR-YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQA------RFYTAE-IVS 226
             +V+L  +S        L+  ++  G L   L       +         R   A+   +
Sbjct: 90  ENLVELLGFSSDGDDLC-LVYVYMPNGSLLDRLSC----LDGTPPLSWHMRCKIAQGAAN 144

Query: 227 AVSHLHKCGIVHRDLKPENILMDSD 251
            ++ LH+   +HRD+K  NIL+D  
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEA 169

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 46.4 bits (111), Expect = 4e-06
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 19/151 (12%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGV-DDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
            +F    ++G+G FGKV+    KG   DG    + A+K + K+   +   + + + E ++
Sbjct: 30  DNFSNKNILGRGGFGKVY----KGRLADGT---LVAVKRL-KEERTQGGELQF-QTEVEM 80

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFRED---QARFYTAEIV 225
           ++   H  +++LR    T ++  L+  ++  G +   L  +   +       R   A + 
Sbjct: 81  ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA-LG 139

Query: 226 SA--VSHLH-KCG--IVHRDLKPENILMDSD 251
           SA  +++LH  C   I+HRD+K  NIL+D +
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEE 170

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 47/208 (22%)

Query: 93  HENDAELEAESERKIGPGD-FEIFRVVGQGAFGKVFQVK------KKGVDDGDSDGIYAM 145
           H  D E     E +    D   +F    + AF   F  K      K  +   + D I   
Sbjct: 5   HHMDFET---GEHQYQYKDILSVF----EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS 57

Query: 146 K--VMRK----DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFING 199
           K  V        T++ K      K   ++L ++ + F++      + R    +   +I  
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKFVEEVL-RINYKFLMS-PIKTEQRQPSMMTRMYIE- 114

Query: 200 GHLFFHLYRQGIFREDQARF--YTAEIVSAVSHLHKCGIVHRDLKPENIL----MDSDG- 252
                   R  ++ ++Q  F  Y    +     L +      +L+P   +    +   G 
Sbjct: 115 -------QRDRLYNDNQ-VFAKYNVSRLQPYLKLRQA---LLELRPAKNVLIDGVLGSGK 163

Query: 253 HVMAAHSLNSHNQLCCFFFFLFLGGGVF 280
             +A     S+   C   F       +F
Sbjct: 164 TWVALDVCLSYKVQCKMDF------KIF 185

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.98
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.98
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.98
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.98
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.98
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.98
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.98
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.98
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.98
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.98
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.98
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.98
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.98
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.98
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.98
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.98
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.98
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.98
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
3uqc_A	286	Probable conserved transmembrane protein; structur	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.97
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.97
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.96
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.96
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.95
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.95
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.9
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.83
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.58
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.42
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.38
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.99
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.93
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.78
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.76
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.68
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.56
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.55
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.45
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.45
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.26
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.17
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.87
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.84
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.81
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.58
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.55
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.35
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.28
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.23
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.2
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.9
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.82
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.11
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	88.65
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	87.42
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	85.08
3ls8_A	614	Phosphatidylinositol 3-kinase catalytic subunit ty	84.31
2x6h_A	696	GH13170P, VPS34, phosphotidylinositol 3 kinase 59F	80.46
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	80.01

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=5.5e-48  Score=332.96  Aligned_cols=167  Identities=37%  Similarity=0.644  Sum_probs=153.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      +++|+++++||+|+||+||+|+++     .+++.||||++.+.........+.+.+|+++|+.++|||||+++++|.+++
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~-----~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~  105 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLAREL-----ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE  105 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccccEEEEEEecccCeEEEEEEEC-----CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC
Confidence            457999999999999999999987     467889999998876666666788999999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .+|||||||+||+|.+++.+.+.+++.+++.++.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+...  
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            999999999999999999988899999999999999999999999999999999999999999999999999996321  


Q ss_pred             -----c--chhheeeccCccc
Q 023430          267 -----C--CFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~--~~~~~~~~ape~~  280 (282)
                           .  -.||+.|||||++
T Consensus       186 ~~~~~~~~~~GTp~YmAPEvl  206 (311)
T 4aw0_A          186 SKQARANSFVGTAQYVSPELL  206 (311)
T ss_dssp             TTCCCBCCCCSCGGGCCHHHH
T ss_pred             CCcccccCcccCcccCCHHHH
Confidence                 1  1689999999987

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.3e-46  Score=327.84  Aligned_cols=167  Identities=28%  Similarity=0.487  Sum_probs=143.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||+||+|+++     .+++.||||++.+.... ....+.+.+|+.+|+.++|||||+++++|.+++
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~   96 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKST-----EDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESFEENG   96 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEET-----TTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccceEEeEEEecCCCeEEEEEEEC-----CCCCEEEEEEEehHHCC-HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC
Confidence            468999999999999999999987     46788999999876543 344677899999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+|||||||+||+|.+++..++  .+++.+++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+...
T Consensus        97 ~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A           97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence            9999999999999999997643  47899999999999999999999999999999999999999999999999997432


Q ss_pred             c-------chhheeeccCcccc
Q 023430          267 C-------CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~-------~~~~~~~~ape~~~  281 (282)
                      .       ..||+.|||||++.
T Consensus       177 ~~~~~~~~~~GT~~YmAPE~l~  198 (350)
T 4b9d_A          177 STVELARACIGTPYYLSPEICE  198 (350)
T ss_dssp             HHHHHHHHHHSCCTTCCHHHHT
T ss_pred             CCcccccccCCCccccCHHHHC
Confidence            2       15899999999874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.9e-46  Score=317.77  Aligned_cols=167  Identities=27%  Similarity=0.420  Sum_probs=139.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||+||+|+++     .+++.||||++.+.........+.+.+|+.+|+.++|||||++++++.+++
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~   86 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHT-----TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD   86 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECT-----TTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             eeCeEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence            468999999999999999999976     467889999998776555556677999999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .+||||||| +|+|.+++.+++.+++.+++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.... 
T Consensus        87 ~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  165 (275)
T 3hyh_A           87 EIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             EEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred             EEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence            999999999 679999999889999999999999999999999999999999999999999999999999999964221 


Q ss_pred             -----chhheeeccCcccc
Q 023430          268 -----CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 -----~~~~~~~~ape~~~  281 (282)
                           ..||+.|||||++.
T Consensus       166 ~~~~~~~GT~~Y~APE~~~  184 (275)
T 3hyh_A          166 NFLKTSCGSPNYAAPEVIS  184 (275)
T ss_dssp             ---------CTTSCHHHHS
T ss_pred             CccCCeeECcccCChhhhc
Confidence                 26899999999873

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=8.5e-46  Score=323.78  Aligned_cols=163  Identities=21%  Similarity=0.321  Sum_probs=145.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ..|+++++||+|+||+||+|+++     .+++.||||++.....   ...+.+.+|+.+|+.++|||||+++++|.+++.
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~-----~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~  145 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVR-----SSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE  145 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             HhcEEeEEeecCcCeEEEEEEEC-----CCCCEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            46999999999999999999987     4678899999976542   223457889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      +|||||||+||+|.+++.+ +.+++.+++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+...   
T Consensus       146 ~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  224 (346)
T 4fih_A          146 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  224 (346)
T ss_dssp             EEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             EEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence            9999999999999998865 569999999999999999999999999999999999999999999999999996321   


Q ss_pred             ----cchhheeeccCcccc
Q 023430          267 ----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ----~~~~~~~~~ape~~~  281 (282)
                          .-.||+.|||||++.
T Consensus       225 ~~~~~~~GTp~YmAPEvl~  243 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELIS  243 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHT
T ss_pred             CcccccccCcCcCCHHHHC
Confidence                126899999999874

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.5e-45  Score=329.85  Aligned_cols=164  Identities=21%  Similarity=0.312  Sum_probs=146.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ...|+++++||+|+||.||+|+++     .+++.||||++.....   ...+.+.+|+.+|+.++|||||+++++|.+.+
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~-----~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~  221 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVR-----SSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGD  221 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hHhcEeeeEeccCcCcEEEEEEEC-----CCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEEEEEECC
Confidence            356999999999999999999987     4678899999976542   22345789999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .+|||||||+||+|.+++.. +.+++.++..|+.||+.||+|||++|||||||||+||||+.+|.|||+|||+|+.... 
T Consensus       222 ~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~  300 (423)
T 4fie_A          222 ELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  300 (423)
T ss_dssp             EEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred             EEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence            99999999999999998864 5699999999999999999999999999999999999999999999999999963211 


Q ss_pred             ------chhheeeccCcccc
Q 023430          268 ------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ------~~~~~~~~ape~~~  281 (282)
                            -.||+.|||||++.
T Consensus       301 ~~~~~~~~GTp~YmAPEvl~  320 (423)
T 4fie_A          301 VPRRKSLVGTPYWMAPELIS  320 (423)
T ss_dssp             CCCBCCCEECTTTCCHHHHT
T ss_pred             CccccccccCcCcCCHHHHC
Confidence                  26899999999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.2e-46  Score=322.66  Aligned_cols=173  Identities=47%  Similarity=0.768  Sum_probs=145.8

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      +..+++|++++.||+|+||+||+|++...  ..+++.||||++++...... ....+.+|+.+|+.++|||||++++++.
T Consensus        20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~--~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~   96 (304)
T 3ubd_A           20 KADPSQFELLKVLGQGSFGKVFLVKKISG--SDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQ   96 (304)
T ss_dssp             CCCGGGEEEEEEEECGGGCEEEEEEECSS--TTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEE
T ss_pred             cCCccccEEEEEEecCCCeEEEEEEEccC--CCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEE
Confidence            34457899999999999999999987532  24678899999976543222 2235778999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      +++.+|||||||+||+|.+++.+.+.+++.+++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+..
T Consensus        97 ~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  176 (304)
T 3ubd_A           97 TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES  176 (304)
T ss_dssp             ETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred             ECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence            99999999999999999999999899999999999999999999999999999999999999999999999999999642


Q ss_pred             cc-------chhheeeccCcccc
Q 023430          266 LC-------CFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~-------~~~~~~~~ape~~~  281 (282)
                      ..       ..||+.|||||++.
T Consensus       177 ~~~~~~~~~~~GT~~YmAPE~~~  199 (304)
T 3ubd_A          177 IDHEKKAYSFCGTVEYMAPEVVN  199 (304)
T ss_dssp             ----CCCCSCCCCGGGCCHHHHH
T ss_pred             cCCCccccccccCcccCCHHHhc
Confidence            21       26899999999873

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=9.3e-45  Score=310.94  Aligned_cols=166  Identities=22%  Similarity=0.342  Sum_probs=145.2

Q ss_pred             CCe-EEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--
Q 023430          110 GDF-EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--  186 (282)
Q Consensus       110 ~~y-~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--  186 (282)
                      ++| ++.++||+|+||+||+|.++     .++..||+|++..... .....+.+.+|+.+|+.++|||||+++++|.+  
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~   98 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDT-----ETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV   98 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEEEC-----CCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc
Confidence            455 77788999999999999987     4567899999976543 33456779999999999999999999999875  


Q ss_pred             --CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcC-CCcEEEEecCc
Q 023430          187 --RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDS-DGHVMAAHSLN  261 (282)
Q Consensus       187 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~-~~~v~l~Dfg~  261 (282)
                        +..+|||||||+||+|.+++.+.+.+++..++.|+.||+.||.|||+++  ||||||||+||||+. +|.+||+|||+
T Consensus        99 ~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGl  178 (290)
T 3fpq_A           99 KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             TTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTG
T ss_pred             CCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcC
Confidence              3468999999999999999998889999999999999999999999998  999999999999985 79999999999


Q ss_pred             ccccccc-----hhheeeccCcccc
Q 023430          262 SHNQLCC-----FFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~~~~-----~~~~~~~ape~~~  281 (282)
                      |+.....     .||+.|||||+++
T Consensus       179 a~~~~~~~~~~~~GTp~YmAPE~~~  203 (290)
T 3fpq_A          179 ATLKRASFAKAVIGTPEFMAPEMYE  203 (290)
T ss_dssp             GGGCCTTSBEESCSSCCCCCGGGGG
T ss_pred             CEeCCCCccCCcccCccccCHHHcC
Confidence            9632222     6899999999873

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.1e-45  Score=319.25  Aligned_cols=161  Identities=22%  Similarity=0.265  Sum_probs=144.2

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..+.|++.++||+|+||+||+|+++     .+++.||||+++.+..        ..+|+.+|+.++|||||++++++.++
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~-----~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~  122 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDK-----QTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREG  122 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEET
T ss_pred             chhheEeCcEeccCCCeEEEEEEEC-----CCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3467999999999999999999987     4677899999976532        23699999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l~Dfg~s~~~~  266 (282)
                      +.+|||||||+||+|.+++.+.+.+++.+++.++.||+.||+|||++|||||||||+||||+.+| ++||+|||+|+...
T Consensus       123 ~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~  202 (336)
T 4g3f_A          123 PWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ  202 (336)
T ss_dssp             TEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred             CEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence            99999999999999999999888999999999999999999999999999999999999999998 69999999996422


Q ss_pred             c------------chhheeeccCcccc
Q 023430          267 C------------CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~------------~~~~~~~~ape~~~  281 (282)
                      .            -.||+.|||||++.
T Consensus       203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~  229 (336)
T 4g3f_A          203 PDGLGKSLLTGDYIPGTETHMAPEVVM  229 (336)
T ss_dssp             -----------CCCCCCGGGCCHHHHT
T ss_pred             CCCcccceecCCccccCccccCHHHHC
Confidence            1            14899999999874

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.5e-45  Score=315.41  Aligned_cols=173  Identities=20%  Similarity=0.266  Sum_probs=147.4

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|.+.+.||+|+||+||+|+++......++..||||+++...   ....+.|.+|+.+|++++|||||++++++.
T Consensus         9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~~~   85 (299)
T 4asz_A            9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCV   85 (299)
T ss_dssp             BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC---hHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence            45567899999999999999999998866555677889999997542   344567899999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ-------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~  252 (282)
                      +++.+|||||||++|+|.+++...             ..+++.+++.++.||+.||.|||+++||||||||+||||+.++
T Consensus        86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~  165 (299)
T 4asz_A           86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL  165 (299)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence            999999999999999999999764             3589999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccccc---------chhheeeccCcccc
Q 023430          253 HVMAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      .+||+|||+|+....         ..||+.|||||++.
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~  203 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  203 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHc
Confidence            999999999963211         14789999999873

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=7.4e-45  Score=317.39  Aligned_cols=174  Identities=20%  Similarity=0.253  Sum_probs=146.4

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+...+|.+.++||+|+||+||+|++++.....++..||||+++...   ....+.|.+|+.+|++++|||||++++++
T Consensus        36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~~  112 (329)
T 4aoj_A           36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQHQHIVRFFGVC  112 (329)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            345556899999999999999999998865555677889999997542   34456799999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ---------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD  249 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~  249 (282)
                      .+.+.+|||||||++|+|.+++...               +.+++.+++.|+.||+.||.|||+++||||||||+||||+
T Consensus       113 ~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~  192 (329)
T 4aoj_A          113 TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG  192 (329)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC
Confidence            9999999999999999999998753               3589999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCccccccc---------chhheeeccCcccc
Q 023430          250 SDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       250 ~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      .++.+||+|||+|+....         ..||+.|||||++.
T Consensus       193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~  233 (329)
T 4aoj_A          193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL  233 (329)
T ss_dssp             TTTEEEECCCC----------------CCCCGGGCCHHHHT
T ss_pred             CCCcEEEcccccceeccCCCcceecCcccccccccChhhhc
Confidence            999999999999973211         15789999999874

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.7e-44  Score=312.31  Aligned_cols=173  Identities=17%  Similarity=0.259  Sum_probs=146.1

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..+++++.++||+|+||+||+|++.+..+...+..||||+++...  .....+.|.+|+.+|++++|||||++++++.
T Consensus        22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~   99 (308)
T 4gt4_A           22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVT   99 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence            45567899999999999999999998766555677889999997543  2334567999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD  249 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~  249 (282)
                      ..+.++||||||++|+|.+++...                ..+++.++..++.||+.||.|||+++||||||||+||||+
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence            999999999999999999999643                3588999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCccccccc---------chhheeeccCccc
Q 023430          250 SDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       250 ~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      +++.+||+|||+|+....         ..||+.|||||++
T Consensus       180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l  219 (308)
T 4gt4_A          180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI  219 (308)
T ss_dssp             GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHH
T ss_pred             CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHH
Confidence            999999999999974221         1568999999986

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.6e-44  Score=310.37  Aligned_cols=168  Identities=21%  Similarity=0.252  Sum_probs=145.9

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeE
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRY  182 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~  182 (282)
                      ..|.+..+++++.++||+|+||+||+|++++        .||||+++... ......+.|.+|+.+|++++|||||++++
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~--------~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g   99 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG--------DVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMG   99 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESSS--------EEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC--------cEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            3467888999999999999999999998652        48999987543 23445677999999999999999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      ++. ++.+|||||||+||+|.+++... ..+++.++..|+.||+.||.|||+++||||||||+||||++++.+||+|||+
T Consensus       100 ~~~-~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGl  178 (307)
T 3omv_A          100 YMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGL  178 (307)
T ss_dssp             EEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSS
T ss_pred             EEE-CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccC
Confidence            875 45689999999999999999764 5699999999999999999999999999999999999999999999999999


Q ss_pred             ccccc---------cchhheeeccCccc
Q 023430          262 SHNQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~---------~~~~~~~~~ape~~  280 (282)
                      |+...         ...||+.|||||++
T Consensus       179 a~~~~~~~~~~~~~~~~GT~~ymAPE~l  206 (307)
T 3omv_A          179 ATVKSRWSGSQQVEQPTGSVLWMAPEVI  206 (307)
T ss_dssp             CBC------------CCCCTTSCCHHHH
T ss_pred             ceecccCCcceeecccccCCCccCHHHh
Confidence            96321         11689999999987

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.9e-44  Score=307.19  Aligned_cols=165  Identities=26%  Similarity=0.329  Sum_probs=137.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS-  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-  188 (282)
                      ++|++++.||+|+||+||+|+++     .+++.||||++....  .....+.+.+|+.+|+.++|||||+++++|...+ 
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~   77 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNK-----VDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNT   77 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEET-----TTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-
T ss_pred             hhCEEeeEEecCCCeEEEEEEEC-----CCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCc
Confidence            36999999999999999999987     456789999997543  2334567889999999999999999999987654 


Q ss_pred             -----------EEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcE
Q 023430          189 -----------KLYLILDFINGGHLFFHLYRQGI---FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV  254 (282)
Q Consensus       189 -----------~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v  254 (282)
                                 .+|||||||++|+|.+++.....   ..+..++.++.||+.||+|||++|||||||||+||||+.+|.+
T Consensus        78 ~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~v  157 (299)
T 4g31_A           78 TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVV  157 (299)
T ss_dssp             ---------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             cccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcE
Confidence                       37999999999999999987654   3456788999999999999999999999999999999999999


Q ss_pred             EEEecCccccccc-------------------chhheeeccCcccc
Q 023430          255 MAAHSLNSHNQLC-------------------CFFFFLFLGGGVFN  281 (282)
Q Consensus       255 ~l~Dfg~s~~~~~-------------------~~~~~~~~ape~~~  281 (282)
                      ||+|||+|+....                   ..||+.|||||++.
T Consensus       158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~  203 (299)
T 4g31_A          158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH  203 (299)
T ss_dssp             EECCCCCC--------------------------CCCTTSCHHHHT
T ss_pred             EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHc
Confidence            9999999964221                   14899999999874

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=8.4e-43  Score=325.84  Aligned_cols=171  Identities=36%  Similarity=0.616  Sum_probs=150.6

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHH---HHHHHhcCCCCeeeee
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE---RDILTKVTHPFIVQLR  181 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E---~~~l~~l~h~nIv~l~  181 (282)
                      ..+..++|+++++||+|+||+||+|+++     .+++.||||++.+...........+.+|   +.+++.++|||||+++
T Consensus       184 ~~~slddf~i~k~LG~G~fG~V~la~~~-----~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~  258 (689)
T 3v5w_A          184 IHLTMNDFSVHRIIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS  258 (689)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEE
T ss_pred             CCCchHHeEEEEEEecccCeEEEEEEEC-----CCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEE
Confidence            3567789999999999999999999987     4678999999987665444444444444   5566778899999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      ++|.+.+.+|||||||+||+|..++.+.+.+++..++.|+.||+.||.|||++|||||||||+||||+.+|++||+|||+
T Consensus       259 ~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGl  338 (689)
T 3v5w_A          259 YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL  338 (689)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccce
Confidence            99999999999999999999999999989999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc-----cchhheeeccCccc
Q 023430          262 SHNQL-----CCFFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~-----~~~~~~~~~ape~~  280 (282)
                      |+...     ...||+.|||||++
T Consensus       339 A~~~~~~~~~t~~GTp~YmAPEvl  362 (689)
T 3v5w_A          339 ACDFSKKKPHASVGTHGYMAPEVL  362 (689)
T ss_dssp             CEECSSCCCCSCCSCGGGCCHHHH
T ss_pred             eeecCCCCCCCccCCcCccCHHHH
Confidence            96322     22789999999987

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=5e-43  Score=308.27  Aligned_cols=176  Identities=19%  Similarity=0.274  Sum_probs=151.9

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC-CCeeeee
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH-PFIVQLR  181 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~  181 (282)
                      ..|.+..++|++.+.||+|+||+||+|+++++......+.||||++....  .....+.+.+|+.+|++++| ||||+++
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~  134 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLL  134 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence            34678888999999999999999999999887666677889999997653  23345678899999999975 8999999


Q ss_pred             EEEEeC-CEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCC
Q 023430          182 YSFQTR-SKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPE  244 (282)
Q Consensus       182 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~  244 (282)
                      +++... +.+|||||||++|+|.+++...                ..+++.+++.++.||+.||.|||+++||||||||+
T Consensus       135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~  214 (353)
T 4ase_A          135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  214 (353)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcc
Confidence            998764 5789999999999999999753                34789999999999999999999999999999999


Q ss_pred             ceEEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          245 NILMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       245 NILl~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      |||+++++.+||+|||+|+....+         .||+.|||||++
T Consensus       215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l  259 (353)
T 4ase_A          215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  259 (353)
T ss_dssp             GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH
T ss_pred             ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHH
Confidence            999999999999999999742211         468899999987

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.5e-42  Score=306.40  Aligned_cols=164  Identities=17%  Similarity=0.324  Sum_probs=144.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--  187 (282)
                      ++|++++.||+|+||+||+|+++     .+++.||||++++... .....+.+.+|+.+|+.++|||||++++++...  
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~-----~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  127 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRR-----LTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVP  127 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSC
T ss_pred             CCeEEEEEEecccCeEEEEEEEC-----CCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccc
Confidence            57999999999999999999987     4678899999976542 233456688999999999999999999987643  


Q ss_pred             ----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          188 ----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                          +.+|||||||+ |+|.+++.+.+.+++.+++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+
T Consensus       128 ~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          128 YGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR  206 (398)
T ss_dssp             TTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             cccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceee
Confidence                57999999996 6799999888889999999999999999999999999999999999999999999999999996


Q ss_pred             ccc-----------cchhheeeccCccc
Q 023430          264 NQL-----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~-----------~~~~~~~~~ape~~  280 (282)
                      ...           .-.||+.|||||++
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~  234 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPELM  234 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHHH
T ss_pred             ecccCccccccccccceeChHhcCHHHh
Confidence            321           12689999999986

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.7e-41  Score=290.74  Aligned_cols=158  Identities=23%  Similarity=0.265  Sum_probs=133.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS--  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--  188 (282)
                      +|.+.++||+|+||+||+|+++       +..||||++.....    .......|+..+..++|||||++++++...+  
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~-------g~~VAvK~l~~~~~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~   72 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWR-------GEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGT   72 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET-------TEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred             EEEEEEEEeeCCCeEEEEEEEC-------CEEEEEEEECccch----hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCC
Confidence            6899999999999999999864       46799999865431    1122345666677899999999999998654  


Q ss_pred             --EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeeccCCCceEEcCCCcEEEEe
Q 023430          189 --KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC--------GIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       189 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~--------~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                        .+|||||||++|+|.+++... .+++..+..++.|++.||.|||++        +||||||||+||||+.++.+||+|
T Consensus        73 ~~~~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D  151 (303)
T 3hmm_A           73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred             ceEEEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence              689999999999999999754 589999999999999999999987        899999999999999999999999


Q ss_pred             cCccccccc-----------chhheeeccCccc
Q 023430          259 SLNSHNQLC-----------CFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~~-----------~~~~~~~~ape~~  280 (282)
                      ||+|+....           ..||+.|||||++
T Consensus       152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l  184 (303)
T 3hmm_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL  184 (303)
T ss_dssp             CTTCEEEETTTTEESCC-----CCGGGCCHHHH
T ss_pred             CCCCccccCCCCceeeecccccccccccCHHHh
Confidence            999863211           1589999999987

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=4.7e-40  Score=290.71  Aligned_cols=145  Identities=21%  Similarity=0.334  Sum_probs=128.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  187 (282)
                      .+.|++.++||+|+||+||+|+++..  ..+++.||+|++.+..     ....+.+|+++|+.+ +|||||+++++|.+.
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~--~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQ--VGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBT--TSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred             cCcEEEEEEEecccCcEEEEEEEccc--CCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence            35799999999999999999987531  1356789999886542     234577899999998 599999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-CcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-GHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-~~v~l~Dfg~s~  263 (282)
                      +.+|||||||+||+|.+++.   .+++.+++.++.||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            99999999999999999883   58999999999999999999999999999999999999877 899999999996

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.1e-39  Score=304.57  Aligned_cols=165  Identities=24%  Similarity=0.389  Sum_probs=146.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||+||+|+++     .+++.||+|++.....   ...+.+.+|+.+|+.++|||||+++++|.+.+
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~-----~tg~~~AiK~i~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  227 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTER-----ATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN  227 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCSH---HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS
T ss_pred             ccccEEEEEEeeccCeEEEEEEEC-----CCCCEEEEEEEeccch---hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            368999999999999999999987     4677899999976532   23456889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC--CcEEEEecCccccc
Q 023430          189 KLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD--GHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~--~~v~l~Dfg~s~~~  265 (282)
                      .+|||||||+||+|.+++.. .+.+++.+++.+++||+.||.|||++||+||||||+|||++.+  |.+||+|||+|+..
T Consensus       228 ~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          228 EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             EEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred             EEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence            99999999999999999864 4579999999999999999999999999999999999999854  89999999999742


Q ss_pred             cc------chhheeeccCcccc
Q 023430          266 LC------CFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~------~~~~~~~~ape~~~  281 (282)
                      ..      ..||+.|||||++.
T Consensus       308 ~~~~~~~~~~GT~~y~APEv~~  329 (573)
T 3uto_A          308 DPKQSVKVTTGTAEFAAPEVAE  329 (573)
T ss_dssp             CTTSEEEEECSSGGGCCHHHHT
T ss_pred             cCCCceeeeEECccccCHHHhC
Confidence            21      26899999999874

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=4.2e-38  Score=276.29  Aligned_cols=170  Identities=39%  Similarity=0.705  Sum_probs=153.0

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++++.||+|+||.||+|+++     .+++.||+|++.+.........+.+.+|+.+|+.++||||+++++++..
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~   76 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT   76 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe
Confidence            34578999999999999999999977     4577899999987765555566778899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+.+|+||||++||+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus        77 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  156 (337)
T 1o6l_A           77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence            99999999999999999999888889999999999999999999999999999999999999999999999999997422


Q ss_pred             c-------chhheeeccCcccc
Q 023430          267 C-------CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~-------~~~~~~~~ape~~~  281 (282)
                      .       ..||+.|||||++.
T Consensus       157 ~~~~~~~~~~gt~~y~aPE~~~  178 (337)
T 1o6l_A          157 SDGATMKTFCGTPEYLAPEVLE  178 (337)
T ss_dssp             CTTCCBCCCEECGGGCCGGGGS
T ss_pred             cCCCcccccccChhhCChhhhc
Confidence            1       25799999999873

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=3.5e-38  Score=278.49  Aligned_cols=171  Identities=38%  Similarity=0.724  Sum_probs=150.5

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      ..+..++|+++++||+|+||.||+|+++     .+++.||||++.+.........+.+.+|+.+++.+ +||||++++++
T Consensus        18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~   92 (353)
T 3txo_A           18 NRLGIDNFEFIRVLGKGSFGKVMLARVK-----ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCC   92 (353)
T ss_dssp             -----CCEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             CCCchhheEEEEEEeeCCCEEEEEEEEc-----CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEE
Confidence            3456789999999999999999999987     45778999999887655566667788899999988 69999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +.+.+.+|+||||++||+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+
T Consensus        93 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~  172 (353)
T 3txo_A           93 FQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK  172 (353)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEcccccee
Confidence            99999999999999999999999888889999999999999999999999999999999999999999999999999997


Q ss_pred             ccccc-------hhheeeccCccc
Q 023430          264 NQLCC-------FFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~~~-------~~~~~~~ape~~  280 (282)
                      .....       .||+.|||||++
T Consensus       173 ~~~~~~~~~~~~~gt~~y~aPE~~  196 (353)
T 3txo_A          173 EGICNGVTTATFCGTPDYIAPEIL  196 (353)
T ss_dssp             CSCC---------CCGGGCCHHHH
T ss_pred             ecccCCccccccCCCcCeEChhhc
Confidence            53222       579999999986

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=4.6e-38  Score=281.36  Aligned_cols=172  Identities=36%  Similarity=0.707  Sum_probs=150.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      ..+..++|+++++||+|+||.||+|+++     .+++.||+|++++.........+.+.+|+.+++.+ +||||++++++
T Consensus        47 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~-----~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~  121 (396)
T 4dc2_A           47 SSLGLQDFDLLRVIGRGSYAKVLLVRLK-----KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC  121 (396)
T ss_dssp             --CCGGGEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             cCCChhHcEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEE
Confidence            3456779999999999999999999987     45778999999877655555556688899999887 79999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +.+.+.+|+||||++||+|..++.+.+.+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+
T Consensus       122 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~  201 (396)
T 4dc2_A          122 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK  201 (396)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceee
Confidence            99999999999999999999999888889999999999999999999999999999999999999999999999999997


Q ss_pred             cccc-------chhheeeccCcccc
Q 023430          264 NQLC-------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~-------~~~~~~~~ape~~~  281 (282)
                      ....       ..||+.|||||++.
T Consensus       202 ~~~~~~~~~~~~~gt~~Y~aPE~l~  226 (396)
T 4dc2_A          202 EGLRPGDTTSTFCGTPNYIAPEILR  226 (396)
T ss_dssp             CCCCTTCCBCCCCBCGGGCCHHHHT
T ss_pred             ecccCCCccccccCCcccCCchhhc
Confidence            4221       26799999999873

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.7e-37  Score=276.71  Aligned_cols=171  Identities=34%  Similarity=0.616  Sum_probs=154.6

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++++.||+|+||.||+|+++     .+++.||+|++.+.........+.+.+|+.+|+.++||||+++++++.
T Consensus        11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~-----~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~   85 (384)
T 4fr4_A           11 DVNFDHFEILRAIGKGSFGKVCIVQKN-----DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ   85 (384)
T ss_dssp             CCCGGGEEEEEEEECCTTCCEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            455678999999999999999999987     457789999998776556666777889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      +...+|+||||+.||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...
T Consensus        86 ~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A           86 DEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             eCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence            99999999999999999999988888999999999999999999999999999999999999999999999999999632


Q ss_pred             ------ccchhheeeccCcccc
Q 023430          266 ------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ------~~~~~~~~~~ape~~~  281 (282)
                            ....||+.|||||++.
T Consensus       166 ~~~~~~~~~~gt~~Y~aPE~~~  187 (384)
T 4fr4_A          166 PRETQITTMAGTKPYMAPEMFS  187 (384)
T ss_dssp             CTTCCBCCCCSCGGGCCGGGTC
T ss_pred             cCCCceeccCCCccccCCeeec
Confidence                  1226799999999873

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=2.7e-37  Score=271.99  Aligned_cols=170  Identities=37%  Similarity=0.718  Sum_probs=152.8

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~  184 (282)
                      .+..++|++++.||+|+||.||+|+++     .+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++++
T Consensus         5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~   79 (345)
T 3a8x_A            5 PLGLQDFDLLRVIGRGSYAKVLLVRLK-----KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF   79 (345)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             CCchhheEEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE
Confidence            345678999999999999999999987     45778999999877655556667788999999987 899999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+.+.+|+||||+++|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++.
T Consensus        80 ~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~  159 (345)
T 3a8x_A           80 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  159 (345)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecccccc
Confidence            99999999999999999999998888899999999999999999999999999999999999999999999999999974


Q ss_pred             cc-------cchhheeeccCccc
Q 023430          265 QL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~-------~~~~~~~~~ape~~  280 (282)
                      ..       ...||+.|||||++
T Consensus       160 ~~~~~~~~~~~~gt~~y~aPE~~  182 (345)
T 3a8x_A          160 GLRPGDTTSTFCGTPNYIAPEIL  182 (345)
T ss_dssp             SCCTTCCBCCCCSCGGGCCHHHH
T ss_pred             ccCCCCcccccCCCccccCcccc
Confidence            22       12679999999986

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1e-37  Score=282.45  Aligned_cols=172  Identities=35%  Similarity=0.623  Sum_probs=152.3

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      ...+..++|+++++||+|+||+||+|+++     ..++.||+|++.+.........+.+.+|+.+++.++||||++++++
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  142 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLK-----NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA  142 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEc-----CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            34566789999999999999999999987     4567899999987554444444557889999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +.+.+.+|+|||||+||+|.+++.+ .+.+++..++.++.|++.||.|||++|||||||||+|||++.+|.+||+|||+|
T Consensus       143 ~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla  222 (437)
T 4aw2_A          143 FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC  222 (437)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence            9999999999999999999999987 467999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc--------chhheeeccCccc
Q 023430          263 HNQLC--------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~--------~~~~~~~~ape~~  280 (282)
                      +....        ..||+.|||||++
T Consensus       223 ~~~~~~~~~~~~~~~GT~~Y~APE~l  248 (437)
T 4aw2_A          223 LKLMEDGTVQSSVAVGTPDYISPEIL  248 (437)
T ss_dssp             EECCTTSCEECCSCCSCGGGCCHHHH
T ss_pred             hhcccCCCcccccccCCcCeeChHHH
Confidence            53221        2689999999986

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.5e-37  Score=272.09  Aligned_cols=170  Identities=32%  Similarity=0.623  Sum_probs=150.4

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~  184 (282)
                      .+..++|++.+.||+|+||.||+|+++     .+++.||||++++.........+.+..|..+++.+ +||||+++++++
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~   87 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFK-----KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF   87 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE
Confidence            456789999999999999999999987     45778999999876554455566778899999876 899999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+.+.+|+||||++||+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.
T Consensus        88 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           88 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            99999999999999999999998888899999999999999999999999999999999999999999999999999974


Q ss_pred             cc-------cchhheeeccCccc
Q 023430          265 QL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~-------~~~~~~~~~ape~~  280 (282)
                      ..       ...||+.|||||++
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~  190 (345)
T 1xjd_A          168 NMLGDAKTNTFCGTPDYIAPEIL  190 (345)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHH
T ss_pred             cccCCCcccCCCCCcccCChhhh
Confidence            22       12679999999986

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2e-37  Score=269.91  Aligned_cols=169  Identities=34%  Similarity=0.604  Sum_probs=152.1

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+|+.+     .+++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~   78 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSR-----HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA   78 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC
Confidence            4568999999999999999999976     45778999999876554445567788999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ..+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.... 
T Consensus        79 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           79 QQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             CEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            9999999999999999999988889999999999999999999999999999999999999999999999999996422 


Q ss_pred             ---cchhheeeccCcccc
Q 023430          267 ---CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ---~~~~~~~~~ape~~~  281 (282)
                         ...||+.|||||++.
T Consensus       159 ~~~~~~gt~~y~aPE~~~  176 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVS  176 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHT
T ss_pred             ccccccCCccccCHhHhc
Confidence               236799999999863

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=4.1e-37  Score=269.02  Aligned_cols=167  Identities=30%  Similarity=0.430  Sum_probs=149.8

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++++.||+|+||.||+|++.     .+++.||||++.+... .....+.+.+|+.+|+.++||||+++++++...
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~   86 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHI-----LTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETE   86 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            3578999999999999999999986     4567899999977543 334456788999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      +.+|+||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.... 
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A           87 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred             CEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence            9999999999999999999888889999999999999999999999999999999999999999999999999996321 


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...|++.|+|||.+
T Consensus       167 ~~~~~~~~gt~~y~aPE~~  185 (328)
T 3fe3_A          167 GGKLDAFCGAPPYAAPELF  185 (328)
T ss_dssp             SCGGGTTSSSGGGCCHHHH
T ss_pred             CCccccccCCcceeCcccc
Confidence                 22679999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=3.2e-37  Score=272.07  Aligned_cols=171  Identities=34%  Similarity=0.602  Sum_probs=154.0

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      .....++|++++.||+|+||.||+|+++     .+++.||+|++.+.........+.+.+|+.+|+.++||||+++++++
T Consensus        36 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  110 (350)
T 1rdq_E           36 NTAQLDQFDRIKTLGTGSFGRVMLVKHK-----ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF  110 (350)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cCCCHHHCEEEEEeecCcCcEEEEEEEC-----CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            3456679999999999999999999987     45678999999877655555667788999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+...+|+||||++||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.
T Consensus       111 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEccccccee
Confidence            99999999999999999999998888899999999999999999999999999999999999999999999999999964


Q ss_pred             cc----cchhheeeccCccc
Q 023430          265 QL----CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~----~~~~~~~~~ape~~  280 (282)
                      ..    ...||+.|||||++
T Consensus       191 ~~~~~~~~~gt~~y~aPE~~  210 (350)
T 1rdq_E          191 VKGRTWTLCGTPEALAPEII  210 (350)
T ss_dssp             CSSCBCCCEECGGGCCHHHH
T ss_pred             ccCCcccccCCccccCHHHh
Confidence            22    22679999999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-37  Score=277.91  Aligned_cols=173  Identities=36%  Similarity=0.607  Sum_probs=153.0

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      ...+..++|+++++||+|+||.||+|+++     .+++.||||++.+.........+.+.+|+.++..++||||++++++
T Consensus        55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~-----~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  129 (412)
T 2vd5_A           55 EVRLQRDDFEILKVIGRGAFSEVAVVKMK-----QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA  129 (412)
T ss_dssp             HHSCCGGGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             hccCChhhEEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence            44567789999999999999999999987     4677899999987654444455568889999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +.+.+.+|+||||++||+|..++.+. ..+++..++.++.||+.||.|||++|||||||||+|||++.+|++||+|||+|
T Consensus       130 ~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla  209 (412)
T 2vd5_A          130 FQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSC  209 (412)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhh
Confidence            99999999999999999999999875 47999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc--------chhheeeccCcccc
Q 023430          263 HNQLC--------CFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~~--------~~~~~~~~ape~~~  281 (282)
                      +....        ..||+.|||||++.
T Consensus       210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~  236 (412)
T 2vd5_A          210 LKLRADGTVRSLVAVGTPDYLSPEILQ  236 (412)
T ss_dssp             EECCTTSCEECSSCCSCGGGCCHHHHH
T ss_pred             eeccCCCccccceeccccCcCCHHHHh
Confidence            63221        26899999999863

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=3.1e-37  Score=272.36  Aligned_cols=171  Identities=33%  Similarity=0.639  Sum_probs=151.7

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~  184 (282)
                      .+..++|++++.||+|+||.||+|+++     .+++.||||++.+.........+.+..|..++..+ +||||+++++++
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~   90 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERK-----GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF   90 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEET-----TEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE
Confidence            456789999999999999999999987     45778999999887655555667788899999887 799999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+.+.+|+||||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus        91 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A           91 QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence            99999999999999999999998888899999999999999999999999999999999999999999999999999975


Q ss_pred             cc-------cchhheeeccCcccc
Q 023430          265 QL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~-------~~~~~~~~~ape~~~  281 (282)
                      ..       ...||+.|||||++.
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~  194 (353)
T 2i0e_A          171 NIWDGVTTKTFCGTPDYIAPEIIA  194 (353)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHT
T ss_pred             cccCCcccccccCCccccChhhhc
Confidence            22       125799999999863

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=2.3e-37  Score=278.09  Aligned_cols=173  Identities=34%  Similarity=0.596  Sum_probs=151.8

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeE
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRY  182 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~  182 (282)
                      ....+..++|+++++||+|+||.||+|+++     .+++.||+|++.+.........+.+.+|+.+++.++||||+++++
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~-----~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~  136 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHK-----STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY  136 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEEC-----CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            345567789999999999999999999987     456789999998755444444455788999999999999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ++.+...+|+|||||+||+|.+++.. ..+++..++.++.||+.||.|||++|||||||||+|||++.+|++||+|||+|
T Consensus       137 ~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a  215 (410)
T 3v8s_A          137 AFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC  215 (410)
T ss_dssp             EEECSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEecccee
Confidence            99999999999999999999998865 46899999999999999999999999999999999999999999999999999


Q ss_pred             cccc--------cchhheeeccCcccc
Q 023430          263 HNQL--------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~--------~~~~~~~~~ape~~~  281 (282)
                      +...        ...||+.|||||++.
T Consensus       216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~  242 (410)
T 3v8s_A          216 MKMNKEGMVRCDTAVGTPDYISPEVLK  242 (410)
T ss_dssp             EECCTTSEEECCSCCSCGGGCCHHHHH
T ss_pred             EeeccCCcccccCCcCCccccCHHHhh
Confidence            5321        226899999999863

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=4.1e-37  Score=273.47  Aligned_cols=169  Identities=45%  Similarity=0.766  Sum_probs=141.0

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHH-HHhcCCCCeeeeeEEEEe
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI-LTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~  186 (282)
                      ..++|++++.||+|+||.||+|+++     .++..||||++.+.........+.+.+|..+ ++.++||||+++++++.+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~  110 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHK-----AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT  110 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEET-----TTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEc-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe
Confidence            3468999999999999999999987     4567899999987765444455556677776 577899999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+.+|+||||++||+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++...
T Consensus       111 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          111 ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            99999999999999999999888889999999999999999999999999999999999999999999999999997522


Q ss_pred             c-------chhheeeccCcccc
Q 023430          267 C-------CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~-------~~~~~~~~ape~~~  281 (282)
                      .       ..||+.|||||++.
T Consensus       191 ~~~~~~~~~~gt~~y~aPE~~~  212 (373)
T 2r5t_A          191 EHNSTTSTFCGTPEYLAPEVLH  212 (373)
T ss_dssp             CCCCCCCSBSCCCCCCCHHHHT
T ss_pred             cCCCccccccCCccccCHHHhC
Confidence            1       26799999999863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.4e-36  Score=260.15  Aligned_cols=168  Identities=21%  Similarity=0.260  Sum_probs=148.9

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+|++.     ..+..||+|++...........+.+.+|+.+++.++||||+++++++...
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~   83 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDT-----ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED   83 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEET-----TTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS
T ss_pred             hhccEEEEEEEccCCCEEEEEEEEC-----CCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC
Confidence            3468999999999999999999976     45678999998765544555667889999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      +..|+||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           84 DCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred             CeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence            99999999999999999998888899999999999999999999999999999999999999999999999999963221


Q ss_pred             --------chhheeeccCccc
Q 023430          268 --------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 --------~~~~~~~~ape~~  280 (282)
                              ..|++.|||||.+
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~  184 (294)
T 4eqm_A          164 TSLTQTNHVLGTVQYFSPEQA  184 (294)
T ss_dssp             -----------CCSSCCHHHH
T ss_pred             ccccccCccccCccccCHhHh
Confidence                    1579999999976

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.1e-36  Score=265.30  Aligned_cols=167  Identities=27%  Similarity=0.387  Sum_probs=149.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.+.     .++..||+|++.+.........+.+.+|+.+++.++||||+++++++....
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   82 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHY-----KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT   82 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cCCEEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC
Confidence            478999999999999999999986     456789999998765444444567889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc---
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ---  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~---  265 (282)
                      ..++||||+ +|+|.+++...+.+++.+++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++...   
T Consensus        83 ~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~  161 (336)
T 3h4j_B           83 DIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG  161 (336)
T ss_dssp             EEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred             EEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence            999999999 6899999988888999999999999999999999999999999999999999999999999998632   


Q ss_pred             ---ccchhheeeccCcccc
Q 023430          266 ---LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ---~~~~~~~~~~ape~~~  281 (282)
                         ....|++.|+|||.+.
T Consensus       162 ~~~~~~~gt~~y~aPE~~~  180 (336)
T 3h4j_B          162 NFLKTSCGSPNYAAPEVIN  180 (336)
T ss_dssp             BTTCCCTTSTTTSCGGGSC
T ss_pred             cccccccCCcCcCCHHHHc
Confidence               2226799999999873

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.6e-36  Score=265.61  Aligned_cols=168  Identities=28%  Similarity=0.402  Sum_probs=148.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh---hHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK---NHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+.|++.+.||+|+||.||+|+++     .++..||+|++.+......   ...+.+.+|+.+|+.++||||+++++++.
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~   85 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREK-----STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE   85 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEEC-----CCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE
Confidence            357999999999999999999987     4567899999986543221   13466889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC----cEEEEecCc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG----HVMAAHSLN  261 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~----~v~l~Dfg~  261 (282)
                      ....+|+||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++    .+||+|||+
T Consensus        86 ~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~  165 (361)
T 2yab_A           86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (361)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence            9999999999999999999998888899999999999999999999999999999999999998877    799999999


Q ss_pred             ccccc------cchhheeeccCcccc
Q 023430          262 SHNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~~------~~~~~~~~~ape~~~  281 (282)
                      +....      ...|++.|||||++.
T Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~  191 (361)
T 2yab_A          166 AHEIEDGVEFKNIFGTPEFVAPEIVN  191 (361)
T ss_dssp             CEECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred             ceEcCCCCccccCCCCccEECchHHc
Confidence            96422      226899999999874

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=7e-36  Score=277.52  Aligned_cols=172  Identities=35%  Similarity=0.586  Sum_probs=152.8

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.++||+|+||.||+|+++     .+++.||+|++.+.........+.+.+|+.+|+.++||||+++++++
T Consensus       179 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~-----~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~  253 (576)
T 2acx_A          179 QPVTKNTFRQYRVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY  253 (576)
T ss_dssp             SCCCGGGEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCccccceEEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE
Confidence            3466788999999999999999999987     45778999999876655555566788999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .+.+.+|+||||++||+|..++...+.  +++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||++
T Consensus       254 ~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla  333 (576)
T 2acx_A          254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA  333 (576)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccc
Confidence            999999999999999999999876543  899999999999999999999999999999999999999999999999999


Q ss_pred             ccc------ccchhheeeccCcccc
Q 023430          263 HNQ------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~------~~~~~~~~~~ape~~~  281 (282)
                      ...      ....||+.|||||++.
T Consensus       334 ~~~~~~~~~~~~~GT~~Y~APEvl~  358 (576)
T 2acx_A          334 VHVPEGQTIKGRVGTVGYMAPEVVK  358 (576)
T ss_dssp             EECCTTCCEECCCSCGGGCCHHHHT
T ss_pred             eecccCccccccCCCccccCHHHHc
Confidence            642      1236799999999873

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.9e-36  Score=275.42  Aligned_cols=170  Identities=40%  Similarity=0.702  Sum_probs=142.8

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++++.||+|+||.||+|+++     ..+..||||++.............+.+|+.+++.++||||+++++++.
T Consensus       144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~  218 (446)
T 4ejn_A          144 RVTMNEFEYLKLLGKGTFGKVILVKEK-----ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ  218 (446)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE
T ss_pred             CCChHHcEEeEEEeeCcCEEEEEEEEc-----CCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe
Confidence            445678999999999999999999977     457789999998765545555666788999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ..+.+|+||||+++|+|..++...+.+++..+..++.||+.||.|||+ +|||||||||+|||++.++.+||+|||+|+.
T Consensus       219 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          219 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE  298 (446)
T ss_dssp             ETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred             eCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence            999999999999999999999888889999999999999999999998 9999999999999999999999999999974


Q ss_pred             ccc-------chhheeeccCccc
Q 023430          265 QLC-------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~-------~~~~~~~~ape~~  280 (282)
                      ...       ..||+.|||||++
T Consensus       299 ~~~~~~~~~~~~gt~~y~aPE~~  321 (446)
T 4ejn_A          299 GIKDGATMKTFCGTPEYLAPEVL  321 (446)
T ss_dssp             TCC-----CCSSSCGGGCCHHHH
T ss_pred             ccCCCcccccccCCccccCHhhc
Confidence            222       2579999999986

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=6.1e-36  Score=261.43  Aligned_cols=173  Identities=46%  Similarity=0.774  Sum_probs=142.4

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh-hhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII-KKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      .+..++|++.+.||+|+||.||+|++...  ...++.||+|++.+.... .......+.+|+.+|+.++||||+++++++
T Consensus        13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   90 (327)
T 3a62_A           13 KIRPECFELLRVLGKGGYGKVFQVRKVTG--ANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF   90 (327)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEECSS--TTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCHHHeEEEEEEEeCCCEEEEEEEEecc--CCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE
Confidence            45567899999999999999999987521  246788999999765422 122345577899999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ...+.+|+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A           91 QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             ECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             EcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence            99999999999999999999998888899999999999999999999999999999999999999999999999999864


Q ss_pred             ccc-------chhheeeccCccc
Q 023430          265 QLC-------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~-------~~~~~~~~ape~~  280 (282)
                      ...       ..|++.|||||.+
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~  193 (327)
T 3a62_A          171 SIHDGTVTHTFCGTIEYMAPEIL  193 (327)
T ss_dssp             --------CTTSSCCTTSCHHHH
T ss_pred             cccCCccccccCCCcCccCHhhC
Confidence            321       2579999999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2e-35  Score=255.88  Aligned_cols=167  Identities=20%  Similarity=0.325  Sum_probs=147.6

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.++||+|+||.||+|.++     .++..||+|++...   .....+.+.+|+.+++.++||||+++++++..
T Consensus         7 ~~~~~~~~~~~lG~G~~g~V~~~~~~-----~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   78 (310)
T 3s95_A            7 FRPSDLIHGEVLGKGCFGQAIKVTHR-----ETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK   78 (310)
T ss_dssp             ECGGGEEEEEEEECCSSEEEEEEEET-----TTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             eChhHeeccceecCCCCEEEEEEEEC-----CCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEec
Confidence            34578999999999999999999987     45678999988543   23455678899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .+..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A           79 DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLM  158 (310)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred             CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceec
Confidence            9999999999999999999987 466899999999999999999999999999999999999999999999999999632


Q ss_pred             c---------------------cchhheeeccCcccc
Q 023430          266 L---------------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~---------------------~~~~~~~~~ape~~~  281 (282)
                      .                     ...|++.|||||.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (310)
T 3s95_A          159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN  195 (310)
T ss_dssp             C--------------------CCCCSCGGGCCHHHHT
T ss_pred             ccccccccccccccccccccccccCCCcceeCHHHhc
Confidence            1                     225789999999863

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=9.2e-36  Score=264.62  Aligned_cols=174  Identities=17%  Similarity=0.257  Sum_probs=148.0

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCC--CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      +.+..++|++.+.||+|+||.||+|++.+...  ...+..||||+++...  .....+.+.+|+.+|+.+ +||||++++
T Consensus        76 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~  153 (370)
T 2psq_A           76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL  153 (370)
T ss_dssp             TBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             ccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence            44556789999999999999999999864322  2345679999997653  334456788999999999 899999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      +++...+.+|+||||+++|+|.+++....                .+++.++..++.||+.||.|||++||+||||||+|
T Consensus       154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence            99999999999999999999999997643                47889999999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCcccccc---------cchhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~---------~~~~~~~~~ape~~  280 (282)
                      ||++.++.+||+|||+++...         ...+++.|||||++
T Consensus       234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~  277 (370)
T 2psq_A          234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL  277 (370)
T ss_dssp             EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH
T ss_pred             EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHh
Confidence            999999999999999996321         12446789999976

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=8.5e-36  Score=283.43  Aligned_cols=171  Identities=33%  Similarity=0.638  Sum_probs=151.4

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~  184 (282)
                      .+..++|+++++||+|+||.||+|+++     .+++.||||++++.........+.+..|..+|..+ +|++|+++++++
T Consensus       337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~  411 (674)
T 3pfq_A          337 RMKLTDFNFLMVLGKGSFGKVMLSERK-----GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF  411 (674)
T ss_dssp             ---CTTEEEEEESSBTTTBCEEEEEES-----SSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC
T ss_pred             cccccceEEEEEEccCCCEEEEEEEEC-----CCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE
Confidence            456789999999999999999999987     45678999999876555555566788899999887 699999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+.+.+||||||++||+|..++...+.+++..++.++.||+.||.|||++|||||||||+||||+.+|++||+|||+|+.
T Consensus       412 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          412 QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             BCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             EeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            99999999999999999999999888899999999999999999999999999999999999999999999999999974


Q ss_pred             ccc-------chhheeeccCcccc
Q 023430          265 QLC-------CFFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~-------~~~~~~~~ape~~~  281 (282)
                      ...       -.||+.|||||++.
T Consensus       492 ~~~~~~~~~~~~GT~~Y~APE~l~  515 (674)
T 3pfq_A          492 NIWDGVTTKTFCGTPDYIAPEIIA  515 (674)
T ss_dssp             CCCTTCCBCCCCSCSSSCCHHHHT
T ss_pred             cccCCcccccccCCCcccCHhhhc
Confidence            322       15799999999874

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.5e-35  Score=274.31  Aligned_cols=172  Identities=37%  Similarity=0.583  Sum_probs=152.8

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.++||+|+||.||+|+++     .+++.||+|++.+.........+.+.+|+.+|+.++||||+++++++
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~-----~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~  254 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF  254 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEEC-----CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            4567789999999999999999999987     45778999999877655555567788999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      .....+|+||||++||+|..++...    ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||
T Consensus       255 ~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFG  334 (543)
T 3c4z_A          255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG  334 (543)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecc
Confidence            9999999999999999999998764    358999999999999999999999999999999999999999999999999


Q ss_pred             cccccc-------cchhheeeccCcccc
Q 023430          261 NSHNQL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       261 ~s~~~~-------~~~~~~~~~ape~~~  281 (282)
                      ++....       ...||+.|||||++.
T Consensus       335 la~~~~~~~~~~~~~~GT~~Y~APE~l~  362 (543)
T 3c4z_A          335 LAVELKAGQTKTKGYAGTPGFMAPELLL  362 (543)
T ss_dssp             TCEECCTTCCCBCCCCSCTTTSCHHHHT
T ss_pred             eeeeccCCCcccccccCCccccChhhhc
Confidence            996321       126899999999873

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=5.8e-36  Score=273.68  Aligned_cols=171  Identities=26%  Similarity=0.391  Sum_probs=152.8

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|.+.+.||+|+||.||+|+++     .++..||||++.+.........+.+.+|+.+++.++||||+++++++.
T Consensus        12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~-----~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~   86 (476)
T 2y94_A           12 RVKIGHYILGDTLGVGTFGKVKVGKHE-----LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS   86 (476)
T ss_dssp             CCEETTEEEEEEEECCSSSCEEEEEET-----TTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             CceecCEEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            344678999999999999999999977     456789999998765544455677899999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      ..+.+|+||||+++|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        87 ~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~  166 (476)
T 2y94_A           87 TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM  166 (476)
T ss_dssp             CSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence            99999999999999999999988888999999999999999999999999999999999999999999999999999642


Q ss_pred             c------cchhheeeccCcccc
Q 023430          266 L------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~------~~~~~~~~~ape~~~  281 (282)
                      .      ...|++.|+|||.+.
T Consensus       167 ~~~~~~~~~~gt~~y~aPE~~~  188 (476)
T 2y94_A          167 SDGEFLRTSCGSPNYAAPEVIS  188 (476)
T ss_dssp             CTTCCBCCCCSCSTTCCHHHHT
T ss_pred             cccccccccCCCcCeEChhhcc
Confidence            1      226799999999863

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=268.78  Aligned_cols=166  Identities=28%  Similarity=0.408  Sum_probs=145.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|.++     .++..||+|++...... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~-----~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   84 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKV-----LAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGH   84 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEET-----TTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSE
T ss_pred             CCeEEEEEeccCCCeEEEEEEEC-----CCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCE
Confidence            47999999999999999999977     46778999999765432 3345668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc---CCCcEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD---SDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~---~~~~v~l~Dfg~s~~~~  266 (282)
                      .|+|||||.||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++....
T Consensus        85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            999999999999999999888899999999999999999999999999999999999998   46889999999995322


Q ss_pred             -------cchhheeeccCcccc
Q 023430          267 -------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -------~~~~~~~~~ape~~~  281 (282)
                             ...|++.|||||++.
T Consensus       165 ~~~~~~~~~~gt~~Y~APE~l~  186 (444)
T 3soa_A          165 GEQQAWFGFAGTPGYLSPEVLR  186 (444)
T ss_dssp             TTCCBCCCSCSCGGGCCHHHHT
T ss_pred             CCCceeecccCCcccCCHHHhc
Confidence                   126799999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.6e-35  Score=262.41  Aligned_cols=166  Identities=28%  Similarity=0.412  Sum_probs=146.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|.++     .++..||+|++..... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  102 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHK-----TTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESF  102 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCeEEeeEEecCCCeEEEEEEEC-----CCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            46999999999999999999977     4567899999976543 23345678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC---cEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG---HVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~---~v~l~Dfg~s~~~~  266 (282)
                      .|+||||+.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++   .+||+|||++....
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred             EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence            999999999999999998888899999999999999999999999999999999999998654   59999999996422


Q ss_pred             ------cchhheeeccCcccc
Q 023430          267 ------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ------~~~~~~~~~ape~~~  281 (282)
                            ...|++.|||||++.
T Consensus       183 ~~~~~~~~~gt~~y~aPE~~~  203 (362)
T 2bdw_A          183 DSEAWHGFAGTPGYLSPEVLK  203 (362)
T ss_dssp             TCCSCCCSCSCTTTCCHHHHT
T ss_pred             CCcccccCCCCccccCHHHHc
Confidence                  126799999999863

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.3e-35  Score=261.18  Aligned_cols=163  Identities=26%  Similarity=0.420  Sum_probs=140.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||.||+++++     .+++.||+|++......    .+.+.+|+.+++.++||||+++++++....
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   89 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDK-----LTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPT   89 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEET-----TTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CCcEEEEEEeccCCCEEEEEEEEC-----CCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCC
Confidence            468999999999999999999987     45778999999764322    244778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc--EEEEecCcccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH--VMAAHSLNSHNQL  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~--v~l~Dfg~s~~~~  266 (282)
                      .+|+||||+.+|+|..++...+.+++..++.++.|++.||.|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus        90 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~  169 (361)
T 3uc3_A           90 HLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV  169 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred             EEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence            99999999999999999988888999999999999999999999999999999999999987765  9999999986322


Q ss_pred             ------cchhheeeccCccc
Q 023430          267 ------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ------~~~~~~~~~ape~~  280 (282)
                            ...|++.|||||++
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~  189 (361)
T 3uc3_A          170 LHSQPKSTVGTPAYIAPEVL  189 (361)
T ss_dssp             -----------CTTSCHHHH
T ss_pred             ccCCCCCCcCCCCcCChhhh
Confidence                  22679999999986

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2e-35  Score=254.78  Aligned_cols=163  Identities=21%  Similarity=0.308  Sum_probs=144.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.+.     ..++.||+|++.....   ...+.+.+|+.+++.++||||+++++++...+
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   90 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGD   90 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBT-----TTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hhceeeeeeeccCCCeEEEEEEEC-----CCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC
Confidence            457999999999999999999866     4577899999876542   23456788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc---
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ---  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~---  265 (282)
                      ..|+||||+++++|.+++... .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...   
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A           91 ELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             EEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            999999999999999998764 6899999999999999999999999999999999999999999999999998532   


Q ss_pred             ----ccchhheeeccCccc
Q 023430          266 ----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ----~~~~~~~~~~ape~~  280 (282)
                          ....|++.|||||.+
T Consensus       170 ~~~~~~~~gt~~y~aPE~~  188 (297)
T 3fxz_A          170 QSKRSTMVGTPYWMAPEVV  188 (297)
T ss_dssp             TCCBCCCCSCGGGCCHHHH
T ss_pred             ccccCCccCCcCccChhhh
Confidence                122679999999986

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.7e-35  Score=252.96  Aligned_cols=165  Identities=21%  Similarity=0.359  Sum_probs=142.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++++.||+|+||.||+|+++     .+++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   75 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCceeeeEecCCCCeEEEEEEEC-----CCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCE
Confidence            58999999999999999999987     4567899999976542 33445667889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc----
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ----  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~----  265 (282)
                      +++||||++++.+..+....+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...    
T Consensus        76 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           76 LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred             EEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence            9999999987444444444677999999999999999999999999999999999999999999999999999632    


Q ss_pred             ---ccchhheeeccCccc
Q 023430          266 ---LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ---~~~~~~~~~~ape~~  280 (282)
                         ....|++.|||||.+
T Consensus       156 ~~~~~~~~t~~y~aPE~~  173 (292)
T 3o0g_A          156 RCYSAEVVTLWYRPPDVL  173 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHH
T ss_pred             ccccCCccccCCcChHHH
Confidence               122669999999986

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=4.7e-35  Score=261.53  Aligned_cols=168  Identities=20%  Similarity=0.342  Sum_probs=148.4

Q ss_pred             CCCCeEEEeeeCcC--CCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          108 GPGDFEIFRVVGQG--AFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       108 ~~~~y~~~~~lG~G--~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      ..++|+++++||+|  +||.||+|+++     .++..||||++..... .....+.+.+|+.+++.++||||+++++++.
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   96 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYK-----PTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFI   96 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEET-----TTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEc-----CCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE
Confidence            35689999999999  99999999987     4577899999987643 3345677889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ..+.+|+|||||++|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||.+.
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~  176 (389)
T 3gni_B           97 ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL  176 (389)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence            999999999999999999999875  669999999999999999999999999999999999999999999999999874


Q ss_pred             ccc--------------cchhheeeccCcccc
Q 023430          264 NQL--------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~--------------~~~~~~~~~ape~~~  281 (282)
                      ...              ...|++.|||||++.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  208 (389)
T 3gni_B          177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ  208 (389)
T ss_dssp             ECEETTEECSCBCCCCTTCTTTGGGSCHHHHS
T ss_pred             eeccccccccccccccccccccccccCHHHHh
Confidence            221              126788899999863

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3e-35  Score=250.92  Aligned_cols=171  Identities=30%  Similarity=0.442  Sum_probs=151.3

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|+++     ..+..||+|++...........+.+.+|+.+++.++||||+++++++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   79 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREK-----QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH   79 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEc-----cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe
Confidence            445678999999999999999999977     456789999997765544455667889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .....++||||+++++|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             cCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            99999999999999999999988888999999999999999999999999999999999999999999999999988532


Q ss_pred             c-----cchhheeeccCcccc
Q 023430          266 L-----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~-----~~~~~~~~~ape~~~  281 (282)
                      .     ...|++.|+|||.+.
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~  180 (279)
T 3fdn_A          160 PSSRRTDLCGTLDYLPPEMIE  180 (279)
T ss_dssp             --------CCCCTTCCHHHHT
T ss_pred             CcccccccCCCCCccCHhHhc
Confidence            2     226799999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.2e-35  Score=254.93  Aligned_cols=164  Identities=23%  Similarity=0.334  Sum_probs=144.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.++     .++..||+|++....    .....+.+|+.+++.++||||+++++++...+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   74 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVET-----SSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESME   74 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT
T ss_pred             hhceEeeeEEecCCCeEEEEEEEC-----CCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC
Confidence            468999999999999999999977     457789999986542    23355788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC--CCcEEEEecCccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS--DGHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~--~~~v~l~Dfg~s~~~  265 (282)
                      .+++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.  ++.+||+|||++...
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A           75 ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             EEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence            999999999999999999765 36899999999999999999999999999999999999987  789999999999642


Q ss_pred             c------cchhheeeccCcccc
Q 023430          266 L------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~------~~~~~~~~~ape~~~  281 (282)
                      .      ...|++.|||||.+.
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~  176 (321)
T 1tki_A          155 KPGDNFRLLFTAPEYYAPEVHQ  176 (321)
T ss_dssp             CTTCEEEEEESCGGGSCHHHHT
T ss_pred             CCCCccccccCChhhcCcHHhc
Confidence            1      226799999999863

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=6.6e-36  Score=259.19  Aligned_cols=167  Identities=20%  Similarity=0.264  Sum_probs=144.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+++     ..++.||||++...........+.+.+|+.+++.++||||+++++++....
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   85 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDL-----RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET   85 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEEC-----CCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC
Confidence            468999999999999999999976     457789999998765555556677889999999999999999999987643


Q ss_pred             ----EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          189 ----KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       189 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                          ..|+||||+++++|.+++...+.+++.++..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        86 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A           86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             TTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             CCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence                3599999999999999998888899999999999999999999999999999999999999999999999999863


Q ss_pred             ccc----------chhheeeccCccc
Q 023430          265 QLC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~----------~~~~~~~~ape~~  280 (282)
                      ...          ..|++.|||||.+
T Consensus       166 ~~~~~~~~~~~~~~~gt~~y~aPE~~  191 (311)
T 3ork_A          166 IADSGNSVTQTAAVIGTAQYLSPEQA  191 (311)
T ss_dssp             ----------------CCTTCCHHHH
T ss_pred             ccccccccccccccCcCcccCCHHHh
Confidence            211          2479999999986

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.1e-35  Score=259.43  Aligned_cols=165  Identities=22%  Similarity=0.329  Sum_probs=143.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+++     ..++.||+|++.....  ....+.+.+|+.+++.++||||+++++++...+
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   78 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGN   78 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhceeeeEEecCCCEEEEEEEEC-----CCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            468999999999999999999977     4567899999865432  222355788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+||||+++++|.+++.....+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++....  
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  158 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             eEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence            999999999999999998777789999999999999999999999999999999999999999999999999996321  


Q ss_pred             -------cchhheeeccCccc
Q 023430          267 -------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -------~~~~~~~~~ape~~  280 (282)
                             ...|++.|||||.+
T Consensus       159 ~~~~~~~~~~gt~~y~aPE~~  179 (323)
T 3tki_A          159 NRERLLNKMCGTLPYVAPELL  179 (323)
T ss_dssp             TEECCBCSCCSCGGGSCHHHH
T ss_pred             CcccccCCCccCcCccCcHHh
Confidence                   22679999999986

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=4.4e-35  Score=258.40  Aligned_cols=167  Identities=23%  Similarity=0.405  Sum_probs=143.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh--hHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK--NHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      +.|++.+.||+|+||.||+|.++     .+++.||||++........  ...+.+.+|+.+++.++||||+++++++...
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~   98 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINR-----ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD   98 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             cceEEeeEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            46999999999999999999977     4567899999976543221  2346688999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc---EEEEecC
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH---VMAAHSL  260 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~---v~l~Dfg  260 (282)
                      +.+|+|||||++++|.+.+...    ..+++..+..++.||+.||.|||++||+||||||+|||++.++.   +||+|||
T Consensus        99 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg  178 (351)
T 3c0i_A           99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG  178 (351)
T ss_dssp             TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred             CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence            9999999999999998877543    34899999999999999999999999999999999999987655   9999999


Q ss_pred             cccccc-------cchhheeeccCcccc
Q 023430          261 NSHNQL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       261 ~s~~~~-------~~~~~~~~~ape~~~  281 (282)
                      ++....       ...|++.|||||.+.
T Consensus       179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~  206 (351)
T 3c0i_A          179 VAIQLGESGLVAGGRVGTPHFMAPEVVK  206 (351)
T ss_dssp             TCEECCTTSCBCCCCCSCGGGCCHHHHT
T ss_pred             ceeEecCCCeeecCCcCCcCccCHHHHc
Confidence            996422       125799999999873

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.9e-35  Score=255.08  Aligned_cols=167  Identities=25%  Similarity=0.378  Sum_probs=146.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh---hhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK---KNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +.|++.+.||+|+||.||+|.++     .++..||+|++.......   ....+.+.+|+.+|+.++||||+++++++..
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   85 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREK-----STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN   85 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEET-----TTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             cceEeceEEeeCCCeEEEEEEEC-----CCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            46999999999999999999977     456789999997654221   1135668899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC----cEEEEecCcc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG----HVMAAHSLNS  262 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~----~v~l~Dfg~s  262 (282)
                      ....++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++    .+||+|||++
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            999999999999999999998878899999999999999999999999999999999999999887    8999999999


Q ss_pred             cccc------cchhheeeccCcccc
Q 023430          263 HNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~------~~~~~~~~~ape~~~  281 (282)
                      ....      ...|++.|||||.+.
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~  190 (326)
T 2y0a_A          166 HKIDFGNEFKNIFGTPEFVAPEIVN  190 (326)
T ss_dssp             EECCTTSCCCCCCSCTTTCCHHHHT
T ss_pred             eECCCCCccccccCCcCcCCceeec
Confidence            6421      226799999999874

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=4.4e-35  Score=255.31  Aligned_cols=164  Identities=27%  Similarity=0.330  Sum_probs=139.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS-  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-  188 (282)
                      ++|++.+.||+|+||.||+|+++     .+++.||||++....  .....+.+.+|+.+|+.++||||++++++|.... 
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   78 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNK-----VDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEET-----TTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCS
T ss_pred             hcCceeeEecCCCCeEEEEEEEc-----CCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEecc
Confidence            47999999999999999999987     456789999997543  2334567889999999999999999999986543 


Q ss_pred             --------------------------------------------------------EEEEEEeccCCCchHHHHHhcCC-
Q 023430          189 --------------------------------------------------------KLYLILDFINGGHLFFHLYRQGI-  211 (282)
Q Consensus       189 --------------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~-  211 (282)
                                                                              .+++|||||++++|.+++..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    38999999999999999987543 


Q ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------------------chh
Q 023430          212 --FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------------------CFF  270 (282)
Q Consensus       212 --~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------------------~~~  270 (282)
                        ..+..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....                   ..|
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG  238 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence              45667899999999999999999999999999999999999999999999864322                   258


Q ss_pred             heeeccCccc
Q 023430          271 FFLFLGGGVF  280 (282)
Q Consensus       271 ~~~~~ape~~  280 (282)
                      ++.|+|||.+
T Consensus       239 t~~y~aPE~~  248 (332)
T 3qd2_B          239 TKLYMSPEQI  248 (332)
T ss_dssp             CGGGSCHHHH
T ss_pred             CcCccChHHh
Confidence            9999999986

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2e-35  Score=260.65  Aligned_cols=176  Identities=19%  Similarity=0.273  Sum_probs=150.1

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      ..+.+..++|++.+.||+|+||.||+|++.+......++.||||++....  .....+.+.+|+.+++.+ +||||++++
T Consensus        15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            44566778999999999999999999998765555677899999997643  233456688999999999 789999999


Q ss_pred             EEEEeCC-EEEEEEeccCCCchHHHHHhcCC-------------------------------------------------
Q 023430          182 YSFQTRS-KLYLILDFINGGHLFFHLYRQGI-------------------------------------------------  211 (282)
Q Consensus       182 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~-------------------------------------------------  211 (282)
                      +++...+ .+++||||+++|+|.+++.....                                                 
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS  172 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred             eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence            9998755 49999999999999999976432                                                 


Q ss_pred             -----------------CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-------
Q 023430          212 -----------------FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-------  267 (282)
Q Consensus       212 -----------------~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-------  267 (282)
                                       +++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....       
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  252 (359)
T 3vhe_A          173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK  252 (359)
T ss_dssp             -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC
T ss_pred             cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhc
Confidence                             88999999999999999999999999999999999999999999999999963211       


Q ss_pred             --chhheeeccCccc
Q 023430          268 --CFFFFLFLGGGVF  280 (282)
Q Consensus       268 --~~~~~~~~ape~~  280 (282)
                        ..|++.|||||.+
T Consensus       253 ~~~~~t~~y~aPE~~  267 (359)
T 3vhe_A          253 GDARLPLKWMAPETI  267 (359)
T ss_dssp             --CEECGGGCCHHHH
T ss_pred             cccCCCceeEChhhh
Confidence              1457789999976

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=4.6e-35  Score=255.67  Aligned_cols=172  Identities=19%  Similarity=0.202  Sum_probs=146.8

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|+++..+  ..+..||||++....  .....+.+.+|+.+++.++||||+++++++.
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~--~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  120 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPG--QRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVT  120 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTT--SCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCC--CCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            455678999999999999999999987432  345679999997543  2344567889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ..+..|+||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             GGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             eCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence            999999999999999999999754 5699999999999999999999999999999999999999999999999999964


Q ss_pred             cccc----------hhheeeccCcccc
Q 023430          265 QLCC----------FFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~~----------~~~~~~~ape~~~  281 (282)
                      ...+          .+++.|||||.+.
T Consensus       201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~  227 (325)
T 3kul_A          201 LEDDPDAAYTTTGGKIPIRWTAPEAIA  227 (325)
T ss_dssp             CC----CCEECC---CCGGGSCHHHHH
T ss_pred             cccCccceeeccCCCCcccccCHhHhc
Confidence            3211          3356799999863

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=2.9e-35  Score=255.23  Aligned_cols=170  Identities=22%  Similarity=0.314  Sum_probs=142.6

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      ...+..++|++.+.||+|+||.||+|++.       +..||||++..... .....+.+.+|+.+++.++||||++++++
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~  102 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-------GSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGA  102 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEET-------TEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEEC-------CCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34566779999999999999999999854       45699999876543 33445678899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcCCCcEEEEe
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGI---FREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                      +...+..++||||+++|+|.+++...+.   +++..+..++.|++.||.|||++|  |+||||||+|||++.++.+||+|
T Consensus       103 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~D  182 (309)
T 3p86_A          103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD  182 (309)
T ss_dssp             ECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECC
T ss_pred             EEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECC
Confidence            9999999999999999999999976543   899999999999999999999999  99999999999999999999999


Q ss_pred             cCcccccc-------cchhheeeccCcccc
Q 023430          259 SLNSHNQL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       259 fg~s~~~~-------~~~~~~~~~ape~~~  281 (282)
                      ||++....       ...|++.|+|||.+.
T Consensus       183 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~  212 (309)
T 3p86_A          183 FGLSRLKASTFLSSKSAAGTPEWMAPEVLR  212 (309)
T ss_dssp             CC-----------------CCTTSCHHHHT
T ss_pred             CCCCccccccccccccCCCCccccChhhhc
Confidence            99996322       236799999999863

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=3.6e-35  Score=260.13  Aligned_cols=171  Identities=13%  Similarity=0.262  Sum_probs=142.4

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC---CCCeeeee
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT---HPFIVQLR  181 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~  181 (282)
                      ..+..++|.+.++||+|+||.||+|.++...+...++.||+|++....      .+.+.+|+.+++.++   |+||++++
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~  133 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFY  133 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence            345567899999999999999999975443344577889999986542      234677888888887   99999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC------
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYR-----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS------  250 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~------  250 (282)
                      +++...+..|+|||||++|+|.+++..     ...+++..+..++.||+.||.|||++|||||||||+|||++.      
T Consensus       134 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~  213 (365)
T 3e7e_A          134 SAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD  213 (365)
T ss_dssp             EEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-
T ss_pred             eeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc
Confidence            999999999999999999999999974     456999999999999999999999999999999999999998      


Q ss_pred             -----CCcEEEEecCccccc---------ccchhheeeccCcccc
Q 023430          251 -----DGHVMAAHSLNSHNQ---------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       251 -----~~~v~l~Dfg~s~~~---------~~~~~~~~~~ape~~~  281 (282)
                           ++.+||+|||+|...         ....||+.|||||++.
T Consensus       214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  258 (365)
T 3e7e_A          214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS  258 (365)
T ss_dssp             -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHT
T ss_pred             ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhc
Confidence                 899999999999521         1225799999999863

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.8e-35  Score=261.25  Aligned_cols=173  Identities=18%  Similarity=0.255  Sum_probs=144.6

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|++.+......+..||||++....  .......+.+|+.+++.++||||+++++++.
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~  144 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSL  144 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            34557899999999999999999998765455577889999986532  2333456788999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC---cEE
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQG-------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG---HVM  255 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~---~v~  255 (282)
                      .....|+||||+++|+|.+++....       .+++..++.++.||+.||.|||++||+||||||+|||++.+|   .+|
T Consensus       145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k  224 (367)
T 3l9p_A          145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK  224 (367)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence            9999999999999999999997643       488999999999999999999999999999999999999655   499


Q ss_pred             EEecCcccc---------cccchhheeeccCccc
Q 023430          256 AAHSLNSHN---------QLCCFFFFLFLGGGVF  280 (282)
Q Consensus       256 l~Dfg~s~~---------~~~~~~~~~~~ape~~  280 (282)
                      |+|||+++.         ..+..+++.|||||.+
T Consensus       225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~  258 (367)
T 3l9p_A          225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF  258 (367)
T ss_dssp             ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHH
T ss_pred             ECCCccccccccccccccCCCcCCcccEECHHHh
Confidence            999999952         2223568899999976

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-35  Score=256.27  Aligned_cols=174  Identities=20%  Similarity=0.247  Sum_probs=150.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.+.||+|+||.||+|++.+......+..||+|++....  .....+.+.+|+.+++.++||||+++++++
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            455667899999999999999999998765444566889999997643  234456788999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeec
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ------------------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRD  240 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~------------------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrD  240 (282)
                      ...+..|+||||+++++|.+++...                        ..+++.+++.++.||+.||.|||++||+|||
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999999999999999763                        4689999999999999999999999999999


Q ss_pred             cCCCceEEcCCCcEEEEecCccccc---------ccchhheeeccCccc
Q 023430          241 LKPENILMDSDGHVMAAHSLNSHNQ---------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       241 lKp~NILl~~~~~v~l~Dfg~s~~~---------~~~~~~~~~~ape~~  280 (282)
                      |||+|||++.++.+||+|||++...         ....+++.|+|||.+
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  248 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI  248 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh
Confidence            9999999999999999999998532         122457889999976

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.3e-34  Score=244.89  Aligned_cols=171  Identities=27%  Similarity=0.385  Sum_probs=146.9

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|+++     ..++.||+|++...........+.+.+|+.+++.++||||+++++++.
T Consensus         7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   81 (276)
T 2h6d_A            7 RVKIGHYVLGDTLGVGTFGKVKIGEHQ-----LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS   81 (276)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cceeccEEEEeeecCCCCeEEEEEEEC-----CCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe
Confidence            345678999999999999999999976     356789999998765444555677889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      ..+..++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           82 TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence            99999999999999999999988888999999999999999999999999999999999999999999999999998643


Q ss_pred             c------cchhheeeccCcccc
Q 023430          266 L------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~------~~~~~~~~~ape~~~  281 (282)
                      .      ...+++.|+|||.+.
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~  183 (276)
T 2h6d_A          162 SDGEFLRTSCGSPNYAAPEVIS  183 (276)
T ss_dssp             CC-------------CCTGGGT
T ss_pred             CCCcceecccCCccccCHHHHc
Confidence            2      236799999999873

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.6e-35  Score=251.22  Aligned_cols=168  Identities=27%  Similarity=0.469  Sum_probs=139.3

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-----------------------hhHHHHHHH
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-----------------------KNHVDYMKA  164 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~  164 (282)
                      ..++|++.+.||+|+||.||+|+++     ..+..||||++.......                       ....+.+.+
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNE-----NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQ   85 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEET-----TTTEEEEEEEEECC-------------------------------CHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEEC-----CCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHH
Confidence            3578999999999999999999876     457789999997653211                       112355788


Q ss_pred             HHHHHHhcCCCCeeeeeEEEEe--CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccC
Q 023430          165 ERDILTKVTHPFIVQLRYSFQT--RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLK  242 (282)
Q Consensus       165 E~~~l~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlK  242 (282)
                      |+.+++.++||||+++++++..  ...+|+||||+++++|.+++ ..+.+++..+..++.|++.||.|||++||+|||||
T Consensus        86 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  164 (298)
T 2zv2_A           86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIK  164 (298)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             HHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            9999999999999999999986  56899999999999997754 34568999999999999999999999999999999


Q ss_pred             CCceEEcCCCcEEEEecCcccccc-------cchhheeeccCcccc
Q 023430          243 PENILMDSDGHVMAAHSLNSHNQL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       243 p~NILl~~~~~v~l~Dfg~s~~~~-------~~~~~~~~~ape~~~  281 (282)
                      |+|||++.++.+||+|||++....       ...|++.|||||.+.
T Consensus       165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (298)
T 2zv2_A          165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLS  210 (298)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCC
T ss_pred             HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhc
Confidence            999999999999999999986321       226799999999873

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.2e-34  Score=247.77  Aligned_cols=171  Identities=29%  Similarity=0.485  Sum_probs=151.5

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|++.     ..+..||+|++...........+.+.+|+.+++.++||||+++++++.
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   84 (284)
T 2vgo_A           10 KFTIDDFDIGRPLGKGKFGNVYLAREK-----QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH   84 (284)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             chhhhhceeeheecCCCCeEEEEEEEc-----CCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE
Confidence            445678999999999999999999976     456789999997765444444567889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      ..+..|+||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        85 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            99999999999999999999988888999999999999999999999999999999999999999999999999988532


Q ss_pred             -----ccchhheeeccCcccc
Q 023430          266 -----LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 -----~~~~~~~~~~ape~~~  281 (282)
                           ....|++.|+|||.+.
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~  185 (284)
T 2vgo_A          165 PSLRRRTMCGTLDYLPPEMIE  185 (284)
T ss_dssp             SSSCBCCCCSCGGGCCHHHHT
T ss_pred             cccccccccCCCCcCCHHHhc
Confidence                 2236799999999863

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3.6e-35  Score=267.70  Aligned_cols=149  Identities=22%  Similarity=0.346  Sum_probs=123.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++++.||+|+||.||+|+++     .+++.||||++.... ......+.+.+|+.+|+.++||||+++++++... 
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  125 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDK-----LEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD  125 (458)
T ss_dssp             CTTEEECCC-------CEEEEEEC-----C--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEEC-----CCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC
Confidence            478999999999999999999977     457789999986543 2334456788999999999999999999998543 


Q ss_pred             ----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          188 ----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                          ..+|+||||+. ++|..++.....+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||+|+
T Consensus       126 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          126 VEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             TTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             cccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccch
Confidence                57999999985 6899999888889999999999999999999999999999999999999999999999999996


Q ss_pred             c
Q 023430          264 N  264 (282)
Q Consensus       264 ~  264 (282)
                      .
T Consensus       205 ~  205 (458)
T 3rp9_A          205 T  205 (458)
T ss_dssp             C
T ss_pred             h
Confidence            4

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.6e-34  Score=253.21  Aligned_cols=167  Identities=22%  Similarity=0.350  Sum_probs=150.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.+.||+|+||.||++++.     ..++.||+|++...........+.+.+|+.+++.++|+||+++++++...+
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  114 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDA-----DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND  114 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            357999999999999999999976     456789999998765545556677889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+||||+.+++|.+++...+.+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....  
T Consensus       115 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  194 (335)
T 2owb_A          115 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  194 (335)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             eEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence            999999999999999999888889999999999999999999999999999999999999999999999999986422  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...|++.|+|||.+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~  213 (335)
T 2owb_A          195 GERKKVLCGTPNYIAPEVL  213 (335)
T ss_dssp             TCCBCCCCSCCSSCCHHHH
T ss_pred             cccccccCCCccccCHHHh
Confidence                 22579999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.3e-34  Score=247.33  Aligned_cols=168  Identities=22%  Similarity=0.350  Sum_probs=150.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.+.||+|+||.||++.++     ..++.||+|++...........+.+.+|+.+++.++|+||+++++++...+
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   88 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDA-----DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND   88 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEEEEeecCCEEEEEEEEC-----CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence            468999999999999999999976     456789999998765545556677889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....  
T Consensus        89 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  168 (294)
T 2rku_A           89 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  168 (294)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence            999999999999999999888889999999999999999999999999999999999999999999999999986422  


Q ss_pred             -----cchhheeeccCcccc
Q 023430          267 -----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -----~~~~~~~~~ape~~~  281 (282)
                           ...|++.|+|||.+.
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~  188 (294)
T 2rku_A          169 GERKKVLCGTPNYIAPEVLS  188 (294)
T ss_dssp             TCCBCCCCSCCSSCCHHHHT
T ss_pred             ccccccccCCCCcCCcchhc
Confidence                 225799999999863

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=8.4e-35  Score=251.92  Aligned_cols=175  Identities=18%  Similarity=0.251  Sum_probs=150.1

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+.+..++|++.+.||+|+||.||+|.+........+..||+|++....  .....+.+.+|+.+++.++||||++++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   94 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGA   94 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEE
Confidence            4456667899999999999999999998654434456789999997543  33445678899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHHHHHCCCEee
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGI------------------------FREDQARFYTAEIVSAVSHLHKCGIVHR  239 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------------------~~~~~~~~i~~qi~~gL~ylH~~~iiHr  239 (282)
                      +...+..++||||+++++|.+++.....                        +++.++..++.|++.||.|||++||+||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~  174 (314)
T 2ivs_A           95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR  174 (314)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             EecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence            9999999999999999999999986543                        7899999999999999999999999999


Q ss_pred             ccCCCceEEcCCCcEEEEecCcccccc---------cchhheeeccCccc
Q 023430          240 DLKPENILMDSDGHVMAAHSLNSHNQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       240 DlKp~NILl~~~~~v~l~Dfg~s~~~~---------~~~~~~~~~ape~~  280 (282)
                      ||||+|||++.++.++|+|||++....         ...+++.|+|||.+
T Consensus       175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  224 (314)
T 2ivs_A          175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL  224 (314)
T ss_dssp             CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH
T ss_pred             ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhh
Confidence            999999999999999999999986321         12446789999976

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=257.68  Aligned_cols=174  Identities=17%  Similarity=0.264  Sum_probs=148.8

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCC--CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      +.+..++|++.+.||+|+||.||+|++.++..  ...+..||+|++....  .....+.+.+|+++++.+ +||||++++
T Consensus        64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~  141 (382)
T 3tt0_A           64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLL  141 (382)
T ss_dssp             TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence            34556789999999999999999999875432  1344679999997653  334456788999999999 899999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      +++...+..|+||||+++|+|.+++....                .+++..++.++.|++.||.|||++||+||||||+|
T Consensus       142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  221 (382)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence            99999999999999999999999998753                48999999999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCcccccc---------cchhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~---------~~~~~~~~~ape~~  280 (282)
                      ||++.++.+||+|||++....         ...+++.|+|||.+
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~  265 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL  265 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH
T ss_pred             EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHh
Confidence            999999999999999996321         12457889999976

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.5e-34  Score=244.14  Aligned_cols=168  Identities=23%  Similarity=0.371  Sum_probs=137.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|++.     ..+..||+|++...........+.+.+|+.+++.++||||+++++++...+
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   84 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESI-----HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN   84 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS
T ss_pred             cccceeeeeecCCCceEEEEEEEc-----cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC
Confidence            357999999999999999999976     356789999998765444455677889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ..++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.... 
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            999999999999999998765 568999999999999999999999999999999999999999999999999986422 


Q ss_pred             ------cchhheeeccCcccc
Q 023430          267 ------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ------~~~~~~~~~ape~~~  281 (282)
                            ...|++.|+|||.+.
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~  185 (278)
T 3cok_A          165 PHEKHYTLCGTPNYISPEIAT  185 (278)
T ss_dssp             ---------------------
T ss_pred             CCCcceeccCCCCcCCcchhc
Confidence                  236799999999863

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.3e-34  Score=247.61  Aligned_cols=168  Identities=25%  Similarity=0.353  Sum_probs=147.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|++.     ..++.||+|++...........+.+.+|+.+++.++||||+++++++...+
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDT-----VRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEc-----CCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence            578999999999999999999976     456789999998765545555677889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....  
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            999999999999999999888889999999999999999999999999999999999999999999999999985322  


Q ss_pred             ------cchhheeeccCcccc
Q 023430          267 ------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ------~~~~~~~~~ape~~~  281 (282)
                            ...|++.|+|||.+.
T Consensus       188 ~~~~~~~~~~~~~y~aPE~~~  208 (309)
T 2h34_A          188 KLTQLGNTVGTLYYMAPERFS  208 (309)
T ss_dssp             ---------CCGGGCCGGGTC
T ss_pred             ccccccccCCCcCccCHHHHc
Confidence                  125789999999873

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.1e-34  Score=251.68  Aligned_cols=165  Identities=25%  Similarity=0.384  Sum_probs=140.2

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++++.||+|+||.||+|++.      .++.||+|++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   91 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDS------QGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSE   91 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEET------TSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEEC------CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence            3578999999999999999999874      367899999976532 333456688899999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc-
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ-  265 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~-  265 (282)
                      ..+++||||+++ +|.+.+... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++... 
T Consensus        92 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A           92 RCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             SCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             CEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            999999999985 777777654 45899999999999999999999999999999999999999999999999999632 


Q ss_pred             ------ccchhheeeccCccc
Q 023430          266 ------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ------~~~~~~~~~~ape~~  280 (282)
                            ....+++.|||||.+
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~  191 (311)
T 3niz_A          171 IPVRSYTHEVVTLWYRAPDVL  191 (311)
T ss_dssp             SCCC---CCCCCCTTCCHHHH
T ss_pred             CCcccccCCcccCCcCCHHHh
Confidence                  122669999999986

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.1e-36  Score=266.85  Aligned_cols=165  Identities=17%  Similarity=0.234  Sum_probs=135.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh-----hhhHHHHHHHHHHHHHhcC---------C
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII-----KKNHVDYMKAERDILTKVT---------H  174 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~---------h  174 (282)
                      .++|++.+.||+|+||.||+|++.       ++.||||++......     .....+.+.+|+.+|+.++         |
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h   91 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIAD-------HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRT   91 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEET-------TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBC
T ss_pred             cccchheeeecccCceEEEEEEeC-------CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccC
Confidence            357888999999999999999863       478999999865321     2233466888999998886         7


Q ss_pred             CCeeeeeEEEE-----------------e-------------CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHH
Q 023430          175 PFIVQLRYSFQ-----------------T-------------RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI  224 (282)
Q Consensus       175 ~nIv~l~~~~~-----------------~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi  224 (282)
                      +||+++.+.+.                 .             ...+|||||||++|++.+.+.+ +.+++..++.++.||
T Consensus        92 ~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           92 EGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQL  170 (336)
T ss_dssp             CCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHH
T ss_pred             CchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHH
Confidence            77777666543                 2             6789999999999977666633 568999999999999


Q ss_pred             HHHHHHHH-HCCCEeeccCCCceEEcCCC--------------------cEEEEecCcccccc--cchhheeeccCcccc
Q 023430          225 VSAVSHLH-KCGIVHRDLKPENILMDSDG--------------------HVMAAHSLNSHNQL--CCFFFFLFLGGGVFN  281 (282)
Q Consensus       225 ~~gL~ylH-~~~iiHrDlKp~NILl~~~~--------------------~v~l~Dfg~s~~~~--~~~~~~~~~ape~~~  281 (282)
                      +.||.||| ++|||||||||+|||++.++                    .+||+|||+|+...  ...||+.|||||.|.
T Consensus       171 ~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~  250 (336)
T 2vuw_A          171 TASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFT  250 (336)
T ss_dssp             HHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGC
T ss_pred             HHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhc
Confidence            99999999 99999999999999999987                    89999999997533  337899999999983

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.4e-34  Score=248.54  Aligned_cols=165  Identities=24%  Similarity=0.300  Sum_probs=136.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHH-hcCCCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT-KVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~~~  188 (282)
                      ++|++.++||+|+||+||+|+++     ..++.||||++...........+ ...|+..+. ..+|+||+++++++...+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~-~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSK-----EDGRLYAVKRSMSPFRGPKDRAR-KLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-----TTSCEEEEEEESSSCCSHHHHHH-HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hheeeeheeccCCCeEEEEEEEC-----CCCeEEEEEEecccccChHHHHH-HHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            46999999999999999999977     45778999998654333333333 334554444 458999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      .+|+||||+ +++|.+++... ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||++.... 
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          131 ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             EEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             EEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            999999999 66888887664 459999999999999999999999999999999999999999999999999985322 


Q ss_pred             -----cchhheeeccCcccc
Q 023430          267 -----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -----~~~~~~~~~ape~~~  281 (282)
                           ...|++.|||||++.
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~  229 (311)
T 3p1a_A          210 AGAGEVQEGDPRYMAPELLQ  229 (311)
T ss_dssp             -----CCCCCGGGCCGGGGG
T ss_pred             CCCCcccCCCccccCHhHhc
Confidence                 225799999999873

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=2.7e-34  Score=253.13  Aligned_cols=164  Identities=21%  Similarity=0.281  Sum_probs=143.9

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|++++.||+|+||.||+|++.     ..+..||||++...........+.+.+|+.+++.++||||+++++++...+..
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  129 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA  129 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             heeeeeEEccCCCEEEEEEEEc-----cCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeE
Confidence            5999999999999999999976     45778999999765444445556788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          191 YLILDFINGGHLFFHLY-RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      |+||||+. |+|.+++. ....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....   
T Consensus       130 ~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~  208 (348)
T 1u5q_A          130 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN  208 (348)
T ss_dssp             EEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred             EEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence            99999998 57777765 35679999999999999999999999999999999999999999999999999996432   


Q ss_pred             cchhheeeccCccc
Q 023430          267 CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~~~~~~~~~ape~~  280 (282)
                      ...|++.|||||.+
T Consensus       209 ~~~gt~~y~aPE~~  222 (348)
T 1u5q_A          209 SFVGTPYWMAPEVI  222 (348)
T ss_dssp             CCCSCGGGCCHHHH
T ss_pred             cccCCcceeCHhhh
Confidence            23679999999986

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-34  Score=253.79  Aligned_cols=175  Identities=19%  Similarity=0.294  Sum_probs=147.0

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRY  182 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~  182 (282)
                      .+.+..++|++.+.||+|+||.||+|++........+..||+|++....  .....+.+.+|+.+++.+ +||||+++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  116 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLG  116 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            4566778999999999999999999998654444566789999997543  223346688999999999 8999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEee
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQG-----------------------IFREDQARFYTAEIVSAVSHLHKCGIVHR  239 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHr  239 (282)
                      ++...+..|+||||+++|+|.+++....                       .+++..+..++.||+.||.|||++||+||
T Consensus       117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~  196 (344)
T 1rjb_A          117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR  196 (344)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            9999999999999999999999997643                       27899999999999999999999999999


Q ss_pred             ccCCCceEEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          240 DLKPENILMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       240 DlKp~NILl~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      ||||+|||++.++.++|+|||++.....+         .+++.|+|||.+
T Consensus       197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  246 (344)
T 1rjb_A          197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL  246 (344)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH
T ss_pred             CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh
Confidence            99999999999999999999999633211         346689999976

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.9e-34  Score=261.17  Aligned_cols=165  Identities=19%  Similarity=0.321  Sum_probs=144.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++.+.||+|+||.||+|+++     .+++.||||++.... ......+.+.+|+.+|+.++|+||+++++++... 
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~   98 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDK-----NTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD   98 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEET-----TTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEEC-----CCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC
Confidence            568999999999999999999977     457789999997543 2334456788999999999999999999999766 


Q ss_pred             ----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          188 ----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                          ..+|+||||+. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus        99 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A           99 LLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             TTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence                57999999987 5999999887789999999999999999999999999999999999999999999999999996


Q ss_pred             ccc-----------------------------cchhheeeccCccc
Q 023430          264 NQL-----------------------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~-----------------------------~~~~~~~~~ape~~  280 (282)
                      ...                             ...||+.|+|||.+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~  223 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI  223 (432)
T ss_dssp             EC-------------------------------CCCCCTTCCHHHH
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccCHHHH
Confidence            421                             22569999999975

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-34  Score=257.01  Aligned_cols=164  Identities=24%  Similarity=0.405  Sum_probs=143.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|.++     .++..||+|++.....   .....+.+|+.+|+.++||||+++++++.....
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  122 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEK-----ATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE  122 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEecCCCEEEEEEEEC-----CCCCEEEEEEecccch---hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCE
Confidence            57999999999999999999977     4567899999876432   223468899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC--CCcEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS--DGHVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~--~~~v~l~Dfg~s~~~~  266 (282)
                      +++||||+.+|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++....
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence            999999999999999887543 6899999999999999999999999999999999999974  4779999999996422


Q ss_pred             ------cchhheeeccCcccc
Q 023430          267 ------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ------~~~~~~~~~ape~~~  281 (282)
                            ...||+.|||||++.
T Consensus       203 ~~~~~~~~~gt~~y~aPE~~~  223 (387)
T 1kob_A          203 PDEIVKVTTATAEFAAPEIVD  223 (387)
T ss_dssp             TTSCEEEECSSGGGCCHHHHT
T ss_pred             CCcceeeeccCCCccCchhcc
Confidence                  226799999999874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-34  Score=249.96  Aligned_cols=166  Identities=24%  Similarity=0.342  Sum_probs=143.3

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.++||+|+||.||+|+++     .+++.||||++.....  ....+.+.+|+.+++.++||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   79 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHK-----KTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET   79 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEEC-----CCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCcceEEEEeecC
Confidence            3468999999999999999999987     3567899999976542  23345677899999999999999999998875


Q ss_pred             C--EEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE----cCCCcEEEEe
Q 023430          188 S--KLYLILDFINGGHLFFHLYRQGI---FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM----DSDGHVMAAH  258 (282)
Q Consensus       188 ~--~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl----~~~~~v~l~D  258 (282)
                      .  ..++||||+++++|.+++.....   +++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~D  159 (319)
T 4euu_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTD  159 (319)
T ss_dssp             TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred             CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEcc
Confidence            5  78999999999999999976433   8999999999999999999999999999999999999    7888899999


Q ss_pred             cCcccccc------cchhheeeccCccc
Q 023430          259 SLNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~------~~~~~~~~~ape~~  280 (282)
                      ||++....      ...|++.|+|||.+
T Consensus       160 fg~a~~~~~~~~~~~~~gt~~y~aPE~~  187 (319)
T 4euu_A          160 FGAARELEDDEQFVSLYGTEEYLHPDMY  187 (319)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred             CCCceecCCCCceeecccCCCccCHHHh
Confidence            99996422      22579999999976

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.9e-34  Score=246.94  Aligned_cols=172  Identities=18%  Similarity=0.180  Sum_probs=147.0

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCC--CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+..++|++.+.||+|+||.||+|+++.+++  ......||+|++....   ....+.+.+|+.+++.++||||++++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~   80 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGV   80 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            3456789999999999999999998774321  0112569999986543   3445668899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc--------E
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH--------V  254 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~--------v  254 (282)
                      +...+..++||||+++++|.+++..... +++..+..++.|++.||.|||++||+||||||+|||++.++.        +
T Consensus        81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           81 CVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             ECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             EEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence            9999999999999999999999987654 899999999999999999999999999999999999998887        9


Q ss_pred             EEEecCcccccccc---hhheeeccCccc
Q 023430          255 MAAHSLNSHNQLCC---FFFFLFLGGGVF  280 (282)
Q Consensus       255 ~l~Dfg~s~~~~~~---~~~~~~~ape~~  280 (282)
                      +|+|||++......   .+++.|+|||.+
T Consensus       161 kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~  189 (289)
T 4fvq_A          161 KLSDPGISITVLPKDILQERIPWVPPECI  189 (289)
T ss_dssp             EECCCCSCTTTSCHHHHHHTTTTSCHHHH
T ss_pred             eeccCcccccccCccccCCcCcccCHHHh
Confidence            99999999654332   568999999976

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.3e-34  Score=264.38  Aligned_cols=168  Identities=29%  Similarity=0.435  Sum_probs=143.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh----------hhHHHHHHHHHHHHHhcCCCCee
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK----------KNHVDYMKAERDILTKVTHPFIV  178 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~h~nIv  178 (282)
                      .++|+++++||+|+||.||+|+++     ..+..||+|++.+.....          ....+.+.+|+.+|+.++||||+
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv  109 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEK-----NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNII  109 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEET-----TTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBC
T ss_pred             ccceEEEeEecccCCeEEEEEEEC-----CCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCC
Confidence            357999999999999999999987     456789999997654321          13356688999999999999999


Q ss_pred             eeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC---cEE
Q 023430          179 QLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG---HVM  255 (282)
Q Consensus       179 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~---~v~  255 (282)
                      ++++++.....+|+|||||++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++   .+|
T Consensus       110 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~k  189 (504)
T 3q5i_A          110 KLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK  189 (504)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred             eEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEE
Confidence            99999999999999999999999999998888899999999999999999999999999999999999999876   699


Q ss_pred             EEecCccccc------ccchhheeeccCcccc
Q 023430          256 AAHSLNSHNQ------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       256 l~Dfg~s~~~------~~~~~~~~~~ape~~~  281 (282)
                      |+|||++...      ....|++.|+|||++.
T Consensus       190 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  221 (504)
T 3q5i_A          190 IVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK  221 (504)
T ss_dssp             ECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT
T ss_pred             EEECCCCEEcCCCCccccccCCcCCCCHHHhc
Confidence            9999999632      2236899999999863

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=5.9e-34  Score=261.62  Aligned_cols=166  Identities=28%  Similarity=0.446  Sum_probs=146.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.++||+|+||.||+|+++     .++..||||++.+.... ....+.+.+|+.+|+.++||||+++++++.....
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   95 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDR-----ITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSS   95 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEET-----TTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cceEEeEEEeecCCEEEEEEEEC-----CCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE
Confidence            46999999999999999999977     45678999999765432 2335668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc---CCCcEEEEecCccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD---SDGHVMAAHSLNSHNQ-  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~---~~~~v~l~Dfg~s~~~-  265 (282)
                      +|+|||||.+++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++... 
T Consensus        96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            999999999999999998888899999999999999999999999999999999999995   4567999999999632 


Q ss_pred             -----ccchhheeeccCcccc
Q 023430          266 -----LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 -----~~~~~~~~~~ape~~~  281 (282)
                           ....|++.|||||++.
T Consensus       176 ~~~~~~~~~gt~~y~aPE~~~  196 (486)
T 3mwu_A          176 QNTKMKDRIGTAYYIAPEVLR  196 (486)
T ss_dssp             CC----CCTTGGGGCCGGGGG
T ss_pred             CCCccCCCcCCCCCCCHHHhC
Confidence                 1226899999999873

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.8e-34  Score=247.09  Aligned_cols=166  Identities=22%  Similarity=0.272  Sum_probs=143.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||.||+|++.     .++..||+|++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   75 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNR-----DTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR   75 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cccceEeeEEeecCCeEEEEEEeC-----CCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCC
Confidence            368999999999999999999976     456789999886543 23334566788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..++||||+++++|..++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....  
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  155 (311)
T 4agu_A           76 RLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP  155 (311)
T ss_dssp             EEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             eEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence            999999999999999888877889999999999999999999999999999999999999999999999999996322  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...|++.|+|||.+
T Consensus       156 ~~~~~~~~~~~~y~aPE~~  174 (311)
T 4agu_A          156 SDYYDDEVATRWYRSPELL  174 (311)
T ss_dssp             ----------GGGCCHHHH
T ss_pred             ccccCCCcCCccccChHHH
Confidence                 22679999999976

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=6.7e-35  Score=259.65  Aligned_cols=171  Identities=19%  Similarity=0.298  Sum_probs=146.8

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+.+..++|++.+.||+|+||.||+|+++     ..+..||||+++...  .....+.+.+|+.+|+.++||||++++++
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~  180 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLR-----ADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGV  180 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEe-----cCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            34556678999999999999999999987     356789999987542  23334557889999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +...+..|+||||+++|+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       181 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s  260 (377)
T 3cbl_A          181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS  260 (377)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred             EecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCc
Confidence            999899999999999999999987653 5899999999999999999999999999999999999999999999999999


Q ss_pred             cccccc---------hhheeeccCcccc
Q 023430          263 HNQLCC---------FFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~~~---------~~~~~~~ape~~~  281 (282)
                      +.....         .++..|||||.++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  288 (377)
T 3cbl_A          261 REEADGVYAASGGLRQVPVKWTAPEALN  288 (377)
T ss_dssp             EECTTSEEECCSSCCEEEGGGSCHHHHH
T ss_pred             eecCCCceeecCCCCCCCcCcCCHhHhc
Confidence            743221         2356799999863

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.7e-35  Score=256.16  Aligned_cols=166  Identities=23%  Similarity=0.340  Sum_probs=145.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh-----hHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK-----NHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ++|++.+.||+|+||.||+|+++     ..+..||||++........     ...+.+.+|+.+++.++||||+++++++
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~   98 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDK-----EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF   98 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEET-----TTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cceEEEeEEEecCCEEEEEEEEC-----CCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            47999999999999999999976     4577899999986542221     1233466799999999999999999999


Q ss_pred             EeCCEEEEEEeccCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ...+.+++||||+.+| +|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~  178 (335)
T 3dls_A           99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA  178 (335)
T ss_dssp             ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence            9999999999999776 999999888889999999999999999999999999999999999999999999999999996


Q ss_pred             ccc------cchhheeeccCccc
Q 023430          264 NQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~------~~~~~~~~~ape~~  280 (282)
                      ...      ...|++.|||||.+
T Consensus       179 ~~~~~~~~~~~~gt~~y~aPE~~  201 (335)
T 3dls_A          179 YLERGKLFYTFCGTIEYCAPEVL  201 (335)
T ss_dssp             ECCTTCCBCEECSCGGGCCHHHH
T ss_pred             ECCCCCceeccCCCccccChhhh
Confidence            322      22579999999986

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.8e-35  Score=256.90  Aligned_cols=174  Identities=43%  Similarity=0.729  Sum_probs=147.8

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh-hhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII-KKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      .+..++|++.+.||+|+||.||+|++...  ...++.||||++++.... .....+.+.+|+.+|+.+ +|+||++++++
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  127 (355)
T 1vzo_A           50 KVGIENFELLKVLGTGAYGKVFLVRKISG--HDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYA  127 (355)
T ss_dssp             CCCGGGEEEEEEEEETTTEEEEEEEECSS--TTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEE
T ss_pred             cccccceEEEEEeccCCCEEEEEEEEccc--CCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEE
Confidence            34557899999999999999999987531  236788999998754321 112223466799999999 69999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +.....+++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          128 FQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             EEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             EeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            99999999999999999999999888889999999999999999999999999999999999999999999999999986


Q ss_pred             cccc--------chhheeeccCcccc
Q 023430          264 NQLC--------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~--------~~~~~~~~ape~~~  281 (282)
                      ....        ..|++.|||||.+.
T Consensus       208 ~~~~~~~~~~~~~~gt~~y~aPE~~~  233 (355)
T 1vzo_A          208 EFVADETERAYDFCGTIEYMAPDIVR  233 (355)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHHHHT
T ss_pred             ecccCCCCcccCcccCcCccChhhhc
Confidence            3211        25799999999873

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.6e-34  Score=243.90  Aligned_cols=167  Identities=22%  Similarity=0.322  Sum_probs=144.7

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+.+..++|++.+.||+|+||.||+|++.      .+..||+|++.....    ..+.+.+|+.+++.++||||++++++
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~   73 (269)
T 4hcu_A            4 KWVIDPSELTFVQEIGSGQFGLVHLGYWL------NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGV   73 (269)
T ss_dssp             -CBCCGGGEEEEEEEEECSSCEEEEEEET------TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             cEEeChhhceeeheecCCCccEEEEEEec------CCCeEEEEEeccccc----CHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            35566789999999999999999999875      345699999976532    22458889999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +...+..++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus        74 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  153 (269)
T 4hcu_A           74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT  153 (269)
T ss_dssp             ECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred             EecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccc
Confidence            99999999999999999999999654 45899999999999999999999999999999999999999999999999999


Q ss_pred             cccccc--------hhheeeccCccc
Q 023430          263 HNQLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~--------~~~~~~~ape~~  280 (282)
                      ......        .+++.|+|||.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (269)
T 4hcu_A          154 RFVLDDQYTSSTGTKFPVKWASPEVF  179 (269)
T ss_dssp             GGBCCHHHHSTTSTTCCGGGCCHHHH
T ss_pred             ccccccccccccCcccccccCCHHHh
Confidence            643222        346679999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=2.3e-34  Score=253.72  Aligned_cols=163  Identities=31%  Similarity=0.476  Sum_probs=133.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .+.|++.+.||+|+||.||+|+++     ..++.||||++....     ..+.+.+|+.+++.++||||+++++++....
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  121 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQK-----GTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT  121 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEEC-----CCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCC
Confidence            357999999999999999999987     356789999987543     2345778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---CCcEEEEecCccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---DGHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---~~~v~l~Dfg~s~~~  265 (282)
                      ..++||||+++++|.+++...+.+++.++..++.|++.||.|||++||+||||||+|||++.   ++.+||+|||++...
T Consensus       122 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          122 EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV  201 (349)
T ss_dssp             EEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred             eEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence            99999999999999999988888999999999999999999999999999999999999975   899999999998642


Q ss_pred             c------cchhheeeccCcccc
Q 023430          266 L------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~------~~~~~~~~~ape~~~  281 (282)
                      .      ...|++.|+|||.+.
T Consensus       202 ~~~~~~~~~~gt~~y~aPE~~~  223 (349)
T 2w4o_A          202 EHQVLMKTVCGTPGYCAPEILR  223 (349)
T ss_dssp             -----------CGGGSCHHHHT
T ss_pred             CcccccccccCCCCccCHHHhc
Confidence            2      225799999999863

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.2e-34  Score=264.23  Aligned_cols=166  Identities=28%  Similarity=0.421  Sum_probs=148.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.++||+|+||.||+|+++     .++..||||++.+.........+.+.+|+.+++.++||||+++++++...+.
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  100 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDK-----ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY  100 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CceEEeeEEecCCCEEEEEEEEC-----CCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            47999999999999999999977     4567899999977654444556778899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE---cCCCcEEEEecCccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM---DSDGHVMAAHSLNSHNQ-  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl---~~~~~v~l~Dfg~s~~~-  265 (282)
                      .|+||||+.+|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++... 
T Consensus       101 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          101 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            99999999999999999888889999999999999999999999999999999999999   56789999999988532 


Q ss_pred             -----ccchhheeeccCccc
Q 023430          266 -----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 -----~~~~~~~~~~ape~~  280 (282)
                           ....|++.|||||++
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~  200 (484)
T 3nyv_A          181 ASKKMKDKIGTAYYIAPEVL  200 (484)
T ss_dssp             CCCSHHHHTTGGGTCCHHHH
T ss_pred             cccccccCCCCccccCceee
Confidence                 122689999999986

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=8.7e-34  Score=242.24  Aligned_cols=166  Identities=28%  Similarity=0.414  Sum_probs=147.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.++     ..+..||+|++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   78 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHK-----TTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEES   78 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEc-----CCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC
Confidence            478999999999999999999977     4567899999976543 3344567889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc---EEEEecCccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH---VMAAHSLNSHNQ  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~---v~l~Dfg~s~~~  265 (282)
                      ..++||||+++++|.+.+.....+++..+..++.|++.||.|||++||+||||||+|||++.++.   ++|+|||++...
T Consensus        79 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           79 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  158 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence            99999999999999999988888999999999999999999999999999999999999987665   999999998532


Q ss_pred             c------cchhheeeccCccc
Q 023430          266 L------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~------~~~~~~~~~ape~~  280 (282)
                      .      ...|++.|+|||.+
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~  179 (284)
T 3kk8_A          159 NDSEAWHGFAGTPGYLSPEVL  179 (284)
T ss_dssp             CSSCBCCCSCSCGGGCCHHHH
T ss_pred             ccCccccCCCCCcCCcCchhh
Confidence            1      23679999999986

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.7e-34  Score=248.58  Aligned_cols=175  Identities=17%  Similarity=0.226  Sum_probs=150.2

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRY  182 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~  182 (282)
                      .+.+..++|++.+.||+|+||.||+|++........+..||+|++....  .....+.+.+|+.+++.+ +||||+++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   94 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLG   94 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence            3556677999999999999999999997654444667889999997653  223456788999999999 8999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCC
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQG------------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPE  244 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~  244 (282)
                      ++...+..++||||+++|+|.+++....                  .+++..+..++.|++.||.|||++||+||||||+
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  174 (313)
T 1t46_A           95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR  174 (313)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence            9999999999999999999999997653                  3899999999999999999999999999999999


Q ss_pred             ceEEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          245 NILMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       245 NILl~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      |||++.++.+||+|||++......         .+++.|+|||.+
T Consensus       175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  219 (313)
T 1t46_A          175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI  219 (313)
T ss_dssp             GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH
T ss_pred             eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHh
Confidence            999999999999999998642211         346789999975

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.2e-34  Score=244.92  Aligned_cols=167  Identities=22%  Similarity=0.307  Sum_probs=142.5

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+.+..++|++++.||+|+||.||++.++      .+..||+|++......    .+.+.+|+.+++.++|+||++++++
T Consensus        18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~   87 (283)
T 3gen_A           18 SWEIDPKDLTFLKELGTGQFGVVKYGKWR------GQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGV   87 (283)
T ss_dssp             TTBCCGGGEEEEEECC---CEEEEEEEET------TTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CccCCHHHHHhHhhcCCCCCceEEEEEEc------CCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEE
Confidence            34566779999999999999999999875      3456999999765322    2457889999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +...+..|+||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus        88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~  167 (283)
T 3gen_A           88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS  167 (283)
T ss_dssp             ECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGG
T ss_pred             EecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccc
Confidence            9999999999999999999999976 456999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc--------chhheeeccCccc
Q 023430          263 HNQLC--------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~--------~~~~~~~~ape~~  280 (282)
                      .....        ..+++.|+|||.+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~  193 (283)
T 3gen_A          168 RYVLDDEYTSSVGSKFPVRWSPPEVL  193 (283)
T ss_dssp             GGBCCHHHHSTTSTTSCGGGCCHHHH
T ss_pred             ccccccccccccCCccCcccCCHHHh
Confidence            64322        2446789999986

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=5.6e-34  Score=255.63  Aligned_cols=160  Identities=25%  Similarity=0.424  Sum_probs=133.1

Q ss_pred             CCCeEEE-eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHH-HhcCCCCeeeeeEEEEe
Q 023430          109 PGDFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL-TKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       109 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~  186 (282)
                      .++|.+. ++||+|+||+||+|.++     .++..||||++...        ..+.+|+.++ +..+||||+++++++..
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~  126 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNK-----RTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYEN  126 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEEC-----CCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEee
Confidence            3578887 78999999999999977     45778999998642        2356788876 45589999999999875


Q ss_pred             ----CCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---CCcEEEE
Q 023430          187 ----RSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---DGHVMAA  257 (282)
Q Consensus       187 ----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---~~~v~l~  257 (282)
                          ...+|||||||+||+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+
T Consensus       127 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~  206 (400)
T 1nxk_A          127 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT  206 (400)
T ss_dssp             EETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred             cccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEE
Confidence                567999999999999999997653  4899999999999999999999999999999999999998   7899999


Q ss_pred             ecCcccccc------cchhheeeccCcccc
Q 023430          258 HSLNSHNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       258 Dfg~s~~~~------~~~~~~~~~ape~~~  281 (282)
                      |||+++...      ...||+.|||||++.
T Consensus       207 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  236 (400)
T 1nxk_A          207 DFGFAKETTSHNSLTTPCYTPYYVAPEVLG  236 (400)
T ss_dssp             CCTTCEECC-----------CTTCCGGGSC
T ss_pred             ecccccccCCCCccccCCCCCCccCHhhcC
Confidence            999996422      226699999999873

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.8e-34  Score=250.98  Aligned_cols=164  Identities=19%  Similarity=0.335  Sum_probs=128.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||.||+|.++     .++..||+|++....  .....+.+.+|+.+++.++||||+++++++...+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   76 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNK-----TTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIHTEN   76 (317)
T ss_dssp             ---------------CEEEEEECS-----SSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT
T ss_pred             ccceeEeeEECCCCCEEEEEEEEC-----CCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC
Confidence            357999999999999999999866     456789999987653  2223355778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .+|+||||++ ++|.+++...      ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||++
T Consensus        77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  155 (317)
T 2pmi_A           77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA  155 (317)
T ss_dssp             EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred             eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccc
Confidence            9999999998 5898888653      35899999999999999999999999999999999999999999999999998


Q ss_pred             cccc-------cchhheeeccCccc
Q 023430          263 HNQL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~-------~~~~~~~~~ape~~  280 (282)
                      ....       ...|++.|||||++
T Consensus       156 ~~~~~~~~~~~~~~~t~~y~aPE~~  180 (317)
T 2pmi_A          156 RAFGIPVNTFSSEVVTLWYRAPDVL  180 (317)
T ss_dssp             EETTSCCCCCCCCCSCCTTCCHHHH
T ss_pred             eecCCCcccCCCCcccccccCchHh
Confidence            6421       22679999999986

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=3.1e-34  Score=246.62  Aligned_cols=171  Identities=19%  Similarity=0.272  Sum_probs=143.7

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++++.||+|+||.||+|++.... ...+..||||++....   ....+.+.+|+.+++.++||||+++++++.
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   81 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQ-DNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVCY   81 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTC-SSCCEEEEEEEESCCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEeccc-CCCCcEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            345578999999999999999999865432 2467889999987542   344567889999999999999999999986


Q ss_pred             eC--CEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          186 TR--SKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       186 ~~--~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ..  ..+++||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           82 SAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             HHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             cCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence            43  56899999999999999997754 4899999999999999999999999999999999999999999999999999


Q ss_pred             ccccc----------chhheeeccCccc
Q 023430          263 HNQLC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~----------~~~~~~~~ape~~  280 (282)
                      .....          ..++..|+|||.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~  189 (295)
T 3ugc_A          162 KVLPQDKEFFKVKEPGESPIFWYAPESL  189 (295)
T ss_dssp             C-------------CTTCGGGGCCHHHH
T ss_pred             ccccCCcceeeeccCCCCccceeCcHHh
Confidence            64221          1346679999976

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=7.8e-34  Score=247.89  Aligned_cols=160  Identities=28%  Similarity=0.503  Sum_probs=127.7

Q ss_pred             CeEEE---eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEe
Q 023430          111 DFEIF---RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQT  186 (282)
Q Consensus       111 ~y~~~---~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~  186 (282)
                      +|++.   +.||+|+||.||+|.++     .++..||||++.+..      ...+.+|+.+++.+. ||||+++++++.+
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~   77 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHK-----KSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHD   77 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEET-----TTCCEEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             ccccccCCCccccCCCeEEEEEEEC-----CCCCEEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEEEEEEc
Confidence            46664   68999999999999987     456789999986542      244678999999997 9999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC---cEEEEecCccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG---HVMAAHSLNSH  263 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~---~v~l~Dfg~s~  263 (282)
                      ....|+||||+++|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++   .+||+|||++.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~  157 (325)
T 3kn6_A           78 QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR  157 (325)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred             CCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence            999999999999999999999888899999999999999999999999999999999999998766   89999999996


Q ss_pred             ccc-------cchhheeeccCcccc
Q 023430          264 NQL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~-------~~~~~~~~~ape~~~  281 (282)
                      ...       ...|++.|||||.+.
T Consensus       158 ~~~~~~~~~~~~~~t~~y~aPE~~~  182 (325)
T 3kn6_A          158 LKPPDNQPLKTPCFTLHYAAPELLN  182 (325)
T ss_dssp             ECCC---------------------
T ss_pred             ecCCCCCcccccCCCcCccCHHHhc
Confidence            321       225699999999873

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.3e-34  Score=246.80  Aligned_cols=163  Identities=20%  Similarity=0.345  Sum_probs=140.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++++.||+|+||.||+|++.      .++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~------~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNN------YGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR   74 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET------TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC
T ss_pred             ccchhhhhcccCCCEEEEEEEcC------CCCEEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCe
Confidence            58999999999999999999863      456799999876542 22233557789999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ---  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~---  265 (282)
                      .++||||+++ +|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...   
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           75 LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             EEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             EEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence            9999999986 888888754 56899999999999999999999999999999999999999999999999998632   


Q ss_pred             ----ccchhheeeccCccc
Q 023430          266 ----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ----~~~~~~~~~~ape~~  280 (282)
                          ....+++.|||||.+
T Consensus       154 ~~~~~~~~~t~~y~aPE~~  172 (288)
T 1ob3_A          154 VRKYTHEIVTLWYRAPDVL  172 (288)
T ss_dssp             --------CCCTTCCHHHH
T ss_pred             ccccccccccccccCchhe
Confidence                122569999999986

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3.9e-34  Score=251.52  Aligned_cols=159  Identities=25%  Similarity=0.396  Sum_probs=138.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~  188 (282)
                      ++|++.+.||+|+||.||+|.++     .+++.||+|++.+....       ..+|++++..+ +||||+++++++.+..
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~   89 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHK-----ATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGK   89 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred             ccEEEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCC
Confidence            47999999999999999999987     45778999999765321       34588888887 7999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC----CcEEEEecCcccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD----GHVMAAHSLNSHN  264 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~----~~v~l~Dfg~s~~  264 (282)
                      .+|+||||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+..+    +.+||+|||++..
T Consensus        90 ~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           90 YVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            999999999999999999888889999999999999999999999999999999999998543    3599999999963


Q ss_pred             cc-------cchhheeeccCccc
Q 023430          265 QL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~-------~~~~~~~~~ape~~  280 (282)
                      ..       ...|++.|||||++
T Consensus       170 ~~~~~~~~~~~~gt~~y~aPE~~  192 (342)
T 2qr7_A          170 LRAENGLLMTPCYTANFVAPEVL  192 (342)
T ss_dssp             CBCTTCCBCCSSCCSSCCCHHHH
T ss_pred             CcCCCCceeccCCCccccCHHHh
Confidence            22       22569999999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=6.5e-34  Score=242.33  Aligned_cols=163  Identities=27%  Similarity=0.419  Sum_probs=145.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|.++     ..+..+|+|++.....   ...+.+.+|+.+++.++||||+++++++.....
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   80 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQK-----GTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTD   80 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeC-----CCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCe
Confidence            46999999999999999999977     3566799999876532   234568899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE---cCCCcEEEEecCccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM---DSDGHVMAAHSLNSHNQ-  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl---~~~~~v~l~Dfg~s~~~-  265 (282)
                      .++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+   +.++.++|+|||++... 
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            99999999999999999888889999999999999999999999999999999999999   78899999999998532 


Q ss_pred             -----ccchhheeeccCccc
Q 023430          266 -----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 -----~~~~~~~~~~ape~~  280 (282)
                           ....|++.|+|||.+
T Consensus       161 ~~~~~~~~~~t~~y~aPE~~  180 (277)
T 3f3z_A          161 PGKMMRTKVGTPYYVSPQVL  180 (277)
T ss_dssp             TTSCBCCCCSCTTTCCHHHH
T ss_pred             CccchhccCCCCCccChHHh
Confidence                 222679999999986

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.8e-34  Score=245.27  Aligned_cols=172  Identities=20%  Similarity=0.235  Sum_probs=138.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.+.||+|+||.||+|.+....  ..+..||+|++....  .....+.+.+|+.+++.++||||+++++++
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   85 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPE--NPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVI   85 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC----CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCC--CCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEE
Confidence            4456678999999999999999999986432  345679999886542  234456788999999999999999999998


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      . .+..|+||||+++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        86 ~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  164 (281)
T 1mp8_A           86 T-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  164 (281)
T ss_dssp             C-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             c-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccc
Confidence            4 567899999999999999997654 58999999999999999999999999999999999999999999999999996


Q ss_pred             cccc--------chhheeeccCcccc
Q 023430          264 NQLC--------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~--------~~~~~~~~ape~~~  281 (282)
                      ....        ..+++.|+|||.++
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (281)
T 1mp8_A          165 YMEDSTYYKASKGKLPIKWMAPESIN  190 (281)
T ss_dssp             --------------CCGGGCCHHHHH
T ss_pred             ccCcccccccccCCCcccccChhhcc
Confidence            4221        24467899999863

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=6e-34  Score=256.95  Aligned_cols=166  Identities=25%  Similarity=0.423  Sum_probs=138.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-----hhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-----KNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .++|.+.+.||+|+||.||+|.++     .+++.||||++.+.....     ......+.+|+.+|+.++||||++++++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~  208 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFER-----KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF  208 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEE
T ss_pred             hccEEEEeEEeeCCCeEEEEEEEC-----CCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            358999999999999999999977     456789999997654221     1122347789999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC---cEEEEecC
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG---HVMAAHSL  260 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~---~v~l~Dfg  260 (282)
                      +. .+..|+||||+++|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++   .+||+|||
T Consensus       209 ~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          209 FD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             EE-SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             Ee-cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence            75 456899999999999999888788899999999999999999999999999999999999997654   49999999


Q ss_pred             ccccccc------chhheeeccCccc
Q 023430          261 NSHNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~------~~~~~~~~ape~~  280 (282)
                      ++.....      ..|++.|||||++
T Consensus       288 ~a~~~~~~~~~~~~~gt~~y~aPE~~  313 (419)
T 3i6u_A          288 HSKILGETSLMRTLCGTPTYLAPEVL  313 (419)
T ss_dssp             TTTSCC-----------CTTCCTTTT
T ss_pred             cceecCCCccccccCCCCCccCceee
Confidence            9964221      2579999999987

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=4.5e-34  Score=248.74  Aligned_cols=167  Identities=27%  Similarity=0.388  Sum_probs=146.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh---hHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK---NHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ++|++.+.||+|+||.||+|+++     .++..||+|++........   ...+.+.+|+.+++.++||||+++++++..
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   86 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREK-----STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN   86 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             ccEEEeeEeeecCCEEEEEEEEC-----CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence            46999999999999999999977     4567899999976542221   135668899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC----cEEEEecCcc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG----HVMAAHSLNS  262 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~----~v~l~Dfg~s  262 (282)
                      ....++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++    .++|+|||++
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~  166 (321)
T 2a2a_A           87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (321)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence            999999999999999999998888899999999999999999999999999999999999999888    7999999999


Q ss_pred             cccc------cchhheeeccCcccc
Q 023430          263 HNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~------~~~~~~~~~ape~~~  281 (282)
                      ....      ...|++.|+|||.+.
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~  191 (321)
T 2a2a_A          167 HEIEDGVEFKNIFGTPEFVAPEIVN  191 (321)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred             eecCccccccccCCCCCccCccccc
Confidence            6422      225799999999864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=8.1e-34  Score=243.09  Aligned_cols=164  Identities=24%  Similarity=0.377  Sum_probs=142.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|.+.+.||+|+||.||+|+++     ..+..+|+|++.....  ....+.+.+|+.+++.++||||+++++++.....
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   94 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEER-----SSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN   94 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             hheeecceeccCCCeEEEEEEEc-----cCCceEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHheecCCe
Confidence            47999999999999999999976     4567899999876542  3335668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE---cCCCcEEEEecCcc
Q 023430          190 LYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM---DSDGHVMAAHSLNS  262 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl---~~~~~v~l~Dfg~s  262 (282)
                      .++||||+++++|.+++..    ...+++..+..++.|++.||.|||++||+||||||+|||+   +.++.++|+|||++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            9999999999999888854    3679999999999999999999999999999999999999   45688999999999


Q ss_pred             ccc------ccchhheeeccCccc
Q 023430          263 HNQ------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~------~~~~~~~~~~ape~~  280 (282)
                      ...      ....|++.|+|||.+
T Consensus       175 ~~~~~~~~~~~~~~t~~y~aPE~~  198 (285)
T 3is5_A          175 ELFKSDEHSTNAAGTALYMAPEVF  198 (285)
T ss_dssp             CC----------CTTGGGCCHHHH
T ss_pred             eecCCcccCcCcccccCcCChHHh
Confidence            632      222679999999976

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=5.9e-34  Score=241.43  Aligned_cols=165  Identities=22%  Similarity=0.300  Sum_probs=143.1

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|+++      .+..||+|++.....    ..+.+.+|+.+++.++||||+++++++.
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~   73 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK------GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLSHPKLVKFYGVCS   73 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET------TTEEEEEEEECBTTB----CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             EechhheeeeeeeccCCCceEEEEEec------CceeEEEEEeccCCC----cHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            345678999999999999999999875      345699999976542    2245788999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .....++||||+++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~  153 (268)
T 3sxs_A           74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRY  153 (268)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEE
T ss_pred             cCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCcccee
Confidence            9999999999999999999987654 489999999999999999999999999999999999999999999999999863


Q ss_pred             cccc--------hhheeeccCccc
Q 023430          265 QLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~~--------~~~~~~~ape~~  280 (282)
                      ....        .+++.|+|||.+
T Consensus       154 ~~~~~~~~~~~~~~~~~y~aPE~~  177 (268)
T 3sxs_A          154 VLDDQYVSSVGTKFPVKWSAPEVF  177 (268)
T ss_dssp             CCTTCEEECCSCCCCGGGCCHHHH
T ss_pred             cchhhhhcccCCCcCcccCCHHHH
Confidence            2221        335679999986

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=8.9e-34  Score=245.92  Aligned_cols=164  Identities=24%  Similarity=0.364  Sum_probs=141.9

Q ss_pred             CCCeEEE-eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEe
Q 023430          109 PGDFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQT  186 (282)
Q Consensus       109 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~  186 (282)
                      .+.|++. +.||+|+||.||+|+++     .+++.||||++....   ....+.+.+|+.+++.+ +||||+++++++..
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~   82 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINL-----ITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEE   82 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECS-----SSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEc-----CCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            3579885 78999999999999866     456789999997643   23345688899999885 79999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc---EEEEecCccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH---VMAAHSLNSH  263 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~---v~l~Dfg~s~  263 (282)
                      .+.+|+||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.   +||+|||++.
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A           83 EDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             CCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            9999999999999999999988888999999999999999999999999999999999999998776   9999999986


Q ss_pred             ccc--------------cchhheeeccCccc
Q 023430          264 NQL--------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~--------------~~~~~~~~~ape~~  280 (282)
                      ...              ...|++.|+|||.+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  193 (316)
T 2ac3_A          163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVV  193 (316)
T ss_dssp             -------------------CCSGGGCCHHHH
T ss_pred             ccccCCccccccccccccccCCcCccChHHh
Confidence            321              11489999999986

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=5.3e-34  Score=249.21  Aligned_cols=174  Identities=16%  Similarity=0.259  Sum_probs=149.8

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      +.+..++|++.+.||+|+||.||+|.+..++.......||+|++....  .....+.+.+|+.+++.+ +||||++++++
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            456678999999999999999999998876555556789999987643  233456688999999999 89999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ--------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD  249 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~--------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~  249 (282)
                      +...+..++||||+++|+|.+++...              ..+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            99999999999999999999988653              3578999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          250 SDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       250 ~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      .++.++|+|||++.....+         .+++.|||||.+
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  238 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI  238 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHh
Confidence            9999999999999743221         346689999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=5.9e-34  Score=262.12  Aligned_cols=165  Identities=27%  Similarity=0.418  Sum_probs=140.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|++++.||+|+||.||+|+++     ..+..||+|++.+..... ...+.+.+|+.+++.++||||+++++++.....+
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  111 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDK-----VTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY  111 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEET-----TTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CeEEeeEEecCCCEEEEEEEEC-----CCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            6999999999999999999987     456789999998654322 2345688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEEEecCccccc--
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMAAHSLNSHNQ--  265 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l~Dfg~s~~~--  265 (282)
                      |+|||||.+|+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++..   +.+||+|||++...  
T Consensus       112 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~  191 (494)
T 3lij_A          112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN  191 (494)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence            9999999999999999888889999999999999999999999999999999999999764   45999999998532  


Q ss_pred             ----ccchhheeeccCcccc
Q 023430          266 ----LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ----~~~~~~~~~~ape~~~  281 (282)
                          ....|++.|||||++.
T Consensus       192 ~~~~~~~~gt~~y~aPE~l~  211 (494)
T 3lij_A          192 QKKMKERLGTAYYIAPEVLR  211 (494)
T ss_dssp             TBCBCCCCSCTTTCCHHHHT
T ss_pred             CccccccCCCcCeeCHHHHc
Confidence                2226899999999863

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.6e-34  Score=249.98  Aligned_cols=177  Identities=17%  Similarity=0.264  Sum_probs=148.2

Q ss_pred             hhhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCC--CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCee
Q 023430          102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIV  178 (282)
Q Consensus       102 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv  178 (282)
                      ...+.+..++|++.+.||+|+||.||+|++.+...  ...+..||+|++....  .....+.+.+|+.+++.+ +||||+
T Consensus        27 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv  104 (334)
T 2pvf_A           27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNII  104 (334)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEe
Confidence            34455667899999999999999999999864322  2356679999997543  234456788999999999 899999


Q ss_pred             eeeEEEEeCCEEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccC
Q 023430          179 QLRYSFQTRSKLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLK  242 (282)
Q Consensus       179 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlK  242 (282)
                      ++++++...+.+|+||||+++++|.+++....                .+++..++.++.|++.||.|||++||+|||||
T Consensus       105 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  184 (334)
T 2pvf_A          105 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA  184 (334)
T ss_dssp             CEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCc
Confidence            99999999999999999999999999997643                38899999999999999999999999999999


Q ss_pred             CCceEEcCCCcEEEEecCcccccc---------cchhheeeccCccc
Q 023430          243 PENILMDSDGHVMAAHSLNSHNQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       243 p~NILl~~~~~v~l~Dfg~s~~~~---------~~~~~~~~~ape~~  280 (282)
                      |+|||++.++.+||+|||++....         ...+++.|+|||.+
T Consensus       185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  231 (334)
T 2pvf_A          185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL  231 (334)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH
T ss_pred             cceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHh
Confidence            999999999999999999986321         12446789999976

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=7.2e-34  Score=251.15  Aligned_cols=171  Identities=23%  Similarity=0.320  Sum_probs=150.4

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      ...+..++|++.+.||+|+||.||+|.++     ..+..||+|++....  .....+.+.+|+.+++.++||||++++++
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   99 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHK-----PSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGA   99 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEEC-----CCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEE
Confidence            34566789999999999999999999977     456789999987653  23445678899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      +...+..++||||+++++|.+++...+.+++..+..++.|++.||.|||++ ||+||||||+|||++.++.++|+|||++
T Consensus       100 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  179 (360)
T 3eqc_A          100 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS  179 (360)
T ss_dssp             EEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred             EEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCC
Confidence            999999999999999999999998888899999999999999999999986 9999999999999999999999999998


Q ss_pred             ccc-----ccchhheeeccCcccc
Q 023430          263 HNQ-----LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~-----~~~~~~~~~~ape~~~  281 (282)
                      ...     ....|++.|+|||.+.
T Consensus       180 ~~~~~~~~~~~~gt~~y~aPE~~~  203 (360)
T 3eqc_A          180 GQLIDSMANSFVGTRSYMSPERLQ  203 (360)
T ss_dssp             HHHHHHC----CCCCTTCCHHHHT
T ss_pred             cccccccccCCCCCCCeECHHHHc
Confidence            532     2226799999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.2e-33  Score=241.30  Aligned_cols=165  Identities=20%  Similarity=0.261  Sum_probs=142.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~  188 (282)
                      ++|++.+.||+|+||.||+|.++     .+++.||+|++...... ......+.+|+..+..+ +||||+++++++...+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~   84 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKR-----LDGCIYAIKRSKKPLAG-SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD   84 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCCTT-SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT
T ss_pred             chhhhhhhhcCCCceEEEEEEEc-----CCCceEEEEEecccccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC
Confidence            47999999999999999999976     45678999998765332 23345577899999998 8999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-------------
Q 023430          189 KLYLILDFINGGHLFFHLYRQ----GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-------------  251 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-------------  251 (282)
                      ..++||||+++++|.+++...    ..+++..+..++.|++.||.|||++||+||||||+|||++.+             
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~  164 (289)
T 1x8b_A           85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDED  164 (289)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---------------
T ss_pred             eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence            999999999999999998764    668999999999999999999999999999999999999844             


Q ss_pred             ------CcEEEEecCcccccc---cchhheeeccCccc
Q 023430          252 ------GHVMAAHSLNSHNQL---CCFFFFLFLGGGVF  280 (282)
Q Consensus       252 ------~~v~l~Dfg~s~~~~---~~~~~~~~~ape~~  280 (282)
                            ..++|+|||.+....   ...|++.|+|||.+
T Consensus       165 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~  202 (289)
T 1x8b_A          165 DWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVL  202 (289)
T ss_dssp             -----CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHH
T ss_pred             cccCCceEEEEcccccccccCCccccCCCccccChhHh
Confidence                  479999999986422   23579999999986

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.2e-33  Score=246.17  Aligned_cols=162  Identities=22%  Similarity=0.325  Sum_probs=142.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|+..+.||+|+||.||+|+.+     ..++.||||++....   ....+.+.+|+.+++.++||||+++++++...+..
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~-----~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  117 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREK-----HSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEEL  117 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             hhhccEEeccCCCeEEEEEEEC-----CCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEE
Confidence            3888899999999999999976     356789999987543   23345688899999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc----
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL----  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~----  266 (282)
                      |+||||+++++|.+++. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....    
T Consensus       118 ~lv~e~~~~~~L~~~l~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~  196 (321)
T 2c30_A          118 WVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP  196 (321)
T ss_dssp             EEEECCCCSCBHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred             EEEEecCCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc
Confidence            99999999999998875 4568999999999999999999999999999999999999999999999999985322    


Q ss_pred             ---cchhheeeccCcccc
Q 023430          267 ---CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ---~~~~~~~~~ape~~~  281 (282)
                         ...|++.|||||.+.
T Consensus       197 ~~~~~~gt~~y~aPE~~~  214 (321)
T 2c30_A          197 KRKSLVGTPYWMAPEVIS  214 (321)
T ss_dssp             CBCCCCSCGGGCCHHHHT
T ss_pred             ccccccCCccccCHhhhc
Confidence               226799999999863

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=5.3e-34  Score=252.57  Aligned_cols=173  Identities=17%  Similarity=0.109  Sum_probs=139.8

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHH--------HHHHHHHHHHHhcCCCCeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHV--------DYMKAERDILTKVTHPFIVQ  179 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~--------~~~~~E~~~l~~l~h~nIv~  179 (282)
                      ..++|++.+.||+|+||.||+|.++.......++.||||++...........        ..+..|+..++.++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            4568999999999999999999987654444567899999876532111111        11334566777889999999


Q ss_pred             eeEEEEeC----CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc--CCC
Q 023430          180 LRYSFQTR----SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD--SDG  252 (282)
Q Consensus       180 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~--~~~  252 (282)
                      +++++...    ...||||||+ +++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++  .++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTT
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCC
Confidence            99998764    4589999999 99999999775 5799999999999999999999999999999999999999  889


Q ss_pred             cEEEEecCccccccc--------------chhheeeccCcccc
Q 023430          253 HVMAAHSLNSHNQLC--------------CFFFFLFLGGGVFN  281 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~~--------------~~~~~~~~ape~~~  281 (282)
                      .+||+|||+++....              ..||+.|||||.+.
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  234 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN  234 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhC
Confidence            999999999953211              13899999999863

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-33  Score=248.27  Aligned_cols=165  Identities=23%  Similarity=0.315  Sum_probs=143.3

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC--CCeeeeeEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH--PFIVQLRYSF  184 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~  184 (282)
                      +..+.|++.+.||+|+||.||++.+.      .+..||||++..... .....+.+.+|+.+|+.++|  +||+++++++
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   78 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   78 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT------TSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC------CCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeE
Confidence            34567999999999999999999853      467899999976542 33445678899999999986  9999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .....+|+||| +.+++|.+++...+.+++.++..++.|++.||.|||++||+||||||+|||++ ++.+||+|||++..
T Consensus        79 ~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~  156 (343)
T 3dbq_A           79 ITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQ  156 (343)
T ss_dssp             ECSSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred             eeCCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccc
Confidence            99999999999 56789999999888899999999999999999999999999999999999997 68899999999964


Q ss_pred             cc---------cchhheeeccCccc
Q 023430          265 QL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~---------~~~~~~~~~ape~~  280 (282)
                      ..         ...|++.|||||.+
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~~  181 (343)
T 3dbq_A          157 MQPDTTSVVKDSQVGTVNYMPPEAI  181 (343)
T ss_dssp             C------------CCCCSSCCHHHH
T ss_pred             cCcccccccCCCCcCCcCcCCHHHH
Confidence            21         22579999999986

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=5e-34  Score=248.69  Aligned_cols=165  Identities=18%  Similarity=0.183  Sum_probs=140.7

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.++||+|+||.||+|++.       ++.||||++....    .......+|+.+++.++||||+++++++
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~   87 (322)
T 3soc_A           19 LYFQSMPLQLLEVKARGRFGCVWKAQLL-------NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAE   87 (322)
T ss_dssp             EEETTEEEEEEEEEECSTTCEEEEEEET-------TEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred             cccchhhchhhheecccCceEEEEEEEC-------CCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhccee
Confidence            3455678999999999999999999864       4679999996543    2223455689999999999999999999


Q ss_pred             EeCC----EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----------CCEeeccCCCceEEcC
Q 023430          185 QTRS----KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC----------GIVHRDLKPENILMDS  250 (282)
Q Consensus       185 ~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~----------~iiHrDlKp~NILl~~  250 (282)
                      ....    .+|+||||+++|+|.+++.. ..+++..+..++.|++.||.|||++          ||+||||||+|||++.
T Consensus        88 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~  166 (322)
T 3soc_A           88 KRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN  166 (322)
T ss_dssp             EEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECT
T ss_pred             ccCCCCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECC
Confidence            8744    47999999999999999965 4589999999999999999999999          9999999999999999


Q ss_pred             CCcEEEEecCcccccc---------cchhheeeccCcccc
Q 023430          251 DGHVMAAHSLNSHNQL---------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       251 ~~~v~l~Dfg~s~~~~---------~~~~~~~~~ape~~~  281 (282)
                      ++.+||+|||++....         ...|++.|+|||.+.
T Consensus       167 ~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  206 (322)
T 3soc_A          167 NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE  206 (322)
T ss_dssp             TCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHT
T ss_pred             CCeEEEccCCcccccccccCccccccCccCccccCHhhcc
Confidence            9999999999995311         125799999999863

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=6.5e-34  Score=259.77  Aligned_cols=163  Identities=21%  Similarity=0.321  Sum_probs=136.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++++.||+|+||.||+|.++     .+++.||||++.+.. ......+.+.+|+.+|+.++||||+++++++... 
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~  134 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK  134 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEET-----TTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEEC-----CCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCC
Confidence            468999999999999999999977     457789999997653 2334456788999999999999999999999654 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                           ..+|+||||++++ |...+.  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus       135 ~~~~~~~~~lv~E~~~~~-l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a  211 (464)
T 3ttj_A          135 TLEEFQDVYLVMELMDAN-LCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA  211 (464)
T ss_dssp             STTTCCEEEEEEECCSEE-HHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred             ccccCCeEEEEEeCCCCC-HHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEee
Confidence                 4689999999875 555553  35899999999999999999999999999999999999999999999999999


Q ss_pred             ccccc------chhheeeccCccc
Q 023430          263 HNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~------~~~~~~~~ape~~  280 (282)
                      +....      ..||+.|+|||++
T Consensus       212 ~~~~~~~~~~~~~gt~~y~aPE~~  235 (464)
T 3ttj_A          212 RTAGTSFMMTPYVVTRYYRAPEVI  235 (464)
T ss_dssp             -----CCCC----CCCTTCCHHHH
T ss_pred             eecCCCcccCCCcccccccCHHHH
Confidence            64322      2679999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=7.8e-34  Score=248.13  Aligned_cols=162  Identities=16%  Similarity=0.174  Sum_probs=141.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  187 (282)
                      .++|++.+.||+|+||.||+|++.     .+++.||||++.....     .+.+.+|+.+++.+ +|+||+++++++...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   77 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNL-----YTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCG   77 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEET-----TTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEET
T ss_pred             cCCeEEEEEeeccCCceEEEEEEC-----CCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecC
Confidence            468999999999999999999976     4577899999875432     12377899999999 899999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc-----EEEEecCc
Q 023430          188 SKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH-----VMAAHSLN  261 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~-----v~l~Dfg~  261 (282)
                      ...++||||+ +++|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+|||++.++.     +||+|||+
T Consensus        78 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A           78 KYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred             CccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence            9999999999 9999999976 367999999999999999999999999999999999999999887     99999999


Q ss_pred             cccc--------------ccchhheeeccCcccc
Q 023430          262 SHNQ--------------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~--------------~~~~~~~~~~ape~~~  281 (282)
                      +...              ....||+.|||||.+.
T Consensus       157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  190 (330)
T 2izr_A          157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHL  190 (330)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT
T ss_pred             ceeeecCCCCccccccccCCcCCCccccChHHHc
Confidence            9632              1236799999999863

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.1e-33  Score=252.64  Aligned_cols=164  Identities=22%  Similarity=0.385  Sum_probs=132.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~  187 (282)
                      .++|++++.||+|+||.||+|.++     .+++.||||++.... ......+.+.+|+.+++.+. ||||+++++++...
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~   81 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDR-----RTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD   81 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEET-----TTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT
T ss_pred             cCceEEEEEeeeCCCeEEEEEEEC-----CCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC
Confidence            358999999999999999999977     457789999986543 22344556778999999997 99999999999765


Q ss_pred             C--EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 S--KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 ~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      +  .+|+|||||+ ++|..++.. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus        82 ~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           82 NDRDVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             TSSCEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             CCCEEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence            4  7999999998 588888865 57899999999999999999999999999999999999999999999999999642


Q ss_pred             cc----------------------------chhheeeccCccc
Q 023430          266 LC----------------------------CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~----------------------------~~~~~~~~ape~~  280 (282)
                      ..                            ..||+.|||||++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  202 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEIL  202 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHH
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHHh
Confidence            11                            1579999999976

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=8.5e-34  Score=258.19  Aligned_cols=167  Identities=20%  Similarity=0.316  Sum_probs=144.6

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeE
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRY  182 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~  182 (282)
                      ..+.+..++|++.+.||+|+||.||++.+.       +..||||+++...     ..+.+.+|+.+|+.++||||+++++
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-------~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~  253 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYR-------GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLG  253 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEET-------TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEec-------CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEE
Confidence            456677889999999999999999999865       4579999997543     2356888999999999999999999


Q ss_pred             EEEeCC-EEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          183 SFQTRS-KLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       183 ~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                      ++.... .+|+||||+++|+|.+++...+.  +++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+||
T Consensus       254 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~Df  333 (450)
T 1k9a_A          254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDF  333 (450)
T ss_dssp             EEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCC
T ss_pred             EEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeC
Confidence            987655 79999999999999999987543  789999999999999999999999999999999999999999999999


Q ss_pred             Ccccccccc----hhheeeccCcccc
Q 023430          260 LNSHNQLCC----FFFFLFLGGGVFN  281 (282)
Q Consensus       260 g~s~~~~~~----~~~~~~~ape~~~  281 (282)
                      |+++.....    .++..|||||.+.
T Consensus       334 G~a~~~~~~~~~~~~~~~y~aPE~~~  359 (450)
T 1k9a_A          334 GLTKEASSTQDTGKLPVKWTAPEALR  359 (450)
T ss_dssp             TTCEECC------CCCTTTSCHHHHH
T ss_pred             CCcccccccccCCCCCcceeCHHHhc
Confidence            999743222    4478899999863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.6e-33  Score=248.90  Aligned_cols=164  Identities=27%  Similarity=0.394  Sum_probs=142.4

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-----CCCeeeee
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-----HPFIVQLR  181 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~nIv~l~  181 (282)
                      +..++|++.++||+|+||.||+|++.     ..++.||||++....    ...+.+..|+.+++.+.     ||||++++
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~  102 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHI-----DNKKYYAVKVVRNIK----KYTRSAKIEADILKKIQNDDINNNNIVKYH  102 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEECSCH----HHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEEC-----CCCeEEEEEEeccch----hhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence            44578999999999999999999986     356789999986432    23345677999999986     99999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---------
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---------  250 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---------  250 (282)
                      +++...+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.         
T Consensus       103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~  181 (360)
T 3llt_A          103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLIT  181 (360)
T ss_dssp             EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEE
T ss_pred             ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccc
Confidence            9999999999999999 889999998754  4899999999999999999999999999999999999975         


Q ss_pred             ----------------CCcEEEEecCcccccc----cchhheeeccCccc
Q 023430          251 ----------------DGHVMAAHSLNSHNQL----CCFFFFLFLGGGVF  280 (282)
Q Consensus       251 ----------------~~~v~l~Dfg~s~~~~----~~~~~~~~~ape~~  280 (282)
                                      ++.+||+|||++....    ...|++.|||||.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~  231 (360)
T 3llt_A          182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVI  231 (360)
T ss_dssp             EECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHH
T ss_pred             hhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHH
Confidence                            7899999999996322    22679999999986

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.7e-34  Score=255.41  Aligned_cols=171  Identities=20%  Similarity=0.230  Sum_probs=139.3

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|+++..  ...+..||||+++...  .....+.+.+|+.+++.++||||+++++++.
T Consensus        41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~--~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  116 (373)
T 2qol_A           41 ELDATNISIDKVVGAGEFGEVCSGRLKLP--SKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVT  116 (373)
T ss_dssp             BCCGGGCCCCEEEEECSSSEEEEC-CBCT--TSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             hcCHhhceeeeEEeeCCCeEEEEEEEecC--CCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            44556899999999999999999986532  2346679999987543  2344567889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ..+..++||||+++|+|.+++...+ .+++.++..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  196 (373)
T 2qol_A          117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV  196 (373)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             eCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence            9999999999999999999997654 589999999999999999999999999999999999999999999999999964


Q ss_pred             cccc----------hhheeeccCccc
Q 023430          265 QLCC----------FFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~~----------~~~~~~~ape~~  280 (282)
                      ...+          .++..|||||.+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~  222 (373)
T 2qol_A          197 LEDDPEAAYTTRGGKIPIRWTSPEAI  222 (373)
T ss_dssp             -----------------CTTSCHHHH
T ss_pred             cccCCccceeccCCCcCCCccChhhh
Confidence            3221          235679999986

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=4.5e-34  Score=249.67  Aligned_cols=165  Identities=16%  Similarity=0.263  Sum_probs=137.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||.||+|++.     ..++.||||++..... .....+.+.+|+.+++.++||||+++++++....
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDT-----VTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH  106 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETT
T ss_pred             hhhEEEEEEEEecCCeEEEEEEEC-----CCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCC
Confidence            468999999999999999999876     4677899999976532 2333455778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc-----CCCcEEEEecCccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD-----SDGHVMAAHSLNSH  263 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~-----~~~~v~l~Dfg~s~  263 (282)
                      .+++||||+++ +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++     .++.+||+|||++.
T Consensus       107 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          107 RLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             EEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             EEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence            99999999985 9999998888899999999999999999999999999999999999994     45569999999985


Q ss_pred             cc-------ccchhheeeccCccc
Q 023430          264 NQ-------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~-------~~~~~~~~~~ape~~  280 (282)
                      ..       ....|++.|+|||.+
T Consensus       186 ~~~~~~~~~~~~~~t~~y~aPE~~  209 (329)
T 3gbz_A          186 AFGIPIRQFTHEIITLWYRPPEIL  209 (329)
T ss_dssp             HHC-----------CCTTCCHHHH
T ss_pred             ccCCcccccCCCcCCccccCHHHh
Confidence            32       222569999999986

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=6.2e-34  Score=247.55  Aligned_cols=174  Identities=17%  Similarity=0.208  Sum_probs=147.0

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      +.+..++|++.+.||+|+||.||+|.++.......+..||+|++....  .......+.+|+.+++.++|+||+++++++
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            344557899999999999999999987743333456789999987543  223445688999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcE
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ----------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV  254 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v  254 (282)
                      ...+..++||||+++|+|.+++...          ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence            9999999999999999999988652          346899999999999999999999999999999999999999999


Q ss_pred             EEEecCccccccc---------chhheeeccCccc
Q 023430          255 MAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       255 ~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      ||+|||++.....         ..+++.|+|||.+
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  212 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL  212 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhh
Confidence            9999999963221         1346789999976

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=5.3e-34  Score=247.08  Aligned_cols=175  Identities=18%  Similarity=0.271  Sum_probs=148.8

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRY  182 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~  182 (282)
                      .+.+..++|++.+.||+|+||.||+|++.+......++.||||++....  .....+.+.+|+.+++.+ +||||+++++
T Consensus        21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   98 (316)
T 2xir_A           21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLG   98 (316)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence            4456678999999999999999999998765555677889999997653  233445688999999999 6999999999


Q ss_pred             EEEeCC-EEEEEEeccCCCchHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          183 SFQTRS-KLYLILDFINGGHLFFHLYRQGI----------------FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       183 ~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      ++...+ .+++||||+++++|.+++.....                +++..+..++.|++.||.|||++||+||||||+|
T Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~N  178 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  178 (316)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccce
Confidence            987654 59999999999999999986543                7899999999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCccccccc---------chhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      ||++.++.+||+|||++.....         ..+++.|+|||.+
T Consensus       179 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (316)
T 2xir_A          179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  222 (316)
T ss_dssp             EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH
T ss_pred             EEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhh
Confidence            9999999999999999963221         1446789999976

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.6e-33  Score=240.42  Aligned_cols=167  Identities=28%  Similarity=0.424  Sum_probs=146.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh---hHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK---NHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ++|++.+.||+|+||.||+|+++     .+++.||+|++........   ...+.+.+|+.+++.++||||+++++++..
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   79 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQK-----GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN   79 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhHHhhcccCceEEEEEEEc-----CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC
Confidence            46999999999999999999977     3567899999876543221   135678899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC----cEEEEecCcc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG----HVMAAHSLNS  262 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~----~v~l~Dfg~s  262 (282)
                      ....++||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.++    .++|+|||++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           80 KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            999999999999999999998888899999999999999999999999999999999999999887    8999999998


Q ss_pred             cccc------cchhheeeccCcccc
Q 023430          263 HNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~------~~~~~~~~~ape~~~  281 (282)
                      ....      ...+++.|+|||.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~  184 (283)
T 3bhy_A          160 HKIEAGNEFKNIFGTPEFVAPEIVN  184 (283)
T ss_dssp             EECC--------CCCGGGCCHHHHT
T ss_pred             eeccCCCcccccCCCcCccCcceec
Confidence            6422      225799999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=2.4e-33  Score=248.59  Aligned_cols=166  Identities=27%  Similarity=0.369  Sum_probs=145.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-----hhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-----IKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      ++|++.+.||+|+||.||+|+++     .++..||||++.....     ......+.+.+|+.+++.+ +||||++++++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  168 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHR-----ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS  168 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhcccceEEecCCCEEEEEEEEC-----CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            46999999999999999999976     3567899999875431     1123345678999999999 79999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +......|+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.+|.++|+|||++.
T Consensus       169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~  248 (365)
T 2y7j_A          169 YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC  248 (365)
T ss_dssp             EEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence            99999999999999999999999888889999999999999999999999999999999999999999999999999885


Q ss_pred             cc------ccchhheeeccCccc
Q 023430          264 NQ------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~------~~~~~~~~~~ape~~  280 (282)
                      ..      ....|++.|+|||++
T Consensus       249 ~~~~~~~~~~~~gt~~y~aPE~~  271 (365)
T 2y7j_A          249 HLEPGEKLRELCGTPGYLAPEIL  271 (365)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHH
T ss_pred             ccCCCcccccCCCCCCccChhhc
Confidence            32      122679999999986

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.1e-33  Score=241.89  Aligned_cols=169  Identities=22%  Similarity=0.263  Sum_probs=141.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      ...|++.+.||+|+||.||+|++.... ...++.||+|++....  .....+.+.+|+.+++.++||||+++++++... 
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEG-DNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG   96 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTS-SSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred             hhhhhhhhccCCCCceEEEEEEEcccc-CccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence            356999999999999999999865322 2467889999997653  233456788999999999999999999999876 


Q ss_pred             -CEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          188 -SKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       188 -~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                       ..+++||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        97 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  176 (302)
T 4e5w_A           97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  176 (302)
T ss_dssp             -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence             678999999999999999954 456999999999999999999999999999999999999999999999999998532


Q ss_pred             c----------cchhheeeccCccc
Q 023430          266 L----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~----------~~~~~~~~~ape~~  280 (282)
                      .          ...++..|+|||.+
T Consensus       177 ~~~~~~~~~~~~~~~~~~y~aPE~~  201 (302)
T 4e5w_A          177 ETDKEYYTVKDDRDSPVFWYAPECL  201 (302)
T ss_dssp             CTTCCEEECCCCTTCCGGGCCHHHH
T ss_pred             cCCCcceeccCCCCCCccccCCeee
Confidence            1          12457779999976

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=9.2e-35  Score=258.69  Aligned_cols=167  Identities=14%  Similarity=0.111  Sum_probs=136.9

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHH---HHHhcCCCCeeeee---
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD---ILTKVTHPFIVQLR---  181 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~---~l~~l~h~nIv~l~---  181 (282)
                      ..++|++.+.||+|+||.||+|+++     .+++.||||++...........+.+.+|+.   +|+.++||||++++   
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~  145 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQ-----ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRF  145 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC------CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCB
T ss_pred             CCceEEEcceeecCCCEEEEEEEEC-----CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhh
Confidence            3567999999999999999999975     356789999998654445556677889994   55566799999998   


Q ss_pred             ----EEEEeCC-----------------EEEEEEeccCCCchHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHHH
Q 023430          182 ----YSFQTRS-----------------KLYLILDFINGGHLFFHLYRQGIFRE-------DQARFYTAEIVSAVSHLHK  233 (282)
Q Consensus       182 ----~~~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~i~~qi~~gL~ylH~  233 (282)
                          +++...+                 ..|+||||+ +|+|.+++...+.+++       ..+..++.||+.||.|||+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  224 (377)
T 3byv_A          146 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH  224 (377)
T ss_dssp             CCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence                6666553                 289999999 6799999987554555       7777899999999999999


Q ss_pred             CCCEeeccCCCceEEcCCCcEEEEecCccccccc----chhheeeccCcccc
Q 023430          234 CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC----CFFFFLFLGGGVFN  281 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~----~~~~~~~~ape~~~  281 (282)
                      +||+||||||+|||++.+|.+||+|||++.....    ..| +.|||||.+.
T Consensus       225 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~  275 (377)
T 3byv_A          225 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEA  275 (377)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhc
Confidence            9999999999999999999999999999974221    255 9999999863

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=5.5e-33  Score=238.21  Aligned_cols=167  Identities=20%  Similarity=0.303  Sum_probs=145.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--  186 (282)
                      ...|++.+.||+|+||.||+|.+.     ..+..||+|++..... .....+.+.+|+.+++.++||||+++++++..  
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDT-----ETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV   98 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES
T ss_pred             ceeEEeeeeccCCCCeEEEEeEec-----CCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc
Confidence            345899999999999999999876     4567899999876543 33456778899999999999999999998875  


Q ss_pred             --CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEc-CCCcEEEEecCc
Q 023430          187 --RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMD-SDGHVMAAHSLN  261 (282)
Q Consensus       187 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~-~~~~v~l~Dfg~  261 (282)
                        ...+++||||+++++|.+++...+.+++..+..++.|++.||.|||+++  |+||||||+|||++ .++.++|+|||+
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~  178 (290)
T 1t4h_A           99 KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             CCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence              3568999999999999999988888999999999999999999999999  99999999999998 789999999999


Q ss_pred             cccccc-----chhheeeccCcccc
Q 023430          262 SHNQLC-----CFFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~~~-----~~~~~~~~ape~~~  281 (282)
                      +.....     ..|++.|+|||.+.
T Consensus       179 ~~~~~~~~~~~~~~t~~y~aPE~~~  203 (290)
T 1t4h_A          179 ATLKRASFAKAVIGTPEFMAPEMYE  203 (290)
T ss_dssp             GGGCCTTSBEESCSSCCCCCGGGGG
T ss_pred             cccccccccccccCCcCcCCHHHHh
Confidence            953222     25799999999863

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=4.1e-33  Score=239.70  Aligned_cols=168  Identities=28%  Similarity=0.357  Sum_probs=147.2

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh------hhhhHHHHHHHHHHHHHhcC-CCCeeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI------IKKNHVDYMKAERDILTKVT-HPFIVQL  180 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~E~~~l~~l~-h~nIv~l  180 (282)
                      ..++|++.+.||+|+||.||+|.++     .+++.||||++.....      ......+.+.+|+.+++.+. ||||+++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~   89 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHK-----PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL   89 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             hhhccceeeeecCCCceEEEEEEEc-----CcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            3578999999999999999999986     4567899999875431      11233456788999999996 9999999


Q ss_pred             eEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          181 RYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      ++++......++||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg  169 (298)
T 1phk_A           90 KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG  169 (298)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             eeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEeccc
Confidence            99999999999999999999999999888889999999999999999999999999999999999999999999999999


Q ss_pred             ccccc------ccchhheeeccCccc
Q 023430          261 NSHNQ------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~------~~~~~~~~~~ape~~  280 (282)
                      ++...      ....|++.|+|||.+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~  195 (298)
T 1phk_A          170 FSCQLDPGEKLREVCGTPSYLAPEII  195 (298)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred             chhhcCCCcccccccCCccccCHHHh
Confidence            98532      122679999999976

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.2e-33  Score=246.99  Aligned_cols=166  Identities=22%  Similarity=0.300  Sum_probs=144.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||.||+|++.     ..++.||+|++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   97 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNK-----DTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK   97 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEET-----TTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hhhheeeeEEeecCCEEEEEEEEC-----CCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC
Confidence            468999999999999999999976     456789999986543 23334456788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      ..|+||||+++++|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....  
T Consensus        98 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  177 (331)
T 4aaa_A           98 RWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  177 (331)
T ss_dssp             EEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             EEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence            999999999999998887777789999999999999999999999999999999999999999999999999996322  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...|++.|+|||.+
T Consensus       178 ~~~~~~~~~t~~y~aPE~~  196 (331)
T 4aaa_A          178 GEVYDDEVATRWYRAPELL  196 (331)
T ss_dssp             ------CCCCCTTCCHHHH
T ss_pred             ccccCCCcCCccccCcccc
Confidence                 22679999999976

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=5.1e-34  Score=262.54  Aligned_cols=168  Identities=22%  Similarity=0.267  Sum_probs=145.9

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      +.+...+|++.+.||+|+||.||+|.++     ..+..||||++....    ...+.+.+|+.+|+.++||||+++++++
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~  285 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVC  285 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEG-----GGTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEc-----CCCeEEEEEEecCcc----cchHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            4455678999999999999999999987     346789999997543    2345688999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .....+||||||+++|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++
T Consensus       286 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  365 (495)
T 1opk_A          286 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS  365 (495)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred             ecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccc
Confidence            9999999999999999999999764  45899999999999999999999999999999999999999999999999999


Q ss_pred             cccccc--------hhheeeccCcccc
Q 023430          263 HNQLCC--------FFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~~~--------~~~~~~~ape~~~  281 (282)
                      +....+        .++..|||||.+.
T Consensus       366 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  392 (495)
T 1opk_A          366 RLMTGDTYTAHAGAKFPIKWTAPESLA  392 (495)
T ss_dssp             ECCTTCCEECCTTCCCCGGGCCHHHHH
T ss_pred             eeccCCceeecCCCcCCcceeCHhHHh
Confidence            743222        2356899999863

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1e-33  Score=246.32  Aligned_cols=173  Identities=21%  Similarity=0.260  Sum_probs=132.2

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.+.||+|+||.||+|+++...  .....||||++..... .....+.+.+|+.+++.++||||+++++++
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQED--GSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC---------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccC--CcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            4456778999999999999999999876422  1223799999976542 233456788999999999999999999999


Q ss_pred             EeCCEE------EEEEeccCCCchHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC
Q 023430          185 QTRSKL------YLILDFINGGHLFFHLYRQG------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       185 ~~~~~~------~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~  252 (282)
                      ......      ++||||+.+|+|.+++....      .+++..+..++.|++.||.|||++||+||||||+|||++.++
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC
Confidence            877655      99999999999999886532      589999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccccc---------chhheeeccCccc
Q 023430          253 HVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      .+||+|||++.....         ..+++.|+|||.+
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  211 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL  211 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHH
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhh
Confidence            999999999963211         1346689999976

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=5.6e-33  Score=239.83  Aligned_cols=164  Identities=30%  Similarity=0.521  Sum_probs=143.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|.+.+.||+|+||.||+|+++     ..++.||+|++.....   ...+.+.+|+.+++.++||||+++++++...+.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQR-----LTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYESTTH   80 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccceeeeeccCCCCceEEEEEEC-----CCCCEEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhhcccCCE
Confidence            47999999999999999999976     3567899999976432   223457889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE---cCCCcEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM---DSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl---~~~~~v~l~Dfg~s~~~~  266 (282)
                      .|+||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+   +.++.++|+|||++....
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             EEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            99999999999999999888889999999999999999999999999999999999999   788999999999986432


Q ss_pred             c-----chhheeeccCcccc
Q 023430          267 C-----CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~-----~~~~~~~~ape~~~  281 (282)
                      .     ..|++.|+|||.+.
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~  180 (304)
T 2jam_A          161 NGIMSTACGTPGYVAPEVLA  180 (304)
T ss_dssp             CBTTHHHHSCCCBCCTTTBS
T ss_pred             CCccccccCCCCccChHHhc
Confidence            2     25799999999873

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.1e-34  Score=250.39  Aligned_cols=166  Identities=27%  Similarity=0.405  Sum_probs=140.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh--hhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII--KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ++|++.+.||+|+||.||+|.++     ..+..||+|++......  .....+.+.+|+.+++.++||||+++++++...
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIEN-----QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hheeecceeeecCCeEEEEEEEC-----CCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            36999999999999999999976     45778999999765432  234567788999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHh----------------------------------------cCCCCHHHHHHHHHHHHHH
Q 023430          188 SKLYLILDFINGGHLFFHLYR----------------------------------------QGIFREDQARFYTAEIVSA  227 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~----------------------------------------~~~~~~~~~~~i~~qi~~g  227 (282)
                      +..++||||+++|+|.+++..                                        ...+++..+..++.|++.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            999999999999999988741                                        0113567788999999999


Q ss_pred             HHHHHHCCCEeeccCCCceEEcCCC--cEEEEecCccccc-----------ccchhheeeccCccc
Q 023430          228 VSHLHKCGIVHRDLKPENILMDSDG--HVMAAHSLNSHNQ-----------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       228 L~ylH~~~iiHrDlKp~NILl~~~~--~v~l~Dfg~s~~~-----------~~~~~~~~~~ape~~  280 (282)
                      |.|||++||+||||||+|||++.++  .+||+|||++...           ....|++.|+|||.+
T Consensus       181 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  246 (345)
T 3hko_A          181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL  246 (345)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHH
T ss_pred             HHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhh
Confidence            9999999999999999999998776  8999999999632           223679999999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.6e-33  Score=250.36  Aligned_cols=162  Identities=23%  Similarity=0.404  Sum_probs=135.0

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      |...+.||+|+||.||+|++.     ..+..||+|++.....   ...+.+.+|+.+|+.++||||+++++++...+.++
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~-----~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  162 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEET-----ATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIV  162 (373)
T ss_dssp             EEEEEECC-----CEEEEEET-----TTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             eecceEEecCcCEEEEEEEEc-----CCCcEEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            334678999999999999976     4567899999976532   23456889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE--cCCCcEEEEecCcccccc--
Q 023430          192 LILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM--DSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl--~~~~~v~l~Dfg~s~~~~--  266 (282)
                      +||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+  +.++.+||+|||++....  
T Consensus       163 lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~  242 (373)
T 2x4f_A          163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR  242 (373)
T ss_dssp             EEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence            999999999999888654 458999999999999999999999999999999999999  567899999999996321  


Q ss_pred             ----cchhheeeccCcccc
Q 023430          267 ----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ----~~~~~~~~~ape~~~  281 (282)
                          ...|++.|||||.++
T Consensus       243 ~~~~~~~gt~~y~aPE~~~  261 (373)
T 2x4f_A          243 EKLKVNFGTPEFLAPEVVN  261 (373)
T ss_dssp             CBCCCCCSSCTTCCHHHHT
T ss_pred             cccccccCCCcEeChhhcc
Confidence                225899999999874

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=9e-34  Score=253.95  Aligned_cols=165  Identities=24%  Similarity=0.340  Sum_probs=142.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.++||+|+||.||+|+++     .+++.||||++.....  ....+.+.+|+.+++.++||||+++++++....
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   80 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHK-----KTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT   80 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT
T ss_pred             CCceEEEEEEEcCCCeEEEEEEEC-----CCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC
Confidence            468999999999999999999987     4567899999976542  233456778999999999999999999998755


Q ss_pred             --EEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE----cCCCcEEEEec
Q 023430          189 --KLYLILDFINGGHLFFHLYRQG---IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM----DSDGHVMAAHS  259 (282)
Q Consensus       189 --~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl----~~~~~v~l~Df  259 (282)
                        ..++||||+++|+|.+++....   .+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+||
T Consensus        81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DF  160 (396)
T 4eut_A           81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF  160 (396)
T ss_dssp             TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred             CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecC
Confidence              7899999999999999987543   28999999999999999999999999999999999999    77888999999


Q ss_pred             Ccccccc------cchhheeeccCccc
Q 023430          260 LNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~------~~~~~~~~~ape~~  280 (282)
                      |++....      ...|++.|+|||.+
T Consensus       161 G~a~~~~~~~~~~~~~gt~~y~aPE~~  187 (396)
T 4eut_A          161 GAARELEDDEQFVSLYGTEEYLHPDMY  187 (396)
T ss_dssp             GGCEECCCGGGSSCSSSCCTTCCHHHH
T ss_pred             CCceEccCCCccccccCCccccCHHHh
Confidence            9996422      22579999999976

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-33  Score=250.21  Aligned_cols=164  Identities=20%  Similarity=0.304  Sum_probs=136.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||.||+|.++     .+++.||||++.... ......+.+.+|+.+|+.++||||+++++++....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   97 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDG-----RTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE   97 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEET-----TTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred             cceEEEeEEeeecCCeEEEEEEEC-----CCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCC
Confidence            468999999999999999999976     457789999986543 23344567889999999999999999999997653


Q ss_pred             ------EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 ------KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                            .+|+||||+ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A           98 TLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             STTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             ccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecc
Confidence                  469999999 7899888865 56899999999999999999999999999999999999999999999999999


Q ss_pred             cccc----cchhheeeccCccc
Q 023430          263 HNQL----CCFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~----~~~~~~~~~ape~~  280 (282)
                      +...    ...+++.|+|||.+
T Consensus       176 ~~~~~~~~~~~~t~~y~aPE~~  197 (367)
T 1cm8_A          176 RQADSEMTGYVVTRWYRAPEVI  197 (367)
T ss_dssp             EECCSSCCSSCSCGGGCCTHHH
T ss_pred             cccccccCcCcCCCCcCCHHHH
Confidence            7432    22669999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.8e-33  Score=239.19  Aligned_cols=165  Identities=22%  Similarity=0.332  Sum_probs=145.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|.++     ..+..||+|++.....  ....+.+.+|+.+++.++||||+++++++...+.
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   79 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNI   79 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeecCCCcEEEEEEEC-----CCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCE
Confidence            47999999999999999999976     3567899999875532  2345678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc----
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ----  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~----  265 (282)
                      .|+||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...    
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  159 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             EEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence            9999999999999998877677999999999999999999999999999999999999999999999999998632    


Q ss_pred             -----ccchhheeeccCcccc
Q 023430          266 -----LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 -----~~~~~~~~~~ape~~~  281 (282)
                           ....|++.|+|||.+.
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~  180 (276)
T 2yex_A          160 RERLLNKMCGTLPYVAPELLK  180 (276)
T ss_dssp             EECCBCCCCSCGGGCCGGGGT
T ss_pred             chhcccCCccccCccChHHHh
Confidence                 1225799999999873

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.2e-33  Score=251.02  Aligned_cols=163  Identities=23%  Similarity=0.312  Sum_probs=142.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC--CCCeeeeeEEEEe
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT--HPFIVQLRYSFQT  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~  186 (282)
                      ..+|++.+.||+|+||.||+|.+.      .+..||||++..... .....+.+.+|+.+|+.++  |+||+++++++..
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~------~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~  127 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT  127 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT------TCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             CCceEEEEEEccCCCeEEEEEEcC------CCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec
Confidence            456999999999999999999854      367899999976543 3445567889999999997  5999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+.+|+||| +.+++|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++....
T Consensus       128 ~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          128 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             SSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             CCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            999999999 66889999999888899999999999999999999999999999999999995 6899999999996421


Q ss_pred             ---------cchhheeeccCccc
Q 023430          267 ---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ---------~~~~~~~~~ape~~  280 (282)
                               ...|++.|||||++
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~~  228 (390)
T 2zmd_A          206 PDTTSVVKDSQVGAVNYMPPEAI  228 (390)
T ss_dssp             --------CCSCCCGGGCCHHHH
T ss_pred             CCCccccCCCCCcCCCccChHHh
Confidence                     12589999999986

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=9.7e-34  Score=258.08  Aligned_cols=167  Identities=20%  Similarity=0.283  Sum_probs=143.6

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+.+..++|++.+.||+|+||.||+|.++      .+..||||+++...    ...+.+.+|+.+|+.++||||++++++
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~  251 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYN------KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAV  251 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEET------TTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEEC------CccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEE
Confidence            45666788999999999999999999875      34569999997643    234668899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +. ...+|+||||+.+|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+
T Consensus       252 ~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~  330 (454)
T 1qcf_A          252 VT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL  330 (454)
T ss_dssp             EC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred             Ee-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCC
Confidence            86 56799999999999999999753  3688999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc--------hhheeeccCcccc
Q 023430          262 SHNQLCC--------FFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~~~~--------~~~~~~~ape~~~  281 (282)
                      ++....+        .++..|||||.++
T Consensus       331 a~~~~~~~~~~~~~~~~~~~y~aPE~~~  358 (454)
T 1qcf_A          331 ARVIEDNEYTAREGAKFPIKWTAPEAIN  358 (454)
T ss_dssp             GGGBCCHHHHTTCSSSSCGGGSCHHHHH
T ss_pred             ceEcCCCceeccCCCcccccccCHHHhc
Confidence            9753222        2356899999874

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=4.4e-33  Score=241.03  Aligned_cols=167  Identities=20%  Similarity=0.306  Sum_probs=139.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.+.     ..+..||+|++...........+.+.+|+.+++.++||||+++++++...+
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~  105 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACL-----LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN  105 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEET-----TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             ccceEEEEeecCCCCceEEEEEEc-----CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            357999999999999999999976     356789999997654444555677889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          189 KLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ..++||||+++++|.+++..    ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~  185 (310)
T 2wqm_A          106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF  185 (310)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----
T ss_pred             cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceee
Confidence            99999999999999988864    45689999999999999999999999999999999999999999999999999863


Q ss_pred             cc-------cchhheeeccCccc
Q 023430          265 QL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~-------~~~~~~~~~ape~~  280 (282)
                      ..       ...|++.|+|||.+
T Consensus       186 ~~~~~~~~~~~~~~~~y~aPE~~  208 (310)
T 2wqm_A          186 FSSKTTAAHSLVGTPYYMSPERI  208 (310)
T ss_dssp             -------------CCSSCCHHHH
T ss_pred             ecCCCccccccCCCeeEeChHHh
Confidence            22       12578999999976

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.9e-33  Score=244.96  Aligned_cols=174  Identities=21%  Similarity=0.226  Sum_probs=144.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+...+|++.+.||+|+||.||+|.++... ...+..||+|++....  .......+.+|+.+++.++||||+++++++
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  115 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSS-GKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVI  115 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCC-CCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            4566789999999999999999999877432 1234569999987543  233445688999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ...+..++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       116 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  195 (333)
T 1mqb_A          116 SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR  195 (333)
T ss_dssp             CSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             ecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence            9999999999999999999999764 568999999999999999999999999999999999999999999999999996


Q ss_pred             ccccc----------hhheeeccCcccc
Q 023430          264 NQLCC----------FFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~~----------~~~~~~~ape~~~  281 (282)
                      ....+          .++..|+|||.+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (333)
T 1mqb_A          196 VLEDDPEATYTTSGGKIPIRWTAPEAIS  223 (333)
T ss_dssp             ---------------CCCGGGSCHHHHH
T ss_pred             hhccccccccccCCCCccccccCchhcc
Confidence            43221          2356799999863

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1.4e-33  Score=246.28  Aligned_cols=170  Identities=19%  Similarity=0.206  Sum_probs=137.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||+|++...+. .....||+|.+....  .....+.+.+|+.+++.++||||+++++++..
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   88 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC-----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCc-eEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            445689999999999999999999874322 122346888876432  23344668899999999999999999999987


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .. .++|+||+.+|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            54 78999999999999998774 56899999999999999999999999999999999999999999999999998532


Q ss_pred             c---------cchhheeeccCccc
Q 023430          266 L---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~---------~~~~~~~~~ape~~  280 (282)
                      .         ...++..|||||.+
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~  191 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESI  191 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHH
T ss_pred             cCCcccccccCCCccccccChHHh
Confidence            1         11346789999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.8e-33  Score=242.18  Aligned_cols=167  Identities=24%  Similarity=0.300  Sum_probs=136.3

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh--hhhHHHHHHHHHHHHHhcC---CCCeeeeeE
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII--KKNHVDYMKAERDILTKVT---HPFIVQLRY  182 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~---h~nIv~l~~  182 (282)
                      ..++|++.+.||+|+||.||+|+++     .+++.||+|++......  .......+.+|+.+++.++   ||||+++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~   81 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDP-----HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMD   81 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECT-----TTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeee
Confidence            3568999999999999999999966     45778999998753311  1111234556777776664   999999999


Q ss_pred             EEEeCC-----EEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEE
Q 023430          183 SFQTRS-----KLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       183 ~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~  255 (282)
                      ++....     .+++||||+. ++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~k  160 (308)
T 3g33_A           82 VCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVK  160 (308)
T ss_dssp             EEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEE
T ss_pred             eeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEE
Confidence            998765     5899999997 599999887644  89999999999999999999999999999999999999999999


Q ss_pred             EEecCccccc------ccchhheeeccCccc
Q 023430          256 AAHSLNSHNQ------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       256 l~Dfg~s~~~------~~~~~~~~~~ape~~  280 (282)
                      |+|||++...      ....|++.|||||.+
T Consensus       161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  191 (308)
T 3g33_A          161 LADFGLARIYSYQMALTPVVVTLWYRAPEVL  191 (308)
T ss_dssp             ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHH
T ss_pred             EeeCccccccCCCcccCCccccccccCchHH
Confidence            9999999632      122679999999986

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=5.3e-33  Score=241.12  Aligned_cols=168  Identities=23%  Similarity=0.350  Sum_probs=142.2

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+++++     ..++.||+|++....   ....+.+.+|+.+++.++||||+++++++.
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   96 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGL-----HDGHFYALKRILCHE---QQDREEAQREADMHRLFNHPNILRLVAYCL   96 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEET-----TTCCEEEEEEEEESS---HHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEec-----CCCcEEEEEEEecCC---HHHHHHHHHHHHHHhhcCCCCeeeEEEEEE
Confidence            345678999999999999999999976     456789999886532   344566889999999999999999999986


Q ss_pred             e----CCEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEE
Q 023430          186 T----RSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       186 ~----~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~  257 (282)
                      .    ....|+||||+.+++|.+++..    ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+
T Consensus        97 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~  176 (317)
T 2buj_A           97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLM  176 (317)
T ss_dssp             EEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             eccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEE
Confidence            3    3478999999999999998875    3568999999999999999999999999999999999999999999999


Q ss_pred             ecCcccccc----------------cchhheeeccCcccc
Q 023430          258 HSLNSHNQL----------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       258 Dfg~s~~~~----------------~~~~~~~~~ape~~~  281 (282)
                      |||++....                ...|++.|+|||.+.
T Consensus       177 dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  216 (317)
T 2buj_A          177 DLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS  216 (317)
T ss_dssp             CCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSS
T ss_pred             ecCcchhcccccccccccccccccccccCCcccCCHhHhc
Confidence            999875421                114589999999873

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=4.8e-33  Score=238.10  Aligned_cols=168  Identities=19%  Similarity=0.295  Sum_probs=143.1

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhH----HHHHHHHHHHHHhcCCCCeeeee
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH----VDYMKAERDILTKVTHPFIVQLR  181 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~----~~~~~~E~~~l~~l~h~nIv~l~  181 (282)
                      .+..++|++.+.||+|+||.||+|++.     ..++.||+|++..........    .+.+.+|+.+++.++||||++++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   89 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLV-----KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY   89 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEET-----TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             hhhhccceehhccccCCceeEEEEEEc-----CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhh
Confidence            355679999999999999999999986     456789999986544322211    25688999999999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcCCCc-----
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDSDGH-----  253 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~~~~-----  253 (282)
                      +++....  ++||||+++++|.+++... ..+++..+..++.|++.||.|||++|  |+||||||+|||++.++.     
T Consensus        90 ~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~  167 (287)
T 4f0f_A           90 GLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVC  167 (287)
T ss_dssp             EEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred             eeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCcee
Confidence            9987665  7999999999998888654 46899999999999999999999999  999999999999998887     


Q ss_pred             EEEEecCcccccccc----hhheeeccCccc
Q 023430          254 VMAAHSLNSHNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       254 v~l~Dfg~s~~~~~~----~~~~~~~ape~~  280 (282)
                      +||+|||++......    .|++.|+|||.+
T Consensus       168 ~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~  198 (287)
T 4f0f_A          168 AKVADFGLSQQSVHSVSGLLGNFQWMAPETI  198 (287)
T ss_dssp             EEECCCTTCBCCSSCEECCCCCCTTSCGGGS
T ss_pred             EEeCCCCccccccccccccCCCccccCchhh
Confidence            999999999743332    679999999987

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.3e-33  Score=245.77  Aligned_cols=165  Identities=26%  Similarity=0.442  Sum_probs=138.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh-----hhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII-----KKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ++|++.+.||+|+||.||+|.++     .+++.||||++......     .......+.+|+.+++.++||||+++++++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   84 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFER-----KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF   84 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hceeEeeEEecCCCEEEEEEEEc-----CCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence            46999999999999999999976     45678999998764321     112234577899999999999999999998


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc---EEEEecCc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH---VMAAHSLN  261 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~---v~l~Dfg~  261 (282)
                      .... .|+||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.   +||+|||+
T Consensus        85 ~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           85 DAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             ESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             cCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence            7655 8999999999999999988788999999999999999999999999999999999999987665   99999999


Q ss_pred             cccccc------chhheeeccCccc
Q 023430          262 SHNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~------~~~~~~~~ape~~  280 (282)
                      +.....      ..|++.|+|||.+
T Consensus       164 ~~~~~~~~~~~~~~gt~~y~aPE~~  188 (322)
T 2ycf_A          164 SKILGETSLMRTLCGTPTYLAPEVL  188 (322)
T ss_dssp             CEECCCCHHHHHHHSCCTTCCHHHH
T ss_pred             ceecccccccccccCCcCccCchhh
Confidence            964322      2579999999985

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=6.6e-34  Score=265.37  Aligned_cols=157  Identities=15%  Similarity=0.068  Sum_probs=125.3

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-------hhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeC
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-------IKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTR  187 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~  187 (282)
                      ...+.|++|.+..++..     ..+..|++|++.+...       ......+.+.+|+++|+++ .|+||++++++++++
T Consensus       240 ~~~~~~~~~~h~~~rr~-----~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~  314 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRY-----FFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA  314 (569)
T ss_dssp             CC-C--------CCEEE-----EECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS
T ss_pred             hccccCCcccccccccc-----cccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC
Confidence            34667777766665544     2456799999976431       1234456799999999999 599999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      +.+||||||++|++|.+++.+.+.+++.   .|+.||+.||+|+|++|||||||||+||||+.+|.|||+|||+|+....
T Consensus       315 ~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          315 QSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             SEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             CEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            9999999999999999999988888765   4789999999999999999999999999999999999999999974322


Q ss_pred             -------chhheeeccCccc
Q 023430          268 -------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -------~~~~~~~~ape~~  280 (282)
                             ..||+.|||||.+
T Consensus       392 ~~~~~~t~vGTp~YmAPE~l  411 (569)
T 4azs_A          392 DCSWPTNLVQSFFVFVNELF  411 (569)
T ss_dssp             --CCSHHHHHHHHHHHHHHC
T ss_pred             CCccccCceechhhccHHHh
Confidence                   2789999999987

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.2e-33  Score=241.77  Aligned_cols=168  Identities=23%  Similarity=0.274  Sum_probs=146.4

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+.+..++|++.+.||+|+||.||+|.++     ..+..||+|++....    ...+.+.+|+.+++.++||||++++++
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~   77 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGV   77 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEG-----GGTEEEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccccccceeEEeecCCCCceeEEEeEec-----CCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34556778999999999999999999987     356789999987543    344668899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +...+..|+||||+++++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+
T Consensus        78 ~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~  157 (288)
T 3kfa_A           78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL  157 (288)
T ss_dssp             ECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred             EccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCcc
Confidence            99999999999999999999999864  3489999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc--------hhheeeccCccc
Q 023430          262 SHNQLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~~--------~~~~~~~ape~~  280 (282)
                      +.....+        .+++.|+|||.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~  184 (288)
T 3kfa_A          158 SRLMTGDTYTAHAGAKFPIKWTAPESL  184 (288)
T ss_dssp             GGTSCSSSSEEETTEEECGGGCCHHHH
T ss_pred             ceeccCCccccccCCccccCcCChhhh
Confidence            8642221        346679999976

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=4.2e-33  Score=243.11  Aligned_cols=170  Identities=21%  Similarity=0.296  Sum_probs=145.0

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE-
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ-  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-  185 (282)
                      +..++|++.+.||+|+||.||+|++.... ...+..||||++....   ....+.+.+|+.+++.++|+||+++++++. 
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   95 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLG-DNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYG   95 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTS-SSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCC-CCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhcCCCceeEEEEEEec
Confidence            45578999999999999999999865432 2467889999987643   334466889999999999999999999886 


Q ss_pred             -eCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 -TRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 -~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                       ....+++||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A           96 PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK  175 (327)
T ss_dssp             SSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred             CCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccce
Confidence             45679999999999999999976 3569999999999999999999999999999999999999999999999999996


Q ss_pred             ccc----------cchhheeeccCccc
Q 023430          264 NQL----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~----------~~~~~~~~~ape~~  280 (282)
                      ...          ...++..|+|||.+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~  202 (327)
T 3lxl_A          176 LLPLDKDYYVVREPGQSPIFWYAPESL  202 (327)
T ss_dssp             ECCTTCSEEECSSCCCSCGGGSCHHHH
T ss_pred             ecccCCccceeeccCCccccccCHHHh
Confidence            321          11457779999976

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=4.8e-33  Score=238.82  Aligned_cols=170  Identities=15%  Similarity=0.180  Sum_probs=143.2

Q ss_pred             CcCCCCeEEEe-eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFR-VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      .+...+|++.+ .||+|+||.||+|.+...   ..+..||||++..... .....+.+.+|+.+++.++||||+++++++
T Consensus        12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   87 (291)
T 1xbb_A           12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMK---KVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC   87 (291)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECS---SSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eecchhhhhccCccccccCeeeEeeeecCC---CceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            44556899998 999999999999976522   3567899999976532 334456788999999999999999999998


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                       ..+..++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus        88 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A           88 -EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             -ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             -CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence             5667899999999999999998888899999999999999999999999999999999999999999999999999863


Q ss_pred             ccc----------chhheeeccCccc
Q 023430          265 QLC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~----------~~~~~~~~ape~~  280 (282)
                      ...          ..+++.|+|||.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~y~aPE~~  192 (291)
T 1xbb_A          167 LRADENYYKAQTHGKWPVKWYAPECI  192 (291)
T ss_dssp             CCTTCSEEEC----CCCGGGCCHHHH
T ss_pred             eccCCCcccccccCCCCceeeChHHh
Confidence            221          1335789999976

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.5e-33  Score=238.83  Aligned_cols=169  Identities=13%  Similarity=0.188  Sum_probs=146.2

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.+.||+|+||.||+|++.       +..||+|++..... .....+.+.+|+.+++.++||||+++++++
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   76 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRWQ-------GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFSHPNVLPVLGAC   76 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEET-------TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCCSCTTEECEEEEE
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEEC-------CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCchhheEEEE
Confidence            3456678999999999999999999864       45699999976542 234456688999999999999999999999


Q ss_pred             EeC--CEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcCCCcEEEEe
Q 023430          185 QTR--SKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       185 ~~~--~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                      ...  ...++||||+++|+|.+++....  .+++..+..++.|++.||.|||+++  |+||||||+|||++.++.++++|
T Consensus        77 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~  156 (271)
T 3kmu_A           77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISM  156 (271)
T ss_dssp             CTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred             ccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEe
Confidence            877  78899999999999999998765  4899999999999999999999999  99999999999999999999997


Q ss_pred             cCccc--ccccchhheeeccCcccc
Q 023430          259 SLNSH--NQLCCFFFFLFLGGGVFN  281 (282)
Q Consensus       259 fg~s~--~~~~~~~~~~~~ape~~~  281 (282)
                      ||++.  ......|++.|||||.+.
T Consensus       157 ~~~~~~~~~~~~~~t~~y~aPE~~~  181 (271)
T 3kmu_A          157 ADVKFSFQSPGRMYAPAWVAPEALQ  181 (271)
T ss_dssp             GGSCCTTSCTTCBSCGGGSCHHHHH
T ss_pred             ccceeeecccCccCCccccChhhhc
Confidence            76654  344457899999999863

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.3e-33  Score=235.72  Aligned_cols=166  Identities=22%  Similarity=0.320  Sum_probs=144.8

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      +.+..++|++.+.||+|+||.||+|.+.      .+..||+|++.....    ..+.+.+|+.+++.++||||+++++++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~   72 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWL------NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVC   72 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEET------TTEEEEEEEECTTTB----CHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEec------CCCeEEEEEccccCC----CHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            4456678999999999999999999875      345799999976542    224588899999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ...+..++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.
T Consensus        73 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~  152 (267)
T 3t9t_A           73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR  152 (267)
T ss_dssp             CSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGG
T ss_pred             ccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccc
Confidence            9999999999999999999999765 458999999999999999999999999999999999999999999999999986


Q ss_pred             cccc--------chhheeeccCccc
Q 023430          264 NQLC--------CFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~~--------~~~~~~~~ape~~  280 (282)
                      ....        ..++..|+|||.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~y~aPE~~  177 (267)
T 3t9t_A          153 FVLDDQYTSSTGTKFPVKWASPEVF  177 (267)
T ss_dssp             GBCCHHHHSTTSTTCCGGGCCHHHH
T ss_pred             ccccccccccccccccccccChhhh
Confidence            4322        2446789999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=5.3e-33  Score=239.20  Aligned_cols=160  Identities=23%  Similarity=0.283  Sum_probs=134.5

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh--cCCCCeeeeeEEEE
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK--VTHPFIVQLRYSFQ  185 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~  185 (282)
                      ..++|++.+.||+|+||.||+|++.       +..||||++....      .+.+.+|.+++..  ++||||+++++++.
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~   72 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSWQ-------GENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDM   72 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEET-------TEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEEC-------CEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeec
Confidence            4568999999999999999999863       5679999986542      2334556777666  78999999999865


Q ss_pred             e----CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCEeeccCCCceEEcCCCc
Q 023430          186 T----RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH--------KCGIVHRDLKPENILMDSDGH  253 (282)
Q Consensus       186 ~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH--------~~~iiHrDlKp~NILl~~~~~  253 (282)
                      .    ...+|+||||+++|+|.+++. ...+++..+..++.|++.||.|||        +++|+||||||+|||++.++.
T Consensus        73 ~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~  151 (301)
T 3q4u_A           73 TSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ  151 (301)
T ss_dssp             EEETTEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSC
T ss_pred             cccCCCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCC
Confidence            4    246899999999999999994 456899999999999999999999        999999999999999999999


Q ss_pred             EEEEecCccccccc-----------chhheeeccCcccc
Q 023430          254 VMAAHSLNSHNQLC-----------CFFFFLFLGGGVFN  281 (282)
Q Consensus       254 v~l~Dfg~s~~~~~-----------~~~~~~~~ape~~~  281 (282)
                      +||+|||++.....           ..|++.|+|||.+.
T Consensus       152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  190 (301)
T 3q4u_A          152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD  190 (301)
T ss_dssp             EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHT
T ss_pred             EEEeeCCCeeecccccccccccccccccccceeChhhhc
Confidence            99999999852111           16799999999863

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.1e-32  Score=239.63  Aligned_cols=166  Identities=23%  Similarity=0.291  Sum_probs=141.6

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--CC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--RS  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~  188 (282)
                      .|++++.||+|+||.||++.++.... ..++.||||++....  .....+.+.+|+.+++.++||||+++++++..  ..
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTND-GTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA  108 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC---CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCC-CCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence            35999999999999999998764432 467889999997653  23445678899999999999999999999987  46


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .+++||||+++++|.+++... .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....  
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          109 SLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             EEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             eEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            899999999999999998654 48999999999999999999999999999999999999999999999999996321  


Q ss_pred             --------cchhheeeccCccc
Q 023430          267 --------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 --------~~~~~~~~~ape~~  280 (282)
                              ...++..|+|||.+
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE~~  209 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPECL  209 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHHHH
T ss_pred             ccccccccCCCCCceeeChHHh
Confidence                    11457779999986

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.7e-33  Score=245.59  Aligned_cols=171  Identities=18%  Similarity=0.219  Sum_probs=139.3

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|++...+. .....||+|.+....  .....+.+.+|+.+++.++||||+++++++.
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   85 (325)
T 3kex_A            9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGE-SIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP   85 (325)
T ss_dssp             BCCTTTEEEEEEEECCSSCEEEEEEECCTTC-SCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hcCHhHceeeeeeeecCCceEEEEEEcCCCc-eEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence            3456789999999999999999999874322 122347888775432  1222234667999999999999999999886


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                       ....++||||+.+|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        86 -~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           86 -GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             -BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             -CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence             45699999999999999998764 4689999999999999999999999999999999999999999999999999964


Q ss_pred             ccc---------chhheeeccCccc
Q 023430          265 QLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~---------~~~~~~~~ape~~  280 (282)
                      ...         ..++..|||||.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~  189 (325)
T 3kex_A          165 LPPDDKQLLYSEAKTPIKWMALESI  189 (325)
T ss_dssp             SCCCTTCCC-----CCTTTSCHHHH
T ss_pred             cCcccccccccCCCCcccccChHHh
Confidence            211         1346689999986

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1e-33  Score=246.95  Aligned_cols=163  Identities=20%  Similarity=0.320  Sum_probs=136.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++++.||+|+||.||+|+++     .++..||+|++......  .....+.+|+.+++.++||||+++++++...+.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSK-----LTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS   74 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC
T ss_pred             CceEEEEEEcCCCCEEEEEEEEC-----CCCcEEEEEEEeccccc--ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE
Confidence            58999999999999999999977     45678999998654321  111124469999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .++||||+++ +|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....  
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           75 LTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             EEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             EEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence            9999999985 888888764 458999999999999999999999999999999999999999999999999986322  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...|++.|+|||.+
T Consensus       154 ~~~~~~~~~t~~y~aPE~~  172 (324)
T 3mtl_A          154 TKTYDNEVVTLWYRPPDIL  172 (324)
T ss_dssp             ---------CGGGCCHHHH
T ss_pred             ccccccccCcccccChhhh
Confidence                 12569999999976

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=3.1e-33  Score=243.90  Aligned_cols=167  Identities=23%  Similarity=0.327  Sum_probs=140.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCc--EEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG--IYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      +..++|++.+.||+|+||.||+|+++.     .+.  .+|+|.+....  .....+.+.+|+.+++.+ +||||++++++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~   94 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKK-----DGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGA   94 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEE-----TTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEE
T ss_pred             ccHHHccceeeeecCCCceEEEEEEcc-----CCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhcee
Confidence            445789999999999999999999773     333  35899886532  233445688899999999 89999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceE
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQG----------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL  247 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NIL  247 (282)
                      +...+..|+||||+++++|.+++....                .+++..++.++.|++.||.|||++||+||||||+|||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl  174 (327)
T 1fvr_A           95 CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL  174 (327)
T ss_dssp             EEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             eeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEE
Confidence            999999999999999999999997654                6899999999999999999999999999999999999


Q ss_pred             EcCCCcEEEEecCcccccc------cchhheeeccCccc
Q 023430          248 MDSDGHVMAAHSLNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       248 l~~~~~v~l~Dfg~s~~~~------~~~~~~~~~ape~~  280 (282)
                      ++.++.+||+|||++....      ...+++.|+|||.+
T Consensus       175 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  213 (327)
T 1fvr_A          175 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESL  213 (327)
T ss_dssp             ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHH
T ss_pred             EcCCCeEEEcccCcCccccccccccCCCCCccccChhhh
Confidence            9999999999999986322      22457789999976

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=6e-33  Score=235.49  Aligned_cols=166  Identities=23%  Similarity=0.335  Sum_probs=134.3

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-hhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-KNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      +..++|++.+.||+|+||.||+|.+.       +..||+|++....... ....+.+.+|+.+++.++||||+++++++.
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFWI-------GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL   76 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEET-------TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cchhheeeeeeeccCCCeEEEEEEEc-------CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            45679999999999999999999864       4579999987643222 233466889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CEeeccCCCceEEcC--------CCcE
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG---IVHRDLKPENILMDS--------DGHV  254 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~NILl~~--------~~~v  254 (282)
                      ..+..++||||+++++|.+++. .+.+++..+..++.|++.||.|||++|   |+||||||+|||++.        ++.+
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~  155 (271)
T 3dtc_A           77 KEPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKIL  155 (271)
T ss_dssp             CC--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred             cCCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcce
Confidence            9999999999999999988874 557899999999999999999999999   999999999999986        7789


Q ss_pred             EEEecCccccc-----ccchhheeeccCccc
Q 023430          255 MAAHSLNSHNQ-----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       255 ~l~Dfg~s~~~-----~~~~~~~~~~ape~~  280 (282)
                      +|+|||++...     ....|++.|+|||.+
T Consensus       156 kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~  186 (271)
T 3dtc_A          156 KITDFGLAREWHRTTKMSAAGAYAWMAPEVI  186 (271)
T ss_dssp             EECCCCC-------------CCGGGSCHHHH
T ss_pred             EEccCCcccccccccccCCCCccceeCHHHh
Confidence            99999999632     223679999999976

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=6e-33  Score=237.59  Aligned_cols=168  Identities=21%  Similarity=0.278  Sum_probs=134.7

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|+++     ..++.||+|++..... .....+.+.++...++.++||||+++++++.
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~   76 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHV-----PSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALF   76 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEec-----CCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCCCCeEEEEeeeee
Confidence            345678999999999999999999976     4577899999976532 2233344555666688899999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEEEEecC
Q 023430          186 TRSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      ..+..++||||+++ +|.+++..    ...+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||
T Consensus        77 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T 3fme_A           77 REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG  155 (290)
T ss_dssp             CSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred             ccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecC
Confidence            99999999999985 77666543    46799999999999999999999998 99999999999999999999999999


Q ss_pred             ccccccc------chhheeeccCccc
Q 023430          261 NSHNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~------~~~~~~~~ape~~  280 (282)
                      ++.....      ..|++.|+|||.+
T Consensus       156 ~~~~~~~~~~~~~~~~t~~y~aPE~~  181 (290)
T 3fme_A          156 ISGYLVDDVAKDIDAGCKPYMAPERI  181 (290)
T ss_dssp             --------------CCCCCCSCHHHH
T ss_pred             CcccccccccccccCCCccccChhhc
Confidence            9863221      2679999999986

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.2e-32  Score=244.59  Aligned_cols=164  Identities=20%  Similarity=0.299  Sum_probs=135.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|.+.     ..++.||||++.... ......+.+.+|+.+++.++||||+++++++....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   97 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDA-----ILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK   97 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEEC-----CCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeecccc
Confidence            468999999999999999999876     456789999997643 23344566888999999999999999999997654


Q ss_pred             ------EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 ------KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                            ..|+||||+.+ +|.+.+.  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        98 ~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A           98 SLEEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             STTTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             ccccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecc
Confidence                  78999999975 6777774  45899999999999999999999999999999999999999999999999999


Q ss_pred             cccc------cchhheeeccCcccc
Q 023430          263 HNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~------~~~~~~~~~ape~~~  281 (282)
                      ....      ...|++.|||||.+.
T Consensus       175 ~~~~~~~~~~~~~gt~~y~aPE~~~  199 (371)
T 2xrw_A          175 RTAGTSFMMTPYVVTRYYRAPEVIL  199 (371)
T ss_dssp             ---------------CTTCCHHHHT
T ss_pred             cccccccccCCceecCCccCHHHhc
Confidence            6432      226799999999863

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1e-33  Score=246.34  Aligned_cols=164  Identities=23%  Similarity=0.310  Sum_probs=142.8

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+|+++      .+..||+|++....   ....+.+.+|+.+++.++||||+++++++...
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLR------DGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECT------TCCEEEEEECCSCC---SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             HHhccCccceeecCCCeeEEEEEEC------CCCEEEEEEecccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            3568999999999999999999853      36689999886542   23456788999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +..++||||+++|+|.+++....    .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence            99999999999999998886542    48899999999999999999999999999999999999999999999999986


Q ss_pred             ccc---------cchhheeeccCccc
Q 023430          264 NQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~---------~~~~~~~~~ape~~  280 (282)
                      ...         ...|++.|+|||.+
T Consensus       188 ~~~~~~~~~~~~~~~gt~~y~aPE~~  213 (321)
T 2qkw_B          188 KGTELDQTHLSTVVKGTLGYIDPEYF  213 (321)
T ss_dssp             ECSSSSCCCCBCCCEEETTTCCHHHH
T ss_pred             ccccccccccccccCCCccccCHHHh
Confidence            321         11479999999976

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.3e-33  Score=246.11  Aligned_cols=165  Identities=21%  Similarity=0.290  Sum_probs=138.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--  186 (282)
                      .++|++++.||+|+||.||+|+++     .+++.||+|++...... ......+.+|+.+++.++||||+++++++..  
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   89 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHR-----KTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKA   89 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEET-----TTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-
T ss_pred             ccceeEEEEEecCCCcEEEEEEEC-----CCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhccCCCcccHhheeeccc
Confidence            368999999999999999999986     45678999998665422 2223456789999999999999999999887  


Q ss_pred             ------CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          187 ------RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       187 ------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                            .+.+|+||||+++ +|...+... ..+++.+++.++.|++.||.|||++||+||||||+|||++.++.+||+||
T Consensus        90 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Df  168 (351)
T 3mi9_A           90 SPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADF  168 (351)
T ss_dssp             -------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             cccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccc
Confidence                  4468999999986 666666543 56999999999999999999999999999999999999999999999999


Q ss_pred             Cccccc-----------ccchhheeeccCccc
Q 023430          260 LNSHNQ-----------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~-----------~~~~~~~~~~ape~~  280 (282)
                      |++...           ....|++.|||||.+
T Consensus       169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  200 (351)
T 3mi9_A          169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELL  200 (351)
T ss_dssp             TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHH
T ss_pred             hhcccccccccccccccCCcccccCccCchhh
Confidence            998531           112569999999976

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=7.6e-33  Score=236.28  Aligned_cols=170  Identities=22%  Similarity=0.269  Sum_probs=143.2

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|++....  ..+..||+|++....  .....+.+.+|+.+++.++||||+++++++.
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   83 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE   83 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTT--CCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCC--CCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEc
Confidence            445678999999999999999999876422  345569999987653  2334567889999999999999999999986


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      . +..|+||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus        84 ~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           84 E-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             C-CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence            5 4578999999999999999765 4589999999999999999999999999999999999999999999999999864


Q ss_pred             ccc--------chhheeeccCccc
Q 023430          265 QLC--------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~--------~~~~~~~~ape~~  280 (282)
                      ...        ..+++.|+|||.+
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~  186 (281)
T 3cc6_A          163 IEDEDYYKASVTRLPIKWMSPESI  186 (281)
T ss_dssp             C---------CCCCCGGGCCHHHH
T ss_pred             cccccccccccCCCCcceeCchhh
Confidence            221        2446789999976

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=3.8e-33  Score=243.40  Aligned_cols=172  Identities=17%  Similarity=0.238  Sum_probs=139.5

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||+|++.+......+..||||++....  .......+.+|+.+++.++||||+++++++..
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  104 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  104 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence            4456899999999999999999996654344567789999986432  23344568889999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEE
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQG-------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMA  256 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l  256 (282)
                      ....|+||||+++++|.+++....       .+++..+..++.|++.||.|||++||+||||||+|||++.+   +.++|
T Consensus       105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEE
Confidence            999999999999999999998653       48899999999999999999999999999999999999954   45999


Q ss_pred             EecCcccc---------cccchhheeeccCccc
Q 023430          257 AHSLNSHN---------QLCCFFFFLFLGGGVF  280 (282)
Q Consensus       257 ~Dfg~s~~---------~~~~~~~~~~~ape~~  280 (282)
                      +|||++..         ..+..+++.|+|||.+
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  217 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF  217 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHH
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHh
Confidence            99998852         1223568899999976

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-32  Score=240.58  Aligned_cols=170  Identities=19%  Similarity=0.211  Sum_probs=138.5

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.++||+|+||.||+|.+...+. .....||+|.+....  .....+.+.+|+.+++.++||||+++++++..
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   88 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTC-SCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCc-eEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence            456789999999999999999999875432 122336777775432  23345668899999999999999999999987


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .. .++|+||+.+|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             CC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            65 88999999999999998764 56899999999999999999999999999999999999999999999999999632


Q ss_pred             cc---------chhheeeccCccc
Q 023430          266 LC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~---------~~~~~~~~ape~~  280 (282)
                      ..         ..+++.|||||.+
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~  191 (327)
T 3lzb_A          168 GAEEKEYHAEGGKVPIKWMALESI  191 (327)
T ss_dssp             ------------CCCGGGSCHHHH
T ss_pred             cCccccccccCCCccccccCHHHH
Confidence            11         1346689999976

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=5.2e-33  Score=238.44  Aligned_cols=170  Identities=22%  Similarity=0.311  Sum_probs=137.8

Q ss_pred             hhhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeee
Q 023430          102 ESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLR  181 (282)
Q Consensus       102 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~  181 (282)
                      .....+..++|++.+.||+|+||.||+|++.        ..+|+|+++.... .....+.+.+|+.+++.++|+||++++
T Consensus        16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--------~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~   86 (289)
T 3og7_A           16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWH--------GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFM   86 (289)
T ss_dssp             --CCBCCTTSCEEEEEEEECSSEEEEEEESS--------SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             CCCCccCccceeeeeEecCCCCeEEEEEEEc--------CceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            3445677889999999999999999999854        2499999875532 344556788999999999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      ++. .....++||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||
T Consensus        87 ~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg  165 (289)
T 3og7_A           87 GYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG  165 (289)
T ss_dssp             EEE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred             eec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccce
Confidence            955 55678999999999999998854 3458999999999999999999999999999999999999999999999999


Q ss_pred             cccccc---------cchhheeeccCcccc
Q 023430          261 NSHNQL---------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       261 ~s~~~~---------~~~~~~~~~ape~~~  281 (282)
                      ++....         ...|++.|+|||.+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (289)
T 3og7_A          166 LATEKSRWSGSHQFEQLSGSILWMAPEVIR  195 (289)
T ss_dssp             ------------------CCCTTCCHHHHC
T ss_pred             eccccccccccccccccCCCccccCchhhc
Confidence            986322         125799999999863

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=5.6e-33  Score=239.27  Aligned_cols=164  Identities=27%  Similarity=0.438  Sum_probs=140.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+++     ..+..||+|++....   ....+.+.+|+.+++.++||||+++++++...+
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNK-----ETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYYHDG   89 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEET-----TTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-
T ss_pred             ccceeecceeccCCCeEEEEEEEc-----CCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC
Confidence            357999999999999999999987     356789999986543   234566888999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ--  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~--  265 (282)
                      ..++||||+++++|..++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...  
T Consensus        90 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK  169 (302)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred             eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence            99999999999999988865 456999999999999999999999999999999999999999999999999987532  


Q ss_pred             -----ccchhheeeccCccc
Q 023430          266 -----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 -----~~~~~~~~~~ape~~  280 (282)
                           ....|++.|+|||.+
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~  189 (302)
T 2j7t_A          170 TLQKRDSFIGTPYWMAPEVV  189 (302)
T ss_dssp             HHHC-----CCGGGCCHHHH
T ss_pred             cccccccccCChhhcCCeee
Confidence                 222679999999976

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.6e-32  Score=236.71  Aligned_cols=164  Identities=22%  Similarity=0.399  Sum_probs=144.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      +.|++.+.||+|+||.||+|.+.     ..++.||+|++.....  ....+.+.+|+.+++.++||||+++++++.....
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   94 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDN-----RTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK   94 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             HHHHHhhhhcccCCeEEEEEEEC-----CCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe
Confidence            46999999999999999999876     4567899999976542  3345678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---  266 (282)
                      .|+||||+++++|.+++.. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....   
T Consensus        95 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             EEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred             EEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence            9999999999999998854 568999999999999999999999999999999999999999999999999985321   


Q ss_pred             ----cchhheeeccCcccc
Q 023430          267 ----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ----~~~~~~~~~ape~~~  281 (282)
                          ...|++.|+|||.+.
T Consensus       174 ~~~~~~~~~~~y~aPE~~~  192 (303)
T 3a7i_A          174 IKRNTFVGTPFWMAPEVIK  192 (303)
T ss_dssp             CCBCCCCSCGGGCCHHHHT
T ss_pred             cccCccCCCcCccCHHHHh
Confidence                225789999999863

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.1e-32  Score=237.04  Aligned_cols=163  Identities=26%  Similarity=0.448  Sum_probs=138.4

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe---
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT---  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---  186 (282)
                      ++|++.+.||+|+||.||+|++.     ..++.||||++...    ....+.+.+|+.+++.++||||+++++++..   
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   76 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNA-----LDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRN   76 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCC
T ss_pred             ccchhhheeccCCcEEEEEEEEc-----CCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcc
Confidence            46999999999999999999976     45678999998653    2344668899999999999999999998865   


Q ss_pred             ----------CCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEE
Q 023430          187 ----------RSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       187 ----------~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~  255 (282)
                                ....|+||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.++.++
T Consensus        77 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~k  156 (303)
T 1zy4_A           77 FVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVK  156 (303)
T ss_dssp             CCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred             hhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEE
Confidence                      357899999999999999997644 478899999999999999999999999999999999999999999


Q ss_pred             EEecCcccccc---------------------cchhheeeccCcccc
Q 023430          256 AAHSLNSHNQL---------------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       256 l~Dfg~s~~~~---------------------~~~~~~~~~ape~~~  281 (282)
                      |+|||++....                     ...|++.|+|||.+.
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  203 (303)
T 1zy4_A          157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD  203 (303)
T ss_dssp             ECCCCCCSCTTC-------------------------CTTSCHHHHT
T ss_pred             EeeCcchhhcccccchhccccccccccccccccCCCcccccCccccc
Confidence            99999986421                     225789999999863

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=7.7e-33  Score=261.46  Aligned_cols=166  Identities=16%  Similarity=0.204  Sum_probs=139.6

Q ss_pred             CeEEE-eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          111 DFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       111 ~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      .+.+. +.||+|+||.||+|.+...   ..++.||||+++... ......+.+.+|+.+|+.++|||||++++++.. +.
T Consensus       369 ~~~l~~~~LG~G~fG~Vy~~~~~~~---~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~  443 (635)
T 4fl3_A          369 LLTLEDKELGSGNFGTVKKGYYQMK---KVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ES  443 (635)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECS---SCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS
T ss_pred             hccccCCEeccCCCEEEEEEEEcCC---CcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CC
Confidence            44443 4799999999999976532   356789999997654 233445678999999999999999999999864 56


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc-
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC-  268 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~-  268 (282)
                      +++||||+++|+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||++.++.+||+|||+++....+ 
T Consensus       444 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred             EEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence            8999999999999999988888999999999999999999999999999999999999999999999999998632211 


Q ss_pred             ---------hhheeeccCcccc
Q 023430          269 ---------FFFFLFLGGGVFN  281 (282)
Q Consensus       269 ---------~~~~~~~ape~~~  281 (282)
                               .+++.|||||+++
T Consensus       524 ~~~~~~~~~~~t~~y~APE~~~  545 (635)
T 4fl3_A          524 NYYKAQTHGKWPVKWYAPECIN  545 (635)
T ss_dssp             -----------CGGGSCHHHHH
T ss_pred             cccccccCCCCceeeeChhhhc
Confidence                     3457899999863

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.4e-32  Score=236.73  Aligned_cols=165  Identities=19%  Similarity=0.356  Sum_probs=139.0

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ...++|++.+.||+|+||.||+|.++     .++..||+|++....     ..+.+.+|+.+++.++||||+++++++..
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   95 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHK-----ETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFK   95 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEET-----TTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEEC-----CCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEe
Confidence            34568999999999999999999976     456789999987542     23457889999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLY-RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .+..|+||||+++++|.+++. ....+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        96 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  175 (314)
T 3com_A           96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL  175 (314)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence            999999999999999999986 3567999999999999999999999999999999999999999999999999998532


Q ss_pred             c-------cchhheeeccCcccc
Q 023430          266 L-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~-------~~~~~~~~~ape~~~  281 (282)
                      .       ...|++.|+|||.+.
T Consensus       176 ~~~~~~~~~~~~~~~y~aPE~~~  198 (314)
T 3com_A          176 TDTMAKRNTVIGTPFWMAPEVIQ  198 (314)
T ss_dssp             BTTBSCBCCCCSCGGGCCHHHHS
T ss_pred             hhhccccCccCCCCCccChhhcC
Confidence            2       226799999999863

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=4.1e-33  Score=247.44  Aligned_cols=166  Identities=14%  Similarity=0.199  Sum_probs=125.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc--CCCCeeeee------
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV--THPFIVQLR------  181 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~------  181 (282)
                      .+|++.+.||+|+||.||+|+++     .+++.||||++...........+.+.+|+.+++.+  +||||++++      
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p  136 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDV-----ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP  136 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEEC-----CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEee
Confidence            45999999999999999999987     45678999999886554555566788886555444  699988754      


Q ss_pred             -EEEEeC-----------------CEEEEEEeccCCCchHHHHHhc-CCCCHHHH------HHHHHHHHHHHHHHHHCCC
Q 023430          182 -YSFQTR-----------------SKLYLILDFINGGHLFFHLYRQ-GIFREDQA------RFYTAEIVSAVSHLHKCGI  236 (282)
Q Consensus       182 -~~~~~~-----------------~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~------~~i~~qi~~gL~ylH~~~i  236 (282)
                       +++...                 ..+|+||||++ |+|.+++... ..+.+...      ..++.||+.||.|||++||
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i  215 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGL  215 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC
Confidence             454433                 34899999999 8999999764 23444444      5667999999999999999


Q ss_pred             EeeccCCCceEEcCCCcEEEEecCcccccc----cchhheeeccCcccc
Q 023430          237 VHRDLKPENILMDSDGHVMAAHSLNSHNQL----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       237 iHrDlKp~NILl~~~~~v~l~Dfg~s~~~~----~~~~~~~~~ape~~~  281 (282)
                      |||||||+|||++.+|.+||+|||+++...    ...+++.|||||.+.
T Consensus       216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~  264 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLN  264 (371)
T ss_dssp             EETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHT
T ss_pred             ccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhcc
Confidence            999999999999999999999999996322    336689999999873

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2e-32  Score=242.38  Aligned_cols=162  Identities=17%  Similarity=0.270  Sum_probs=140.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--  187 (282)
                      ++|++++.||+|+||.||+|.+.     ..+..||||++....  .....+.+.+|+.+++.++||||+++++++...  
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDN-----LNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI   99 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred             ccEEEEEEeecCCCeEEEEEEEC-----CCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence            58999999999999999999976     456789999987532  233446688999999999999999999999765  


Q ss_pred             ---CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          188 ---SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       188 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                         ...|+||||+.+ +|.+++.. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       100 ~~~~~~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          100 EQMKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             TTCCCEEEEEECCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             cccceEEEEEcccCc-CHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence               368999999975 89888865 4689999999999999999999999999999999999999999999999999963


Q ss_pred             ccc----------chhheeeccCccc
Q 023430          265 QLC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~~----------~~~~~~~~ape~~  280 (282)
                      ...          ..|++.|+|||.+
T Consensus       178 ~~~~~~~~~~~~~~~gt~~y~aPE~~  203 (364)
T 3qyz_A          178 ADPDHDHTGFLTEYVATRWYRAPEIM  203 (364)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCHHHH
T ss_pred             cCCCCCccccccccccccCCCCCHHh
Confidence            221          1679999999975

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=8.7e-33  Score=239.48  Aligned_cols=173  Identities=20%  Similarity=0.226  Sum_probs=138.5

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|.+.+.||+|+||.||+|.+...  ...+..||+|++..... .....+.+.+|+.+++.++||||+++++++
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQE--DGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECT--TSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEecc--CCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            345567899999999999999999987642  23456899999876532 234456688999999999999999999998


Q ss_pred             EeCC-----EEEEEEeccCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc
Q 023430          185 QTRS-----KLYLILDFINGGHLFFHLYR------QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH  253 (282)
Q Consensus       185 ~~~~-----~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~  253 (282)
                      ....     ..++||||+++++|.+++..      ...+++..+..++.|++.||.|||++||+||||||+|||++.++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc
Confidence            7654     35999999999999999853      345899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccccc---------chhheeeccCccc
Q 023430          254 VMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       254 v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      +||+|||++.....         ..+++.|+|||.+
T Consensus       186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  221 (313)
T 3brb_A          186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL  221 (313)
T ss_dssp             EEECSCSCC----------------CCGGGSCHHHH
T ss_pred             EEEeecCcceecccccccCcccccCCCccccCchhh
Confidence            99999999964221         2447789999986

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-32  Score=235.45  Aligned_cols=169  Identities=20%  Similarity=0.224  Sum_probs=142.0

Q ss_pred             CcCCCCeEEEe-eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFR-VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      .+..++|.+.+ .||+|+||.||+|.++..   ..+..||+|++....  .....+.+.+|+.+++.++||||+++++++
T Consensus         5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   79 (287)
T 1u59_A            5 FLKRDNLLIADIELGCGNFGSVRQGVYRMR---KKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC   79 (287)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC------CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccHHHhhhhhccccccCceeEEEeEeccC---CCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe
Confidence            34556788887 999999999999987532   346779999997642  334556788999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                       ..+..++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.
T Consensus        80 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  158 (287)
T 1u59_A           80 -QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK  158 (287)
T ss_dssp             -ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             -cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECccccee
Confidence             456799999999999999988654 458999999999999999999999999999999999999999999999999986


Q ss_pred             ccc----------cchhheeeccCccc
Q 023430          264 NQL----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~----------~~~~~~~~~ape~~  280 (282)
                      ...          ...+++.|+|||.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~  185 (287)
T 1u59_A          159 ALGADDSYYTARSAGKWPLKWYAPECI  185 (287)
T ss_dssp             ECTTCSCEECCCCSSCCCGGGCCHHHH
T ss_pred             eeccCcceeeccccccccccccCHHHh
Confidence            321          11346889999976

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.3e-33  Score=241.59  Aligned_cols=169  Identities=25%  Similarity=0.355  Sum_probs=128.9

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      +.+..++|++.+.||+|+||.||+|.+.     ..+..||||++.....  ....+.+.+|+.+++.++||||+++++++
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   82 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCA-----PKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSF   82 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC---------CEEEEECCC------------------CCCCCCCTTBCCEEEEE
T ss_pred             cccchhhhhhhheeccccceEEEEEEEC-----CCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEE
Confidence            4566789999999999999999999865     3567899999865432  23345678899999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEE
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYR--------QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMA  256 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~--------~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l  256 (282)
                      ...+..++||||+++++|.+++..        ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|
T Consensus        83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  162 (303)
T 2vwi_A           83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI  162 (303)
T ss_dssp             ESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEE
T ss_pred             eecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEE
Confidence            999999999999999999998864        345899999999999999999999999999999999999999999999


Q ss_pred             EecCcccccc------------cchhheeeccCccc
Q 023430          257 AHSLNSHNQL------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       257 ~Dfg~s~~~~------------~~~~~~~~~ape~~  280 (282)
                      +|||++....            ...|++.|+|||.+
T Consensus       163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  198 (303)
T 2vwi_A          163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM  198 (303)
T ss_dssp             CCCHHHHHCC---------------CCCTTCCHHHH
T ss_pred             EeccchheeccCCCccchhhhcccCCCccccCHHHh
Confidence            9999885321            12578999999976

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=5.1e-33  Score=253.18  Aligned_cols=166  Identities=22%  Similarity=0.266  Sum_probs=140.6

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+.+..++|++.+.||+|+||.||+|.++.      ...||||+++....    ..+.+.+|+.+|+.++||||++++++
T Consensus       178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~  247 (452)
T 1fmk_A          178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG------TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAV  247 (452)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETT------TEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccChhHceeeeeecCCCCeEEEEEEECC------CceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            355667789999999999999999999762      34699999976432    23458899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +.. +..++||||+++|+|.+++..  ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+
T Consensus       248 ~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~  326 (452)
T 1fmk_A          248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL  326 (452)
T ss_dssp             ECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred             EcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCcc
Confidence            866 678999999999999999864  35689999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc--------hhheeeccCccc
Q 023430          262 SHNQLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~~--------~~~~~~~ape~~  280 (282)
                      ++....+        .++..|||||.+
T Consensus       327 a~~~~~~~~~~~~~~~~~~~y~aPE~~  353 (452)
T 1fmk_A          327 ARLIEDNEYTARQGAKFPIKWTAPEAA  353 (452)
T ss_dssp             TC--------------CCGGGSCHHHH
T ss_pred             ceecCCCceecccCCcccccccCHhHH
Confidence            9743221        345789999976

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=5.1e-33  Score=246.69  Aligned_cols=164  Identities=20%  Similarity=0.300  Sum_probs=127.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++++.||+|+||.||+|.+.     .++..||||++.... ......+.+.+|+.+|+.++||||+++++++... 
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  101 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR  101 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEET-----TTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             CCceEEeeEEeecCCeEEEEEEEC-----CCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence            368999999999999999999876     467789999986543 2233456678899999999999999999998654 


Q ss_pred             -----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          188 -----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       188 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                           ..+|+|||++ +++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          102 SLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             SGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC----
T ss_pred             ccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccc
Confidence                 5689999999 6789888765 56899999999999999999999999999999999999999999999999999


Q ss_pred             ccccc----chhheeeccCccc
Q 023430          263 HNQLC----CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~----~~~~~~~~ape~~  280 (282)
                      +....    ..|++.|+|||.+
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~  201 (367)
T 2fst_X          180 RHTADEMTGYVATRWYRAPEIM  201 (367)
T ss_dssp             -----------CCCTTCCHHHH
T ss_pred             ccccccCCCcCcCcCccChHHH
Confidence            74322    2679999999976

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=5.1e-33  Score=236.86  Aligned_cols=166  Identities=19%  Similarity=0.367  Sum_probs=142.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--  186 (282)
                      .++|++.+.||+|+||.||+++++     .+++.||+|++..... .....+.+.+|+.+++.++||||+++++++..  
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   78 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRK-----SDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT   78 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG
T ss_pred             hhheeeehhccCCCCcEEEEEEEC-----CCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC
Confidence            358999999999999999999976     4567899999976543 23445678899999999999999999998754  


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-----CEeeccCCCceEEcCCCcEEEE
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ----GIFREDQARFYTAEIVSAVSHLHKCG-----IVHRDLKPENILMDSDGHVMAA  257 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~gL~ylH~~~-----iiHrDlKp~NILl~~~~~v~l~  257 (282)
                      ....|+||||+++++|.+++...    ..+++..+..++.|++.||.|||+++     |+||||||+|||++.++.++|+
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~  158 (279)
T 2w5a_A           79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG  158 (279)
T ss_dssp             GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEEC
T ss_pred             CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEe
Confidence            57899999999999999998753    34899999999999999999999999     9999999999999999999999


Q ss_pred             ecCcccccc-------cchhheeeccCccc
Q 023430          258 HSLNSHNQL-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       258 Dfg~s~~~~-------~~~~~~~~~ape~~  280 (282)
                      |||++....       ...|++.|+|||.+
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~  188 (279)
T 2w5a_A          159 DFGLARILNHDTSFAKTFVGTPYYMSPEQM  188 (279)
T ss_dssp             CCCHHHHC---CHHHHHHHSCCTTCCHHHH
T ss_pred             cCchheeeccccccccccCCCccccChHHh
Confidence            999986322       22578999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=2.8e-33  Score=243.97  Aligned_cols=166  Identities=17%  Similarity=0.233  Sum_probs=141.1

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ...++|++.+.||+|+||.||+|++.      .+..||||++........  ...+.+|+.+++.++||||+++++++..
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~   98 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRLA------DGTLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRGFCMT   98 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECCS------SSCCEEEEECCC-----C--CCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred             HHhhccccceeEecCCCcEEEEEEec------CCCEEEEEEeccccCchH--HHHHHHHHHHHHhccCCCccceEEEEec
Confidence            34578999999999999999999743      466799999876542221  2247889999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEeeccCCCceEEcCCCcEEEEec
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQG----IFREDQARFYTAEIVSAVSHLHKC---GIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                      ....++||||+++|+|.+++....    .+++..+..++.|++.||.|||++   ||+||||||+|||++.++.+||+||
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Df  178 (326)
T 3uim_A           99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF  178 (326)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCC
T ss_pred             CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccC
Confidence            999999999999999999997643    389999999999999999999999   9999999999999999999999999


Q ss_pred             Ccccccc--------cchhheeeccCccc
Q 023430          260 LNSHNQL--------CCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~--------~~~~~~~~~ape~~  280 (282)
                      |++....        ...|++.|+|||.+
T Consensus       179 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~  207 (326)
T 3uim_A          179 GLAKLMDYKDTHVTTAVRGTIGHIAPEYL  207 (326)
T ss_dssp             SSCEECCSSSSCEECCCCSCGGGCCHHHH
T ss_pred             ccccccCcccccccccccCCcCccCHHHh
Confidence            9996321        11479999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=5.9e-33  Score=236.61  Aligned_cols=167  Identities=19%  Similarity=0.279  Sum_probs=142.1

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      ++.+..++|++.+.||+|+||.||+|.+.      .+..||+|++.....    ..+.+.+|+.+++.++||||++++++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~   76 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYN------GHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAV   76 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET------TTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEc------CCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEE
Confidence            45667789999999999999999999865      345799999875432    23568889999999999999999998


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +.. +..++||||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+
T Consensus        77 ~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  155 (279)
T 1qpc_A           77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL  155 (279)
T ss_dssp             ECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EcC-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcc
Confidence            864 56899999999999999886432  689999999999999999999999999999999999999999999999999


Q ss_pred             cccccc--------chhheeeccCcccc
Q 023430          262 SHNQLC--------CFFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~~~--------~~~~~~~~ape~~~  281 (282)
                      +.....        ..++..|+|||.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  183 (279)
T 1qpc_A          156 ARLIEDNEYTAREGAKFPIKWTAPEAIN  183 (279)
T ss_dssp             CEECSSSCEECCTTCCCCTTTSCHHHHH
T ss_pred             cccccCcccccccCCCCccCccChhhhc
Confidence            864221        13466899999863

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=2e-32  Score=234.45  Aligned_cols=166  Identities=28%  Similarity=0.443  Sum_probs=145.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++.+.||+|+||.||+|+++     ..++.||+|++...... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~-----~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   95 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDR-----ITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSS   95 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEc-----CCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence            47999999999999999999976     35678999999765432 3345668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l~Dfg~s~~~~  266 (282)
                      .++||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.+   +.+||+|||++....
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            99999999999999998888889999999999999999999999999999999999999764   469999999986322


Q ss_pred             ------cchhheeeccCcccc
Q 023430          267 ------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ------~~~~~~~~~ape~~~  281 (282)
                            ...+++.|+|||.+.
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~  196 (287)
T 2wei_A          176 QNTKMKDRIGTAYYIAPEVLR  196 (287)
T ss_dssp             CCSSCSCHHHHHTTCCHHHHT
T ss_pred             CCCccccccCcccccChHHhc
Confidence                  225799999999763

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=3.1e-32  Score=234.07  Aligned_cols=163  Identities=17%  Similarity=0.186  Sum_probs=141.3

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQ  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~  185 (282)
                      +..++|++.+.||+|+||.||+|++.     ..++.||+|++.....     .+.+.+|+.+++.+ +|+||+++++++.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~   76 (298)
T 1csn_A            7 VVGVHYKVGRRIGEGSFGVIFEGTNL-----LNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQ   76 (298)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEET-----TTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEE
T ss_pred             ccccceEEEEEEeecCCEEEEEEEEC-----CCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecC
Confidence            34568999999999999999999976     4577899999865432     12367899999999 6999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc-----EEEEec
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH-----VMAAHS  259 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~-----v~l~Df  259 (282)
                      .....++||||+ +++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.     ++|+||
T Consensus        77 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Df  155 (298)
T 1csn_A           77 EGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDF  155 (298)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred             CCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEEC
Confidence            999999999999 999999998754 5999999999999999999999999999999999999988776     999999


Q ss_pred             Ccccccc--------------cchhheeeccCccc
Q 023430          260 LNSHNQL--------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~--------------~~~~~~~~~ape~~  280 (282)
                      |++....              ...|++.|+|||.+
T Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  190 (298)
T 1csn_A          156 GMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH  190 (298)
T ss_dssp             TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             ccccccccccccccccccCccCCCCCcccCCchhh
Confidence            9996321              12579999999986

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.3e-32  Score=236.57  Aligned_cols=167  Identities=17%  Similarity=0.171  Sum_probs=138.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE-eCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ-TRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~  188 (282)
                      ..|++.++||+|+||.||+|.+....  .....+|+|.+....  .....+.+.+|+.+++.++||||+++++++. .++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  100 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-------CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred             eehhhcceeeecCCceEEEEEEecCC--CceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence            46999999999999999999876322  234568999886532  3344567889999999999999999999854 556


Q ss_pred             EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~  267 (282)
                      ..++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       101 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence            889999999999999999763 4588999999999999999999999999999999999999999999999999963211


Q ss_pred             -----------chhheeeccCccc
Q 023430          268 -----------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -----------~~~~~~~~ape~~  280 (282)
                                 ..+++.|+|||.+
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~  204 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESL  204 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHH
T ss_pred             cchhccccccCCCCCccccChHHh
Confidence                       1346789999976

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=9.9e-33  Score=235.43  Aligned_cols=159  Identities=21%  Similarity=0.306  Sum_probs=138.8

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe---
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT---  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---  186 (282)
                      ++|++.+.||+|+||.||+|++.     ..++.||+|++....       +.+.+|+.+++.++||||+++++++..   
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   78 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHR-----IDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDY   78 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEET-----TTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEc-----CCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEecccc
Confidence            36999999999999999999976     356789999987543       235679999999999999999998854   


Q ss_pred             -------------CCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC
Q 023430          187 -------------RSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       187 -------------~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~  251 (282)
                                   ...+++||||+++++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  158 (284)
T 2a19_B           79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT  158 (284)
T ss_dssp             C---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred             CcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC
Confidence                         44689999999999999999754  568999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCccccc------ccchhheeeccCccc
Q 023430          252 GHVMAAHSLNSHNQ------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       252 ~~v~l~Dfg~s~~~------~~~~~~~~~~ape~~  280 (282)
                      +.++|+|||++...      ....|++.|+|||.+
T Consensus       159 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  193 (284)
T 2a19_B          159 KQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQI  193 (284)
T ss_dssp             TEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHH
T ss_pred             CCEEECcchhheeccccccccccCCcccccChhhh
Confidence            99999999998632      223679999999976

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=100.00  E-value=1.2e-32  Score=236.76  Aligned_cols=165  Identities=22%  Similarity=0.377  Sum_probs=139.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+++     ..++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   75 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN   75 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred             cchhhhhhhhccCCCeeEEEEEEc-----CCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC
Confidence            468999999999999999999976     3567899999876532 2222355778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ-  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~-  265 (282)
                      ..|+||||+. ++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++... 
T Consensus        76 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  154 (299)
T 2r3i_A           76 KLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  154 (299)
T ss_dssp             EEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             ceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence            9999999998 5898888765  45899999999999999999999999999999999999999999999999988532 


Q ss_pred             ------ccchhheeeccCccc
Q 023430          266 ------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ------~~~~~~~~~~ape~~  280 (282)
                            ....+++.|+|||.+
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~  175 (299)
T 2r3i_A          155 VPVRTYTHEVVTLWYRAPEIL  175 (299)
T ss_dssp             CCSBCTTSCBCCCTTCCHHHH
T ss_pred             CCccccCcccccccccCcHHh
Confidence                  222568999999986

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.8e-32  Score=239.10  Aligned_cols=158  Identities=22%  Similarity=0.350  Sum_probs=137.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEe-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQT-  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~-  186 (282)
                      .++|++.+.||+|+||.||+|++.     ..++.||+|++....      .+.+.+|+.+++.++ ||||+++++++.. 
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~  103 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINI-----TNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDP  103 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECT
T ss_pred             CCceEEEEEecccCCeEEEEEEEC-----CCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccC
Confidence            468999999999999999999976     456789999986432      345788999999997 9999999999987 


Q ss_pred             -CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEEEecCcccc
Q 023430          187 -RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMAAHSLNSHN  264 (282)
Q Consensus       187 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l~Dfg~s~~  264 (282)
                       ....++||||+.+++|..++.   .+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus       104 ~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~  180 (330)
T 3nsz_A          104 VSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF  180 (330)
T ss_dssp             TTCCEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CCCceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence             668999999999999988774   389999999999999999999999999999999999999777 899999999963


Q ss_pred             c------ccchhheeeccCccc
Q 023430          265 Q------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~------~~~~~~~~~~ape~~  280 (282)
                      .      ....++..|+|||.+
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~  202 (330)
T 3nsz_A          181 YHPGQEYNVRVASRYFKGPELL  202 (330)
T ss_dssp             CCTTCCCCSCCSCGGGCCHHHH
T ss_pred             cCCCCccccccccccccChhhh
Confidence            2      122678999999986

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=5.4e-33  Score=257.97  Aligned_cols=165  Identities=22%  Similarity=0.267  Sum_probs=141.3

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      +.+..++|++.+.||+|+||.||+|.++.      ...||||+++....    ..+.+.+|+.+|+.++|+||+++++++
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~  331 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNG------TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVV  331 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETT------TEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECC------CceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            34556679999999999999999999762      35699999976432    234588899999999999999999998


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .. ..+||||||+.+|+|.+++..  ...+++.++..++.||+.||.|||+++||||||||+|||++.++.+||+|||++
T Consensus       332 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  410 (535)
T 2h8h_A          332 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA  410 (535)
T ss_dssp             CS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred             ee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence            66 678999999999999999864  356899999999999999999999999999999999999999999999999999


Q ss_pred             cccccc--------hhheeeccCccc
Q 023430          263 HNQLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~--------~~~~~~~ape~~  280 (282)
                      +....+        .++..|||||.+
T Consensus       411 ~~~~~~~~~~~~~~~~~~~y~aPE~~  436 (535)
T 2h8h_A          411 RLIEDNEYTARQGAKFPIKWTAPEAA  436 (535)
T ss_dssp             TTCCCHHHHTTCSTTSCGGGSCHHHH
T ss_pred             eecCCCceecccCCcCcccccCHHHh
Confidence            743222        345789999976

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-32  Score=245.22  Aligned_cols=160  Identities=23%  Similarity=0.362  Sum_probs=133.1

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ..++|++.+.||+|+||.||+|++.     .+++.||||++..+...       ..+|+.+|+.++||||+++++++...
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~   72 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDI-----ESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTT   72 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEET-----TTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC
T ss_pred             ccceEEEEEEEEeccCEEEEEEEEC-----CCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeec
Confidence            3568999999999999999999976     45778999998654321       23699999999999999999998543


Q ss_pred             --------------------------------------CEEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHH
Q 023430          188 --------------------------------------SKLYLILDFINGGHLFFHLY----RQGIFREDQARFYTAEIV  225 (282)
Q Consensus       188 --------------------------------------~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~  225 (282)
                                                            ..+++||||+++ +|.+.+.    ....+++..++.++.||+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~  151 (383)
T 3eb0_A           73 GDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLF  151 (383)
T ss_dssp             -------------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             CcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence                                                  348999999985 7666554    356799999999999999


Q ss_pred             HHHHHHHHCCCEeeccCCCceEEc-CCCcEEEEecCccccc------ccchhheeeccCccc
Q 023430          226 SAVSHLHKCGIVHRDLKPENILMD-SDGHVMAAHSLNSHNQ------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       226 ~gL~ylH~~~iiHrDlKp~NILl~-~~~~v~l~Dfg~s~~~------~~~~~~~~~~ape~~  280 (282)
                      .||.|||++||+||||||+|||++ .++.+||+|||+++..      ....+++.|+|||.+
T Consensus       152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~  213 (383)
T 3eb0_A          152 RAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELM  213 (383)
T ss_dssp             HHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHH
T ss_pred             HHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHh
Confidence            999999999999999999999998 6899999999999632      222668899999975

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-32  Score=235.19  Aligned_cols=166  Identities=19%  Similarity=0.195  Sum_probs=140.5

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|++.++||+|+||.||+|.+....  .....+|+|++....  .....+.+.+|+.+++.++||||+++++++...+..
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   97 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQA--QNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL   97 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSS--SCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred             EEccCceeccCCCceEEEEEEecCC--Cceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCC
Confidence            4677899999999999999876432  344579999986532  334456788999999999999999999999876655


Q ss_pred             -EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          191 -YLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       191 -~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                       ++||||+.+++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  177 (298)
T 3pls_A           98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR  177 (298)
T ss_dssp             CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred             cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence             999999999999999976 35688999999999999999999999999999999999999999999999999963211 


Q ss_pred             ----------chhheeeccCccc
Q 023430          268 ----------CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ----------~~~~~~~~ape~~  280 (282)
                                ..+++.|+|||.+
T Consensus       178 ~~~~~~~~~~~~~~~~y~aPE~~  200 (298)
T 3pls_A          178 EYYSVQQHRHARLPVKWTALESL  200 (298)
T ss_dssp             GGGCSCCSSCTTCGGGGSCHHHH
T ss_pred             cccccccCcCCCCCccccChhhh
Confidence                      2457899999986

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-33  Score=245.80  Aligned_cols=166  Identities=22%  Similarity=0.353  Sum_probs=135.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh--hhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK--KNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      .++|++.+.||+|+||.||+|+++     .++..||||++.......  ....+.+.+|+.+++.++||||+++++++..
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDK-----NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH   83 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECS-----SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             hcccEEEeEEeecCCEEEEEEEEC-----CCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee
Confidence            468999999999999999999976     356789999987543211  1112357789999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .+..++||||+++ +|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||++...
T Consensus        84 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           84 KSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             TTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             CCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence            9999999999986 787777654 35889999999999999999999999999999999999999999999999998642


Q ss_pred             c-------cchhheeeccCccc
Q 023430          266 L-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~-------~~~~~~~~~ape~~  280 (282)
                      .       ...|++.|+|||.+
T Consensus       163 ~~~~~~~~~~~~t~~y~aPE~~  184 (346)
T 1ua2_A          163 GSPNRAYTHQVVTRWYRAPELL  184 (346)
T ss_dssp             TSCCCCCCCSCCCCTTCCHHHH
T ss_pred             cCCcccCCcccccccccCchHh
Confidence            1       22679999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-32  Score=259.45  Aligned_cols=170  Identities=21%  Similarity=0.231  Sum_probs=141.7

Q ss_pred             CcCCCCeEEEe-eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFR-VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      .+..+++.+.+ .||+|+||.||+|.++..   ..+..||||+++...  .....+.+.+|+.+|+.++||||+++++++
T Consensus       331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~---~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~  405 (613)
T 2ozo_A          331 FLKRDNLLIADIELGCGNFGSVRQGVYRMR---KKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC  405 (613)
T ss_dssp             BCCTTSEEEEEEEEEECSSSEEEEEEEECS---SCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             eccccceeEcCcEEecCCCcEEEEEEEecC---CCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEe
Confidence            34556777776 899999999999987643   245679999997652  233456788999999999999999999998


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .. +.+++||||+++|+|.+++... ..+++..+..++.||+.||.|||+++||||||||+|||++.++.+||+|||+++
T Consensus       406 ~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~  484 (613)
T 2ozo_A          406 QA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSK  484 (613)
T ss_dssp             ES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTT
T ss_pred             cc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcc
Confidence            76 5699999999999999998654 458999999999999999999999999999999999999999999999999997


Q ss_pred             ccccc----------hhheeeccCcccc
Q 023430          264 NQLCC----------FFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~~----------~~~~~~~ape~~~  281 (282)
                      ....+          .+++.|||||+++
T Consensus       485 ~~~~~~~~~~~~~~~~~~~~y~APE~~~  512 (613)
T 2ozo_A          485 ALGADDSYYTARSAGKWPLKWYAPECIN  512 (613)
T ss_dssp             TCC--------------CCTTSCHHHHH
T ss_pred             cccCCCceeeeccCCCCccceeCHhhhc
Confidence            43211          2347899999873

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=8.5e-33  Score=236.79  Aligned_cols=171  Identities=18%  Similarity=0.250  Sum_probs=135.3

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||+|++....  .....||+|++...........+.+.+|+.+++.++||||+++++++..
T Consensus        15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   92 (291)
T 1u46_A           15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT   92 (291)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTT--SCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cchhHeeeeeeecCCCceeEEEEEeccCC--CceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc
Confidence            34568999999999999999999875321  2334689999876654445566778999999999999999999999987


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .. .++||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        93 ~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           93 PP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             SS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence            65 89999999999999988764 56899999999999999999999999999999999999999999999999998642


Q ss_pred             cc----------chhheeeccCccc
Q 023430          266 LC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~----------~~~~~~~~ape~~  280 (282)
                      ..          ..++..|+|||.+
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~  196 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESL  196 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHH
T ss_pred             cccccchhhhccCCCCceeeCchhh
Confidence            11          1346689999976

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=6.8e-33  Score=243.74  Aligned_cols=170  Identities=16%  Similarity=0.094  Sum_probs=136.5

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhh--------HHHHHHHHHHHHHhcCCCCeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN--------HVDYMKAERDILTKVTHPFIVQ  179 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~  179 (282)
                      ..++|++.+.||+|+||.||+|.+...  ...+..+|+|++.........        ....+.+|+.+++.++||||++
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNK--PEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSS--CGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCC--CCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            356899999999999999999998742  135678999998764311111        1123557888999999999999


Q ss_pred             eeEEEEe----CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC--c
Q 023430          180 LRYSFQT----RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG--H  253 (282)
Q Consensus       180 l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~--~  253 (282)
                      +++++..    ....|+||||+ +++|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++  .
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~  191 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQ  191 (345)
T ss_dssp             EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTS
T ss_pred             eecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCc
Confidence            9999987    67899999999 999999998777899999999999999999999999999999999999999887  9


Q ss_pred             EEEEecCccccc--------------ccchhheeeccCccc
Q 023430          254 VMAAHSLNSHNQ--------------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       254 v~l~Dfg~s~~~--------------~~~~~~~~~~ape~~  280 (282)
                      +||+|||+++..              ....|++.|||||.+
T Consensus       192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  232 (345)
T 2v62_A          192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH  232 (345)
T ss_dssp             EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH
T ss_pred             EEEEeCCCceecccccccccchhccccccCCCccccCHHHh
Confidence            999999999532              222679999999986

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.6e-33  Score=246.90  Aligned_cols=166  Identities=17%  Similarity=0.188  Sum_probs=134.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE-eCCE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ-TRSK  189 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~  189 (282)
                      .|++.+.||+|+||.||+|++....  .....||+|.+....  .....+.+.+|+.+++.++||||+++++++. ..+.
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~--~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~  165 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS  165 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETT--TEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCC--CcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC
Confidence            5888999999999999999876321  234568999886532  3345567889999999999999999999865 4568


Q ss_pred             EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .++||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...  
T Consensus       166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  245 (373)
T 3c1x_A          166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  245 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence            89999999999999999764 458899999999999999999999999999999999999999999999999996321  


Q ss_pred             ---------cchhheeeccCccc
Q 023430          267 ---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 ---------~~~~~~~~~ape~~  280 (282)
                               ...+++.|||||.+
T Consensus       246 ~~~~~~~~~~~~~~~~y~aPE~~  268 (373)
T 3c1x_A          246 EFDSVHNKTGAKLPVKWMALESL  268 (373)
T ss_dssp             ------------CCGGGSCHHHH
T ss_pred             ccccccccCCCCCcccccChHHh
Confidence                     11346789999976

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.98  E-value=3.2e-32  Score=238.05  Aligned_cols=163  Identities=18%  Similarity=0.268  Sum_probs=133.1

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHH--HHhcCCCCeeeeeE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI--LTKVTHPFIVQLRY  182 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~--l~~l~h~nIv~l~~  182 (282)
                      ..+..++|++.+.||+|+||.||+|++.       +..||||++.....      +.+..|.++  +..++|+||+++++
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~   74 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSLD-------ERPVAVKVFSFANR------QNFINEKNIYRVPLMEHDNIARFIV   74 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEET-------TEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEE
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEEC-------CeEEEEEEeeccch------hhHHHHHHHHHHHhccCcchhhhee
Confidence            4566789999999999999999999753       56899999865431      223334444  45689999999987


Q ss_pred             EEEe-----CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CCEeeccCCCceEE
Q 023430          183 SFQT-----RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC---------GIVHRDLKPENILM  248 (282)
Q Consensus       183 ~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~---------~iiHrDlKp~NILl  248 (282)
                      .+..     ...+++||||+++|+|.+++.... .++..+..++.|++.||.|||++         ||+||||||+|||+
T Consensus        75 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill  153 (336)
T 3g2f_A           75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV  153 (336)
T ss_dssp             EEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE
T ss_pred             cccccccCCCceEEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE
Confidence            6542     236799999999999999996654 58899999999999999999999         99999999999999


Q ss_pred             cCCCcEEEEecCcccccc---------------cchhheeeccCcccc
Q 023430          249 DSDGHVMAAHSLNSHNQL---------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       249 ~~~~~v~l~Dfg~s~~~~---------------~~~~~~~~~ape~~~  281 (282)
                      +.++.+||+|||++....               ...|++.|+|||.+.
T Consensus       154 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  201 (336)
T 3g2f_A          154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE  201 (336)
T ss_dssp             CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHT
T ss_pred             cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhc
Confidence            999999999999995321               125899999999873

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.98  E-value=1.8e-32  Score=236.44  Aligned_cols=167  Identities=23%  Similarity=0.354  Sum_probs=139.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh-hhHHHHHHHHHHHHHhcCCCCeeeeeEEEE--
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK-KNHVDYMKAERDILTKVTHPFIVQLRYSFQ--  185 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--  185 (282)
                      .++|++.+.||+|+||.||+|.+.     .++..||+|++....... ....+.+.+|+.+++.++|+||+++++++.  
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDS-----ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE   78 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBT-----TTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC
T ss_pred             ccceeEeeEEecCCCeEEEEEEEC-----CCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Confidence            468999999999999999999865     456789999997654322 334567889999999999999999999984  


Q ss_pred             eCCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .....|+||||+.++ |.+++..  ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.
T Consensus        79 ~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~  157 (305)
T 2wtk_C           79 EKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE  157 (305)
T ss_dssp             ---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence            455799999999887 6666655  3568999999999999999999999999999999999999999999999999986


Q ss_pred             ccc---------cchhheeeccCcccc
Q 023430          264 NQL---------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~---------~~~~~~~~~ape~~~  281 (282)
                      ...         ...|++.|+|||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (305)
T 2wtk_C          158 ALHPFAADDTCRTSQGSPAFQPPEIAN  184 (305)
T ss_dssp             ECCTTCSSCEECCCCSCGGGCCHHHHT
T ss_pred             ccCccccccccccCCCCCCCcChhhcc
Confidence            321         225799999999863

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.98  E-value=4.4e-32  Score=245.46  Aligned_cols=162  Identities=22%  Similarity=0.366  Sum_probs=138.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc------CCCCeeeeeE
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV------THPFIVQLRY  182 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~l~~  182 (282)
                      ..+|+++++||+|+||.||+|.+.     ..+..||||++....    ...+.+.+|+.+++.+      +|+||+++++
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~-----~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~  166 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDH-----KVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE  166 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEET-----TTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEEC-----CCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence            457999999999999999999876     457789999997543    2334566788888776      5779999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc--EEEEe
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH--VMAAH  258 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~--v~l~D  258 (282)
                      ++.....+++||||+. ++|.+++....  .+++..++.++.||+.||.|||++|||||||||+|||++.++.  +||+|
T Consensus       167 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~D  245 (429)
T 3kvw_A          167 NFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVID  245 (429)
T ss_dssp             EEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECC
T ss_pred             ecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEee
Confidence            9999999999999996 58988887653  4899999999999999999999999999999999999999987  99999


Q ss_pred             cCccccccc----chhheeeccCccc
Q 023430          259 SLNSHNQLC----CFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~~----~~~~~~~~ape~~  280 (282)
                      ||++.....    ..|++.|||||++
T Consensus       246 FG~a~~~~~~~~~~~gt~~y~aPE~~  271 (429)
T 3kvw_A          246 FGSSCYEHQRVYTYIQSRFYRAPEVI  271 (429)
T ss_dssp             CTTCEETTCCCCSSCSCGGGCCHHHH
T ss_pred             cccceecCCcccccCCCCCccChHHH
Confidence            999953222    2679999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.98  E-value=4.6e-32  Score=236.12  Aligned_cols=165  Identities=24%  Similarity=0.394  Sum_probs=141.2

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEe
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQT  186 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~  186 (282)
                      ..++|++.+.||+|+||.||+|++.     ..+..||+|++....    ...+.+.+|+.+++.+ +||||+++++++..
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEEC-----CCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            4578999999999999999999976     356789999987543    2234578899999998 79999999999987


Q ss_pred             ------CCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEe
Q 023430          187 ------RSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       187 ------~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                            ...+|+||||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~D  172 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVD  172 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECC
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEee
Confidence                  46899999999999999999764  4689999999999999999999999999999999999999999999999


Q ss_pred             cCcccccc-------cchhheeeccCcccc
Q 023430          259 SLNSHNQL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       259 fg~s~~~~-------~~~~~~~~~ape~~~  281 (282)
                      ||++....       ...|++.|+|||.+.
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  202 (326)
T 2x7f_A          173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIA  202 (326)
T ss_dssp             CTTTC-------------CCGGGCCHHHHC
T ss_pred             CcCceecCcCccccccccCCccccChhhhc
Confidence            99986421       225799999999863

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.98  E-value=1.1e-32  Score=242.17  Aligned_cols=168  Identities=24%  Similarity=0.382  Sum_probs=145.8

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhH--------------HHHHHHHHHHHHhc
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNH--------------VDYMKAERDILTKV  172 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~--------------~~~~~~E~~~l~~l  172 (282)
                      +..++|++.+.||+|+||.||+|.+       .+..||+|++..........              .+.+.+|+.+++.+
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  100 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK-------DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI  100 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE-------TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc-------CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC
Confidence            3457899999999999999999986       36789999998664332211              26688999999999


Q ss_pred             CCCCeeeeeEEEEeCCEEEEEEeccCCCchHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCC
Q 023430          173 THPFIVQLRYSFQTRSKLYLILDFINGGHLFFH------LYR--QGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKP  243 (282)
Q Consensus       173 ~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~------l~~--~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp  243 (282)
                      +||||+++++++...+..++||||+++++|.++      +..  ...+++..+..++.|++.||.|||+ +||+||||||
T Consensus       101 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p  180 (348)
T 2pml_X          101 KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKP  180 (348)
T ss_dssp             CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCG
T ss_pred             CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCCh
Confidence            999999999999999999999999999999887      554  4668999999999999999999999 9999999999


Q ss_pred             CceEEcCCCcEEEEecCccccc-----ccchhheeeccCcccc
Q 023430          244 ENILMDSDGHVMAAHSLNSHNQ-----LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       244 ~NILl~~~~~v~l~Dfg~s~~~-----~~~~~~~~~~ape~~~  281 (282)
                      +|||++.++.++|+|||++...     ....|+..|+|||.+.
T Consensus       181 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (348)
T 2pml_X          181 SNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFS  223 (348)
T ss_dssp             GGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGS
T ss_pred             HhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhc
Confidence            9999999999999999999642     2236799999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.98  E-value=4.5e-32  Score=236.57  Aligned_cols=171  Identities=19%  Similarity=0.269  Sum_probs=143.7

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      .+..++|++.+.||+|+||.||+|++.... ...+..||+|++...   .....+.+.+|+.+++.++||||+++++++.
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  112 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQ-DNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY  112 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTS-SSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEecccc-CCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence            344568999999999999999999865322 246788999998754   2344567889999999999999999999886


Q ss_pred             eCC--EEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          186 TRS--KLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       186 ~~~--~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ..+  .+++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus       113 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~  192 (326)
T 2w1i_A          113 SAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT  192 (326)
T ss_dssp             C----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             ecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcch
Confidence            544  789999999999999999875 45899999999999999999999999999999999999999999999999998


Q ss_pred             ccccc----------chhheeeccCccc
Q 023430          263 HNQLC----------CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~----------~~~~~~~~ape~~  280 (282)
                      .....          ..++..|+|||.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~  220 (326)
T 2w1i_A          193 KVLPQDKEYYKVKEPGESPIFWYAPESL  220 (326)
T ss_dssp             EECCSSCSEEECSSCCSCCGGGCCHHHH
T ss_pred             hhccccccccccccCCCCceeEECchhh
Confidence            63211          1346679999976

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.98  E-value=1.3e-32  Score=239.51  Aligned_cols=170  Identities=24%  Similarity=0.313  Sum_probs=145.0

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh---hHHHHHHHHHHHHHhcC--CCCeeee
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK---NHVDYMKAERDILTKVT--HPFIVQL  180 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~--h~nIv~l  180 (282)
                      ....++|++.+.||+|+||.||+|+++     ..+..||||++........   ...+.+.+|+.+++.++  |+||+++
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~  113 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRV-----SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL  113 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEET-----TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEEC-----CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence            345678999999999999999999876     4567899999976543221   11233567999999996  5999999


Q ss_pred             eEEEEeCCEEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc-CCCcEEEEe
Q 023430          181 RYSFQTRSKLYLILDFING-GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD-SDGHVMAAH  258 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~-~~~~v~l~D  258 (282)
                      ++++...+..++|||++.+ ++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|
T Consensus       114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~D  193 (320)
T 3a99_A          114 LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID  193 (320)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECC
T ss_pred             EEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEee
Confidence            9999999999999999986 89999998888899999999999999999999999999999999999999 789999999


Q ss_pred             cCcccccc-----cchhheeeccCccc
Q 023430          259 SLNSHNQL-----CCFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~-----~~~~~~~~~ape~~  280 (282)
                      ||++....     ...|++.|+|||.+
T Consensus       194 fg~~~~~~~~~~~~~~gt~~y~aPE~~  220 (320)
T 3a99_A          194 FGSGALLKDTVYTDFDGTRVYSPPEWI  220 (320)
T ss_dssp             CTTCEECCSSCBCCCCSCGGGSCHHHH
T ss_pred             CccccccccccccCCCCCccCCChHHh
Confidence            99986322     22579999999976

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.98  E-value=4.8e-32  Score=236.51  Aligned_cols=165  Identities=22%  Similarity=0.335  Sum_probs=129.0

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQ  185 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~  185 (282)
                      +...+|++.++||+|+||.||+|++.     ..++.||+|++....   ....+.+.+|+.+++.+. ||||+++++++.
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~   96 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDV-----GSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS   96 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEET-----TTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             ccCceEEEEEEEccCCceEEEEEEEC-----CCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence            44568999999999999999999986     356789999886543   334456788999999996 999999999984


Q ss_pred             --------eCCEEEEEEeccCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEcCCC
Q 023430          186 --------TRSKLYLILDFINGGHLFFHLYR---QGIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMDSDG  252 (282)
Q Consensus       186 --------~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~~~~  252 (282)
                              ....+++||||+. |+|.+++..   .+.+++..+..++.||+.||.|||++|  |+||||||+|||++.++
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~  175 (337)
T 3ll6_A           97 IGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG  175 (337)
T ss_dssp             ECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTS
T ss_pred             ccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCC
Confidence                    3446899999996 688888764   456999999999999999999999999  99999999999999999


Q ss_pred             cEEEEecCcccccc-------------------cchhheeeccCccc
Q 023430          253 HVMAAHSLNSHNQL-------------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       253 ~v~l~Dfg~s~~~~-------------------~~~~~~~~~ape~~  280 (282)
                      .+||+|||++....                   ...|++.|+|||.+
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (337)
T 3ll6_A          176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII  222 (337)
T ss_dssp             CEEBCCCTTCBCCSSCC------------------------------
T ss_pred             CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence            99999999996422                   22479999999987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.98  E-value=2.2e-32  Score=238.79  Aligned_cols=165  Identities=25%  Similarity=0.339  Sum_probs=141.8

Q ss_pred             CeEEE-eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCC
Q 023430          111 DFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRS  188 (282)
Q Consensus       111 ~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~  188 (282)
                      .|.+. +.||+|+||.||+|.++     ..++.||+|++..... .......+.+|+.+++.+. ||||+++++++....
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~  102 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISK-----STGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS  102 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             EEeeccceeCCCCCeEEEEEEEC-----CCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence            57777 89999999999999977     4567899999976543 2333556888999999995 699999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---CCcEEEEecCccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---DGHVMAAHSLNSH  263 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---~~~v~l~Dfg~s~  263 (282)
                      ..++||||+.+|+|.+++...  ..+++..++.++.|++.||.|||++||+||||||+|||++.   ++.+||+|||++.
T Consensus       103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~  182 (327)
T 3lm5_A          103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR  182 (327)
T ss_dssp             EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCE
T ss_pred             eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcccc
Confidence            999999999999999888543  56899999999999999999999999999999999999998   7899999999996


Q ss_pred             cccc------chhheeeccCcccc
Q 023430          264 NQLC------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~------~~~~~~~~ape~~~  281 (282)
                      ....      ..|++.|+|||.+.
T Consensus       183 ~~~~~~~~~~~~gt~~y~aPE~~~  206 (327)
T 3lm5_A          183 KIGHACELREIMGTPEYLAPEILN  206 (327)
T ss_dssp             EC---------CCCGGGCCHHHHT
T ss_pred             ccCCccccccccCCcCccCCeeec
Confidence            4222      25799999999874

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.98  E-value=1.1e-32  Score=234.92  Aligned_cols=165  Identities=19%  Similarity=0.313  Sum_probs=137.2

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .+.+..++|++.+.||+|+||.||++++.       +..||+|++....     ..+.+.+|+.+++.++||||++++++
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~   82 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDYR-------GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGV   82 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEET-------TEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEE
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEEc-------CCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34566789999999999999999999864       4679999986542     34568889999999999999999998


Q ss_pred             EEeC-CEEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          184 FQTR-SKLYLILDFINGGHLFFHLYRQGI--FREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       184 ~~~~-~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      +... +..++||||+++++|.+++...+.  +++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg  162 (278)
T 1byg_A           83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG  162 (278)
T ss_dssp             ECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred             EEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecc
Confidence            7554 478999999999999999876543  8899999999999999999999999999999999999999999999999


Q ss_pred             ccccccc----chhheeeccCccc
Q 023430          261 NSHNQLC----CFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~----~~~~~~~~ape~~  280 (282)
                      ++.....    ..++..|+|||.+
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~  186 (278)
T 1byg_A          163 LTKEASSTQDTGKLPVKWTAPEAL  186 (278)
T ss_dssp             C------------CCTTTSCHHHH
T ss_pred             ccccccccccCCCccccccCHHHh
Confidence            9864322    2457889999976

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=4.7e-32  Score=236.88  Aligned_cols=158  Identities=23%  Similarity=0.297  Sum_probs=134.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh--cCCCCeeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK--VTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~  187 (282)
                      ++|++.+.||+|+||.||+|++.       +..||||++.....      ..+.+|.+++..  ++||||+++++++...
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR-------GEKVAVKVFFTTEE------ASWFRETEIYQTVLMRHENILGFIAADIKG  103 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-------TEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred             cceEEEeEeecCCCeEEEEEEEC-------CceEEEEEEecccc------chhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence            57999999999999999999864       56799999865421      223445555554  4899999999999887


Q ss_pred             ----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeeccCCCceEEcCCCcEE
Q 023430          188 ----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKC--------GIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       188 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~--------~iiHrDlKp~NILl~~~~~v~  255 (282)
                          ..+|+||||+++|+|.+++... .+++..+..++.|++.||.|||++        ||+||||||+|||++.++.+|
T Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  182 (337)
T 3mdy_A          104 TGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC  182 (337)
T ss_dssp             CGGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             CCCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence                7899999999999999999654 689999999999999999999999        999999999999999999999


Q ss_pred             EEecCcccccc-----------cchhheeeccCcccc
Q 023430          256 AAHSLNSHNQL-----------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       256 l~Dfg~s~~~~-----------~~~~~~~~~ape~~~  281 (282)
                      |+|||++....           ...|++.|||||.+.
T Consensus       183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  219 (337)
T 3mdy_A          183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD  219 (337)
T ss_dssp             ECCCTTCEECC---------CCSSCSCGGGCCHHHHT
T ss_pred             EEeCCCceeeccccccccCCCCCCccCcceeChhhcc
Confidence            99999995321           125799999999873

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.98  E-value=6.8e-32  Score=237.54  Aligned_cols=163  Identities=21%  Similarity=0.321  Sum_probs=139.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|++.+.||+|+||.||+|.++     .++..||||++....  .......+.+|+.+++.++||||+++++++... 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   82 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHK-----PTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDS   82 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEEC-----CCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccc
Confidence            468999999999999999999976     456789999986432  233445677899999999999999999987654 


Q ss_pred             ----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          188 ----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                          ...|+||||+. ++|..++.. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        83 ~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           83 FENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR  160 (353)
T ss_dssp             STTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence                67999999997 588888865 568999999999999999999999999999999999999999999999999986


Q ss_pred             ccc-----------------cchhheeeccCccc
Q 023430          264 NQL-----------------CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~-----------------~~~~~~~~~ape~~  280 (282)
                      ...                 ...|++.|+|||.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  194 (353)
T 2b9h_A          161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM  194 (353)
T ss_dssp             ECC----------------CCCCCCGGGCCHHHH
T ss_pred             ccccccccccCccccccchhhccccccccCCeee
Confidence            321                 11568899999975

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.98  E-value=4.3e-32  Score=257.24  Aligned_cols=172  Identities=20%  Similarity=0.237  Sum_probs=144.6

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.+.||+|+||.||+|.++...  ..+..||+|++....  .....+.+.+|+.+++.++||||+++++++
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~  460 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPE--NPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVI  460 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSS--SCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCC--CccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            4455678999999999999999999987432  345679999886542  234456788999999999999999999998


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      . .+..|+||||+++|+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       461 ~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          461 T-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             e-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence            5 456899999999999999997654 58999999999999999999999999999999999999999999999999997


Q ss_pred             cccc--------chhheeeccCcccc
Q 023430          264 NQLC--------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~--------~~~~~~~~ape~~~  281 (282)
                      ....        ..+++.|||||.++
T Consensus       540 ~~~~~~~~~~~~~~~t~~y~aPE~~~  565 (656)
T 2j0j_A          540 YMEDSTYYKASKGKLPIKWMAPESIN  565 (656)
T ss_dssp             SCCC----------CCGGGCCHHHHH
T ss_pred             ecCCCcceeccCCCCCcceeCHHHhc
Confidence            4322        13467899999863

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.98  E-value=3.1e-32  Score=241.86  Aligned_cols=163  Identities=22%  Similarity=0.312  Sum_probs=138.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.+.||+|+||.||+|.++     .+++.||||++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  114 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDK-----RSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPAS  114 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             cccEEEEeEEecCCCeEEEEEEEC-----CCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccC
Confidence            368999999999999999999977     467789999997643 23344567889999999999999999999998766


Q ss_pred             EE------EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 KL------YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ~~------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ..      |+||||+. ++|...+.  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       115 ~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          115 SLRNFYDFYLVMPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             SSTTCCCCEEEEECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             CcccceeEEEEEcccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence            54      99999997 57877663  45899999999999999999999999999999999999999999999999999


Q ss_pred             ccccc----chhheeeccCccc
Q 023430          263 HNQLC----CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~----~~~~~~~~ape~~  280 (282)
                      .....    ..|++.|+|||.+
T Consensus       192 ~~~~~~~~~~~~t~~y~aPE~~  213 (371)
T 4exu_A          192 RHADAEMTGYVVTRWYRAPEVI  213 (371)
T ss_dssp             --------CTTCCCTTSCHHHH
T ss_pred             cccccCcCCcccCccccCHHHh
Confidence            64322    2569999999976

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.98  E-value=2.6e-32  Score=236.29  Aligned_cols=160  Identities=26%  Similarity=0.364  Sum_probs=134.0

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++.+.||+|+||.||++++.       ++.||+|++...     ...+.+.+|+.+++.++||||+++++++.+
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   72 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWR-------AKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN   72 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEET-------TEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEEC-------CeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence            44568999999999999999999864       456999998643     234568889999999999999999998763


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCEeeccCCCceEEcCCCc-EEEEec
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQG---IFREDQARFYTAEIVSAVSHLHK---CGIVHRDLKPENILMDSDGH-VMAAHS  259 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~NILl~~~~~-v~l~Df  259 (282)
                        ..++||||+++++|.+++....   .+++..+..++.|++.||.|||+   +||+||||||+|||++.++. +||+||
T Consensus        73 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Df  150 (307)
T 2eva_A           73 --PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF  150 (307)
T ss_dssp             --TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCC
T ss_pred             --CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccc
Confidence              4799999999999999997654   36889999999999999999999   89999999999999998887 799999


Q ss_pred             Cccccc----ccchhheeeccCccc
Q 023430          260 LNSHNQ----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~----~~~~~~~~~~ape~~  280 (282)
                      |++...    ....|++.|||||.+
T Consensus       151 g~~~~~~~~~~~~~gt~~y~aPE~~  175 (307)
T 2eva_A          151 GTACDIQTHMTNNKGSAAWMAPEVF  175 (307)
T ss_dssp             CC------------CCTTSSCHHHH
T ss_pred             ccccccccccccCCCCCceEChhhh
Confidence            998632    223679999999986

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.98  E-value=4.5e-32  Score=234.26  Aligned_cols=162  Identities=17%  Similarity=0.146  Sum_probs=139.0

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-hhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      |...+.||+|+||.||+|.+       .+..||+|++..... ......+.+.+|+.+++.++||||+++++++...+..
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  105 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV-------NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL  105 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES-------SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             cccCCccccCCCeEEEEEEE-------CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCce
Confidence            44458899999999999984       356799999875432 2234456788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc-
Q 023430          191 YLILDFINGGHLFFHLYR---QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL-  266 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~-  266 (282)
                      ++||||+++++|.+++..   ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.... 
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          106 CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK  185 (307)
T ss_dssp             EEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccccc
Confidence            999999999999999874   3458999999999999999999999999999999999999999999999999985321 


Q ss_pred             --------cchhheeeccCccc
Q 023430          267 --------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 --------~~~~~~~~~ape~~  280 (282)
                              ...|++.|+|||.+
T Consensus       186 ~~~~~~~~~~~g~~~y~aPE~~  207 (307)
T 2nru_A          186 FAQTVMTSRIVGTTAYMAPEAL  207 (307)
T ss_dssp             CSSCEECSSCCSCGGGCCHHHH
T ss_pred             ccccccccccCCCcCcCChHHh
Confidence                    12579999999976

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.98  E-value=4.5e-32  Score=239.70  Aligned_cols=166  Identities=20%  Similarity=0.300  Sum_probs=135.2

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh--------hhhhHHHHHHHHHHHHHhcCCCCeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI--------IKKNHVDYMKAERDILTKVTHPFIVQ  179 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~E~~~l~~l~h~nIv~  179 (282)
                      ..++|++.+.||+|+||.||+|.+.      .+..||||++.....        ......+.+.+|+.+++.++||||++
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDS------EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECT------TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hccceEEeEEeccCCCEEEEEEECC------CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            4578999999999999999999854      367899999865322        12233467889999999999999999


Q ss_pred             eeEEEEe-----CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc
Q 023430          180 LRYSFQT-----RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH  253 (282)
Q Consensus       180 l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~  253 (282)
                      +++++..     ...+|+||||+. |+|.+.+... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~  172 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND  172 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred             eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC
Confidence            9999854     337899999998 5777777654 36899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccccc------chhheeeccCccc
Q 023430          254 VMAAHSLNSHNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       254 v~l~Dfg~s~~~~~------~~~~~~~~ape~~  280 (282)
                      +||+|||++.....      ..+++.|+|||.+
T Consensus       173 ~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~  205 (362)
T 3pg1_A          173 ITICDFNLAREDTADANKTHYVTHRWYRAPELV  205 (362)
T ss_dssp             EEECCTTC---------------CGGGCCHHHH
T ss_pred             EEEEecCcccccccccccceecccceecCcHHh
Confidence            99999999963222      2568899999976

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.98  E-value=3.2e-32  Score=242.94  Aligned_cols=162  Identities=22%  Similarity=0.314  Sum_probs=136.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC--------CCCeeee
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT--------HPFIVQL  180 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~l  180 (282)
                      .++|++.++||+|+||.||+|++.     ..++.||||++....    ...+.+.+|+.+++.++        |+||+++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~  106 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDI-----QGKKFVAMKVVKSAE----HYTETALDEIRLLKSVRNSDPNDPNREMVVQL  106 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEec-----CCCeEEEEEEEecCC----cchHHHHHHHHHHHHHhhcCCCCCCcceeeee
Confidence            478999999999999999999876     457789999997542    33456788999999885        7889999


Q ss_pred             eEEEE----eCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCC-
Q 023430          181 RYSFQ----TRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDG-  252 (282)
Q Consensus       181 ~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~-  252 (282)
                      ++++.    ....+|+||||+ +++|.+.+...  ..+++..++.++.||+.||.|||++ ||+||||||+|||++.++ 
T Consensus       107 ~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~  185 (397)
T 1wak_A          107 LDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQ  185 (397)
T ss_dssp             EEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHH
T ss_pred             ecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccch
Confidence            99987    456899999999 55666666544  4589999999999999999999998 999999999999999776 


Q ss_pred             ------------------------------------------------cEEEEecCccccc----ccchhheeeccCccc
Q 023430          253 ------------------------------------------------HVMAAHSLNSHNQ----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       253 ------------------------------------------------~v~l~Dfg~s~~~----~~~~~~~~~~ape~~  280 (282)
                                                                      .+||+|||++...    ....||+.|||||.+
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~  265 (397)
T 1wak_A          186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVL  265 (397)
T ss_dssp             HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHH
T ss_pred             hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhh
Confidence                                                            7999999999632    223679999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.97  E-value=1e-31  Score=234.23  Aligned_cols=170  Identities=21%  Similarity=0.292  Sum_probs=129.7

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHH-HHHhcCCCCeeeee
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERD-ILTKVTHPFIVQLR  181 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~nIv~l~  181 (282)
                      ..+.+..++|++.+.||+|+||.||+|.++     .+++.||||++.....  ......+..|+. +++.++||||++++
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~   87 (327)
T 3aln_A           15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHK-----PSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFY   87 (327)
T ss_dssp             EEECCCSCSEEC-CEEEECSSEEEEEEEET-----TTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEE
T ss_pred             HhcccCHHHhhehheeccCCCEEEEEEEEc-----CCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeee
Confidence            345667789999999999999999999976     4577899999976432  222233444555 77788999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEE
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYR-----QGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~  255 (282)
                      +++...+..++||||+.+ +|.+++..     ...+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+|
T Consensus        88 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~k  166 (327)
T 3aln_A           88 GALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIK  166 (327)
T ss_dssp             EEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEE
T ss_pred             eEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEE
Confidence            999999999999999986 77766653     46789999999999999999999998 999999999999999999999


Q ss_pred             EEecCccccccc------chhheeeccCccc
Q 023430          256 AAHSLNSHNQLC------CFFFFLFLGGGVF  280 (282)
Q Consensus       256 l~Dfg~s~~~~~------~~~~~~~~ape~~  280 (282)
                      |+|||++.....      ..|++.|+|||.+
T Consensus       167 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~  197 (327)
T 3aln_A          167 LCDFGISGQLVDSIAKTRDAGCRPYMAPERI  197 (327)
T ss_dssp             ECCCSSSCC----------------------
T ss_pred             EccCCCceecccccccccCCCCccccCceee
Confidence            999999964322      2679999999987

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=4.2e-32  Score=244.91  Aligned_cols=158  Identities=25%  Similarity=0.424  Sum_probs=130.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR--  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--  187 (282)
                      .+|++.++||+|+||.||+|+++     .++..||||++.....       ...+|+++|+.++|+||+++++++...  
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~  121 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLC-----DSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGE  121 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred             ceEEeeeEEeeCCCEEEEEEEEC-----CCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCC
Confidence            36999999999999999999987     3567899999865431       134699999999999999999988542  


Q ss_pred             ----CEEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC-CcEEEEe
Q 023430          188 ----SKLYLILDFINGGHLFFHLY----RQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD-GHVMAAH  258 (282)
Q Consensus       188 ----~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~-~~v~l~D  258 (282)
                          ..+++||||+++ +|...+.    ....+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|
T Consensus       122 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~D  200 (420)
T 1j1b_A          122 KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD  200 (420)
T ss_dssp             TTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             CCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEecc
Confidence                247799999986 5555443    24679999999999999999999999999999999999999965 5689999


Q ss_pred             cCcccccc------cchhheeeccCccc
Q 023430          259 SLNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~------~~~~~~~~~ape~~  280 (282)
                      ||+++...      ...|++.|||||++
T Consensus       201 FG~a~~~~~~~~~~~~~~t~~y~aPE~~  228 (420)
T 1j1b_A          201 FGSAKQLVRGEPNVSYICSRYYRAPELI  228 (420)
T ss_dssp             CTTCEECCTTCCCCSCCSCTTSCCHHHH
T ss_pred             chhhhhcccCCCceeeeeCCCcCCHHHH
Confidence            99996422      22669999999976

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.97  E-value=2.3e-32  Score=240.87  Aligned_cols=163  Identities=15%  Similarity=0.163  Sum_probs=136.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCC---CCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeee------
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDG---DSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQ------  179 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~------  179 (282)
                      .++|++.+.||+|+||.||+|+++.+...   ..+..||+|++...        +.+.+|+.+++.++||||++      
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~  112 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY  112 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence            46899999999999999999998743211   13678999998754        23678999999999999987      


Q ss_pred             ---------eeEEEEe-CCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceE
Q 023430          180 ---------LRYSFQT-RSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENIL  247 (282)
Q Consensus       180 ---------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NIL  247 (282)
                               +++++.. ....|+||||+ +++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||
T Consensus       113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl  191 (352)
T 2jii_A          113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF  191 (352)
T ss_dssp             TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred             cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence                     5667665 67899999999 99999999875  67999999999999999999999999999999999999


Q ss_pred             EcCCC--cEEEEecCccccccc--------------chhheeeccCccc
Q 023430          248 MDSDG--HVMAAHSLNSHNQLC--------------CFFFFLFLGGGVF  280 (282)
Q Consensus       248 l~~~~--~v~l~Dfg~s~~~~~--------------~~~~~~~~ape~~  280 (282)
                      ++.++  .+||+|||++.....              ..|++.|+|||.+
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  240 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLH  240 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHH
T ss_pred             EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHH
Confidence            99998  899999999953211              1679999999986

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=1.2e-31  Score=233.94  Aligned_cols=164  Identities=22%  Similarity=0.330  Sum_probs=140.2

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCC------Ceeeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP------FIVQLR  181 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~------nIv~l~  181 (282)
                      ..++|++.+.||+|+||.||+|.+..    ..+..||+|++....    ...+.+.+|+.+++.++|+      +|++++
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~   83 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHK----AGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLNTTDPNSTFRCVQML   83 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETT----TTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecC----CCCcEEEEEEEecCC----chhHHHHHHHHHHHHhhhcCCCCceeeEeee
Confidence            35689999999999999999998742    356789999986532    3345678899999888765      499999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---------
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---------  250 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---------  250 (282)
                      +++...+..++||||+ +++|.+++...+  .+++..+..++.|++.||.|||++||+||||||+|||++.         
T Consensus        84 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A           84 EWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             cccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCC
Confidence            9999999999999999 889999987765  5889999999999999999999999999999999999987         


Q ss_pred             ----------CCcEEEEecCcccccc----cchhheeeccCccc
Q 023430          251 ----------DGHVMAAHSLNSHNQL----CCFFFFLFLGGGVF  280 (282)
Q Consensus       251 ----------~~~v~l~Dfg~s~~~~----~~~~~~~~~ape~~  280 (282)
                                ++.++|+|||++....    ...|++.|+|||.+
T Consensus       163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~  206 (339)
T 1z57_A          163 KIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVI  206 (339)
T ss_dssp             ---CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHH
T ss_pred             ccccccccccCCCceEeeCcccccCccccccccCCccccChHHh
Confidence                      6689999999986422    22679999999986

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.1e-32  Score=238.62  Aligned_cols=168  Identities=24%  Similarity=0.330  Sum_probs=135.9

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh---hHHHHHHHHHHHHHhc----CCCCeeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK---NHVDYMKAERDILTKV----THPFIVQL  180 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l----~h~nIv~l  180 (282)
                      ..++|++.+.||+|+||.||+|+++     ..++.||+|++........   .....+.+|+.+++.+    +|+||+++
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~  103 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGHRL-----TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL  103 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEECT-----TTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred             hhhceEEeeEEEcCCCEEEEEEEEc-----cCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence            3568999999999999999999865     4567899999976543221   1122355789999888    89999999


Q ss_pred             eEEEEeCCEEEEEEec-cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc-CCCcEEEEe
Q 023430          181 RYSFQTRSKLYLILDF-INGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD-SDGHVMAAH  258 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~-~~~~v~l~D  258 (282)
                      ++++...+..++|||+ +.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++ .++.++|+|
T Consensus       104 ~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~d  183 (312)
T 2iwi_A          104 LDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLID  183 (312)
T ss_dssp             EEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECC
T ss_pred             EEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEE
Confidence            9999998999999999 78999999998888899999999999999999999999999999999999999 889999999


Q ss_pred             cCcccccc-----cchhheeeccCccc
Q 023430          259 SLNSHNQL-----CCFFFFLFLGGGVF  280 (282)
Q Consensus       259 fg~s~~~~-----~~~~~~~~~ape~~  280 (282)
                      ||++....     ...|+..|+|||.+
T Consensus       184 fg~~~~~~~~~~~~~~~~~~y~aPE~~  210 (312)
T 2iwi_A          184 FGSGALLHDEPYTDFDGTRVYSPPEWI  210 (312)
T ss_dssp             CSSCEECCSSCBCCCCSCTTTSCHHHH
T ss_pred             cchhhhcccCcccccCCcccccCceee
Confidence            99986322     22579999999976

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.5e-32  Score=259.32  Aligned_cols=163  Identities=22%  Similarity=0.317  Sum_probs=137.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||++.++.    ..++.||||++....  .....+.+.+|+.+++.++||||+++++++...+
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~----~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  152 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRN----VNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTD  152 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGG----GTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEEC
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcC----CCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecC
Confidence            4789999999999999999999763    146789999886532  2344556889999999999999999999998765


Q ss_pred             E-----EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          189 K-----LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       189 ~-----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .     .||||||++|++|.+++..  .+++.+++.++.||+.||.|||++|||||||||+|||++.+ .+||+|||+++
T Consensus       153 ~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~  229 (681)
T 2pzi_A          153 RHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVS  229 (681)
T ss_dssp             TTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccch
Confidence            5     7999999999999887754  68999999999999999999999999999999999999875 99999999997


Q ss_pred             ccc---cchhheeeccCccc
Q 023430          264 NQL---CCFFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~---~~~~~~~~~ape~~  280 (282)
                      ...   ...||+.|||||.+
T Consensus       230 ~~~~~~~~~gt~~y~aPE~~  249 (681)
T 2pzi_A          230 RINSFGYLYGTPGFQAPEIV  249 (681)
T ss_dssp             ETTCCSCCCCCTTTSCTTHH
T ss_pred             hcccCCccCCCccccCHHHH
Confidence            432   22579999999976

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=1e-31  Score=230.52  Aligned_cols=163  Identities=21%  Similarity=0.289  Sum_probs=138.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|....+||+|+||.||+|.+.     .++..||+|++....   ....+.+.+|+.+++.++||||+++++++...+.
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   93 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDL-----SNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF   93 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEET-----TTCCEEEEEEEECCC---C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             cCCCCcEEEeecCcEEEEEEEEC-----CCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCc
Confidence            34555568999999999999976     356789999987543   2344668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQG---IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNSHNQ  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s~~~  265 (282)
                      .++||||+++++|.+++....   .+++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||++...
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~  173 (295)
T 2clq_A           94 IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL  173 (295)
T ss_dssp             EEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred             EEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccccccc
Confidence            999999999999999987652   4568889999999999999999999999999999999987 899999999998642


Q ss_pred             c-------cchhheeeccCccc
Q 023430          266 L-------CCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~-------~~~~~~~~~ape~~  280 (282)
                      .       ...|++.|+|||.+
T Consensus       174 ~~~~~~~~~~~~~~~y~aPE~~  195 (295)
T 2clq_A          174 AGINPCTETFTGTLQYMAPEII  195 (295)
T ss_dssp             CC-----CCCCCCGGGCCHHHH
T ss_pred             CCCCCcccccCCCccccChhhh
Confidence            1       22578999999986

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=6.9e-32  Score=237.87  Aligned_cols=163  Identities=21%  Similarity=0.307  Sum_probs=138.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|.+.+.||+|+||.||+|.++     .+++.||||++.... ......+.+.+|+.+++.++||||+++++++....
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   96 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDK-----RSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPAS   96 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             CceEEEeeeEecCCCeEEEEEEEC-----CCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEeccc
Confidence            468999999999999999999976     457789999987643 23344566889999999999999999999998765


Q ss_pred             E------EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 K------LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ~------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .      .|+||||+. ++|..++.  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        97 ~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A           97 SLRNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             SGGGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             ccccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccc
Confidence            3      599999997 58876663  35899999999999999999999999999999999999999999999999999


Q ss_pred             ccccc----chhheeeccCccc
Q 023430          263 HNQLC----CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~----~~~~~~~~ape~~  280 (282)
                      .....    ..+++.|+|||.+
T Consensus       174 ~~~~~~~~~~~~t~~y~aPE~~  195 (353)
T 3coi_A          174 RHADAEMTGYVVTRWYRAPEVI  195 (353)
T ss_dssp             TC--------CCSBCCSCHHHH
T ss_pred             cCCCCCccccccCcCcCCHHHH
Confidence            74322    2669999999976

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=8.6e-32  Score=240.95  Aligned_cols=158  Identities=23%  Similarity=0.350  Sum_probs=129.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS-  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-  188 (282)
                      .+|++.++||+|+||.||+|++..      ...+|+|++......       ..+|+.+|+.++||||+++++++...+ 
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~------~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~  106 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVE------SDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGD  106 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT------TEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESS
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECC------CCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCC
Confidence            479999999999999999999762      234888887654321       236999999999999999999986543 


Q ss_pred             -----EEEEEEeccCCCchHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc-CCCcEEEEec
Q 023430          189 -----KLYLILDFINGGHLFFHL---YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD-SDGHVMAAHS  259 (282)
Q Consensus       189 -----~~~lv~e~~~~g~L~~~l---~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~-~~~~v~l~Df  259 (282)
                           .+++||||++++.+....   .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus       107 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DF  186 (394)
T 4e7w_A          107 KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF  186 (394)
T ss_dssp             SSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             CCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeC
Confidence                 388999999875443322   2256799999999999999999999999999999999999999 7999999999


Q ss_pred             Ccccccc------cchhheeeccCccc
Q 023430          260 LNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~------~~~~~~~~~ape~~  280 (282)
                      |+++...      ...+++.|+|||.+
T Consensus       187 G~a~~~~~~~~~~~~~~t~~y~aPE~~  213 (394)
T 4e7w_A          187 GSAKILIAGEPNVSYICSRYYRAPELI  213 (394)
T ss_dssp             TTCEECCTTCCCCSSCSCGGGCCHHHH
T ss_pred             CCcccccCCCCCcccccCcCccCHHHH
Confidence            9996422      22668999999976

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=2.5e-31  Score=230.37  Aligned_cols=162  Identities=20%  Similarity=0.292  Sum_probs=133.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE---
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ---  185 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~---  185 (282)
                      .++|++++.||+|+||.||+|.+.     ..++.||+|++....   ....+.+.+|+.+++.++||||+++++++.   
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   81 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDN-----DCDKRVAIKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVFEILGPSG   81 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEET-----TTTEEEEEEEEECCS---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTS
T ss_pred             CCceeEEEEeccCCCeEEEEEEEC-----CCCeEEEEEEEecCC---hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccc
Confidence            468999999999999999999976     456789999986542   344566889999999999999999998873   


Q ss_pred             -----------eCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc-CCCc
Q 023430          186 -----------TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD-SDGH  253 (282)
Q Consensus       186 -----------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~-~~~~  253 (282)
                                 .....|+||||+. |+|.+++. .+.+++..++.++.|++.||.|||++||+||||||+|||++ .++.
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  159 (320)
T 2i6l_A           82 SQLTDDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV  159 (320)
T ss_dssp             CBCCC----CCSCSEEEEEEECCS-EEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTE
T ss_pred             cccccccccccccCceeEEeeccC-CCHHHHhh-cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCe
Confidence                       3468999999998 58988885 45689999999999999999999999999999999999997 5679


Q ss_pred             EEEEecCcccccc----------cchhheeeccCccc
Q 023430          254 VMAAHSLNSHNQL----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       254 v~l~Dfg~s~~~~----------~~~~~~~~~ape~~  280 (282)
                      +||+|||++....          ...++..|+|||.+
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  196 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL  196 (320)
T ss_dssp             EEECCCTTCBCC--------CCCGGGSCCTTCCHHHH
T ss_pred             EEEccCccccccCCCcccccccccccccccccCcHHh
Confidence            9999999986421          22458889999975

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=1.7e-31  Score=231.42  Aligned_cols=166  Identities=23%  Similarity=0.312  Sum_probs=141.8

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC--CCCeeeeeEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT--HPFIVQLRYSF  184 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~  184 (282)
                      +..++|++.+.||+|+||.||++.+.      .+..||+|++..... .....+.+.+|+.+++.++  |+||+++++++
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNE------KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECT------TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcC------CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            34567999999999999999999854      366799999876432 3345567889999999997  59999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ...+..++||| +.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++ ++.+||+|||++..
T Consensus        98 ~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~  175 (313)
T 3cek_A           98 ITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQ  175 (313)
T ss_dssp             ECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred             ecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecccccc
Confidence            99999999999 66789999998888899999999999999999999999999999999999996 58999999999964


Q ss_pred             cc---------cchhheeeccCcccc
Q 023430          265 QL---------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~---------~~~~~~~~~ape~~~  281 (282)
                      ..         ...|++.|+|||.+.
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~  201 (313)
T 3cek_A          176 MQPDTTSVVKDSQVGTVNYMPPEAIK  201 (313)
T ss_dssp             --------------CCGGGCCHHHHT
T ss_pred             ccCccccccccCCCCCCCcCCHHHHh
Confidence            21         125799999999863

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=4.8e-32  Score=243.33  Aligned_cols=162  Identities=25%  Similarity=0.362  Sum_probs=126.4

Q ss_pred             CCeEE-EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--
Q 023430          110 GDFEI-FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--  186 (282)
Q Consensus       110 ~~y~~-~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--  186 (282)
                      +.|++ .++||+|+||.||+|+++..   ..+..||||++.....     ...+.+|+.+|+.++||||+++++++..  
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~---~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDG---KDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHA   91 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSS---SCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccC---CCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence            35666 45799999999999997732   3567799999875432     1346789999999999999999999954  


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE----cCCCc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ---------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM----DSDGH  253 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~---------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl----~~~~~  253 (282)
                      ...+|+||||+.+ +|..++...         ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.
T Consensus        92 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  170 (405)
T 3rgf_A           92 DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  170 (405)
T ss_dssp             TTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred             CCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence            6789999999975 777766532         248999999999999999999999999999999999999    67899


Q ss_pred             EEEEecCcccccc----------cchhheeeccCccc
Q 023430          254 VMAAHSLNSHNQL----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       254 v~l~Dfg~s~~~~----------~~~~~~~~~ape~~  280 (282)
                      +||+|||++....          ...||+.|||||++
T Consensus       171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  207 (405)
T 3rgf_A          171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL  207 (405)
T ss_dssp             EEECCTTCCC----------------CCCTTCCHHHH
T ss_pred             EEEEECCCceecCCCCcccccCCCceecCcccCchhh
Confidence            9999999996321          12569999999986

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=3.8e-31  Score=231.89  Aligned_cols=161  Identities=23%  Similarity=0.374  Sum_probs=120.6

Q ss_pred             CCCeEEEe-eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe-
Q 023430          109 PGDFEIFR-VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT-  186 (282)
Q Consensus       109 ~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-  186 (282)
                      .++|.+.+ +||+|+||.||+|.++     .+++.||||++.....       ...+....++.++|+||+++++++.. 
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~   94 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHR-----RTGQKCALKLLYDSPK-------ARQEVDHHWQASGGPHIVCILDVYENM   94 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEESSHH-------HHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEEC-----CCCCEEEEEEecCcHH-------HHHHHHHHHHhcCCCChHHHHHHHhhc
Confidence            46899965 6999999999999987     4567899999865321       12223334667899999999999876 


Q ss_pred             ---CCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC---CcEEEEe
Q 023430          187 ---RSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD---GHVMAAH  258 (282)
Q Consensus       187 ---~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~---~~v~l~D  258 (282)
                         ...+++||||+++|+|.+++....  .+++..++.++.|++.||.|||++||+||||||+|||++.+   +.+||+|
T Consensus        95 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~D  174 (336)
T 3fhr_A           95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTD  174 (336)
T ss_dssp             ETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred             cCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEec
Confidence               456899999999999999998753  58999999999999999999999999999999999999864   5599999


Q ss_pred             cCcccccc-----cchhheeeccCcccc
Q 023430          259 SLNSHNQL-----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       259 fg~s~~~~-----~~~~~~~~~ape~~~  281 (282)
                      ||++....     ...|++.|||||.+.
T Consensus       175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~  202 (336)
T 3fhr_A          175 FGFAKETTQNALQTPCYTPYYVAPEVLG  202 (336)
T ss_dssp             CTTCEEC---------------------
T ss_pred             cccceeccccccccCCCCcCccChhhhC
Confidence            99996432     226699999999873

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.97  E-value=3.6e-31  Score=227.05  Aligned_cols=162  Identities=15%  Similarity=0.141  Sum_probs=133.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE-EEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS-FQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~-~~~~  187 (282)
                      .++|++.+.||+|+||.||+|++.     ..++.||||++......     +.+.+|+.+++.++|++++..+.. +...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~   77 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDI-----AAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEG   77 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEET-----TTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEET
T ss_pred             CCceEEeeeecCCCCeEEEEEEEc-----CCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCC
Confidence            368999999999999999999976     45678999987654322     236779999999998877765554 4677


Q ss_pred             CEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE---cCCCcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM---DSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl---~~~~~v~l~Dfg~s~  263 (282)
                      ...++||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++.
T Consensus        78 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~  156 (296)
T 4hgt_A           78 DYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             CceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence            8899999999 8999999875 4569999999999999999999999999999999999999   789999999999996


Q ss_pred             ccc--------------cchhheeeccCcccc
Q 023430          264 NQL--------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~--------------~~~~~~~~~ape~~~  281 (282)
                      ...              ...|++.|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  188 (296)
T 4hgt_A          157 KYRDARTHQHIPYRENKNLTGTARYASINTHL  188 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHT
T ss_pred             eccCcccCccCCCCcccccCCCccccchHHhc
Confidence            321              226799999999863

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=1.9e-31  Score=232.06  Aligned_cols=165  Identities=24%  Similarity=0.328  Sum_probs=136.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc---CCCCeeeeeEEEE-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV---THPFIVQLRYSFQ-  185 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~-  185 (282)
                      ++|++.+.||+|+||.||+|++..    ..+..||+|++....... .....+.+|+.+++.+   +||||+++++++. 
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~   85 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   85 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT----TTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             hceeeeeeecccccEEEEEEEecC----CCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence            589999999999999999999742    346789999987543211 1112355677777665   8999999999987 


Q ss_pred             ----eCCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEec
Q 023430          186 ----TRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHS  259 (282)
Q Consensus       186 ----~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Df  259 (282)
                          .....++||||+. |+|.+++....  .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+||
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           86 SRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             EECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecC
Confidence                4567999999998 59999987653  4899999999999999999999999999999999999999999999999


Q ss_pred             Ccccccc------cchhheeeccCccc
Q 023430          260 LNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       260 g~s~~~~------~~~~~~~~~ape~~  280 (282)
                      |++....      ...|++.|+|||.+
T Consensus       165 g~~~~~~~~~~~~~~~~~~~y~aPE~~  191 (326)
T 1blx_A          165 GLARIYSFQMALTSVVVTLWYRAPEVL  191 (326)
T ss_dssp             CSCCCCCGGGGGCCCCCCCTTCCHHHH
T ss_pred             cccccccCCCCccccccccceeCHHHH
Confidence            9986422      22569999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.97  E-value=7.3e-31  Score=225.11  Aligned_cols=147  Identities=15%  Similarity=0.175  Sum_probs=130.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|++.     ..++.||||++...........+.+.+|+.+++.++||||+++++++...+
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~  104 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDT-----ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA  104 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEET-----TTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             cCcEEEEEEEcccCCeEEEEEEec-----CCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC
Confidence            468999999999999999999976     457789999998765444555677889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      ..|+||||++|++|.+++.. + ....++..++.|++.||.|||++||+||||||+|||++.+|.+||+++|..
T Consensus       105 ~~~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~  176 (286)
T 3uqc_A          105 GGLVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATM  176 (286)
T ss_dssp             EEEEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCC
T ss_pred             cEEEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecccc
Confidence            99999999999999999843 3 466678899999999999999999999999999999999999999977654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=3.2e-31  Score=232.13  Aligned_cols=157  Identities=24%  Similarity=0.284  Sum_probs=136.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh--cCCCCeeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK--VTHPFIVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~  187 (282)
                      ++|++.+.||+|+||.||+|++.       ++.||||++....      .+.+.+|+++++.  ++||||+++++++...
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~  108 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR-------GEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKD  108 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-------TEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc-------CccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence            47999999999999999999863       5679999986432      2446678888887  7899999999999877


Q ss_pred             C----EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCEeeccCCCceEEcCCCcEE
Q 023430          188 S----KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH--------KCGIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       188 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH--------~~~iiHrDlKp~NILl~~~~~v~  255 (282)
                      .    .+++||||+++|+|.+++.+ ..+++..+..++.|++.||.|||        +++|+||||||+|||++.++.+|
T Consensus       109 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k  187 (342)
T 1b6c_B          109 NGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  187 (342)
T ss_dssp             CSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred             CCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence            6    89999999999999999975 46899999999999999999999        89999999999999999999999


Q ss_pred             EEecCcccccc-----------cchhheeeccCccc
Q 023430          256 AAHSLNSHNQL-----------CCFFFFLFLGGGVF  280 (282)
Q Consensus       256 l~Dfg~s~~~~-----------~~~~~~~~~ape~~  280 (282)
                      |+|||++....           ...|++.|+|||.+
T Consensus       188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  223 (342)
T 1b6c_B          188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL  223 (342)
T ss_dssp             ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHH
T ss_pred             EEECCCceeccccccccccccccCCcCcccCCHhhh
Confidence            99999985321           12579999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=1.6e-31  Score=235.87  Aligned_cols=162  Identities=23%  Similarity=0.328  Sum_probs=123.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||.||+|+++     .++..||||++.......    +...+|+..++.++||||+++++++...+
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~----~~~~~~~~~l~~l~h~niv~~~~~~~~~~   92 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEK-----STGMSVAIKKVIQDPRFR----NRELQIMQDLAVLHHPNIVQLQSYFYTLG   92 (360)
T ss_dssp             HTTEEEC----------CEEEEET-----TTCCEEEEEEEECCTTCC----CHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEEecCcccc----HHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence            368999999999999999999987     356789999886543221    23456788888999999999999987643


Q ss_pred             E-------EEEEEeccCCCchHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHH--HCCCEeeccCCCceEEcC-CCcE
Q 023430          189 K-------LYLILDFINGGHLFFHL----YRQGIFREDQARFYTAEIVSAVSHLH--KCGIVHRDLKPENILMDS-DGHV  254 (282)
Q Consensus       189 ~-------~~lv~e~~~~g~L~~~l----~~~~~~~~~~~~~i~~qi~~gL~ylH--~~~iiHrDlKp~NILl~~-~~~v  254 (282)
                      .       +++||||++++ |...+    .....+++..+..++.|++.||.|||  ++||+||||||+|||++. ++.+
T Consensus        93 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~  171 (360)
T 3e3p_A           93 ERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTL  171 (360)
T ss_dssp             SSCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEE
T ss_pred             cccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcE
Confidence            3       89999999875 43333    24566899999999999999999999  999999999999999997 8999


Q ss_pred             EEEecCcccccc------cchhheeeccCccc
Q 023430          255 MAAHSLNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       255 ~l~Dfg~s~~~~------~~~~~~~~~ape~~  280 (282)
                      ||+|||++....      ...|++.|+|||.+
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  203 (360)
T 3e3p_A          172 KLCDFGSAKKLSPSEPNVAYICSRYYRAPELI  203 (360)
T ss_dssp             EECCCTTCBCCCTTSCCCSTTSCGGGCCHHHH
T ss_pred             EEeeCCCceecCCCCCcccccCCcceeCHHHH
Confidence            999999996322      23679999999976

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.97  E-value=6.9e-31  Score=225.42  Aligned_cols=162  Identities=15%  Similarity=0.142  Sum_probs=136.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE-EEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS-FQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~-~~~~  187 (282)
                      .++|++.+.||+|+||.||+|++.     ..++.||+|++.....     .+.+.+|+.+++.++|++++..+.. +...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~   77 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDI-----AAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEG   77 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET-----TTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEET
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEc-----CCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCC
Confidence            468999999999999999999976     4577899999865432     1247789999999998876665544 4667


Q ss_pred             CEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE---cCCCcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM---DSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl---~~~~~v~l~Dfg~s~  263 (282)
                      ...++||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++.
T Consensus        78 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A           78 DYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             CceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence            7899999999 8999999874 4569999999999999999999999999999999999999   588999999999986


Q ss_pred             cc--------------ccchhheeeccCcccc
Q 023430          264 NQ--------------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~--------------~~~~~~~~~~ape~~~  281 (282)
                      ..              ....|++.|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  188 (296)
T 3uzp_A          157 KYRDARTHQHIPYRENKNLTGTARYASINTHL  188 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHT
T ss_pred             cccccccccccccccccccccccccCChhhhc
Confidence            32              1226799999999863

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.97  E-value=1.4e-32  Score=238.48  Aligned_cols=169  Identities=21%  Similarity=0.314  Sum_probs=141.6

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeE
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRY  182 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~  182 (282)
                      ..+.+..++|++.+.||+|+||.||+|++.+        .+|+|++..... .....+.+.+|+.+++.++|+||+++++
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--------~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~   96 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--------EVAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFMG   96 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--------SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCCCTTBCCCCE
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC--------eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCCCCCEeEEEE
Confidence            4566778899999999999999999998752        389999875432 2222344677999999999999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      ++...+..++||||+++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++ ++.++|+|||+
T Consensus        97 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~  175 (319)
T 2y4i_B           97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGL  175 (319)
T ss_dssp             EEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred             EEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCC
Confidence            9999999999999999999999987654 589999999999999999999999999999999999998 78999999998


Q ss_pred             cccc------------ccchhheeeccCcccc
Q 023430          262 SHNQ------------LCCFFFFLFLGGGVFN  281 (282)
Q Consensus       262 s~~~------------~~~~~~~~~~ape~~~  281 (282)
                      +...            ....|++.|+|||.+.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  207 (319)
T 2y4i_B          176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIR  207 (319)
T ss_dssp             CC----------CCSCBCCSGGGGTSCHHHHS
T ss_pred             ccccccccccccccccccCCCcccccChHHhh
Confidence            7521            1125789999999874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=5.9e-31  Score=231.19  Aligned_cols=164  Identities=21%  Similarity=0.290  Sum_probs=137.7

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC------eeeee
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF------IVQLR  181 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~  181 (282)
                      ..++|++.+.||+|+||.||+|.+...    .+..||+|++....    ...+.+.+|+.+++.++|++      ++.++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~   88 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHAR----GKSQVALKIIRNVG----KYREAARLEINVLKKIKEKDKENKFLCVLMS   88 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTT----TTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCC----CceEEEEEEEcccc----cchhHHHHHHHHHHHHhhcCCCCceeEEEee
Confidence            356899999999999999999997632    23679999987532    23455778999999887665      89999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE-----------
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM-----------  248 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl-----------  248 (282)
                      +++...+..++||||+ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||+           
T Consensus        89 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~  167 (355)
T 2eu9_A           89 DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE  167 (355)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECC
T ss_pred             eeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccc
Confidence            9999999999999999 56676776654  368999999999999999999999999999999999999           


Q ss_pred             --------cCCCcEEEEecCcccccc----cchhheeeccCccc
Q 023430          249 --------DSDGHVMAAHSLNSHNQL----CCFFFFLFLGGGVF  280 (282)
Q Consensus       249 --------~~~~~v~l~Dfg~s~~~~----~~~~~~~~~ape~~  280 (282)
                              +.++.+||+|||++....    ...|++.|||||.+
T Consensus       168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~  211 (355)
T 2eu9_A          168 HKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVI  211 (355)
T ss_dssp             C-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHH
T ss_pred             cccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeee
Confidence                    668899999999996422    22679999999986

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.97  E-value=5.8e-31  Score=228.12  Aligned_cols=167  Identities=24%  Similarity=0.329  Sum_probs=129.3

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ...++|++++.||+|+||.||+|+++     .+++.||||++..... .....+.+.++..+++.++||||+++++++..
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~   95 (318)
T 2dyl_A           22 AEINDLENLGEMGSGTCGQVWKMRFR-----KTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHDCPYIVQCFGTFIT   95 (318)
T ss_dssp             CCGGGEEEEEEC------CEEEEEET-----TTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             hhhccccccceeeecCCeeEEEEEEe-----cCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCceeeEEEEEec
Confidence            34568999999999999999999986     3567899999976542 22233445556667888999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+..++||||+ ++.+..+... ...+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++..
T Consensus        96 ~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~  174 (318)
T 2dyl_A           96 NTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGR  174 (318)
T ss_dssp             SSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred             CCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence            99999999999 4455554443 46799999999999999999999995 999999999999999999999999999853


Q ss_pred             cc------cchhheeeccCccc
Q 023430          265 QL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~------~~~~~~~~~ape~~  280 (282)
                      ..      ...|++.|+|||.+
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~  196 (318)
T 2dyl_A          175 LVDDKAKDRSAGCAAYMAPERI  196 (318)
T ss_dssp             ------------CCTTCCHHHH
T ss_pred             ccCCccccccCCCccccChhhc
Confidence            22      22679999999987

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.97  E-value=6.4e-31  Score=240.72  Aligned_cols=162  Identities=17%  Similarity=0.185  Sum_probs=137.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC-CCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH-PFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~  187 (282)
                      .++|++.++||+|+||.||+|++.     ..+..||||++......     +.+.+|+.+++.++| ++|..+..++...
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~   75 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEG   75 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEET-----TTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEET
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEEC-----CCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeC
Confidence            468999999999999999999976     45678999988654321     236779999999986 5566666677788


Q ss_pred             CEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE---cCCCcEEEEecCccc
Q 023430          188 SKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM---DSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl---~~~~~v~l~Dfg~s~  263 (282)
                      ...+|||||+ +++|.+++.. .+.+++..++.|+.||+.||.|||++|||||||||+||||   +.++.+||+|||+++
T Consensus        76 ~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A           76 DYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             CEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence            8999999999 8999999975 4579999999999999999999999999999999999999   688999999999996


Q ss_pred             ccc--------------cchhheeeccCcccc
Q 023430          264 NQL--------------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~--------------~~~~~~~~~ape~~~  281 (282)
                      ...              ...|++.|||||.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~  186 (483)
T 3sv0_A          155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHL  186 (483)
T ss_dssp             ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT
T ss_pred             eccCCccccccccccccccCCCccccCHHHhc
Confidence            321              235799999999863

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=6.9e-31  Score=232.69  Aligned_cols=163  Identities=20%  Similarity=0.301  Sum_probs=137.7

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-----------CCC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-----------HPF  176 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~n  176 (282)
                      ..++|++.+.||+|+||.||+|++.     ..++.||||++....    ...+.+.+|+.+++.++           |+|
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~   87 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDM-----VNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANH   87 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEec-----CCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccch
Confidence            4568999999999999999999976     457789999997543    23345778999988876           899


Q ss_pred             eeeeeEEEEeCC----EEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCEeeccCCCceEEc
Q 023430          177 IVQLRYSFQTRS----KLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKC-GIVHRDLKPENILMD  249 (282)
Q Consensus       177 Iv~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~NILl~  249 (282)
                      |+++++++...+    .+++||||+ +++|.+++...  ..+++..+..++.||+.||.|||++ ||+||||||+|||++
T Consensus        88 i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~  166 (373)
T 1q8y_A           88 ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  166 (373)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             HHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEe
Confidence            999999988654    789999999 88999998763  4589999999999999999999998 999999999999995


Q ss_pred             ------CCCcEEEEecCccccc----ccchhheeeccCccc
Q 023430          250 ------SDGHVMAAHSLNSHNQ----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       250 ------~~~~v~l~Dfg~s~~~----~~~~~~~~~~ape~~  280 (282)
                            ..+.+||+|||++...    ....|++.|||||.+
T Consensus       167 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~  207 (373)
T 1q8y_A          167 IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVL  207 (373)
T ss_dssp             EEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHH
T ss_pred             ccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHH
Confidence                  3447999999999632    223679999999986

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=1.9e-30  Score=231.20  Aligned_cols=162  Identities=22%  Similarity=0.361  Sum_probs=137.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CC-----CeeeeeE
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HP-----FIVQLRY  182 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~  182 (282)
                      .++|++.+.||+|+||.||+|+++     ..++.||||++....    ...+.+.+|+.+++.++ |+     +|+++++
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  123 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDR-----VEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR  123 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET-----TTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEc-----CCCcEEEEEEEeccH----HHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence            578999999999999999999976     456789999997542    23455677888888875 55     4999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH--HCCCEeeccCCCceEEc--CCCcEEE
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLH--KCGIVHRDLKPENILMD--SDGHVMA  256 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH--~~~iiHrDlKp~NILl~--~~~~v~l  256 (282)
                      ++...+..|+||||+.+ +|.+++...  ..+++..++.++.|++.||.|||  ++|||||||||+|||++  .++.+||
T Consensus       124 ~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL  202 (382)
T 2vx3_A          124 HFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKI  202 (382)
T ss_dssp             EEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEE
T ss_pred             eeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEE
Confidence            99999999999999965 999988765  45899999999999999999999  57999999999999995  4788999


Q ss_pred             EecCccccc----ccchhheeeccCccc
Q 023430          257 AHSLNSHNQ----LCCFFFFLFLGGGVF  280 (282)
Q Consensus       257 ~Dfg~s~~~----~~~~~~~~~~ape~~  280 (282)
                      +|||++...    ....|++.|||||++
T Consensus       203 ~DFG~a~~~~~~~~~~~~t~~y~aPE~~  230 (382)
T 2vx3_A          203 VDFGSSCQLGQRIYQYIQSRFYRSPEVL  230 (382)
T ss_dssp             CCCTTCEETTCCCCSSCSCGGGCCHHHH
T ss_pred             EeccCceecccccccccCCccccChHHH
Confidence            999999643    223679999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.97  E-value=1.1e-30  Score=236.33  Aligned_cols=164  Identities=20%  Similarity=0.206  Sum_probs=131.9

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYS  183 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~  183 (282)
                      ..++..+|.+.++||+|+||+||....      ..++.||||++......      .+.+|+.+|+.+ +||||++++++
T Consensus        19 ~~i~~~~y~~~~~LG~G~~G~V~~~~~------~~~~~vAvK~~~~~~~~------~~~~E~~~l~~l~~HpnIv~l~~~   86 (432)
T 3p23_A           19 VIVGKISFCPKDVLGHGAEGTIVYRGM------FDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYFCT   86 (432)
T ss_dssp             EEETTEEEEEEEEEEECGGGCEEEEEE------SSSSEEEEEEECTTTEE------ECHHHHHHHHHSCCCTTBCCEEEE
T ss_pred             EEEccEEEecCCeeecCcCEEEEEEEE------eCCeEEEEEEECHHHHH------HHHHHHHHHHhccCCCCcCeEEEE
Confidence            345556799999999999999654322      24678999998654321      245799999999 79999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-----CCcEEEE
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-----DGHVMAA  257 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-----~~~v~l~  257 (282)
                      +......|+|||||. |+|.+++.... .+.+..+..++.||+.||.|||++||+||||||+|||++.     ...+||+
T Consensus        87 ~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~  165 (432)
T 3p23_A           87 EKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMIS  165 (432)
T ss_dssp             EEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEEC
T ss_pred             EecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEe
Confidence            999999999999997 59999887653 3555667889999999999999999999999999999953     2358899


Q ss_pred             ecCccccccc----------chhheeeccCcccc
Q 023430          258 HSLNSHNQLC----------CFFFFLFLGGGVFN  281 (282)
Q Consensus       258 Dfg~s~~~~~----------~~~~~~~~ape~~~  281 (282)
                      |||+|.....          ..||+.|||||++.
T Consensus       166 DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~  199 (432)
T 3p23_A          166 DFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS  199 (432)
T ss_dssp             CTTEEECC------------CCSCTTSCCGGGTS
T ss_pred             cccceeeccCCCcceeeccccCCCcCccChhhhh
Confidence            9999864221          25799999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=2.6e-30  Score=234.16  Aligned_cols=158  Identities=24%  Similarity=0.219  Sum_probs=125.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~  188 (282)
                      +.|.+.+.||+|+||+||.+..      ..++.||||++..+.      .+.+.+|+.+|+.+ +||||+++++++....
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~------~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~   82 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGS------FQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDR   82 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEE------SSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred             heeeccCeEeeCCCeEEEEEEE------ECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC
Confidence            4567778999999999986532      246789999986542      23467899999876 8999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCC-------CHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC----------
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIF-------REDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD----------  251 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~-------~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~----------  251 (282)
                      .+|+|||||. |+|.+++......       .+..+..++.||+.||.|||++||+||||||+|||++.+          
T Consensus        83 ~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~  161 (434)
T 2rio_A           83 FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTG  161 (434)
T ss_dssp             EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred             eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccC
Confidence            9999999996 5999999765432       223456799999999999999999999999999999754          


Q ss_pred             ---CcEEEEecCccccccc-----------chhheeeccCccc
Q 023430          252 ---GHVMAAHSLNSHNQLC-----------CFFFFLFLGGGVF  280 (282)
Q Consensus       252 ---~~v~l~Dfg~s~~~~~-----------~~~~~~~~ape~~  280 (282)
                         +.+||+|||++.....           ..|++.|||||++
T Consensus       162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  204 (434)
T 2rio_A          162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL  204 (434)
T ss_dssp             CCSCEEEECCCTTCEECCC--------------CCTTSCHHHH
T ss_pred             CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHh
Confidence               4899999999963211           2579999999987

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.96  E-value=3.3e-29  Score=215.80  Aligned_cols=143  Identities=27%  Similarity=0.464  Sum_probs=125.2

Q ss_pred             CCCeEEE-eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHH-HhcCCCCeeeeeEEEEe
Q 023430          109 PGDFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL-TKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       109 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~  186 (282)
                      .++|.+. +.||+|+||.||+|.++     ..++.||+|++...        ..+.+|+.++ +.++||||+++++++..
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~   82 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNK-----RTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYEN   82 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEc-----CCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhh
Confidence            3578887 78999999999999976     45678999998643        2356688887 66689999999999887


Q ss_pred             ----CCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---CCcEEEE
Q 023430          187 ----RSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---DGHVMAA  257 (282)
Q Consensus       187 ----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---~~~v~l~  257 (282)
                          ...+++||||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+|||++.   ++.++|+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~  162 (299)
T 3m2w_A           83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT  162 (299)
T ss_dssp             EETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred             hcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEe
Confidence                678999999999999999998754  5899999999999999999999999999999999999998   7889999


Q ss_pred             ecCcccc
Q 023430          258 HSLNSHN  264 (282)
Q Consensus       258 Dfg~s~~  264 (282)
                      |||++..
T Consensus       163 Dfg~a~~  169 (299)
T 3m2w_A          163 DFGFAKE  169 (299)
T ss_dssp             CCTTCEE
T ss_pred             ccccccc
Confidence            9999953

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.96  E-value=5.8e-31  Score=247.33  Aligned_cols=166  Identities=25%  Similarity=0.324  Sum_probs=139.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--  186 (282)
                      .++|++.+.||+|+||.||+|.++     ..+..||||++....  .....+.+.+|+.+++.++||||+++++++..  
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~-----~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~   85 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQ-----DTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ   85 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCT-----TTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEEC-----CCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccc
Confidence            368999999999999999998865     456789999987542  23445678899999999999999999988755  


Q ss_pred             ----CCEEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc---EEE
Q 023430          187 ----RSKLYLILDFINGGHLFFHLYRQG---IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH---VMA  256 (282)
Q Consensus       187 ----~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~---v~l  256 (282)
                          .+..|+||||+++|+|.+++....   .+++..+..++.|++.||.|||++||+||||||+|||++.++.   ++|
T Consensus        86 ~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL  165 (676)
T 3qa8_A           86 KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKI  165 (676)
T ss_dssp             CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred             cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEE
Confidence                667899999999999999998644   5889999999999999999999999999999999999997775   999


Q ss_pred             EecCcccccc------cchhheeeccCcccc
Q 023430          257 AHSLNSHNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       257 ~Dfg~s~~~~------~~~~~~~~~ape~~~  281 (282)
                      +|||++....      ...|++.|+|||.+.
T Consensus       166 ~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~  196 (676)
T 3qa8_A          166 IDLGYAKELDQGELCTEFVGTLQYLAPELLE  196 (676)
T ss_dssp             CSCCCCCBTTSCCCCCCCCSCCTTCSSCSSC
T ss_pred             cccccccccccccccccccCCcccCChHHhc
Confidence            9999996422      126799999999874

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.96  E-value=6.1e-30  Score=237.32  Aligned_cols=151  Identities=15%  Similarity=0.025  Sum_probs=117.3

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-----hhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-----IKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      ..++||+|+||.||++.+       .+..+++|+......     ......+.+.+|+.+|+.++||||+++..++...+
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~  412 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-------LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD  412 (540)
T ss_dssp             --------CCEEEEEEEC-------SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT
T ss_pred             CCCEEeeCCCEEEEEEEE-------CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC
Confidence            356899999999999953       345688887644322     12223456889999999999999996655556777


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      ..||||||++|++|.+++..        +..++.|++.||.|||++||+||||||+|||++.  .+||+|||+|+.... 
T Consensus       413 ~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          413 NKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             TTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred             ccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence            78999999999999998864        5688999999999999999999999999999998  999999999974222 


Q ss_pred             -------------chhheeeccCcccc
Q 023430          268 -------------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 -------------~~~~~~~~ape~~~  281 (282)
                                   -.||+.|||||+|+
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~  509 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWE  509 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHH
Confidence                         26799999999874

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.95  E-value=4.8e-29  Score=224.43  Aligned_cols=165  Identities=15%  Similarity=0.070  Sum_probs=123.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC-CCee---------
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH-PFIV---------  178 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv---------  178 (282)
                      ...|.+.++||+|+||.||+|++.     .+++.||||++...........+.+.+|+.+++.+.| .|+.         
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~  151 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQ-----ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI  151 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBC
T ss_pred             ceeEEEecccccCCCEEEEEEEec-----CCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccc
Confidence            345888999999999999999977     4567899999875443333445678899999999987 2211         


Q ss_pred             ------ee------eEEEEe-----CCEEEEEEeccCCCchHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC
Q 023430          179 ------QL------RYSFQT-----RSKLYLILDFINGGHLFFHLYR-------QGIFREDQARFYTAEIVSAVSHLHKC  234 (282)
Q Consensus       179 ------~l------~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~-------~~~~~~~~~~~i~~qi~~gL~ylH~~  234 (282)
                            .+      ...+..     ....+++|+++ +++|.+++..       ...+++..+..++.|++.||.|||++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  230 (413)
T 3dzo_A          152 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY  230 (413)
T ss_dssp             CCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                  11      111111     12467777765 5788887742       22366778888999999999999999


Q ss_pred             CCEeeccCCCceEEcCCCcEEEEecCcccccccc----hhheeeccCccc
Q 023430          235 GIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       235 ~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~----~~~~~~~ape~~  280 (282)
                      |||||||||+|||++.++.+||+|||+++.....    .| +.|||||.+
T Consensus       231 ~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~  279 (413)
T 3dzo_A          231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETT  279 (413)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHH
T ss_pred             CcccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhh
Confidence            9999999999999999999999999998643222    56 999999987

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.95  E-value=3.2e-28  Score=208.21  Aligned_cols=146  Identities=16%  Similarity=0.142  Sum_probs=113.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhh---------------hHHHHHHHHHHHHHhcCCC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKK---------------NHVDYMKAERDILTKVTHP  175 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~E~~~l~~l~h~  175 (282)
                      .|.+.+.||+|+||.||+|.+.      ++..||+|+++.......               .....+.+|+.+|+.++  
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~~------~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--  162 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYSE------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--  162 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEET------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred             EEEecCEeccCCCceEEEEEeC------CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence            3455599999999999999862      467899999865331111               13456889999999999  


Q ss_pred             CeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEE
Q 023430          176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM  255 (282)
Q Consensus       176 nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~  255 (282)
                      | +++++++.. +..|+||||++|++|.+ +.      ......++.|++.||.|||++||+||||||+|||++ +|.++
T Consensus       163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vk  232 (282)
T 1zar_A          163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIW  232 (282)
T ss_dssp             T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEE
T ss_pred             C-CCcCeEEec-cceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEE
Confidence            5 666665544 45699999999999976 31      133557999999999999999999999999999999 99999


Q ss_pred             EEecCcccccccchhheeeccCccc
Q 023430          256 AAHSLNSHNQLCCFFFFLFLGGGVF  280 (282)
Q Consensus       256 l~Dfg~s~~~~~~~~~~~~~ape~~  280 (282)
                      |+|||+|..      +..++|||.|
T Consensus       233 l~DFG~a~~------~~~~~a~e~l  251 (282)
T 1zar_A          233 IIDFPQSVE------VGEEGWREIL  251 (282)
T ss_dssp             ECCCTTCEE------TTSTTHHHHH
T ss_pred             EEECCCCeE------CCCCCHHHHH
Confidence            999999963      3446677665

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.90  E-value=2.8e-24  Score=181.39  Aligned_cols=140  Identities=19%  Similarity=0.124  Sum_probs=105.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcE--EEEEEeechhhhh---------------------hhHHHHHHHHHH
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGI--YAMKVMRKDTIIK---------------------KNHVDYMKAERD  167 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~--vavK~~~~~~~~~---------------------~~~~~~~~~E~~  167 (282)
                      -|++.+.||+|+||.||+|.+.     ..+..  ||||+++......                     ......+.+|+.
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~-----~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  122 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGV-----FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFR  122 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEE-----ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEc-----CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHH
Confidence            3788999999999999999874     24567  9999875432110                     011235788999


Q ss_pred             HHHhcCCCCe--eeeeEEEEeCCEEEEEEeccCC-C----chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCEee
Q 023430          168 ILTKVTHPFI--VQLRYSFQTRSKLYLILDFING-G----HLFFHLYRQGIFREDQARFYTAEIVSAVSHLH-KCGIVHR  239 (282)
Q Consensus       168 ~l~~l~h~nI--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH-~~~iiHr  239 (282)
                      +|+.+.|++|  ..+++.    ...+|||||+.+ |    .|.+....   .++..+..++.|++.||.||| ++|||||
T Consensus       123 ~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHr  195 (258)
T 1zth_A          123 NLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHA  195 (258)
T ss_dssp             HHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECS
T ss_pred             HHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence            9999988764  333332    246899999942 3    56554322   234567889999999999999 9999999


Q ss_pred             ccCCCceEEcCCCcEEEEecCcccc
Q 023430          240 DLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       240 DlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ||||+|||++.  .++|+|||+|..
T Consensus       196 Dlkp~NILl~~--~~~liDFG~a~~  218 (258)
T 1zth_A          196 DLSEYNIMYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             SCSTTSEEESS--SEEECCCTTCEE
T ss_pred             CCCHHHEEEcC--cEEEEECccccc
Confidence            99999999988  999999999953

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.83  E-value=1.3e-20  Score=166.16  Aligned_cols=138  Identities=13%  Similarity=0.138  Sum_probs=97.8

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh------------hh---hHH----HHHHHHHHHHHh
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII------------KK---NHV----DYMKAERDILTK  171 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~------------~~---~~~----~~~~~E~~~l~~  171 (282)
                      -|.+...||+|+||.||+|...      .++.||||+++.....            ..   ..+    -+..+|...|.+
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~------~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r  169 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE------KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA  169 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT------TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCEeeeCCceEEEEEECC------CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence            3899999999999999999853      4678999987643210            00   000    112356777777


Q ss_pred             cCCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC
Q 023430          172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       172 l~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~  251 (282)
                      +.+.++....-+....  .+|||||++|+.|..+.      ....+..++.|++.+|.|||++|||||||||.|||++++
T Consensus       170 L~~~gv~vp~p~~~~~--~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          170 LYEEGFPVPEPIAQSR--HTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREE  241 (397)
T ss_dssp             HHHTTCSCCCEEEEET--TEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEE
T ss_pred             HHhcCCCCCeeeeccC--ceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCC
Confidence            7555443221111222  37999999998875432      223456778999999999999999999999999999988


Q ss_pred             C----------cEEEEecCcc
Q 023430          252 G----------HVMAAHSLNS  262 (282)
Q Consensus       252 ~----------~v~l~Dfg~s  262 (282)
                      |          .+.|+||+=+
T Consensus       242 gd~~d~~~~~~~~~iID~~Q~  262 (397)
T 4gyi_A          242 KDAEDPSSITLTPIIIXFPQM  262 (397)
T ss_dssp             ECSSCTTSEEEEEEECCCTTC
T ss_pred             CCcccccccccceEEEEeCCc
Confidence            7          3899999854

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.58  E-value=2.2e-14  Score=120.66  Aligned_cols=139  Identities=11%  Similarity=0.012  Sum_probs=108.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~  188 (282)
                      +.|++...++.|+++.||++..       .++.+++|+........   ...+.+|+.+++.+. +..+.++++++...+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~-------~~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~   83 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVG-------ENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDG   83 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEEC-------SSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred             ccceeEeeccCCCCCeEEEEEC-------CCCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCC
Confidence            4688999999999999999862       24579999986532111   124778999999885 677888999988889


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-----------------------------------  233 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-----------------------------------  233 (282)
                      ..|+||||++|.+|...+     .+......++.+++.+|..||+                                   
T Consensus        84 ~~~lv~e~i~G~~l~~~~-----~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T 3tm0_A           84 WSNLLMSEADGVLCSEEY-----EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEEEEECCSSEEHHHHC-----CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred             ceEEEEEecCCeehhhcc-----CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence            999999999999886642     1222334677899999999998                                   


Q ss_pred             ------------------------CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          234 ------------------------CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       234 ------------------------~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                                              ..++|+|+++.|||+++++.+.|+||+.+.
T Consensus       159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                    348999999999999875556699999874

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.42  E-value=6.4e-13  Score=111.06  Aligned_cols=134  Identities=12%  Similarity=0.095  Sum_probs=95.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC--eeeeeEEEEeC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF--IVQLRYSFQTR  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~  187 (282)
                      ..|.+..+.+.|..+.||++...      .+..+++|+.....      ...+.+|+.+++.+.+.+  +.+++++....
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~------~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~   87 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQ------GRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEA   87 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECT------TSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECS
T ss_pred             CCCceEecccCCCCceEEEEecC------CCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCC
Confidence            35666555456777999998632      34568999875431      123677999998886444  45688888777


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--------------------------------
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG--------------------------------  235 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~--------------------------------  235 (282)
                      +..|+||||++|.+|.  .   ....   ...++.+++..|..||+..                                
T Consensus        88 ~~~~~v~e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (264)
T 1nd4_A           88 GRDWLLLGEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLD  159 (264)
T ss_dssp             SCEEEEEECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCC
T ss_pred             CCCEEEEEecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhh
Confidence            7899999999998873  1   1112   1245566777777777543                                


Q ss_pred             --------------------------CEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          236 --------------------------IVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       236 --------------------------iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                                                ++|+|++|.|||++.++.+.|+||+.+.
T Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          160 EEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             GGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                      9999999999999876656799999875

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.38  E-value=1.5e-12  Score=114.49  Aligned_cols=141  Identities=13%  Similarity=0.212  Sum_probs=102.8

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEee--chhhhhhhHHHHHHHHHHHHHhcC--CCCeeeeeEEEEeC
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMR--KDTIIKKNHVDYMKAERDILTKVT--HPFIVQLRYSFQTR  187 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~  187 (282)
                      ....+.|+.|.++.||++...       +..+++|+..  .....  .....+.+|..+++.+.  +..+.+++.++.+.
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~~-------~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~  110 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVTP-------GQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDE  110 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEECS-------SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCT
T ss_pred             CceEEEcCCcccceEEEEEEC-------CceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC
Confidence            334677899999999998742       3468888775  32211  11234778999999987  34577788877665


Q ss_pred             ---CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------
Q 023430          188 ---SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-------------------------------  233 (282)
Q Consensus       188 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-------------------------------  233 (282)
                         +..|+||||++|..+.+..  ...++..+...++.+++..|..||.                               
T Consensus       111 ~~~g~~~~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (359)
T 3dxp_A          111 SVIGRAFYIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKL  188 (359)
T ss_dssp             TTTSSCEEEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHH
T ss_pred             CccCCeEEEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHh
Confidence               4589999999998764311  2236778888889999999999997                               


Q ss_pred             ---------------------------CCCEeeccCCCceEEcCCCc--EEEEecCccc
Q 023430          234 ---------------------------CGIVHRDLKPENILMDSDGH--VMAAHSLNSH  263 (282)
Q Consensus       234 ---------------------------~~iiHrDlKp~NILl~~~~~--v~l~Dfg~s~  263 (282)
                                                 ..++|+|+++.|||++.++.  +.|+||+.+.
T Consensus       189 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~  247 (359)
T 3dxp_A          189 SETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST  247 (359)
T ss_dssp             HCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred             cCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence                                       35899999999999998764  5899999886

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.93  E-value=1.9e-09  Score=92.37  Aligned_cols=131  Identities=15%  Similarity=0.196  Sum_probs=92.6

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCC--eeeeeEEEEeCC---E
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPF--IVQLRYSFQTRS---K  189 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--Iv~l~~~~~~~~---~  189 (282)
                      +.++.|....||++.          ..+++|+....     .....+.+|..+|+.+. +..  +.+++.......   .
T Consensus        26 ~~~~~G~~n~v~~v~----------~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~   90 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----------RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQM   90 (304)
T ss_dssp             CEEEECSSEEEEEST----------TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSC
T ss_pred             EecCCCCcceEEEEC----------CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCc
Confidence            458999999999742          24888886433     23355888999998874 333  333443332222   3


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK------------------------------------  233 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~------------------------------------  233 (282)
                      .|+|||+++|..|.....  ..++..+...++.+++..|..||+                                    
T Consensus        91 ~~~vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (304)
T 3sg8_A           91 SFAGFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP  168 (304)
T ss_dssp             SCEEEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred             ceEEEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence            589999999988865332  235677777778888888888875                                    


Q ss_pred             ----------------------CCCEeeccCCCceEEcC--CCcEEEEecCccc
Q 023430          234 ----------------------CGIVHRDLKPENILMDS--DGHVMAAHSLNSH  263 (282)
Q Consensus       234 ----------------------~~iiHrDlKp~NILl~~--~~~v~l~Dfg~s~  263 (282)
                                            ..++|+|+++.|||++.  .+.+.++||+.+.
T Consensus       169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~  222 (304)
T 3sg8_A          169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA  222 (304)
T ss_dssp             HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCE
T ss_pred             cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCc
Confidence                                  13799999999999998  4557899999875

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.78  E-value=1.4e-07  Score=80.97  Aligned_cols=132  Identities=14%  Similarity=0.187  Sum_probs=85.1

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCC---CeeeeeEEEE-eCCEE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP---FIVQLRYSFQ-TRSKL  190 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~-~~~~~  190 (282)
                      .+.++.|....||+.          +..+++|+-...     .....+.+|..+|+.+.+.   .|.+.+.+.. ..+..
T Consensus        24 v~~l~~G~~n~v~~v----------g~~~VlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~   88 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----------NGDWVFRFPKSQ-----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNP   88 (306)
T ss_dssp             EEEEEECSSEEEEEE----------TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCE
T ss_pred             eeecCCCcceeEEEE----------CCEEEEEecCCc-----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCce
Confidence            355788999999976          123788874321     2345688999999998752   2445555553 34567


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-------------------------------------  233 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-------------------------------------  233 (282)
                      |+|||+++|..+.....  ..++..+...++.++...|..||+                                     
T Consensus        89 ~~v~e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~  166 (306)
T 3tdw_A           89 FVGYRKVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDE  166 (306)
T ss_dssp             EEEEECCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCH
T ss_pred             EEEEeccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccch
Confidence            89999999987755221  112333333333333333333332                                     


Q ss_pred             -----------------------CCCEeeccCCCceEEcC---CCcE-EEEecCccc
Q 023430          234 -----------------------CGIVHRDLKPENILMDS---DGHV-MAAHSLNSH  263 (282)
Q Consensus       234 -----------------------~~iiHrDlKp~NILl~~---~~~v-~l~Dfg~s~  263 (282)
                                             ..++|+|+++.|||++.   ++.+ .|+||+.+.
T Consensus       167 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          167 SLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             hhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence                                   14699999999999987   4665 799999775

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.76  E-value=2.1e-07  Score=77.95  Aligned_cols=131  Identities=15%  Similarity=0.142  Sum_probs=87.1

Q ss_pred             eCcCCC-eEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEEEEe
Q 023430          118 VGQGAF-GKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       118 lG~G~f-g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      +..|.. ..||+....     ..+..+++|+-....      ...+.+|..+|+.+. +--|.+++.++...+..|+|||
T Consensus        32 ~~~G~S~~~v~rl~~~-----~~~~~~~lk~~~~~~------~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme  100 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGK-----PNAPELFLKHGKGSV------ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT  100 (272)
T ss_dssp             EECSSSSCEEEEEECC-----TTCCCEEEEEEETHH------HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             ccCCCcCCeEEEEEec-----CCCeEEEEEECCCCC------HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence            344544 468876533     234568889765432      334778999998875 3335677888888899999999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK------------------------------------------  233 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~------------------------------------------  233 (282)
                      +++|.++.+.....    ......+..++...|.-||.                                          
T Consensus       101 ~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (272)
T 4gkh_A          101 AIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV  176 (272)
T ss_dssp             CCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred             eeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence            99998776544321    11122334444444444442                                          


Q ss_pred             ---------C-------CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          234 ---------C-------GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       234 ---------~-------~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                               .       .++|+|+.+.|||++.++.+-|+||+.+.
T Consensus       177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                     1       27999999999999987767799998885

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.55  E-value=2.3e-07  Score=82.39  Aligned_cols=80  Identities=15%  Similarity=0.249  Sum_probs=48.6

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhh-hh---hhHHHHHHHHHHHHHhcCC--CC-eeeeeEEEEe
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTI-IK---KNHVDYMKAERDILTKVTH--PF-IVQLRYSFQT  186 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~---~~~~~~~~~E~~~l~~l~h--~n-Iv~l~~~~~~  186 (282)
                      ..+.||.|.++.||++...     ..++.+++|....... ..   ....+++..|.++|+.+..  +. +.+++.+  +
T Consensus        34 ~~~~lg~G~~n~vyrv~~~-----~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d  106 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQ-----EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--D  106 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC---------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--E
T ss_pred             EEEECCCCceEEEEEEEEC-----CCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--c
Confidence            3567999999999998643     1345689997653221 00   0122346678888887742  33 3345543  3


Q ss_pred             CCEEEEEEeccCCC
Q 023430          187 RSKLYLILDFINGG  200 (282)
Q Consensus       187 ~~~~~lv~e~~~~g  200 (282)
                      ....++|||++++.
T Consensus       107 ~~~~~lvmE~l~g~  120 (397)
T 2olc_A          107 TEMAVTVMEDLSHL  120 (397)
T ss_dssp             TTTTEEEECCCTTS
T ss_pred             CCccEEEEEeCCCc
Confidence            44568999999874

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.45  E-value=2.8e-06  Score=73.31  Aligned_cols=30  Identities=13%  Similarity=0.206  Sum_probs=27.4

Q ss_pred             CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          234 CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ..++|+|+++.|||++.++.+.++||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            579999999999999888899999999874

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.45  E-value=1.2e-07  Score=82.78  Aligned_cols=91  Identities=11%  Similarity=0.135  Sum_probs=53.6

Q ss_pred             eEEEeee-CcCCCeEEEEEEEcCCCCCC-CCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-C--CCeeeeeEEEEe
Q 023430          112 FEIFRVV-GQGAFGKVFQVKKKGVDDGD-SDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-H--PFIVQLRYSFQT  186 (282)
Q Consensus       112 y~~~~~l-G~G~fg~V~~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~nIv~l~~~~~~  186 (282)
                      ....+.| +.|....+|+.......++. .+..+++|+..............+.+|..+++.+. +  -.+.+++.+...
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            3445778 88999999987642000000 14568888765432000000123667888888775 2  245667766654


Q ss_pred             C---CEEEEEEeccCCCch
Q 023430          187 R---SKLYLILDFINGGHL  202 (282)
Q Consensus       187 ~---~~~~lv~e~~~~g~L  202 (282)
                      .   +..|+||||++|..+
T Consensus       102 ~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A          102 GDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             STTTSSCEEEEECCCCBCC
T ss_pred             CCccCCceEEEEecCCCCh
Confidence            4   356899999988653

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.26  E-value=6.5e-06  Score=73.59  Aligned_cols=30  Identities=17%  Similarity=0.293  Sum_probs=26.7

Q ss_pred             HCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          233 KCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       233 ~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ...++|+|+++.|||++.++ ++++||+.+.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~  260 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSF  260 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence            45799999999999998776 9999998885

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.17  E-value=2.8e-05  Score=66.71  Aligned_cols=78  Identities=12%  Similarity=0.143  Sum_probs=58.0

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC---CCCeeeeeEEEEeCC
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT---HPFIVQLRYSFQTRS  188 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~  188 (282)
                      ..-.+.|+.|....+|+...       .+..+++|+....      ....+.+|...|+.+.   ...+.+++.+....+
T Consensus        38 i~~~~~l~gG~~n~~y~v~~-------~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g  104 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLIND-------EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG  104 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEES-------SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS
T ss_pred             eeeeEEeCCccceeeeEEEE-------CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC
Confidence            34457789999999998762       2456888986543      2345778988888874   245777888777778


Q ss_pred             EEEEEEeccCCCch
Q 023430          189 KLYLILDFINGGHL  202 (282)
Q Consensus       189 ~~~lv~e~~~~g~L  202 (282)
                      ..|+||||++|..+
T Consensus       105 ~~~lvme~l~G~~~  118 (312)
T 3jr1_A          105 HSFLLLEALNKSKN  118 (312)
T ss_dssp             EEEEEEECCCCCCC
T ss_pred             ceEEEEEeccCCCC
Confidence            89999999998753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.87  E-value=4.3e-05  Score=65.41  Aligned_cols=143  Identities=13%  Similarity=0.135  Sum_probs=78.4

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC--eeeeeE----
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF--IVQLRY----  182 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~----  182 (282)
                      .+...-++.|+.|....+|++...       +..+++|+.....  ..   +.+..|..+++.+...+  +.+++.    
T Consensus        21 ~~~~~~~~~i~~G~~n~~~~v~~~-------~g~~vlk~~~~~~--~~---~~l~~e~~~l~~L~~~g~~vP~~~~~~~g   88 (322)
T 2ppq_A           21 VGSLTSYKGIAEGVENSNFLLHTT-------KDPLILTLYEKRV--EK---NDLPFFLGLMQHLAAKGLSCPLPLPRKDG   88 (322)
T ss_dssp             CCCEEEEEEECC---EEEEEEEES-------SCCEEEEEECC-----C---CHHHHHHHHHHHHHHTTCCCCCBCCBTTC
T ss_pred             CCcceEeeccCCCcccceEEEEeC-------CccEEEEEeCCCC--CH---HHHHHHHHHHHHHHHCCCCCCcccCCCCC
Confidence            344555677888999999988743       2258899876521  11   22455777766654212  223321    


Q ss_pred             --EEEeCCEEEEEEeccCCCchH-----------H---HHHhc-CCC--------CHHHHHH---------------HHH
Q 023430          183 --SFQTRSKLYLILDFINGGHLF-----------F---HLYRQ-GIF--------REDQARF---------------YTA  222 (282)
Q Consensus       183 --~~~~~~~~~lv~e~~~~g~L~-----------~---~l~~~-~~~--------~~~~~~~---------------i~~  222 (282)
                        +....+..+++|+|++|..+.           .   .++.. ..+        ....-..               +..
T Consensus        89 ~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~  168 (322)
T 2ppq_A           89 ELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLRE  168 (322)
T ss_dssp             CSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHH
T ss_pred             CEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHH
Confidence              112346789999999985431           1   11111 001        1000000               001


Q ss_pred             HHHHHHHHHHH-------CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          223 EIVSAVSHLHK-------CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       223 qi~~gL~ylH~-------~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .+...++++..       .+++|+|+.+.|||++.++.+.++||+.+.
T Consensus       169 ~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          169 EIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            13344555552       358999999999999876656799998775

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.84  E-value=6e-05  Score=64.07  Aligned_cols=28  Identities=25%  Similarity=0.154  Sum_probs=24.2

Q ss_pred             CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          235 GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       235 ~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .++|+|+.+.||| ..++.+.++||..+.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            3899999999999 667789999998774

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.81  E-value=0.00021  Score=60.19  Aligned_cols=78  Identities=12%  Similarity=0.072  Sum_probs=52.1

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCC---CeeeeeEEEEeC
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP---FIVQLRYSFQTR  187 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~  187 (282)
                      ...-.+.+|.|..+.||+.+..      +++.|++|+......   .....+.+|...|+.+.-.   -+.++++.  ..
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~------DG~~~~vK~~~~~~~---~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~   84 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELA------DGTPLFVKALPDDAP---ALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD   84 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET------TSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET
T ss_pred             CeEEEEecCCCCCeEEEEEEEC------CCCEEEEEEeCCCCc---chhhHHHHHHHHHHHHHhhCCCCcceEEec--cC
Confidence            4566788999999999998753      456799997654321   1123477899999888522   23344443  22


Q ss_pred             CEEEEEEeccCCCc
Q 023430          188 SKLYLILDFINGGH  201 (282)
Q Consensus       188 ~~~~lv~e~~~~g~  201 (282)
                        -++||||++++.
T Consensus        85 --~~lv~e~l~~~~   96 (288)
T 3f7w_A           85 --RTLAMEWVDERP   96 (288)
T ss_dssp             --TEEEEECCCCCC
T ss_pred             --ceEEEEeecccC
Confidence              378999988764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.58  E-value=0.00018  Score=61.96  Aligned_cols=30  Identities=23%  Similarity=0.325  Sum_probs=26.2

Q ss_pred             CCCEeeccCCCceEEcCC----CcEEEEecCccc
Q 023430          234 CGIVHRDLKPENILMDSD----GHVMAAHSLNSH  263 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~----~~v~l~Dfg~s~  263 (282)
                      ..++|+|+.+.|||++.+    +.+.++||+.+.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            469999999999999875    679999999875

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.55  E-value=0.0003  Score=60.24  Aligned_cols=75  Identities=9%  Similarity=0.184  Sum_probs=44.5

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCC--CeeeeeEE-----EEeCC
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP--FIVQLRYS-----FQTRS  188 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~-----~~~~~  188 (282)
                      ..|+ |....||++...      .++.+++|+......    ....+..|..+++.+...  .+.+++..     ....+
T Consensus        32 ~~l~-g~~n~~y~v~~~------~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g  100 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDE------DRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG  100 (328)
T ss_dssp             EEEC-CSSSEEEEECCT------TCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT
T ss_pred             Eeec-CcccceEEEEcC------CCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC
Confidence            3466 788899986532      234589998864321    123456677777766421  23333332     22356


Q ss_pred             EEEEEEeccCCCc
Q 023430          189 KLYLILDFINGGH  201 (282)
Q Consensus       189 ~~~lv~e~~~~g~  201 (282)
                      ..+++|++++|..
T Consensus       101 ~~~~l~~~i~G~~  113 (328)
T 1zyl_A          101 FYFAVFPSVGGRQ  113 (328)
T ss_dssp             EEEEEEECCCCEE
T ss_pred             EEEEEEEecCCCC
Confidence            7789999998753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.35  E-value=0.00081  Score=60.18  Aligned_cols=79  Identities=14%  Similarity=0.119  Sum_probs=47.7

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCC--CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-eeeeEEEEeCCEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-VQLRYSFQTRSKL  190 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~  190 (282)
                      -++.|+.|....||++.......  ...+..+++|+.....  .   .+.+.+|..+++.+...++ .++++.+.  +  
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~---~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--T---ESHLVAESVIFTLLSERHLGPKLYGIFS--G--  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--C---HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--c---HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--
Confidence            34678889899999987542100  0123568888874311  1   1234468888887753333 45666543  2  


Q ss_pred             EEEEeccCCCc
Q 023430          191 YLILDFINGGH  201 (282)
Q Consensus       191 ~lv~e~~~~g~  201 (282)
                      .+||||++|..
T Consensus       148 g~v~e~l~G~~  158 (429)
T 1nw1_A          148 GRLEEYIPSRP  158 (429)
T ss_dssp             EEEECCCCEEE
T ss_pred             CEEEEEeCCcc
Confidence            38999998643

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.28  E-value=0.00049  Score=60.11  Aligned_cols=79  Identities=14%  Similarity=0.119  Sum_probs=42.0

Q ss_pred             EeeeCcCCCeEEEEEEEcCCC---CCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC-eeeeeEEEEeCCEE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVD---DGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF-IVQLRYSFQTRSKL  190 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~  190 (282)
                      .+.|+.|....+|++......   ....+..+++|+.......    ......|..+++.+...+ +.++++.+  .+  
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----eecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence            456788888999998754200   0001246888876543211    001346777777775333 34565544  22  


Q ss_pred             EEEEeccCCCc
Q 023430          191 YLILDFINGGH  201 (282)
Q Consensus       191 ~lv~e~~~~g~  201 (282)
                      ++||||++|..
T Consensus       110 ~~v~e~i~G~~  120 (369)
T 3c5i_A          110 GRIEEWLYGDP  120 (369)
T ss_dssp             EEEEECCCSEE
T ss_pred             cEEEEEecCCc
Confidence            78999998753

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.23  E-value=0.0021  Score=55.56  Aligned_cols=29  Identities=14%  Similarity=0.260  Sum_probs=26.1

Q ss_pred             CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          235 GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       235 ~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .++|+|+.+.|||++.++.+.++||+.+.
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            58999999999999988889999997664

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.20  E-value=0.00072  Score=59.46  Aligned_cols=145  Identities=16%  Similarity=0.118  Sum_probs=80.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCC--CCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC-eeeeeEEEEe
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGV--DDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF-IVQLRYSFQT  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~  186 (282)
                      +.+++ +.|..|-...+|++.....  .....+..+++|+.....    .....+.+|..+++.+.-.+ ..++++.+..
T Consensus        51 ~~l~v-~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~  125 (379)
T 3feg_A           51 EELRV-YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL----QGVDSLVLESVMFAILAERSLGPQLYGVFPE  125 (379)
T ss_dssp             GGCCC-EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT
T ss_pred             CceEE-EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC
Confidence            34443 4577788888999875310  001123568888753311    11233557888888775222 3456655543


Q ss_pred             CCEEEEEEeccCCCchH--------------HHHH---hcC-----CC--CHHHHHHHHHHHHH----------------
Q 023430          187 RSKLYLILDFINGGHLF--------------FHLY---RQG-----IF--REDQARFYTAEIVS----------------  226 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~--------------~~l~---~~~-----~~--~~~~~~~i~~qi~~----------------  226 (282)
                          .+||||++|..|.              ..+.   ...     ..  -+.++..+..++..                
T Consensus       126 ----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~  201 (379)
T 3feg_A          126 ----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYS  201 (379)
T ss_dssp             ----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTT
T ss_pred             ----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHH
Confidence                2899999985431              1111   111     11  13455555544422                


Q ss_pred             ---HHHHHH----HC----CCEeeccCCCceEEcCC----CcEEEEecCccc
Q 023430          227 ---AVSHLH----KC----GIVHRDLKPENILMDSD----GHVMAAHSLNSH  263 (282)
Q Consensus       227 ---gL~ylH----~~----~iiHrDlKp~NILl~~~----~~v~l~Dfg~s~  263 (282)
                         .+.+|.    ..    .++|+|+.+.|||++.+    +.+.++||..+.
T Consensus       202 l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          202 LKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence               233332    22    48999999999999876    789999998875

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.82  E-value=0.012  Score=52.88  Aligned_cols=75  Identities=17%  Similarity=0.290  Sum_probs=45.6

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-eeeeEEEEeCCEEEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-VQLRYSFQTRSKLYL  192 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~l  192 (282)
                      -++.|+.|-...+|++....     .+..+++|+.....   ....+ ..+|..+++.|...++ .++++.+.  +  .+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~-----~~~~~vLRi~g~~~---~~~id-R~~E~~vl~~L~~~gl~P~ll~~~~--~--G~  178 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMS-----KQAKYLIRLYGPKT---DEIIN-REREKKISCILYNKNIAKKIYVFFT--N--GR  178 (458)
T ss_dssp             EEEEECC--CEEEEEEEETT-----TTEEEEEEEECC-C---CSCSC-HHHHHHHHHHHTTSSSBCCEEEEET--T--EE
T ss_pred             EEEEcCCCeEeEEEEEEECC-----CCceEEEEECCCCh---hhhcC-HHHHHHHHHHHHhcCCCCCEEEEeC--C--eE
Confidence            34568889899999987541     23568888764321   11111 2468888888875545 45666652  3  25


Q ss_pred             EEeccCCCc
Q 023430          193 ILDFINGGH  201 (282)
Q Consensus       193 v~e~~~~g~  201 (282)
                      ||||++|..
T Consensus       179 v~e~I~G~~  187 (458)
T 2qg7_A          179 IEEFMDGYA  187 (458)
T ss_dssp             EEECCCSEE
T ss_pred             EEEeeCCcc
Confidence            999998744

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.11  E-value=0.013  Score=52.27  Aligned_cols=79  Identities=16%  Similarity=0.170  Sum_probs=45.2

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCC--CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCC-eeeeeEEEEeCCEEE
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPF-IVQLRYSFQTRSKLY  191 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~  191 (282)
                      ++.|..|-...+|++.......  ...+..+++|+.....   ....+ ..+|..+++.+...+ ..++++.+  .+  +
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~id-R~~E~~~l~~L~~~gi~P~l~~~~--~~--~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYD-SKVELDVFRYLSNINIAPNIIADF--PE--G  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCC-HHHHHHHHHHHHHTTSSCCEEEEE--TT--E
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcC-HHHHHHHHHHHHhcCCCCCEEEEc--CC--C
Confidence            4567778889999987642100  0014568888864421   11111 245888877775222 34455433  22  7


Q ss_pred             EEEeccCCCc
Q 023430          192 LILDFINGGH  201 (282)
Q Consensus       192 lv~e~~~~g~  201 (282)
                      +||||++|..
T Consensus       147 ~I~efI~G~~  156 (424)
T 3mes_A          147 RIEEFIDGEP  156 (424)
T ss_dssp             EEEECCCSEE
T ss_pred             EEEEEeCCcc
Confidence            8999999865

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=88.65  E-value=0.034  Score=50.13  Aligned_cols=63  Identities=8%  Similarity=0.057  Sum_probs=16.1

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEE------EEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAM------KVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vav------K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      +.+.||   ||.||++.++.     ....||+      |..+... ...+....+.+|..+++.++|+|+++.+++..
T Consensus       146 l~~~lG---fG~v~~g~~~~-----~~~~Vav~~~~~~K~~~~~~-~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYK-----KHMPVLKETHDERDSTGQDG-VSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             STTTSS---BCCC--------------CCBGGGC------------------------------------CBCCCEEE
T ss_pred             ccccCC---chhhhcccccc-----cCCchhhhhccCcccccccc-ccccccccccccccccccccccccCCCcceEE
Confidence            345666   99999998763     1234677      6554322 23344456778899999999999999877654

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=87.42  E-value=1.4  Score=35.10  Aligned_cols=83  Identities=14%  Similarity=0.040  Sum_probs=57.7

Q ss_pred             CCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHHHCCCEeeccCCCceEEcCC
Q 023430          173 THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS-HLHKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       173 ~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~-ylH~~~iiHrDlKp~NILl~~~  251 (282)
                      .||++  -...-.+++.+.+.++.-+++.-+..+.   .++....++++..|+.... ++  ..-+|--|.|+||+++.+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~---~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~  120 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR---KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRA  120 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH---TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTT
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH---hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCC
Confidence            57777  2334467778888887665543344443   3677777777777666544 33  445777788999999999


Q ss_pred             CcEEEEecCcc
Q 023430          252 GHVMAAHSLNS  262 (282)
Q Consensus       252 ~~v~l~Dfg~s  262 (282)
                      +.+++...|+-
T Consensus       121 ~~p~i~hRGi~  131 (219)
T 4ano_A          121 LEPFFLHVGVK  131 (219)
T ss_dssp             CCEEESCCEET
T ss_pred             CcEEEEEcCCc
Confidence            99999988863

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=85.08  E-value=0.34  Score=42.55  Aligned_cols=28  Identities=25%  Similarity=0.306  Sum_probs=24.2

Q ss_pred             CEeeccCCCceEE------cCCCcEEEEecCccc
Q 023430          236 IVHRDLKPENILM------DSDGHVMAAHSLNSH  263 (282)
Q Consensus       236 iiHrDlKp~NILl------~~~~~v~l~Dfg~s~  263 (282)
                      ++|.|+.+.|||+      ++++.+.++||-.|.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            6799999999999      456779999998885

>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A

Probab=84.31  E-value=15  Score=34.01  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=46.5

Q ss_pred             eeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCC-----------------CCHHHHHHHHHHHHH--HHHHHHHCCCEe
Q 023430          178 VQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-----------------FREDQARFYTAEIVS--AVSHLHKCGIVH  238 (282)
Q Consensus       178 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~i~~qi~~--gL~ylH~~~iiH  238 (282)
                      ++.|.+.......- +.|++++.++.+.+.+.+.                 ..+.....+++.++.  -+.|+-.  |  
T Consensus       402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG--i--  476 (614)
T 3ls8_A          402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG--V--  476 (614)
T ss_dssp             CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT--C--
T ss_pred             eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee--c--
Confidence            34455555544444 3467776555544432211                 012223344444433  3445443  3  


Q ss_pred             eccCCCceEEcCCCcEEEEecCccc
Q 023430          239 RDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       239 rDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +|=.++||||+.+|++.=+|||..-
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             cCCCCcceeEcCCCCEeeeehHHhh
Confidence            4777999999999999999999874

>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*

Probab=80.46  E-value=21  Score=33.58  Aligned_cols=25  Identities=16%  Similarity=0.224  Sum_probs=22.8

Q ss_pred             eccCCCceEEcCCCcEEEEecCccc
Q 023430          239 RDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       239 rDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +|=.++||||+.+|++.=+|||.+.
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            5778999999999999999999875

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=80.01  E-value=2  Score=34.14  Aligned_cols=85  Identities=14%  Similarity=0.155  Sum_probs=59.1

Q ss_pred             cCCCCeeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC
Q 023430          172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD  251 (282)
Q Consensus       172 l~h~nIv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~  251 (282)
                      ..||+.+.. ..-.+.+.+.+.++.-+.+.=+..+   ..++....++++.+|+....++  ..-+|--|.|+||+++.+
T Consensus        42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~--~~r~tf~L~P~NL~f~~~  115 (215)
T 4ann_A           42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI---KSFTKNEKLRYLLNIKNLEEVN--RTRYTFVLAPDELFFTRD  115 (215)
T ss_dssp             SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG---GGSCHHHHHHHHHHGGGGGGGG--GSSEECCCSGGGEEECTT
T ss_pred             ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHH---HhcCHHHHHHHHHHHHHHHHHh--cCceEEEEecceEEEcCC
Confidence            358888866 4556667777777765433212223   2367778888888887766444  334677788999999999


Q ss_pred             CcEEEEecCcc
Q 023430          252 GHVMAAHSLNS  262 (282)
Q Consensus       252 ~~v~l~Dfg~s  262 (282)
                      +.+++..-|+-
T Consensus       116 ~~p~i~~RGik  126 (215)
T 4ann_A          116 GLPIAKTRGLQ  126 (215)
T ss_dssp             SCEEESCCEET
T ss_pred             CCEEEEEccCc
Confidence            99999988763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	282
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-47
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-43
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-41
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-41
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-41
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-40
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-40
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-39
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-39
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-38
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-38
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-38
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-38
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-37
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-37
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-37
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-36
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-36
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-36
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-35
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-35
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-35
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-35
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-35
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-35
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-35
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-35
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-34
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-33
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-32
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-32
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-32
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-32
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-32
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-32
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-31
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-31
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-31
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-31
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-31
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-31
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-31
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-31
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-31
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-30
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-30
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-30
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-30
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-30
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-30
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-29
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	7e-29
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-29
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-28
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-28
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-27
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-27
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-26
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-26
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-26
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-26
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-21
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-13

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 1e-47
 Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 5/151 (3%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA 164
           RK  P DF+  +++G+G+F  V   ++       +   YA+K++ K  IIK+N V Y+  
Sbjct: 3   RKKRPEDFKFGKILGEGSFSTVVLAREL-----ATSREYAIKILEKRHIIKENKVPYVTR 57

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           ERD+++++ HPF V+L ++FQ   KLY  L +   G L  ++ + G F E   RFYTAEI
Sbjct: 58  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           VSA+ +LH  GI+HRDLKPENIL++ D H+ 
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQ 148

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 2e-43
 Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFEI R +G+G FG V+  ++K      S  I A+KV+ K  + K      ++ E +I +
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREK-----QSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 61

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            + HP I++L   F   +++YLIL++   G ++  L +   F E +   Y  E+ +A+S+
Sbjct: 62  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 121

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
            H   ++HRD+KPEN+L+ S G +
Sbjct: 122 CHSKRVIHRDIKPENLLLGSAGEL 145

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (361), Expect = 2e-41
 Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DFE    +G G  G VF+V  K      S  + A K++  +  IK    + +  E  +L 
Sbjct: 7   DFEKISELGAGNGGVVFKVSHK-----PSGLVMARKLIHLE--IKPAIRNQIIRELQVLH 59

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +   P+IV    +F +  ++ + ++ ++GG L   L + G   E      +  ++  +++
Sbjct: 60  ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTY 119

Query: 231 LH-KCGIVHRDLKPENILMDSDGHV 254
           L  K  I+HRD+KP NIL++S G +
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEI 144

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  142 bits (358), Expect = 5e-41
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 5/143 (3%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           F   R +G G+FG V+  +        +  + A+K M             +  E   L K
Sbjct: 17  FSDLREIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71

Query: 172 VTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHL 231
           + HP  +Q R  +      +L++++  G         +   +E +    T   +  +++L
Sbjct: 72  LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 131

Query: 232 HKCGIVHRDLKPENILMDSDGHV 254
           H   ++HRD+K  NIL+   G V
Sbjct: 132 HSHNMIHRDVKAGNILLSEPGLV 154

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 5e-41
 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 10/153 (6%)

Query: 104 ERKIGPGD-FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
            R + P D +EI   +G GAFGKV++ + K     ++  + A KV+       +  ++  
Sbjct: 5   TRDLNPEDFWEIIGELGDGAFGKVYKAQNK-----ETSVLAAAKVIDTK---SEEELEDY 56

Query: 163 KAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYT 221
             E DIL    HP IV+L  +F   + L+++++F  GG +   +   +    E Q +   
Sbjct: 57  MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 116

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            + + A+++LH   I+HRDLK  NIL   DG +
Sbjct: 117 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDI 149

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  141 bits (355), Expect = 3e-40
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 8/147 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF + R++G+G FG+V+  +K      D+  +YAMK + K  I  K        ER +L+
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 59

Query: 171 KVT---HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
            V+    PFIV + Y+F T  KL  ILD +NGG L +HL + G+F E   RFY AEI+  
Sbjct: 60  LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 119

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           + H+H   +V+RDLKP NIL+D  GHV
Sbjct: 120 LEHMHNRFVVYRDLKPANILLDEHGHV 146

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 7e-40
 Identities = 36/145 (24%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            D+++ + +G+GA+G+V     +      ++   A+K++     +     + +K E  I 
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDC--PENIKKEICIN 57

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
             + H  +V+     +  +  YL L++ +GG LF  +       E  A+ +  ++++ V 
Sbjct: 58  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 117

Query: 230 HLHKCGIVHRDLKPENILMDSDGHV 254
           +LH  GI HRD+KPEN+L+D   ++
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNL 142

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 5e-39
 Identities = 65/149 (43%), Positives = 101/149 (67%), Gaps = 5/149 (3%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           K+   DF+  +++G+G FGKV  V++K      +   YAMK++RK+ II K+ V +   E
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTE 55

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             +L    HPF+  L+Y+FQT  +L  ++++ NGG LFFHL R+ +F E++ARFY AEIV
Sbjct: 56  SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           SA+ +LH   +V+RD+K EN+++D DGH+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHI 144

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  137 bits (345), Expect = 8e-39
 Identities = 60/174 (34%), Positives = 101/174 (58%), Gaps = 5/174 (2%)

Query: 82  SSLPLQIQELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG 141
            S+   + + + +   + E  S+       F+  + +G G+FG+V  VK K     +S  
Sbjct: 13  ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK-----ESGN 67

Query: 142 IYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH 201
            YAMK++ K  ++K   +++   E+ IL  V  PF+V+L +SF+  S LY++++++ GG 
Sbjct: 68  HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE 127

Query: 202 LFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           +F HL R G F E  ARFY A+IV    +LH   +++RDLKPEN+L+D  G++ 
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 3e-38
 Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 13/164 (7%)

Query: 95  NDAELEAESERKIGPGD----FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRK 150
           +D E+  +    +  GD    +  F  +GQGA G V+           +    A++ M  
Sbjct: 1   SDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDV-----ATGQEVAIRQMNL 55

Query: 151 DTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG 210
               KK  +     E  ++ +  +P IV    S+    +L+++++++ GG L   +    
Sbjct: 56  QQQPKKELI---INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 112

Query: 211 IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              E Q      E + A+  LH   ++HRD+K +NIL+  DG V
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV 155

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  134 bits (338), Expect = 4e-38
 Identities = 57/144 (39%), Positives = 95/144 (65%), Gaps = 5/144 (3%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF+I R +G G+FG+V  ++ +      +   YAMKV++K+ +++   V++   ER +L+
Sbjct: 5   DFQILRTLGTGSFGRVHLIRSR-----HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 59

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
            VTHPFI+++  +FQ   ++++I+D+I GG LF  L +   F    A+FY AE+  A+ +
Sbjct: 60  IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 119

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH   I++RDLKPENIL+D +GH+
Sbjct: 120 LHSKDIIYRDLKPENILLDKNGHI 143

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  134 bits (339), Expect = 5e-38
 Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 9/143 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            ++I   +G GAFG V +V ++      +   +A K +       ++  + ++ E   ++
Sbjct: 27  HYDIHEELGTGAFGVVHRVTER-----ATGNNFAAKFVMTP---HESDKETVRKEIQTMS 78

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVS 229
            + HP +V L  +F+  +++ +I +F++GG LF  +  +     ED+A  Y  ++   + 
Sbjct: 79  VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 138

Query: 230 HLHKCGIVHRDLKPENILMDSDG 252
           H+H+   VH DLKPENI+  +  
Sbjct: 139 HMHENNYVHLDLKPENIMFTTKR 161

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 6e-38
 Identities = 80/180 (44%), Positives = 120/180 (66%), Gaps = 6/180 (3%)

Query: 87  QIQELEHE-NDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAM 145
           Q+  ++HE   A L   +E+ +G  +FE+ +V+G GA+GKVF V+K  +   D+  +YAM
Sbjct: 1   QLLTVKHELRTANLTGHAEK-VGIENFELLKVLGTGAYGKVFLVRK--ISGHDTGKLYAM 57

Query: 146 KVMRKDTIIKK-NHVDYMKAERDILTKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLF 203
           KV++K TI++K    ++ + ER +L  +   PF+V L Y+FQT +KL+LILD+INGG LF
Sbjct: 58  KVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELF 117

Query: 204 FHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH 263
            HL ++  F E + + Y  EIV A+ HLHK GI++RD+K ENIL+DS+GHV+      S 
Sbjct: 118 THLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 177

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 2e-37
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I  G   + + +G G+FG V++ K  G          A+K++       +  +   K E 
Sbjct: 5   IPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQ-QLQAFKNEV 55

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-RQGIFREDQARFYTAEIV 225
            +L K  H  I+     + T  +L ++  +  G  L+ HL+  +  F   +      +  
Sbjct: 56  GVLRKTRHVNILLF-MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 114

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             + +LH   I+HRDLK  NI +  D  V
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFLHEDLTV 143

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 2e-37
 Identities = 52/146 (35%), Positives = 91/146 (62%), Gaps = 6/146 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           DF + +++G+G+FGKVF  + K      ++  +A+K ++KD ++  + V+    E+ +L+
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFK-----KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 57

Query: 171 KV-THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
               HPF+  +  +FQT+  L+ +++++NGG L +H+     F   +A FY AEI+  + 
Sbjct: 58  LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 117

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVM 255
            LH  GIV+RDLK +NIL+D DGH+ 
Sbjct: 118 FLHSKGIVYRDLKLDNILLDKDGHIK 143

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  130 bits (328), Expect = 4e-37
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 12/151 (7%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK------A 164
           ++E   ++G+G    V +   K      +   YA+K++        +  +  +       
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHK-----PTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 58

Query: 165 ERDILTKV-THPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAE 223
           E DIL KV  HP I+QL+ +++T +  +L+ D +  G LF +L  +    E + R     
Sbjct: 59  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 118

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           ++  +  LHK  IVHRDLKPENIL+D D ++
Sbjct: 119 LLEVICALHKLNIVHRDLKPENILLDDDMNI 149

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  131 bits (331), Expect = 1e-36
 Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 9/145 (6%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             ++I   +G GAFG V +  +K      +  ++  K +     + K  V   K E  I+
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEK-----ATGRVFVAKFINTPYPLDKYTV---KNEISIM 80

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVSAV 228
            ++ HP ++ L  +F+ + ++ LIL+F++GG LF  +  +     E +   Y  +    +
Sbjct: 81  NQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 140

Query: 229 SHLHKCGIVHRDLKPENILMDSDGH 253
            H+H+  IVH D+KPENI+ ++   
Sbjct: 141 KHMHEHSIVHLDIKPENIMCETKKA 165

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (324), Expect = 1e-36
 Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +   + ++ + +G+G FG V     +G          A+K ++ D   +        AE 
Sbjct: 4   LNMKELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDATAQA-----FLAEA 51

Query: 167 DILTKVTHPFIVQLR-YSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAE 223
            ++T++ H  +VQL     + +  LY++ +++  G L  +L  +G  +   D    ++ +
Sbjct: 52  SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 111

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH 263
           +  A+ +L     VHRDL   N+L+  D     +    + 
Sbjct: 112 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 151

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  127 bits (321), Expect = 4e-36
 Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 9/150 (6%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             +E+  ++G G   +V   +             A+KV+R D     +     + E    
Sbjct: 7   DRYELGEILGFGGMSEVHLARDL-----RLHRDVAVKVLRADLARDPSFYLRFRREAQNA 61

Query: 170 TKVTHPFIVQLRYSFQTRSK----LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             + HP IV +  + +  +      Y+++++++G  L   ++ +G     +A    A+  
Sbjct: 62  AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 121

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            A++  H+ GI+HRD+KP NI++ +   V 
Sbjct: 122 QALNFSHQNGIIHRDVKPANIMISATNAVK 151

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 1e-35
 Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 4/152 (2%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           IG  D  +   +G G+FG V + +             A+K ++ D + +   +D    E 
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 62

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-RQGIFREDQARFYTAEIV 225
           + +  + H  +++L Y       + ++ +    G L   L   QG F       Y  ++ 
Sbjct: 63  NAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHVMAA 257
             + +L     +HRDL   N+L+ +   V   
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  127 bits (320), Expect = 1e-35
 Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 5/151 (3%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA 164
           ++I     +I +V+G G FG+V     K    G  +   A+K ++      +       +
Sbjct: 21  KEIDISCVKIEQVIGAGEFGEVCSGHLK--LPGKREIFVAIKTLKSGYT--EKQRRDFLS 76

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF-FHLYRQGIFREDQARFYTAE 223
           E  I+ +  HP ++ L       + + +I +F+  G L  F     G F   Q       
Sbjct: 77  EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 136

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           I + + +L     VHRDL   NIL++S+   
Sbjct: 137 IAAGMKYLADMNYVHRDLAARNILVNSNLVC 167

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  126 bits (317), Expect = 3e-35
 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 11/150 (7%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +   D  +   +G G +G+V++   K           A+K +++DT+  +        E 
Sbjct: 14  MERTDITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDTMEVEE----FLKEA 64

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEI 224
            ++ ++ HP +VQL          Y+I +F+  G+L  +L              +   +I
Sbjct: 65  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 124

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            SA+ +L K   +HRDL   N L+  +  V
Sbjct: 125 SSAMEYLEKKNFIHRDLAARNCLVGENHLV 154

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 3e-35
 Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 26/191 (13%)

Query: 89  QELEHENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVM 148
            E  + +  E E + + +    + E  +V+G GAFGKV      G+         A+K++
Sbjct: 16  NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML 75

Query: 149 RKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY 207
           ++      +  + + +E  ++T++  H  IV L  +      +YLI ++   G L  +L 
Sbjct: 76  KEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 133

Query: 208 RQ-----------------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPE 244
            +                        +   +    +  ++   +  L     VHRDL   
Sbjct: 134 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 193

Query: 245 NILMDSDGHVM 255
           N+L+     V 
Sbjct: 194 NVLVTHGKVVK 204

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 3e-35
 Identities = 31/184 (16%), Positives = 67/184 (36%), Gaps = 21/184 (11%)

Query: 93  HENDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDT 152
           + +  +L  + + +         + +G GAFGKV +    G+   D+    A+K+++   
Sbjct: 6   YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA 65

Query: 153 IIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYR--- 208
            +     + + +E  +L+ +  H  IV L  +        +I ++   G L   L R   
Sbjct: 66  HLT--EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 123

Query: 209 ---------------QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
                          +     +    ++ ++   ++ L     +HRDL   NIL+     
Sbjct: 124 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI 183

Query: 254 VMAA 257
               
Sbjct: 184 TKIC 187

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 4e-35
 Identities = 32/155 (20%), Positives = 73/155 (47%), Gaps = 17/155 (10%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+E+   +G G++G+  ++++K         I   K +   ++ +      + +E ++L 
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRK-----SDGKILVWKELDYGSMTEAE-KQMLVSEVNLLR 58

Query: 171 KVTHPFIVQLRYSF--QTRSKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEI 224
           ++ HP IV+       +T + LY+++++  GG L   + +    +    E+       ++
Sbjct: 59  ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 118

Query: 225 VSAVSHLHKCG-----IVHRDLKPENILMDSDGHV 254
             A+   H+       ++HRDLKP N+ +D   +V
Sbjct: 119 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV 153

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 7e-35
 Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 11/153 (7%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I P D    + +G G FG V   K +G          A+K++++ ++ +         E 
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKWRG------QYDVAIKMIKEGSMSEDE----FIEEA 50

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-RQGIFREDQARFYTAEIV 225
            ++  ++H  +VQL      +  +++I +++  G L  +L   +  F+  Q      ++ 
Sbjct: 51  KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 110

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH 258
            A+ +L     +HRDL   N L++  G V  + 
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSD 143

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  125 bits (315), Expect = 9e-35
 Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            ++   V+G GAF +V   + K      +  + A+K + K  +  +     M+ E  +L 
Sbjct: 10  IYDFRDVLGTGAFSEVILAEDK-----RTQKLVAIKCIAKKAL--EGKEGSMENEIAVLH 62

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           K+ HP IV L   +++   LYLI+  ++GG LF  +  +G + E  A     +++ AV +
Sbjct: 63  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 122

Query: 231 LHKCGIVHRDLKPENIL---MDSDGHVM 255
           LH  GIVHRDLKPEN+L   +D D  +M
Sbjct: 123 LHDLGIVHRDLKPENLLYYSLDEDSKIM 150

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 3e-34
 Identities = 30/149 (20%), Positives = 69/149 (46%), Gaps = 11/149 (7%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I P +    + +G G FG V            +    A+K +R+  + +++       E 
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYWL------NKDKVAIKTIREGAMSEED----FIEEA 51

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLF-FHLYRQGIFREDQARFYTAEIV 225
           +++ K++HP +VQL      ++ + L+ +F+  G L  +   ++G+F  +       ++ 
Sbjct: 52  EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 111

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +++L +  ++HRDL   N L+  +  +
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQVI 140

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (305), Expect = 3e-33
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            + I   +G+G FG V +  +       S   Y  K ++     K      +K E  IL 
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVET-----SSKKTYMAKFVKV----KGTDQVLVKKEISILN 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGI-FREDQARFYTAEIVSAVS 229
              H  I+ L  SF++  +L +I +FI+G  +F  +        E +   Y  ++  A+ 
Sbjct: 57  IARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116

Query: 230 HLHKCGIVHRDLKPENILMDSDGH 253
            LH   I H D++PENI+  +   
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRS 140

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 1e-32
 Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 113 EIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA--ERDILT 170
           E    +G+G F  V++ + K     +++ I A+K ++     +        A  E  +L 
Sbjct: 1   EKLDFLGEGQFATVYKARDK-----NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 55

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           +++HP I+ L  +F  +S + L+ DF+             +      + Y    +  + +
Sbjct: 56  ELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 115

Query: 231 LHKCGIVHRDLKPENILMDSDGHV 254
           LH+  I+HRDLKP N+L+D +G +
Sbjct: 116 LHQHWILHRDLKPNNLLLDENGVL 139

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 2e-32
 Identities = 29/149 (19%), Positives = 66/149 (44%), Gaps = 13/149 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           +     ++   +G G FG+V+     G          A+K +++ ++          AE 
Sbjct: 10  VPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDA----FLAEA 59

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFR--EDQARFYTAEI 224
           +++ ++ H  +V+L Y+  T+  +Y+I +++  G L   L      +   ++     A+I
Sbjct: 60  NLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGH 253
              ++ + +   +HRDL+  NIL+     
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLS 147

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  118 bits (297), Expect = 3e-32
 Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 26/168 (15%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           + E  R +G+GAFG+VFQ +  G+   +   + A+K+++++     +     + E  ++ 
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMA 71

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG-------------------- 210
           +  +P IV+L         + L+ +++  G L   L                        
Sbjct: 72  EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 131

Query: 211 ----IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                    +      ++ + +++L +   VHRDL   N L+  +  V
Sbjct: 132 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVV 179

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 5e-32
 Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 8/145 (5%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN---HVDYMKAERD 167
            ++    +G G F  V + ++K      +   YA K ++K            + ++ E  
Sbjct: 11  YYDTGEELGSGQFAVVKKCREK-----STGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 168 ILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
           IL ++ HP ++ L   ++ ++ + LIL+ + GG LF  L  +    E++A  +  +I++ 
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125

Query: 228 VSHLHKCGIVHRDLKPENILMDSDG 252
           V +LH   I H DLKPENI++    
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRN 150

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 5e-32
 Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 21/152 (13%)

Query: 110 GDFEIF-RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
            D+++  +V+G G  GKV Q+  K      +   +A+K+++     ++        E ++
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNK-----RTQEKFALKMLQDCPKARR--------EVEL 57

Query: 169 LTKVT-HPFIVQLRYSFQT----RSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYT 221
             + +  P IV++   ++     R  L ++++ ++GG LF  +  +G   F E +A    
Sbjct: 58  HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 117

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
             I  A+ +LH   I HRD+KPEN+L  S   
Sbjct: 118 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 149

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 6e-32
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 6/149 (4%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I     E+ R +G+G FG V     +G+     +   A+ +         +  +    E 
Sbjct: 4   IQRERIELGRCIGEGQFGDVH----QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 59

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLY-RQGIFREDQARFYTAEIV 225
             + +  HP IV+L     T + +++I++    G L   L  R+          Y  ++ 
Sbjct: 60  LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 118

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHV 254
           +A+++L     VHRD+   N+L+ S+  V
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCV 147

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 1e-31
 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 13/150 (8%)

Query: 107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAER 166
           I      +   +GQG FG+V+     G          A+K ++  T+  +        E 
Sbjct: 14  IPRESLRLEVKLGQGCFGEVWMGTWNG------TTRVAIKTLKPGTMSPEA----FLQEA 63

Query: 167 DILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEI 224
            ++ K+ H  +VQL Y+  +   +Y++ ++++ G L   L  +     R  Q     A+I
Sbjct: 64  QVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 122

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            S ++++ +   VHRDL+  NIL+  +   
Sbjct: 123 ASGMAYVERMNYVHRDLRAANILVGENLVC 152

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 1e-31
 Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
            D E+    G G FG V Q   +           A+KV+++ T  +K   + M  E  I+
Sbjct: 13  ADIEL----GCGNFGSVRQGVYRMRKKQI---DVAIKVLKQGT--EKADTEEMMREAQIM 63

Query: 170 TKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAV 228
            ++ +P+IV+L    Q    L L+++   GG L   L  +              ++   +
Sbjct: 64  HQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 122

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVMAA 257
            +L +   VHRDL   N+L+ +  +   +
Sbjct: 123 KYLEEKNFVHRDLAARNVLLVNRHYAKIS 151

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (290), Expect = 2e-31
 Identities = 25/140 (17%), Positives = 60/140 (42%), Gaps = 5/140 (3%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP 175
           + +G G FG V +   +           A+K+++ +        D + AE +++ ++ +P
Sbjct: 13  KELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNE-ANDPALKDELLAEANVMQQLDNP 68

Query: 176 FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG 235
           +IV++           L+++    G L  +L +    ++        ++   + +L +  
Sbjct: 69  YIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 127

Query: 236 IVHRDLKPENILMDSDGHVM 255
            VHRDL   N+L+ +  +  
Sbjct: 128 FVHRDLAARNVLLVTQHYAK 147

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 2e-31
 Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 3/150 (2%)

Query: 105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKA 164
           R +   +F+  +V+G GAFG V++      +        A+K +R+ T  K N    +  
Sbjct: 4   RILKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKAN--KEILD 60

Query: 165 ERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           E  ++  V +P + +L     T +   +      G  L +    +          +  +I
Sbjct: 61  EAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
              +++L    +VHRDL   N+L+ +  HV
Sbjct: 121 AKGMNYLEDRRLVHRDLAARNVLVKTPQHV 150

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 3e-31
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 11/152 (7%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK---AER 166
             +++  ++G G FG V+   +        +   A+K + KD I     +        E 
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRV-----SDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 58

Query: 167 DILTKVT--HPFIVQLRYSFQTRSKLYLILDFINGGH-LFFHLYRQGIFREDQARFYTAE 223
            +L KV+     +++L   F+      LIL+       LF  +  +G  +E+ AR +  +
Sbjct: 59  VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118

Query: 224 IVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
           ++ AV H H CG++HRD+K ENIL+D +   +
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 150

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 4e-31
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 13/150 (8%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
            +    +G+G+F  V++         ++    A   ++   + K +     K E ++L  
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDT-----ETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKG 64

Query: 172 VTHPFIVQLRYSFQTRSK----LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
           + HP IV+   S+++  K    + L+ + +  G L  +L R  + +    R +  +I+  
Sbjct: 65  LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKG 124

Query: 228 VSHLHKCG--IVHRDLKPENILMDS-DGHV 254
           +  LH     I+HRDLK +NI +    G V
Sbjct: 125 LQFLHTRTPPIIHRDLKCDNIFITGPTGSV 154

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 6e-31
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 21/154 (13%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            +   +V+G G+FG V+Q K       DS  + A+K + +D   K         E  I+ 
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLC-----DSGELVAIKKVLQDKRFKNR-------ELQIMR 68

Query: 171 KVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLY---RQGIFREDQARFYT 221
           K+ H  IV+LRY F +  +      L L+LD++         +    +        + Y 
Sbjct: 69  KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVM 255
            ++  +++++H  GI HRD+KP+N+L+D D  V+
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 162

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 7e-31
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 4/150 (2%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
           +I P      +V+G G FG+V++   K    G  +   A+K ++      +        E
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKT-SSGKKEVPVAIKTLKAG--YTEKQRVDFLGE 59

Query: 166 RDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGG-HLFFHLYRQGIFREDQARFYTAEI 224
             I+ + +H  I++L         + +I +++  G    F   + G F   Q       I
Sbjct: 60  AGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI 119

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
            + + +L     VHRDL   NIL++S+   
Sbjct: 120 AAGMKYLANMNYVHRDLAARNILVNSNLVC 149

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 7e-31
 Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 14/153 (9%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             +E    +GQG FG+VF+ + +      +    A+K +  +   +   +  ++ E  IL
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHR-----KTGQKVALKKVLMENEKEGFPITALR-EIKIL 63

Query: 170 TKVTHPFIVQLRYSFQTRS--------KLYLILDFINGGHLFFHLYRQGIFREDQARFYT 221
             + H  +V L    +T++         +YL+ DF               F   + +   
Sbjct: 64  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 123

Query: 222 AEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
             +++ + ++H+  I+HRD+K  N+L+  DG +
Sbjct: 124 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVL 156

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 1e-30
 Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 12/170 (7%)

Query: 95  NDAELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII 154
           + A++    E ++      + R +GQG+FG V++   KGV   + +   A+K + +   +
Sbjct: 5   SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 64

Query: 155 KKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFR- 213
           +         E  ++ +     +V+L           +I++ +  G L  +L        
Sbjct: 65  R--ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 122

Query: 214 ---------EDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                      +      EI   +++L+    VHRDL   N ++  D  V
Sbjct: 123 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 172

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (282), Expect = 2e-30
 Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            +E    +G+G +G VF+ K +     ++  I A+K +R D    +        E  +L 
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDD-DEGVPSSALREICLLK 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ H  IV+L     +  KL L+ +F +     +     G    +  + +  +++  +  
Sbjct: 57  ELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116

Query: 231 LHKCGIVHRDLKPENILMDSDGH 253
            H   ++HRDLKP+N+L++ +G 
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGE 139

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  113 bits (282), Expect = 3e-30
 Identities = 29/145 (20%), Positives = 68/145 (46%), Gaps = 7/145 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
            +     +G+G +G V++ +            +A+K +R +    +        E  IL 
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN------YGETFALKKIRLEKE-DEGIPSTTIREISILK 55

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSH 230
           ++ H  IV+L     T+ +L L+ + ++          +G      A+ +  ++++ +++
Sbjct: 56  ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115

Query: 231 LHKCGIVHRDLKPENILMDSDGHVM 255
            H   ++HRDLKP+N+L++ +G + 
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELK 140

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 4e-30
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 22/166 (13%)

Query: 106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE 165
            +   D +   V+G+G FG+V + + K              + R      K+       E
Sbjct: 6   VLDWNDIKFQDVIGEGNFGQVLKARIK-----KDGLRMDAAIKRMKEYASKDDHRDFAGE 60

Query: 166 RDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQ--------------- 209
            ++L K+  HP I+ L  + + R  LYL +++   G+L   L +                
Sbjct: 61  LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 120

Query: 210 -GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                  Q   + A++   + +L +   +HRDL   NIL+  +   
Sbjct: 121 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 166

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 5e-30
 Identities = 31/175 (17%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 98  ELEAESERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDG--IYAMKVMRKDTIIK 155
           EL  +   ++      + + +G+GAFG+V   +  G+D    +     A+K+++ D    
Sbjct: 1   ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-- 58

Query: 156 KNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQG---- 210
           +  +  + +E +++  +  H  I+ L  +      LY+I+++ + G+L  +L  +     
Sbjct: 59  EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 118

Query: 211 ------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
                                   ++   + +L     +HRDL   N+L+  D  
Sbjct: 119 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 173

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 7e-30
 Identities = 37/148 (25%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           +F+    +G+G +G V++ + K      +  + A+K +R DT  +      ++ E  +L 
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTETEGVPSTAIR-EISLLK 56

Query: 171 KVTHPFIVQLRYSFQTRSKLYLILDFIN-GGHLFFHLYRQGIFREDQARFYTAEIVSAVS 229
           ++ HP IV+L     T +KLYL+ +F++     F              + Y  +++  ++
Sbjct: 57  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116

Query: 230 HLHKCGIVHRDLKPENILMDSDGHVMAA 257
             H   ++HRDLKP+N+L++++G +  A
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLA 144

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 5e-29
 Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 18/169 (10%)

Query: 103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYM 162
           S+ +      ++ + +G+GAFG+V +    G+D   +    A+K++++       H   M
Sbjct: 6   SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALM 64

Query: 163 KAERDILTKVTHPFIVQLR-YSFQTRSKLYLILDFINGGHLFFHLYRQG----------- 210
              + ++    H  +V L     +    L +I++F   G+L  +L  +            
Sbjct: 65  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 124

Query: 211 -----IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                    +    Y+ ++   +  L     +HRDL   NIL+     V
Sbjct: 125 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVV 173

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  109 bits (273), Expect = 7e-29
 Identities = 25/156 (16%), Positives = 56/156 (35%), Gaps = 12/156 (7%)

Query: 104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK 163
           E ++G   + + R +G G+FG ++           +    A+K+        K     + 
Sbjct: 2   ELRVG-NRYRLGRKIGSGSFGDIYLGTDI-----AAGEEVAIKLECV-----KTKHPQLH 50

Query: 164 AERDILTKVTHP-FIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
            E  I   +     I  +R+         ++++ +         +    F          
Sbjct: 51  IESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLAD 110

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAH 258
           +++S + ++H    +HRD+KP+N LM         +
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVY 146

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 9e-29
 Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 12/174 (6%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMK--AERDI 168
            +E    +G+GA+GKVF    K  D  +     A+K +R  T  +   +  ++  A    
Sbjct: 8   QYECVAEIGEGAYGKVF----KARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63

Query: 169 LTKVTHPFIVQLRYSFQT-----RSKLYLILDFINGGHL-FFHLYRQGIFREDQARFYTA 222
           L    HP +V+L            +KL L+ + ++     +     +     +  +    
Sbjct: 64  LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 123

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFFFFLFLG 276
           +++  +  LH   +VHRDLKP+NIL+ S G +  A    +            + 
Sbjct: 124 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 177

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 3e-28
 Identities = 26/146 (17%), Positives = 57/146 (39%), Gaps = 10/146 (6%)

Query: 112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK 171
           +     +G+GA+G V            +    A+K +       + +      E  IL +
Sbjct: 10  YTNLSYIGEGAYGMVCSAYDN-----VNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 62

Query: 172 VTHPFIVQLRYSFQTRS---KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
             H  I+ +    +  +      + L     G   + L +      D   ++  +I+  +
Sbjct: 63  FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 122

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHV 254
            ++H   ++HRDLKP N+L+++   +
Sbjct: 123 KYIHSANVLHRDLKPSNLLLNTTCDL 148

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 3e-28
 Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 10/149 (6%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
              +   + VG GA+G V         DG +    A+K + +     +        E  +
Sbjct: 17  RAVYRDLQPVGSGAYGAVCSAV-----DGRTGAKVAIKKLYRP-FQSELFAKRAYRELRL 70

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFI----NGGHLFFHLYRQGIFREDQARFYTAEI 224
           L  + H  ++ L   F     L    DF       G     L +     ED+ +F   ++
Sbjct: 71  LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQM 130

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGH 253
           +  + ++H  GI+HRDLKP N+ ++ D  
Sbjct: 131 LKGLRYIHAAGIIHRDLKPGNLAVNEDCE 159

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  106 bits (264), Expect = 3e-27
 Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 17/147 (11%)

Query: 111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT 170
           D+++ R +G+G + +VF+          ++    +K      I+K      +K E  IL 
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINI-----TNNEKVVVK------ILKPVKKKKIKREIKILE 84

Query: 171 KV-THPFIVQLRYSFQTRSK--LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSA 227
            +   P I+ L    +        L+ + +N               +   RFY  EI+ A
Sbjct: 85  NLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKA 141

Query: 228 VSHLHKCGIVHRDLKPENILMDSDGHV 254
           + + H  GI+HRD+KP N+++D +   
Sbjct: 142 LDYCHSMGIMHRDVKPHNVMIDHEHRK 168

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (264), Expect = 3e-27
 Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 10/149 (6%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
           P  ++    VG GA+G V            +    A+K + +       H      E  +
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRP-FQSIIHAKRTYRELRL 70

Query: 169 LTKVTHPFIVQLRYSFQTRSKL----YLILDFINGGHLFFHLYRQGIFREDQARFYTAEI 224
           L  + H  ++ L   F     L     + L     G    ++ +     +D  +F   +I
Sbjct: 71  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130

Query: 225 VSAVSHLHKCGIVHRDLKPENILMDSDGH 253
           +  + ++H   I+HRDLKP N+ ++ D  
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCE 159

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  102 bits (254), Expect = 3e-26
 Identities = 26/162 (16%), Positives = 60/162 (37%), Gaps = 11/162 (6%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
             +++ R +G+G+FG +F+          ++   A+K   + +   +     ++ E    
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNL-----LNNQQVAIKFEPRRSDAPQ-----LRDEYRTY 54

Query: 170 TKVTH-PFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAV 228
             +     I  + Y  Q      L++D +              F          ++++ V
Sbjct: 55  KLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 114

Query: 229 SHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCCFF 270
             +H+  +V+RD+KP+N L+       A         +  F+
Sbjct: 115 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 4e-26
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 8/169 (4%)

Query: 90  ELEHENDAELEAESERKIGPGDFEIF--RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKV 147
           +L   N   ++A     IGP    +    V+G+G FG V+      +D+       A+K 
Sbjct: 5   DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY--HGTLLDNDGKKIHCAVKS 62

Query: 148 MRKDTIIKKNHVDYMKAERDILTKVTHPFIVQL-RYSFQTRSKLYLILDFINGGHLF-FH 205
           + + T      V     E  I+   +HP ++ L     ++     ++L ++  G L  F 
Sbjct: 63  LNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 120

Query: 206 LYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHV 254
                         +  ++   +  L     VHRDL   N ++D    V
Sbjct: 121 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 169

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 5e-26
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 24/157 (15%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDIL 169
               +   +G+G FG+V++ K +G          A+K+       ++    + +AE    
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWRGE-------EVAVKIFSS----REERSWFREAEIYQT 51

Query: 170 TKVTHPFIVQLRYSFQ----TRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIV 225
             + H  I+    +      T ++L+L+ D+   G LF +L R  +  E   +       
Sbjct: 52  VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLA-LSTA 110

Query: 226 SAVSHLH--------KCGIVHRDLKPENILMDSDGHV 254
           S ++HLH        K  I HRDLK +NIL+  +G  
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 147

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 5e-26
 Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 15/151 (9%)

Query: 109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI 168
              ++  + +G GA G V             D   A+K + +     + H      E  +
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRP-FQNQTHAKRAYRELVL 69

Query: 169 LTKVTHPFIVQLRYSFQTRSK------LYLILDFINGGHLFFHLYRQGIFREDQARFYTA 222
           +  V H  I+ L   F  +        +YL+++ ++                ++  +   
Sbjct: 70  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 126

Query: 223 EIVSAVSHLHKCGIVHRDLKPENILMDSDGH 253
           +++  + HLH  GI+HRDLKP NI++ SD  
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 157

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 88.9 bits (219), Expect = 6e-21
 Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 18/157 (11%)

Query: 110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDI- 168
             + + R +G G F  V+  K        ++   AMK++R D +  +   D +K  + + 
Sbjct: 13  ARYILVRKLGWGHFSTVWLAKDM-----VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVN 67

Query: 169 ------LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGH-----LFFHLYRQGIFREDQA 217
                    +    I++L   F  +    + +  +              Y          
Sbjct: 68  DADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV 127

Query: 218 RFYTAEIVSAVSHLH-KCGIVHRDLKPENILMDSDGH 253
           +  + +++  + ++H +CGI+H D+KPEN+LM+    
Sbjct: 128 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 164

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 65.2 bits (158), Expect = 2e-13
 Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 22/151 (14%)

Query: 116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDY-------MKAERDI 168
           +++G+G    VF    +        G   +K  +      K   +               
Sbjct: 6   KLMGEGKESAVFNCYSE------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIR 59

Query: 169 LTKVTHPFIVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFR---EDQARFYTAEIV 225
             +     + +L+     +   +       G  +   L           +        I+
Sbjct: 60  SARNEFRALQKLQGLAVPKVYAW------EGNAVLMELIDAKELYRVRVENPDEVLDMIL 113

Query: 226 SAVSHLHKCGIVHRDLKPENILMDSDGHVMA 256
             V+  +  GIVH DL   N+L+  +G  + 
Sbjct: 114 EEVAKFYHRGIVHGDLSQYNVLVSEEGIWII 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	282
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.94
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.79
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.32
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.26
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.54
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.11
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.01

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-45  Score=309.96  Aligned_cols=170  Identities=30%  Similarity=0.451  Sum_probs=154.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++++.||+|+||+||+|+++     .+++.||+|++.+.........+.+.+|+.+|+.++|||||++++++.+
T Consensus         3 ~~l~dy~i~~~iG~G~fg~Vy~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~   77 (263)
T d2j4za1           3 WALEDFEIGRPLGKGKFGNVYLAREK-----QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD   77 (263)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             cchhHeEEEEEEecCCCcEEEEEEEC-----CCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEE
Confidence            34578999999999999999999987     4567899999987765555666778999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ++.+|+|||||++|+|.+++.+.+.+++.+++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|....
T Consensus        78 ~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~  157 (263)
T d2j4za1          78 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  157 (263)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCC
T ss_pred             CCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecC
Confidence            99999999999999999999988899999999999999999999999999999999999999999999999999996432


Q ss_pred             cc-----hhheeeccCcccc
Q 023430          267 CC-----FFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~~-----~~~~~~~ape~~~  281 (282)
                      ..     .||+.|||||++.
T Consensus       158 ~~~~~~~~Gt~~Y~APE~~~  177 (263)
T d2j4za1         158 SSRRTTLCGTLDYLPPEMIE  177 (263)
T ss_dssp             CCCCEETTEEGGGCCHHHHT
T ss_pred             CCcccccCCCCcccCHHHHc
Confidence            22     6899999999874

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=309.14  Aligned_cols=170  Identities=36%  Similarity=0.627  Sum_probs=153.6

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ..+++|++++.||+|+||+||+|+++     .+++.||||++.+.........+.+.+|+++|+.++||||+++++++.+
T Consensus         5 ~~p~dy~i~~~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~   79 (288)
T d1uu3a_           5 KRPEDFKFGKILGEGSFSTVVLAREL-----ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD   79 (288)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEEC
T ss_pred             CCCCCCEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEE
Confidence            34578999999999999999999987     4567899999987765556667789999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ++.+|+|||||+||+|.+++...+.+++.+++.++.|++.||.|||++|||||||||+|||++.+|.+||+|||+|+...
T Consensus        80 ~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  159 (288)
T d1uu3a_          80 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  159 (288)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecc
Confidence            99999999999999999999988899999999999999999999999999999999999999999999999999996321


Q ss_pred             ---------cchhheeeccCcccc
Q 023430          267 ---------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ---------~~~~~~~~~ape~~~  281 (282)
                               ...||+.|||||+++
T Consensus       160 ~~~~~~~~~~~~GT~~Y~APE~~~  183 (288)
T d1uu3a_         160 PESKQARANSFVGTAQYVSPELLT  183 (288)
T ss_dssp             ----------CCCCGGGCCHHHHH
T ss_pred             cCCcccccccccCCccccCceeec
Confidence                     115899999999873

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-45  Score=308.33  Aligned_cols=165  Identities=22%  Similarity=0.329  Sum_probs=145.2

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|+++++||+|+||+||+|+++     .+++.||||++.....  ....+.+.+|+.+|++++|||||++++++.+++
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~   76 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGN   76 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECC---------CHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             CcceEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCc
Confidence            468999999999999999999987     4567899999976532  223456889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .+|||||||++|+|.+++...+.+++.+++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+...  
T Consensus        77 ~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~  156 (271)
T d1nvra_          77 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  156 (271)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             eeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccC
Confidence            999999999999999999877889999999999999999999999999999999999999999999999999996321  


Q ss_pred             -------cchhheeeccCccc
Q 023430          267 -------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -------~~~~~~~~~ape~~  280 (282)
                             ...||+.|||||++
T Consensus       157 ~~~~~~~~~~GT~~Y~APE~~  177 (271)
T d1nvra_         157 NRERLLNKMCGTLPYVAPELL  177 (271)
T ss_dssp             TEECCBCCCCSCGGGSCTHHH
T ss_pred             CccccccceeeCcCccCHhHh
Confidence                   11589999999987

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-44  Score=311.92  Aligned_cols=170  Identities=39%  Similarity=0.705  Sum_probs=155.3

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|++++.||+|+||.||+|+++     .+++.||||++.+.........+.+.+|+.+|+.++||||++++++|.+
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~-----~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~   76 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT   76 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecc
Confidence            45678999999999999999999987     4678899999988766566667788899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      .+.+|+|||||+||+|..++.+.+.+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+...
T Consensus        77 ~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~  156 (337)
T d1o6la_          77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             ccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccc
Confidence            99999999999999999999998999999999999999999999999999999999999999999999999999997432


Q ss_pred             c-------chhheeeccCcccc
Q 023430          267 C-------CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~-------~~~~~~~~ape~~~  281 (282)
                      .       ..||+.|||||++.
T Consensus       157 ~~~~~~~~~~GT~~Y~aPE~~~  178 (337)
T d1o6la_         157 SDGATMKTFCGTPEYLAPEVLE  178 (337)
T ss_dssp             CTTCCBCCCEECGGGCCGGGGS
T ss_pred             cCCcccccceeCHHHhhhhhcc
Confidence            2       16799999999974

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.4e-44  Score=307.19  Aligned_cols=165  Identities=20%  Similarity=0.270  Sum_probs=150.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKL  190 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  190 (282)
                      .|++++.||+|+||+||+|+++     .++..||||++...........+.+.+|+.+|+.++|||||++++++.+.+.+
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~   90 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA   90 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             hcEeeEEEecCCCeEEEEEEEC-----CCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEE
Confidence            4999999999999999999987     45778999999876655556667789999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc---
Q 023430          191 YLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC---  267 (282)
Q Consensus       191 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~---  267 (282)
                      |+|||||.+|+|..++...+.+++.+++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|.....   
T Consensus        91 ~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~  170 (309)
T d1u5ra_          91 WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS  170 (309)
T ss_dssp             EEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred             EEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCc
Confidence            99999999999987777778899999999999999999999999999999999999999999999999999974332   


Q ss_pred             chhheeeccCccc
Q 023430          268 CFFFFLFLGGGVF  280 (282)
Q Consensus       268 ~~~~~~~~ape~~  280 (282)
                      ..||+.|||||++
T Consensus       171 ~~GT~~Y~APE~~  183 (309)
T d1u5ra_         171 FVGTPYWMAPEVI  183 (309)
T ss_dssp             CCSCGGGCCHHHH
T ss_pred             cccCccccCHHHH
Confidence            2789999999986

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-43  Score=305.33  Aligned_cols=168  Identities=35%  Similarity=0.601  Sum_probs=153.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||+||+|+++     .+++.||||++++.........+.+.+|+.+|+.++|||||++++++.+.+
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~-----~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   77 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSR-----HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ   77 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS
T ss_pred             hhHeEEEEEEecCcCcEEEEEEEC-----CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCC
Confidence            468999999999999999999987     457789999998776555666778999999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .+|+|||||+||+|..++.....+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.... 
T Consensus        78 ~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          78 QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             eeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            9999999999999999999888899999999999999999999999999999999999999999999999999964222 


Q ss_pred             ---chhheeeccCcccc
Q 023430          268 ---CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ---~~~~~~~~ape~~~  281 (282)
                         ..||+.|||||++.
T Consensus       158 ~~~~~Gt~~Y~APE~l~  174 (316)
T d1fota_         158 TYTLCGTPDYIAPEVVS  174 (316)
T ss_dssp             BCCCCSCTTTCCHHHHT
T ss_pred             cccccCcccccCHHHHc
Confidence               26899999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-44  Score=309.62  Aligned_cols=167  Identities=23%  Similarity=0.338  Sum_probs=149.5

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +..++|+++++||+|+||+||+|+++     .++..||+|+++...  .....+.+.+|+.+|+.++|||||+++++|.+
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~   75 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHK-----PSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS   75 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEET-----TTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            34578999999999999999999987     467889999997653  23445678899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      .+.+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||+ +|||||||||+|||++.+|.+||+|||+|...
T Consensus        76 ~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~  155 (322)
T d1s9ja_          76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  155 (322)
T ss_dssp             SSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             CCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCcccc
Confidence            99999999999999999999988889999999999999999999997 59999999999999999999999999999732


Q ss_pred             cc-----chhheeeccCccc
Q 023430          266 LC-----CFFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~-----~~~~~~~~ape~~  280 (282)
                      ..     -.||+.|||||++
T Consensus       156 ~~~~~~~~~GT~~Y~APEvl  175 (322)
T d1s9ja_         156 IDSMANSFVGTRSYMSPERL  175 (322)
T ss_dssp             HHHTC---CCSSCCCCHHHH
T ss_pred             CCCccccccCCccccCchHH
Confidence            21     2689999999987

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-43  Score=300.99  Aligned_cols=164  Identities=21%  Similarity=0.307  Sum_probs=145.6

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||+||+|+++     .+++.||||++.....   ...+.+.+|+.+|+.++|||||++++++.+.+
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~-----~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   90 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGD   90 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBT-----TTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccccEEEEEEecCcCcEEEEEEEC-----CCCCEEEEEEEecccC---hHHHHHHHHHHHHHhCCCCCEeeEeEEEEECC
Confidence            357999999999999999999976     4577899999976542   23466889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      .+|||||||+||+|..++.+ +.+++.+++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+...  
T Consensus        91 ~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~  169 (293)
T d1yhwa1          91 ELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (293)
T ss_dssp             EEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccc
Confidence            99999999999999987765 569999999999999999999999999999999999999999999999999996321  


Q ss_pred             -----cchhheeeccCcccc
Q 023430          267 -----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -----~~~~~~~~~ape~~~  281 (282)
                           ...||+.|||||++.
T Consensus       170 ~~~~~~~~gt~~Y~aPE~~~  189 (293)
T d1yhwa1         170 QSKRSTMVGTPYWMAPEVVT  189 (293)
T ss_dssp             TCCBCCCCSCGGGCCHHHHS
T ss_pred             cccccccccCCCccChhhhc
Confidence                 125899999999874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6e-43  Score=306.08  Aligned_cols=170  Identities=34%  Similarity=0.599  Sum_probs=154.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      ...++|++++.||+|+||.||+|+++     .+++.||||++.+.........+.+.+|+.+|+.++|||||++++++..
T Consensus        38 ~~ld~y~i~~~lG~G~fg~Vy~a~~~-----~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~  112 (350)
T d1rdqe_          38 AQLDQFDRIKTLGTGSFGRVMLVKHK-----ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD  112 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             CCccCeEEEEEeecCcCcEEEEEEEC-----CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccc
Confidence            34578999999999999999999987     4577899999987765555667778899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      ...+++||||+.+|+|..++.+.+.+++.+++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+...
T Consensus       113 ~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             ccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecc
Confidence            99999999999999999999988899999999999999999999999999999999999999999999999999996422


Q ss_pred             ----cchhheeeccCcccc
Q 023430          267 ----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ----~~~~~~~~~ape~~~  281 (282)
                          ...||+.|||||++.
T Consensus       193 ~~~~~~~Gt~~Y~APE~~~  211 (350)
T d1rdqe_         193 GRTWTLCGTPEALAPEIIL  211 (350)
T ss_dssp             SCBCCCEECGGGCCHHHHT
T ss_pred             cccccccCccccCCHHHHc
Confidence                226899999999873

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-43  Score=300.39  Aligned_cols=163  Identities=28%  Similarity=0.431  Sum_probs=145.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      +.|++++.||+|+||.||+|+++     .++..||||++....   ....+.+.+|+++|+.++|||||++++++.+.+.
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~   83 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNK-----ETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENN   83 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEEC-----CCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCe
Confidence            46999999999999999999987     456789999997643   2334567889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          190 LYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      +|+|||||++|+|.+++.+ .+.+++.+++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|....  
T Consensus        84 ~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~  163 (288)
T d2jfla1          84 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT  163 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC
Confidence            9999999999999998765 4569999999999999999999999999999999999999999999999999996322  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...||+.|||||++
T Consensus       164 ~~~~~~~~Gt~~y~APE~l  182 (288)
T d2jfla1         164 IQRRDSFIGTPYWMAPEVV  182 (288)
T ss_dssp             HHHHTCCCSCCTTCCHHHH
T ss_pred             cccccccccccccCCHHHH
Confidence                 22679999999987

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-42  Score=290.81  Aligned_cols=164  Identities=21%  Similarity=0.324  Sum_probs=143.1

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe----C
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT----R  187 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~  187 (282)
                      |++.++||+|+||+||+|+++     .++..||+|++..... .....+.+.+|+++|++++|||||++++++..    .
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~-----~~~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   84 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDT-----ETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK   84 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred             EEeeeEEecCcCcEEEEEEEC-----CCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccC
Confidence            467788999999999999987     3567899999876543 33456678999999999999999999999875    3


Q ss_pred             CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeeccCCCceEEc-CCCcEEEEecCcccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCG--IVHRDLKPENILMD-SDGHVMAAHSLNSHN  264 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~NILl~-~~~~v~l~Dfg~s~~  264 (282)
                      ..+|+|||||++|+|.+++.+.+.+++..++.++.||+.||+|||+++  ||||||||+|||++ .++.+||+|||+|+.
T Consensus        85 ~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_          85 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             CEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence            468999999999999999998888999999999999999999999998  99999999999996 578999999999964


Q ss_pred             cccc-----hhheeeccCcccc
Q 023430          265 QLCC-----FFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~~-----~~~~~~~ape~~~  281 (282)
                      ...+     .||+.|||||.++
T Consensus       165 ~~~~~~~~~~GT~~Y~aPE~~~  186 (270)
T d1t4ha_         165 KRASFAKAVIGTPEFMAPEMYE  186 (270)
T ss_dssp             CCTTSBEESCSSCCCCCGGGGG
T ss_pred             ccCCccCCcccCccccCHHHhC
Confidence            2222     6899999999874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.1e-43  Score=297.52  Aligned_cols=167  Identities=23%  Similarity=0.274  Sum_probs=147.5

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      |++..++|++.+.||+|+||+||+|+++     .++..||||+++.+.    ...+.+.+|+.+|+.++|||||++++++
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~HpnIv~~~~~~   82 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVC   82 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEG-----GGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEEC-----CCCeEEEEEEECCcc----chHHHHHHHHHHHHhCCCCCEecCCccE
Confidence            5566779999999999999999999987     356789999987643    2345688999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                      .+.+.+|+|||||++|+|..++...  ..+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||+|
T Consensus        83 ~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a  162 (287)
T d1opja_          83 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS  162 (287)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCT
T ss_pred             eeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccce
Confidence            9999999999999999999998764  45899999999999999999999999999999999999999999999999999


Q ss_pred             cccccc--------hhheeeccCccc
Q 023430          263 HNQLCC--------FFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~~--------~~~~~~~ape~~  280 (282)
                      +....+        .|++.|||||++
T Consensus       163 ~~~~~~~~~~~~~~~g~~~y~aPE~~  188 (287)
T d1opja_         163 RLMTGDTYTAHAGAKFPIKWTAPESL  188 (287)
T ss_dssp             TTCCSSSSEEETTEEECGGGCCHHHH
T ss_pred             eecCCCCceeeccccccccccChHHH
Confidence            642211        457889999986

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-42  Score=298.71  Aligned_cols=165  Identities=30%  Similarity=0.471  Sum_probs=135.0

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      +.|++.++||+|+||+||+|+++     .+++.||||++.+....  ...+.+.+|+.+|+.++|||||++++++.+++.
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~   81 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDK-----RTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKIKHPNIVALDDIYESGGH   81 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEET-----TTCCEEEEEEEEC------------CHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEeeccCeEEEEEEEC-----CCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            56999999999999999999987     45678999999865432  223557889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc---CCCcEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD---SDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~---~~~~v~l~Dfg~s~~~~  266 (282)
                      +|||||||+||+|.+++...+.+++.++..++.||+.||.|||++|||||||||+|||+.   .++.+||+|||+|+...
T Consensus        82 ~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          82 LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred             EEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence            999999999999999999888899999999999999999999999999999999999995   57899999999996322


Q ss_pred             c------chhheeeccCcccc
Q 023430          267 C------CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~------~~~~~~~~ape~~~  281 (282)
                      .      ..||+.|||||++.
T Consensus       162 ~~~~~~~~~GT~~y~APE~~~  182 (307)
T d1a06a_         162 PGSVLSTACGTPGYVAPEVLA  182 (307)
T ss_dssp             -----------CTTSCHHHHT
T ss_pred             CCCeeeeeeeCccccCcHHHc
Confidence            1      16899999999873

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=293.77  Aligned_cols=166  Identities=19%  Similarity=0.381  Sum_probs=137.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--C
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--R  187 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~  187 (282)
                      ++|++++.||+|+||+||+|+++     .+++.||||++..... .+...+.+.+|+++|+.++|||||++++++.+  .
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   77 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRK-----SDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN   77 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC---
T ss_pred             hhCEEeEEEecCCCeEEEEEEEC-----CCCCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCC
Confidence            57999999999999999999987     4567899999977653 34456778899999999999999999999864  4


Q ss_pred             CEEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-----CEeeccCCCceEEcCCCcEEEEe
Q 023430          188 SKLYLILDFINGGHLFFHLYR----QGIFREDQARFYTAEIVSAVSHLHKCG-----IVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~gL~ylH~~~-----iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                      +.+|||||||++|+|.+++.+    .+.+++..++.++.|++.||.|||+++     ||||||||+|||++.+|.+||+|
T Consensus        78 ~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~D  157 (269)
T d2java1          78 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD  157 (269)
T ss_dssp             -CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECC
T ss_pred             CEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEee
Confidence            568999999999999998864    356999999999999999999999876     99999999999999999999999


Q ss_pred             cCcccccc-------cchhheeeccCcccc
Q 023430          259 SLNSHNQL-------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       259 fg~s~~~~-------~~~~~~~~~ape~~~  281 (282)
                      ||+|+...       ...||+.|||||+++
T Consensus       158 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~  187 (269)
T d2java1         158 FGLARILNHDTSFAKAFVGTPYYMSPEQMN  187 (269)
T ss_dssp             HHHHHHC-----------CCCSCCCHHHHT
T ss_pred             ccceeecccCCCccccCCCCcccCCHHHHc
Confidence            99996321       126799999999874

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.1e-42  Score=301.64  Aligned_cols=169  Identities=36%  Similarity=0.623  Sum_probs=147.1

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHH---HHHHHhcCCCCeeeeeEEE
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAE---RDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E---~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..++|+++++||+|+||.||+|+++     .+++.||||++.+...........+.+|   +.+++.++|||||++++++
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~~~-----~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~   76 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF   76 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE
T ss_pred             CHHhCeeeeEEecCCCeEEEEEEEC-----CCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEE
Confidence            3578999999999999999999987     4577899999987654433333334444   6677778899999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+.+.+|+|||||+||+|..++.+...+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.
T Consensus        77 ~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~  156 (364)
T d1omwa3          77 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD  156 (364)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred             EECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeee
Confidence            99999999999999999999999888999999999999999999999999999999999999999999999999999963


Q ss_pred             cc-----cchhheeeccCcccc
Q 023430          265 QL-----CCFFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~-----~~~~~~~~~ape~~~  281 (282)
                      ..     ...||+.|||||++.
T Consensus       157 ~~~~~~~~~~GT~~y~APE~~~  178 (364)
T d1omwa3         157 FSKKKPHASVGTHGYMAPEVLQ  178 (364)
T ss_dssp             CSSSCCCSCCSCGGGCCHHHHS
T ss_pred             cCCCcccccccccccchhHHhh
Confidence            22     226899999999873

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-42  Score=293.47  Aligned_cols=167  Identities=22%  Similarity=0.272  Sum_probs=144.5

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      |++..++|++.++||+|+||+||+|+++        ..||||+++.... .....+.+.+|+.+|++++|||||++++++
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~   73 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWH--------GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYS   73 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESS--------SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEEC--------CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeeeEEE
Confidence            5677889999999999999999999854        2499999976543 345567899999999999999999999986


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      . .+.+++|||||++|+|.+++... ..+++..+..++.||+.||.|||+++||||||||+||||+.++.+||+|||+|+
T Consensus        74 ~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~  152 (276)
T d1uwha_          74 T-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT  152 (276)
T ss_dssp             C-SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSC
T ss_pred             e-ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEcccccee
Confidence            5 45689999999999999999764 559999999999999999999999999999999999999999999999999995


Q ss_pred             cccc---------chhheeeccCcccc
Q 023430          264 NQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~---------~~~~~~~~ape~~~  281 (282)
                      ....         ..||+.|||||+|.
T Consensus       153 ~~~~~~~~~~~~~~~gt~~y~APE~l~  179 (276)
T d1uwha_         153 VKSRWSGSHQFEQLSGSILWMAPEVIR  179 (276)
T ss_dssp             C------------CCCCGGGCCHHHHT
T ss_pred             eccccCCcccccccccCcccCCHHHHh
Confidence            3211         15799999999874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-41  Score=291.70  Aligned_cols=167  Identities=25%  Similarity=0.378  Sum_probs=147.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh---hhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK---KNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +.|++++.||+|+||+||+|+++     .+++.||||++.+.....   ....+.+.+|+.+|+.++|||||++++++.+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~   84 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREK-----STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN   84 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             cCEEEeEEEecCCCeEEEEEEEC-----CCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            47999999999999999999987     457789999997654322   2235678899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC----cEEEEecCcc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG----HVMAAHSLNS  262 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~----~v~l~Dfg~s  262 (282)
                      .+.+|||||||++|+|.+++...+.+++..++.++.|++.||.|||+++||||||||+|||++.++    .+|++|||+|
T Consensus        85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence            999999999999999999998888899999999999999999999999999999999999998876    4999999998


Q ss_pred             cccc------cchhheeeccCcccc
Q 023430          263 HNQL------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       263 ~~~~------~~~~~~~~~ape~~~  281 (282)
                      ....      ...|++.|||||+++
T Consensus       165 ~~~~~~~~~~~~~~t~~y~APE~~~  189 (293)
T d1jksa_         165 HKIDFGNEFKNIFGTPEFVAPEIVN  189 (293)
T ss_dssp             EECTTSCBCSCCCCCGGGCCHHHHT
T ss_pred             hhcCCCccccccCCCCcccCHHHHc
Confidence            5321      226799999999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-42  Score=296.62  Aligned_cols=175  Identities=19%  Similarity=0.294  Sum_probs=147.4

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRY  182 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~  182 (282)
                      .|.+..++|++.++||+|+||+||+|++++.........||+|++....  .....+.+.+|+.+|+++ +|||||++++
T Consensus        31 kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~  108 (325)
T d1rjba_          31 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLG  108 (325)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEE
Confidence            4567778999999999999999999998876544455679999886543  223345688899999998 8999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEee
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQG-----------------------IFREDQARFYTAEIVSAVSHLHKCGIVHR  239 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHr  239 (282)
                      ++.+.+.+|+|||||++|+|.+++....                       .+++..++.++.|++.||.|||+++||||
T Consensus       109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHR  188 (325)
T d1rjba_         109 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR  188 (325)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             EEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            9999999999999999999999997542                       47889999999999999999999999999


Q ss_pred             ccCCCceEEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          240 DLKPENILMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       240 DlKp~NILl~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      ||||+|||++.++.+||+|||+|+.....         .||+.|||||++
T Consensus       189 DlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l  238 (325)
T d1rjba_         189 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL  238 (325)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH
T ss_pred             cCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHH
Confidence            99999999999999999999999642221         458899999986

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-41  Score=292.48  Aligned_cols=167  Identities=32%  Similarity=0.619  Sum_probs=148.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHH-hcCCCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILT-KVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~~~  188 (282)
                      ++|+++++||+|+||+||+|+++     .+++.||||++++.........+.+..|+.++. .++|||||++++++.+++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~-----~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFK-----KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEEC-----CCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC
Confidence            68999999999999999999987     467889999998766545555566666777665 689999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc-
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC-  267 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~-  267 (282)
                      .+|||||||++|+|.+++.....+++.+++.++.||+.||.|||++|||||||||+|||++.+|++||+|||+++.... 
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  156 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             ceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccc
Confidence            9999999999999999999888999999999999999999999999999999999999999999999999999963221 


Q ss_pred             ------chhheeeccCcccc
Q 023430          268 ------CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ------~~~~~~~~ape~~~  281 (282)
                            ..||+.|||||++.
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~  176 (320)
T d1xjda_         157 DAKTNTFCGTPDYIAPEILL  176 (320)
T ss_dssp             TCCBCCCCSCGGGCCHHHHT
T ss_pred             cccccccCCCCCcCCHHHHc
Confidence                  26799999999873

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.4e-41  Score=297.23  Aligned_cols=165  Identities=24%  Similarity=0.395  Sum_probs=145.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||.||+|+++     .++..||||++.....   ...+.+.+|+.+|+.++|||||++++++.+++
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~-----~~g~~vAvK~i~~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   96 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTER-----ATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN   96 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET-----TTTEEEEEEEECCCSH---HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETT
T ss_pred             ccCeEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEcccch---hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            358999999999999999999987     4678899999976532   33466889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC--CCcEEEEecCccccc
Q 023430          189 KLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS--DGHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~--~~~v~l~Dfg~s~~~  265 (282)
                      .+|||||||+||+|.+++.+ .+.+++.+++.++.||+.||.|||++|||||||||+|||++.  +|.+||+|||+|+..
T Consensus        97 ~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~  176 (350)
T d1koaa2          97 EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  176 (350)
T ss_dssp             EEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEEC
T ss_pred             EEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheec
Confidence            99999999999999998854 456999999999999999999999999999999999999964  588999999999632


Q ss_pred             c------cchhheeeccCcccc
Q 023430          266 L------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~------~~~~~~~~~ape~~~  281 (282)
                      -      ...||+.|||||++.
T Consensus       177 ~~~~~~~~~~gT~~Y~aPEv~~  198 (350)
T d1koaa2         177 DPKQSVKVTTGTAEFAAPEVAE  198 (350)
T ss_dssp             CTTSCEEEECSCTTTCCHHHHH
T ss_pred             ccccccceecCcccccCHHHHc
Confidence            1      136799999999873

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.4e-41  Score=297.37  Aligned_cols=164  Identities=24%  Similarity=0.396  Sum_probs=144.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|++++.||+|+||.||+|+++     .+++.||||++.....   ...+.+.+|+.+|+.++|||||+++++|.+++.
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~  100 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEK-----ATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE  100 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEECCcch---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            57999999999999999999987     4577899999876542   223567889999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEc--CCCcEEEEecCcccccc
Q 023430          190 LYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMD--SDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~--~~~~v~l~Dfg~s~~~~  266 (282)
                      +|||||||+||+|.+++...+ .+++.+++.++.||+.||.|||++|||||||||+||||+  .++.+||+|||+|....
T Consensus       101 ~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~  180 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  180 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecC
Confidence            999999999999988876544 599999999999999999999999999999999999998  57899999999996422


Q ss_pred             c------chhheeeccCcccc
Q 023430          267 C------CFFFFLFLGGGVFN  281 (282)
Q Consensus       267 ~------~~~~~~~~ape~~~  281 (282)
                      .      ..|++.|||||++.
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~  201 (352)
T d1koba_         181 PDEIVKVTTATAEFAAPEIVD  201 (352)
T ss_dssp             TTSCEEEECSSGGGCCHHHHT
T ss_pred             CCCceeeccCcccccCHHHHc
Confidence            1      26799999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-41  Score=291.90  Aligned_cols=173  Identities=21%  Similarity=0.228  Sum_probs=141.8

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      ..+..++|++.++||+|+||+||+|+++.++  .....||||.+....  .....+.+.+|+.+|++++|||||++++++
T Consensus        21 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~--~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~   96 (299)
T d1jpaa_          21 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPG--KREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNVIHLEGVV   96 (299)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hhhChhhcEEeeEEeeCCCeEEEEEEEeCCC--CEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            3466778999999999999999999987432  234568999886543  234456789999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      ...+.+|+|||||++|+|.+++... +.+++.+++.++.||+.||.|||+++||||||||+||||+.++.+||+|||+|+
T Consensus        97 ~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~  176 (299)
T d1jpaa_          97 TKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSR  176 (299)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             eeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccce
Confidence            9999999999999999999988764 468999999999999999999999999999999999999999999999999996


Q ss_pred             cccc------------chhheeeccCcccc
Q 023430          264 NQLC------------CFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~------------~~~~~~~~ape~~~  281 (282)
                      ....            ..|++.|||||.+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  206 (299)
T d1jpaa_         177 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQ  206 (299)
T ss_dssp             -------------------CGGGSCHHHHH
T ss_pred             EccCCCCcceeeecccccCCccccCHHHHh
Confidence            3211            13578899999863

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=286.92  Aligned_cols=165  Identities=22%  Similarity=0.340  Sum_probs=139.6

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +.+++|++++.||+|+||.||+|+++      ++..||||+++....    ..+.+.+|+.++++++|||||++++++..
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~   71 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWL------NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLE   71 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEET------TTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEEC------CCCEEEEEEECCCcC----cHHHHHHHHHHHHhcCCCCcccccceecc
Confidence            35678999999999999999999876      345799999976432    23458899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                      ++.+|+|||||++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+..
T Consensus        72 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~  151 (263)
T d1sm2a_          72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV  151 (263)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----
T ss_pred             CCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheec
Confidence            99999999999999999988765 45889999999999999999999999999999999999999999999999999632


Q ss_pred             c--------cchhheeeccCcccc
Q 023430          266 L--------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~--------~~~~~~~~~ape~~~  281 (282)
                      .        ...|++.|||||++.
T Consensus       152 ~~~~~~~~~~~~gt~~y~aPE~l~  175 (263)
T d1sm2a_         152 LDDQYTSSTGTKFPVKWASPEVFS  175 (263)
T ss_dssp             -------------CTTSCCHHHHT
T ss_pred             cCCCceeecceecCcccCChHHhc
Confidence            2        125688999999874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=5.6e-41  Score=284.50  Aligned_cols=167  Identities=28%  Similarity=0.366  Sum_probs=148.3

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh------hhHHHHHHHHHHHHHhcC-CCCeeeee
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK------KNHVDYMKAERDILTKVT-HPFIVQLR  181 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~~E~~~l~~l~-h~nIv~l~  181 (282)
                      .++|++.+.||+|+||+||+|+++     .+++.||||++.+.....      +...+.+.+|+.+|++++ ||||++++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~   76 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHK-----PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLK   76 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             cccCEEceEEecCcCeEEEEEEEC-----CCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            368999999999999999999976     467889999997654221      223456788999999997 99999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +++.+++.+|||||||++|+|.+++..++.+++.+++.++.||+.||.|||++|||||||||+|||++.++.+||+|||+
T Consensus        77 ~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~  156 (277)
T d1phka_          77 DTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF  156 (277)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             eecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchh
Confidence            99999999999999999999999999888999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc------cchhheeeccCccc
Q 023430          262 SHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~------~~~~~~~~~ape~~  280 (282)
                      +....      ...||+.|+|||.+
T Consensus       157 a~~~~~~~~~~~~~gt~~y~~PE~~  181 (277)
T d1phka_         157 SCQLDPGEKLREVCGTPSYLAPEII  181 (277)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred             eeEccCCCceeeeeccCCCCCHHHh
Confidence            96321      12679999999976

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.4e-41  Score=285.49  Aligned_cols=168  Identities=20%  Similarity=0.258  Sum_probs=146.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++.+.||+|+||+||+|+++     .+++.||||++++....+....+.+.+|+.+|+.++||||+++++++...+
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~   80 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDL-----RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC
T ss_pred             cceeEEeEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc
Confidence            357999999999999999999987     467889999998776555666778999999999999999999999987654


Q ss_pred             ----EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          189 ----KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       189 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                          .+|||||||+|++|..++...+.+++.+++.++.||+.||.|||++|||||||||+|||++.++.++++|||.+..
T Consensus        81 ~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~  160 (277)
T d1o6ya_          81 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA  160 (277)
T ss_dssp             SSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred             CCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhh
Confidence                4899999999999999998888999999999999999999999999999999999999999999999999998753


Q ss_pred             cccc----------hhheeeccCcccc
Q 023430          265 QLCC----------FFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~~----------~~~~~~~ape~~~  281 (282)
                      ....          .||+.|||||++.
T Consensus       161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~  187 (277)
T d1o6ya_         161 IADSGNSVTQTAAVIGTAQYLSPEQAR  187 (277)
T ss_dssp             CC----------------TTCCHHHHT
T ss_pred             hccccccccccccccCcccccCHHHHc
Confidence            2111          5799999999873

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-41  Score=284.50  Aligned_cols=173  Identities=20%  Similarity=0.218  Sum_probs=144.2

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      ++.++.|++.++||+|+||.||+|.++.... .....||||++....  .......+.+|+.+|+.++|||||++++++.
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~   79 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSG-KKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS   79 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCC-EEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe
Confidence            4567789999999999999999999875432 234579999986543  2334456889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      ..+.+++|||||.++++.+++... ..+++.++..++.|++.||.|||+++||||||||+||||+.++.+||+|||+|+.
T Consensus        80 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          80 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  159 (283)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             cCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhc
Confidence            999999999999999998877654 5699999999999999999999999999999999999999999999999999963


Q ss_pred             ccc----------chhheeeccCcccc
Q 023430          265 QLC----------CFFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~----------~~~~~~~~ape~~~  281 (282)
                      ...          ..||+.|||||.++
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~  186 (283)
T d1mqba_         160 LEDDPEATYTTSGGKIPIRWTAPEAIS  186 (283)
T ss_dssp             --------------CCCGGGSCHHHHH
T ss_pred             ccCCCccceEeccCCCCccccCHHHHc
Confidence            211          13588999999873

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-41  Score=283.88  Aligned_cols=161  Identities=17%  Similarity=0.215  Sum_probs=137.1

Q ss_pred             eeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Q 023430          116 RVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLYLILD  195 (282)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e  195 (282)
                      ++||+|+||.||+|.++..   ..++.||||+++... ......+.+.+|+.+|++++|||||++++++.. +..+||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~---~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE   87 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMK---KVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVME   87 (277)
T ss_dssp             EEEEECSSEEEEEEEEECS---SSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred             CCcccCCCeEEEEEEEccC---CcCeEEEEEEEChhh-CCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEE
Confidence            4699999999999987632   356789999997654 234455678999999999999999999999865 45789999


Q ss_pred             ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc---------
Q 023430          196 FINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL---------  266 (282)
Q Consensus       196 ~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~---------  266 (282)
                      ||++|+|.+++.....+++..++.++.||+.||.|||+++||||||||+|||++.++.+||+|||+|+...         
T Consensus        88 ~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~  167 (277)
T d1xbba_          88 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  167 (277)
T ss_dssp             CCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred             cCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence            99999999999988889999999999999999999999999999999999999999999999999996321         


Q ss_pred             -cchhheeeccCcccc
Q 023430          267 -CCFFFFLFLGGGVFN  281 (282)
Q Consensus       267 -~~~~~~~~~ape~~~  281 (282)
                       ...|++.|||||.+.
T Consensus       168 ~~~~gt~~y~APE~l~  183 (277)
T d1xbba_         168 THGKWPVKWYAPECIN  183 (277)
T ss_dssp             ---CCCGGGCCHHHHH
T ss_pred             cccCCCceecCchhhc
Confidence             114688999999873

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-41  Score=285.85  Aligned_cols=168  Identities=18%  Similarity=0.271  Sum_probs=143.0

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeE
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRY  182 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~  182 (282)
                      ..|.+..++|++.+.||+|+||.||+|+++      .+..||||+++....    ..+.+.+|+.+|++++|||||++++
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g   75 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYYN------GHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYA   75 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEET------TTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEEC------CCCEEEEEEEccCcC----CHHHHHHHHHHHHhCCCCCEeEEEe
Confidence            345677789999999999999999999975      346799999975432    2356889999999999999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          183 SFQTRSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       183 ~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                      ++.. +.+|+|||||++|+|.+++...  ..+++.+++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||
T Consensus        76 ~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFG  154 (272)
T d1qpca_          76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG  154 (272)
T ss_dssp             EECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             eecc-CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeecccc
Confidence            8754 5689999999999998876433  358999999999999999999999999999999999999999999999999


Q ss_pred             cccccc--------cchhheeeccCcccc
Q 023430          261 NSHNQL--------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       261 ~s~~~~--------~~~~~~~~~ape~~~  281 (282)
                      +|+...        ...|++.|||||.+.
T Consensus       155 la~~~~~~~~~~~~~~~gt~~y~APE~~~  183 (272)
T d1qpca_         155 LARLIEDNEYTAREGAKFPIKWTAPEAIN  183 (272)
T ss_dssp             TCEECSSSCEECCTTCCCCTTTSCHHHHH
T ss_pred             ceEEccCCccccccccCCcccccChHHHh
Confidence            996321        125688999999863

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-40  Score=286.10  Aligned_cols=164  Identities=23%  Similarity=0.337  Sum_probs=144.5

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||+||+|.++     .+++.||||+++....    ....+.+|+.+|+.++|||||+++++|.+.+
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~-----~~~~~~AiK~i~~~~~----~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~   74 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVET-----SSKKTYMAKFVKVKGT----DQVLVKKEISILNIARHRNILHLHESFESME   74 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECCCTH----HHHHHHHHHHHHHHSCCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEEcCCcc----cHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            468999999999999999999987     4577899999976532    2345788999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCC--CcEEEEecCccccc
Q 023430          189 KLYLILDFINGGHLFFHLYRQG-IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSD--GHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~--~~v~l~Dfg~s~~~  265 (282)
                      .+|||||||+||+|.+++...+ .+++.+++.++.||+.||.|||++||+||||||+|||++.+  +.+||+|||++...
T Consensus        75 ~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~  154 (321)
T d1tkia_          75 ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcc
Confidence            9999999999999999997654 69999999999999999999999999999999999999854  58999999999643


Q ss_pred             ccc------hhheeeccCcccc
Q 023430          266 LCC------FFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~~~------~~~~~~~ape~~~  281 (282)
                      ...      .+++.|||||.+.
T Consensus       155 ~~~~~~~~~~~t~~y~ape~~~  176 (321)
T d1tkia_         155 KPGDNFRLLFTAPEYYAPEVHQ  176 (321)
T ss_dssp             CTTCEEEEEESCGGGSCHHHHT
T ss_pred             ccCCcccccccccccccchhcc
Confidence            222      6799999999863

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-40  Score=282.84  Aligned_cols=169  Identities=21%  Similarity=0.256  Sum_probs=141.8

Q ss_pred             cCCCCeEEEee-eCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEE
Q 023430          107 IGPGDFEIFRV-VGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQ  185 (282)
Q Consensus       107 ~~~~~y~~~~~-lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~  185 (282)
                      +..++|.+.+. ||+|+||.||+|.++..   ..+..||||+++...  .....+.+.+|+.+|++++|||||++++++.
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~---~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~   79 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMR---KKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ   79 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC------CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             ecccCeEECCcEEecccCeEEEEEEEecC---CCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhCCCCCEeeEeeeec
Confidence            34467888885 99999999999987643   234579999997543  3445667899999999999999999999986


Q ss_pred             eCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          186 TRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      . +.+|||||||++|+|.+++... +.+++.++..++.||+.||.|||+++||||||||+|||++.++.+||+|||+|+.
T Consensus        80 ~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~  158 (285)
T d1u59a_          80 A-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKA  158 (285)
T ss_dssp             S-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             c-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhc
Confidence            5 4689999999999999987653 5699999999999999999999999999999999999999999999999999963


Q ss_pred             cc----------cchhheeeccCcccc
Q 023430          265 QL----------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~----------~~~~~~~~~ape~~~  281 (282)
                      ..          ...|++.|||||++.
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~  185 (285)
T d1u59a_         159 LGADDSYYTARSAGKWPLKWYAPECIN  185 (285)
T ss_dssp             CTTCSCEECCCCSSCCCGGGCCHHHHH
T ss_pred             ccccccccccccccccCccccChHHHh
Confidence            21          114688999999863

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-40  Score=282.42  Aligned_cols=175  Identities=18%  Similarity=0.278  Sum_probs=139.1

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRY  182 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~  182 (282)
                      .|.+..++|++.++||+|+||.||+|+++......+++.||||+++....  ....+.+.+|..++.++ +|+||+.+++
T Consensus         7 ~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~~~~e~~~l~~~~~h~~iv~~~~   84 (299)
T d1ywna1           7 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLG   84 (299)
T ss_dssp             HHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C--HHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--cHHHHHHHHHHHHHHhhcCCCeEEEeee
Confidence            45566789999999999999999999998776666778899999875432  23345566777777776 5899999998


Q ss_pred             EEEeC-CEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCc
Q 023430          183 SFQTR-SKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPEN  245 (282)
Q Consensus       183 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  245 (282)
                      ++... ..+++|||||++|+|.+++...                ..+++.+++.++.||+.||.|||+++||||||||+|
T Consensus        85 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~N  164 (299)
T d1ywna1          85 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  164 (299)
T ss_dssp             EECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccc
Confidence            87654 4689999999999999998653                247899999999999999999999999999999999


Q ss_pred             eEEcCCCcEEEEecCcccccc---------cchhheeeccCccc
Q 023430          246 ILMDSDGHVMAAHSLNSHNQL---------CCFFFFLFLGGGVF  280 (282)
Q Consensus       246 ILl~~~~~v~l~Dfg~s~~~~---------~~~~~~~~~ape~~  280 (282)
                      |||+.++.+||+|||+|+...         ...||+.|||||++
T Consensus       165 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l  208 (299)
T d1ywna1         165 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  208 (299)
T ss_dssp             EEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHH
T ss_pred             eeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHh
Confidence            999999999999999996311         11578999999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.6e-40  Score=281.85  Aligned_cols=175  Identities=19%  Similarity=0.255  Sum_probs=151.5

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      .++..++|++.+.||+|+||+||+|++++.....++..||||++....  .....+.+.+|+.+|+.++||||+++++++
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            455667899999999999999999999876666677889999987543  334456789999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeec
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQG------------------------IFREDQARFYTAEIVSAVSHLHKCGIVHRD  240 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~------------------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrD  240 (282)
                      ...+..+++|||+++|+|.+++....                        .+++..++.++.|++.||+|||+++|||||
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            99999999999999999999986432                        378889999999999999999999999999


Q ss_pred             cCCCceEEcCCCcEEEEecCccccccc---------chhheeeccCcccc
Q 023430          241 LKPENILMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVFN  281 (282)
Q Consensus       241 lKp~NILl~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~~  281 (282)
                      |||+|||++.++.+||+|||+|+....         ..|++.|||||.++
T Consensus       166 lKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~  215 (301)
T d1lufa_         166 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF  215 (301)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred             EcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHc
Confidence            999999999999999999999963211         14578899999863

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-40  Score=276.02  Aligned_cols=163  Identities=22%  Similarity=0.309  Sum_probs=143.5

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      .+++|+++++||+|+||+||+|+++      .+..||||++++....    .+.+.+|+.+++.++||||+++++++.+.
T Consensus         2 ~~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~----~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~   71 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFGVVKYGKWR------GQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQ   71 (258)
T ss_dssp             CCCCCCCCCCCCEETTEEEEEEEET------TTEEEEEEEEESSSSC----HHHHHHHHHHHHTCCCTTBCCEEEEECCS
T ss_pred             ChHHCEEeEEEecCCCeEEEEEEEC------CCCEEEEEEECcCcCC----HHHHHHHHHHHHhcCCCceeeEEEEEeeC
Confidence            4678999999999999999999975      3567999999865432    34588999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                      +.+++||||+++|+|..++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        72 ~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~  151 (258)
T d1k2pa_          72 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  151 (258)
T ss_dssp             SSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCS
T ss_pred             CceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheecc
Confidence            999999999999999888765 4568999999999999999999999999999999999999999999999999995311


Q ss_pred             --------cchhheeeccCccc
Q 023430          267 --------CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 --------~~~~~~~~~ape~~  280 (282)
                              ...|++.|||||.+
T Consensus       152 ~~~~~~~~~~~~t~~y~aPE~~  173 (258)
T d1k2pa_         152 DDEYTSSVGSKFPVRWSPPEVL  173 (258)
T ss_dssp             SSSCCCCCCSCCCGGGCCHHHH
T ss_pred             CCCceeecccCCCCCcCCcHHh
Confidence                    12568899999986

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=284.72  Aligned_cols=163  Identities=21%  Similarity=0.321  Sum_probs=136.7

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh--hhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK--KNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSKLY  191 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  191 (282)
                      .+++||+|+||+||+|+++     .+++.||||+++......  ....+.+.+|+.+|+.++|||||++++++..++.+|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDK-----NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECS-----SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             cceEeccCcCeEEEEEEEC-----CCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCcee
Confidence            4689999999999999976     457789999997654321  112345789999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc----
Q 023430          192 LILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC----  267 (282)
Q Consensus       192 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~----  267 (282)
                      |||||+.++.+..+......+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.....    
T Consensus        77 ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~  156 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA  156 (299)
T ss_dssp             EEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred             ehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence            9999999988776666567799999999999999999999999999999999999999999999999999964222    


Q ss_pred             ---chhheeeccCcccc
Q 023430          268 ---CFFFFLFLGGGVFN  281 (282)
Q Consensus       268 ---~~~~~~~~ape~~~  281 (282)
                         ..||+.|||||++.
T Consensus       157 ~~~~~gt~~y~aPE~~~  173 (299)
T d1ua2a_         157 YTHQVVTRWYRAPELLF  173 (299)
T ss_dssp             CCCSCCCCTTCCHHHHT
T ss_pred             ccceecChhhccHHHHc
Confidence               15799999999863

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-40  Score=276.70  Aligned_cols=172  Identities=20%  Similarity=0.231  Sum_probs=139.1

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      |++..++|++.+.||+|+||.||+|++....  ..+..||||.++...  .....+.+.+|+.+|+.++|||||++++++
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~--~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~   77 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPE--NPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVI   77 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC----CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCC--ceeEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            4566789999999999999999999987432  345568899886432  344456788999999999999999999998


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      . .+.+|+||||+++|+|..++... ..+++..++.++.||+.||.|||+++||||||||+|||++.++.+||+|||+|+
T Consensus        78 ~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~  156 (273)
T d1mp8a_          78 T-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  156 (273)
T ss_dssp             C-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             e-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhhe
Confidence            5 56789999999999999887654 568999999999999999999999999999999999999999999999999996


Q ss_pred             ccc--------cchhheeeccCcccc
Q 023430          264 NQL--------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~--------~~~~~~~~~ape~~~  281 (282)
                      ...        ...|++.|||||.++
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~apE~l~  182 (273)
T d1mp8a_         157 YMEDSTYYKASKGKLPIKWMAPESIN  182 (273)
T ss_dssp             --------------CCGGGCCHHHHH
T ss_pred             eccCCcceeccceecCcccchhhHhc
Confidence            321        114588999999874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=279.69  Aligned_cols=165  Identities=22%  Similarity=0.362  Sum_probs=138.7

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|+++++||+|+||+||+|+++     .+++.||||+++.... .....+.+.+|+.+|+.++|||||++++++.+.+.
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~   75 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK   75 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCCEeccEEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEEeccccccccc
Confidence            68999999999999999999987     4567899999976542 23334668899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc--
Q 023430          190 LYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL--  266 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~--  266 (282)
                      +|+||||+.++.+...... ...+++.+++.++.|++.||.|||++|||||||||+|||++.++.+||+|||+|+...  
T Consensus        76 ~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  155 (298)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred             eeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCC
Confidence            9999999986544433333 3569999999999999999999999999999999999999999999999999995321  


Q ss_pred             -----cchhheeeccCccc
Q 023430          267 -----CCFFFFLFLGGGVF  280 (282)
Q Consensus       267 -----~~~~~~~~~ape~~  280 (282)
                           ...|++.|+|||.+
T Consensus       156 ~~~~~~~~gt~~y~apE~~  174 (298)
T d1gz8a_         156 VRTYTHEVVTLWYRAPEIL  174 (298)
T ss_dssp             SBCTTCCBCCCTTCCHHHH
T ss_pred             cccceeecccceeeehhhh
Confidence                 12679999999975

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-40  Score=277.35  Aligned_cols=166  Identities=25%  Similarity=0.329  Sum_probs=142.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhh---HHHHHHHHHHHHHhcC--CCCeeeeeEEE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKN---HVDYMKAERDILTKVT--HPFIVQLRYSF  184 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~E~~~l~~l~--h~nIv~l~~~~  184 (282)
                      ++|++.++||+|+||+||+|+++     .++..||||++.+.......   ...++.+|+.+|+.++  |||||++++++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~   78 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRV-----SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF   78 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEE
Confidence            58999999999999999999987     45678999999865432211   1223567999999987  89999999999


Q ss_pred             EeCCEEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-CCcEEEEecCcc
Q 023430          185 QTRSKLYLILDFING-GHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-DGHVMAAHSLNS  262 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-~~~v~l~Dfg~s  262 (282)
                      .+.+..|+||||+.+ +++.+++.....+++.+++.++.||+.||.|||++|||||||||+|||++. ++.+||+|||+|
T Consensus        79 ~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          79 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG  158 (273)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             eeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccc
Confidence            999999999999976 578888888888999999999999999999999999999999999999985 479999999999


Q ss_pred             ccccc-----chhheeeccCccc
Q 023430          263 HNQLC-----CFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~~-----~~~~~~~~ape~~  280 (282)
                      .....     ..||+.|||||.+
T Consensus       159 ~~~~~~~~~~~~GT~~y~aPE~~  181 (273)
T d1xwsa_         159 ALLKDTVYTDFDGTRVYSPPEWI  181 (273)
T ss_dssp             EECCSSCBCCCCSCGGGSCHHHH
T ss_pred             eecccccccccccCCCcCCHHHH
Confidence            63221     2679999999986

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-39  Score=280.98  Aligned_cols=160  Identities=24%  Similarity=0.406  Sum_probs=136.4

Q ss_pred             CCCeEEEe-eeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHh-cCCCCeeeeeEEEEe
Q 023430          109 PGDFEIFR-VVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTK-VTHPFIVQLRYSFQT  186 (282)
Q Consensus       109 ~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~  186 (282)
                      .++|+++. .||+|+||+||+|+++     .+++.||||+++..        ..+.+|+.++.+ .+|||||+++++|.+
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~   76 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNK-----RTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYEN   76 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEEC-----CCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEee
Confidence            46899875 5999999999999987     45678999998643        236679988655 589999999999875


Q ss_pred             ----CCEEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---CCcEEEE
Q 023430          187 ----RSKLYLILDFINGGHLFFHLYRQ--GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---DGHVMAA  257 (282)
Q Consensus       187 ----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---~~~v~l~  257 (282)
                          ...+|||||||+||+|.+++.+.  ..+++.+++.++.||+.||.|||++||+||||||+|||++.   .+.+||+
T Consensus        77 ~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~  156 (335)
T d2ozaa1          77 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT  156 (335)
T ss_dssp             EETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEEC
T ss_pred             cccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccc
Confidence                45799999999999999999764  35899999999999999999999999999999999999985   4679999


Q ss_pred             ecCccccccc------chhheeeccCcccc
Q 023430          258 HSLNSHNQLC------CFFFFLFLGGGVFN  281 (282)
Q Consensus       258 Dfg~s~~~~~------~~~~~~~~ape~~~  281 (282)
                      |||+|+....      ..||+.|||||++.
T Consensus       157 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  186 (335)
T d2ozaa1         157 DFGFAKETTSHNSLTTPCYTPYYVAPEVLG  186 (335)
T ss_dssp             CCTTCEECCCCCCCCCCSCCCSSCCCCCCC
T ss_pred             ccceeeeccCCCccccccCCcccCCcHHHc
Confidence            9999963222      26899999999873

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-39  Score=277.02  Aligned_cols=166  Identities=22%  Similarity=0.276  Sum_probs=140.7

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .|.+..++|++.+.||+|+||.||+|+++.      ...||||++.....    ..+.+.+|+.+|++++|+|||+++++
T Consensus        11 ~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~------~~~vAiK~l~~~~~----~~~~~~~E~~~l~~l~h~nIv~~~g~   80 (285)
T d1fmka3          11 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG------TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAV   80 (285)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETT------TEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ceEcCHHHEEEeeEEeeCCCeEEEEEEECC------CCEEEEEEECcccC----CHHHHHHHHHHHHhcccCCEeEEEEE
Confidence            345667899999999999999999999762      34699999975532    23568899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYR--QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      +. .+..|+|||||++|+|..++..  ...+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+
T Consensus        81 ~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGl  159 (285)
T d1fmka3          81 VS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL  159 (285)
T ss_dssp             EC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred             Ee-cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccch
Confidence            85 4568999999999999887754  35699999999999999999999999999999999999999999999999999


Q ss_pred             cccc--------ccchhheeeccCccc
Q 023430          262 SHNQ--------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~--------~~~~~~~~~~ape~~  280 (282)
                      |+..        ....|++.|||||++
T Consensus       160 a~~~~~~~~~~~~~~~gt~~y~aPE~~  186 (285)
T d1fmka3         160 ARLIEDNEYTARQGAKFPIKWTAPEAA  186 (285)
T ss_dssp             TC--------------CCGGGSCHHHH
T ss_pred             hhhccCCCceeeccccccccccChHHH
Confidence            9632        112568999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-39  Score=278.69  Aligned_cols=176  Identities=17%  Similarity=0.231  Sum_probs=153.0

Q ss_pred             hhcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeee
Q 023430          103 SERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLR  181 (282)
Q Consensus       103 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~  181 (282)
                      ..|.+..++|++.++||+|+||.||+|++++......++.||||+++...  .......+.+|+.+++.+ +|||||+++
T Consensus        16 ~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~   93 (311)
T d1t46a_          16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLL   93 (311)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence            45667778999999999999999999998876555678899999997654  233445688999999999 699999999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCC
Q 023430          182 YSFQTRSKLYLILDFINGGHLFFHLYRQG------------------IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKP  243 (282)
Q Consensus       182 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp  243 (282)
                      +++.....+|+|||||++|+|..++.+..                  .+++..++.++.||+.||.|||+++||||||||
T Consensus        94 g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp  173 (311)
T d1t46a_          94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA  173 (311)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccc
Confidence            99999999999999999999999987543                  488999999999999999999999999999999


Q ss_pred             CceEEcCCCcEEEEecCccccccc---------chhheeeccCccc
Q 023430          244 ENILMDSDGHVMAAHSLNSHNQLC---------CFFFFLFLGGGVF  280 (282)
Q Consensus       244 ~NILl~~~~~v~l~Dfg~s~~~~~---------~~~~~~~~ape~~  280 (282)
                      +|||++.++.++++|||+++....         ..|++.|||||.+
T Consensus       174 ~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  219 (311)
T d1t46a_         174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI  219 (311)
T ss_dssp             GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH
T ss_pred             ccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHh
Confidence            999999999999999999963221         1558999999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-39  Score=276.27  Aligned_cols=169  Identities=19%  Similarity=0.204  Sum_probs=138.6

Q ss_pred             CCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Q 023430          108 GPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR  187 (282)
Q Consensus       108 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~  187 (282)
                      ...+|+++++||+|+||+||+|+++.++. .....||+|.++...  .....+.+.+|+.+|++++|||||++++++.++
T Consensus         7 k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~   83 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS   83 (317)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECC-----CCEEEEEEEECC------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             CHHHCEEeeEEecCCCeEEEEEEEcCCCC-EEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            44689999999999999999999875432 223358999886543  234456789999999999999999999999765


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQL  266 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~  266 (282)
                       ..+++||++.+|+|.+++... ..+++..++.++.||+.||.|||+++||||||||+|||++.++.+||+|||+|+...
T Consensus        84 -~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~  162 (317)
T d1xkka_          84 -TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  162 (317)
T ss_dssp             -SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred             -CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecc
Confidence             578889999999998887664 568999999999999999999999999999999999999999999999999986321


Q ss_pred             c---------chhheeeccCccc
Q 023430          267 C---------CFFFFLFLGGGVF  280 (282)
Q Consensus       267 ~---------~~~~~~~~ape~~  280 (282)
                      .         ..||+.|||||.+
T Consensus       163 ~~~~~~~~~~~~gt~~y~APE~l  185 (317)
T d1xkka_         163 AEEKEYHAEGGKVPIKWMALESI  185 (317)
T ss_dssp             TTCC--------CCTTTSCHHHH
T ss_pred             cccccccccccccCccccChHHH
Confidence            1         1468999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-39  Score=273.40  Aligned_cols=171  Identities=19%  Similarity=0.255  Sum_probs=136.2

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT  186 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~  186 (282)
                      +...+|++++.||+|+||.||+|+++...  .....||||++.+.........+.+.+|+.+|+.++||||+++++++.+
T Consensus         5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~--~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~   82 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT   82 (273)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTT--SCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             EchHHeEEEEEEecCCCeEEEEEEEECCC--CcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            44568999999999999999999876432  2344699999987765556666789999999999999999999999975


Q ss_pred             CCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          187 RSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       187 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                       +..++|||||++|++.+++.. .+.+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             -cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhc
Confidence             467899999999999887765 456999999999999999999999999999999999999999999999999999742


Q ss_pred             ccc----------hhheeeccCccc
Q 023430          266 LCC----------FFFFLFLGGGVF  280 (282)
Q Consensus       266 ~~~----------~~~~~~~ape~~  280 (282)
                      ..+          .|+..|||||.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~aPE~~  186 (273)
T d1u46a_         162 PQNDDHYVMQEHRKVPFAWCAPESL  186 (273)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHH
T ss_pred             ccCCCcceecCccccCcccCCHHHH
Confidence            111          357789999976

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-39  Score=275.46  Aligned_cols=175  Identities=18%  Similarity=0.217  Sum_probs=150.7

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEE
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYS  183 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~  183 (282)
                      .|.+..++|++.+.||+|+||.||+|.+++......+..||||+++...  .......+.+|+.++++++|||||+++++
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~   91 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGV   91 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcCCCCEeeeeeE
Confidence            4677789999999999999999999998765444456789999997543  23344568899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCc
Q 023430          184 FQTRSKLYLILDFINGGHLFFHLYRQ----------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGH  253 (282)
Q Consensus       184 ~~~~~~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~  253 (282)
                      +......++|||||++|+|..++...          ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.
T Consensus        92 ~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~  171 (308)
T d1p4oa_          92 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  171 (308)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred             EecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCce
Confidence            99999999999999999999988642          23688899999999999999999999999999999999999999


Q ss_pred             EEEEecCcccccccc---------hhheeeccCccc
Q 023430          254 VMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       254 v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      +||+|||+|+.....         .|++.|||||.+
T Consensus       172 ~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l  207 (308)
T d1p4oa_         172 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL  207 (308)
T ss_dssp             EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH
T ss_pred             EEEeecccceeccCCcceeeccceecccccCCHHHH
Confidence            999999999633221         568999999976

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7.7e-39  Score=272.79  Aligned_cols=164  Identities=19%  Similarity=0.332  Sum_probs=143.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|+++++||+|+||+||+|+++      .++.||||++..... .....+.+.+|+.+|+.++|||||++++++...+.
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~   74 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN------YGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR   74 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET------TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC
T ss_pred             CCceeccEEecCCCcEEEEEEeC------CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCc
Confidence            68999999999999999999875      457899999976543 33345678899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc----
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ----  265 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~----  265 (282)
                      .+++||++.++.+..+....+.+++..++.++.||+.||+|||+++||||||||+|||++.++.+|++|||+|...    
T Consensus        75 ~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~  154 (286)
T d1ob3a_          75 LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV  154 (286)
T ss_dssp             EEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred             eeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCc
Confidence            9999999998877777766788999999999999999999999999999999999999999999999999998531    


Q ss_pred             ---ccchhheeeccCccc
Q 023430          266 ---LCCFFFFLFLGGGVF  280 (282)
Q Consensus       266 ---~~~~~~~~~~ape~~  280 (282)
                         ....+++.|+|||.+
T Consensus       155 ~~~~~~~~~~~y~~pE~~  172 (286)
T d1ob3a_         155 RKYTHEIVTLWYRAPDVL  172 (286)
T ss_dssp             -------CCCTTCCHHHH
T ss_pred             cccceecccchhhhHHHH
Confidence               111568999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-38  Score=274.41  Aligned_cols=170  Identities=23%  Similarity=0.311  Sum_probs=141.9

Q ss_pred             CcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeeeeEEE
Q 023430          106 KIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQLRYSF  184 (282)
Q Consensus       106 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~  184 (282)
                      .+..++|++.++||+|+||.||+|+++.++   ....||||.+....  .....+.+.+|+++|+++ +|||||++++++
T Consensus         6 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~---~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~   80 (309)
T d1fvra_           6 VLDWNDIKFQDVIGEGNFGQVLKARIKKDG---LRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGAC   80 (309)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEETT---EEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred             ccCHHHcEEEEEEeeCCCcEEEEEEECCCC---eEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEE
Confidence            355679999999999999999999987431   22347788775432  233455688999999998 699999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEE
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILM  248 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl  248 (282)
                      ..++.+|+||||+++|+|.+++...                ..+++..+..++.||+.||.|||+++||||||||+|||+
T Consensus        81 ~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~  160 (309)
T d1fvra_          81 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV  160 (309)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             ecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE
Confidence            9999999999999999999998653                468999999999999999999999999999999999999


Q ss_pred             cCCCcEEEEecCcccccc------cchhheeeccCccc
Q 023430          249 DSDGHVMAAHSLNSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       249 ~~~~~v~l~Dfg~s~~~~------~~~~~~~~~ape~~  280 (282)
                      +.++.+||+|||+|+...      ...|+..|||||.+
T Consensus       161 ~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l  198 (309)
T d1fvra_         161 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESL  198 (309)
T ss_dssp             CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHH
T ss_pred             cCCCceEEccccccccccccccccceecCCcccchHHh
Confidence            999999999999996322      22578999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-38  Score=271.74  Aligned_cols=175  Identities=17%  Similarity=0.269  Sum_probs=143.0

Q ss_pred             hcCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCC--CCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc-CCCCeeee
Q 023430          104 ERKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDG--DSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV-THPFIVQL  180 (282)
Q Consensus       104 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l  180 (282)
                      .|.+..++|++++.||+|+||.||+|+...+...  ..+..||||+++++.  .......+.+|...+.++ +|||||++
T Consensus         7 ~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~   84 (299)
T d1fgka_           7 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINL   84 (299)
T ss_dssp             TTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEec
Confidence            3667778999999999999999999998765432  234579999997654  233445677888888887 79999999


Q ss_pred             eEEEEeCCEEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCC
Q 023430          181 RYSFQTRSKLYLILDFINGGHLFFHLYRQ----------------GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPE  244 (282)
Q Consensus       181 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~  244 (282)
                      ++++.+++.+|+|||||++|+|.+++...                ..+++..++.++.||+.||.|||+++||||||||+
T Consensus        85 ~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~  164 (299)
T d1fgka_          85 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  164 (299)
T ss_dssp             EEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             ccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeeccc
Confidence            99999999999999999999999999754                24899999999999999999999999999999999


Q ss_pred             ceEEcCCCcEEEEecCcccccccc---------hhheeeccCccc
Q 023430          245 NILMDSDGHVMAAHSLNSHNQLCC---------FFFFLFLGGGVF  280 (282)
Q Consensus       245 NILl~~~~~v~l~Dfg~s~~~~~~---------~~~~~~~ape~~  280 (282)
                      |||++.++.+||+|||++......         .|++.|||||.+
T Consensus       165 NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l  209 (299)
T d1fgka_         165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL  209 (299)
T ss_dssp             GEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHH
T ss_pred             ceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHh
Confidence            999999999999999999632221         568899999976

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-38  Score=267.71  Aligned_cols=164  Identities=20%  Similarity=0.335  Sum_probs=137.7

Q ss_pred             cCcCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEE
Q 023430          105 RKIGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSF  184 (282)
Q Consensus       105 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~  184 (282)
                      |.+..++|++.+.||+|+||.||+|+++       +..||||+++.+.     ..+.+.+|+.++++++||||+++++++
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l~HpnIv~~~g~~   69 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYR-------GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVI   69 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET-------TEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEE
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEEC-------CeEEEEEEECcHH-----HHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            5677789999999999999999999975       3569999996542     335688999999999999999999988


Q ss_pred             Ee-CCEEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCc
Q 023430          185 QT-RSKLYLILDFINGGHLFFHLYRQG--IFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLN  261 (282)
Q Consensus       185 ~~-~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~  261 (282)
                      .. .+.+|+||||+++|+|.+++....  .+++..++.++.||+.||.|||+++||||||||+|||++.+|.+|++|||+
T Consensus        70 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~  149 (262)
T d1byga_          70 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL  149 (262)
T ss_dssp             CCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred             EecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeeccccc
Confidence            54 456899999999999999986543  489999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc----hhheeeccCccc
Q 023430          262 SHNQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~~----~~~~~~~ape~~  280 (282)
                      ++..-..    .++..|||||++
T Consensus       150 s~~~~~~~~~~~~~~~y~aPE~l  172 (262)
T d1byga_         150 TKEASSTQDTGKLPVKWTAPEAL  172 (262)
T ss_dssp             ------------CCTTTSCHHHH
T ss_pred             ceecCCCCccccccccCCChHHH
Confidence            9753222    558899999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-37  Score=268.57  Aligned_cols=164  Identities=16%  Similarity=0.239  Sum_probs=135.3

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS-  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-  188 (282)
                      ++|++++.||+|+||+||+|+++     .++..||||++.+..  .....+.+.+|+.+|+.++||||+++++++.... 
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~   80 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDN-----VNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI   80 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEET-----TTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred             CCeEEEEEEeeccCeEEEEEEEC-----CCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccc
Confidence            46999999999999999999976     457789999997543  2344566889999999999999999999987643 


Q ss_pred             ---EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccc
Q 023430          189 ---KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQ  265 (282)
Q Consensus       189 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~  265 (282)
                         ..+++++++.+|+|.+++.. +.+++.+++.++.|++.||+|||++|||||||||+|||++.+|.+||+|||+|...
T Consensus        81 ~~~~~~~l~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          81 EQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             TTCCCEEEEEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cccceEEEEEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeec
Confidence               23444556678999999865 46899999999999999999999999999999999999999999999999998532


Q ss_pred             c----------cchhheeeccCcccc
Q 023430          266 L----------CCFFFFLFLGGGVFN  281 (282)
Q Consensus       266 ~----------~~~~~~~~~ape~~~  281 (282)
                      .          ...|++.|+|||.+.
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~l~  185 (345)
T d1pmea_         160 DPDHDHTGFLTEYVATRWYRAPEIML  185 (345)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCGGGTT
T ss_pred             cCCCccceeeccccccceechHHHhh
Confidence            1          115799999999873

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=270.78  Aligned_cols=164  Identities=20%  Similarity=0.315  Sum_probs=136.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS  188 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~  188 (282)
                      .++|++++.||+|+||+||+|.++     .+++.||||++++... .....+.+.+|+.+|+.++|||||+++++|...+
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~   90 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDG-----RTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE   90 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEET-----TTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred             CCcEEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEEchhhc-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCc
Confidence            468999999999999999999987     4578899999976542 3445667889999999999999999999997654


Q ss_pred             ------EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcc
Q 023430          189 ------KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNS  262 (282)
Q Consensus       189 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s  262 (282)
                            .+|+||||| +.+|..++ +.+.+++..++.++.||+.||.|||++|||||||||+|||++.++.+|++|||+|
T Consensus        91 ~~~~~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_          91 TLDDFTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             STTTCCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             cccccceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccce
Confidence                  579999999 55666655 4567999999999999999999999999999999999999999999999999999


Q ss_pred             cccc----cchhheeeccCccc
Q 023430          263 HNQL----CCFFFFLFLGGGVF  280 (282)
Q Consensus       263 ~~~~----~~~~~~~~~ape~~  280 (282)
                      ...-    ...|++.|||||++
T Consensus       169 ~~~~~~~~~~~~t~~y~aPE~~  190 (346)
T d1cm8a_         169 RQADSEMTGYVVTRWYRAPEVI  190 (346)
T ss_dssp             EECCSSCCSSCSCGGGCCTHHH
T ss_pred             eccCCccccccccccccCHHHH
Confidence            6422    23779999999986

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-37  Score=261.82  Aligned_cols=165  Identities=21%  Similarity=0.351  Sum_probs=147.1

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRSK  189 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~  189 (282)
                      ++|+++++||+|+||+||+|+++     .+++.||||+++... ......+.+.+|+.+|+.++||||+++++++.....
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~   75 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CCCEeeeEEecCcCeEEEEEEEC-----CCCcEEEEEEEehhh-CChHHHHHHHHHHHHHHhcCcCCEEeeccccccccc
Confidence            58999999999999999999987     467789999997654 234556778899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccccccc--
Q 023430          190 LYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLC--  267 (282)
Q Consensus       190 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~--  267 (282)
                      .++|||++.+++|..++...+.+++..++.++.|++.||+|||++|||||||||+|||++.++.+||+|||.|.....  
T Consensus        76 ~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~  155 (292)
T d1unla_          76 LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred             eeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCC
Confidence            999999999999988888888899999999999999999999999999999999999999999999999999964221  


Q ss_pred             -----chhheeeccCccc
Q 023430          268 -----CFFFFLFLGGGVF  280 (282)
Q Consensus       268 -----~~~~~~~~ape~~  280 (282)
                           ..+++.|+|||.+
T Consensus       156 ~~~~~~~~~~~~~~pe~~  173 (292)
T d1unla_         156 RCYSAEVVTLWYRPPDVL  173 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHH
T ss_pred             ccceeeccccchhhhhHh
Confidence                 1447888888876

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-37  Score=263.65  Aligned_cols=159  Identities=23%  Similarity=0.268  Sum_probs=133.0

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTRS--  188 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--  188 (282)
                      +|.+.++||+|+||.||+|++.       +..||||++.....    .......|+..++.++|||||++++++...+  
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~~-------g~~vAvK~~~~~~~----~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~   72 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKWR-------GEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGT   72 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEET-------TEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred             EEEEEEEEeeCCCeEEEEEEEC-------CEEEEEEEECccch----hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCc
Confidence            6889999999999999999864       56799999865431    1122334555666789999999999987654  


Q ss_pred             --EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--------CCCEeeccCCCceEEcCCCcEEEEe
Q 023430          189 --KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHK--------CGIVHRDLKPENILMDSDGHVMAAH  258 (282)
Q Consensus       189 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~--------~~iiHrDlKp~NILl~~~~~v~l~D  258 (282)
                        .+|+|||||++|+|.+++.+. .+++.+...++.|++.||.|||.        +|||||||||+||||+.++.+||+|
T Consensus        73 ~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~D  151 (303)
T d1vjya_          73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECC
T ss_pred             ceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEe
Confidence              689999999999999999764 58899999999999999999996        5899999999999999999999999


Q ss_pred             cCccccccc-----------chhheeeccCcccc
Q 023430          259 SLNSHNQLC-----------CFFFFLFLGGGVFN  281 (282)
Q Consensus       259 fg~s~~~~~-----------~~~~~~~~ape~~~  281 (282)
                      ||+++....           ..||+.|||||.++
T Consensus       152 FGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  185 (303)
T d1vjya_         152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD  185 (303)
T ss_dssp             CTTCEEEETTTTEECC----CCSCGGGCCHHHHT
T ss_pred             cCccccccCCCcceeccccceecccCcCChhhcc
Confidence            999963221           15799999999874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-37  Score=268.62  Aligned_cols=172  Identities=43%  Similarity=0.725  Sum_probs=148.6

Q ss_pred             cCCCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh-hhhHHHHHHHHHHHHHhcCC-CCeeeeeEEE
Q 023430          107 IGPGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII-KKNHVDYMKAERDILTKVTH-PFIVQLRYSF  184 (282)
Q Consensus       107 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~  184 (282)
                      ++.++|++++.||+|+||+||+|++...  ..+++.||||++++.... +....+.+.+|+.+|++++| |||+++++++
T Consensus        21 ~~l~~y~~~~~IG~G~fg~Vy~~~~~~~--~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~   98 (322)
T d1vzoa_          21 VGIENFELLKVLGTGAYGKVFLVRKISG--HDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF   98 (322)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSS--TTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred             cchhceEEEEEEecCCCeEEEEEEECcc--CCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeee
Confidence            4567899999999999999999987532  246788999998765422 12233457789999999976 8999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccc
Q 023430          185 QTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHN  264 (282)
Q Consensus       185 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~  264 (282)
                      .+...++++|||+.+|+|..++...+.+++..+..++.||+.||.|||+++||||||||+|||++.+|.+||+|||+|+.
T Consensus        99 ~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~  178 (322)
T d1vzoa_          99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE  178 (322)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             ccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhh
Confidence            99999999999999999999999988899999999999999999999999999999999999999999999999999853


Q ss_pred             cc--------cchhheeeccCccc
Q 023430          265 QL--------CCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~~--------~~~~~~~~~ape~~  280 (282)
                      ..        ...|++.||+||.+
T Consensus       179 ~~~~~~~~~~~~~g~~~~~~pe~~  202 (322)
T d1vzoa_         179 FVADETERAYDFCGTIEYMAPDIV  202 (322)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHH
T ss_pred             hcccccccccccccccccchhHHh
Confidence            21        12679999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-37  Score=265.79  Aligned_cols=167  Identities=22%  Similarity=0.295  Sum_probs=135.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhc---CCCCeeeeeEEEEe
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKV---THPFIVQLRYSFQT  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~  186 (282)
                      ++|+++++||+|+||+||+|+++.    ..++.||||+++...... .....+.+|+.+|+.+   +||||++++++|..
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~----~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~   81 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   81 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT----TTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             CCEEEEEEEecccCeEEEEEEEEC----CCCEEEEEEEEehhhccc-hHHHHHHHHHHHHHHHhhcCCCCcceeeeeecc
Confidence            589999999999999999999763    235679999997654222 1122355677776665   79999999999853


Q ss_pred             -----CCEEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          187 -----RSKLYLILDFINGGHLFFHLYR-QGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       187 -----~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                           ...++++|||+.++.+...... ...+++..++.++.|++.||+|||+++||||||||+|||++.++.+||+|||
T Consensus        82 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg  161 (305)
T d1blxa_          82 SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG  161 (305)
T ss_dssp             EECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             cccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchh
Confidence                 3478999999998876544433 3558999999999999999999999999999999999999999999999999


Q ss_pred             cccccccc------hhheeeccCcccc
Q 023430          261 NSHNQLCC------FFFFLFLGGGVFN  281 (282)
Q Consensus       261 ~s~~~~~~------~~~~~~~ape~~~  281 (282)
                      +++.....      .||+.|||||++.
T Consensus       162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~  188 (305)
T d1blxa_         162 LARIYSFQMALTSVVVTLWYRAPEVLL  188 (305)
T ss_dssp             SCCCCCGGGGGCCCCCCCTTCCHHHHT
T ss_pred             hhhhhcccccCCCcccChhhcCcchhc
Confidence            98643222      6799999999873

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=4e-37  Score=267.00  Aligned_cols=158  Identities=22%  Similarity=0.350  Sum_probs=136.0

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~  187 (282)
                      .++|+++++||+|+||+||+|+++     .+++.||||+++...      .+.+.+|+.+|+.+. ||||++++++|...
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~~------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~  102 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINI-----TNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDP  102 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSSC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECT
T ss_pred             CcCeEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEECHHH------HHHHHHHHHHHHhccCCCCCcEEEEEEEec
Confidence            467999999999999999999987     467889999986432      345788999999996 99999999999754


Q ss_pred             --CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEEEecCcccc
Q 023430          188 --SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMAAHSLNSHN  264 (282)
Q Consensus       188 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l~Dfg~s~~  264 (282)
                        ..+++|||||.+++|..+.   +.+++.+++.++.||+.||.|||++|||||||||+|||++.++ .++|+|||+|..
T Consensus       103 ~~~~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~  179 (328)
T d3bqca1         103 VSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF  179 (328)
T ss_dssp             TTCSEEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEE
T ss_pred             CCCceeEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeeccccccee
Confidence              5699999999999986643   4699999999999999999999999999999999999999765 589999999963


Q ss_pred             c------ccchhheeeccCccc
Q 023430          265 Q------LCCFFFFLFLGGGVF  280 (282)
Q Consensus       265 ~------~~~~~~~~~~ape~~  280 (282)
                      .      ....+|+.|+|||.+
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~  201 (328)
T d3bqca1         180 YHPGQEYNVRVASRYFKGPELL  201 (328)
T ss_dssp             CCTTCCCCSCCSCGGGCCHHHH
T ss_pred             ccCCCcccccccCccccCcccc
Confidence            2      122569999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=260.91  Aligned_cols=163  Identities=18%  Similarity=0.185  Sum_probs=136.3

Q ss_pred             EEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe-CCEEEE
Q 023430          114 IFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT-RSKLYL  192 (282)
Q Consensus       114 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~l  192 (282)
                      ..++||+|+||+||+|++....  .....||||++++..  .....+.+.+|+++|++++||||+++++++.. ++..++
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~--~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~l  106 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  106 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC------CEEEEEEEECCCC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEE
T ss_pred             cceEEeecCCeEEEEEEEECCC--CEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEE
Confidence            3678999999999999987432  234468999986532  34456779999999999999999999999765 568999


Q ss_pred             EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCcccccccc---
Q 023430          193 ILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSHNQLCC---  268 (282)
Q Consensus       193 v~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~~~~~~---  268 (282)
                      |||||++|+|.+++... ..+++..++.++.|++.||.|||+++|+||||||+|||+++++.+||+|||+++.....   
T Consensus       107 v~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             EEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence            99999999999988754 34778889999999999999999999999999999999999999999999999632111   


Q ss_pred             --------hhheeeccCccc
Q 023430          269 --------FFFFLFLGGGVF  280 (282)
Q Consensus       269 --------~~~~~~~ape~~  280 (282)
                              .|++.|||||.+
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~  206 (311)
T d1r0pa_         187 SVHNKTGAKLPVKWMALESL  206 (311)
T ss_dssp             CTTCTTCSSCCGGGSCHHHH
T ss_pred             cceecccccccccccChHHH
Confidence                    468899999976

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-37  Score=266.21  Aligned_cols=166  Identities=20%  Similarity=0.276  Sum_probs=138.1

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe--
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT--  186 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--  186 (282)
                      .++|++++.||+|+||+||+|+++     .+++.||||++..... .....+.+.+|+.+|+.++|+||+++++++..  
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~   82 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHR-----KTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKA   82 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEC----C-TTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred             cCCEEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHHhcCCCccceEeeeeccc
Confidence            468999999999999999999987     4677899999876543 23344567889999999999999999998754  


Q ss_pred             ------CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecC
Q 023430          187 ------RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSL  260 (282)
Q Consensus       187 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg  260 (282)
                            .+.+|+||||+.++.+.........+++..++.++.|++.||.|||++|||||||||+|||++.++.+|++|||
T Consensus        83 ~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg  162 (318)
T d3blha1          83 SPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG  162 (318)
T ss_dssp             --------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCT
T ss_pred             ccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecc
Confidence                  34689999999888776555556679999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc-----------chhheeeccCccc
Q 023430          261 NSHNQLC-----------CFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~~-----------~~~~~~~~ape~~  280 (282)
                      ++...-.           ..||+.|||||++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~  193 (318)
T d3blha1         163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELL  193 (318)
T ss_dssp             TCEECCC-----CCCCCSCCSCGGGCCHHHH
T ss_pred             eeeecccccccccccccceecCHHHhhHHHH
Confidence            9952111           1479999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-37  Score=268.35  Aligned_cols=158  Identities=25%  Similarity=0.399  Sum_probs=132.2

Q ss_pred             CeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC---
Q 023430          111 DFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR---  187 (282)
Q Consensus       111 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~---  187 (282)
                      +|+.+++||+|+||+||+|+++     .+++.||||++..+...       ..+|+.+|+.++|+||++++++|...   
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~-------~~~Ei~il~~l~h~niv~~~~~~~~~~~~   88 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLC-----DSGELVAIKKVLQDKRF-------KNRELQIMRKLDHCNIVRLRYFFYSSGEK   88 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCSSS-------CCHHHHHHHHCCCTTBCCEEEEEEEC--C
T ss_pred             CcEeeeEEeeCcCeEEEEEEEC-----CCCCEEEEEEECccchH-------HHHHHHHHHhcCCCCCCcEEEEEEecCcc
Confidence            6999999999999999999987     46788999999765321       34699999999999999999998543   


Q ss_pred             ---CEEEEEEeccCCCchHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCC-cEEEEecC
Q 023430          188 ---SKLYLILDFINGGHLFFHL---YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDG-HVMAAHSL  260 (282)
Q Consensus       188 ---~~~~lv~e~~~~g~L~~~l---~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~-~v~l~Dfg  260 (282)
                         ..+|||||||+++.+..+.   .....+++.+++.++.||+.||+|||++|||||||||+|||++.++ .+||+|||
T Consensus        89 ~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG  168 (350)
T d1q5ka_          89 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG  168 (350)
T ss_dssp             CSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCT
T ss_pred             CCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEeccc
Confidence               3589999999876443332   3355699999999999999999999999999999999999999775 89999999


Q ss_pred             cccccc------cchhheeeccCccc
Q 023430          261 NSHNQL------CCFFFFLFLGGGVF  280 (282)
Q Consensus       261 ~s~~~~------~~~~~~~~~ape~~  280 (282)
                      ++....      ...|++.|+|||.+
T Consensus       169 ~a~~~~~~~~~~~~~gt~~y~aPE~~  194 (350)
T d1q5ka_         169 SAKQLVRGEPNVSYICSRYYRAPELI  194 (350)
T ss_dssp             TCEECCTTSCCCSCCSCTTSCCHHHH
T ss_pred             chhhccCCcccccccccccccChHHh
Confidence            986322      22679999999975

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-36  Score=264.35  Aligned_cols=165  Identities=18%  Similarity=0.240  Sum_probs=137.8

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQTR-  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-  187 (282)
                      .++|+++++||+|+||+||+|+++     .+++.||||++.+... .....+.+.+|+.+|+.++|||||++++++... 
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   90 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEET-----TTTEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEECchhc-ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecc
Confidence            468999999999999999999977     4678899999976542 334455688999999999999999999998643 


Q ss_pred             ----CEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          188 ----SKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       188 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                          ...+++|+++.+|+|.+++. .+.+++..++.++.||+.||+|||++|||||||||+|||++.+|.+|++|||+|.
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~-~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             ccccCceEEEEEeecCCchhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhc
Confidence                34466677888999998885 4569999999999999999999999999999999999999999999999999986


Q ss_pred             ccccc----hhheeeccCccc
Q 023430          264 NQLCC----FFFFLFLGGGVF  280 (282)
Q Consensus       264 ~~~~~----~~~~~~~ape~~  280 (282)
                      .....    .|++.|||||.+
T Consensus       170 ~~~~~~~~~~g~~~y~apE~~  190 (348)
T d2gfsa1         170 HTDDEMTGYVATRWYRAPEIM  190 (348)
T ss_dssp             CCTGGGSSSCHHHHTSCHHHH
T ss_pred             ccCcccccccccccccCchhh
Confidence            43222    679999999974

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.1e-35  Score=253.90  Aligned_cols=161  Identities=17%  Similarity=0.170  Sum_probs=137.9

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCC-CCeeeeeEEEEeC
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTH-PFIVQLRYSFQTR  187 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~  187 (282)
                      .++|++.++||+|+||+||+|+++     .+++.||||++......     ..+.+|+++++.++| +||+.+++++...
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~~-----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~   73 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNL-----LNNQQVAIKFEPRRSDA-----PQLRDEYRTYKLLAGCTGIPNVYYFGQEG   73 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEET-----TTTEEEEEEEEECCTTS-----CCHHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred             CCceEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEEccccCc-----HHHHHHHHHHHHhcCCCCCCEEEEEeecC
Confidence            368999999999999999999987     45778999998654321     236678999999975 8999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC-----CCcEEEEecCc
Q 023430          188 SKLYLILDFINGGHLFFHLYRQ-GIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS-----DGHVMAAHSLN  261 (282)
Q Consensus       188 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~-----~~~v~l~Dfg~  261 (282)
                      ...++||||+ +++|.+++... ..+++..+..++.|++.||+|||++|||||||||+|||++.     ++.++|+|||+
T Consensus        74 ~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~  152 (293)
T d1csna_          74 LHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM  152 (293)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred             CccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccce
Confidence            9999999999 67898888765 46999999999999999999999999999999999999974     57899999999


Q ss_pred             cccccc--------------chhheeeccCccc
Q 023430          262 SHNQLC--------------CFFFFLFLGGGVF  280 (282)
Q Consensus       262 s~~~~~--------------~~~~~~~~ape~~  280 (282)
                      |+....              -.||+.|||||.+
T Consensus       153 a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~  185 (293)
T d1csna_         153 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTH  185 (293)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             eEEcccCccccceeecccCceEEchhhcCHHHh
Confidence            964211              1589999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-36  Score=262.68  Aligned_cols=163  Identities=21%  Similarity=0.307  Sum_probs=133.9

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCeeeeeEEEEe---
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFIVQLRYSFQT---  186 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---  186 (282)
                      ++|+++++||+|+||+||+|+++     .++..||||++++... .....+.+.+|+.+|+.++|||||+++++|..   
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~-----~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~   90 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT   90 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEET-----TTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS
T ss_pred             CCeEEEEEeecCcCeEEEEEEEC-----CCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccc
Confidence            57999999999999999999987     4678899999986543 34455678899999999999999999999964   


Q ss_pred             ---CCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          187 ---RSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       187 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                         ...+|+|||||.++.+ ..+  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++++|||+++
T Consensus        91 ~~~~~~~~iv~Ey~~~~l~-~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~  167 (355)
T d2b1pa1          91 LEEFQDVYLVMELMDANLC-QVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_dssp             TTTCCEEEEEEECCSEEHH-HHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             cccCceeEEEEeccchHHH-Hhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhh
Confidence               3689999999976544 444  4568999999999999999999999999999999999999999999999999886


Q ss_pred             ccccc------hhheeeccCcccc
Q 023430          264 NQLCC------FFFFLFLGGGVFN  281 (282)
Q Consensus       264 ~~~~~------~~~~~~~ape~~~  281 (282)
                      .....      .+|+.|+|||++.
T Consensus       168 ~~~~~~~~~~~~~t~~y~aPE~l~  191 (355)
T d2b1pa1         168 TAGTSFMMTPYVVTRYYRAPEVIL  191 (355)
T ss_dssp             -------------CCTTCCHHHHT
T ss_pred             ccccccccccccccccccChhhhc
Confidence            43332      6799999999873

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-35  Score=252.03  Aligned_cols=161  Identities=15%  Similarity=0.172  Sum_probs=131.5

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-eeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-VQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~  188 (282)
                      ++|++.+.||+|+||.||+|+++     .+++.||||++......     +.+.+|+++++.++|+|+ +.+.+++...+
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~~-----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~   76 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDI-----AAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGD   76 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEEEESCTTS-----CCHHHHHHHHHHSTTSTTCCCEEEEEEETT
T ss_pred             CEEEEeEEEeeCCCcEEEEEEEC-----CCCCEEEEEEEchhccC-----HHHHHHHHHHHHccCCCcccEEEEEEecCC
Confidence            47999999999999999999987     45678999998764321     236789999999987665 55566677888


Q ss_pred             EEEEEEeccCCCchHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcC---CCcEEEEecCcccc
Q 023430          189 KLYLILDFINGGHLFFHL-YRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDS---DGHVMAAHSLNSHN  264 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l-~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~---~~~v~l~Dfg~s~~  264 (282)
                      ..++||||+.+ +|...+ ...+.+++..+..++.|++.||+|||++|||||||||+|||++.   +..++++|||+|+.
T Consensus        77 ~~~ivme~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~  155 (299)
T d1ckia_          77 YNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  155 (299)
T ss_dssp             EEEEEEECCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred             EEEEEEEEcCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCccee
Confidence            99999999955 555544 44567999999999999999999999999999999999999864   45799999999964


Q ss_pred             ccc--------------chhheeeccCcccc
Q 023430          265 QLC--------------CFFFFLFLGGGVFN  281 (282)
Q Consensus       265 ~~~--------------~~~~~~~~ape~~~  281 (282)
                      ...              -.||+.|||||.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  186 (299)
T d1ckia_         156 YRDARTHQHIPYRENKNLTGTARYASINTHL  186 (299)
T ss_dssp             CBCTTTCCBCCCCBCCSCCCCSSSCCHHHHT
T ss_pred             ccccccccceeccccCCcCCCccccCHHHHh
Confidence            211              15899999999863

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=6.9e-30  Score=223.77  Aligned_cols=163  Identities=21%  Similarity=0.296  Sum_probs=129.2

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-----------CCCee
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-----------HPFIV  178 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv  178 (282)
                      ++|+++++||+|+||+||+|+++     .+++.||||+++++..    ..+.+.+|+.+++.++           |+||+
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~-----~~g~~vAvKvi~~~~~----~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv   83 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDM-----VNNTHVAMKIVRGDKV----YTEAAEDEIKLLQRVNDADNTKEDSMGANHIL   83 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBC
T ss_pred             CcEEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEecccc----chHHHHHHHHHHHHhcchhhhhhhhcCcCceE
Confidence            56999999999999999999977     4678899999976532    2345677888887765           57899


Q ss_pred             eeeEEEEe--CCEEEEEEeccCCCchHHHH-H--hcCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeeccCCCceEEcCCC
Q 023430          179 QLRYSFQT--RSKLYLILDFINGGHLFFHL-Y--RQGIFREDQARFYTAEIVSAVSHLHK-CGIVHRDLKPENILMDSDG  252 (282)
Q Consensus       179 ~l~~~~~~--~~~~~lv~e~~~~g~L~~~l-~--~~~~~~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~NILl~~~~  252 (282)
                      ++++++..  ....+++|+++..+...... .  ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~  163 (362)
T d1q8ya_          84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD  163 (362)
T ss_dssp             CCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEE
T ss_pred             EEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccC
Confidence            99988754  45677777776655433222 2  23568999999999999999999997 8999999999999998765


Q ss_pred             c------EEEEecCcccccccc----hhheeeccCcccc
Q 023430          253 H------VMAAHSLNSHNQLCC----FFFFLFLGGGVFN  281 (282)
Q Consensus       253 ~------v~l~Dfg~s~~~~~~----~~~~~~~ape~~~  281 (282)
                      .      ++++|||.|......    .|++.|||||++.
T Consensus       164 ~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~  202 (362)
T d1q8ya_         164 SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLL  202 (362)
T ss_dssp             TTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHH
T ss_pred             cccccceeeEeecccccccccccccccccccccChhhcc
Confidence            4      999999998643222    6799999999863

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.94  E-value=1.4e-26  Score=185.01  Aligned_cols=135  Identities=18%  Similarity=0.192  Sum_probs=104.2

Q ss_pred             eEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhh---------------hhhHHHHHHHHHHHHHhcCCCC
Q 023430          112 FEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTII---------------KKNHVDYMKAERDILTKVTHPF  176 (282)
Q Consensus       112 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------~~~~~~~~~~E~~~l~~l~h~n  176 (282)
                      +.+.++||+|+||+||+|+..      .++.||||+++.....               ..........|...+..+.|.+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~------~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   75 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLA   75 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred             chhCCEeeeCcceEEEEEECC------CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCC
Confidence            467899999999999999864      4678999987642211               0111233456888999999999


Q ss_pred             eeeeeEEEEeCCEEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCEeeccCCCceEEcCCCcEEE
Q 023430          177 IVQLRYSFQTRSKLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLHKCGIVHRDLKPENILMDSDGHVMA  256 (282)
Q Consensus       177 Iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~NILl~~~~~v~l  256 (282)
                      ++..+++..    .+++|||+++..+..       +++..+..++.|++.+|.|||++||+||||||+|||++++ .++|
T Consensus        76 v~~~~~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~l  143 (191)
T d1zara2          76 VPKVYAWEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWI  143 (191)
T ss_dssp             SCCEEEEET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEE
T ss_pred             cceEEEecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEE
Confidence            998876532    379999999865532       4555667889999999999999999999999999999864 5899


Q ss_pred             EecCcccc
Q 023430          257 AHSLNSHN  264 (282)
Q Consensus       257 ~Dfg~s~~  264 (282)
                      +|||.|..
T Consensus       144 iDFG~a~~  151 (191)
T d1zara2         144 IDFPQSVE  151 (191)
T ss_dssp             CCCTTCEE
T ss_pred             EECCCccc
Confidence            99998853

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.79  E-value=3.1e-08  Score=80.65  Aligned_cols=139  Identities=10%  Similarity=-0.003  Sum_probs=87.6

Q ss_pred             CCeEEEeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCC
Q 023430          110 GDFEIFRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVT-HPFIVQLRYSFQTRS  188 (282)
Q Consensus       110 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~  188 (282)
                      ..|++.+..+-++.+.||+...       .+..+++|+.........   ..+.+|...+..+. +--+.+++.+...++
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~-------~~~~~vlk~~~~~~~~~~---~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~   83 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVG-------ENENLYLKMTDSRYKGTT---YDVEREKDMMLWLEGKLPVPKVLHFERHDG   83 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEEC-------SSCEEEEEEECGGGTTST---TCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred             hceEEEEcCCCCCCCcEEEEEe-------CCCeEEEEEcCCCcccch---hhHHHHHHHHHHHhccCCCCcEEEEEecCC
Confidence            3577777655555678998762       344578888765432221   23567888887764 333566777778888


Q ss_pred             EEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH------------------------------------
Q 023430          189 KLYLILDFINGGHLFFHLYRQGIFREDQARFYTAEIVSAVSHLH------------------------------------  232 (282)
Q Consensus       189 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~gL~ylH------------------------------------  232 (282)
                      ..|+||++++|..+.......  ..   ...++.++.+.+..||                                    
T Consensus        84 ~~~lv~~~l~G~~~~~~~~~~--~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T d1j7la_          84 WSNLLMSEADGVLCSEEYEDE--QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEEEEECCSSEEHHHHTTTC--SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGG
T ss_pred             ceEEEEEeccccccccccccc--cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcc
Confidence            999999999987764322110  00   1112222222233333                                    


Q ss_pred             -----------------HC------CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          233 -----------------KC------GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       233 -----------------~~------~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                                       ..      .++|+|+.+.|||+++++.+.|+||+.+.
T Consensus       159 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             STTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                             11      27999999999999876666799998875

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.32  E-value=1.1e-06  Score=75.96  Aligned_cols=80  Identities=15%  Similarity=0.247  Sum_probs=47.6

Q ss_pred             EeeeCcCCCeEEEEEEEcCCCCCCCCcEEEEEEeechhhhh----hhHHHHHHHHHHHHHhcC-C--CCeeeeeEEEEeC
Q 023430          115 FRVVGQGAFGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIK----KNHVDYMKAERDILTKVT-H--PFIVQLRYSFQTR  187 (282)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~E~~~l~~l~-h--~nIv~l~~~~~~~  187 (282)
                      .+.||.|....||++...     ..++.+++|.-.......    ....++...|.+.|+.+. +  ..+.+++.+  +.
T Consensus        31 ~~eig~G~~N~vfrV~~~-----~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~  103 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQ-----EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DT  103 (392)
T ss_dssp             EEECCSSSSEEEEEEEC---------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ET
T ss_pred             EEEeCCCceEeEEEEEeC-----CCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cC
Confidence            456899999999998743     234568888654321110    112234556888777663 2  344555543  44


Q ss_pred             CEEEEEEeccCCCc
Q 023430          188 SKLYLILDFINGGH  201 (282)
Q Consensus       188 ~~~~lv~e~~~~g~  201 (282)
                      ...++|||++.+..
T Consensus       104 ~~~~lvmE~L~~~~  117 (392)
T d2pula1         104 EMAVTVMEDLSHLK  117 (392)
T ss_dssp             TTTEEEECCCTTSE
T ss_pred             CCCEEEEeccCCcc
Confidence            55688999998754

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.26  E-value=1.7e-06  Score=69.65  Aligned_cols=135  Identities=13%  Similarity=0.096  Sum_probs=78.9

Q ss_pred             eeCcCC-CeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCC--CeeeeeEEEEeCCEEEEE
Q 023430          117 VVGQGA-FGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHP--FIVQLRYSFQTRSKLYLI  193 (282)
Q Consensus       117 ~lG~G~-fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~~~~~lv  193 (282)
                      .+..|. -+.||+....      .+..+++|.......      ..+..|...|+.+...  .+.+++.+....+..++|
T Consensus        17 ~~~~G~s~~~v~r~~~~------~~~~~vlK~~~~~~~------~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v   84 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQ------GRPVLFVKTDLSGAL------NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL   84 (255)
T ss_dssp             ECSCTTSSCEEEEEECT------TSCCEEEEEECSCTT------SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred             EcCCcccCCeEEEEEeC------CCCEEEEEeCCccCH------hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEE
Confidence            345554 4688987633      344578887654321      2256688877776532  355677777788889999


Q ss_pred             EeccCCCchHH--------------HHHhcC-------CC--CHHHHHH-----HH---------------HHHHHHHHH
Q 023430          194 LDFINGGHLFF--------------HLYRQG-------IF--REDQARF-----YT---------------AEIVSAVSH  230 (282)
Q Consensus       194 ~e~~~~g~L~~--------------~l~~~~-------~~--~~~~~~~-----i~---------------~qi~~gL~y  230 (282)
                      |++++|.++..              .+.+-.       .+  .......     +.               ......+..
T Consensus        85 ~~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (255)
T d1nd4a_          85 LGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR  164 (255)
T ss_dssp             EECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred             EEeeeccccccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHH
Confidence            99998865421              111100       00  0000000     00               001222333


Q ss_pred             HHHC-------CCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          231 LHKC-------GIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       231 lH~~-------~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      +...       .++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       165 l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         165 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            4332       27999999999999877667799998774

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=0.0001  Score=61.42  Aligned_cols=68  Identities=12%  Similarity=0.263  Sum_probs=41.7

Q ss_pred             CeEEEEEEEcCCCCCCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-----eee--eEEEEeCCEEEEEEe
Q 023430          123 FGKVFQVKKKGVDDGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-----VQL--RYSFQTRSKLYLILD  195 (282)
Q Consensus       123 fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----v~l--~~~~~~~~~~~lv~e  195 (282)
                      --.||+++..      .+..|++|+.+....    ..+.+..|...+..|...+|     +..  -..+...+..+.+++
T Consensus        35 EN~vy~v~~~------dg~~~VlK~~rp~~~----s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~  104 (325)
T d1zyla1          35 ENRVYQFQDE------DRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP  104 (325)
T ss_dssp             SSEEEEECCT------TCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred             cceeEEEEcC------CCCEEEEEEeCCCCC----CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEe
Confidence            4689987642      456699999865432    12346678877776642222     111  122345677899999


Q ss_pred             ccCCC
Q 023430          196 FINGG  200 (282)
Q Consensus       196 ~~~~g  200 (282)
                      +++|.
T Consensus       105 ~~~G~  109 (325)
T d1zyla1         105 SVGGR  109 (325)
T ss_dssp             CCCCE
T ss_pred             ecCCc
Confidence            99874

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.11  E-value=0.0011  Score=56.39  Aligned_cols=84  Identities=15%  Similarity=0.152  Sum_probs=50.7

Q ss_pred             CCCeEEEeeeCcCCCeEEEEEEEcCCCC--CCCCcEEEEEEeechhhhhhhHHHHHHHHHHHHHhcCCCCe-eeeeEEEE
Q 023430          109 PGDFEIFRVVGQGAFGKVFQVKKKGVDD--GDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVTHPFI-VQLRYSFQ  185 (282)
Q Consensus       109 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~  185 (282)
                      .+++++ +.|+-|-.-.+|++.......  ......|.+++....    .... ...+|..+++.+.-.++ .++++++.
T Consensus        42 ~~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~----~~~i-dr~~E~~i~~~ls~~gl~Pkll~~~~  115 (395)
T d1nw1a_          42 LEHLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETES-HLVAESVIFTLLSERHLGPKLYGIFS  115 (395)
T ss_dssp             GGGEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHH-HHHHHHHHHHHHHHTTSSSCEEEEET
T ss_pred             ccceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc----chhh-HHHHHHHHHHHHHhCCCCCeEEEEcC
Confidence            345555 568889999999988653211  122345667765421    1112 24568888888763344 46777664


Q ss_pred             eCCEEEEEEeccCCCch
Q 023430          186 TRSKLYLILDFINGGHL  202 (282)
Q Consensus       186 ~~~~~~lv~e~~~~g~L  202 (282)
                      .    ++||||++|..|
T Consensus       116 ~----g~I~efi~g~~l  128 (395)
T d1nw1a_         116 G----GRLEEYIPSRPL  128 (395)
T ss_dssp             T----EEEECCCCEEEC
T ss_pred             C----ceEEEEeccccC
Confidence            2    689999987543

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.01  E-value=0.0011  Score=54.35  Aligned_cols=30  Identities=20%  Similarity=0.261  Sum_probs=26.6

Q ss_pred             CCCEeeccCCCceEEcCCCcEEEEecCccc
Q 023430          234 CGIVHRDLKPENILMDSDGHVMAAHSLNSH  263 (282)
Q Consensus       234 ~~iiHrDlKp~NILl~~~~~v~l~Dfg~s~  263 (282)
                      .|+||+|+.++|||++.++..-+.||+.|.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            369999999999999988777899999885