BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023433
MVSLRFPFSFSQPSNLPHTATRSFSVAVTAAAAAATASVAGIAVYHNQKHPLVQNALNCL
FSNQSSSHFWASLSFADNSSATVVESKTGTSFPSVLGGSRKLLGIGLRKKSVLGLKNIDV
YAFGVYADHDDVKKILSEKYGNMSVAELKENKLNEDLMEADVCMTVRLQIIYNKLSIRSV
RSAFEESVGSRLQKFGGSDNKELLQKFTSQFKDEYKIPKGSVIELSKERGHVLWTTIDGK
EVGSIQSKLLCRSLLDLYIGEEPFDRKAKEDIELNLSSLIQK

High Scoring Gene Products

Symbol, full name Information P value
FAP1
fatty-acid-binding protein 1
protein from Arabidopsis thaliana 1.5e-76
FAP2
AT2G26310
protein from Arabidopsis thaliana 2.2e-27
DDB_G0276631
Uncharacterized protein YHR198C
gene from Dictyostelium discoideum 2.1e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023433
        (282 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2077229 - symbol:FAP1 "fatty-acid-binding prot...   771  1.5e-76   1
TAIR|locus:2057751 - symbol:FAP2 "fatty-acid-binding prot...   307  2.2e-27   1
DICTYBASE|DDB_G0276631 - symbol:DDB_G0276631 "Uncharacter...   165  2.1e-10   1


>TAIR|locus:2077229 [details] [associations]
            symbol:FAP1 "fatty-acid-binding protein 1" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
            [GO:0005504 "fatty acid binding" evidence=IPI] [GO:0006631 "fatty
            acid metabolic process" evidence=IMP] [GO:0009570 "chloroplast
            stroma" evidence=IDA] InterPro:IPR016087 InterPro:IPR016088
            Pfam:PF02431 GO:GO:0005739 GO:GO:0009570 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006631 GO:GO:0009941 GO:GO:0005504
            SUPFAM:SSF54626 GO:GO:0009813 GO:GO:0045430 Gene3D:3.50.70.10
            EMBL:AL138648 eggNOG:NOG131481 UniGene:At.28579 UniGene:At.48805
            EMBL:AY065149 EMBL:AY081626 EMBL:AY088229 IPI:IPI00523813
            PIR:T48106 RefSeq:NP_567140.1 PDB:4DOO PDBsum:4DOO
            ProteinModelPortal:Q9M1X2 SMR:Q9M1X2 PRIDE:Q9M1X2
            EnsemblPlants:AT3G63170.1 GeneID:825492 KEGG:ath:AT3G63170
            TAIR:At3g63170 HOGENOM:HOG000242388 InParanoid:Q9M1X2 OMA:MTVRLQI
            PhylomeDB:Q9M1X2 ProtClustDB:PLN03174 ArrayExpress:Q9M1X2
            Genevestigator:Q9M1X2 Uniprot:Q9M1X2
        Length = 279

 Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
 Identities = 158/281 (56%), Positives = 198/281 (70%)

Query:     1 MVSLRFPFSFSQPSNLPHXXXXXXXXXXXXXXXXXXXXXXXX-XXYHNQKHPLVQNALNC 59
             MVS RFPFSFSQP                                  N  HP+++ A + 
Sbjct:     1 MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAIAASRNPSHPILEWAFS- 59

Query:    60 LFSNQSSSHFWASLSFADNSSATVVESKTGTSFPSVLGGSRKLLGIGLRKKSVLGLKNID 119
               S++SS   W S++ AD S   VVE KTG SFP+ +G SR+LLG+GLRKKS+LGLKNID
Sbjct:    60 --SHRSSLSPWGSITLADES---VVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGLKNID 114

Query:   120 VYAFGVYADHDDVKKILSEKYGNMSVAELKENK-LNEDLMEADVCMTVRLQIIYNKLSIR 178
             VYAFGVYAD DDVKK++ +KY N+  +E++ NK   +DLMEAD+ MT+RLQI+Y KL+IR
Sbjct:   115 VYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVYGKLNIR 174

Query:   179 SVRSAFEESVGSRLQKFGGSDNKELLQKFTSQFKDEYKIPKGSVIELSKERGHVLWTTID 238
             SVR+AF+ESVG+RL+KFGGSDN ELLQ FTS FKDEYKIP+ S I+L+K+ GHVL   I+
Sbjct:   175 SVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVAIE 234

Query:   239 GKEVGSIQSKLLCRSLLDLYIGEEPFDRKAKEDIELNLSSL 279
             G  VGS++S LLCRS+LDLYIGEEPFD+ A+ED   N +SL
Sbjct:   235 GNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLDNAASL 275


>TAIR|locus:2057751 [details] [associations]
            symbol:FAP2 "fatty-acid-binding protein 2" species:3702
            "Arabidopsis thaliana" [GO:0042398 "cellular modified amino acid
            biosynthetic process" evidence=IEA] [GO:0005504 "fatty acid
            binding" evidence=IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] InterPro:IPR016087 Pfam:PF02431 GO:GO:0009570
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005504 GO:GO:0016872
            SUPFAM:SSF54626 EMBL:AY954800 IPI:IPI00534378 RefSeq:NP_180199.3
            UniGene:At.38913 UniGene:At.68811 ProteinModelPortal:Q58G09
            SMR:Q58G09 EnsemblPlants:AT2G26310.1 GeneID:817171
            KEGG:ath:AT2G26310 TAIR:At2g26310 eggNOG:NOG274613
            HOGENOM:HOG000241741 InParanoid:Q58G09 OMA:IEFPMLL PhylomeDB:Q58G09
            ProtClustDB:PLN03175 Genevestigator:Q58G09 Uniprot:Q58G09
        Length = 398

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 73/221 (33%), Positives = 120/221 (54%)

Query:    70 WASLSFAD-NSSATVVESKTGTSFPSVL------GGSRKLLGIGLRKKSVLGLKNIDVYA 122
             ++ LSF   + +   VE +TG  FP +L        S  L+  G R   ++ +K++ VYA
Sbjct:   177 YSGLSFQKLDWTRQSVEPRTGIEFPMLLKENASRSNSEVLVATGSRTMKIIRIKSLKVYA 236

Query:   123 FGVYADHDDVKKILSEKYGNMSVAEL-KENKLNEDLMEADVCMTVRLQIIYNKLSIRSVR 181
             FG Y     V + L  KY ++  ++L K + L +DL+  D+ M+VRL + YN L I +VR
Sbjct:   237 FGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVR 296

Query:   182 SAFEESVGSRLQKFGGSDNKELLQKFTSQFKDEYKIPKGSVIELSKERGHVLWTTIDGKE 241
               FE+S+ +RL K     +   L  F S F+ +  IP G++I+  +     L T I G  
Sbjct:   297 DVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNL 356

Query:   242 VGSIQSKLLCRSLLDLYIGEEPFDRKAKEDIELNLSSLIQK 282
             +G+++SK LCR+   +YIG+ P   + KE+I   +  +I++
Sbjct:   357 IGAVRSKDLCRAFFGMYIGDVPVSEQTKEEIGRKVVGIIKR 397


>DICTYBASE|DDB_G0276631 [details] [associations]
            symbol:DDB_G0276631 "Uncharacterized protein YHR198C"
            species:44689 "Dictyostelium discoideum" [GO:0016872
            "intramolecular lyase activity" evidence=IEA] InterPro:IPR016087
            Pfam:PF02431 dictyBase:DDB_G0276631 GO:GO:0016872 SUPFAM:SSF54626
            EMBL:AAFI02000016 RefSeq:XP_643054.1 ProteinModelPortal:Q551D9
            EnsemblProtists:DDB0202975 GeneID:8620603 KEGG:ddi:DDB_G0276631
            eggNOG:NOG131481 InParanoid:Q551D9 OMA:RLANCFF Uniprot:Q551D9
        Length = 315

 Score = 165 (63.1 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 55/206 (26%), Positives = 97/206 (47%)

Query:    83 VVESKTGTSFPSVLGGSR--KLLGIGLRKKSVLGLKNIDVYAFGVYADHDDVKKILSEKY 140
             + + KTG  FP +L       L+ IG RK S +   N++VY+ G Y + D+ K  L+E Y
Sbjct:    95 ITQIKTGFKFPKILSTEYPFNLVNIGSRKLSFI---NMNVYSIGFYINKDNAKNKLNEHY 151

Query:   141 GNMSVAELKENKLN--EDLMEADVCMTVRLQIIYNKLSIRSVRSAFEES-VGSRLQKFGG 197
              N S  +   NK+   +D+++  + +T++++    K++   +   F+ S +   L+K+  
Sbjct:   152 SNQSKEDFCMNKVEIAQDILDKGIGVTIKIRPT-RKVNWGHIYGGFQRSLIIMLLKKYDM 210

Query:   198 S-DNKE-LLQKFTSQFKDEYKIPKGSVIELSKERG--HVLWTTIDGKEVGSIQSKLLCRS 253
               D  E L+ +  S  K   +I     I+  K  G    L    + K+V  I+ K L   
Sbjct:   211 PLDEIEVLMNQLKSTLKSTQEISTTESIDFIKNDGLDPSLIILFNNKQVLEIKDKRLANC 270

Query:   254 LLDLYIGEEPFDRKAKEDIELNLSSL 279
               D Y+G+     +A+     NL S+
Sbjct:   271 FFDFYLGDNTKTPEARNQFFENLWSI 296


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      282       256   0.00086  114 3  11 22  0.49    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  177 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.82u 0.12s 24.94t   Elapsed:  00:00:01
  Total cpu time:  24.82u 0.12s 24.94t   Elapsed:  00:00:01
  Start:  Mon May 20 22:37:21 2013   End:  Mon May 20 22:37:22 2013

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