BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023437
MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVV
DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGR
DSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYA
LTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL
KGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTFEPSD

High Scoring Gene Products

Symbol, full name Information P value
AT1G74640 protein from Arabidopsis thaliana 2.5e-120

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023437
        (282 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019170 - symbol:AT1G74640 "AT1G74640" species...  1184  2.5e-120  1


>TAIR|locus:2019170 [details] [associations]
            symbol:AT1G74640 "AT1G74640" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=RCA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0009617 "response to bacterium" evidence=RCA] [GO:0009862
            "systemic acquired resistance, salicylic acid mediated signaling
            pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
            signaling pathway" evidence=RCA] [GO:0010310 "regulation of
            hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            [GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941 GO:GO:0016787
            GO:GO:0009535 UniGene:At.34855 EMBL:AY096648 EMBL:AY117161
            EMBL:AY087500 IPI:IPI00526713 RefSeq:NP_565087.1
            ProteinModelPortal:Q8L475 STRING:Q8L475 PaxDb:Q8L475 PRIDE:Q8L475
            DNASU:843803 EnsemblPlants:AT1G74640.1 GeneID:843803
            KEGG:ath:AT1G74640 TAIR:At1g74640 eggNOG:NOG268328
            HOGENOM:HOG000243139 InParanoid:Q8L475 OMA:YETLGQG PhylomeDB:Q8L475
            ProtClustDB:CLSN2689198 ArrayExpress:Q8L475 Genevestigator:Q8L475
            Uniprot:Q8L475
        Length = 370

 Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
 Identities = 224/279 (80%), Positives = 257/279 (92%)

Query:     1 MIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVV 60
             MIPTISDVSTVEEWR VA+DIVQR G VNWRATIVDWPGLGYS RPKMDY+ DVMEKFVV
Sbjct:    89 MIPTISDVSTVEEWRSVAKDIVQRDGDVNWRATIVDWPGLGYSARPKMDYDTDVMEKFVV 148

Query:    61 DLINAPDSPVSSS-ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFG 119
             D +N+P+SP+S S   DLVI GGGHAATL +RA ++ L+KP+AIAAVAPTWAGPLPIVFG
Sbjct:   149 DFMNSPESPMSQSGNDDLVIIGGGHAATLALRATQRGLLKPSAIAAVAPTWAGPLPIVFG 208

Query:   120 RDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRY 179
             RDSSM +RYG+LRGTLRAPGVGWMMYNMLVSNEK+I+SQYKSHVY++  NVT  I++SRY
Sbjct:   209 RDSSMVSRYGMLRGTLRAPGVGWMMYNMLVSNEKSIESQYKSHVYADQTNVTDAIIQSRY 268

Query:   180 ALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEA 239
              LTK+KG+RYVPAAFLTGLLDPV+SREEFLQLFADLEGKLP++V+ST+G+P+RSKAEMEA
Sbjct:   269 ELTKQKGSRYVPAAFLTGLLDPVSSREEFLQLFADLEGKLPVMVMSTKGAPKRSKAEMEA 328

Query:   240 LKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 278
             L+GAKGV+KFVEV GALLPQEEYP++VAQELY FLQ+TF
Sbjct:   329 LRGAKGVSKFVEVEGALLPQEEYPSLVAQELYNFLQETF 367


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      282       282   0.00083  115 3  11 22  0.39    34
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  186 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.25u 0.10s 22.35t   Elapsed:  00:00:01
  Total cpu time:  22.25u 0.10s 22.35t   Elapsed:  00:00:01
  Start:  Mon May 20 22:47:28 2013   End:  Mon May 20 22:47:29 2013

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